Query psy17365
Match_columns 646
No_of_seqs 510 out of 2930
Neff 6.3
Searched_HMMs 29240
Date Fri Aug 16 20:32:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17365.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17365hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2frx_A Hypothetical protein YE 100.0 4.2E-57 1.4E-61 502.5 30.9 454 44-630 9-467 (479)
2 3m4x_A NOL1/NOP2/SUN family pr 100.0 9.4E-55 3.2E-59 479.9 24.9 440 45-629 10-451 (456)
3 4fzv_A Putative methyltransfer 100.0 1.9E-55 6.4E-60 471.8 14.8 275 41-343 17-305 (359)
4 3m6w_A RRNA methylase; rRNA me 100.0 1.3E-53 4.3E-58 471.6 25.0 436 45-621 4-448 (464)
5 1ixk_A Methyltransferase; open 100.0 6.1E-50 2.1E-54 422.6 24.0 282 60-427 30-311 (315)
6 2b9e_A NOL1/NOP2/SUN domain fa 100.0 3.3E-49 1.1E-53 416.3 21.9 284 70-427 7-297 (309)
7 2yxl_A PH0851 protein, 450AA l 100.0 4.2E-45 1.4E-49 403.4 20.5 274 60-427 171-445 (450)
8 3ajd_A Putative methyltransfer 100.0 5.4E-44 1.8E-48 369.4 19.2 249 66-367 2-250 (274)
9 1sqg_A SUN protein, FMU protei 100.0 1.7E-43 5.9E-48 388.1 22.7 241 60-348 159-399 (429)
10 4dmg_A Putative uncharacterize 99.8 1.5E-18 5.3E-23 188.3 12.9 162 155-351 194-357 (393)
11 3id6_C Fibrillarin-like rRNA/T 99.7 1.5E-17 5.2E-22 168.2 14.5 140 173-355 72-218 (232)
12 1wxx_A TT1595, hypothetical pr 99.7 6.3E-17 2.2E-21 174.6 12.6 164 155-351 191-356 (382)
13 3c0k_A UPF0064 protein YCCW; P 99.6 2.2E-16 7.4E-21 171.1 10.6 166 155-351 201-370 (396)
14 2as0_A Hypothetical protein PH 99.6 5.5E-16 1.9E-20 167.8 10.8 165 155-349 197-364 (396)
15 3v97_A Ribosomal RNA large sub 99.6 8.1E-16 2.8E-20 178.3 11.5 172 117-342 500-673 (703)
16 2b78_A Hypothetical protein SM 99.6 1.4E-15 4.7E-20 164.5 9.8 171 155-357 192-366 (385)
17 3lpm_A Putative methyltransfer 99.5 4.6E-14 1.6E-18 143.5 13.7 159 166-350 37-198 (259)
18 2igt_A SAM dependent methyltra 99.5 1.1E-14 3.8E-19 154.5 9.0 164 155-346 130-299 (332)
19 3tma_A Methyltransferase; thum 99.5 1.7E-13 5.9E-18 145.8 16.6 133 170-339 196-328 (354)
20 2b3t_A Protein methyltransfera 99.5 1.1E-13 3.6E-18 142.1 11.9 143 176-342 108-254 (276)
21 3e05_A Precorrin-6Y C5,15-meth 99.5 4.3E-13 1.5E-17 130.8 14.1 147 156-349 20-166 (204)
22 2dul_A N(2),N(2)-dimethylguano 99.5 1.6E-14 5.6E-19 155.9 4.4 122 177-342 47-183 (378)
23 3k6r_A Putative transferase PH 99.5 3.2E-13 1.1E-17 140.0 13.6 130 175-350 123-256 (278)
24 3axs_A Probable N(2),N(2)-dime 99.5 3.6E-14 1.2E-18 153.7 6.4 125 176-343 51-178 (392)
25 2frn_A Hypothetical protein PH 99.5 3.1E-13 1.1E-17 139.4 12.9 128 175-348 123-254 (278)
26 1yb2_A Hypothetical protein TA 99.4 4.3E-13 1.5E-17 137.6 12.6 146 156-351 89-235 (275)
27 4df3_A Fibrillarin-like rRNA/T 99.4 4.7E-13 1.6E-17 135.3 11.7 110 173-322 73-182 (233)
28 1i1n_A Protein-L-isoaspartate 99.4 4.1E-13 1.4E-17 132.8 10.0 115 174-333 74-193 (226)
29 3evz_A Methyltransferase; NYSG 99.4 2E-12 6.7E-17 128.1 14.7 149 175-347 53-202 (230)
30 3njr_A Precorrin-6Y methylase; 99.4 2.1E-12 7.2E-17 127.0 13.2 125 169-343 47-172 (204)
31 3eey_A Putative rRNA methylase 99.4 1.9E-12 6.6E-17 125.1 12.5 138 174-340 19-159 (197)
32 3mti_A RRNA methylase; SAM-dep 99.4 2.2E-12 7.5E-17 123.4 12.3 142 175-349 20-165 (185)
33 3dou_A Ribosomal RNA large sub 99.4 9.1E-13 3.1E-17 128.7 8.7 138 175-350 23-161 (191)
34 2qm3_A Predicted methyltransfe 99.4 4E-12 1.4E-16 136.5 13.9 145 155-342 149-300 (373)
35 3hm2_A Precorrin-6Y C5,15-meth 99.3 2E-12 6.8E-17 122.2 9.9 147 156-350 5-152 (178)
36 3tfw_A Putative O-methyltransf 99.3 1.1E-12 3.8E-17 132.8 8.0 122 166-326 52-174 (248)
37 3u81_A Catechol O-methyltransf 99.3 1.3E-12 4.5E-17 129.3 8.2 145 168-350 49-194 (221)
38 2gpy_A O-methyltransferase; st 99.3 1E-12 3.5E-17 130.9 7.0 131 155-325 32-163 (233)
39 1nv8_A HEMK protein; class I a 99.3 5.1E-12 1.8E-16 131.0 11.5 137 176-340 122-263 (284)
40 1nt2_A Fibrillarin-like PRE-rR 99.3 1.4E-11 4.9E-16 121.9 13.1 134 173-351 53-193 (210)
41 4dzr_A Protein-(glutamine-N5) 99.3 4.2E-13 1.4E-17 130.1 1.4 155 176-350 29-189 (215)
42 3a27_A TYW2, uncharacterized p 99.3 6.7E-12 2.3E-16 129.1 10.1 108 173-326 115-222 (272)
43 3p9n_A Possible methyltransfer 99.3 1.8E-11 6.2E-16 117.9 11.9 112 176-325 43-156 (189)
44 1yzh_A TRNA (guanine-N(7)-)-me 99.3 6.3E-11 2.2E-15 116.5 16.0 141 176-351 40-180 (214)
45 1wy7_A Hypothetical protein PH 99.3 3.4E-11 1.2E-15 117.2 13.7 125 174-346 46-170 (207)
46 3duw_A OMT, O-methyltransferas 99.3 3.9E-12 1.3E-16 125.5 7.1 122 168-326 49-171 (223)
47 2ozv_A Hypothetical protein AT 99.3 6.8E-12 2.3E-16 128.1 9.1 143 164-321 23-169 (260)
48 1o54_A SAM-dependent O-methylt 99.3 2.5E-11 8.5E-16 124.4 12.8 132 170-351 105-237 (277)
49 3mb5_A SAM-dependent methyltra 99.3 2.2E-11 7.5E-16 122.6 12.2 127 168-342 84-211 (255)
50 2f8l_A Hypothetical protein LM 99.2 1.1E-11 3.9E-16 131.3 9.7 150 174-342 127-277 (344)
51 3gdh_A Trimethylguanosine synt 99.2 1.5E-11 5E-16 122.8 9.5 92 168-280 69-161 (241)
52 2ift_A Putative methylase HI07 99.2 1.5E-11 5.1E-16 120.4 9.2 110 177-326 53-167 (201)
53 3bt7_A TRNA (uracil-5-)-methyl 99.2 1.2E-11 4.1E-16 132.7 8.6 110 178-325 214-329 (369)
54 2yx1_A Hypothetical protein MJ 99.2 2.3E-11 8E-16 128.9 10.7 101 176-326 194-295 (336)
55 2pwy_A TRNA (adenine-N(1)-)-me 99.2 4.7E-11 1.6E-15 119.8 12.2 132 170-350 89-221 (258)
56 3grz_A L11 mtase, ribosomal pr 99.2 5.8E-11 2E-15 115.5 12.1 125 175-350 58-182 (205)
57 1inl_A Spermidine synthase; be 99.2 1.7E-11 5.7E-16 127.9 8.8 138 177-349 90-233 (296)
58 3dh0_A SAM dependent methyltra 99.2 1.2E-10 4.2E-15 113.9 14.3 139 172-351 32-179 (219)
59 3dr5_A Putative O-methyltransf 99.2 1.2E-11 4E-16 123.6 7.0 112 174-325 53-166 (221)
60 2fpo_A Methylase YHHF; structu 99.2 2.3E-11 7.8E-16 119.2 8.5 109 177-326 54-164 (202)
61 3g89_A Ribosomal RNA small sub 99.2 3.7E-11 1.3E-15 122.1 10.1 134 173-350 76-209 (249)
62 2fca_A TRNA (guanine-N(7)-)-me 99.2 8.8E-11 3E-15 116.1 12.5 117 176-322 37-153 (213)
63 1xxl_A YCGJ protein; structura 99.2 1.1E-10 3.7E-15 116.7 13.0 122 161-324 5-126 (239)
64 1i9g_A Hypothetical protein RV 99.2 7.6E-11 2.6E-15 120.2 12.0 113 169-325 91-206 (280)
65 3fpf_A Mtnas, putative unchara 99.2 1.3E-10 4.5E-15 121.2 13.7 105 172-321 117-221 (298)
66 1dus_A MJ0882; hypothetical pr 99.2 1.8E-10 6.1E-15 109.5 13.5 134 171-349 46-181 (194)
67 3f4k_A Putative methyltransfer 99.2 2.5E-10 8.5E-15 114.5 15.0 113 173-327 42-155 (257)
68 3ntv_A MW1564 protein; rossman 99.2 2.4E-11 8.3E-16 121.5 7.2 122 161-324 55-178 (232)
69 2vdv_E TRNA (guanine-N(7)-)-me 99.2 1.8E-10 6.2E-15 116.0 13.5 141 175-349 47-196 (246)
70 3r3h_A O-methyltransferase, SA 99.2 3.3E-12 1.1E-16 129.2 0.6 125 164-324 47-172 (242)
71 3c3y_A Pfomt, O-methyltransfer 99.2 1.3E-11 4.4E-16 124.2 5.0 124 168-326 61-185 (237)
72 3dxy_A TRNA (guanine-N(7)-)-me 99.2 2E-10 6.8E-15 114.4 13.5 116 177-322 34-150 (218)
73 1g8a_A Fibrillarin-like PRE-rR 99.2 3E-10 1E-14 112.4 14.4 109 174-322 70-178 (227)
74 3vc1_A Geranyl diphosphate 2-C 99.2 2.2E-10 7.5E-15 119.3 14.1 115 171-327 110-226 (312)
75 1xdz_A Methyltransferase GIDB; 99.2 7.3E-11 2.5E-15 118.3 10.0 133 174-350 67-199 (240)
76 1l3i_A Precorrin-6Y methyltran 99.2 8.1E-11 2.8E-15 111.7 9.5 131 172-350 28-159 (192)
77 2plw_A Ribosomal RNA methyltra 99.1 9.7E-11 3.3E-15 113.2 9.8 134 175-340 20-169 (201)
78 3tr6_A O-methyltransferase; ce 99.1 2.1E-11 7.3E-16 120.2 5.1 129 161-325 48-177 (225)
79 3kkz_A Uncharacterized protein 99.1 2.9E-10 1E-14 115.2 13.6 113 174-328 43-156 (267)
80 3kr9_A SAM-dependent methyltra 99.1 4.1E-10 1.4E-14 113.1 14.4 126 175-350 13-140 (225)
81 3lbf_A Protein-L-isoaspartate 99.1 2.2E-10 7.4E-15 111.7 11.9 107 170-324 70-176 (210)
82 3c3p_A Methyltransferase; NP_9 99.1 1.3E-11 4.5E-16 120.9 3.0 123 161-325 40-163 (210)
83 1sui_A Caffeoyl-COA O-methyltr 99.1 5.8E-11 2E-15 120.4 7.2 128 159-322 61-190 (247)
84 2esr_A Methyltransferase; stru 99.1 1.2E-10 4.2E-15 110.4 8.5 111 175-326 29-142 (177)
85 2yxd_A Probable cobalt-precorr 99.1 3.6E-10 1.2E-14 106.6 11.6 127 172-350 30-156 (183)
86 2bm8_A Cephalosporin hydroxyla 99.1 2.7E-11 9.1E-16 122.1 3.9 135 172-349 76-215 (236)
87 2h1r_A Dimethyladenosine trans 99.1 4.4E-11 1.5E-15 124.8 5.6 136 160-325 25-162 (299)
88 2ipx_A RRNA 2'-O-methyltransfe 99.1 4.6E-10 1.6E-14 111.7 12.7 110 173-322 73-182 (233)
89 1nkv_A Hypothetical protein YJ 99.1 3.9E-10 1.3E-14 113.0 12.2 112 172-325 31-143 (256)
90 1fbn_A MJ fibrillarin homologu 99.1 9.6E-10 3.3E-14 109.4 14.8 108 173-321 70-177 (230)
91 2b25_A Hypothetical protein; s 99.1 3.6E-10 1.2E-14 119.1 12.3 110 170-321 98-218 (336)
92 1dl5_A Protein-L-isoaspartate 99.1 3.3E-10 1.1E-14 118.7 11.7 108 170-322 68-175 (317)
93 4dcm_A Ribosomal RNA large sub 99.1 3.8E-10 1.3E-14 121.6 12.2 127 166-328 211-340 (375)
94 3lec_A NADB-rossmann superfami 99.1 1.1E-09 3.9E-14 110.2 14.4 127 175-350 19-146 (230)
95 3tm4_A TRNA (guanine N2-)-meth 99.1 4.2E-10 1.5E-14 120.9 12.0 133 175-349 215-348 (373)
96 1o9g_A RRNA methyltransferase; 99.1 2.8E-10 9.4E-15 114.7 9.3 126 176-325 50-217 (250)
97 3hem_A Cyclopropane-fatty-acyl 99.1 1.9E-09 6.6E-14 111.4 15.7 120 172-326 67-187 (302)
98 3gnl_A Uncharacterized protein 99.1 1.5E-09 5E-14 110.4 14.2 126 175-349 19-145 (244)
99 2nyu_A Putative ribosomal RNA 99.1 5.4E-10 1.8E-14 107.4 10.5 140 175-341 20-161 (196)
100 2h00_A Methyltransferase 10 do 99.0 3.1E-09 1.1E-13 106.9 16.3 150 176-342 64-229 (254)
101 1ws6_A Methyltransferase; stru 99.0 3.3E-10 1.1E-14 105.9 8.5 111 177-328 41-153 (171)
102 1vl5_A Unknown conserved prote 99.0 1.2E-09 4.1E-14 110.1 13.1 112 170-323 30-141 (260)
103 2okc_A Type I restriction enzy 99.0 4.1E-10 1.4E-14 123.7 10.3 170 156-341 150-329 (445)
104 2fhp_A Methylase, putative; al 99.0 2E-10 6.8E-15 109.2 6.8 114 176-327 43-159 (187)
105 1uwv_A 23S rRNA (uracil-5-)-me 99.0 1.9E-09 6.4E-14 118.1 15.2 88 173-276 282-369 (433)
106 3jwh_A HEN1; methyltransferase 99.0 1.7E-09 5.8E-14 106.0 13.3 113 174-324 26-143 (217)
107 1ej0_A FTSJ; methyltransferase 99.0 5.6E-10 1.9E-14 103.9 9.2 133 175-341 20-152 (180)
108 4gek_A TRNA (CMO5U34)-methyltr 99.0 1.1E-09 3.9E-14 112.0 12.1 112 175-324 68-180 (261)
109 3dtn_A Putative methyltransfer 99.0 1.5E-09 5.1E-14 107.3 12.6 111 175-326 42-152 (234)
110 2yvl_A TRMI protein, hypotheti 99.0 2.1E-09 7.1E-14 107.1 13.6 109 170-325 84-193 (248)
111 2pbf_A Protein-L-isoaspartate 99.0 1.1E-09 3.6E-14 108.3 11.3 112 174-322 77-193 (227)
112 3cbg_A O-methyltransferase; cy 99.0 2E-10 7E-15 114.8 5.7 122 168-326 63-186 (232)
113 2nxc_A L11 mtase, ribosomal pr 99.0 1.4E-09 4.6E-14 110.6 11.8 124 175-350 118-241 (254)
114 3jwg_A HEN1, methyltransferase 99.0 2.6E-09 8.8E-14 104.7 12.7 113 174-324 26-143 (219)
115 2yxe_A Protein-L-isoaspartate 99.0 1.7E-09 5.8E-14 105.7 11.4 109 171-324 71-179 (215)
116 3bus_A REBM, methyltransferase 99.0 3.2E-09 1.1E-13 107.4 13.6 113 172-325 56-169 (273)
117 3ujc_A Phosphoethanolamine N-m 99.0 2.5E-09 8.6E-14 107.2 12.5 113 172-325 50-162 (266)
118 3dmg_A Probable ribosomal RNA 99.0 1.2E-09 4.3E-14 117.8 10.9 115 176-328 232-346 (381)
119 2ar0_A M.ecoki, type I restric 99.0 5.6E-10 1.9E-14 125.8 8.5 169 156-341 148-333 (541)
120 1r18_A Protein-L-isoaspartate( 99.0 7.2E-10 2.4E-14 109.9 8.0 109 174-322 81-194 (227)
121 3dlc_A Putative S-adenosyl-L-m 99.0 3.5E-09 1.2E-13 102.6 12.8 111 173-325 40-151 (219)
122 3g5l_A Putative S-adenosylmeth 99.0 5.6E-09 1.9E-13 104.6 14.5 107 173-323 40-146 (253)
123 2ih2_A Modification methylase 99.0 1.9E-10 6.6E-15 124.2 4.0 152 170-350 32-192 (421)
124 1kpg_A CFA synthase;, cyclopro 99.0 6.2E-09 2.1E-13 106.4 14.9 112 172-325 59-171 (287)
125 2avd_A Catechol-O-methyltransf 99.0 2.6E-10 9E-15 112.6 4.5 117 172-324 64-181 (229)
126 1jg1_A PIMT;, protein-L-isoasp 99.0 1.3E-09 4.4E-14 108.8 9.4 108 169-323 83-190 (235)
127 1jsx_A Glucose-inhibited divis 99.0 2.9E-09 9.8E-14 103.3 11.3 103 177-324 65-167 (207)
128 2p41_A Type II methyltransfera 98.9 4E-10 1.4E-14 118.1 5.4 111 175-328 80-195 (305)
129 1zx0_A Guanidinoacetate N-meth 98.9 7.4E-10 2.5E-14 110.4 6.9 115 175-324 58-172 (236)
130 2jjq_A Uncharacterized RNA met 98.9 4.1E-09 1.4E-13 115.3 13.4 79 175-276 288-366 (425)
131 3ocj_A Putative exported prote 98.9 2.5E-09 8.6E-14 110.9 11.1 115 173-324 114-229 (305)
132 2o57_A Putative sarcosine dime 98.9 8.4E-09 2.9E-13 105.9 15.0 110 174-324 79-189 (297)
133 3orh_A Guanidinoacetate N-meth 98.9 9.5E-10 3.3E-14 110.4 7.3 113 175-322 58-170 (236)
134 4fsd_A Arsenic methyltransfera 98.9 4.2E-09 1.4E-13 113.2 12.8 120 172-324 78-205 (383)
135 2xyq_A Putative 2'-O-methyl tr 98.9 1.1E-09 3.6E-14 114.2 7.7 124 172-342 58-188 (290)
136 3sm3_A SAM-dependent methyltra 98.9 8.3E-09 2.8E-13 101.3 13.8 112 175-325 28-144 (235)
137 3ofk_A Nodulation protein S; N 98.9 3.1E-09 1E-13 103.8 10.4 136 172-349 46-187 (216)
138 1zq9_A Probable dimethyladenos 98.9 8.6E-10 2.9E-14 114.2 6.8 123 170-325 21-149 (285)
139 2fk8_A Methoxy mycolic acid sy 98.9 6.5E-09 2.2E-13 108.1 13.4 114 172-327 85-199 (318)
140 1vbf_A 231AA long hypothetical 98.9 2.1E-09 7.3E-14 106.2 9.1 105 171-325 64-168 (231)
141 4htf_A S-adenosylmethionine-de 98.9 8.9E-09 3E-13 105.2 13.7 107 177-324 68-175 (285)
142 3mgg_A Methyltransferase; NYSG 98.9 5E-09 1.7E-13 106.3 11.7 110 173-322 33-142 (276)
143 3ckk_A TRNA (guanine-N(7)-)-me 98.9 2E-09 7E-14 108.3 8.6 119 175-323 44-169 (235)
144 2kw5_A SLR1183 protein; struct 98.9 1E-08 3.5E-13 99.0 13.2 107 175-325 28-134 (202)
145 2xvm_A Tellurite resistance pr 98.9 6.3E-09 2.2E-13 99.6 11.4 110 172-322 27-136 (199)
146 3lcc_A Putative methyl chlorid 98.9 7.1E-09 2.4E-13 102.8 12.1 130 179-351 68-205 (235)
147 2hnk_A SAM-dependent O-methylt 98.9 9.8E-10 3.3E-14 109.9 5.6 123 172-326 55-185 (239)
148 3mq2_A 16S rRNA methyltransfer 98.9 3.6E-09 1.2E-13 103.8 9.5 114 173-322 23-140 (218)
149 1ne2_A Hypothetical protein TA 98.9 7.9E-09 2.7E-13 100.0 11.6 121 174-349 48-168 (200)
150 1ri5_A MRNA capping enzyme; me 98.9 9.1E-09 3.1E-13 105.0 12.5 114 175-324 62-176 (298)
151 2pjd_A Ribosomal RNA small sub 98.9 2.6E-09 8.9E-14 113.2 8.4 123 168-328 187-309 (343)
152 3cgg_A SAM-dependent methyltra 98.9 3.4E-08 1.2E-12 93.7 15.4 130 175-351 44-173 (195)
153 3gu3_A Methyltransferase; alph 98.9 2.3E-09 7.7E-14 110.1 7.7 113 171-324 16-128 (284)
154 2ex4_A Adrenal gland protein A 98.9 1E-08 3.5E-13 102.2 11.8 135 175-350 77-222 (241)
155 1ve3_A Hypothetical protein PH 98.9 1.5E-08 5.1E-13 99.2 12.5 108 176-324 37-144 (227)
156 3lkd_A Type I restriction-modi 98.9 6.1E-09 2.1E-13 117.3 10.8 172 155-342 195-380 (542)
157 2pxx_A Uncharacterized protein 98.8 6.2E-09 2.1E-13 100.7 9.4 122 176-325 41-162 (215)
158 3h2b_A SAM-dependent methyltra 98.8 1.9E-08 6.4E-13 97.2 12.7 127 178-351 42-180 (203)
159 2p35_A Trans-aconitate 2-methy 98.8 1.1E-08 3.9E-13 102.3 11.5 106 173-324 29-134 (259)
160 3q87_B N6 adenine specific DNA 98.8 3.6E-09 1.2E-13 100.7 7.4 126 176-351 22-147 (170)
161 3l8d_A Methyltransferase; stru 98.8 2E-08 6.8E-13 99.4 12.9 130 175-351 51-198 (242)
162 1xtp_A LMAJ004091AAA; SGPP, st 98.8 2.4E-08 8.2E-13 99.6 13.5 134 174-350 90-235 (254)
163 1mjf_A Spermidine synthase; sp 98.8 5.3E-09 1.8E-13 108.0 8.8 112 176-325 74-196 (281)
164 3hnr_A Probable methyltransfer 98.8 1.8E-08 6.1E-13 98.5 12.1 109 174-327 42-150 (220)
165 1pjz_A Thiopurine S-methyltran 98.8 8.3E-09 2.8E-13 101.0 9.4 114 174-326 19-144 (203)
166 3g5t_A Trans-aconitate 3-methy 98.8 7.1E-09 2.4E-13 107.0 9.4 115 176-324 35-151 (299)
167 3adn_A Spermidine synthase; am 98.8 1E-08 3.6E-13 106.8 10.1 113 177-324 83-200 (294)
168 2y1w_A Histone-arginine methyl 98.8 1.2E-08 4.2E-13 108.4 10.8 125 173-338 46-173 (348)
169 3bkx_A SAM-dependent methyltra 98.8 3.4E-08 1.2E-12 99.9 13.7 116 172-326 38-163 (275)
170 3e23_A Uncharacterized protein 98.8 2.7E-08 9.1E-13 96.9 12.4 122 174-342 40-172 (211)
171 3p2e_A 16S rRNA methylase; met 98.8 2.6E-09 8.9E-14 106.8 5.2 114 175-322 22-139 (225)
172 2p8j_A S-adenosylmethionine-de 98.8 2E-08 6.9E-13 97.1 11.4 111 175-325 21-131 (209)
173 3uwp_A Histone-lysine N-methyl 98.8 1.1E-08 3.6E-13 111.1 10.3 111 172-321 168-287 (438)
174 3m70_A Tellurite resistance pr 98.8 1.3E-08 4.4E-13 104.1 10.2 107 173-321 116-222 (286)
175 1m6y_A S-adenosyl-methyltransf 98.8 3.3E-09 1.1E-13 111.1 5.7 91 172-276 21-111 (301)
176 2fyt_A Protein arginine N-meth 98.8 1.1E-08 3.9E-13 108.4 9.9 122 173-333 60-184 (340)
177 3ou2_A SAM-dependent methyltra 98.8 1.8E-08 6E-13 97.9 10.4 107 174-325 43-149 (218)
178 3ccf_A Cyclopropane-fatty-acyl 98.8 3.8E-08 1.3E-12 100.3 13.2 107 171-325 51-157 (279)
179 3g2m_A PCZA361.24; SAM-depende 98.8 1.5E-08 5.1E-13 104.5 10.2 111 175-326 81-194 (299)
180 1iy9_A Spermidine synthase; ro 98.8 2.1E-08 7.3E-13 103.2 10.9 113 177-324 75-191 (275)
181 3q7e_A Protein arginine N-meth 98.8 2E-08 6.7E-13 106.9 10.7 119 175-332 64-185 (349)
182 2i7c_A Spermidine synthase; tr 98.8 1.7E-08 5.8E-13 104.3 9.7 114 176-324 77-194 (283)
183 1wzn_A SAM-dependent methyltra 98.8 5.1E-08 1.7E-12 97.4 12.8 107 175-322 39-145 (252)
184 3g07_A 7SK snRNA methylphospha 98.7 3.4E-08 1.2E-12 102.1 11.6 120 176-324 45-222 (292)
185 2yqz_A Hypothetical protein TT 98.7 2.7E-08 9.3E-13 99.6 10.3 105 174-321 36-140 (263)
186 1u2z_A Histone-lysine N-methyl 98.7 4.7E-08 1.6E-12 107.1 12.6 113 172-321 237-358 (433)
187 3i9f_A Putative type 11 methyl 98.7 3.6E-08 1.2E-12 92.5 10.2 125 173-351 13-146 (170)
188 3m33_A Uncharacterized protein 98.7 1.6E-08 5.5E-13 100.1 8.1 112 175-342 46-158 (226)
189 3khk_A Type I restriction-modi 98.7 1.6E-08 5.4E-13 114.0 8.8 176 155-342 223-418 (544)
190 3r0q_C Probable protein argini 98.7 2.1E-08 7.1E-13 107.8 9.2 120 173-332 59-181 (376)
191 2o07_A Spermidine synthase; st 98.7 2.4E-08 8.2E-13 104.5 9.2 114 176-324 94-211 (304)
192 1y8c_A S-adenosylmethionine-de 98.7 5.1E-08 1.7E-12 96.2 11.0 107 177-323 37-143 (246)
193 3bkw_A MLL3908 protein, S-aden 98.7 3E-08 1E-12 98.0 9.3 107 172-322 38-144 (243)
194 2p7i_A Hypothetical protein; p 98.7 3.5E-08 1.2E-12 97.3 9.6 102 176-324 41-143 (250)
195 1g6q_1 HnRNP arginine N-methyl 98.7 2.5E-08 8.5E-13 105.1 8.9 123 175-336 36-161 (328)
196 3d2l_A SAM-dependent methyltra 98.7 5.5E-08 1.9E-12 96.2 10.8 108 176-324 32-139 (243)
197 3dli_A Methyltransferase; PSI- 98.7 1.1E-07 3.8E-12 94.6 13.1 130 174-351 38-182 (240)
198 2pt6_A Spermidine synthase; tr 98.7 1.5E-08 5.2E-13 106.8 6.8 114 176-324 115-232 (321)
199 3e8s_A Putative SAM dependent 98.7 6.5E-08 2.2E-12 94.1 10.9 130 175-351 50-207 (227)
200 2a14_A Indolethylamine N-methy 98.7 2.8E-08 9.7E-13 101.0 8.3 143 174-351 52-236 (263)
201 2gb4_A Thiopurine S-methyltran 98.7 8.6E-08 2.9E-12 97.5 11.8 135 175-351 66-225 (252)
202 2oxt_A Nucleoside-2'-O-methylt 98.7 4.2E-08 1.4E-12 100.8 8.9 104 175-322 72-185 (265)
203 3iv6_A Putative Zn-dependent a 98.6 1.2E-07 4.3E-12 97.1 12.0 108 172-322 40-148 (261)
204 1xj5_A Spermidine synthase 1; 98.6 3.1E-08 1.1E-12 105.1 7.6 116 175-324 118-237 (334)
205 3b3j_A Histone-arginine methyl 98.6 4.4E-08 1.5E-12 108.8 9.0 120 174-334 155-277 (480)
206 3pfg_A N-methyltransferase; N, 98.6 1.7E-07 5.8E-12 94.4 12.5 103 176-322 49-151 (263)
207 2vdw_A Vaccinia virus capping 98.6 4.5E-08 1.5E-12 102.2 8.4 113 176-324 47-171 (302)
208 2wa2_A Non-structural protein 98.6 2.5E-08 8.6E-13 103.0 6.2 105 175-323 80-194 (276)
209 2qfm_A Spermine synthase; sper 98.6 5.2E-08 1.8E-12 104.1 8.7 144 177-347 188-339 (364)
210 3ll7_A Putative methyltransfer 98.6 4.8E-08 1.6E-12 106.3 8.4 82 177-276 93-176 (410)
211 3bzb_A Uncharacterized protein 98.6 2.3E-07 7.8E-12 95.5 13.1 138 175-350 77-234 (281)
212 2b2c_A Spermidine synthase; be 98.6 6.6E-08 2.3E-12 101.7 9.2 136 177-347 108-248 (314)
213 3bwc_A Spermidine synthase; SA 98.6 6.6E-08 2.3E-12 100.9 9.0 133 176-342 94-231 (304)
214 1qzz_A RDMB, aclacinomycin-10- 98.6 4.3E-07 1.5E-11 96.5 15.1 110 173-323 178-288 (374)
215 3thr_A Glycine N-methyltransfe 98.6 2.7E-08 9.4E-13 101.7 5.5 121 173-324 53-177 (293)
216 1uir_A Polyamine aminopropyltr 98.6 4.9E-08 1.7E-12 102.4 7.5 117 176-324 76-197 (314)
217 3gjy_A Spermidine synthase; AP 98.6 1.1E-07 3.7E-12 100.1 10.1 113 179-325 91-203 (317)
218 3bxo_A N,N-dimethyltransferase 98.6 2.1E-07 7.2E-12 91.7 11.6 106 176-325 39-144 (239)
219 2i62_A Nicotinamide N-methyltr 98.6 6.3E-08 2.1E-12 97.0 7.7 142 175-351 54-237 (265)
220 3bgv_A MRNA CAP guanine-N7 met 98.6 2.1E-07 7.1E-12 96.6 11.5 118 176-324 33-157 (313)
221 3ggd_A SAM-dependent methyltra 98.6 2.4E-07 8.2E-12 92.2 11.2 114 174-325 53-166 (245)
222 4hc4_A Protein arginine N-meth 98.6 1E-07 3.6E-12 102.6 9.1 117 177-333 83-202 (376)
223 3k0b_A Predicted N6-adenine-sp 98.5 1E-06 3.6E-11 95.3 16.3 92 171-273 195-317 (393)
224 3ege_A Putative methyltransfer 98.5 1.1E-07 3.7E-12 96.2 8.0 103 173-324 30-132 (261)
225 2r3s_A Uncharacterized protein 98.5 5.8E-07 2E-11 93.7 13.6 111 176-326 164-275 (335)
226 3ufb_A Type I restriction-modi 98.5 3.4E-07 1.2E-11 102.8 12.6 175 155-341 195-383 (530)
227 4hg2_A Methyltransferase type 98.5 1E-07 3.6E-12 97.2 7.4 103 177-328 39-141 (257)
228 2gs9_A Hypothetical protein TT 98.5 2.3E-07 7.7E-12 90.1 9.4 99 177-324 36-134 (211)
229 3i53_A O-methyltransferase; CO 98.5 2.4E-06 8.1E-11 89.5 17.8 113 173-326 165-278 (332)
230 3ldu_A Putative methylase; str 98.5 1.6E-06 5.4E-11 93.6 16.8 91 172-273 190-311 (385)
231 1x19_A CRTF-related protein; m 98.5 1.1E-06 3.7E-11 93.1 15.2 112 173-325 186-298 (359)
232 1tw3_A COMT, carminomycin 4-O- 98.5 1.1E-06 3.7E-11 93.0 15.1 111 173-324 179-290 (360)
233 3ldg_A Putative uncharacterize 98.5 1.1E-06 3.9E-11 94.7 15.5 91 172-273 189-310 (384)
234 3fzg_A 16S rRNA methylase; met 98.5 6.8E-08 2.3E-12 94.6 5.3 101 176-319 48-149 (200)
235 3dp7_A SAM-dependent methyltra 98.5 1.7E-06 5.7E-11 92.2 16.1 113 176-327 178-292 (363)
236 2aot_A HMT, histamine N-methyl 98.5 4E-07 1.4E-11 93.6 10.7 120 175-324 50-174 (292)
237 1p91_A Ribosomal RNA large sub 98.5 2.9E-07 1E-11 93.0 9.3 97 176-324 84-180 (269)
238 2g72_A Phenylethanolamine N-me 98.5 7.6E-07 2.6E-11 91.2 12.4 142 176-351 70-254 (289)
239 2avn_A Ubiquinone/menaquinone 98.5 2.6E-07 9E-12 93.2 8.1 101 177-324 54-154 (260)
240 3htx_A HEN1; HEN1, small RNA m 98.5 4.6E-07 1.6E-11 105.2 11.0 114 173-324 717-836 (950)
241 2oyr_A UPF0341 protein YHIQ; a 98.4 2.7E-07 9.3E-12 94.5 7.6 126 168-343 77-213 (258)
242 1yub_A Ermam, rRNA methyltrans 98.4 1.1E-08 3.7E-13 103.2 -3.5 122 168-322 20-145 (245)
243 2ip2_A Probable phenazine-spec 98.4 1.9E-06 6.6E-11 90.0 13.5 110 174-325 165-275 (334)
244 3gwz_A MMCR; methyltransferase 98.4 4.8E-06 1.6E-10 88.8 16.8 114 173-327 198-312 (369)
245 3cc8_A Putative methyltransfer 98.4 9.1E-07 3.1E-11 86.1 10.2 102 176-324 31-132 (230)
246 3s1s_A Restriction endonucleas 98.4 1.5E-07 5.3E-12 108.9 5.1 182 155-350 293-496 (878)
247 2cmg_A Spermidine synthase; tr 98.4 3.6E-07 1.2E-11 93.6 7.2 98 177-324 72-173 (262)
248 3gru_A Dimethyladenosine trans 98.4 5.6E-07 1.9E-11 93.8 8.3 82 170-273 43-124 (295)
249 3hp7_A Hemolysin, putative; st 98.4 1.4E-07 4.8E-12 98.2 3.5 99 177-321 85-184 (291)
250 3mcz_A O-methyltransferase; ad 98.3 1.8E-06 6.3E-11 90.9 11.6 116 173-326 174-291 (352)
251 1vlm_A SAM-dependent methyltra 98.3 2.4E-06 8.1E-11 83.8 11.4 95 177-324 47-141 (219)
252 2px2_A Genome polyprotein [con 98.3 2E-07 6.7E-12 94.6 3.6 117 175-334 71-192 (269)
253 2r6z_A UPF0341 protein in RSP 98.3 1.3E-07 4.3E-12 96.8 2.2 90 168-273 74-171 (258)
254 1qam_A ERMC' methyltransferase 98.3 1.3E-06 4.4E-11 88.2 9.5 82 171-274 24-105 (244)
255 3v97_A Ribosomal RNA large sub 98.3 3.6E-06 1.2E-10 97.6 13.4 128 172-322 185-347 (703)
256 3eld_A Methyltransferase; flav 98.3 6.2E-07 2.1E-11 92.8 5.8 133 176-347 80-215 (300)
257 2zfu_A Nucleomethylin, cerebra 98.3 1.5E-06 5.1E-11 84.6 8.1 113 174-350 64-176 (215)
258 2qy6_A UPF0209 protein YFCK; s 98.3 2.4E-06 8E-11 87.4 9.6 138 175-349 58-231 (257)
259 3sso_A Methyltransferase; macr 98.2 1.2E-06 4E-11 94.8 7.6 105 177-324 216-326 (419)
260 3evf_A RNA-directed RNA polyme 98.2 8.3E-07 2.8E-11 91.1 5.9 134 175-347 72-208 (277)
261 3gcz_A Polyprotein; flavivirus 98.2 5.4E-07 1.9E-11 92.6 4.3 134 175-347 88-225 (282)
262 2qe6_A Uncharacterized protein 98.2 1.3E-05 4.3E-10 82.3 13.8 118 177-325 77-199 (274)
263 3opn_A Putative hemolysin; str 98.2 8.2E-07 2.8E-11 89.2 4.5 99 177-321 37-136 (232)
264 3tqs_A Ribosomal RNA small sub 98.2 1.7E-06 5.9E-11 88.2 6.6 85 170-273 22-106 (255)
265 4e2x_A TCAB9; kijanose, tetron 98.2 2.1E-06 7E-11 92.8 7.3 132 172-351 102-251 (416)
266 3cvo_A Methyltransferase-like 98.1 1.4E-05 4.8E-10 78.8 11.5 122 177-339 30-169 (202)
267 1af7_A Chemotaxis receptor met 98.1 7.8E-06 2.7E-10 84.3 8.7 111 177-321 105-251 (274)
268 4auk_A Ribosomal RNA large sub 98.0 3.7E-06 1.3E-10 90.0 5.8 76 175-277 209-284 (375)
269 3lst_A CALO1 methyltransferase 98.0 2E-05 6.8E-10 83.2 11.3 109 173-325 180-289 (348)
270 3fut_A Dimethyladenosine trans 98.0 4.6E-06 1.6E-10 85.9 5.9 82 171-275 41-122 (271)
271 4a6d_A Hydroxyindole O-methylt 98.0 4E-05 1.4E-09 81.4 12.2 114 173-327 175-288 (353)
272 3tka_A Ribosomal RNA small sub 97.9 5.3E-06 1.8E-10 87.5 4.0 90 172-276 52-141 (347)
273 3giw_A Protein of unknown func 97.9 3.5E-05 1.2E-09 79.4 10.0 117 179-325 80-203 (277)
274 3r24_A NSP16, 2'-O-methyl tran 97.9 1.7E-05 5.7E-10 81.8 6.8 118 174-338 106-230 (344)
275 3ftd_A Dimethyladenosine trans 97.9 1.1E-05 3.7E-10 81.9 5.4 82 171-274 25-106 (249)
276 3uzu_A Ribosomal RNA small sub 97.9 1.9E-05 6.6E-10 81.5 7.3 88 171-273 36-124 (279)
277 1wg8_A Predicted S-adenosylmet 97.8 8.6E-06 3E-10 84.0 4.2 85 172-275 17-101 (285)
278 3frh_A 16S rRNA methylase; met 97.8 9E-05 3.1E-09 75.0 10.9 100 176-319 104-203 (253)
279 3p8z_A Mtase, non-structural p 97.8 2.8E-05 9.4E-10 78.0 6.7 127 175-343 76-207 (267)
280 3lcv_B Sisomicin-gentamicin re 97.7 3.6E-05 1.2E-09 78.7 6.2 101 178-319 133-233 (281)
281 3reo_A (ISO)eugenol O-methyltr 97.7 0.0001 3.5E-09 78.6 9.7 104 175-326 201-304 (368)
282 3p9c_A Caffeic acid O-methyltr 97.6 0.00014 4.6E-09 77.6 9.6 104 175-326 199-302 (364)
283 3o4f_A Spermidine synthase; am 97.6 0.00043 1.5E-08 72.0 12.8 115 170-320 77-196 (294)
284 1fp2_A Isoflavone O-methyltran 97.6 0.00012 4.1E-09 77.2 8.7 104 174-325 185-291 (352)
285 1qyr_A KSGA, high level kasuga 97.6 2.2E-05 7.6E-10 79.8 2.8 87 172-275 16-102 (252)
286 1fp1_D Isoliquiritigenin 2'-O- 97.6 9.1E-05 3.1E-09 78.8 7.5 102 175-324 207-308 (372)
287 1zg3_A Isoflavanone 4'-O-methy 97.5 0.00028 9.6E-09 74.6 10.5 103 175-325 191-296 (358)
288 4azs_A Methyltransferase WBDD; 97.5 0.00012 4.2E-09 82.6 6.8 75 177-269 66-140 (569)
289 3lkz_A Non-structural protein 97.4 0.00025 8.5E-09 73.2 8.3 127 175-343 92-225 (321)
290 3g7u_A Cytosine-specific methy 97.4 0.0029 9.9E-08 67.9 15.8 87 179-281 3-89 (376)
291 2c7p_A Modification methylase 97.3 0.0018 6.2E-08 68.2 13.8 79 178-281 11-89 (327)
292 3ua3_A Protein arginine N-meth 97.3 0.00027 9.2E-09 81.0 7.6 133 179-337 411-551 (745)
293 2ld4_A Anamorsin; methyltransf 97.3 0.00013 4.3E-09 68.7 4.1 113 173-342 8-127 (176)
294 2wk1_A NOVP; transferase, O-me 97.3 0.00045 1.5E-08 71.4 8.5 136 177-350 107-271 (282)
295 4gqb_A Protein arginine N-meth 97.3 0.00042 1.4E-08 79.1 8.9 122 179-336 359-483 (637)
296 3c6k_A Spermine synthase; sper 97.2 0.00043 1.5E-08 74.2 7.7 137 177-341 205-350 (381)
297 1g55_A DNA cytosine methyltran 97.2 0.00042 1.4E-08 73.4 7.4 84 179-281 3-86 (343)
298 2oo3_A Protein involved in cat 97.2 5.5E-05 1.9E-09 78.1 0.5 123 177-341 91-213 (283)
299 2qrv_A DNA (cytosine-5)-methyl 96.7 0.0032 1.1E-07 65.4 8.2 86 176-280 14-100 (295)
300 3ubt_Y Modification methylase 96.5 0.013 4.6E-07 60.8 11.8 79 179-281 1-79 (331)
301 3vyw_A MNMC2; tRNA wobble urid 96.4 0.013 4.5E-07 61.1 10.5 131 177-348 96-243 (308)
302 4h0n_A DNMT2; SAH binding, tra 96.3 0.0076 2.6E-07 63.6 8.1 82 180-280 5-86 (333)
303 2zig_A TTHA0409, putative modi 96.1 0.0098 3.3E-07 61.4 7.6 59 176-244 234-292 (297)
304 3qv2_A 5-cytosine DNA methyltr 95.9 0.0083 2.8E-07 63.2 6.0 79 178-276 10-89 (327)
305 2py6_A Methyltransferase FKBM; 95.7 0.023 7.9E-07 61.5 8.8 69 171-245 220-292 (409)
306 1i4w_A Mitochondrial replicati 95.5 0.02 6.8E-07 60.9 7.3 60 177-247 58-117 (353)
307 2k4m_A TR8_protein, UPF0146 pr 95.5 0.014 4.8E-07 54.5 5.3 63 176-272 34-99 (153)
308 3s2e_A Zinc-containing alcohol 95.3 0.032 1.1E-06 58.1 7.9 100 173-321 162-262 (340)
309 1pl8_A Human sorbitol dehydrog 95.1 0.035 1.2E-06 58.3 7.6 101 173-321 167-272 (356)
310 4ej6_A Putative zinc-binding d 95.1 0.051 1.7E-06 57.6 8.9 105 173-321 178-283 (370)
311 1g60_A Adenine-specific methyl 95.1 0.023 8E-07 57.3 5.8 50 175-234 210-259 (260)
312 3fpc_A NADP-dependent alcohol 95.0 0.028 9.5E-07 59.0 6.4 102 173-320 162-264 (352)
313 1f8f_A Benzyl alcohol dehydrog 95.0 0.046 1.6E-06 57.7 8.2 102 173-321 186-288 (371)
314 3me5_A Cytosine-specific methy 95.0 0.021 7.1E-07 63.2 5.6 93 177-280 87-186 (482)
315 3two_A Mannitol dehydrogenase; 94.7 0.052 1.8E-06 56.8 7.7 91 174-321 173-264 (348)
316 2dph_A Formaldehyde dismutase; 94.7 0.048 1.7E-06 58.2 7.3 50 173-234 181-231 (398)
317 3pvc_A TRNA 5-methylaminomethy 94.5 0.03 1E-06 64.4 5.5 138 176-344 57-226 (689)
318 3uko_A Alcohol dehydrogenase c 94.5 0.057 2E-06 57.2 7.2 102 173-321 189-294 (378)
319 1p0f_A NADP-dependent alcohol 94.3 0.074 2.5E-06 56.2 7.6 102 173-321 187-292 (373)
320 1kol_A Formaldehyde dehydrogen 94.1 0.042 1.4E-06 58.6 5.3 51 173-235 181-232 (398)
321 1e3i_A Alcohol dehydrogenase, 94.1 0.079 2.7E-06 56.0 7.3 102 173-321 191-296 (376)
322 3b5i_A S-adenosyl-L-methionine 94.0 0.22 7.4E-06 53.3 10.5 52 178-229 53-111 (374)
323 2jhf_A Alcohol dehydrogenase E 94.0 0.089 3.1E-06 55.5 7.5 102 173-321 187-292 (374)
324 3jv7_A ADH-A; dehydrogenase, n 94.0 0.073 2.5E-06 55.5 6.8 101 174-321 168-269 (345)
325 1cdo_A Alcohol dehydrogenase; 94.0 0.085 2.9E-06 55.7 7.3 102 173-321 188-293 (374)
326 2fzw_A Alcohol dehydrogenase c 93.9 0.09 3.1E-06 55.4 7.4 102 173-321 186-291 (373)
327 1e3j_A NADP(H)-dependent ketos 93.6 0.17 5.9E-06 52.8 8.7 105 173-321 164-270 (352)
328 3m6i_A L-arabinitol 4-dehydrog 93.4 0.083 2.8E-06 55.5 6.0 104 173-321 175-282 (363)
329 4dvj_A Putative zinc-dependent 93.2 0.11 3.7E-06 54.8 6.6 97 177-321 171-269 (363)
330 3uog_A Alcohol dehydrogenase; 93.2 0.14 4.7E-06 54.0 7.2 101 173-321 185-286 (363)
331 1uuf_A YAHK, zinc-type alcohol 93.1 0.09 3.1E-06 55.7 5.7 95 174-320 191-286 (369)
332 3swr_A DNA (cytosine-5)-methyl 92.9 0.25 8.7E-06 59.1 9.7 89 178-280 540-635 (1002)
333 2efj_A 3,7-dimethylxanthine me 92.8 1.2 4.1E-05 47.7 13.8 152 178-339 53-246 (384)
334 3ip1_A Alcohol dehydrogenase, 92.6 0.38 1.3E-05 51.4 9.8 51 174-236 210-261 (404)
335 1vj0_A Alcohol dehydrogenase, 92.4 0.16 5.5E-06 53.8 6.6 102 173-320 190-296 (380)
336 4a2c_A Galactitol-1-phosphate 92.4 0.41 1.4E-05 49.6 9.5 103 173-321 156-259 (346)
337 2zig_A TTHA0409, putative modi 92.1 0.066 2.3E-06 55.0 2.9 79 235-323 20-98 (297)
338 4ft4_B DNA (cytosine-5)-methyl 91.6 0.53 1.8E-05 54.8 10.1 48 178-228 212-259 (784)
339 3ps9_A TRNA 5-methylaminomethy 91.4 0.48 1.6E-05 54.1 9.4 135 177-343 66-233 (676)
340 4dkj_A Cytosine-specific methy 91.2 0.57 2E-05 50.5 9.2 45 179-230 11-59 (403)
341 1piw_A Hypothetical zinc-type 90.9 0.13 4.6E-06 53.9 3.8 51 173-236 175-226 (360)
342 2d8a_A PH0655, probable L-thre 90.9 0.37 1.3E-05 50.2 7.2 102 173-321 164-266 (348)
343 3goh_A Alcohol dehydrogenase, 90.8 0.15 5.1E-06 52.4 4.0 90 173-321 138-228 (315)
344 1rjw_A ADH-HT, alcohol dehydro 90.8 0.48 1.6E-05 49.2 7.9 99 174-321 161-260 (339)
345 4eez_A Alcohol dehydrogenase 1 90.6 0.58 2E-05 48.4 8.3 103 173-321 159-262 (348)
346 2h6e_A ADH-4, D-arabinose 1-de 90.5 0.21 7.1E-06 52.0 4.8 99 174-321 168-268 (344)
347 3av4_A DNA (cytosine-5)-methyl 90.5 0.59 2E-05 57.5 9.3 89 178-280 851-946 (1330)
348 1boo_A Protein (N-4 cytosine-s 89.9 0.29 9.9E-06 51.0 5.3 73 235-323 13-85 (323)
349 1m6e_X S-adenosyl-L-methionnin 89.3 0.37 1.3E-05 51.3 5.6 137 179-325 53-212 (359)
350 2eih_A Alcohol dehydrogenase; 89.0 0.64 2.2E-05 48.2 7.1 101 173-321 162-264 (343)
351 3gms_A Putative NADPH:quinone 88.8 0.61 2.1E-05 48.3 6.8 51 173-236 140-192 (340)
352 3fbg_A Putative arginate lyase 88.2 0.38 1.3E-05 50.1 4.8 95 177-320 150-246 (346)
353 2b5w_A Glucose dehydrogenase; 88.0 0.42 1.4E-05 50.0 5.0 99 174-321 163-272 (357)
354 3qwb_A Probable quinone oxidor 87.7 0.85 2.9E-05 47.1 7.0 100 173-320 144-245 (334)
355 1eg2_A Modification methylase 87.3 0.55 1.9E-05 48.9 5.3 49 175-233 240-291 (319)
356 3jyn_A Quinone oxidoreductase; 87.0 0.92 3.2E-05 46.7 6.8 101 173-321 136-238 (325)
357 4dup_A Quinone oxidoreductase; 86.8 1.5 5.2E-05 45.7 8.4 102 173-321 163-264 (353)
358 1boo_A Protein (N-4 cytosine-s 86.4 0.47 1.6E-05 49.3 4.2 61 175-246 250-310 (323)
359 4eye_A Probable oxidoreductase 86.3 0.86 2.9E-05 47.4 6.1 99 173-320 155-255 (342)
360 1pqw_A Polyketide synthase; ro 86.0 1.2 4.1E-05 42.0 6.5 52 173-235 34-85 (198)
361 2dq4_A L-threonine 3-dehydroge 85.9 0.5 1.7E-05 49.0 4.1 101 172-321 160-261 (343)
362 1g60_A Adenine-specific methyl 85.1 0.46 1.6E-05 47.7 3.2 71 238-324 6-76 (260)
363 4b7c_A Probable oxidoreductase 85.1 1.3 4.3E-05 45.7 6.7 100 173-320 145-246 (336)
364 2j3h_A NADP-dependent oxidored 84.8 1.2 4.2E-05 46.0 6.4 100 173-320 151-253 (345)
365 2cf5_A Atccad5, CAD, cinnamyl 84.7 0.56 1.9E-05 49.1 3.8 97 174-321 176-274 (357)
366 1xa0_A Putative NADPH dependen 84.1 0.91 3.1E-05 46.7 5.0 50 174-236 145-197 (328)
367 1v3u_A Leukotriene B4 12- hydr 83.5 1.7 5.7E-05 44.7 6.7 52 173-235 141-192 (333)
368 1qor_A Quinone oxidoreductase; 83.4 1.6 5.4E-05 44.8 6.4 104 172-321 135-238 (327)
369 2hcy_A Alcohol dehydrogenase 1 83.3 0.89 3.1E-05 47.2 4.6 101 174-321 166-268 (347)
370 1jvb_A NAD(H)-dependent alcoho 83.0 1.3 4.5E-05 45.9 5.8 51 173-235 166-218 (347)
371 3tos_A CALS11; methyltransfera 82.8 1.9 6.6E-05 43.6 6.6 141 177-349 70-245 (257)
372 4fs3_A Enoyl-[acyl-carrier-pro 82.7 2.3 8E-05 42.2 7.2 138 177-321 5-145 (256)
373 2j8z_A Quinone oxidoreductase; 82.6 2.1 7.3E-05 44.5 7.2 52 173-235 158-209 (354)
374 3nx4_A Putative oxidoreductase 81.2 2.2 7.7E-05 43.5 6.6 95 174-321 142-240 (324)
375 2c0c_A Zinc binding alcohol de 81.1 2 6.9E-05 44.9 6.3 100 173-321 159-260 (362)
376 1yqd_A Sinapyl alcohol dehydro 81.0 1.6 5.5E-05 45.8 5.5 51 174-235 183-234 (366)
377 3oig_A Enoyl-[acyl-carrier-pro 81.0 3.4 0.00012 40.7 7.7 136 178-322 7-147 (266)
378 1wly_A CAAR, 2-haloacrylate re 80.9 2.7 9.2E-05 43.2 7.1 100 173-320 141-242 (333)
379 1eg2_A Modification methylase 79.7 1 3.5E-05 46.9 3.4 70 237-326 39-109 (319)
380 1tt7_A YHFP; alcohol dehydroge 79.3 1.2 4.1E-05 45.8 3.8 50 174-236 146-198 (330)
381 1wma_A Carbonyl reductase [NAD 79.1 3 0.0001 40.8 6.5 135 178-323 4-139 (276)
382 1yb5_A Quinone oxidoreductase; 78.7 3.3 0.00011 43.2 7.0 52 173-235 166-217 (351)
383 3gaz_A Alcohol dehydrogenase s 78.7 2.2 7.7E-05 44.2 5.7 97 173-320 146-244 (343)
384 1xu9_A Corticosteroid 11-beta- 77.6 4.9 0.00017 40.1 7.7 86 178-270 28-113 (286)
385 3krt_A Crotonyl COA reductase; 77.0 2.8 9.7E-05 45.3 6.1 51 173-236 224-276 (456)
386 1sqw_A Saccharomyces cerevisia 76.8 2.8 9.5E-05 40.4 5.2 127 468-615 12-144 (188)
387 4a0s_A Octenoyl-COA reductase/ 76.6 3.5 0.00012 44.3 6.6 54 173-237 216-269 (447)
388 3k31_A Enoyl-(acyl-carrier-pro 76.4 4.9 0.00017 40.6 7.4 147 162-322 17-168 (296)
389 1iz0_A Quinone oxidoreductase; 75.6 0.99 3.4E-05 45.8 1.8 91 175-320 123-216 (302)
390 1ja9_A 4HNR, 1,3,6,8-tetrahydr 75.4 4.9 0.00017 39.4 6.9 130 178-322 21-155 (274)
391 3tjr_A Short chain dehydrogena 74.3 8.6 0.00029 38.9 8.6 131 177-322 30-167 (301)
392 1zsy_A Mitochondrial 2-enoyl t 74.0 5.3 0.00018 41.5 7.0 56 173-237 163-220 (357)
393 3rih_A Short chain dehydrogena 73.4 3.4 0.00012 41.9 5.3 88 178-272 41-128 (293)
394 3o38_A Short chain dehydrogena 73.2 7.4 0.00025 38.2 7.6 132 177-322 21-160 (266)
395 2cdc_A Glucose dehydrogenase g 73.2 4.4 0.00015 42.3 6.2 93 178-321 181-277 (366)
396 2hwk_A Helicase NSP2; rossman 72.6 2.1 7.3E-05 43.9 3.3 75 262-348 205-279 (320)
397 3gqv_A Enoyl reductase; medium 72.4 8.6 0.00029 40.2 8.2 101 176-327 163-266 (371)
398 2zb4_A Prostaglandin reductase 71.0 6.6 0.00023 40.6 6.9 103 173-320 154-258 (357)
399 3grk_A Enoyl-(acyl-carrier-pro 70.7 14 0.00048 37.2 9.1 150 160-322 15-169 (293)
400 4da9_A Short-chain dehydrogena 70.4 12 0.00042 37.3 8.5 88 177-272 28-116 (280)
401 3tqh_A Quinone oxidoreductase; 69.9 5.9 0.0002 40.4 6.1 93 173-320 148-243 (321)
402 3gaf_A 7-alpha-hydroxysteroid 69.1 11 0.00037 37.1 7.7 133 178-322 12-146 (256)
403 3pxx_A Carveol dehydrogenase; 68.8 13 0.00046 36.7 8.4 133 177-322 9-153 (287)
404 3o26_A Salutaridine reductase; 68.3 50 0.0017 32.5 12.6 89 178-273 12-101 (311)
405 3ojo_A CAP5O; rossmann fold, c 68.0 36 0.0012 36.7 12.1 125 187-350 18-160 (431)
406 3lf2_A Short chain oxidoreduct 67.3 14 0.00048 36.4 8.1 130 178-321 8-144 (265)
407 2vn8_A Reticulon-4-interacting 66.7 9 0.00031 40.0 6.9 96 175-320 181-278 (375)
408 3pi7_A NADH oxidoreductase; gr 66.7 7.8 0.00027 40.0 6.3 101 176-321 162-262 (349)
409 3nyw_A Putative oxidoreductase 66.0 11 0.00037 36.9 6.9 88 178-272 7-96 (250)
410 3pk0_A Short-chain dehydrogena 65.7 16 0.00055 35.9 8.2 88 178-272 10-97 (262)
411 1gu7_A Enoyl-[acyl-carrier-pro 65.6 8.8 0.0003 39.7 6.5 56 173-237 162-220 (364)
412 3trk_A Nonstructural polyprote 65.5 3.2 0.00011 42.2 2.8 70 262-342 210-279 (324)
413 4a27_A Synaptic vesicle membra 63.5 2.3 8E-05 44.1 1.5 100 173-321 138-237 (349)
414 3i1j_A Oxidoreductase, short c 63.3 20 0.00067 34.5 8.2 133 177-322 13-153 (247)
415 3ioy_A Short-chain dehydrogena 63.2 15 0.00052 37.4 7.7 88 178-272 8-96 (319)
416 3r1i_A Short-chain type dehydr 63.1 14 0.00046 36.9 7.1 101 164-273 19-119 (276)
417 3l77_A Short-chain alcohol deh 63.0 25 0.00085 33.5 8.8 86 179-272 3-89 (235)
418 4egf_A L-xylulose reductase; s 62.9 15 0.00053 36.1 7.4 87 178-272 20-107 (266)
419 3g79_A NDP-N-acetyl-D-galactos 62.6 25 0.00085 38.5 9.6 134 179-350 19-179 (478)
420 3fwz_A Inner membrane protein 62.5 28 0.00097 30.7 8.5 72 180-272 9-80 (140)
421 1fmc_A 7 alpha-hydroxysteroid 62.2 37 0.0013 32.5 10.0 87 178-272 11-97 (255)
422 1mxh_A Pteridine reductase 2; 62.1 96 0.0033 30.2 13.2 62 178-247 11-74 (276)
423 2p38_A Protein involved in rib 61.3 33 0.0011 32.2 8.9 131 468-624 18-156 (166)
424 3lyl_A 3-oxoacyl-(acyl-carrier 60.8 32 0.0011 33.0 9.2 87 178-272 5-91 (247)
425 3f1l_A Uncharacterized oxidore 60.5 25 0.00084 34.2 8.4 89 177-272 11-101 (252)
426 3qiv_A Short-chain dehydrogena 59.8 23 0.00078 34.2 8.0 87 178-272 9-95 (253)
427 1yxm_A Pecra, peroxisomal tran 59.2 23 0.0008 35.2 8.1 88 178-272 18-109 (303)
428 1yb1_A 17-beta-hydroxysteroid 59.0 26 0.00088 34.5 8.3 87 178-272 31-117 (272)
429 2ae2_A Protein (tropinone redu 58.8 25 0.00084 34.3 8.1 87 178-272 9-96 (260)
430 4eso_A Putative oxidoreductase 58.6 9.3 0.00032 37.6 4.9 128 177-322 7-138 (255)
431 1xhl_A Short-chain dehydrogena 58.5 27 0.00093 35.1 8.5 88 178-272 26-115 (297)
432 3rku_A Oxidoreductase YMR226C; 58.5 50 0.0017 33.0 10.4 91 178-272 33-124 (287)
433 3rkr_A Short chain oxidoreduct 58.4 29 0.00099 33.9 8.5 88 177-272 28-115 (262)
434 1zem_A Xylitol dehydrogenase; 58.2 21 0.0007 35.0 7.4 87 178-272 7-93 (262)
435 4gua_A Non-structural polyprot 58.1 9.8 0.00033 42.5 5.2 71 261-342 219-289 (670)
436 1geg_A Acetoin reductase; SDR 58.0 26 0.0009 34.0 8.1 85 180-272 4-88 (256)
437 3h7a_A Short chain dehydrogena 57.1 15 0.0005 36.0 6.0 87 178-273 7-93 (252)
438 4dry_A 3-oxoacyl-[acyl-carrier 56.9 17 0.00057 36.3 6.5 88 178-272 33-120 (281)
439 3is3_A 17BETA-hydroxysteroid d 56.8 34 0.0012 33.6 8.7 131 178-323 18-153 (270)
440 3v2g_A 3-oxoacyl-[acyl-carrier 56.7 31 0.0011 34.2 8.4 132 177-323 30-166 (271)
441 2bgk_A Rhizome secoisolaricire 56.5 27 0.00092 34.0 7.9 85 177-271 15-100 (278)
442 3cxt_A Dehydrogenase with diff 56.5 26 0.00089 35.2 7.9 87 178-272 34-120 (291)
443 2uvd_A 3-oxoacyl-(acyl-carrier 56.1 31 0.0011 33.2 8.2 87 178-272 4-91 (246)
444 2jah_A Clavulanic acid dehydro 55.9 29 0.00099 33.6 8.0 87 178-272 7-93 (247)
445 1edo_A Beta-keto acyl carrier 55.8 34 0.0012 32.6 8.4 85 180-272 3-88 (244)
446 2b4q_A Rhamnolipids biosynthes 55.7 25 0.00085 34.9 7.6 87 177-272 28-114 (276)
447 3f9i_A 3-oxoacyl-[acyl-carrier 55.7 57 0.0019 31.2 10.0 84 177-275 13-96 (249)
448 3ftp_A 3-oxoacyl-[acyl-carrier 55.1 26 0.0009 34.6 7.6 87 178-272 28-114 (270)
449 1y1p_A ARII, aldehyde reductas 55.0 1.7E+02 0.0057 28.9 15.8 83 177-273 10-93 (342)
450 1w6u_A 2,4-dienoyl-COA reducta 55.0 27 0.00093 34.6 7.7 88 178-272 26-113 (302)
451 3svt_A Short-chain type dehydr 54.9 30 0.001 34.1 8.0 88 178-272 11-100 (281)
452 3ek2_A Enoyl-(acyl-carrier-pro 54.5 11 0.00037 36.8 4.6 137 176-322 12-153 (271)
453 2vhw_A Alanine dehydrogenase; 54.4 20 0.00068 37.8 6.9 102 177-322 167-268 (377)
454 3tfo_A Putative 3-oxoacyl-(acy 54.4 28 0.00095 34.5 7.6 87 178-272 4-90 (264)
455 4g81_D Putative hexonate dehyd 54.2 34 0.0012 34.1 8.2 87 178-272 9-95 (255)
456 3u5t_A 3-oxoacyl-[acyl-carrier 54.0 18 0.00063 35.7 6.2 135 178-323 27-162 (267)
457 1xkq_A Short-chain reductase f 53.4 31 0.001 34.1 7.8 88 178-272 6-95 (280)
458 3ucx_A Short chain dehydrogena 53.3 33 0.0011 33.5 8.0 87 177-271 10-96 (264)
459 4ibo_A Gluconate dehydrogenase 52.8 29 0.001 34.3 7.5 87 178-272 26-112 (271)
460 3gg2_A Sugar dehydrogenase, UD 52.8 91 0.0031 33.6 11.9 117 187-339 9-138 (450)
461 4e6p_A Probable sorbitol dehyd 52.6 33 0.0011 33.4 7.8 87 177-274 7-93 (259)
462 3v2h_A D-beta-hydroxybutyrate 52.4 26 0.0009 34.8 7.1 89 178-273 25-114 (281)
463 1gee_A Glucose 1-dehydrogenase 52.3 32 0.0011 33.2 7.6 87 178-272 7-94 (261)
464 4ezb_A Uncharacterized conserv 51.8 46 0.0016 33.9 9.0 109 180-342 26-139 (317)
465 3pgx_A Carveol dehydrogenase; 51.6 28 0.00097 34.3 7.2 131 177-322 14-164 (280)
466 1vl8_A Gluconate 5-dehydrogena 51.4 33 0.0011 33.8 7.6 87 178-272 21-108 (267)
467 1xg5_A ARPG836; short chain de 51.2 33 0.0011 33.7 7.6 87 178-271 32-119 (279)
468 3sju_A Keto reductase; short-c 51.1 28 0.00095 34.5 7.0 90 178-275 24-113 (279)
469 4dcm_A Ribosomal RNA large sub 50.9 37 0.0013 35.7 8.3 94 177-320 38-134 (375)
470 3oid_A Enoyl-[acyl-carrier-pro 50.7 36 0.0012 33.3 7.7 87 178-272 4-91 (258)
471 3ppi_A 3-hydroxyacyl-COA dehyd 50.7 1E+02 0.0035 30.0 11.2 81 178-270 30-110 (281)
472 3sx2_A Putative 3-ketoacyl-(ac 50.0 35 0.0012 33.5 7.6 88 177-272 12-111 (278)
473 3imf_A Short chain dehydrogena 49.3 33 0.0011 33.4 7.2 87 178-272 6-92 (257)
474 3oec_A Carveol dehydrogenase ( 49.0 43 0.0015 33.9 8.2 91 177-275 45-147 (317)
475 3r3s_A Oxidoreductase; structu 48.8 31 0.0011 34.5 7.1 134 177-322 48-185 (294)
476 2gn4_A FLAA1 protein, UDP-GLCN 48.7 55 0.0019 33.4 9.0 81 177-272 20-100 (344)
477 1wg8_A Predicted S-adenosylmet 48.2 12 0.00041 38.3 3.7 37 302-341 213-249 (285)
478 1e7w_A Pteridine reductase; di 48.2 2.1E+02 0.0072 28.1 13.2 63 178-248 9-73 (291)
479 4a7p_A UDP-glucose dehydrogena 48.1 51 0.0017 35.7 9.0 122 184-340 12-146 (446)
480 3ijr_A Oxidoreductase, short c 47.1 40 0.0014 33.7 7.5 134 177-322 46-182 (291)
481 1cyd_A Carbonyl reductase; sho 47.0 95 0.0033 29.3 10.0 80 177-272 6-85 (244)
482 2pd6_A Estradiol 17-beta-dehyd 46.9 22 0.00076 34.4 5.4 63 178-247 7-75 (264)
483 2rhc_B Actinorhodin polyketide 46.8 80 0.0028 31.0 9.7 87 178-272 22-108 (277)
484 2hq1_A Glucose/ribitol dehydro 46.8 43 0.0015 31.9 7.4 87 178-272 5-92 (247)
485 3awd_A GOX2181, putative polyo 46.7 42 0.0015 32.2 7.5 87 178-272 13-99 (260)
486 1uls_A Putative 3-oxoacyl-acyl 46.7 33 0.0011 33.2 6.7 82 178-272 5-86 (245)
487 1ae1_A Tropinone reductase-I; 46.4 50 0.0017 32.4 8.0 87 178-272 21-108 (273)
488 2p91_A Enoyl-[acyl-carrier-pro 46.2 35 0.0012 33.7 6.9 88 177-272 20-108 (285)
489 4dqx_A Probable oxidoreductase 46.2 43 0.0015 33.2 7.6 127 178-322 27-159 (277)
490 2vz8_A Fatty acid synthase; tr 46.2 14 0.00049 48.6 4.9 102 174-320 1664-1768(2512)
491 3tsc_A Putative oxidoreductase 46.1 44 0.0015 32.9 7.6 88 177-272 10-110 (277)
492 2ehd_A Oxidoreductase, oxidore 46.0 32 0.0011 32.7 6.3 82 179-272 6-87 (234)
493 3h2s_A Putative NADH-flavin re 46.0 68 0.0023 29.8 8.6 70 180-272 2-71 (224)
494 1g0o_A Trihydroxynaphthalene r 46.0 47 0.0016 32.7 7.8 130 178-322 29-163 (283)
495 3osu_A 3-oxoacyl-[acyl-carrier 45.9 51 0.0017 31.8 7.9 129 179-322 5-140 (246)
496 3gvc_A Oxidoreductase, probabl 45.9 44 0.0015 33.2 7.5 127 178-322 29-161 (277)
497 3v8b_A Putative dehydrogenase, 45.8 33 0.0011 34.1 6.6 87 178-272 28-114 (283)
498 2qhx_A Pteridine reductase 1; 45.6 2E+02 0.007 29.0 12.8 63 178-248 46-110 (328)
499 2bd0_A Sepiapterin reductase; 44.9 40 0.0014 32.1 6.9 85 180-271 4-94 (244)
500 4fc7_A Peroxisomal 2,4-dienoyl 44.7 40 0.0014 33.3 7.0 89 177-272 26-114 (277)
No 1
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=100.00 E-value=4.2e-57 Score=502.54 Aligned_cols=454 Identities=20% Similarity=0.314 Sum_probs=342.5
Q ss_pred cHHHHHHHHhCCCCCHH-HHHHHHHHhCCCCCcEEEEcCCCccCHHHHHHHHHHhhHHhhhcccccccccccCcccccCC
Q psy17365 44 NKDFEQYYKAQKICPEN-EWDSMLETLKKDLPTAFRITNCSPEEAKALLSIVESKFFKELVNDQETSEEEKVAPICLPWY 122 (646)
Q Consensus 44 n~~f~~yy~~~~~~~~~-e~~~f~~al~~~lP~~~RVN~~k~~~~~~l~~~L~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 122 (646)
.+.|.++++. +++++ ++++|++++++++|+++|||++| ++++++++.|++.++ ...++||+
T Consensus 9 P~~~~~~~~~--~~g~~~~~~~~~~a~~~~~p~~lRvN~lk-~~~~~~~~~L~~~g~---------------~~~~~~~~ 70 (479)
T 2frx_A 9 PDAFLTQMRE--AMPSTLSFDDFLAACQRPLRRSIRVNTLK-ISVADFLQLTAPYGW---------------TLTPIPWC 70 (479)
T ss_dssp CHHHHHHHGG--GCC----CHHHHHHHTSCCCCCEEECTTT-CCHHHHHHHHGGGCC---------------CCCEETTE
T ss_pred cHHHHHHHHH--HcCccHHHHHHHHhcCCCCCEEEEEeCCC-CCHHHHHHHHHHcCC---------------ceeecCCC
Confidence 3567777763 46665 68999999999999999999999 999999888765432 33578999
Q ss_pred CCCceeeeecc-ccccccchhhhhhhhhhhcccccccEEEecccccccccccCCC--CCCeEEEEcCCCchHHHHHHHHh
Q psy17365 123 PEQMGWQLQLS-RRAIRTSQAFSKLHQFLIMENATGHISRQEAVSMIPPLLLDVQ--THHKVLDMCAAPGSKTAQIIEMI 199 (646)
Q Consensus 123 p~~l~~~~~~~-~~~l~~~~~~~~~~~fl~~~~~~G~i~~Qd~~Sml~~~~Ld~~--pg~~VLDmCAaPGgKT~~lae~l 199 (646)
|+++.+..... ...+.+++.| ..|.+++||++||+++.+|+++ +|++|||||||||+||++||+++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~-----------~~G~~~~Qd~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~ 139 (479)
T 2frx_A 71 EEGFWIERDNEDALPLGSTAEH-----------LSGLFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARM 139 (479)
T ss_dssp EEEEC---------CGGGSHHH-----------HTTSEEECCHHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHT
T ss_pred CceEEEecCcccccCcccChHH-----------hCcEEEEECHHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhC
Confidence 99764321110 1135566655 6999999999999999999999 99999999999999999999997
Q ss_pred hhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCccc
Q psy17365 200 HAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTM 279 (646)
Q Consensus 200 ~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~l 279 (646)
+ +.|.|+|+|+++.|++.+++|++++|+.|+.++++|+..++... ...||+||+||||||+|++
T Consensus 140 ~-------~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~---------~~~fD~Il~D~PcSg~G~~ 203 (479)
T 2frx_A 140 N-------NEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAV---------PEMFDAILLDAPCSGEGVV 203 (479)
T ss_dssp T-------TCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHS---------TTCEEEEEEECCCCCGGGG
T ss_pred C-------CCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhc---------cccCCEEEECCCcCCcccc
Confidence 5 57899999999999999999999999999999999998764311 2479999999999999999
Q ss_pred ccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHHHHHHHHHccCcEEEeeccccCCCCcc
Q psy17365 280 RKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAVIQRLIVETQGAVQLVDVSAITPALKY 359 (646)
Q Consensus 280 rk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~VV~~~L~~~~~~~elv~~~~~lp~l~~ 359 (646)
+++|++++.|++.++..++.+|.+||.+|+++|||||+|||||||++++|||+||+++|+++++.++++++...+|
T Consensus 204 ~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~~~~~~~~~~~~~~~~---- 279 (479)
T 2frx_A 204 RKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGDLFP---- 279 (479)
T ss_dssp GTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHHHHHHSTTTEEECCCTTSST----
T ss_pred cCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHHHHHHHHHCCCceeccccccccc----
Confidence 9999999999999999999999999999999999999999999999999999999999999987667665442221
Q ss_pred CCCCcccccCCCCCCCccCCcCCCcccccccccCCCCCCCCCcccccccccccccCCcCCCCCcccccCCCCCCCCCCCC
Q psy17365 360 APGLSQWRPASKDNLDGYGSFDEVPDKWKTQVRPQMFPTGDPSHHLERCSVFGLLPHQQGPRADNGEAESKPEPEASSPT 439 (646)
Q Consensus 360 ~~G~~~w~v~~~~~~~~~~~~~~~~~~~~~~~~~~~fp~~~~~~~l~~c~~~Ri~Ph~~~tgG~~~~k~~~~~~~~~~~~ 439 (646)
|...| ...+.|+ |++||.++|+|||+++..+.... .
T Consensus 280 --~~~~~------------------------------------~~~~g~~--r~~P~~~~~dGfF~A~l~k~~~~----~ 315 (479)
T 2frx_A 280 --GANKA------------------------------------LTEEGFL--HVFPQIYDCEGFFVARLRKTQAI----P 315 (479)
T ss_dssp --TGGGG------------------------------------BCTTSCE--EECTTTTTSCCEEEEEEEECSCC----C
T ss_pred --ccccc------------------------------------cccCCeE--EECCCCCCcCccEEEEEEEcCCC----C
Confidence 11111 0124678 99999999999987762221100 0
Q ss_pred CCCCcccccCCCCCCCCCCccccCC-CcchhhhhHhhhCCCCCCCCCceeeeccCCCcCEEEEcChhhHHHHhhCCCCce
Q psy17365 440 REPPSKKRKRQPQGYKEDPFVFFNT-DEAVWPPIRDFYEISPSLPVDCLLTRCLVGKKKIIYFTSPMVKNIIQSNENNLK 518 (646)
Q Consensus 440 ~~~~~~k~~~~~~~~~~~pf~~~~~-~~~~~~~i~~~ygi~~~f~~~~~~~R~~~g~~~~iy~~s~~~~~i~~~~~~~lk 518 (646)
..+.++++. +..||..++. +.+.|+.+.++|+++.. +...++.| ++.||+++..+..++ ++||
T Consensus 316 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~p~~~~~~~----~~lr 379 (479)
T 2frx_A 316 ALPAPKYKV------GNFPFSPVKDREAGQIRQAATGVGLNWD-ENLRLWQR-----DKELWLFPVGIEALI----GKVR 379 (479)
T ss_dssp CCCCCCCCC------CCCSCEECCHHHHHHHHHHHHTTTBCCC-TTEEEEES-----SSEEEEEEHHHHTTB----TTBC
T ss_pred Ccccccccc------ccCCccccchhhHHHHHHHHHHcCCCCC-CCceEEEE-----CCEEEEeccccchhc----cCcE
Confidence 001111111 1235554432 23457778888888532 34467775 368999988777433 6799
Q ss_pred EEeCceeeEEEecCCCCccceeeccchhHHHhhhhCCCcEEEeCHHHHHHHHhcCCCCCCccccccCHHHHhhhcccCCC
Q psy17365 519 IINTGVKSFARCDNKVMGCAFRFCQEGLSSMKAFIGEKRKVRVNREELITILNNSTPEQPTDLELLRPETRQTLTREGFG 598 (646)
Q Consensus 519 iv~~Gvk~F~r~~~~~~~c~~Ri~~eg~~~l~~~~~~kr~v~~~~~~~~~ll~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 598 (646)
|+++|+++.+..+. +|+.++..+-.+.+.- .++.++++.+++...|..+.-. .+ . ...
T Consensus 380 ~~r~G~~lg~~kk~-----rf~Ps~~la~~l~~~~-~~~~~~l~~~~~~~yL~Ge~i~----~~---~---------~~~ 437 (479)
T 2frx_A 380 FSRLGIKLAETHNK-----GYRWQHEAVIALASPD-NMNAFELTPQEAEEWYRGRDVY----PQ---A---------APV 437 (479)
T ss_dssp CSEESEEEEEEETT-----EEEECHHHHHHHBCSS-SSSEEECCHHHHHHHHTTCCCC----CS---S---------CCS
T ss_pred EEecceEEEEEecC-----CceEcHHHHHhcchhh-cCcEEECCHHHHHHHhcCCCCc----CC---C---------CCC
Confidence 99999999997654 5999999999987776 8999999999999999876654 11 1 112
Q ss_pred CccEEEEEecCCCeEEEEeeeccceeeccCHH
Q psy17365 599 VGSCLLELQDDLPLSLVGWRGKSSVRAYISGS 630 (646)
Q Consensus 599 ~G~~v~~~~~~~~~~~~~w~g~~s~~~~v~k~ 630 (646)
-|-++|.++ +.++=++-|.|.. ++=+.+|.
T Consensus 438 ~G~vlv~~~-g~pLG~gK~~g~~-lKN~yPkg 467 (479)
T 2frx_A 438 ADDVLVTFQ-HQPIGLAKRIGSR-LKNSYPRE 467 (479)
T ss_dssp CSEEEEEET-TEEEEEEECTTTT-CCCCSCGG
T ss_pred CCEEEEEEC-CEeeEEEEeeCCE-EecCCCHH
Confidence 477777665 5556566666664 44344553
No 2
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=100.00 E-value=9.4e-55 Score=479.92 Aligned_cols=440 Identities=22% Similarity=0.335 Sum_probs=329.5
Q ss_pred HHHHHHHHhCCCCCHHHHHHHHHHhCCCCC-cEEEEcCCCccCHHHHHHHHHHhhHHhhhcccccccccccCcccccCCC
Q psy17365 45 KDFEQYYKAQKICPENEWDSMLETLKKDLP-TAFRITNCSPEEAKALLSIVESKFFKELVNDQETSEEEKVAPICLPWYP 123 (646)
Q Consensus 45 ~~f~~yy~~~~~~~~~e~~~f~~al~~~lP-~~~RVN~~k~~~~~~l~~~L~~~~~~~l~~~~~~~~~~~~~~~~~~~~p 123 (646)
+-|.++|+. .++ +|+++|++++++++| +++|||++| + +++++.+ ++. .....++||+|
T Consensus 10 ~w~~~~~~~--~~g-~e~~~~~~a~~~~~~~~~lRvN~lk-~--~~~~~~~---~~~------------~~~~~~~~~~~ 68 (456)
T 3m4x_A 10 QQFIKKYRL--LLG-EEASDFFSALEQGSVKKGFRWNPLK-P--AGLDMVQ---TYH------------SEELQPAPYSN 68 (456)
T ss_dssp HHHHHHHHH--HHG-GGHHHHHHHHHHCCCCCEEECCTTS-T--THHHHHH---HHT------------CSSCCBCTTCT
T ss_pred HHHHHHHHH--HhC-HHHHHHHHHcCCCCCCcEEEEcCcc-H--HHHHHhc---CCc------------ccccCCCCCCc
Confidence 445555553 233 569999999999999 999999999 6 5554432 211 00013789999
Q ss_pred CCceeeeeccccccccchhhhhhhhhhhcccccccEEEecccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcC
Q psy17365 124 EQMGWQLQLSRRAIRTSQAFSKLHQFLIMENATGHISRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAAD 203 (646)
Q Consensus 124 ~~l~~~~~~~~~~l~~~~~~~~~~~fl~~~~~~G~i~~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~ 203 (646)
+++. . ..+.+++.| ..|.+++||++||+++.+|++++|++|||||||||+||++||++++
T Consensus 69 ~~~~---~---~~~~~~~~~-----------~~G~~~vQd~ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~--- 128 (456)
T 3m4x_A 69 EGFL---G---TVNGKSFLH-----------QAGYEYSQEPSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMK--- 128 (456)
T ss_dssp TEEE---S---CCCTTSHHH-----------HTTSCEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHT---
T ss_pred ceEE---c---CCCCCChHH-----------hCCcEEEECHHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcC---
Confidence 9763 1 224666666 6999999999999999999999999999999999999999999985
Q ss_pred CCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCc
Q psy17365 204 SNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNP 283 (646)
Q Consensus 204 ~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~p 283 (646)
+.|.|+|+|+++.|++.+++|++++|+.|+.++++|+..++... ...||+||+||||||+|++|++|
T Consensus 129 ----~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~---------~~~FD~Il~DaPCSg~G~~rr~p 195 (456)
T 3m4x_A 129 ----GKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHF---------SGFFDRIVVDAPCSGEGMFRKDP 195 (456)
T ss_dssp ----TCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHH---------TTCEEEEEEECCCCCGGGTTTCH
T ss_pred ----CCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhc---------cccCCEEEECCCCCCccccccCH
Confidence 57899999999999999999999999999999999998764321 25799999999999999999999
Q ss_pred cccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHHHHHHHHHccCcEEEeeccccCCCCccCCCC
Q psy17365 284 DIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAVIQRLIVETQGAVQLVDVSAITPALKYAPGL 363 (646)
Q Consensus 284 d~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~VV~~~L~~~~~~~elv~~~~~lp~l~~~~G~ 363 (646)
++.+.|++.++..++.+|.+||.+|+++|||||+|||||||++|+|||+||+++|++++ ++++++.. .++ ..+|+
T Consensus 196 ~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~~~--~~l~~~~~-~~~--~~~~~ 270 (456)
T 3m4x_A 196 NAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVENYP--VTIEEIPL-TQS--VSSGR 270 (456)
T ss_dssp HHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHHSS--EEEECCCC-SSC--CEECC
T ss_pred HHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHHhCC--CEEEeccc-ccc--ccccc
Confidence 99999999999999999999999999999999999999999999999999999999996 89988752 222 23455
Q ss_pred cccccCCCCCCCccCCcCCCcccccccccCCCCCCCCCcccccccccccccCCcCCCCCcccccCCCCCCCCCCCCCCCC
Q psy17365 364 SQWRPASKDNLDGYGSFDEVPDKWKTQVRPQMFPTGDPSHHLERCSVFGLLPHQQGPRADNGEAESKPEPEASSPTREPP 443 (646)
Q Consensus 364 ~~w~v~~~~~~~~~~~~~~~~~~~~~~~~~~~fp~~~~~~~l~~c~~~Ri~Ph~~~tgG~~~~k~~~~~~~~~~~~~~~~ 443 (646)
..|... + .++.|+ |+|||.++|+|||+++..|.... . ..
T Consensus 271 ~~~~~~----------------------------~-----~~~~~~--r~~P~~~~~dGFF~A~l~k~~~~-----~-~~ 309 (456)
T 3m4x_A 271 SEWGSV----------------------------A-----GLEKTI--RIWPHKDQGEGHFVAKLTFHGQN-----Q-MH 309 (456)
T ss_dssp GGGSSS----------------------------T-----TGGGSE--EECTTTSSSSCEEEEEEEECSCC-----C-CC
T ss_pred cccccc----------------------------c-----ccCCeE--EECCCCCCCcCeEEEEEEECCCC-----c-cc
Confidence 555311 0 357899 99999999999998773332110 0 00
Q ss_pred cccccCCCCCCCCCCccccC-CCcchhhhhHhhhCCCCCCCCCceeeeccCCCcCEEEEcChhhHHHHhhCCCCceEEeC
Q psy17365 444 SKKRKRQPQGYKEDPFVFFN-TDEAVWPPIRDFYEISPSLPVDCLLTRCLVGKKKIIYFTSPMVKNIIQSNENNLKIINT 522 (646)
Q Consensus 444 ~~k~~~~~~~~~~~pf~~~~-~~~~~~~~i~~~ygi~~~f~~~~~~~R~~~g~~~~iy~~s~~~~~i~~~~~~~lkiv~~ 522 (646)
+.+++ +. .++..++ +..+.|+.+...+++ .+...++.+ +++||++..... ...+|||++.
T Consensus 310 ~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-----~~~~~~~p~~~~-----~~~~l~~~r~ 370 (456)
T 3m4x_A 310 KEKKT-RK-----KSKVQMTKEQEKLWTEFSNDFHY---EATGRLLVF-----NDHLWEVPELAP-----SLDGLKVVRT 370 (456)
T ss_dssp C---------------CSCCHHHHHHHHHHHHHTTC---CCCSEEEEE-----TTEEEEECTTCC-----CCTTCCEEEE
T ss_pred ccccc-cc-----cccccCcHHHHHHHHHHHHHhcc---CCCCceEEE-----CCEEEEeccCcc-----cccCCeEEEc
Confidence 00000 00 0111111 123456666666665 234466665 379999987664 4478999999
Q ss_pred ceeeEEEecCCCCccceeeccchhHHHhhhhCCCcEEEeCHHHHHHHHhcCCCCCCccccccCHHHHhhhcccCCCCccE
Q psy17365 523 GVKSFARCDNKVMGCAFRFCQEGLSSMKAFIGEKRKVRVNREELITILNNSTPEQPTDLELLRPETRQTLTREGFGVGSC 602 (646)
Q Consensus 523 Gvk~F~r~~~~~~~c~~Ri~~eg~~~l~~~~~~kr~v~~~~~~~~~ll~~~~p~~~~~~~~~~~~~~~~~~~~~~~~G~~ 602 (646)
|+++=+-.+. +|+.++..+-.+.+-- .++.++++.++....|..+.-. ++ . ..|-+
T Consensus 371 G~~lg~~kk~-----~f~p~~~la~~l~~~~-~~~~~~l~~~~~~~yl~ge~i~-------~~----------~-~~g~~ 426 (456)
T 3m4x_A 371 GLHLGDFKKN-----RFEPSYALALATKKIE-NIPCLPITQKEWQSYTAGETFQ-------RD----------G-NQGWV 426 (456)
T ss_dssp SEEEEEEETT-----EEEECHHHHHTCCCGG-GSCEEEECHHHHHHHHHTCCEE-------CS----------C-CCEEE
T ss_pred CceeeEEeCC-----ceeECHHHHHhcCccc-cCcEEEcCHHHHHHHhCCCCcc-------cC----------C-CCCEE
Confidence 9999876543 5999998888876655 6789999999999998876543 11 1 13776
Q ss_pred EEEEecCCCeEEEEeeeccceeeccCH
Q psy17365 603 LLELQDDLPLSLVGWRGKSSVRAYISG 629 (646)
Q Consensus 603 v~~~~~~~~~~~~~w~g~~s~~~~v~k 629 (646)
+|.++ +.++=++-|.|.. ++=+.+|
T Consensus 427 lv~~~-g~~lG~~k~~~~~-~kN~yp~ 451 (456)
T 3m4x_A 427 LLVLD-KIPVGFGKQVKGT-VKNFFPK 451 (456)
T ss_dssp EEEET-TEEEEEEEEETTE-EEECSCG
T ss_pred EEEEC-CEeEEEEEeeCCE-EecCCCh
Confidence 66655 6667677777754 4444444
No 3
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=100.00 E-value=1.9e-55 Score=471.79 Aligned_cols=275 Identities=24% Similarity=0.304 Sum_probs=221.9
Q ss_pred hhccHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCcEEEEcCCCccCHHHHHHHHHHhhHHhhhcc----c--cccccccc
Q psy17365 41 VRENKDFEQYYKAQKICPENEWDSMLETLKKDLPTAFRITNCSPEEAKALLSIVESKFFKELVND----Q--ETSEEEKV 114 (646)
Q Consensus 41 ~~~n~~f~~yy~~~~~~~~~e~~~f~~al~~~lP~~~RVN~~k~~~~~~l~~~L~~~~~~~l~~~----~--~~~~~~~~ 114 (646)
..-.+.|+.||+.+ ++ ++|..|.++|.+|.+..+|||+++ +.+++.+.|+..+...+... . ..++....
T Consensus 17 ~~al~~Fd~~Y~~~--~G-~~W~~~r~aL~~~~~~~a~vN~f~--~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (359)
T 4fzv_A 17 RLALQNFDMTYSVQ--FG-DLWPSIRVSLLSEQKYGALVNNFA--AWDHVSAKLEQLSAKDFVNEAISHWELQSEGGQSA 91 (359)
T ss_dssp HHHHHHHHHHHHHH--HG-GGHHHHHHHHTSCCCCEEEECTTS--CHHHHHHHHHHTTCEEHHHHHHHTTTCCC-----C
T ss_pred HHHHHHHHHHHHHH--hh-hhhHHHHHHHcCcchhEEEeccCC--ChHHHHHHHHhccCccchhhhhccccccccccccc
Confidence 34557799999976 12 789999999999999999999986 46788888887654322110 0 11122233
Q ss_pred CcccccCCCCCceeeeeccccccccchhhhhhhhhhhcccccccEEEecccccccccccCCCCCCeEEEEcCCCchHHHH
Q psy17365 115 APICLPWYPEQMGWQLQLSRRAIRTSQAFSKLHQFLIMENATGHISRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQ 194 (646)
Q Consensus 115 ~~~~~~~~p~~l~~~~~~~~~~l~~~~~~~~~~~fl~~~~~~G~i~~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~ 194 (646)
.+.+.+|++....+.....+.++.+.|.+. ...+..+.|++||++||+|+.+|+++||++||||||||||||+|
T Consensus 92 ~p~~~~~~~~~~l~~~~~~~g~~~~~p~~~------~g~~~vqd~~iQd~aS~l~~~~L~~~pg~~VLD~CAaPGGKT~~ 165 (359)
T 4fzv_A 92 APSPASWACSPNLRCFTFDRGDISRFPPAR------PGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLA 165 (359)
T ss_dssp CSSCHHHHSCSSCCEEECCTTCCCCCCCCC------BCTTSSBSEEEECGGGHHHHHHHCCCTTEEEEESSCTTCHHHHH
T ss_pred CCCcccccCCccceEEecCCCChhcCCCcc------cCceeccchhhhCHHHHHHHHHhCCCCCCEEEEecCCccHHHHH
Confidence 445556655433332333455566655553 33456788999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC------CCeEEEecCCCCCccccccCCCCCCCCCCCCeee
Q psy17365 195 IIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS------PCAIITNHDASVMPNVLYTDADGNKVPMKFDRVL 268 (646)
Q Consensus 195 lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~------~ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL 268 (646)
||+++ +.|.|+|+|++.+|++.|++|++|+|. .++.+++.|+..++... ...||+||
T Consensus 166 la~~~--------~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~---------~~~fD~VL 228 (359)
T 4fzv_A 166 LLQTG--------CCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELE---------GDTYDRVL 228 (359)
T ss_dssp HHHTT--------CEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHS---------TTCEEEEE
T ss_pred HHHhc--------CCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhc---------cccCCEEE
Confidence 99875 468999999999999999999999986 47889999998765432 25799999
Q ss_pred cCCCCCCC--cccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHHHHHHHHHccC
Q psy17365 269 CDVPCTGD--GTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAVIQRLIVETQG 343 (646)
Q Consensus 269 ~D~PCSG~--G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~VV~~~L~~~~~ 343 (646)
+||||||+ |++|++|+++++|++.++..++.+|.+||.+|+++|||||+|||||||++|+|||+||++||+++++
T Consensus 229 lDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L~~~~~ 305 (359)
T 4fzv_A 229 VDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLAN 305 (359)
T ss_dssp EECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHHHHHHHHH
T ss_pred ECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHHHHHhCCC
Confidence 99999997 7889999999999999999999999999999999999999999999999999999999999998864
No 4
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=100.00 E-value=1.3e-53 Score=471.58 Aligned_cols=436 Identities=21% Similarity=0.305 Sum_probs=325.1
Q ss_pred HHHHHHHHhCCCCCHHHHHHHHHHhCCC-CCcEEEEcCCCccCHHHHHHHHHHhhHHhhhcccccccccccCcccccCCC
Q psy17365 45 KDFEQYYKAQKICPENEWDSMLETLKKD-LPTAFRITNCSPEEAKALLSIVESKFFKELVNDQETSEEEKVAPICLPWYP 123 (646)
Q Consensus 45 ~~f~~yy~~~~~~~~~e~~~f~~al~~~-lP~~~RVN~~k~~~~~~l~~~L~~~~~~~l~~~~~~~~~~~~~~~~~~~~p 123 (646)
+-|.++|+. +++ +|+++|+++++++ +|+++|||++| ++++++.+.| + ....++||+|
T Consensus 4 ~w~~~~~~~--~~g-~e~~~~l~a~~~~~~~~~lRvN~lk-~~~~~~~~~l---~---------------~~~~~~~~~~ 61 (464)
T 3m6w_A 4 KAFLSRMAE--LLG-EEFPAFLKALTEGKRTYGLRVNTLK-LPPEAFQRIS---P---------------WPLRPIPWCQ 61 (464)
T ss_dssp HHHHHHHHH--HHG-GGHHHHHHHHHTSCCCCEEEECTTT-CCHHHHHHHC---S---------------SCCEEETTEE
T ss_pred HHHHHHHHH--HHH-HHHHHHHHHcCCCCCCeEEEEcCCC-CCHHHHHHHc---C---------------CCceecCCCC
Confidence 345555543 233 5799999999999 99999999999 9998876644 1 1235789999
Q ss_pred CCceeeeeccccccccchhhhhhhhhhhcccccccEEEecccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcC
Q psy17365 124 EQMGWQLQLSRRAIRTSQAFSKLHQFLIMENATGHISRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAAD 203 (646)
Q Consensus 124 ~~l~~~~~~~~~~l~~~~~~~~~~~fl~~~~~~G~i~~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~ 203 (646)
+++.+. ....+.+++.| .+|.+++||++||+++.+|++++|++|||||||||+||++||+++.
T Consensus 62 ~g~~l~---~~~~~~~~~~~-----------~~G~~~vQd~ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~--- 124 (464)
T 3m6w_A 62 EGFYYP---EEARPGPHPFF-----------YAGLYYIQEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMG--- 124 (464)
T ss_dssp EEEECC---TTCCCSSSHHH-----------HTTSEEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTT---
T ss_pred ceEEEC---CCCCcccChHH-----------hCCeEEEECHHHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCC---
Confidence 976432 12235666766 6999999999999999999999999999999999999999999975
Q ss_pred CCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCc
Q psy17365 204 SNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNP 283 (646)
Q Consensus 204 ~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~p 283 (646)
+.|.|+|+|+++.|++.+++|++++|+. +.++++|+..++... ...||+||+||||||+|+++++|
T Consensus 125 ----~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~---------~~~FD~Il~D~PcSg~G~~rr~p 190 (464)
T 3m6w_A 125 ----GKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAF---------GTYFHRVLLDAPCSGEGMFRKDR 190 (464)
T ss_dssp ----TCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHH---------CSCEEEEEEECCCCCGGGTTTCT
T ss_pred ----CCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhc---------cccCCEEEECCCcCCccccccCh
Confidence 5689999999999999999999999998 999999998765321 25799999999999999999999
Q ss_pred cccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHHHHHHHHHccCcEEEeeccccCCCCccCCCC
Q psy17365 284 DIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAVIQRLIVETQGAVQLVDVSAITPALKYAPGL 363 (646)
Q Consensus 284 d~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~VV~~~L~~~~~~~elv~~~~~lp~l~~~~G~ 363 (646)
++.+.|++.++..+..+|.+||..|+++|||||+|||||||++++|||++|+++|+++++ ++++++.... ...+|.
T Consensus 191 d~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~~l~~~~~-~~l~~~~~~~---~~~~~~ 266 (464)
T 3m6w_A 191 EAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFLKAHPE-FRLEDARLHP---LFAPGV 266 (464)
T ss_dssp TSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCTT-EEEECCCCST---TSEECC
T ss_pred HHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHHHHHHCCC-cEEEeccccc---ccccCc
Confidence 999999999999999999999999999999999999999999999999999999999974 8998875211 134555
Q ss_pred cccccCCCCCCCccCCcCCCcccccccccCCCCCCCCCcccccccccccccCCcCCCCCcccccCCCCCCCCCCCCCCCC
Q psy17365 364 SQWRPASKDNLDGYGSFDEVPDKWKTQVRPQMFPTGDPSHHLERCSVFGLLPHQQGPRADNGEAESKPEPEASSPTREPP 443 (646)
Q Consensus 364 ~~w~v~~~~~~~~~~~~~~~~~~~~~~~~~~~fp~~~~~~~l~~c~~~Ri~Ph~~~tgG~~~~k~~~~~~~~~~~~~~~~ 443 (646)
..|... ...++.|+ |+|||.++|+|||+++..|..... ..+
T Consensus 267 ~~~~~~--------------------------------~~~~~~~~--r~~P~~~~~dGfF~A~l~k~~~~~-----~~~ 307 (464)
T 3m6w_A 267 PEWGEG--------------------------------NPELLKTA--RLWPHRLEGEGHFLARFRKEGGAW-----STP 307 (464)
T ss_dssp GGGTTT--------------------------------CGGGGGSE--EECTTTSSSSCEEEEEEEECSCCC-----CCC
T ss_pred cccccc--------------------------------ccccCCeE--EECCCCCCceeEEEEEEEECCCCC-----Ccc
Confidence 556411 01357899 999999999999987733321110 001
Q ss_pred cccccCCCCCCCCCCccccCCCcchhhhhHhhhCCCCCCCCCceeeeccCCCcCEEEEcChhhHHHHhhCCCCceEEeCc
Q psy17365 444 SKKRKRQPQGYKEDPFVFFNTDEAVWPPIRDFYEISPSLPVDCLLTRCLVGKKKIIYFTSPMVKNIIQSNENNLKIINTG 523 (646)
Q Consensus 444 ~~k~~~~~~~~~~~pf~~~~~~~~~~~~i~~~ygi~~~f~~~~~~~R~~~g~~~~iy~~s~~~~~i~~~~~~~lkiv~~G 523 (646)
+.|++ + +. .+...+.|+.+.++.. .++...++.+ +++||++..... +..+|||++.|
T Consensus 308 ~~~~~-~----~~-----~~~~~~~~~~~~~~~~---~~~~~~~~~~-----~~~~~~~p~~~~-----~~~~l~~~r~G 364 (464)
T 3m6w_A 308 RLERP-S----PL-----SQEALRAFRGFLEEAG---LTLEGPVLDR-----AGHLYLLPEGLP-----TLLGLKAPAPG 364 (464)
T ss_dssp CBCCC-C----CC-----CHHHHHHHHHHHHHHT---CCCCSCEEEE-----TTEEEECCTTCB-----CCTTSCCSBSS
T ss_pred ccccc-c----cc-----cHHHHHHHHHHHhhhc---ccCCccEEEE-----CCEEEEeccCcc-----cccCCeEEEcc
Confidence 11111 0 00 0111223443332221 1344567765 379999988665 44689999999
Q ss_pred eeeEEEecCCCCccceeeccchhHHHhhhh---CCCcEEEeCHHH--HHHHHhcCCCCCCccccccCHHHHhhhcccCCC
Q psy17365 524 VKSFARCDNKVMGCAFRFCQEGLSSMKAFI---GEKRKVRVNREE--LITILNNSTPEQPTDLELLRPETRQTLTREGFG 598 (646)
Q Consensus 524 vk~F~r~~~~~~~c~~Ri~~eg~~~l~~~~---~~kr~v~~~~~~--~~~ll~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 598 (646)
+++=+-.+. +|+.++.-.-.+.+-. ..++.+.++.+| ....|..+.-. ++. . .
T Consensus 365 ~~lg~~kk~-----~f~p~~~la~~l~~~~~~~~~~~~~~l~~~~~~~~~yl~ge~i~-------~~~---------~-~ 422 (464)
T 3m6w_A 365 LYLGKVQKG-----RFLPARALALAFGATLPWPEGLPRLALTPEDPRALAFATGEGVA-------WEG---------E-D 422 (464)
T ss_dssp EEEEEEETT-----EEEEBHHHHHHBTTTBCCCTTSCEEEECTTSHHHHHHHTTCCEE-------CCS---------C-C
T ss_pred ceeeEEeCC-----ceeECHHHHHhcCcccccccccceEEecccHHHHHHHHCCCCcc-------CCC---------C-C
Confidence 999886543 5999998888776651 146789998777 77888765432 111 0 1
Q ss_pred CccEEEEEec---CCCeEEEEeeecc
Q psy17365 599 VGSCLLELQD---DLPLSLVGWRGKS 621 (646)
Q Consensus 599 ~G~~v~~~~~---~~~~~~~~w~g~~ 621 (646)
.|-++|++.. +.++=++-|.|..
T Consensus 423 ~G~~lv~~~~~~~g~~lG~~k~~g~~ 448 (464)
T 3m6w_A 423 HPLALVVLKTAAGEFPLDFGKAKRGV 448 (464)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEETTE
T ss_pred CceEEEeeccEECCEeeEEEEccCCE
Confidence 3777774433 5556666677754
No 5
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=100.00 E-value=6.1e-50 Score=422.60 Aligned_cols=282 Identities=30% Similarity=0.444 Sum_probs=234.7
Q ss_pred HHHHHHHHHhCCCCCcEEEEcCCCccCHHHHHHHHHHhhHHhhhcccccccccccCcccccCCCCCceeeeecccccccc
Q psy17365 60 NEWDSMLETLKKDLPTAFRITNCSPEEAKALLSIVESKFFKELVNDQETSEEEKVAPICLPWYPEQMGWQLQLSRRAIRT 139 (646)
Q Consensus 60 ~e~~~f~~al~~~lP~~~RVN~~k~~~~~~l~~~L~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~l~~ 139 (646)
++|++|++++++++|+++|||++| ++++++++.|++.++ ...+.+|+|+++. +......+..
T Consensus 30 ~~~~~~~~~~~~~~p~~~RvN~~k-~~~~~~~~~L~~~g~---------------~~~~~~~~~~~~~--~~~~~~~~~~ 91 (315)
T 1ixk_A 30 ERAIRIAEAMEKPLPRCFRVNTLK-ISVQDLVKRLNKKGF---------------QFKRVPWAKEGFC--LTREPFSITS 91 (315)
T ss_dssp THHHHHHHHTTSCCCCEEEECTTT-SCHHHHHHHHHHTTC---------------EEEEETTEEEEEE--EEECSSCGGG
T ss_pred HHHHHHHHHcCCCCCeEEEEeCCC-CCHHHHHHHHHhCCC---------------eeeECCCCCceEE--EeCCCCCccc
Confidence 789999999999999999999999 999999998876653 2346789998653 3222223555
Q ss_pred chhhhhhhhhhhcccccccEEEecccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCH
Q psy17365 140 SQAFSKLHQFLIMENATGHISRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDN 219 (646)
Q Consensus 140 ~~~~~~~~~fl~~~~~~G~i~~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~ 219 (646)
++.| ..|.+++||.+||+++.++++++|++|||+|||||++|+++++.++ +.|.|+|+|+++
T Consensus 92 ~~~~-----------~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~-------~~~~v~avD~s~ 153 (315)
T 1ixk_A 92 TPEF-----------LTGLIYIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMR-------NDGVIYAFDVDE 153 (315)
T ss_dssp SHHH-----------HTTSEEECCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTT-------TCSEEEEECSCH
T ss_pred ChhH-----------hcceEEEeCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhC-------CCCEEEEEcCCH
Confidence 5555 5899999999999999999999999999999999999999999874 468999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHH
Q psy17365 220 NRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHG 299 (646)
Q Consensus 220 ~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~ 299 (646)
.+++.+++|++++|+.++.++++|+..++.. ...||+|++|+||||.|+++++|++++.|++.++..++.
T Consensus 154 ~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~----------~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~ 223 (315)
T 1ixk_A 154 NRLRETRLNLSRLGVLNVILFHSSSLHIGEL----------NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQG 223 (315)
T ss_dssp HHHHHHHHHHHHHTCCSEEEESSCGGGGGGG----------CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCeEEEEECChhhcccc----------cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHH
Confidence 9999999999999999999999999876531 246999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCeEEEEcCCCCccccHHHHHHHHHHccCcEEEeeccccCCCCccCCCCcccccCCCCCCCccCC
Q psy17365 300 IQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAVIQRLIVETQGAVQLVDVSAITPALKYAPGLSQWRPASKDNLDGYGS 379 (646)
Q Consensus 300 lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~VV~~~L~~~~~~~elv~~~~~lp~l~~~~G~~~w~v~~~~~~~~~~~ 379 (646)
+|.++|.++.++|||||+|||||||++++|||++|.++|++++ ++++++. ...+|+..|...
T Consensus 224 ~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~--~~~~~~~------~~~~~~~~~~~~---------- 285 (315)
T 1ixk_A 224 LQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFD--VELLPLK------YGEPALTNPFGI---------- 285 (315)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSS--EEEECCC------SSEECCSSGGGC----------
T ss_pred HHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCC--CEEecCC------ccccCccccccc----------
Confidence 9999999999999999999999999999999999999999874 8888764 123677777531
Q ss_pred cCCCcccccccccCCCCCCCCCcccccccccccccCCcCCCCCccccc
Q psy17365 380 FDEVPDKWKTQVRPQMFPTGDPSHHLERCSVFGLLPHQQGPRADNGEA 427 (646)
Q Consensus 380 ~~~~~~~~~~~~~~~~fp~~~~~~~l~~c~~~Ri~Ph~~~tgG~~~~k 427 (646)
.|.+ .+++|+ |++||.++|+|||+++
T Consensus 286 ---------------~~~~-----~~~~~~--r~~P~~~~~dGfF~A~ 311 (315)
T 1ixk_A 286 ---------------ELSE-----EIKNAR--RLYPDVHETSGFFIAK 311 (315)
T ss_dssp ---------------CCCG-----GGGGSE--EECTTTSSSCSEEEEE
T ss_pred ---------------cccc-----ccCCEE--EECCCCCCcccEEEEE
Confidence 0111 467899 9999999999998754
No 6
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=100.00 E-value=3.3e-49 Score=416.35 Aligned_cols=284 Identities=21% Similarity=0.345 Sum_probs=207.9
Q ss_pred CCCCCcEEEEcCCCccCHHHHHHHHHHhhHHhhhcccccc--c---ccccCcccccCCCCCceeeeeccccccccchhhh
Q psy17365 70 KKDLPTAFRITNCSPEEAKALLSIVESKFFKELVNDQETS--E---EEKVAPICLPWYPEQMGWQLQLSRRAIRTSQAFS 144 (646)
Q Consensus 70 ~~~lP~~~RVN~~k~~~~~~l~~~L~~~~~~~l~~~~~~~--~---~~~~~~~~~~~~p~~l~~~~~~~~~~l~~~~~~~ 144 (646)
..++|+++|||++| ++++++++.|++.++..- .. ... + .....+...+++|+++.+ . ....+..++.|
T Consensus 7 ~~~~p~~lRvN~lk-~~~~~~~~~L~~~g~~~~-~~-~~~~~~~~~~~~~~~~~~~~~p~~l~~--~-~~~~~~~~~~~- 79 (309)
T 2b9e_A 7 ASQLPRFVRVNTLK-TCSDDVVDYFKRQGFSYQ-GR-ASSLDDLRALKGKHFLLDPLMPELLVF--P-AQTDLHEHPLY- 79 (309)
T ss_dssp --CCCEEEEECTTT-CCHHHHHHHHHHTTCEEE-EE-CSSHHHHHTCCTTEEEECSSSTTEEEE--C-TTCCCTTSHHH-
T ss_pred CCCCCeEEEEeCCC-CCHHHHHHHHHhCCCeee-ec-cccccccccccccccccccCCCceEEe--C-CCCCcccChHH-
Confidence 46899999999999 999999999987764210 00 000 0 000000112344553322 1 12345666666
Q ss_pred hhhhhhhcccccccEEEecccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHH
Q psy17365 145 KLHQFLIMENATGHISRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYM 224 (646)
Q Consensus 145 ~~~~fl~~~~~~G~i~~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~ 224 (646)
+.|.+++||++||+++.+|++++|++|||||||||+||++||++++ +.|.|+|+|+++.|++.
T Consensus 80 ----------~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~-------~~g~V~a~D~~~~~l~~ 142 (309)
T 2b9e_A 80 ----------RAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLK-------NQGKIFAFDLDAKRLAS 142 (309)
T ss_dssp ----------HTTSEEECCTGGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHT-------TCSEEEEEESCHHHHHH
T ss_pred ----------HCCeEEEECHHHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhC-------CCCEEEEEeCCHHHHHH
Confidence 6999999999999999999999999999999999999999999985 57999999999999999
Q ss_pred HHHHHHHcCCCCeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccc--cCCcchhhhhHHHHH
Q psy17365 225 LVHQAKRLNSPCAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWT--KWTPSNGNNLHGIQY 302 (646)
Q Consensus 225 L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~--~w~~~~~~~l~~lQ~ 302 (646)
+++|++++|+.|+.++++|+..++... .....||+||+||||||+|+++++||+.+ .|+++++..++.+|.
T Consensus 143 ~~~n~~r~g~~~v~~~~~D~~~~~~~~-------~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~ 215 (309)
T 2b9e_A 143 MATLLARAGVSCCELAEEDFLAVSPSD-------PRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQ 215 (309)
T ss_dssp HHHHHHHTTCCSEEEEECCGGGSCTTC-------GGGTTEEEEEECCCCCC------------------CCHHHHHHHHH
T ss_pred HHHHHHHcCCCeEEEEeCChHhcCccc-------cccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHH
Confidence 999999999999999999998764211 01146999999999999999999999854 357889999999999
Q ss_pred HHHHHHHHhhccCCeEEEEcCCCCccccHHHHHHHHHHccCcEEEeeccccCCCCccCCCCcccccCCCCCCCccCCcCC
Q psy17365 303 RIVKRGVEMLAVGGKIAYSTCSLNPLEDEAVIQRLIVETQGAVQLVDVSAITPALKYAPGLSQWRPASKDNLDGYGSFDE 382 (646)
Q Consensus 303 ~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~VV~~~L~~~~~~~elv~~~~~lp~l~~~~G~~~w~v~~~~~~~~~~~~~~ 382 (646)
+||.+|+++|+ ||+|||||||++++|||+||.++|++++++++++++.. .|... + .
T Consensus 216 ~iL~~a~~~l~-gG~lvYsTCs~~~~Ene~~v~~~l~~~~~~~~~~~~~~------------~~~~~---~---~----- 271 (309)
T 2b9e_A 216 RALCHALTFPS-LQRLVYSTCSLCQEENEDVVRDALQQNPGAFRLAPALP------------AWPHR---G---L----- 271 (309)
T ss_dssp HHHHHHTTCTT-CCEEEEEESCCCGGGTHHHHHHHHTTSTTTEEECCCCT------------TCCCB---C---C-----
T ss_pred HHHHHHHhccC-CCEEEEECCCCChHHhHHHHHHHHHhCCCcEEEecccc------------ccccc---c---c-----
Confidence 99999999997 99999999999999999999999999986688876531 23210 0 0
Q ss_pred CcccccccccCCCCCCCCCcccccccccccccCCcCCCCCccccc
Q psy17365 383 VPDKWKTQVRPQMFPTGDPSHHLERCSVFGLLPHQQGPRADNGEA 427 (646)
Q Consensus 383 ~~~~~~~~~~~~~fp~~~~~~~l~~c~~~Ri~Ph~~~tgG~~~~k 427 (646)
..|+. .++|+ |+|||.++|+|||+.+
T Consensus 272 -----------~~~~~------~~~~~--r~~P~~~~~dGfF~A~ 297 (309)
T 2b9e_A 272 -----------STFPG------AEHCL--RASPETTLSSGFFVAV 297 (309)
T ss_dssp -----------SSSTT------GGGSE--EECHHHHSSCSEEEEE
T ss_pred -----------cccCC------CCCeE--EECCCCCCCCCeEEEE
Confidence 11222 47899 9999999999998765
No 7
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=100.00 E-value=4.2e-45 Score=403.40 Aligned_cols=274 Identities=24% Similarity=0.358 Sum_probs=236.5
Q ss_pred HHHHHHHHHhC-CCCCcEEEEcCCCccCHHHHHHHHHHhhHHhhhcccccccccccCcccccCCCCCceeeeeccccccc
Q psy17365 60 NEWDSMLETLK-KDLPTAFRITNCSPEEAKALLSIVESKFFKELVNDQETSEEEKVAPICLPWYPEQMGWQLQLSRRAIR 138 (646)
Q Consensus 60 ~e~~~f~~al~-~~lP~~~RVN~~k~~~~~~l~~~L~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~l~ 138 (646)
+++++|+++++ +++|+++|||++| ++++++++.|++.++ ...+.+|+|+++.+. .+..+.
T Consensus 171 ~~~~~~~~a~~~~~~~~~~Rvn~~k-~~~~~~~~~L~~~g~---------------~~~~~~~~~~~~~~~---~~~~~~ 231 (450)
T 2yxl_A 171 DETEDFFRSVNKRHEWISIRVNTLK-ANVEEVIGELEEDGV---------------EVVRSERVPTILKIK---GPYNFD 231 (450)
T ss_dssp GGHHHHHHHHHCCCCEEEEEECTTT-CCHHHHHHHHHHTTC---------------CEEECSSCTTEEEEE---SCCCTT
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCC-CCHHHHHHHHHhCCc---------------cceecCccCceEEeC---CCCCcc
Confidence 78999999999 9999999999999 999999998876653 234678999976542 334566
Q ss_pred cchhhhhhhhhhhcccccccEEEecccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCC
Q psy17365 139 TSQAFSKLHQFLIMENATGHISRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVD 218 (646)
Q Consensus 139 ~~~~~~~~~~fl~~~~~~G~i~~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis 218 (646)
.++.| ..|.+++||.+||+++.++++++|++|||+|||||+||+++++.+. +.|.|+|+|++
T Consensus 232 ~~~~~-----------~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~-------~~~~v~a~D~s 293 (450)
T 2yxl_A 232 TSSAF-----------NEGKIIVQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMK-------NKGKIYAFDVD 293 (450)
T ss_dssp SCHHH-----------HTTSEEECCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTT-------TCSEEEEECSC
T ss_pred cCchh-----------hCceEEecCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcC-------CCCEEEEEcCC
Confidence 77766 6899999999999999999999999999999999999999999874 45899999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhH
Q psy17365 219 NNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLH 298 (646)
Q Consensus 219 ~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~ 298 (646)
+.|++.+++|++++|+.++.++++|+..++... ....||+||+||||||.|+++++|++.+.|++.++..++
T Consensus 294 ~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~--------~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~ 365 (450)
T 2yxl_A 294 KMRMKRLKDFVKRMGIKIVKPLVKDARKAPEII--------GEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMS 365 (450)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSS--------CSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHH
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEcChhhcchhh--------ccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHH
Confidence 999999999999999999999999998764211 114699999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHHHHHHHHHccCcEEEeeccccCCCCccCCCCcccccCCCCCCCccC
Q psy17365 299 GIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAVIQRLIVETQGAVQLVDVSAITPALKYAPGLSQWRPASKDNLDGYG 378 (646)
Q Consensus 299 ~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~VV~~~L~~~~~~~elv~~~~~lp~l~~~~G~~~w~v~~~~~~~~~~ 378 (646)
.+|..+|.++.++|||||+|||||||++++|||++|.++|+++++ ++++++.. . |. .
T Consensus 366 ~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~~~-~~~~~~~~---------~---~~-------~--- 422 (450)
T 2yxl_A 366 QLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPE-FKLVPLKS---------P---YD-------P--- 422 (450)
T ss_dssp HHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCSS-CEECCCCS---------S---SE-------E---
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhCCC-CEEeeccc---------c---cc-------c---
Confidence 999999999999999999999999999999999999999999875 77765431 0 10 0
Q ss_pred CcCCCcccccccccCCCCCCCCCcccccccccccccCCcCCCCCccccc
Q psy17365 379 SFDEVPDKWKTQVRPQMFPTGDPSHHLERCSVFGLLPHQQGPRADNGEA 427 (646)
Q Consensus 379 ~~~~~~~~~~~~~~~~~fp~~~~~~~l~~c~~~Ri~Ph~~~tgG~~~~k 427 (646)
...+.|+ |++||.++|+|||+.+
T Consensus 423 ------------------------~~~~~~~--~~~P~~~~~dGff~a~ 445 (450)
T 2yxl_A 423 ------------------------GFLEGTM--RAWPHRHSTIGFFYAL 445 (450)
T ss_dssp ------------------------CSSTTCE--EECHHHHSSCCEEEEE
T ss_pred ------------------------ccCCCeE--EECCCCCCCCceEEEE
Confidence 0135788 9999999999998754
No 8
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=100.00 E-value=5.4e-44 Score=369.41 Aligned_cols=249 Identities=25% Similarity=0.380 Sum_probs=193.0
Q ss_pred HHHhCCCCCcEEEEcCCCccCHHHHHHHHHHhhHHhhhcccccccccccCcccccCCCCCceeeeeccccccccchhhhh
Q psy17365 66 LETLKKDLPTAFRITNCSPEEAKALLSIVESKFFKELVNDQETSEEEKVAPICLPWYPEQMGWQLQLSRRAIRTSQAFSK 145 (646)
Q Consensus 66 ~~al~~~lP~~~RVN~~k~~~~~~l~~~L~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~l~~~~~~~~ 145 (646)
|+++++++|+++|||++| ++++++.+.|++.++ ...+ +|+|+++.+ ......+...+.|
T Consensus 2 m~~~~~~~~~~~rvn~~~-~~~~~~~~~l~~~g~---------------~~~~-~~~~~~~~~--~~~~~~~~~~~~~-- 60 (274)
T 3ajd_A 2 MIVYKGEKMQFIRVNTLK-INPEVLKKRLENKGV---------------VLEK-TFLDYAFEV--KKSPFSIGSTPEY-- 60 (274)
T ss_dssp -------CCEEEEECTTT-CCHHHHHHHHHTTTC---------------EEEE-CSSTTEEEE--EECSSCTTSSHHH--
T ss_pred hhhhCCCCCeEEEEeCCC-CCHHHHHHHHHHCCC---------------eecC-CCCCceEEE--ecCCCCcccChhh--
Confidence 677889999999999999 999999888876542 1235 899986543 1112345666665
Q ss_pred hhhhhhcccccccEEEecccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHH
Q psy17365 146 LHQFLIMENATGHISRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYML 225 (646)
Q Consensus 146 ~~~fl~~~~~~G~i~~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L 225 (646)
..|.+++||.+||+++.++++++|++|||+|||||++|+++++.+. +.+.|+|+|+++.+++.+
T Consensus 61 ---------~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~-------~~~~v~avD~~~~~l~~~ 124 (274)
T 3ajd_A 61 ---------LFGYYMPQSISSMIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMK-------NKGTIVAVEISKTRTKAL 124 (274)
T ss_dssp ---------HTTSEEECCSGGGHHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTT-------TCSEEEEEESCHHHHHHH
T ss_pred ---------hCCeEEEeCHHHHHHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcC-------CCCEEEEECCCHHHHHHH
Confidence 6999999999999999999999999999999999999999999874 458999999999999999
Q ss_pred HHHHHHcCCCCeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHH
Q psy17365 226 VHQAKRLNSPCAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIV 305 (646)
Q Consensus 226 ~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL 305 (646)
++|++++|+.++.++++|+..++.... .....||+|++|+||||.|+++++| .|++.++..+...|.++|
T Consensus 125 ~~~~~~~g~~~v~~~~~D~~~~~~~~~------~~~~~fD~Vl~d~Pcs~~g~~~~~p----~~~~~~~~~~~~~~~~~l 194 (274)
T 3ajd_A 125 KSNINRMGVLNTIIINADMRKYKDYLL------KNEIFFDKILLDAPCSGNIIKDKNR----NVSEEDIKYCSLRQKELI 194 (274)
T ss_dssp HHHHHHTTCCSEEEEESCHHHHHHHHH------HTTCCEEEEEEEECCC----------------HHHHTGGGTCHHHHH
T ss_pred HHHHHHhCCCcEEEEeCChHhcchhhh------hccccCCEEEEcCCCCCCcccccCC----CCCHHHHHHHHHHHHHHH
Confidence 999999999999999999977642110 0024799999999999999999998 688999999999999999
Q ss_pred HHHHHhhccCCeEEEEcCCCCccccHHHHHHHHHHccCcEEEeeccccCCCCccCCCCcccc
Q psy17365 306 KRGVEMLAVGGKIAYSTCSLNPLEDEAVIQRLIVETQGAVQLVDVSAITPALKYAPGLSQWR 367 (646)
Q Consensus 306 ~~A~~lLKpGG~LVYSTCSl~p~ENE~VV~~~L~~~~~~~elv~~~~~lp~l~~~~G~~~w~ 367 (646)
.++.++|||||+|||||||++++|||++|.++|++++ .++++++. ++ ..+|+..|.
T Consensus 195 ~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~~~-~~~~~~~~--~~---~~~~~~~~~ 250 (274)
T 3ajd_A 195 DIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQKRN-DVELIIIK--AN---EFKGINIKE 250 (274)
T ss_dssp HHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHHCS-SEEEECCC--ST---TCTTSCEEE
T ss_pred HHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHhCC-CcEEecCc--cc---cccCccccc
Confidence 9999999999999999999999999999999999986 48988765 22 235666664
No 9
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=100.00 E-value=1.7e-43 Score=388.13 Aligned_cols=241 Identities=27% Similarity=0.438 Sum_probs=211.7
Q ss_pred HHHHHHHHHhCCCCCcEEEEcCCCccCHHHHHHHHHHhhHHhhhcccccccccccCcccccCCCCCceeeeecccccccc
Q psy17365 60 NEWDSMLETLKKDLPTAFRITNCSPEEAKALLSIVESKFFKELVNDQETSEEEKVAPICLPWYPEQMGWQLQLSRRAIRT 139 (646)
Q Consensus 60 ~e~~~f~~al~~~lP~~~RVN~~k~~~~~~l~~~L~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~l~~ 139 (646)
+++++|++++++++|+++|||++| ++++++.+.|++.++ ...+.+|+|+++.+. ....+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~Rvn~~~-~~~~~~~~~l~~~g~---------------~~~~~~~~~~~~~~~---~~~~~~~ 219 (429)
T 1sqg_A 159 EQWQSIVEANNQRPPMWLRINRTH-HSRDSWLALLDEAGM---------------KGFPHADYPDAVRLE---TPAPVHA 219 (429)
T ss_dssp TTHHHHHHHHTSCCCEEEEECTTT-CCHHHHHHHHHHTTC---------------CEECCTTCTTEEEES---SCCCGGG
T ss_pred HHHHHHHHhCCCCCCeEEEEcCCC-CCHHHHHHHHHhCCC---------------ceeecCCCCCEEEEC---CCCCccc
Confidence 679999999999999999999999 999999988876543 234678999976432 2234566
Q ss_pred chhhhhhhhhhhcccccccEEEecccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCH
Q psy17365 140 SQAFSKLHQFLIMENATGHISRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDN 219 (646)
Q Consensus 140 ~~~~~~~~~fl~~~~~~G~i~~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~ 219 (646)
.+.| ..|.+++||.+||+++.++++++|++|||+|||||+||+++++.+ +.|.|+|+|+++
T Consensus 220 ~~~~-----------~~G~~~~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~--------~~~~v~a~D~~~ 280 (429)
T 1sqg_A 220 LPGF-----------EDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA--------PEAQVVAVDIDE 280 (429)
T ss_dssp STTG-----------GGTSEEECCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHC--------TTCEEEEEESST
T ss_pred ChHH-----------hCCCeEeeCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHc--------CCCEEEEECCCH
Confidence 6655 689999999999999999999999999999999999999999986 358999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHH
Q psy17365 220 NRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHG 299 (646)
Q Consensus 220 ~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~ 299 (646)
.|++.+++|++++|.. +.++++|+..++.... ...||+||+||||||.|+++++|++.+.|++.++..++.
T Consensus 281 ~~l~~~~~~~~~~g~~-~~~~~~D~~~~~~~~~--------~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~ 351 (429)
T 1sqg_A 281 QRLSRVYDNLKRLGMK-ATVKQGDGRYPSQWCG--------EQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQ 351 (429)
T ss_dssp TTHHHHHHHHHHTTCC-CEEEECCTTCTHHHHT--------TCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHcCCC-eEEEeCchhhchhhcc--------cCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHH
Confidence 9999999999999984 7889999987653111 147999999999999999999999988999999999999
Q ss_pred HHHHHHHHHHHhhccCCeEEEEcCCCCccccHHHHHHHHHHccCcEEEe
Q psy17365 300 IQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAVIQRLIVETQGAVQLV 348 (646)
Q Consensus 300 lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~VV~~~L~~~~~~~elv 348 (646)
+|..+|.++.++|||||+|||||||++++|||++|.++|+++++ ++++
T Consensus 352 ~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~~~~-~~~~ 399 (429)
T 1sqg_A 352 LQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTAD-AELC 399 (429)
T ss_dssp HHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHHCTT-CEEC
T ss_pred HHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHHHHHhCCC-CEEe
Confidence 99999999999999999999999999999999999999999874 6665
No 10
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.76 E-value=1.5e-18 Score=188.25 Aligned_cols=162 Identities=20% Similarity=0.192 Sum_probs=131.3
Q ss_pred ccccEEEecccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q psy17365 155 ATGHISRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS 234 (646)
Q Consensus 155 ~~G~i~~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~ 234 (646)
++|.+..|..+..+...++ ++|.+|||+|||+|+.|.++|.. +.. |+|+|+|+.+++.+++|++.+|+
T Consensus 194 ~tG~f~dqr~~r~~l~~~~--~~g~~VLDlg~GtG~~sl~~a~~---------ga~-V~avDis~~al~~a~~n~~~ng~ 261 (393)
T 4dmg_A 194 KTGYYLDQRENRRLFEAMV--RPGERVLDVYSYVGGFALRAARK---------GAY-ALAVDKDLEALGVLDQAALRLGL 261 (393)
T ss_dssp TTSSCGGGHHHHHHHHTTC--CTTCEEEEESCTTTHHHHHHHHT---------TCE-EEEEESCHHHHHHHHHHHHHHTC
T ss_pred ccCcCCCHHHHHHHHHHHh--cCCCeEEEcccchhHHHHHHHHc---------CCe-EEEEECCHHHHHHHHHHHHHhCC
Confidence 6889999998887766543 57999999999999999999874 244 99999999999999999999998
Q ss_pred CCeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhcc
Q psy17365 235 PCAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAV 314 (646)
Q Consensus 235 ~ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKp 314 (646)
.+ .+.++|+..+.... ...||+|++||||-.. +..........+.+++..|+++|||
T Consensus 262 ~~-~~~~~D~~~~l~~~---------~~~fD~Ii~dpP~f~~-------------~~~~~~~~~~~~~~ll~~a~~~Lkp 318 (393)
T 4dmg_A 262 RV-DIRHGEALPTLRGL---------EGPFHHVLLDPPTLVK-------------RPEELPAMKRHLVDLVREALRLLAE 318 (393)
T ss_dssp CC-EEEESCHHHHHHTC---------CCCEEEEEECCCCCCS-------------SGGGHHHHHHHHHHHHHHHHHTEEE
T ss_pred CC-cEEEccHHHHHHHh---------cCCCCEEEECCCcCCC-------------CHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 74 46688887653211 1249999999998432 2335567778889999999999999
Q ss_pred CCeEEEEcCCCCccccH--HHHHHHHHHccCcEEEeecc
Q psy17365 315 GGKIAYSTCSLNPLEDE--AVIQRLIVETQGAVQLVDVS 351 (646)
Q Consensus 315 GG~LVYSTCSl~p~ENE--~VV~~~L~~~~~~~elv~~~ 351 (646)
||+|+|+|||.++.+++ .+|.+++.+.+..++++...
T Consensus 319 GG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~~i~~~~ 357 (393)
T 4dmg_A 319 EGFLWLSSCSYHLRLEDLLEVARRAAADLGRRLRVHRVT 357 (393)
T ss_dssp EEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeEEEEEEc
Confidence 99999999999988887 78888888777777777654
No 11
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.74 E-value=1.5e-17 Score=168.16 Aligned_cols=140 Identities=19% Similarity=0.223 Sum_probs=107.9
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~ 252 (646)
+.++||++|||+|||||++|.++|+.++ +.|.|+|+|+++.++..+.+.+++. .|+.++.+|+.......
T Consensus 72 ~~l~~g~~VLDlG~GtG~~t~~la~~v~-------~~G~V~avD~s~~~l~~l~~~a~~r--~nv~~i~~Da~~~~~~~- 141 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGTTISHVSDIIE-------LNGKAYGVEFSPRVVRELLLVAQRR--PNIFPLLADARFPQSYK- 141 (232)
T ss_dssp CSCCTTCEEEEETCTTSHHHHHHHHHHT-------TTSEEEEEECCHHHHHHHHHHHHHC--TTEEEEECCTTCGGGTT-
T ss_pred cCCCCCCEEEEEeecCCHHHHHHHHHhC-------CCCEEEEEECcHHHHHHHHHHhhhc--CCeEEEEcccccchhhh-
Confidence 4589999999999999999999999986 6899999999999987776666543 68999999997643211
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHH-HHhhccCCeEEEE---cC---CC
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRG-VEMLAVGGKIAYS---TC---SL 325 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A-~~lLKpGG~LVYS---TC---Sl 325 (646)
.....||+|++|++- |+ |.++|... .++|||||+||+| || |+
T Consensus 142 ------~~~~~~D~I~~d~a~---------~~----------------~~~il~~~~~~~LkpGG~lvisik~~~~d~t~ 190 (232)
T 3id6_C 142 ------SVVENVDVLYVDIAQ---------PD----------------QTDIAIYNAKFFLKVNGDMLLVIKARSIDVTK 190 (232)
T ss_dssp ------TTCCCEEEEEECCCC---------TT----------------HHHHHHHHHHHHEEEEEEEEEEEC-------C
T ss_pred ------ccccceEEEEecCCC---------hh----------------HHHHHHHHHHHhCCCCeEEEEEEccCCcccCC
Confidence 012479999999861 22 44555544 4499999999977 89 99
Q ss_pred CccccHHHHHHHHHHccCcEEEeeccccCC
Q psy17365 326 NPLEDEAVIQRLIVETQGAVQLVDVSAITP 355 (646)
Q Consensus 326 ~p~ENE~VV~~~L~~~~~~~elv~~~~~lp 355 (646)
+|+||.+.+.++|++++ |++++.....|
T Consensus 191 ~~~e~~~~~~~~L~~~g--f~~~~~~~l~p 218 (232)
T 3id6_C 191 DPKEIYKTEVEKLENSN--FETIQIINLDP 218 (232)
T ss_dssp CSSSSTTHHHHHHHHTT--EEEEEEEECTT
T ss_pred CHHHHHHHHHHHHHHCC--CEEEEEeccCC
Confidence 99999999999999875 88887664444
No 12
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.69 E-value=6.3e-17 Score=174.58 Aligned_cols=164 Identities=18% Similarity=0.168 Sum_probs=130.5
Q ss_pred ccccEEEecccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q psy17365 155 ATGHISRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS 234 (646)
Q Consensus 155 ~~G~i~~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~ 234 (646)
.+|.+..|...+.+...+ +|.+|||+|||+|+.|.++|.. .+.|+|+|+++..++.+++|++.+|+
T Consensus 191 ~~g~f~~~~~~~~~~~~~----~~~~VLDlg~G~G~~~~~la~~----------~~~v~~vD~s~~~~~~a~~n~~~n~~ 256 (382)
T 1wxx_A 191 KTGAYLDQRENRLYMERF----RGERALDVFSYAGGFALHLALG----------FREVVAVDSSAEALRRAEENARLNGL 256 (382)
T ss_dssp CCCCCGGGHHHHHHGGGC----CEEEEEEETCTTTHHHHHHHHH----------EEEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred cCccccchHHHHHHHHhc----CCCeEEEeeeccCHHHHHHHHh----------CCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 568887787776554433 7889999999999999999876 35899999999999999999999999
Q ss_pred CCeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhcc
Q psy17365 235 PCAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAV 314 (646)
Q Consensus 235 ~ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKp 314 (646)
.++.++++|+..+..... .....||.|++|||+.+.+ ..........+.+++..++++|+|
T Consensus 257 ~~~~~~~~d~~~~~~~~~------~~~~~fD~Ii~dpP~~~~~-------------~~~~~~~~~~~~~~l~~~~~~Lkp 317 (382)
T 1wxx_A 257 GNVRVLEANAFDLLRRLE------KEGERFDLVVLDPPAFAKG-------------KKDVERAYRAYKEVNLRAIKLLKE 317 (382)
T ss_dssp TTEEEEESCHHHHHHHHH------HTTCCEEEEEECCCCSCCS-------------TTSHHHHHHHHHHHHHHHHHTEEE
T ss_pred CCceEEECCHHHHHHHHH------hcCCCeeEEEECCCCCCCC-------------hhHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999876532110 0124799999999975532 233456667888999999999999
Q ss_pred CCeEEEEcCCCCcccc--HHHHHHHHHHccCcEEEeecc
Q psy17365 315 GGKIAYSTCSLNPLED--EAVIQRLIVETQGAVQLVDVS 351 (646)
Q Consensus 315 GG~LVYSTCSl~p~EN--E~VV~~~L~~~~~~~elv~~~ 351 (646)
||+|+++||+....++ +.++.+.+.+.+..++++...
T Consensus 318 gG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~~~ 356 (382)
T 1wxx_A 318 GGILATASCSHHMTEPLFYAMVAEAAQDAHRLLRVVEKR 356 (382)
T ss_dssp EEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEEcC
Confidence 9999999999877765 678877777776668887654
No 13
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.65 E-value=2.2e-16 Score=171.10 Aligned_cols=166 Identities=16% Similarity=0.094 Sum_probs=128.6
Q ss_pred ccccEEEecccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q psy17365 155 ATGHISRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS 234 (646)
Q Consensus 155 ~~G~i~~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~ 234 (646)
++|.+..|.....+...+ .+|.+|||+|||+|+.|.++|.. +.+.|+|+|+++..++.+++|++.+|+
T Consensus 201 ~tgff~~~~~~~~~l~~~---~~~~~VLDl~cG~G~~sl~la~~---------g~~~V~~vD~s~~al~~a~~n~~~ngl 268 (396)
T 3c0k_A 201 KTGYYLDQRDSRLATRRY---VENKRVLNCFSYTGGFAVSALMG---------GCSQVVSVDTSQEALDIARQNVELNKL 268 (396)
T ss_dssp TTSSCGGGHHHHHHHHHH---CTTCEEEEESCTTCSHHHHHHHT---------TCSEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred cCCcCcCHHHHHHHHHHh---hCCCeEEEeeccCCHHHHHHHHC---------CCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 568887777776555443 57899999999999999999864 356899999999999999999999998
Q ss_pred -C-CeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhh
Q psy17365 235 -P-CAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEML 312 (646)
Q Consensus 235 -~-ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lL 312 (646)
. ++.++++|+..+..... .....||.|++|||+.+.+. .........+..++..++++|
T Consensus 269 ~~~~v~~~~~D~~~~~~~~~------~~~~~fD~Ii~dpP~~~~~~-------------~~~~~~~~~~~~~l~~~~~~L 329 (396)
T 3c0k_A 269 DLSKAEFVRDDVFKLLRTYR------DRGEKFDVIVMDPPKFVENK-------------SQLMGACRGYKDINMLAIQLL 329 (396)
T ss_dssp CGGGEEEEESCHHHHHHHHH------HTTCCEEEEEECCSSTTTCS-------------SSSSCCCTHHHHHHHHHHHTE
T ss_pred CccceEEEECCHHHHHHHHH------hcCCCCCEEEECCCCCCCCh-------------hHHHHHHHHHHHHHHHHHHhc
Confidence 6 89999999876532110 00247999999999765431 112233345678999999999
Q ss_pred ccCCeEEEEcCCCCcc--ccHHHHHHHHHHccCcEEEeecc
Q psy17365 313 AVGGKIAYSTCSLNPL--EDEAVIQRLIVETQGAVQLVDVS 351 (646)
Q Consensus 313 KpGG~LVYSTCSl~p~--ENE~VV~~~L~~~~~~~elv~~~ 351 (646)
+|||+|++|+|+.... +++.+|.+.+.+.+..++++...
T Consensus 330 kpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~~~ 370 (396)
T 3c0k_A 330 NEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQF 370 (396)
T ss_dssp EEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred CCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEEEEEEC
Confidence 9999999999997665 77889988888777667777643
No 14
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.63 E-value=5.5e-16 Score=167.85 Aligned_cols=165 Identities=16% Similarity=0.095 Sum_probs=126.2
Q ss_pred ccccEEEecccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q psy17365 155 ATGHISRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS 234 (646)
Q Consensus 155 ~~G~i~~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~ 234 (646)
++|.+..|.....+...++ ++|.+|||+|||+|+.|.++|.. +.+.|+|+|+++..++.+++|++.+|+
T Consensus 197 ~tg~f~~~~~~~~~~~~~~--~~~~~VLDl~~G~G~~~~~la~~---------g~~~v~~vD~s~~~l~~a~~n~~~n~~ 265 (396)
T 2as0_A 197 KTGFFLDQRENRLALEKWV--QPGDRVLDVFTYTGGFAIHAAIA---------GADEVIGIDKSPRAIETAKENAKLNGV 265 (396)
T ss_dssp SSCCCSTTHHHHHHHGGGC--CTTCEEEETTCTTTHHHHHHHHT---------TCSEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred ccCccCCHHHHHHHHHHHh--hCCCeEEEecCCCCHHHHHHHHC---------CCCEEEEEeCCHHHHHHHHHHHHHcCC
Confidence 4577766666655544432 58899999999999999999864 356899999999999999999999998
Q ss_pred C-CeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhc
Q psy17365 235 P-CAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLA 313 (646)
Q Consensus 235 ~-ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLK 313 (646)
. ++.++++|+..+..... .....||.|++|||+.+.. ..........+..++..++++|+
T Consensus 266 ~~~v~~~~~d~~~~~~~~~------~~~~~fD~Vi~dpP~~~~~-------------~~~~~~~~~~~~~~l~~~~~~Lk 326 (396)
T 2as0_A 266 EDRMKFIVGSAFEEMEKLQ------KKGEKFDIVVLDPPAFVQH-------------EKDLKAGLRAYFNVNFAGLNLVK 326 (396)
T ss_dssp GGGEEEEESCHHHHHHHHH------HTTCCEEEEEECCCCSCSS-------------GGGHHHHHHHHHHHHHHHHTTEE
T ss_pred CccceEEECCHHHHHHHHH------hhCCCCCEEEECCCCCCCC-------------HHHHHHHHHHHHHHHHHHHHhcC
Confidence 7 89999999876532110 0124799999999965432 23344556778899999999999
Q ss_pred cCCeEEEEcCCCCccc--cHHHHHHHHHHccCcEEEee
Q psy17365 314 VGGKIAYSTCSLNPLE--DEAVIQRLIVETQGAVQLVD 349 (646)
Q Consensus 314 pGG~LVYSTCSl~p~E--NE~VV~~~L~~~~~~~elv~ 349 (646)
|||+|+|+||+.+..+ .+.++.+++.+.+..++++.
T Consensus 327 pgG~lv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~ 364 (396)
T 2as0_A 327 DGGILVTCSCSQHVDLQMFKDMIIAAGAKAGKFLKMLE 364 (396)
T ss_dssp EEEEEEEEECCTTSCHHHHHHHHHHHHHHTTEEEEESS
T ss_pred CCcEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEe
Confidence 9999999999966554 46777777776655566665
No 15
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.62 E-value=8.1e-16 Score=178.31 Aligned_cols=172 Identities=12% Similarity=0.057 Sum_probs=127.8
Q ss_pred ccccCCCCCceeeeeccccccccchhhhhhhhhhhcccccccEEEecccccccccccCCCCCCeEEEEcCCCchHHHHHH
Q psy17365 117 ICLPWYPEQMGWQLQLSRRAIRTSQAFSKLHQFLIMENATGHISRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQII 196 (646)
Q Consensus 117 ~~~~~~p~~l~~~~~~~~~~l~~~~~~~~~~~fl~~~~~~G~i~~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~la 196 (646)
..+++.++|+.|.++.... .++|.+..|.....+...+ .+|.+|||+|||+|+.|.++|
T Consensus 500 ~~~~v~E~g~~~~v~~~~~------------------~~tG~f~d~r~~r~~l~~~---~~g~~VLDlg~GtG~~sl~aa 558 (703)
T 3v97_A 500 EFLEVTEYNAHLWVNLTDY------------------LDTGLFLDHRIARRMLGQM---SKGKDFLNLFSYTGSATVHAG 558 (703)
T ss_dssp CCEEEEETTEEEEECSSSS------------------SSCSCCGGGHHHHHHHHHH---CTTCEEEEESCTTCHHHHHHH
T ss_pred ceEEEEECCEEEEEecccc------------------ccCCCcccHHHHHHHHHHh---cCCCcEEEeeechhHHHHHHH
Confidence 3455566777766554211 1678888888877665443 378999999999999999988
Q ss_pred HHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC--CeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCC
Q psy17365 197 EMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP--CAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCT 274 (646)
Q Consensus 197 e~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~--ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCS 274 (646)
.. +...|+|+|+|+..++.+++|++++|+. ++.++++|+..+.... ...||+|++||||.
T Consensus 559 ~~---------ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~---------~~~fD~Ii~DPP~f 620 (703)
T 3v97_A 559 LG---------GARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA---------NEQFDLIFIDPPTF 620 (703)
T ss_dssp HT---------TCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHC---------CCCEEEEEECCCSB
T ss_pred HC---------CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhc---------CCCccEEEECCccc
Confidence 63 4668999999999999999999999987 7999999987643211 25799999999987
Q ss_pred CCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHHHHHHHHHcc
Q psy17365 275 GDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAVIQRLIVETQ 342 (646)
Q Consensus 275 G~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~VV~~~L~~~~ 342 (646)
+.+. ...........+.+++..+.++|+|||+|++|||+-....+++ .|.+.+
T Consensus 621 ~~~~-----------~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~~~----~l~~~g 673 (703)
T 3v97_A 621 SNSK-----------RMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLD----GLAKLG 673 (703)
T ss_dssp C------------------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCCHH----HHHHTT
T ss_pred cCCc-----------cchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccCHH----HHHHcC
Confidence 6442 1112234567788999999999999999999999966666644 345554
No 16
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.59 E-value=1.4e-15 Score=164.54 Aligned_cols=171 Identities=12% Similarity=0.078 Sum_probs=121.6
Q ss_pred ccccEEEecccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q psy17365 155 ATGHISRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS 234 (646)
Q Consensus 155 ~~G~i~~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~ 234 (646)
++|.|..|.....+...++ .+|.+|||+|||+|+.+.++|.. +...|+|+|+++..++.+++|++.+|+
T Consensus 192 ~t~ff~~~~~~~~~~~~~~--~~~~~VLDl~cGtG~~sl~la~~---------ga~~V~~vD~s~~al~~A~~N~~~n~~ 260 (385)
T 2b78_A 192 MTGIFLDQRQVRNELINGS--AAGKTVLNLFSYTAAFSVAAAMG---------GAMATTSVDLAKRSRALSLAHFEANHL 260 (385)
T ss_dssp CCSSCGGGHHHHHHHHHTT--TBTCEEEEETCTTTHHHHHHHHT---------TBSEEEEEESCTTHHHHHHHHHHHTTC
T ss_pred cCCcCCcHHHHHHHHHHHh--cCCCeEEEEeeccCHHHHHHHHC---------CCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 3466655555544443333 67899999999999999999864 356899999999999999999999998
Q ss_pred C--CeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhh
Q psy17365 235 P--CAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEML 312 (646)
Q Consensus 235 ~--ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lL 312 (646)
. ++.++++|+..+..... .....||.|++|||+.+.+. .........+.+++..+.++|
T Consensus 261 ~~~~v~~~~~D~~~~l~~~~------~~~~~fD~Ii~DPP~~~~~~-------------~~~~~~~~~~~~ll~~~~~~L 321 (385)
T 2b78_A 261 DMANHQLVVMDVFDYFKYAR------RHHLTYDIIIIDPPSFARNK-------------KEVFSVSKDYHKLIRQGLEIL 321 (385)
T ss_dssp CCTTEEEEESCHHHHHHHHH------HTTCCEEEEEECCCCC------------------CCCCHHHHHHHHHHHHHHTE
T ss_pred CccceEEEECCHHHHHHHHH------HhCCCccEEEECCCCCCCCh-------------hhHHHHHHHHHHHHHHHHHhc
Confidence 7 89999999876422110 01247999999999865321 112234556678999999999
Q ss_pred ccCCeEEEEcCCCC--ccccHHHHHHHHHHccCcEEEeeccccCCCC
Q psy17365 313 AVGGKIAYSTCSLN--PLEDEAVIQRLIVETQGAVQLVDVSAITPAL 357 (646)
Q Consensus 313 KpGG~LVYSTCSl~--p~ENE~VV~~~L~~~~~~~elv~~~~~lp~l 357 (646)
+|||.|++|+|+-. ..+...++..++.+.+.. ++.....-|++
T Consensus 322 ~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~--~~~~~~~~~D~ 366 (385)
T 2b78_A 322 SENGLIIASTNAANMTVSQFKKQIEKGFGKQKHT--YLDLQQLPSDF 366 (385)
T ss_dssp EEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCCE--EEEEECCCTTS
T ss_pred CCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCc--EEEeCCCCCCC
Confidence 99999999999855 455667777777666543 55443333333
No 17
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.53 E-value=4.6e-14 Score=143.47 Aligned_cols=159 Identities=13% Similarity=0.178 Sum_probs=109.5
Q ss_pred ccccccccCCC-CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEecC
Q psy17365 166 SMIPPLLLDVQ-THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CAIITNHD 243 (646)
Q Consensus 166 Sml~~~~Ld~~-pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni~v~~~D 243 (646)
+.+.+.++.++ ++.+|||+|||+|..+..+++. ..+.|+|+|+++..++.+++|+++++.. ++.++++|
T Consensus 37 ~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~---------~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D 107 (259)
T 3lpm_A 37 AVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTR---------TKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYD 107 (259)
T ss_dssp HHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTT---------CCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSC
T ss_pred HHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHh---------cCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECc
Confidence 66777778888 9999999999999999988865 2349999999999999999999999987 59999999
Q ss_pred CCCCccccccCCCCCCCCCCCCeeecCCCCCCC-cccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 244 ASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGD-GTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 244 a~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~-G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
+..++... ....||.|++|+||... +.-..+|+..... . ..........++..+.++|||||++++.
T Consensus 108 ~~~~~~~~--------~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~--a-~~~~~~~~~~~l~~~~~~LkpgG~l~~~- 175 (259)
T 3lpm_A 108 LKKITDLI--------PKERADIVTCNPPYFATPDTSLKNTNEHFRI--A-RHEVMCTLEDTIRVAASLLKQGGKANFV- 175 (259)
T ss_dssp GGGGGGTS--------CTTCEEEEEECCCC--------------------------HHHHHHHHHHHHHEEEEEEEEEE-
T ss_pred HHHhhhhh--------ccCCccEEEECCCCCCCccccCCCCchHHHh--h-hccccCCHHHHHHHHHHHccCCcEEEEE-
Confidence 98765311 12579999999999776 3223333321111 0 1111223457899999999999999985
Q ss_pred CCCCccccHHHHHHHHHHccCcEEEeec
Q psy17365 323 CSLNPLEDEAVIQRLIVETQGAVQLVDV 350 (646)
Q Consensus 323 CSl~p~ENE~VV~~~L~~~~~~~elv~~ 350 (646)
.+.+....+..++++++ ++...+
T Consensus 176 ---~~~~~~~~~~~~l~~~~--~~~~~~ 198 (259)
T 3lpm_A 176 ---HRPERLLDIIDIMRKYR--LEPKRI 198 (259)
T ss_dssp ---ECTTTHHHHHHHHHHTT--EEEEEE
T ss_pred ---EcHHHHHHHHHHHHHCC--CceEEE
Confidence 24455556667777765 444443
No 18
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.53 E-value=1.1e-14 Score=154.50 Aligned_cols=164 Identities=14% Similarity=0.068 Sum_probs=114.5
Q ss_pred ccccEEEecccccccccccC-CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcC
Q psy17365 155 ATGHISRQEAVSMIPPLLLD-VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLN 233 (646)
Q Consensus 155 ~~G~i~~Qd~~Sml~~~~Ld-~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg 233 (646)
..|++..|..........+. ..++.+|||+|||+|+.+..++.. +. .|+|+|+|+..++.+++|++.++
T Consensus 130 ~tg~f~dq~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~---------ga-~V~~VD~s~~al~~a~~n~~~~g 199 (332)
T 2igt_A 130 HVGVFPEQIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAA---------GA-EVTHVDASKKAIGWAKENQVLAG 199 (332)
T ss_dssp CCSCCGGGHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHT---------TC-EEEEECSCHHHHHHHHHHHHHHT
T ss_pred cceechHHHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHc---------CC-EEEEEECCHHHHHHHHHHHHHcC
Confidence 46777777766544443343 457889999999999999998864 24 89999999999999999999999
Q ss_pred CCC--eEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHh
Q psy17365 234 SPC--AIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEM 311 (646)
Q Consensus 234 ~~n--i~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~l 311 (646)
+.+ +.++++|+..+..... .....||.|++||||.+.+. ..+ +......+..++..+.++
T Consensus 200 l~~~~v~~i~~D~~~~l~~~~------~~~~~fD~Ii~dPP~~~~~~---~~~---------~~~~~~~~~~ll~~~~~~ 261 (332)
T 2igt_A 200 LEQAPIRWICEDAMKFIQREE------RRGSTYDIILTDPPKFGRGT---HGE---------VWQLFDHLPLMLDICREI 261 (332)
T ss_dssp CTTSCEEEECSCHHHHHHHHH------HHTCCBSEEEECCCSEEECT---TCC---------EEEHHHHHHHHHHHHHHT
T ss_pred CCccceEEEECcHHHHHHHHH------hcCCCceEEEECCccccCCc---hHH---------HHHHHHHHHHHHHHHHHh
Confidence 875 8999999876532110 00247999999999977652 111 123345567899999999
Q ss_pred hccCCe-EEEEcCCCCc--cccHHHHHHHHHHccCcEE
Q psy17365 312 LAVGGK-IAYSTCSLNP--LEDEAVIQRLIVETQGAVQ 346 (646)
Q Consensus 312 LKpGG~-LVYSTCSl~p--~ENE~VV~~~L~~~~~~~e 346 (646)
|+|||. ++.++|+... .+-+.++.+++.+.+..++
T Consensus 262 LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 262 LSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp BCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred cCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 999999 5556666542 2223444444445544444
No 19
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.51 E-value=1.7e-13 Score=145.83 Aligned_cols=133 Identities=21% Similarity=0.293 Sum_probs=108.5
Q ss_pred ccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcc
Q psy17365 170 PLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPN 249 (646)
Q Consensus 170 ~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~ 249 (646)
..++.++++..|||+|||+|..+..+|.+.+ +.+.|+|+|+|+..++.+++|+++.|+.++.+.++|+..++.
T Consensus 196 ~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~-------~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~ 268 (354)
T 3tma_A 196 LRLADARPGMRVLDPFTGSGTIALEAASTLG-------PTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPR 268 (354)
T ss_dssp HHHTTCCTTCCEEESSCTTSHHHHHHHHHHC-------TTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGG
T ss_pred HHHhCCCCCCEEEeCCCCcCHHHHHHHHhhC-------CCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCcc
Confidence 3445778999999999999999999998752 357899999999999999999999998899999999988653
Q ss_pred ccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccc
Q psy17365 250 VLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLE 329 (646)
Q Consensus 250 ~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~E 329 (646)
. ...||.|++||||.- .......+..++..++..+.++|||||+++++||
T Consensus 269 ~----------~~~~D~Ii~npPyg~--------------r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~------ 318 (354)
T 3tma_A 269 F----------FPEVDRILANPPHGL--------------RLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL------ 318 (354)
T ss_dssp T----------CCCCSEEEECCCSCC------------------CHHHHHHHHHHHHHHHHTSCTTCEEEEEES------
T ss_pred c----------cCCCCEEEECCCCcC--------------ccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC------
Confidence 1 135899999999731 1122345677888999999999999999999987
Q ss_pred cHHHHHHHHH
Q psy17365 330 DEAVIQRLIV 339 (646)
Q Consensus 330 NE~VV~~~L~ 339 (646)
|+..+..+++
T Consensus 319 ~~~~~~~~~~ 328 (354)
T 3tma_A 319 RPALLKRALP 328 (354)
T ss_dssp CHHHHHHHCC
T ss_pred CHHHHHHHhh
Confidence 4666777766
No 20
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.48 E-value=1.1e-13 Score=142.11 Aligned_cols=143 Identities=12% Similarity=0.142 Sum_probs=108.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCC
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~ 255 (646)
.++.+|||+|||+|..+..++... +...|+|+|+|+..++.+++|++++|..++.+.++|+.....
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~--------~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~------ 173 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASER--------PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA------ 173 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHC--------TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT------
T ss_pred cCCCEEEEecCCccHHHHHHHHhC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc------
Confidence 567899999999999999999765 467999999999999999999999999899999999865311
Q ss_pred CCCCCCCCCCeeecCCCCCCCcccccCccccccCCcc----hhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccH
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPS----NGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDE 331 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~----~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE 331 (646)
...||.|++++||.+.+...-.++++. +.+. ........+..++..+.++|||||+++++++. .+.
T Consensus 174 -----~~~fD~Iv~npPy~~~~~~~l~~~v~~-~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~----~~~ 243 (276)
T 2b3t_A 174 -----GQQFAMIVSNPPYIDEQDPHLQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW----QQG 243 (276)
T ss_dssp -----TCCEEEEEECCCCBCTTCHHHHSSGGG-SSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCS----SCH
T ss_pred -----cCCccEEEECCCCCCccccccChhhhh-cCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECc----hHH
Confidence 247999999999998754211222221 1111 11122345678999999999999999998554 345
Q ss_pred HHHHHHHHHcc
Q psy17365 332 AVIQRLIVETQ 342 (646)
Q Consensus 332 ~VV~~~L~~~~ 342 (646)
..+.++|++.+
T Consensus 244 ~~~~~~l~~~G 254 (276)
T 2b3t_A 244 EAVRQAFILAG 254 (276)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHCC
Confidence 56777787765
No 21
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.46 E-value=4.3e-13 Score=130.76 Aligned_cols=147 Identities=15% Similarity=0.113 Sum_probs=114.0
Q ss_pred cccEEEecccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q psy17365 156 TGHISRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP 235 (646)
Q Consensus 156 ~G~i~~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ 235 (646)
.|.++.++... +....++++++.+|||+|||+|..+..++... +.+.|+|+|+++.+++.+++++++.|..
T Consensus 20 ~g~~~~~~i~~-~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~--------~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 90 (204)
T 3e05_A 20 KKLITKQEVRA-VTLSKLRLQDDLVMWDIGAGSASVSIEASNLM--------PNGRIFALERNPQYLGFIRDNLKKFVAR 90 (204)
T ss_dssp TTTSCCHHHHH-HHHHHTTCCTTCEEEEETCTTCHHHHHHHHHC--------TTSEEEEEECCHHHHHHHHHHHHHHTCT
T ss_pred CCcCChHHHHH-HHHHHcCCCCCCEEEEECCCCCHHHHHHHHHC--------CCCEEEEEeCCHHHHHHHHHHHHHhCCC
Confidence 45554444433 33445688999999999999999999999873 4689999999999999999999999998
Q ss_pred CeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccC
Q psy17365 236 CAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVG 315 (646)
Q Consensus 236 ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpG 315 (646)
++.++.+|+..... ....||.|+++.+.. + ...++..+.++||||
T Consensus 91 ~v~~~~~d~~~~~~----------~~~~~D~i~~~~~~~---------~----------------~~~~l~~~~~~Lkpg 135 (204)
T 3e05_A 91 NVTLVEAFAPEGLD----------DLPDPDRVFIGGSGG---------M----------------LEEIIDAVDRRLKSE 135 (204)
T ss_dssp TEEEEECCTTTTCT----------TSCCCSEEEESCCTT---------C----------------HHHHHHHHHHHCCTT
T ss_pred cEEEEeCChhhhhh----------cCCCCCEEEECCCCc---------C----------------HHHHHHHHHHhcCCC
Confidence 99999999865321 114699999987531 1 136899999999999
Q ss_pred CeEEEEcCCCCccccHHHHHHHHHHccCcEEEee
Q psy17365 316 GKIAYSTCSLNPLEDEAVIQRLIVETQGAVQLVD 349 (646)
Q Consensus 316 G~LVYSTCSl~p~ENE~VV~~~L~~~~~~~elv~ 349 (646)
|+|++++++. ++...+...+++++-.++++.
T Consensus 136 G~l~~~~~~~---~~~~~~~~~l~~~g~~~~~~~ 166 (204)
T 3e05_A 136 GVIVLNAVTL---DTLTKAVEFLEDHGYMVEVAC 166 (204)
T ss_dssp CEEEEEECBH---HHHHHHHHHHHHTTCEEEEEE
T ss_pred eEEEEEeccc---ccHHHHHHHHHHCCCceeEEE
Confidence 9999987765 567777788888764444444
No 22
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.46 E-value=1.6e-14 Score=155.89 Aligned_cols=122 Identities=15% Similarity=0.068 Sum_probs=98.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHc---------------CCCCeEEEe
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRL---------------NSPCAIITN 241 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rl---------------g~~ni~v~~ 241 (646)
++.+|||+|||+|..++++|..+ +...|+|+|+++.+++++++|++++ |+.++.+++
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~--------~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~ 118 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALET--------PAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINH 118 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHS--------SCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEE
T ss_pred CCCEEEECCCchhHHHHHHHHhC--------CCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEc
Confidence 68899999999999999999875 3457999999999999999999999 887899999
Q ss_pred cCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 242 HDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 242 ~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
+|+..+.... ...||+|++||||+. ..+|..|+++||+|| ++|.
T Consensus 119 ~Da~~~~~~~---------~~~fD~I~lDP~~~~--------------------------~~~l~~a~~~lk~gG-~l~v 162 (378)
T 2dul_A 119 DDANRLMAER---------HRYFHFIDLDPFGSP--------------------------MEFLDTALRSAKRRG-ILGV 162 (378)
T ss_dssp SCHHHHHHHS---------TTCEEEEEECCSSCC--------------------------HHHHHHHHHHEEEEE-EEEE
T ss_pred CcHHHHHHhc---------cCCCCEEEeCCCCCH--------------------------HHHHHHHHHhcCCCC-EEEE
Confidence 9997653211 146999999999763 267999999999999 7788
Q ss_pred cCCCCccccHHHHHHHHHHcc
Q psy17365 322 TCSLNPLEDEAVIQRLIVETQ 342 (646)
Q Consensus 322 TCSl~p~ENE~VV~~~L~~~~ 342 (646)
||+-....+.......+++++
T Consensus 163 t~td~~~l~~~~~~~~~~~yg 183 (378)
T 2dul_A 163 TATDGAPLCGAHPRACLRKYL 183 (378)
T ss_dssp EECCHHHHTTSSHHHHHHHHS
T ss_pred EeecchhhccccHHHHHHHcc
Confidence 998655433334455666665
No 23
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.46 E-value=3.2e-13 Score=139.98 Aligned_cols=130 Identities=21% Similarity=0.202 Sum_probs=103.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC-eEEEecCCCCCcccccc
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC-AIITNHDASVMPNVLYT 253 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n-i~v~~~Da~~~p~~~~~ 253 (646)
+++|++|||||||+|+.|+++|.. +...|+|+|+|+..++.+++|++++|+.+ +.++++|+..++.
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~---------g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~---- 189 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVY---------GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG---- 189 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHH---------TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC----
T ss_pred cCCCCEEEEecCcCcHHHHHHHHh---------cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc----
Confidence 578999999999999999999865 35689999999999999999999999876 8899999988753
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE-cCC--CCcccc
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS-TCS--LNPLED 330 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS-TCS--l~p~EN 330 (646)
...||+|++|+|++.. ..|..|+++||+||.|.|. .+. ..+.+-
T Consensus 190 -------~~~~D~Vi~~~p~~~~--------------------------~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~ 236 (278)
T 3k6r_A 190 -------ENIADRILMGYVVRTH--------------------------EFIPKALSIAKDGAIIHYHNTVPEKLMPREP 236 (278)
T ss_dssp -------CSCEEEEEECCCSSGG--------------------------GGHHHHHHHEEEEEEEEEEEEEEGGGTTTTT
T ss_pred -------ccCCCEEEECCCCcHH--------------------------HHHHHHHHHcCCCCEEEEEeeecccccchhH
Confidence 2579999999996642 2477889999999998653 222 233444
Q ss_pred HHHHHHHHHHccCcEEEeec
Q psy17365 331 EAVIQRLIVETQGAVQLVDV 350 (646)
Q Consensus 331 E~VV~~~L~~~~~~~elv~~ 350 (646)
.+.+..+.+..+..++.+..
T Consensus 237 ~e~i~~~~~~~g~~v~~~~~ 256 (278)
T 3k6r_A 237 FETFKRITKEYGYDVEKLNE 256 (278)
T ss_dssp HHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHcCCcEEEEEE
Confidence 56778888877765655543
No 24
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.46 E-value=3.6e-14 Score=153.70 Aligned_cols=125 Identities=18% Similarity=0.078 Sum_probs=99.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC--eEEEecCCCCCcc-ccc
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC--AIITNHDASVMPN-VLY 252 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n--i~v~~~Da~~~p~-~~~ 252 (646)
++|.+|||+|||+|++++.+|..+. +.+.|+|+|+++.+++.+++|++++|+.+ +.++++|+..+.. ..
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~-------ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~- 122 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETS-------CVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEW- 122 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCS-------CEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCC-
T ss_pred CCCCEEEECCCcccHHHHHHHHhCC-------CCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhh-
Confidence 5789999999999999999998642 35789999999999999999999999987 9999999976532 11
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHH
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEA 332 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~ 332 (646)
...||+|++||+|+. ..++..|+++|++|| ++|+||+-.......
T Consensus 123 --------~~~fD~V~lDP~g~~--------------------------~~~l~~a~~~Lk~gG-ll~~t~t~~~~l~g~ 167 (392)
T 3axs_A 123 --------GFGFDYVDLDPFGTP--------------------------VPFIESVALSMKRGG-ILSLTATDTAPLSGT 167 (392)
T ss_dssp --------SSCEEEEEECCSSCC--------------------------HHHHHHHHHHEEEEE-EEEEEECCHHHHTTS
T ss_pred --------CCCCcEEEECCCcCH--------------------------HHHHHHHHHHhCCCC-EEEEEecchhhhccc
Confidence 246999999997431 147889999999999 778999765533322
Q ss_pred HHHHHHHHccC
Q psy17365 333 VIQRLIVETQG 343 (646)
Q Consensus 333 VV~~~L~~~~~ 343 (646)
.+...+++|+.
T Consensus 168 ~~~~~~rkYg~ 178 (392)
T 3axs_A 168 YPKTCMRRYMA 178 (392)
T ss_dssp SHHHHHHHHSS
T ss_pred cHHHHHHHhCC
Confidence 44556677763
No 25
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.45 E-value=3.1e-13 Score=139.44 Aligned_cols=128 Identities=20% Similarity=0.163 Sum_probs=105.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC-eEEEecCCCCCcccccc
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC-AIITNHDASVMPNVLYT 253 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n-i~v~~~Da~~~p~~~~~ 253 (646)
+++|.+|||+|||+|+.|..+|... ...|+|+|+++..++.+++|++.+|+.+ +.++++|+..++.
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~---------~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~---- 189 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYG---------KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG---- 189 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHT---------CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC----
T ss_pred CCCCCEEEEecccCCHHHHHHHHhC---------CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc----
Confidence 4679999999999999999998762 2389999999999999999999999886 8899999987653
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC---Ccccc
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL---NPLED 330 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl---~p~EN 330 (646)
...||+|++|+|++. ..++..+.++|||||+|++++|+- ...+.
T Consensus 190 -------~~~fD~Vi~~~p~~~--------------------------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~ 236 (278)
T 2frn_A 190 -------ENIADRILMGYVVRT--------------------------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREP 236 (278)
T ss_dssp -------CSCEEEEEECCCSSG--------------------------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTT
T ss_pred -------cCCccEEEECCchhH--------------------------HHHHHHHHHHCCCCeEEEEEEeeccccccccH
Confidence 257999999999433 145788999999999999999983 34556
Q ss_pred HHHHHHHHHHccCcEEEe
Q psy17365 331 EAVIQRLIVETQGAVQLV 348 (646)
Q Consensus 331 E~VV~~~L~~~~~~~elv 348 (646)
.+.+..++++.+..++.+
T Consensus 237 ~~~i~~~~~~~G~~~~~~ 254 (278)
T 2frn_A 237 FETFKRITKEYGYDVEKL 254 (278)
T ss_dssp HHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHcCCeeEEe
Confidence 667788888887655553
No 26
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.44 E-value=4.3e-13 Score=137.60 Aligned_cols=146 Identities=10% Similarity=0.154 Sum_probs=103.5
Q ss_pred cccEEEecccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHc-CC
Q psy17365 156 TGHISRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRL-NS 234 (646)
Q Consensus 156 ~G~i~~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rl-g~ 234 (646)
.+....++..+.+....++++++.+|||+|||+|..+.++++.+. +.+.|+++|+++.+++.+++++++. |.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~-------~~~~v~~vD~s~~~~~~a~~~~~~~~g~ 161 (275)
T 1yb2_A 89 RNTQIISEIDASYIIMRCGLRPGMDILEVGVGSGNMSSYILYALN-------GKGTLTVVERDEDNLKKAMDNLSEFYDI 161 (275)
T ss_dssp -----------------CCCCTTCEEEEECCTTSHHHHHHHHHHT-------TSSEEEEECSCHHHHHHHHHHHHTTSCC
T ss_pred ccccccChhhHHHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcC-------CCCEEEEEECCHHHHHHHHHHHHhcCCC
Confidence 344555666666667778899999999999999999999998864 5689999999999999999999998 88
Q ss_pred CCeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhcc
Q psy17365 235 PCAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAV 314 (646)
Q Consensus 235 ~ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKp 314 (646)
.++.+..+|+.... ....||+|++|+| +|+ .+|..+.++|||
T Consensus 162 ~~v~~~~~d~~~~~-----------~~~~fD~Vi~~~~---------~~~------------------~~l~~~~~~Lkp 203 (275)
T 1yb2_A 162 GNVRTSRSDIADFI-----------SDQMYDAVIADIP---------DPW------------------NHVQKIASMMKP 203 (275)
T ss_dssp TTEEEECSCTTTCC-----------CSCCEEEEEECCS---------CGG------------------GSHHHHHHTEEE
T ss_pred CcEEEEECchhccC-----------cCCCccEEEEcCc---------CHH------------------HHHHHHHHHcCC
Confidence 89999999987521 1247999999877 221 468899999999
Q ss_pred CCeEEEEcCCCCccccHHHHHHHHHHccCcEEEeecc
Q psy17365 315 GGKIAYSTCSLNPLEDEAVIQRLIVETQGAVQLVDVS 351 (646)
Q Consensus 315 GG~LVYSTCSl~p~ENE~VV~~~L~~~~~~~elv~~~ 351 (646)
||+|++++|+.. ....+...|++.+ +..+++.
T Consensus 204 gG~l~i~~~~~~---~~~~~~~~l~~~G--f~~~~~~ 235 (275)
T 1yb2_A 204 GSVATFYLPNFD---QSEKTVLSLSASG--MHHLETV 235 (275)
T ss_dssp EEEEEEEESSHH---HHHHHHHHSGGGT--EEEEEEE
T ss_pred CCEEEEEeCCHH---HHHHHHHHHHHCC--CeEEEEE
Confidence 999999998763 3333444555543 6666554
No 27
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.43 E-value=4.7e-13 Score=135.27 Aligned_cols=110 Identities=16% Similarity=0.191 Sum_probs=89.6
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~ 252 (646)
|+++||++|||+|||+|..|.++|+.++ ++|.|+|+|+++.+++.+++++++. +|+..+..|+.......
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG-------~~G~V~avD~s~~~~~~l~~~a~~~--~ni~~V~~d~~~p~~~~- 142 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIG-------PRGRIYGVEFAPRVMRDLLTVVRDR--RNIFPILGDARFPEKYR- 142 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHC-------TTCEEEEEECCHHHHHHHHHHSTTC--TTEEEEESCTTCGGGGT-
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhC-------CCceEEEEeCCHHHHHHHHHhhHhh--cCeeEEEEeccCccccc-
Confidence 5689999999999999999999999986 7999999999999999998887654 58888888887643221
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
.....+|.|++|.+...+ ....+.++.++|||||+++.+.
T Consensus 143 ------~~~~~vDvVf~d~~~~~~------------------------~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 143 ------HLVEGVDGLYADVAQPEQ------------------------AAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp ------TTCCCEEEEEECCCCTTH------------------------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------cccceEEEEEEeccCChh------------------------HHHHHHHHHHhccCCCEEEEEE
Confidence 113579999999884321 1357889999999999999763
No 28
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.41 E-value=4.1e-13 Score=132.83 Aligned_cols=115 Identities=15% Similarity=0.129 Sum_probs=94.5
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcC-----CCCeEEEecCCCCCc
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLN-----SPCAIITNHDASVMP 248 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg-----~~ni~v~~~Da~~~p 248 (646)
.++++.+|||+|||+|..|.++++.++ +.+.|+++|+++.+++.+++++.+.+ ..++.+...|+...+
T Consensus 74 ~~~~~~~vLDiG~G~G~~~~~la~~~~-------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 146 (226)
T 1i1n_A 74 QLHEGAKALDVGSGSGILTACFARMVG-------CTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY 146 (226)
T ss_dssp TSCTTCEEEEETCTTSHHHHHHHHHHC-------TTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC
T ss_pred hCCCCCEEEEEcCCcCHHHHHHHHHhC-------CCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCc
Confidence 478999999999999999999998864 46799999999999999999999876 468999999986532
Q ss_pred cccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCcc
Q psy17365 249 NVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPL 328 (646)
Q Consensus 249 ~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ 328 (646)
. ....||+|+++.+|.. ++..+.++|||||+||+++|+..+.
T Consensus 147 ~----------~~~~fD~i~~~~~~~~----------------------------~~~~~~~~LkpgG~lv~~~~~~~~~ 188 (226)
T 1i1n_A 147 A----------EEAPYDAIHVGAAAPV----------------------------VPQALIDQLKPGGRLILPVGPAGGN 188 (226)
T ss_dssp G----------GGCCEEEEEECSBBSS----------------------------CCHHHHHTEEEEEEEEEEESCTTSC
T ss_pred c----------cCCCcCEEEECCchHH----------------------------HHHHHHHhcCCCcEEEEEEecCCCc
Confidence 1 1246999999998721 2456789999999999999998777
Q ss_pred ccHHH
Q psy17365 329 EDEAV 333 (646)
Q Consensus 329 ENE~V 333 (646)
++..+
T Consensus 189 ~~~~~ 193 (226)
T 1i1n_A 189 QMLEQ 193 (226)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 77443
No 29
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.41 E-value=2e-12 Score=128.06 Aligned_cols=149 Identities=14% Similarity=0.123 Sum_probs=102.5
Q ss_pred CCCCCeEEEEcCC-CchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccccc
Q psy17365 175 VQTHHKVLDMCAA-PGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYT 253 (646)
Q Consensus 175 ~~pg~~VLDmCAa-PGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~ 253 (646)
++++.+|||+||| +|..+..++... .+.|+|+|+++..++.+++|+++++. ++.++++|+..+....
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~---------~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~-- 120 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF---------NCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGIIKGVV-- 120 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH---------CCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSSTTTC--
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc---------CCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhhhhcc--
Confidence 4689999999999 999999998873 46899999999999999999999998 8999999976443211
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHH
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAV 333 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~V 333 (646)
...||.|++|+|+...+.-...... ..|... ...+ .....++..+.++|||||++++.+++- + +....
T Consensus 121 -------~~~fD~I~~npp~~~~~~~~~~~~~-~~~~~~-~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~-~-~~~~~ 188 (230)
T 3evz_A 121 -------EGTFDVIFSAPPYYDKPLGRVLTER-EAIGGG-KYGE-EFSVKLLEEAFDHLNPGGKVALYLPDK-E-KLLNV 188 (230)
T ss_dssp -------CSCEEEEEECCCCC----------------CC-SSSC-HHHHHHHHHHGGGEEEEEEEEEEEESC-H-HHHHH
T ss_pred -------cCceeEEEECCCCcCCccccccChh-hhhccC-ccch-HHHHHHHHHHHHHhCCCeEEEEEeccc-H-hHHHH
Confidence 2579999999998776642211111 111110 0111 233689999999999999999865432 2 44556
Q ss_pred HHHHHHHccCcEEE
Q psy17365 334 IQRLIVETQGAVQL 347 (646)
Q Consensus 334 V~~~L~~~~~~~el 347 (646)
+.+.+++++-.++.
T Consensus 189 ~~~~l~~~g~~~~~ 202 (230)
T 3evz_A 189 IKERGIKLGYSVKD 202 (230)
T ss_dssp HHHHHHHTTCEEEE
T ss_pred HHHHHHHcCCceEE
Confidence 66777777643333
No 30
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.39 E-value=2.1e-12 Score=127.02 Aligned_cols=125 Identities=16% Similarity=0.114 Sum_probs=103.0
Q ss_pred cccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEecCCCCC
Q psy17365 169 PPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CAIITNHDASVM 247 (646)
Q Consensus 169 ~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni~v~~~Da~~~ 247 (646)
....+++.++.+|||+|||+|..+.++|.. .+.|+|+|+++.+++.++++++++|++ ++.++.+|+...
T Consensus 47 ~l~~l~~~~~~~vLDlGcG~G~~~~~la~~----------~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 116 (204)
T 3njr_A 47 TLAALAPRRGELLWDIGGGSGSVSVEWCLA----------GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA 116 (204)
T ss_dssp HHHHHCCCTTCEEEEETCTTCHHHHHHHHT----------TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG
T ss_pred HHHhcCCCCCCEEEEecCCCCHHHHHHHHc----------CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh
Confidence 344567889999999999999999998875 368999999999999999999999998 899999998763
Q ss_pred ccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCc
Q psy17365 248 PNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNP 327 (646)
Q Consensus 248 p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p 327 (646)
.. ....||.|+++.. . + +. ++..+.++|||||+|++++|+.
T Consensus 117 ~~----------~~~~~D~v~~~~~-----~-----~----------------~~-~l~~~~~~LkpgG~lv~~~~~~-- 157 (204)
T 3njr_A 117 LA----------DLPLPEAVFIGGG-----G-----S----------------QA-LYDRLWEWLAPGTRIVANAVTL-- 157 (204)
T ss_dssp GT----------TSCCCSEEEECSC-----C-----C----------------HH-HHHHHHHHSCTTCEEEEEECSH--
T ss_pred cc----------cCCCCCEEEECCc-----c-----c----------------HH-HHHHHHHhcCCCcEEEEEecCc--
Confidence 21 1136999998652 0 0 12 7899999999999999998876
Q ss_pred cccHHHHHHHHHHccC
Q psy17365 328 LEDEAVIQRLIVETQG 343 (646)
Q Consensus 328 ~ENE~VV~~~L~~~~~ 343 (646)
++...+.++|++++.
T Consensus 158 -~~~~~~~~~l~~~g~ 172 (204)
T 3njr_A 158 -ESETLLTQLHARHGG 172 (204)
T ss_dssp -HHHHHHHHHHHHHCS
T ss_pred -ccHHHHHHHHHhCCC
Confidence 778888888988873
No 31
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.38 E-value=1.9e-12 Score=125.06 Aligned_cols=138 Identities=15% Similarity=0.204 Sum_probs=101.9
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEecCCCCCccccc
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS-PCAIITNHDASVMPNVLY 252 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~-~ni~v~~~Da~~~p~~~~ 252 (646)
.+++|.+|||+|||+|..+..++..++ +.+.|+|+|+++..++.++++++..|. .++.++++|+..++...
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~-------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~- 90 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVG-------ENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYI- 90 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHC-------TTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTC-
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhC-------CCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhc-
Confidence 467899999999999999999998874 467999999999999999999999998 78999999987765321
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCcc--cc
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPL--ED 330 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~--EN 330 (646)
...||.|++|+|.-..+ + ............++..+.++|||||++++++++-.+. +.
T Consensus 91 --------~~~fD~v~~~~~~~~~~------~-------~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~ 149 (197)
T 3eey_A 91 --------DCPVKAVMFNLGYLPSG------D-------HSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEE 149 (197)
T ss_dssp --------CSCEEEEEEEESBCTTS------C-------TTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHH
T ss_pred --------cCCceEEEEcCCcccCc------c-------cccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHH
Confidence 25799999998751111 0 0011112244568999999999999999887553322 22
Q ss_pred HHHHHHHHHH
Q psy17365 331 EAVIQRLIVE 340 (646)
Q Consensus 331 E~VV~~~L~~ 340 (646)
...+..++..
T Consensus 150 ~~~~~~~~~~ 159 (197)
T 3eey_A 150 KEKVLEFLKG 159 (197)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHh
Confidence 3344455544
No 32
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.38 E-value=2.2e-12 Score=123.41 Aligned_cols=142 Identities=13% Similarity=0.123 Sum_probs=97.8
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
+++|.+|||+|||+|..|..++.. .+.|+|+|+|+..++.++++++..|..++.+++.|+..++...
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~----------~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~--- 86 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL----------SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYV--- 86 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT----------SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTC---
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh----------CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhc---
Confidence 568999999999999999998864 4689999999999999999999999989999887776543211
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCc---cccH
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNP---LEDE 331 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p---~ENE 331 (646)
...||.|+++.++-..+ ..........+..+|..+.++|||||+++.+.++-++ .|.+
T Consensus 87 ------~~~fD~v~~~~~~~~~~-------------~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~ 147 (185)
T 3mti_A 87 ------REPIRAAIFNLGYLPSA-------------DKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKD 147 (185)
T ss_dssp ------CSCEEEEEEEEC------------------------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHH
T ss_pred ------cCCcCEEEEeCCCCCCc-------------chhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHH
Confidence 25799999885421111 1112223345667899999999999999988776443 2334
Q ss_pred HHHHHHHHHcc-CcEEEee
Q psy17365 332 AVIQRLIVETQ-GAVQLVD 349 (646)
Q Consensus 332 ~VV~~~L~~~~-~~~elv~ 349 (646)
. +..++...+ ..+++..
T Consensus 148 ~-~~~~~~~l~~~~~~~~~ 165 (185)
T 3mti_A 148 A-VLEYVIGLDQRVFTAML 165 (185)
T ss_dssp H-HHHHHHHSCTTTEEEEE
T ss_pred H-HHHHHHhCCCceEEEEE
Confidence 3 444555443 2355544
No 33
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.36 E-value=9.1e-13 Score=128.71 Aligned_cols=138 Identities=14% Similarity=0.098 Sum_probs=95.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccccc-
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYT- 253 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~- 253 (646)
+++|.+|||+|||||++|..+++. .+.|+|+|+++.. ..+++.++++|+...+.....
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~----------~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~~~~~~~~~ 81 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL----------ARKIISIDLQEME-----------EIAGVRFIRCDIFKETIFDDID 81 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT----------CSEEEEEESSCCC-----------CCTTCEEEECCTTSSSHHHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc----------CCcEEEEeccccc-----------cCCCeEEEEccccCHHHHHHHH
Confidence 468999999999999999988764 5799999999752 356899999998775321000
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHH
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAV 333 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~V 333 (646)
..-+......||+|++|+++...|.. . .+......++..+|..|.++|||||++| |.+...++...
T Consensus 82 ~~~~~~~~~~~D~Vlsd~~~~~~g~~----------~-~d~~~~~~l~~~~l~~a~~~LkpGG~lv---~k~~~~~~~~~ 147 (191)
T 3dou_A 82 RALREEGIEKVDDVVSDAMAKVSGIP----------S-RDHAVSYQIGQRVMEIAVRYLRNGGNVL---LKQFQGDMTND 147 (191)
T ss_dssp HHHHHHTCSSEEEEEECCCCCCCSCH----------H-HHHHHHHHHHHHHHHHHHHHEEEEEEEE---EEEECSTHHHH
T ss_pred HHhhcccCCcceEEecCCCcCCCCCc----------c-cCHHHHHHHHHHHHHHHHHHccCCCEEE---EEEcCCCCHHH
Confidence 00000000379999999988777641 1 1223345677899999999999999999 44455566666
Q ss_pred HHHHHHHccCcEEEeec
Q psy17365 334 IQRLIVETQGAVQLVDV 350 (646)
Q Consensus 334 V~~~L~~~~~~~elv~~ 350 (646)
+.+.|+.+ |.-|.+
T Consensus 148 ~~~~l~~~---F~~v~~ 161 (191)
T 3dou_A 148 FIAIWRKN---FSSYKI 161 (191)
T ss_dssp HHHHHGGG---EEEEEE
T ss_pred HHHHHHHh---cCEEEE
Confidence 77777654 444443
No 34
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.35 E-value=4e-12 Score=136.54 Aligned_cols=145 Identities=14% Similarity=0.142 Sum_probs=109.0
Q ss_pred ccccEEEecccccccccc-cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcC
Q psy17365 155 ATGHISRQEAVSMIPPLL-LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLN 233 (646)
Q Consensus 155 ~~G~i~~Qd~~Sml~~~~-Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg 233 (646)
..|+.+.|+.++.+.... ....+|.+|||+| |+|..+..++.. + +.+.|+++|+|+..++.+++|++++|
T Consensus 149 ~~~~~~~~~~~~~~l~~~~~~~~~~~~VLDlG-G~G~~~~~la~~-~-------~~~~v~~vDi~~~~l~~a~~~~~~~g 219 (373)
T 2qm3_A 149 DQAYVTPETTVARVILMHTRGDLENKDIFVLG-DDDLTSIALMLS-G-------LPKRIAVLDIDERLTKFIEKAANEIG 219 (373)
T ss_dssp TCCCBCHHHHHHHHHHHHHTTCSTTCEEEEES-CTTCHHHHHHHH-T-------CCSEEEEECSCHHHHHHHHHHHHHHT
T ss_pred CCeecCHHHHHHHHHHHhhcCCCCCCEEEEEC-CCCHHHHHHHHh-C-------CCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 455566666666554332 2334789999999 999999988765 2 35799999999999999999999999
Q ss_pred CCCeEEEecCCCC-CccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhh
Q psy17365 234 SPCAIITNHDASV-MPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEML 312 (646)
Q Consensus 234 ~~ni~v~~~Da~~-~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lL 312 (646)
+.++.++.+|+.. ++.. ....||.|++|+||+..| ...+|.++.++|
T Consensus 220 ~~~v~~~~~D~~~~l~~~---------~~~~fD~Vi~~~p~~~~~-----------------------~~~~l~~~~~~L 267 (373)
T 2qm3_A 220 YEDIEIFTFDLRKPLPDY---------ALHKFDTFITDPPETLEA-----------------------IRAFVGRGIATL 267 (373)
T ss_dssp CCCEEEECCCTTSCCCTT---------TSSCBSEEEECCCSSHHH-----------------------HHHHHHHHHHTB
T ss_pred CCCEEEEEChhhhhchhh---------ccCCccEEEECCCCchHH-----------------------HHHHHHHHHHHc
Confidence 8889999999987 4321 024799999999976421 157899999999
Q ss_pred ccCCe-EEEEcCCCCccccH---HHHHHHHH-Hcc
Q psy17365 313 AVGGK-IAYSTCSLNPLEDE---AVIQRLIV-ETQ 342 (646)
Q Consensus 313 KpGG~-LVYSTCSl~p~ENE---~VV~~~L~-~~~ 342 (646)
||||+ ++|++|+ ..++. ..+..++. +.+
T Consensus 268 kpgG~~~~~~~~~--~~~~~~~~~~~~~~l~~~~g 300 (373)
T 2qm3_A 268 KGPRCAGYFGITR--RESSLDKWREIQKLLLNEFN 300 (373)
T ss_dssp CSTTCEEEEEECT--TTCCHHHHHHHHHHHHHTSC
T ss_pred ccCCeEEEEEEec--CcCCHHHHHHHHHHHHHhcC
Confidence 99995 5899887 23343 56677776 554
No 35
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.35 E-value=2e-12 Score=122.24 Aligned_cols=147 Identities=17% Similarity=0.249 Sum_probs=108.6
Q ss_pred cccEEEecccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q psy17365 156 TGHISRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP 235 (646)
Q Consensus 156 ~G~i~~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ 235 (646)
.|.++.++....+ ...+.+.++.+|||+|||+|..+.+++... +.+.|+++|+++..++.++++++..+.+
T Consensus 5 ~g~~t~~~~~~~~-~~~~~~~~~~~vldiG~G~G~~~~~l~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~~~~ 75 (178)
T 3hm2_A 5 DGQLTKQHVRALA-ISALAPKPHETLWDIGGGSGSIAIEWLRST--------PQTTAVCFEISEERRERILSNAINLGVS 75 (178)
T ss_dssp -CCSHHHHHHHHH-HHHHCCCTTEEEEEESTTTTHHHHHHHTTS--------SSEEEEEECSCHHHHHHHHHHHHTTTCT
T ss_pred CCcccHHHHHHHH-HHHhcccCCCeEEEeCCCCCHHHHHHHHHC--------CCCeEEEEeCCHHHHHHHHHHHHHhCCC
Confidence 4545444444433 234578899999999999999999988764 4689999999999999999999999988
Q ss_pred -CeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhcc
Q psy17365 236 -CAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAV 314 (646)
Q Consensus 236 -ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKp 314 (646)
++ ++..|+..... .....||.|+++.+... ..++..+.++|||
T Consensus 76 ~~~-~~~~d~~~~~~---------~~~~~~D~i~~~~~~~~--------------------------~~~l~~~~~~L~~ 119 (178)
T 3hm2_A 76 DRI-AVQQGAPRAFD---------DVPDNPDVIFIGGGLTA--------------------------PGVFAAAWKRLPV 119 (178)
T ss_dssp TSE-EEECCTTGGGG---------GCCSCCSEEEECC-TTC--------------------------TTHHHHHHHTCCT
T ss_pred CCE-EEecchHhhhh---------ccCCCCCEEEECCcccH--------------------------HHHHHHHHHhcCC
Confidence 78 78888743211 00147999998654211 2578999999999
Q ss_pred CCeEEEEcCCCCccccHHHHHHHHHHccCcEEEeec
Q psy17365 315 GGKIAYSTCSLNPLEDEAVIQRLIVETQGAVQLVDV 350 (646)
Q Consensus 315 GG~LVYSTCSl~p~ENE~VV~~~L~~~~~~~elv~~ 350 (646)
||++++++++. ++...+..++++++..+.-+.+
T Consensus 120 gG~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 152 (178)
T 3hm2_A 120 GGRLVANAVTV---ESEQMLWALRKQFGGTISSFAI 152 (178)
T ss_dssp TCEEEEEECSH---HHHHHHHHHHHHHCCEEEEEEE
T ss_pred CCEEEEEeecc---ccHHHHHHHHHHcCCeeEEEEe
Confidence 99999988776 6677788888888754444333
No 36
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.34 E-value=1.1e-12 Score=132.80 Aligned_cols=122 Identities=11% Similarity=0.114 Sum_probs=95.7
Q ss_pred ccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEecCC
Q psy17365 166 SMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CAIITNHDA 244 (646)
Q Consensus 166 Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni~v~~~Da 244 (646)
+.+...++...++.+|||+|||+|..|..+|+.+. +.+.|+++|+++.+++.+++++++.|.. ++.+..+|+
T Consensus 52 ~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~-------~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~ 124 (248)
T 3tfw_A 52 GQFLALLVRLTQAKRILEIGTLGGYSTIWMARELP-------ADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPA 124 (248)
T ss_dssp HHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSC-------TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred HHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCC-------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 33444445567889999999999999999998753 3789999999999999999999999987 799999998
Q ss_pred CCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 245 SVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 245 ~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
..+.... .....||.|++|+++.. ....+..+.++|||||+||+..+.
T Consensus 125 ~~~l~~~-------~~~~~fD~V~~d~~~~~-------------------------~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 125 LQSLESL-------GECPAFDLIFIDADKPN-------------------------NPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp HHHHHTC-------CSCCCCSEEEECSCGGG-------------------------HHHHHHHHHHTCCTTCEEEEECCS
T ss_pred HHHHHhc-------CCCCCeEEEEECCchHH-------------------------HHHHHHHHHHhcCCCeEEEEeCCC
Confidence 7632111 01247999999986322 124688999999999999998887
Q ss_pred CC
Q psy17365 325 LN 326 (646)
Q Consensus 325 l~ 326 (646)
..
T Consensus 173 ~~ 174 (248)
T 3tfw_A 173 RD 174 (248)
T ss_dssp GG
T ss_pred cC
Confidence 65
No 37
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.34 E-value=1.3e-12 Score=129.31 Aligned_cols=145 Identities=10% Similarity=0.057 Sum_probs=103.5
Q ss_pred ccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEecCCCC
Q psy17365 168 IPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CAIITNHDASV 246 (646)
Q Consensus 168 l~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni~v~~~Da~~ 246 (646)
+...++...++.+|||+|||+|..|..+|+.+. +.+.|+++|+++..++.+++++++.|.. ++.++.+|+..
T Consensus 49 ~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~-------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 121 (221)
T 3u81_A 49 IMDAVIREYSPSLVLELGAYCGYSAVRMARLLQ-------PGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQD 121 (221)
T ss_dssp HHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSC-------TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred HHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCC-------CCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHH
Confidence 334445556788999999999999999998653 4689999999999999999999999986 59999999865
Q ss_pred CccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCC
Q psy17365 247 MPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLN 326 (646)
Q Consensus 247 ~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~ 326 (646)
+.... ........||.|++|+++.. .....+++..+ ++|||||+||+++|...
T Consensus 122 ~l~~~----~~~~~~~~fD~V~~d~~~~~----------------------~~~~~~~~~~~-~~LkpgG~lv~~~~~~~ 174 (221)
T 3u81_A 122 LIPQL----KKKYDVDTLDMVFLDHWKDR----------------------YLPDTLLLEKC-GLLRKGTVLLADNVIVP 174 (221)
T ss_dssp HGGGT----TTTSCCCCCSEEEECSCGGG----------------------HHHHHHHHHHT-TCCCTTCEEEESCCCCC
T ss_pred HHHHH----HHhcCCCceEEEEEcCCccc----------------------chHHHHHHHhc-cccCCCeEEEEeCCCCc
Confidence 32111 00001247999999975321 11123456666 99999999999988853
Q ss_pred ccccHHHHHHHHHHccCcEEEeec
Q psy17365 327 PLEDEAVIQRLIVETQGAVQLVDV 350 (646)
Q Consensus 327 p~ENE~VV~~~L~~~~~~~elv~~ 350 (646)
+...+.+.+++++. ++...+
T Consensus 175 ---~~~~~~~~l~~~~~-~~~~~~ 194 (221)
T 3u81_A 175 ---GTPDFLAYVRGSSS-FECTHY 194 (221)
T ss_dssp ---CCHHHHHHHHHCTT-EEEEEE
T ss_pred ---chHHHHHHHhhCCC-ceEEEc
Confidence 22345566777653 555443
No 38
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.33 E-value=1e-12 Score=130.91 Aligned_cols=131 Identities=17% Similarity=0.109 Sum_probs=106.3
Q ss_pred ccccEEEecccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q psy17365 155 ATGHISRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS 234 (646)
Q Consensus 155 ~~G~i~~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~ 234 (646)
..|....|...+.+...++.+.++.+|||+|||+|..+..+++.+ +.+.|+++|+++.+++.+++++++.|.
T Consensus 32 ~~~~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~~~ 103 (233)
T 2gpy_A 32 EQQVPIMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQAL--------PEATIVSIERDERRYEEAHKHVKALGL 103 (233)
T ss_dssp HTTCCCCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHC--------TTCEEEEECCCHHHHHHHHHHHHHTTC
T ss_pred HcCCCCcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHC--------CCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 346666787777777777888899999999999999999999875 467999999999999999999999998
Q ss_pred C-CeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhc
Q psy17365 235 P-CAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLA 313 (646)
Q Consensus 235 ~-ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLK 313 (646)
. ++.+..+|+........ ....||.|++|++|+ .+..+|..+.++|+
T Consensus 104 ~~~v~~~~~d~~~~~~~~~-------~~~~fD~I~~~~~~~-------------------------~~~~~l~~~~~~L~ 151 (233)
T 2gpy_A 104 ESRIELLFGDALQLGEKLE-------LYPLFDVLFIDAAKG-------------------------QYRRFFDMYSPMVR 151 (233)
T ss_dssp TTTEEEECSCGGGSHHHHT-------TSCCEEEEEEEGGGS-------------------------CHHHHHHHHGGGEE
T ss_pred CCcEEEEECCHHHHHHhcc-------cCCCccEEEECCCHH-------------------------HHHHHHHHHHHHcC
Confidence 5 59999999876421110 014799999998854 12467899999999
Q ss_pred cCCeEEEEcCCC
Q psy17365 314 VGGKIAYSTCSL 325 (646)
Q Consensus 314 pGG~LVYSTCSl 325 (646)
|||+|+++++.+
T Consensus 152 pgG~lv~~~~~~ 163 (233)
T 2gpy_A 152 PGGLILSDNVLF 163 (233)
T ss_dssp EEEEEEEETTTC
T ss_pred CCeEEEEEcCCc
Confidence 999999997654
No 39
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.32 E-value=5.1e-12 Score=131.00 Aligned_cols=137 Identities=12% Similarity=0.150 Sum_probs=101.7
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC-eEEEecCCCCCccccccC
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC-AIITNHDASVMPNVLYTD 254 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n-i~v~~~Da~~~p~~~~~~ 254 (646)
.++.+|||+|||+|..+..++.. . ...|+|+|+|+..++.+++|++++|+.+ +.++++|+.....
T Consensus 122 ~~~~~vLDlG~GsG~~~~~la~~-~--------~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~----- 187 (284)
T 1nv8_A 122 YGIKTVADIGTGSGAIGVSVAKF-S--------DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK----- 187 (284)
T ss_dssp HTCCEEEEESCTTSHHHHHHHHH-S--------SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG-----
T ss_pred cCCCEEEEEeCchhHHHHHHHHC-C--------CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcc-----
Confidence 46789999999999999999876 3 5799999999999999999999999886 9999999876311
Q ss_pred CCCCCCCCCC---CeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHH-HhhccCCeEEEEcCCCCcccc
Q psy17365 255 ADGNKVPMKF---DRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGV-EMLAVGGKIAYSTCSLNPLED 330 (646)
Q Consensus 255 ~~g~~~~~~F---D~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~-~lLKpGG~LVYSTCSl~p~EN 330 (646)
..| |.|++||||.+.+. .-.+++. |.+........-...++++++ +.|+|||.|++. +...+.
T Consensus 188 -------~~f~~~D~IvsnPPyi~~~~-~l~~~v~--~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e---~~~~q~ 254 (284)
T 1nv8_A 188 -------EKFASIEMILSNPPYVKSSA-HLPKDVL--FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME---IGEDQV 254 (284)
T ss_dssp -------GGTTTCCEEEECCCCBCGGG-SCTTSCC--CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE---CCTTCH
T ss_pred -------cccCCCCEEEEcCCCCCccc-ccChhhc--cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE---ECchHH
Confidence 257 99999999999887 4455553 443322111111226788888 999999999953 445555
Q ss_pred HHHHHHHHHH
Q psy17365 331 EAVIQRLIVE 340 (646)
Q Consensus 331 E~VV~~~L~~ 340 (646)
++|. +++++
T Consensus 255 ~~v~-~~~~~ 263 (284)
T 1nv8_A 255 EELK-KIVSD 263 (284)
T ss_dssp HHHT-TTSTT
T ss_pred HHHH-HHHHh
Confidence 5544 44433
No 40
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.30 E-value=1.4e-11 Score=121.89 Aligned_cols=134 Identities=17% Similarity=0.207 Sum_probs=93.5
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~ 252 (646)
+.+++|.+|||+|||+|..|.++++.+ +.|.|+|+|+|+.+++.+.+.+++. .|+.++.+|+.......
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~--------~~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~~~~~- 121 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIV--------DEGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKPWKYS- 121 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHT--------TTSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCGGGTT-
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHc--------CCCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCchhhc-
Confidence 457899999999999999999999885 3679999999999988777777654 47888888887632100
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHH-HHHHHHHHhhccCCeEEEEc---CCCCcc
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQY-RIVKRGVEMLAVGGKIAYST---CSLNPL 328 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~-~IL~~A~~lLKpGG~LVYST---CSl~p~ 328 (646)
.....||.|++|.+ .|+ |. .+|.++.++|||||+++++. |.-...
T Consensus 122 ------~~~~~fD~V~~~~~---------~~~----------------~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~ 170 (210)
T 1nt2_A 122 ------GIVEKVDLIYQDIA---------QKN----------------QIEILKANAEFFLKEKGEVVIMVKARSIDSTA 170 (210)
T ss_dssp ------TTCCCEEEEEECCC---------STT----------------HHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTS
T ss_pred ------ccccceeEEEEecc---------Chh----------------HHHHHHHHHHHHhCCCCEEEEEEecCCccccC
Confidence 01257999999842 111 22 34889999999999999984 222223
Q ss_pred ccHHHHHHH---HHHccCcEEEeecc
Q psy17365 329 EDEAVIQRL---IVETQGAVQLVDVS 351 (646)
Q Consensus 329 ENE~VV~~~---L~~~~~~~elv~~~ 351 (646)
..+++.... |+++ |++++..
T Consensus 171 ~~~~~~~~~~~~l~~~---f~~~~~~ 193 (210)
T 1nt2_A 171 EPEEVFKSVLKEMEGD---FKIVKHG 193 (210)
T ss_dssp CHHHHHHHHHHHHHTT---SEEEEEE
T ss_pred CHHHHHHHHHHHHHhh---cEEeeee
Confidence 334444222 5543 6666654
No 41
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.29 E-value=4.2e-13 Score=130.12 Aligned_cols=155 Identities=14% Similarity=0.121 Sum_probs=83.6
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCC
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~ 255 (646)
.++.+|||+|||+|..+.+++... +.+.|+++|+++..++.+++++...+. ++.++++|+........
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~--- 96 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALAC--------PGVSVTAVDLSMDALAVARRNAERFGA-VVDWAAADGIEWLIERA--- 96 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHC--------TTEEEEEEECC--------------------CCHHHHHHHHHHHH---
T ss_pred CCCCEEEEecCCHhHHHHHHHHhC--------CCCeEEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchHhhhhhhh---
Confidence 678899999999999999999874 467999999999999999999998887 78888888865211000
Q ss_pred CCCCCCCCCCeeecCCCCCCCcccccCccccccCCcch----hhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccH
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSN----GNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDE 331 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~----~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE 331 (646)
.....||.|++|+|+...+.+...+.....+.+.. ..........++..+.++|||||++++.++.. ...
T Consensus 97 ---~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---~~~ 170 (215)
T 4dzr_A 97 ---ERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH---NQA 170 (215)
T ss_dssp ---HTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT---SCH
T ss_pred ---hccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC---ccH
Confidence 00257999999999988776544333222221111 11122334688999999999999955444543 455
Q ss_pred HHHHHHHH--HccCcEEEeec
Q psy17365 332 AVIQRLIV--ETQGAVQLVDV 350 (646)
Q Consensus 332 ~VV~~~L~--~~~~~~elv~~ 350 (646)
..+..++. +.+ +..+.+
T Consensus 171 ~~~~~~l~~~~~g--f~~~~~ 189 (215)
T 4dzr_A 171 DEVARLFAPWRER--GFRVRK 189 (215)
T ss_dssp HHHHHHTGGGGGG--TEECCE
T ss_pred HHHHHHHHHhhcC--CceEEE
Confidence 56677777 554 444433
No 42
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.28 E-value=6.7e-12 Score=129.11 Aligned_cols=108 Identities=19% Similarity=0.130 Sum_probs=89.8
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~ 252 (646)
..+.+|++|||+|||+|..|..+|... +.+.|+|+|+++..++.+++|++.+++.|+.++++|+..++.
T Consensus 115 ~~~~~~~~VLDlgcG~G~~s~~la~~~--------~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~--- 183 (272)
T 3a27_A 115 FISNENEVVVDMFAGIGYFTIPLAKYS--------KPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL--- 183 (272)
T ss_dssp TSCCTTCEEEETTCTTTTTHHHHHHHT--------CCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC---
T ss_pred HhcCCCCEEEEecCcCCHHHHHHHHhC--------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc---
Confidence 346789999999999999999999874 357999999999999999999999999999999999987621
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCC
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLN 326 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~ 326 (646)
...||+|++|+|. + . .+++..+++.|+|||++++| |...
T Consensus 184 --------~~~~D~Vi~d~p~---~-------~----------------~~~l~~~~~~LkpgG~l~~s-~~~~ 222 (272)
T 3a27_A 184 --------KDVADRVIMGYVH---K-------T----------------HKFLDKTFEFLKDRGVIHYH-ETVA 222 (272)
T ss_dssp --------TTCEEEEEECCCS---S-------G----------------GGGHHHHHHHEEEEEEEEEE-EEEE
T ss_pred --------cCCceEEEECCcc---c-------H----------------HHHHHHHHHHcCCCCEEEEE-EcCc
Confidence 2479999999984 1 0 14688899999999988755 5544
No 43
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.27 E-value=1.8e-11 Score=117.87 Aligned_cols=112 Identities=16% Similarity=0.113 Sum_probs=89.9
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCC
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~ 255 (646)
.++.+|||+|||+|..+..++.. +.+.|+|+|+|+..++.+++|+++.+..++.++++|+..++...
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~---------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~---- 109 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR---------GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAG---- 109 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT---------TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHC----
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC---------CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhc----
Confidence 47889999999999999987763 46689999999999999999999999989999999997754211
Q ss_pred CCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHH--hhccCCeEEEEcCCC
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVE--MLAVGGKIAYSTCSL 325 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~--lLKpGG~LVYSTCSl 325 (646)
....||.|++|+|.... ......++..+.+ +|+|||+++..+.+-
T Consensus 110 ----~~~~fD~i~~~~p~~~~---------------------~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 110 ----TTSPVDLVLADPPYNVD---------------------SADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp ----CSSCCSEEEECCCTTSC---------------------HHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred ----cCCCccEEEECCCCCcc---------------------hhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 02579999999994331 0223467888888 999999999877654
No 44
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.27 E-value=6.3e-11 Score=116.46 Aligned_cols=141 Identities=11% Similarity=0.046 Sum_probs=100.9
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCC
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~ 255 (646)
.++.+|||+|||+|..+..+|... +.+.|+|+|+++..+..+++++++.|+.|+.++++|+..++...
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~--------p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~---- 107 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQN--------PDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYF---- 107 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHC--------TTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTS----
T ss_pred CCCCeEEEEccCcCHHHHHHHHHC--------CCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhc----
Confidence 467899999999999999999874 46799999999999999999999999999999999998755321
Q ss_pred CCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHHHH
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAVIQ 335 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~VV~ 335 (646)
....||.|+++.|. |....+.... . ..+..+|..+.++|||||.|+++|-. ...-.-+.
T Consensus 108 ----~~~~~D~i~~~~~~---------~~~~~~~~~~---~--~~~~~~l~~~~~~LkpgG~l~~~~~~---~~~~~~~~ 166 (214)
T 1yzh_A 108 ----EDGEIDRLYLNFSD---------PWPKKRHEKR---R--LTYKTFLDTFKRILPENGEIHFKTDN---RGLFEYSL 166 (214)
T ss_dssp ----CTTCCSEEEEESCC---------CCCSGGGGGG---S--TTSHHHHHHHHHHSCTTCEEEEEESC---HHHHHHHH
T ss_pred ----CCCCCCEEEEECCC---------Cccccchhhh---c--cCCHHHHHHHHHHcCCCcEEEEEeCC---HHHHHHHH
Confidence 12469999998662 2110000000 0 12567899999999999999987532 11223344
Q ss_pred HHHHHccCcEEEeecc
Q psy17365 336 RLIVETQGAVQLVDVS 351 (646)
Q Consensus 336 ~~L~~~~~~~elv~~~ 351 (646)
+.+.+++ ++++.+.
T Consensus 167 ~~~~~~g--~~~~~~~ 180 (214)
T 1yzh_A 167 VSFSQYG--MKLNGVW 180 (214)
T ss_dssp HHHHHHT--CEEEEEE
T ss_pred HHHHHCC--Ceeeecc
Confidence 4566664 5555543
No 45
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.27 E-value=3.4e-11 Score=117.18 Aligned_cols=125 Identities=17% Similarity=0.149 Sum_probs=96.2
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccccc
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYT 253 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~ 253 (646)
.+.++.+|||+|||+|..+..++.. +.+.|+|+|+++..++.+++|++..+. ++.++++|+..++
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~---------~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~----- 110 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLL---------GAKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEFN----- 110 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHT---------TCSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGCC-----
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHc---------CCCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHcC-----
Confidence 4567899999999999999988764 245899999999999999999998888 8999999987753
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHH
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAV 333 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~V 333 (646)
..||.|++|+|+.... +. ....+|..+.+++ || +|++|. .+.++.+.
T Consensus 111 --------~~~D~v~~~~p~~~~~---~~-----------------~~~~~l~~~~~~l--~~--~~~~~~-~~~~~~~~ 157 (207)
T 1wy7_A 111 --------SRVDIVIMNPPFGSQR---KH-----------------ADRPFLLKAFEIS--DV--VYSIHL-AKPEVRRF 157 (207)
T ss_dssp --------CCCSEEEECCCCSSSS---TT-----------------TTHHHHHHHHHHC--SE--EEEEEE-CCHHHHHH
T ss_pred --------CCCCEEEEcCCCcccc---CC-----------------chHHHHHHHHHhc--Cc--EEEEEe-CCcCCHHH
Confidence 3699999999964321 10 1135688888887 43 677783 34567778
Q ss_pred HHHHHHHccCcEE
Q psy17365 334 IQRLIVETQGAVQ 346 (646)
Q Consensus 334 V~~~L~~~~~~~e 346 (646)
+.+++.+++..++
T Consensus 158 ~~~~l~~~g~~~~ 170 (207)
T 1wy7_A 158 IEKFSWEHGFVVT 170 (207)
T ss_dssp HHHHHHHTTEEEE
T ss_pred HHHHHHHCCCeEE
Confidence 8888888763333
No 46
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.27 E-value=3.9e-12 Score=125.47 Aligned_cols=122 Identities=14% Similarity=0.112 Sum_probs=93.6
Q ss_pred ccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC-eEEEecCCCC
Q psy17365 168 IPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC-AIITNHDASV 246 (646)
Q Consensus 168 l~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n-i~v~~~Da~~ 246 (646)
+...++...++.+|||+|||+|..|.++|+.+. +.+.|+++|+++..++.+++++++.|..+ +.++.+|+..
T Consensus 49 ~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~-------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 121 (223)
T 3duw_A 49 FLQLLVQIQGARNILEIGTLGGYSTIWLARGLS-------SGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALD 121 (223)
T ss_dssp HHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCC-------SSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred HHHHHHHhhCCCEEEEecCCccHHHHHHHHhCC-------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 333444566788999999999999999998752 36899999999999999999999999875 9999999865
Q ss_pred CccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCC
Q psy17365 247 MPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLN 326 (646)
Q Consensus 247 ~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~ 326 (646)
...... + .....||.|++|++++. ...++..+.++|+|||+|+...+...
T Consensus 122 ~~~~~~---~--~~~~~fD~v~~d~~~~~-------------------------~~~~l~~~~~~L~pgG~lv~~~~~~~ 171 (223)
T 3duw_A 122 SLQQIE---N--EKYEPFDFIFIDADKQN-------------------------NPAYFEWALKLSRPGTVIIGDNVVRE 171 (223)
T ss_dssp HHHHHH---H--TTCCCCSEEEECSCGGG-------------------------HHHHHHHHHHTCCTTCEEEEESCSGG
T ss_pred HHHHHH---h--cCCCCcCEEEEcCCcHH-------------------------HHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 321110 0 00146999999987331 13678899999999999998766543
No 47
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.27 E-value=6.8e-12 Score=128.07 Aligned_cols=143 Identities=12% Similarity=0.170 Sum_probs=96.4
Q ss_pred ccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHH---cCCC-CeEE
Q psy17365 164 AVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKR---LNSP-CAII 239 (646)
Q Consensus 164 ~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~r---lg~~-ni~v 239 (646)
..+++.+.++.+.++.+|||+|||+|..+..++... +...|+|+|+++..++.+++|++. .+.. ++.+
T Consensus 23 ~D~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~--------~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~ 94 (260)
T 2ozv_A 23 MDAMLLASLVADDRACRIADLGAGAGAAGMAVAARL--------EKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEV 94 (260)
T ss_dssp CHHHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHC--------TTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEE
T ss_pred cHHHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhC--------CCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEE
Confidence 345566667778889999999999999999999874 467999999999999999999988 7776 5899
Q ss_pred EecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEE
Q psy17365 240 TNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIA 319 (646)
Q Consensus 240 ~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LV 319 (646)
+++|+..+...... .......||.|++|||+...+ -..+++...... ..........++..+.++|||||+++
T Consensus 95 ~~~D~~~~~~~~~~---~~~~~~~fD~Vv~nPPy~~~~-~~~~~~~~~~~a---~~~~~~~~~~~l~~~~~~LkpgG~l~ 167 (260)
T 2ozv_A 95 LEADVTLRAKARVE---AGLPDEHFHHVIMNPPYNDAG-DRRTPDALKAEA---HAMTEGLFEDWIRTASAIMVSGGQLS 167 (260)
T ss_dssp EECCTTCCHHHHHH---TTCCTTCEEEEEECCCC-------------------------CCHHHHHHHHHHHEEEEEEEE
T ss_pred EeCCHHHHhhhhhh---hccCCCCcCEEEECCCCcCCC-CCCCcCHHHHHH---hhcCcCCHHHHHHHHHHHcCCCCEEE
Confidence 99999876210000 000125799999999998764 233444321100 00011124578999999999999998
Q ss_pred EE
Q psy17365 320 YS 321 (646)
Q Consensus 320 YS 321 (646)
..
T Consensus 168 ~~ 169 (260)
T 2ozv_A 168 LI 169 (260)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 48
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.26 E-value=2.5e-11 Score=124.37 Aligned_cols=132 Identities=19% Similarity=0.219 Sum_probs=102.9
Q ss_pred ccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEecCCCCCc
Q psy17365 170 PLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS-PCAIITNHDASVMP 248 (646)
Q Consensus 170 ~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~-~ni~v~~~Da~~~p 248 (646)
...+++.++.+|||+|||+|..+..++..++ +.+.|+++|+++.+++.+++|+++.++ .++.+.+.|+....
T Consensus 105 ~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~-------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 177 (277)
T 1o54_A 105 AMMLDVKEGDRIIDTGVGSGAMCAVLARAVG-------SSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGF 177 (277)
T ss_dssp HHHTTCCTTCEEEEECCTTSHHHHHHHHHTT-------TTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCC
T ss_pred HHHhCCCCCCEEEEECCcCCHHHHHHHHHhC-------CCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcc
Confidence 3456889999999999999999999998864 578999999999999999999999987 67899999986541
Q ss_pred cccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCcc
Q psy17365 249 NVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPL 328 (646)
Q Consensus 249 ~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ 328 (646)
....||.|++|+|+. ..+|..+.++|+|||+|++.+++..
T Consensus 178 -----------~~~~~D~V~~~~~~~---------------------------~~~l~~~~~~L~pgG~l~~~~~~~~-- 217 (277)
T 1o54_A 178 -----------DEKDVDALFLDVPDP---------------------------WNYIDKCWEALKGGGRFATVCPTTN-- 217 (277)
T ss_dssp -----------SCCSEEEEEECCSCG---------------------------GGTHHHHHHHEEEEEEEEEEESSHH--
T ss_pred -----------cCCccCEEEECCcCH---------------------------HHHHHHHHHHcCCCCEEEEEeCCHH--
Confidence 014699999998732 1468889999999999998877652
Q ss_pred ccHHHHHHHHHHccCcEEEeecc
Q psy17365 329 EDEAVIQRLIVETQGAVQLVDVS 351 (646)
Q Consensus 329 ENE~VV~~~L~~~~~~~elv~~~ 351 (646)
...-+...|++.+ |..+.+.
T Consensus 218 -~~~~~~~~l~~~g--f~~~~~~ 237 (277)
T 1o54_A 218 -QVQETLKKLQELP--FIRIEVW 237 (277)
T ss_dssp -HHHHHHHHHHHSS--EEEEEEE
T ss_pred -HHHHHHHHHHHCC--CceeEEE
Confidence 2333445566643 5555543
No 49
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.26 E-value=2.2e-11 Score=122.56 Aligned_cols=127 Identities=16% Similarity=0.166 Sum_probs=101.0
Q ss_pred ccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC-eEEEecCCCC
Q psy17365 168 IPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC-AIITNHDASV 246 (646)
Q Consensus 168 l~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n-i~v~~~Da~~ 246 (646)
.....+++.+|.+|||+|||+|..+.+++..++ +.+.|+++|+++.+++.++++++..|.++ +.+.++|+..
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~-------~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 156 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANIVG-------PEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE 156 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHC-------TTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHHhC-------CCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhh
Confidence 344567889999999999999999999999874 57899999999999999999999999887 9999999875
Q ss_pred CccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCC
Q psy17365 247 MPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLN 326 (646)
Q Consensus 247 ~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~ 326 (646)
.. ....||.|++|+|+. ..++.++.++|+|||+++.++-+.
T Consensus 157 ~~-----------~~~~~D~v~~~~~~~---------------------------~~~l~~~~~~L~~gG~l~~~~~~~- 197 (255)
T 3mb5_A 157 GI-----------EEENVDHVILDLPQP---------------------------ERVVEHAAKALKPGGFFVAYTPCS- 197 (255)
T ss_dssp CC-----------CCCSEEEEEECSSCG---------------------------GGGHHHHHHHEEEEEEEEEEESSH-
T ss_pred cc-----------CCCCcCEEEECCCCH---------------------------HHHHHHHHHHcCCCCEEEEEECCH-
Confidence 31 124699999998722 146889999999999998654222
Q ss_pred ccccHHHHHHHHHHcc
Q psy17365 327 PLEDEAVIQRLIVETQ 342 (646)
Q Consensus 327 p~ENE~VV~~~L~~~~ 342 (646)
+....+...|++++
T Consensus 198 --~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 198 --NQVMRLHEKLREFK 211 (255)
T ss_dssp --HHHHHHHHHHHHTG
T ss_pred --HHHHHHHHHHHHcC
Confidence 34445566677664
No 50
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.25 E-value=1.1e-11 Score=131.35 Aligned_cols=150 Identities=12% Similarity=0.138 Sum_probs=108.3
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccccc
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYT 253 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~ 253 (646)
++.++.+|||+|||+|+.+..+++.+....+ ....|+|+|+++..++.++.|+...|. ++.+.++|+....
T Consensus 127 ~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~---~~~~v~GiDi~~~~~~~a~~n~~~~g~-~~~i~~~D~l~~~----- 197 (344)
T 2f8l_A 127 QKKKNVSILDPACGTANLLTTVINQLELKGD---VDVHASGVDVDDLLISLALVGADLQRQ-KMTLLHQDGLANL----- 197 (344)
T ss_dssp TTCSEEEEEETTCTTSHHHHHHHHHHHTTSS---CEEEEEEEESCHHHHHHHHHHHHHHTC-CCEEEESCTTSCC-----
T ss_pred CCCCCCEEEeCCCCccHHHHHHHHHHHHhcC---CCceEEEEECCHHHHHHHHHHHHhCCC-CceEEECCCCCcc-----
Confidence 5667889999999999999999988741100 127899999999999999999998887 6888999975421
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcC-CCCccccHH
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTC-SLNPLEDEA 332 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTC-Sl~p~ENE~ 332 (646)
....||.|+++||++ .+. ..+.+.+|.+.........+..++.+++++|||||++++.++ ++...+.+.
T Consensus 198 ------~~~~fD~Ii~NPPfg---~~~-~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~ 267 (344)
T 2f8l_A 198 ------LVDPVDVVISDLPVG---YYP-DDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFA 267 (344)
T ss_dssp ------CCCCEEEEEEECCCS---EES-CHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHH
T ss_pred ------ccCCccEEEECCCCC---CcC-chhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHH
Confidence 125799999999973 222 222233444332233445677899999999999999998863 344445566
Q ss_pred HHHHHHHHcc
Q psy17365 333 VIQRLIVETQ 342 (646)
Q Consensus 333 VV~~~L~~~~ 342 (646)
.+.+.|.+.+
T Consensus 268 ~ir~~l~~~~ 277 (344)
T 2f8l_A 268 KVDKFIKKNG 277 (344)
T ss_dssp HHHHHHHHHE
T ss_pred HHHHHHHhCC
Confidence 6666666654
No 51
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.24 E-value=1.5e-11 Score=122.80 Aligned_cols=92 Identities=18% Similarity=0.122 Sum_probs=76.5
Q ss_pred ccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEecCCCC
Q psy17365 168 IPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS-PCAIITNHDASV 246 (646)
Q Consensus 168 l~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~-~ni~v~~~Da~~ 246 (646)
+...+....++.+|||+|||+|..+..++.. .+.|+|+|+++..++.+++++++.|+ .++.++++|+..
T Consensus 69 l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~----------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 138 (241)
T 3gdh_A 69 IAGRVSQSFKCDVVVDAFCGVGGNTIQFALT----------GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLL 138 (241)
T ss_dssp HHHHHHHHSCCSEEEETTCTTSHHHHHHHHT----------TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred HHHHhhhccCCCEEEECccccCHHHHHHHHc----------CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHH
Confidence 3333444558899999999999999999864 36899999999999999999999998 689999999977
Q ss_pred CccccccCCCCCCCCCCCCeeecCCCCCCCcccc
Q psy17365 247 MPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMR 280 (646)
Q Consensus 247 ~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lr 280 (646)
++. ...||.|++|+||++.+...
T Consensus 139 ~~~-----------~~~~D~v~~~~~~~~~~~~~ 161 (241)
T 3gdh_A 139 LAS-----------FLKADVVFLSPPWGGPDYAT 161 (241)
T ss_dssp HGG-----------GCCCSEEEECCCCSSGGGGG
T ss_pred hcc-----------cCCCCEEEECCCcCCcchhh
Confidence 641 24799999999999876543
No 52
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.24 E-value=1.5e-11 Score=120.45 Aligned_cols=110 Identities=17% Similarity=0.084 Sum_probs=86.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC--CCeEEEecCCCCCccccccC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS--PCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~--~ni~v~~~Da~~~p~~~~~~ 254 (646)
++.+|||+|||+|..+..++.. +.+.|+|+|+|+..++.+++|++..++ .++.++++|+..+....
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~---------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~--- 120 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSR---------QAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQP--- 120 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT---------TCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSC---
T ss_pred CCCeEEEcCCccCHHHHHHHHc---------cCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhh---
Confidence 6789999999999999887654 246899999999999999999999998 78999999987643210
Q ss_pred CCCCCCCCC-CCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHH--HHhhccCCeEEEEcCCCC
Q psy17365 255 ADGNKVPMK-FDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRG--VEMLAVGGKIAYSTCSLN 326 (646)
Q Consensus 255 ~~g~~~~~~-FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A--~~lLKpGG~LVYSTCSl~ 326 (646)
.... ||.|++|+|+. .+. ...++... .++|||||+|++++|+..
T Consensus 121 -----~~~~~fD~I~~~~~~~-~~~----------------------~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 121 -----QNQPHFDVVFLDPPFH-FNL----------------------AEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp -----CSSCCEEEEEECCCSS-SCH----------------------HHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred -----ccCCCCCEEEECCCCC-Ccc----------------------HHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 1247 99999999943 110 12345555 567999999999998875
No 53
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.22 E-value=1.2e-11 Score=132.75 Aligned_cols=110 Identities=13% Similarity=0.159 Sum_probs=83.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC-
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD- 256 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~- 256 (646)
+.+|||+|||+|..|..+|.. .+.|+|+|+++..++.+++|++.+|+.|+.++++|+..+.........
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~----------~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~ 283 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN----------FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREF 283 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG----------SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCC
T ss_pred CCEEEEccCCCCHHHHHHHhc----------CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccc
Confidence 678999999999999988752 468999999999999999999999999999999998765321110000
Q ss_pred ----CC-CCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 257 ----GN-KVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 257 ----g~-~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
+. .....||.|++|||+.|. ...++++|+++|+|||++|+-
T Consensus 284 ~~l~~~~~~~~~fD~Vv~dPPr~g~----------------------------~~~~~~~l~~~g~ivyvsc~p 329 (369)
T 3bt7_A 284 NRLQGIDLKSYQCETIFVDPPRSGL----------------------------DSETEKMVQAYPRILYISCNP 329 (369)
T ss_dssp TTGGGSCGGGCCEEEEEECCCTTCC----------------------------CHHHHHHHTTSSEEEEEESCH
T ss_pred ccccccccccCCCCEEEECcCcccc----------------------------HHHHHHHHhCCCEEEEEECCH
Confidence 00 000269999999997752 234566778999999999963
No 54
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.22 E-value=2.3e-11 Score=128.90 Aligned_cols=101 Identities=20% Similarity=0.266 Sum_probs=88.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEecCCCCCccccccC
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS-PCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~-~ni~v~~~Da~~~p~~~~~~ 254 (646)
.+|.+|||+|||+|+.+.. |. +.+.|+|+|+|+..++.+++|++.+|+ .++.++++|+..+.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~----------~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~------ 256 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK----------NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD------ 256 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT----------TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC------
T ss_pred CCCCEEEEccCccCHHHHh-cc----------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc------
Confidence 5899999999999999988 64 256899999999999999999999998 57999999997653
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCC
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLN 326 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~ 326 (646)
..||.|++|+|..+. .++..+.++|+|||.|+|++|+-.
T Consensus 257 -------~~fD~Vi~dpP~~~~--------------------------~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 257 -------VKGNRVIMNLPKFAH--------------------------KFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp -------CCEEEEEECCTTTGG--------------------------GGHHHHHHHEEEEEEEEEEEEESS
T ss_pred -------CCCcEEEECCcHhHH--------------------------HHHHHHHHHcCCCCEEEEEEeecC
Confidence 369999999996532 468889999999999999999987
No 55
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.22 E-value=4.7e-11 Score=119.82 Aligned_cols=132 Identities=14% Similarity=0.109 Sum_probs=100.9
Q ss_pred ccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHc-CCCCeEEEecCCCCCc
Q psy17365 170 PLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRL-NSPCAIITNHDASVMP 248 (646)
Q Consensus 170 ~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rl-g~~ni~v~~~Da~~~p 248 (646)
...+++.++.+|||+|||+|..+.++++.++ +.+.|+++|+++.+++.++++++.. |..++.+.+.|+...+
T Consensus 89 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-------~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~ 161 (258)
T 2pwy_A 89 VTLLDLAPGMRVLEAGTGSGGLTLFLARAVG-------EKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAE 161 (258)
T ss_dssp HHHTTCCTTCEEEEECCTTSHHHHHHHHHHC-------TTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCC
T ss_pred HHHcCCCCCCEEEEECCCcCHHHHHHHHHhC-------CCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcC
Confidence 3456788999999999999999999998864 5689999999999999999999988 8788999999987652
Q ss_pred cccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCcc
Q psy17365 249 NVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPL 328 (646)
Q Consensus 249 ~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ 328 (646)
. ....||.|++|+|. +. .+|.++.++|+|||+++.++.+.
T Consensus 162 ~----------~~~~~D~v~~~~~~---------~~------------------~~l~~~~~~L~~gG~l~~~~~~~--- 201 (258)
T 2pwy_A 162 L----------EEAAYDGVALDLME---------PW------------------KVLEKAALALKPDRFLVAYLPNI--- 201 (258)
T ss_dssp C----------CTTCEEEEEEESSC---------GG------------------GGHHHHHHHEEEEEEEEEEESCH---
T ss_pred C----------CCCCcCEEEECCcC---------HH------------------HHHHHHHHhCCCCCEEEEEeCCH---
Confidence 1 12469999998762 11 46889999999999999876543
Q ss_pred ccHHHHHHHHHHccCcEEEeec
Q psy17365 329 EDEAVIQRLIVETQGAVQLVDV 350 (646)
Q Consensus 329 ENE~VV~~~L~~~~~~~elv~~ 350 (646)
+...-+...|++.+ |..+.+
T Consensus 202 ~~~~~~~~~l~~~g--f~~~~~ 221 (258)
T 2pwy_A 202 TQVLELVRAAEAHP--FRLERV 221 (258)
T ss_dssp HHHHHHHHHHTTTT--EEEEEE
T ss_pred HHHHHHHHHHHHCC--CceEEE
Confidence 22223334455433 555544
No 56
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.21 E-value=5.8e-11 Score=115.53 Aligned_cols=125 Identities=14% Similarity=0.112 Sum_probs=100.1
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
+.++.+|||+|||+|..+..++.. +.+.|+|+|+++..++.+++++...+..++.+.+.|+..++
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------ 122 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL---------GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV------ 122 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT---------TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC------
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC------
Confidence 568899999999999999987753 46799999999999999999999999988999999986643
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHHH
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAVI 334 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~VV 334 (646)
...||.|+++.|. .....++..+.++|+|||++++++... +....+
T Consensus 123 ------~~~fD~i~~~~~~-------------------------~~~~~~l~~~~~~L~~gG~l~~~~~~~---~~~~~~ 168 (205)
T 3grz_A 123 ------DGKFDLIVANILA-------------------------EILLDLIPQLDSHLNEDGQVIFSGIDY---LQLPKI 168 (205)
T ss_dssp ------CSCEEEEEEESCH-------------------------HHHHHHGGGSGGGEEEEEEEEEEEEEG---GGHHHH
T ss_pred ------CCCceEEEECCcH-------------------------HHHHHHHHHHHHhcCCCCEEEEEecCc---ccHHHH
Confidence 2579999998651 112578899999999999999875443 345667
Q ss_pred HHHHHHccCcEEEeec
Q psy17365 335 QRLIVETQGAVQLVDV 350 (646)
Q Consensus 335 ~~~L~~~~~~~elv~~ 350 (646)
...+++.+ ++++.+
T Consensus 169 ~~~~~~~G--f~~~~~ 182 (205)
T 3grz_A 169 EQALAENS--FQIDLK 182 (205)
T ss_dssp HHHHHHTT--EEEEEE
T ss_pred HHHHHHcC--CceEEe
Confidence 77787765 666654
No 57
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.21 E-value=1.7e-11 Score=127.87 Aligned_cols=138 Identities=13% Similarity=0.056 Sum_probs=99.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHH----cCCCCeEEEecCCCCCccccc
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKR----LNSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~r----lg~~ni~v~~~Da~~~p~~~~ 252 (646)
.+.+|||+|||+|+.+..+++.. +.+.|+++|+|+..++.+++++.. ++.+++.++.+|+..+...
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~--------~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~-- 159 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHD--------SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRK-- 159 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTST--------TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGG--
T ss_pred CCCEEEEEcCCcCHHHHHHHhcC--------CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh--
Confidence 45799999999999999887642 357999999999999999999765 2346899999998764221
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC--CCcccc
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS--LNPLED 330 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS--l~p~EN 330 (646)
....||+|++|+|+.+.|.. .. ..+.+++..+.++|+|||+|++.+|+ +.+.+.
T Consensus 160 -------~~~~fD~Ii~d~~~~~~~~~---~~--------------l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~ 215 (296)
T 1inl_A 160 -------FKNEFDVIIIDSTDPTAGQG---GH--------------LFTEEFYQACYDALKEDGVFSAETEDPFYDIGWF 215 (296)
T ss_dssp -------CSSCEEEEEEEC---------------------------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHH
T ss_pred -------CCCCceEEEEcCCCcccCch---hh--------------hhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHH
Confidence 12579999999986533310 00 02357889999999999999999998 567777
Q ss_pred HHHHHHHHHHccCcEEEee
Q psy17365 331 EAVIQRLIVETQGAVQLVD 349 (646)
Q Consensus 331 E~VV~~~L~~~~~~~elv~ 349 (646)
..+++.+.+.++ .+.+..
T Consensus 216 ~~~~~~l~~~F~-~v~~~~ 233 (296)
T 1inl_A 216 KLAYRRISKVFP-ITRVYL 233 (296)
T ss_dssp HHHHHHHHHHCS-EEEEEE
T ss_pred HHHHHHHHHHCC-ceEEEE
Confidence 777777666554 355443
No 58
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.21 E-value=1.2e-10 Score=113.90 Aligned_cols=139 Identities=12% Similarity=0.113 Sum_probs=107.9
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccc
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~ 251 (646)
.+++.++.+|||+|||+|..+..+++..+ +.+.|+++|+++..++.+++++...+.+++.++.+|+..++.
T Consensus 32 ~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-- 102 (219)
T 3dh0_A 32 EFGLKEGMTVLDVGTGAGFYLPYLSKMVG-------EKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPL-- 102 (219)
T ss_dssp HHTCCTTCEEEESSCTTCTTHHHHHHHHT-------TTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSS--
T ss_pred HhCCCCCCEEEEEecCCCHHHHHHHHHhC-------CCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCC--
Confidence 34678899999999999999999998864 467999999999999999999999999899999999977641
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCcc---
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPL--- 328 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~--- 328 (646)
....||.|++... +..-++ ...+|..+.++|||||++++++++....
T Consensus 103 --------~~~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~ 152 (219)
T 3dh0_A 103 --------PDNTVDFIFMAFT------FHELSE----------------PLKFLEELKRVAKPFAYLAIIDWKKEERDKG 152 (219)
T ss_dssp --------CSSCEEEEEEESC------GGGCSS----------------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSS
T ss_pred --------CCCCeeEEEeehh------hhhcCC----------------HHHHHHHHHHHhCCCeEEEEEEecccccccC
Confidence 1257999997532 211111 2478999999999999999987654332
Q ss_pred ------ccHHHHHHHHHHccCcEEEeecc
Q psy17365 329 ------EDEAVIQRLIVETQGAVQLVDVS 351 (646)
Q Consensus 329 ------ENE~VV~~~L~~~~~~~elv~~~ 351 (646)
-+...+..+|++.+ |+++.+.
T Consensus 153 ~~~~~~~~~~~~~~~l~~~G--f~~~~~~ 179 (219)
T 3dh0_A 153 PPPEEVYSEWEVGLILEDAG--IRVGRVV 179 (219)
T ss_dssp CCGGGSCCHHHHHHHHHHTT--CEEEEEE
T ss_pred CchhcccCHHHHHHHHHHCC--CEEEEEE
Confidence 23567788888876 6666543
No 59
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.21 E-value=1.2e-11 Score=123.57 Aligned_cols=112 Identities=11% Similarity=0.059 Sum_probs=90.5
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC--CeEEEecCCCCCcccc
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP--CAIITNHDASVMPNVL 251 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~--ni~v~~~Da~~~p~~~ 251 (646)
+++++.+|||+|||+|..|..+|+.+. +.+.|+++|+++.+++.+++++++.|.. ++.++++|+..+....
T Consensus 53 ~~~~~~~vLdiG~G~G~~~~~la~~~~-------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~ 125 (221)
T 3dr5_A 53 NGNGSTGAIAITPAAGLVGLYILNGLA-------DNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRL 125 (221)
T ss_dssp CCTTCCEEEEESTTHHHHHHHHHHHSC-------TTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGS
T ss_pred CCCCCCCEEEEcCCchHHHHHHHHhCC-------CCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHh
Confidence 344566999999999999999998864 4789999999999999999999999986 7999999987643211
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
....||.|++|++... ....+..+.++|||||+||+..+.+
T Consensus 126 --------~~~~fD~V~~d~~~~~-------------------------~~~~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 126 --------ANDSYQLVFGQVSPMD-------------------------LKALVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp --------CTTCEEEEEECCCTTT-------------------------HHHHHHHHHHHEEEEEEEEETTTTG
T ss_pred --------cCCCcCeEEEcCcHHH-------------------------HHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 0257999999975211 1247889999999999999987765
No 60
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.20 E-value=2.3e-11 Score=119.22 Aligned_cols=109 Identities=17% Similarity=0.099 Sum_probs=84.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
++.+|||+|||+|..+..++.. ....|+|+|+|+..++.+++|++..+..++.++++|+..+...
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~---------~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~------ 118 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSR---------YAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQ------ 118 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT---------TCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSS------
T ss_pred CCCeEEEeCCCcCHHHHHHHhc---------CCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhh------
Confidence 6789999999999999987654 2458999999999999999999999998999999998763211
Q ss_pred CCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHH--HhhccCCeEEEEcCCCC
Q psy17365 257 GNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGV--EMLAVGGKIAYSTCSLN 326 (646)
Q Consensus 257 g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~--~lLKpGG~LVYSTCSl~ 326 (646)
....||.|++|+|+. .+. ...++.... ++|+|||+|++++|+..
T Consensus 119 ---~~~~fD~V~~~~p~~-~~~----------------------~~~~l~~l~~~~~L~pgG~l~i~~~~~~ 164 (202)
T 2fpo_A 119 ---KGTPHNIVFVDPPFR-RGL----------------------LEETINLLEDNGWLADEALIYVESEVEN 164 (202)
T ss_dssp ---CCCCEEEEEECCSSS-TTT----------------------HHHHHHHHHHTTCEEEEEEEEEEEEGGG
T ss_pred ---cCCCCCEEEECCCCC-CCc----------------------HHHHHHHHHhcCccCCCcEEEEEECCCc
Confidence 124799999999942 110 013344444 35999999999988754
No 61
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.20 E-value=3.7e-11 Score=122.11 Aligned_cols=134 Identities=16% Similarity=0.060 Sum_probs=101.1
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~ 252 (646)
+.+.++.+|||+|||+|..+..+|... +.+.|+|+|+++++++.+++|++++|..|+.++++|+..++...
T Consensus 76 ~~~~~~~~vLDiG~G~G~~~i~la~~~--------~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~- 146 (249)
T 3g89_A 76 PLWQGPLRVLDLGTGAGFPGLPLKIVR--------PELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREA- 146 (249)
T ss_dssp SCCCSSCEEEEETCTTTTTHHHHHHHC--------TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTST-
T ss_pred cccCCCCEEEEEcCCCCHHHHHHHHHC--------CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhccc-
Confidence 345678999999999999999998774 47899999999999999999999999999999999987764210
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHH
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEA 332 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~ 332 (646)
.....||.|++.+- .+ ...++..+.++|||||++++..+....+| -.
T Consensus 147 ------~~~~~fD~I~s~a~----------~~----------------~~~ll~~~~~~LkpgG~l~~~~g~~~~~e-~~ 193 (249)
T 3g89_A 147 ------GHREAYARAVARAV----------AP----------------LCVLSELLLPFLEVGGAAVAMKGPRVEEE-LA 193 (249)
T ss_dssp ------TTTTCEEEEEEESS----------CC----------------HHHHHHHHGGGEEEEEEEEEEECSCCHHH-HT
T ss_pred ------ccCCCceEEEECCc----------CC----------------HHHHHHHHHHHcCCCeEEEEEeCCCcHHH-HH
Confidence 01257999997531 00 13678899999999999998777644333 33
Q ss_pred HHHHHHHHccCcEEEeec
Q psy17365 333 VIQRLIVETQGAVQLVDV 350 (646)
Q Consensus 333 VV~~~L~~~~~~~elv~~ 350 (646)
.+...++..+ ++++.+
T Consensus 194 ~~~~~l~~~G--~~~~~~ 209 (249)
T 3g89_A 194 PLPPALERLG--GRLGEV 209 (249)
T ss_dssp THHHHHHHHT--EEEEEE
T ss_pred HHHHHHHHcC--CeEEEE
Confidence 4555667765 444443
No 62
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.19 E-value=8.8e-11 Score=116.06 Aligned_cols=117 Identities=17% Similarity=0.198 Sum_probs=89.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCC
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~ 255 (646)
.++.+|||+|||+|..+..+|... +...|+|+|+++..+..+++++++.|.+|+.++++|+..++....
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~--------p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~--- 105 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN--------PDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFE--- 105 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC--------TTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCC---
T ss_pred CCCceEEEEecCCCHHHHHHHHHC--------CCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcC---
Confidence 357799999999999999999874 467999999999999999999999999999999999987543211
Q ss_pred CCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
...||.|++..|+ |.. +- ......+ .+..+|..+.++|||||.|+++|
T Consensus 106 -----~~~~d~v~~~~~~---------p~~--~~-~~~~~rl--~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 106 -----PGEVKRVYLNFSD---------PWP--KK-RHEKRRL--TYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp -----TTSCCEEEEESCC---------CCC--SG-GGGGGST--TSHHHHHHHHHHHTTSCEEEEEE
T ss_pred -----cCCcCEEEEECCC---------CCc--Cc-ccccccc--CcHHHHHHHHHHcCCCCEEEEEe
Confidence 2469999886552 111 10 0000111 25678999999999999999886
No 63
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.19 E-value=1.1e-10 Score=116.71 Aligned_cols=122 Identities=14% Similarity=0.147 Sum_probs=97.9
Q ss_pred EecccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEE
Q psy17365 161 RQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIIT 240 (646)
Q Consensus 161 ~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~ 240 (646)
.|+++++.....+++.++.+|||+|||+|..+..+++. .+.|+++|+++..++.+++++...+.+++.+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~----------~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~ 74 (239)
T 1xxl_A 5 HHHHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPY----------VQECIGVDATKEMVEVASSFAQEKGVENVRFQ 74 (239)
T ss_dssp -CHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGG----------SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEE
T ss_pred ccCCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHh----------CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEE
Confidence 37778888888899999999999999999999888754 24899999999999999999999998999999
Q ss_pred ecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEE
Q psy17365 241 NHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAY 320 (646)
Q Consensus 241 ~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVY 320 (646)
.+|+..++. ....||.|++... +..-++ ...+|.++.++|||||+++.
T Consensus 75 ~~d~~~~~~----------~~~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~LkpgG~l~~ 122 (239)
T 1xxl_A 75 QGTAESLPF----------PDDSFDIITCRYA------AHHFSD----------------VRKAVREVARVLKQDGRFLL 122 (239)
T ss_dssp ECBTTBCCS----------CTTCEEEEEEESC------GGGCSC----------------HHHHHHHHHHHEEEEEEEEE
T ss_pred ecccccCCC----------CCCcEEEEEECCc------hhhccC----------------HHHHHHHHHHHcCCCcEEEE
Confidence 999877642 1257999997522 111111 13689999999999999998
Q ss_pred EcCC
Q psy17365 321 STCS 324 (646)
Q Consensus 321 STCS 324 (646)
++..
T Consensus 123 ~~~~ 126 (239)
T 1xxl_A 123 VDHY 126 (239)
T ss_dssp EEEC
T ss_pred EEcC
Confidence 7654
No 64
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.19 E-value=7.6e-11 Score=120.22 Aligned_cols=113 Identities=15% Similarity=0.164 Sum_probs=93.5
Q ss_pred cccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHc-C--CCCeEEEecCCC
Q psy17365 169 PPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRL-N--SPCAIITNHDAS 245 (646)
Q Consensus 169 ~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rl-g--~~ni~v~~~Da~ 245 (646)
....+++.++.+|||+|||+|..+.+++..++ +.+.|+++|+++.+++.++++++.. | ..++.+.++|+.
T Consensus 91 i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-------~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~ 163 (280)
T 1i9g_A 91 IVHEGDIFPGARVLEAGAGSGALTLSLLRAVG-------PAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLA 163 (280)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHHC-------TTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGG
T ss_pred HHHHcCCCCCCEEEEEcccccHHHHHHHHHhC-------CCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchH
Confidence 34456889999999999999999999998764 5789999999999999999999988 7 678999999987
Q ss_pred CCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 246 VMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 246 ~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
..+. ....||.|++|+| +|. .+|.++.++|+|||+|++++++.
T Consensus 164 ~~~~----------~~~~~D~v~~~~~---------~~~------------------~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 164 DSEL----------PDGSVDRAVLDML---------APW------------------EVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp GCCC----------CTTCEEEEEEESS---------CGG------------------GGHHHHHHHEEEEEEEEEEESSH
T ss_pred hcCC----------CCCceeEEEECCc---------CHH------------------HHHHHHHHhCCCCCEEEEEeCCH
Confidence 6531 1246999999876 221 46889999999999999887654
No 65
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.18 E-value=1.3e-10 Score=121.20 Aligned_cols=105 Identities=11% Similarity=0.153 Sum_probs=87.4
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccc
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~ 251 (646)
++++++|++|||+|||||+.|+.++... +.+.|+|+|+|+.+++.+++++++.|..++.++++|+..++.
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~--------~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d-- 186 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHV--------YGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDG-- 186 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHT--------TCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGG--
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHc--------cCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCC--
Confidence 4688999999999999999887665443 367999999999999999999999999889999999987641
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
..||+|++++- .++ ..+++.++.++|||||+||..
T Consensus 187 ----------~~FDvV~~~a~---------~~d----------------~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 187 ----------LEFDVLMVAAL---------AEP----------------KRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp ----------CCCSEEEECTT---------CSC----------------HHHHHHHHHHHCCTTCEEEEE
T ss_pred ----------CCcCEEEECCC---------ccC----------------HHHHHHHHHHHcCCCcEEEEE
Confidence 47999998642 122 237899999999999999975
No 66
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.18 E-value=1.8e-10 Score=109.50 Aligned_cols=134 Identities=15% Similarity=0.192 Sum_probs=100.7
Q ss_pred cccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC--eEEEecCCCCCc
Q psy17365 171 LLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC--AIITNHDASVMP 248 (646)
Q Consensus 171 ~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n--i~v~~~Da~~~p 248 (646)
..+.+.++.+|||+|||+|..+..++.. .+.|+++|+++..++.+++++...+..+ +.+.+.|+....
T Consensus 46 ~~~~~~~~~~vLdiG~G~G~~~~~~~~~----------~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~ 115 (194)
T 1dus_A 46 ENVVVDKDDDILDLGCGYGVIGIALADE----------VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV 115 (194)
T ss_dssp HHCCCCTTCEEEEETCTTSHHHHHHGGG----------SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC
T ss_pred HHcccCCCCeEEEeCCCCCHHHHHHHHc----------CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccc
Confidence 3456678999999999999999888754 3589999999999999999999999887 999999986632
Q ss_pred cccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCcc
Q psy17365 249 NVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPL 328 (646)
Q Consensus 249 ~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ 328 (646)
. ...||.|++++|... .......++..+.++|+|||+++.++++.
T Consensus 116 ~-----------~~~~D~v~~~~~~~~---------------------~~~~~~~~l~~~~~~L~~gG~l~~~~~~~--- 160 (194)
T 1dus_A 116 K-----------DRKYNKIITNPPIRA---------------------GKEVLHRIIEEGKELLKDNGEIWVVIQTK--- 160 (194)
T ss_dssp T-----------TSCEEEEEECCCSTT---------------------CHHHHHHHHHHHHHHEEEEEEEEEEEEST---
T ss_pred c-----------cCCceEEEECCCccc---------------------chhHHHHHHHHHHHHcCCCCEEEEEECCC---
Confidence 1 247999999887321 01233578999999999999999987765
Q ss_pred ccHHHHHHHHHHccCcEEEee
Q psy17365 329 EDEAVIQRLIVETQGAVQLVD 349 (646)
Q Consensus 329 ENE~VV~~~L~~~~~~~elv~ 349 (646)
++...+.+.|++.-..++.+.
T Consensus 161 ~~~~~~~~~l~~~~~~~~~~~ 181 (194)
T 1dus_A 161 QGAKSLAKYMKDVFGNVETVT 181 (194)
T ss_dssp HHHHHHHHHHHHHHSCCEEEE
T ss_pred CChHHHHHHHHHHhcceEEEe
Confidence 223334555555433455543
No 67
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.18 E-value=2.5e-10 Score=114.45 Aligned_cols=113 Identities=16% Similarity=0.131 Sum_probs=90.7
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC-eEEEecCCCCCcccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC-AIITNHDASVMPNVL 251 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n-i~v~~~Da~~~p~~~ 251 (646)
..+.++.+|||+|||+|..+..+++.. .+.|+++|+++..+..+++++...|+.+ +.++++|+..++.
T Consensus 42 ~~~~~~~~vLDiG~G~G~~~~~l~~~~---------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-- 110 (257)
T 3f4k_A 42 NELTDDAKIADIGCGTGGQTLFLADYV---------KGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPF-- 110 (257)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHC---------CSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSS--
T ss_pred hcCCCCCeEEEeCCCCCHHHHHHHHhC---------CCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCC--
Confidence 356789999999999999999999873 3499999999999999999999999876 9999999977652
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCc
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNP 327 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p 327 (646)
....||.|++...... - + ...+|..+.++|||||+|+.++++...
T Consensus 111 --------~~~~fD~v~~~~~l~~------~-~----------------~~~~l~~~~~~L~pgG~l~~~~~~~~~ 155 (257)
T 3f4k_A 111 --------QNEELDLIWSEGAIYN------I-G----------------FERGMNEWSKYLKKGGFIAVSEASWFT 155 (257)
T ss_dssp --------CTTCEEEEEEESCSCC------C-C----------------HHHHHHHHHTTEEEEEEEEEEEEEESS
T ss_pred --------CCCCEEEEEecChHhh------c-C----------------HHHHHHHHHHHcCCCcEEEEEEeeccC
Confidence 1257999998632111 0 1 136899999999999999999876433
No 68
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.17 E-value=2.4e-11 Score=121.45 Aligned_cols=122 Identities=11% Similarity=0.052 Sum_probs=96.0
Q ss_pred EecccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEE
Q psy17365 161 RQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CAII 239 (646)
Q Consensus 161 ~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni~v 239 (646)
.|.....+...++...++.+|||+|||+|..|..+|... +.+.|+++|+++.+++.+++++++.++. ++.+
T Consensus 55 ~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~ 126 (232)
T 3ntv_A 55 VDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASIS--------DDIHVTTIERNETMIQYAKQNLATYHFENQVRI 126 (232)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTC--------TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEE
T ss_pred cCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEE
Confidence 344444455555667788999999999999999998743 4789999999999999999999999986 7999
Q ss_pred EecCCCCCcc-ccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeE
Q psy17365 240 TNHDASVMPN-VLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKI 318 (646)
Q Consensus 240 ~~~Da~~~p~-~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~L 318 (646)
+.+|+..+.. .. ...||.|++|+++.. +..++..+.++|||||+|
T Consensus 127 ~~~d~~~~~~~~~---------~~~fD~V~~~~~~~~-------------------------~~~~l~~~~~~LkpgG~l 172 (232)
T 3ntv_A 127 IEGNALEQFENVN---------DKVYDMIFIDAAKAQ-------------------------SKKFFEIYTPLLKHQGLV 172 (232)
T ss_dssp EESCGGGCHHHHT---------TSCEEEEEEETTSSS-------------------------HHHHHHHHGGGEEEEEEE
T ss_pred EECCHHHHHHhhc---------cCCccEEEEcCcHHH-------------------------HHHHHHHHHHhcCCCeEE
Confidence 9999976432 11 257999999976322 235789999999999999
Q ss_pred EEEcCC
Q psy17365 319 AYSTCS 324 (646)
Q Consensus 319 VYSTCS 324 (646)
|+..+-
T Consensus 173 v~d~~~ 178 (232)
T 3ntv_A 173 ITDNVL 178 (232)
T ss_dssp EEECTT
T ss_pred EEeeCC
Confidence 985443
No 69
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.17 E-value=1.8e-10 Score=115.99 Aligned_cols=141 Identities=11% Similarity=0.118 Sum_probs=98.8
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHc--------CCCCeEEEecCCCC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRL--------NSPCAIITNHDASV 246 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rl--------g~~ni~v~~~Da~~ 246 (646)
+.++.+|||+|||+|..+.++|... +.+.|+|+|+++..+..++++++.+ +..|+.++.+|+..
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~--------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~ 118 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAF--------PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMK 118 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHS--------TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTS
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhC--------CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHH
Confidence 4578899999999999999999874 4679999999999999999999887 88899999999986
Q ss_pred C-ccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 247 M-PNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 247 ~-p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
+ +... ....||.|++..|.. |.+-.. ....+ .+..+|..+.++|+|||+|+++|-
T Consensus 119 ~l~~~~--------~~~~~d~v~~~~p~p-----------~~k~~~-~~~r~--~~~~~l~~~~~~LkpgG~l~~~td-- 174 (246)
T 2vdv_E 119 FLPNFF--------EKGQLSKMFFCFPDP-----------HFKQRK-HKARI--ITNTLLSEYAYVLKEGGVVYTITD-- 174 (246)
T ss_dssp CGGGTS--------CTTCEEEEEEESCCC-----------C-------CSSC--CCHHHHHHHHHHEEEEEEEEEEES--
T ss_pred HHHHhc--------cccccCEEEEECCCc-----------ccccch-hHHhh--ccHHHHHHHHHHcCCCCEEEEEec--
Confidence 3 3211 124688888765421 111000 00011 135889999999999999998652
Q ss_pred CccccHHHHHHHHHHccCcEEEee
Q psy17365 326 NPLEDEAVIQRLIVETQGAVQLVD 349 (646)
Q Consensus 326 ~p~ENE~VV~~~L~~~~~~~elv~ 349 (646)
..+....+...+..++. ++.+.
T Consensus 175 -~~~~~~~~~~~~~~~~~-~~~~~ 196 (246)
T 2vdv_E 175 -VKDLHEWMVKHLEEHPL-FERLS 196 (246)
T ss_dssp -CHHHHHHHHHHHHHSTT-EEECC
T ss_pred -cHHHHHHHHHHHHhCcC-eEecC
Confidence 23333445555666654 66654
No 70
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.17 E-value=3.3e-12 Score=129.20 Aligned_cols=125 Identities=14% Similarity=0.144 Sum_probs=93.8
Q ss_pred ccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEec
Q psy17365 164 AVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CAIITNH 242 (646)
Q Consensus 164 ~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni~v~~~ 242 (646)
....+...++...++.+|||+|||+|..|..+|+.+. +.|.|+++|+++..++.+++++++.|.. +|.++.+
T Consensus 47 ~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~-------~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g 119 (242)
T 3r3h_A 47 EQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALP-------DDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLG 119 (242)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSC-------TTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEES
T ss_pred HHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCC-------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc
Confidence 3333444445556778999999999999999998763 3789999999999999999999999986 7999999
Q ss_pred CCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 243 DASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 243 Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
|+..+..... ..+ ....||.|++|++... ....+..+.++|||||+||+..
T Consensus 120 da~~~l~~~~--~~~--~~~~fD~V~~d~~~~~-------------------------~~~~l~~~~~~LkpGG~lv~d~ 170 (242)
T 3r3h_A 120 PALDTLHSLL--NEG--GEHQFDFIFIDADKTN-------------------------YLNYYELALKLVTPKGLIAIDN 170 (242)
T ss_dssp CHHHHHHHHH--HHH--CSSCEEEEEEESCGGG-------------------------HHHHHHHHHHHEEEEEEEEEEC
T ss_pred CHHHHHHHHh--hcc--CCCCEeEEEEcCChHH-------------------------hHHHHHHHHHhcCCCeEEEEEC
Confidence 9876432110 000 0257999999976111 1246889999999999999865
Q ss_pred CC
Q psy17365 323 CS 324 (646)
Q Consensus 323 CS 324 (646)
+.
T Consensus 171 ~~ 172 (242)
T 3r3h_A 171 IF 172 (242)
T ss_dssp SS
T ss_pred Cc
Confidence 54
No 71
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.17 E-value=1.3e-11 Score=124.16 Aligned_cols=124 Identities=15% Similarity=0.165 Sum_probs=94.4
Q ss_pred ccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEecCCCC
Q psy17365 168 IPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CAIITNHDASV 246 (646)
Q Consensus 168 l~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni~v~~~Da~~ 246 (646)
+...++...++.+|||+|||+|..|..+|+.+. +.+.|+++|+++.+++.+++++++.|.. ++.++.+|+..
T Consensus 61 ~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~-------~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~ 133 (237)
T 3c3y_A 61 LMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIP-------DDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAML 133 (237)
T ss_dssp HHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSC-------TTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred HHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCC-------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 333444455678999999999999999999863 3689999999999999999999999986 58999999875
Q ss_pred CccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCC
Q psy17365 247 MPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLN 326 (646)
Q Consensus 247 ~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~ 326 (646)
+..... ..+ .....||.|++|++++ .+..++..+.++|+|||+||+.+|.+.
T Consensus 134 ~l~~l~--~~~-~~~~~fD~I~~d~~~~-------------------------~~~~~l~~~~~~L~pGG~lv~d~~~~~ 185 (237)
T 3c3y_A 134 ALDNLL--QGQ-ESEGSYDFGFVDADKP-------------------------NYIKYHERLMKLVKVGGIVAYDNTLWG 185 (237)
T ss_dssp HHHHHH--HST-TCTTCEEEEEECSCGG-------------------------GHHHHHHHHHHHEEEEEEEEEECTTGG
T ss_pred HHHHHH--hcc-CCCCCcCEEEECCchH-------------------------HHHHHHHHHHHhcCCCeEEEEecCCcC
Confidence 421110 000 0025799999997632 124678899999999999999987543
No 72
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.17 E-value=2e-10 Score=114.39 Aligned_cols=116 Identities=14% Similarity=0.073 Sum_probs=88.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCC-ccccccCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVM-PNVLYTDA 255 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~-p~~~~~~~ 255 (646)
++..|||+|||+|..+..+|... +...|+|+|+++..+..+++++++.|..|+.++++|+..+ +...
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~--------p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~---- 101 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDR--------PEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMI---- 101 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHC--------TTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHS----
T ss_pred CCCeEEEEeeeChHHHHHHHHHC--------CCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHc----
Confidence 67799999999999999999874 5678999999999999999999999999999999998774 2111
Q ss_pred CCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
....||.|++..|.. +.+......+ -.|..++..+.++|||||+|+.+|
T Consensus 102 ----~~~~~d~v~~~~~~p----~~~~~~~~rr----------~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 102 ----PDNSLRMVQLFFPDP----WHKARHNKRR----------IVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp ----CTTCEEEEEEESCCC----CCSGGGGGGS----------SCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----CCCChheEEEeCCCC----ccchhhhhhh----------hhhHHHHHHHHHHcCCCcEEEEEe
Confidence 125799999874411 0011110000 123468999999999999999887
No 73
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.16 E-value=3e-10 Score=112.36 Aligned_cols=109 Identities=16% Similarity=0.155 Sum_probs=86.0
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccccc
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYT 253 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~ 253 (646)
.+.++.+|||+|||+|..+..+++.++ +.+.|+|+|+++..++.+.+++++. +++.++.+|+.......
T Consensus 70 ~~~~~~~vLDlG~G~G~~~~~la~~~~-------~~~~v~~vD~s~~~~~~~~~~~~~~--~~v~~~~~d~~~~~~~~-- 138 (227)
T 1g8a_A 70 PIKPGKSVLYLGIASGTTASHVSDIVG-------WEGKIFGIEFSPRVLRELVPIVEER--RNIVPILGDATKPEEYR-- 138 (227)
T ss_dssp CCCTTCEEEEETTTSTTHHHHHHHHHC-------TTSEEEEEESCHHHHHHHHHHHSSC--TTEEEEECCTTCGGGGT--
T ss_pred CCCCCCEEEEEeccCCHHHHHHHHHhC-------CCeEEEEEECCHHHHHHHHHHHhcc--CCCEEEEccCCCcchhh--
Confidence 477899999999999999999998874 4689999999999999999988765 78999999987632111
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
.....||.|++|+| .++ ....++..+.++|||||+++++.
T Consensus 139 -----~~~~~~D~v~~~~~---------~~~---------------~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 139 -----ALVPKVDVIFEDVA---------QPT---------------QAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp -----TTCCCEEEEEECCC---------STT---------------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----cccCCceEEEECCC---------CHh---------------HHHHHHHHHHHhcCCCCEEEEEE
Confidence 01247999999987 111 11234889999999999999874
No 74
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.16 E-value=2.2e-10 Score=119.29 Aligned_cols=115 Identities=12% Similarity=0.042 Sum_probs=91.5
Q ss_pred cccC-CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEecCCCCCc
Q psy17365 171 LLLD-VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CAIITNHDASVMP 248 (646)
Q Consensus 171 ~~Ld-~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni~v~~~Da~~~p 248 (646)
..+. ++++.+|||+|||+|..+..+++.. ...|+++|+++..++.++++++..|+. ++.+..+|+..++
T Consensus 110 ~~l~~~~~~~~vLDiGcG~G~~~~~la~~~---------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 180 (312)
T 3vc1_A 110 DHLGQAGPDDTLVDAGCGRGGSMVMAHRRF---------GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP 180 (312)
T ss_dssp TTSCCCCTTCEEEEESCTTSHHHHHHHHHH---------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred HHhccCCCCCEEEEecCCCCHHHHHHHHHc---------CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC
Confidence 3444 7899999999999999999999874 358999999999999999999999986 7999999998764
Q ss_pred cccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCc
Q psy17365 249 NVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNP 327 (646)
Q Consensus 249 ~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p 327 (646)
. ....||.|++.- ++. .+ . +..+|..+.++|||||+|++++.....
T Consensus 181 ~----------~~~~fD~V~~~~------~l~-------~~---------~-~~~~l~~~~~~LkpgG~l~~~~~~~~~ 226 (312)
T 3vc1_A 181 F----------DKGAVTASWNNE------STM-------YV---------D-LHDLFSEHSRFLKVGGRYVTITGCWNP 226 (312)
T ss_dssp C----------CTTCEEEEEEES------CGG-------GS---------C-HHHHHHHHHHHEEEEEEEEEEEEEECT
T ss_pred C----------CCCCEeEEEECC------chh-------hC---------C-HHHHHHHHHHHcCCCcEEEEEEccccc
Confidence 1 125799999631 111 11 0 457899999999999999998755433
No 75
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.16 E-value=7.3e-11 Score=118.31 Aligned_cols=133 Identities=16% Similarity=0.108 Sum_probs=100.0
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccccc
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYT 253 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~ 253 (646)
++.++.+|||+|||+|..+..++... +.+.|+|+|+++.+++.++++++++|..++.++++|+..++...
T Consensus 67 ~~~~~~~vLDiG~G~G~~~~~la~~~--------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~-- 136 (240)
T 1xdz_A 67 DFNQVNTICDVGAGAGFPSLPIKICF--------PHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRK-- 136 (240)
T ss_dssp CGGGCCEEEEECSSSCTTHHHHHHHC--------TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCT--
T ss_pred ccCCCCEEEEecCCCCHHHHHHHHhC--------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccc--
Confidence 45678899999999999999998753 46799999999999999999999999989999999987654210
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHH
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAV 333 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~V 333 (646)
.....||.|++++. .+ ...++..+.++|||||++++..+....+|-+.
T Consensus 137 -----~~~~~fD~V~~~~~----------~~----------------~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~- 184 (240)
T 1xdz_A 137 -----DVRESYDIVTARAV----------AR----------------LSVLSELCLPLVKKNGLFVALKAASAEEELNA- 184 (240)
T ss_dssp -----TTTTCEEEEEEECC----------SC----------------HHHHHHHHGGGEEEEEEEEEEECC-CHHHHHH-
T ss_pred -----cccCCccEEEEecc----------CC----------------HHHHHHHHHHhcCCCCEEEEEeCCCchHHHHH-
Confidence 01247999998641 01 23688999999999999998877665444333
Q ss_pred HHHHHHHccCcEEEeec
Q psy17365 334 IQRLIVETQGAVQLVDV 350 (646)
Q Consensus 334 V~~~L~~~~~~~elv~~ 350 (646)
+...++.++ ++++.+
T Consensus 185 ~~~~l~~~g--~~~~~~ 199 (240)
T 1xdz_A 185 GKKAITTLG--GELENI 199 (240)
T ss_dssp HHHHHHHTT--EEEEEE
T ss_pred HHHHHHHcC--CeEeEE
Confidence 445566665 555443
No 76
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.15 E-value=8.1e-11 Score=111.69 Aligned_cols=131 Identities=15% Similarity=0.089 Sum_probs=101.0
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEecCCCCCccc
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS-PCAIITNHDASVMPNV 250 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~-~ni~v~~~Da~~~p~~ 250 (646)
.+++.++.+|||+|||+|..+..++.. . +.|+++|+++..++.++++++..+. .++.+.++|+.....
T Consensus 28 ~~~~~~~~~vldiG~G~G~~~~~l~~~---------~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~- 96 (192)
T 1l3i_A 28 LAEPGKNDVAVDVGCGTGGVTLELAGR---------V-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALC- 96 (192)
T ss_dssp HHCCCTTCEEEEESCTTSHHHHHHHTT---------S-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHT-
T ss_pred hcCCCCCCEEEEECCCCCHHHHHHHHh---------c-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcc-
Confidence 456788999999999999999888754 2 6899999999999999999999998 789999998765110
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCcccc
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLED 330 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~EN 330 (646)
....||.|+++.+.. + ...+|..+.++|+|||++++++++. ++
T Consensus 97 ---------~~~~~D~v~~~~~~~---------~----------------~~~~l~~~~~~l~~gG~l~~~~~~~---~~ 139 (192)
T 1l3i_A 97 ---------KIPDIDIAVVGGSGG---------E----------------LQEILRIIKDKLKPGGRIIVTAILL---ET 139 (192)
T ss_dssp ---------TSCCEEEEEESCCTT---------C----------------HHHHHHHHHHTEEEEEEEEEEECBH---HH
T ss_pred ---------cCCCCCEEEECCchH---------H----------------HHHHHHHHHHhcCCCcEEEEEecCc---ch
Confidence 013699999986521 1 1468999999999999999988764 44
Q ss_pred HHHHHHHHHHccCcEEEeec
Q psy17365 331 EAVIQRLIVETQGAVQLVDV 350 (646)
Q Consensus 331 E~VV~~~L~~~~~~~elv~~ 350 (646)
..-+..++++++-.++.+++
T Consensus 140 ~~~~~~~l~~~g~~~~~~~~ 159 (192)
T 1l3i_A 140 KFEAMECLRDLGFDVNITEL 159 (192)
T ss_dssp HHHHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHHHCCCceEEEEE
Confidence 55566777777644555443
No 77
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.14 E-value=9.7e-11 Score=113.23 Aligned_cols=134 Identities=14% Similarity=0.120 Sum_probs=89.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCC-CcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccccc
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVP-SGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYT 253 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~-~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~ 253 (646)
++++.+|||+|||||+.|..+++.++ + .+.|+|+|+++.. ..+++.++.+|+...+.....
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~-------~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~~ 81 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTK-------NYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNIK 81 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTT-------TSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC-
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcC-------CCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhhc
Confidence 46788999999999999999998862 2 5899999999831 346788899998765410000
Q ss_pred CC---CC------------CCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeE
Q psy17365 254 DA---DG------------NKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKI 318 (646)
Q Consensus 254 ~~---~g------------~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~L 318 (646)
.+ +. ......||.|++|.++...|.. ..+......++..+|..+.++|||||++
T Consensus 82 ~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~-----------~~d~~~~~~~~~~~l~~~~~~LkpgG~l 150 (201)
T 2plw_A 82 NINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNK-----------IDDHLNSCELTLSITHFMEQYINIGGTY 150 (201)
T ss_dssp ----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCH-----------HHHHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred cccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCc-----------ccCHHHHHHHHHHHHHHHHHHccCCCEE
Confidence 00 00 0012479999999765443320 0112233456778999999999999999
Q ss_pred EEEcCCCCccccHHHHHHHHHH
Q psy17365 319 AYSTCSLNPLEDEAVIQRLIVE 340 (646)
Q Consensus 319 VYSTCSl~p~ENE~VV~~~L~~ 340 (646)
+.++.. .++...+.+.|+.
T Consensus 151 v~~~~~---~~~~~~l~~~l~~ 169 (201)
T 2plw_A 151 IVKMYL---GSQTNNLKTYLKG 169 (201)
T ss_dssp EEEEEC---STTHHHHHHHHHT
T ss_pred EEEEeC---CCCHHHHHHHHHH
Confidence 975433 3455556666655
No 78
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.14 E-value=2.1e-11 Score=120.17 Aligned_cols=129 Identities=16% Similarity=0.149 Sum_probs=96.5
Q ss_pred EecccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC-eEE
Q psy17365 161 RQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC-AII 239 (646)
Q Consensus 161 ~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n-i~v 239 (646)
.+.....+...++...++.+|||+|||+|..|..+++.+. +.+.|+++|+++..++.+++++++.|..+ +.+
T Consensus 48 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~-------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~ 120 (225)
T 3tr6_A 48 TAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALP-------KDGTLITCDVDEKSTALAKEYWEKAGLSDKIGL 120 (225)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCC-------TTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEE
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCC-------CCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEE
Confidence 3444444555555667888999999999999999998753 36899999999999999999999999875 999
Q ss_pred EecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEE
Q psy17365 240 TNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIA 319 (646)
Q Consensus 240 ~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LV 319 (646)
+++|+........ ..+ ....||.|++|++.. .+..++..+.++|||||+|+
T Consensus 121 ~~~d~~~~~~~~~--~~~--~~~~fD~v~~~~~~~-------------------------~~~~~l~~~~~~L~pgG~lv 171 (225)
T 3tr6_A 121 RLSPAKDTLAELI--HAG--QAWQYDLIYIDADKA-------------------------NTDLYYEESLKLLREGGLIA 171 (225)
T ss_dssp EESCHHHHHHHHH--TTT--CTTCEEEEEECSCGG-------------------------GHHHHHHHHHHHEEEEEEEE
T ss_pred EeCCHHHHHHHhh--hcc--CCCCccEEEECCCHH-------------------------HHHHHHHHHHHhcCCCcEEE
Confidence 9999865421110 000 014799999998611 12357889999999999999
Q ss_pred EEcCCC
Q psy17365 320 YSTCSL 325 (646)
Q Consensus 320 YSTCSl 325 (646)
...+.+
T Consensus 172 ~~~~~~ 177 (225)
T 3tr6_A 172 VDNVLR 177 (225)
T ss_dssp EECSSG
T ss_pred EeCCCc
Confidence 876553
No 79
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.14 E-value=2.9e-10 Score=115.22 Aligned_cols=113 Identities=15% Similarity=0.103 Sum_probs=90.8
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEecCCCCCccccc
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CAIITNHDASVMPNVLY 252 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni~v~~~Da~~~p~~~~ 252 (646)
.+.++.+|||+|||+|..+..+++. +.+.|+++|+++..++.++++++..|+. ++.+...|+..++.
T Consensus 43 ~~~~~~~vLDiGcG~G~~~~~la~~---------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--- 110 (267)
T 3kkz_A 43 NLTEKSLIADIGCGTGGQTMVLAGH---------VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPF--- 110 (267)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHTT---------CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC---
T ss_pred cCCCCCEEEEeCCCCCHHHHHHHhc---------cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCC---
Confidence 4678999999999999999988865 3569999999999999999999999985 49999999987652
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCcc
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPL 328 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ 328 (646)
....||.|++..+.... + ...+|..+.++|||||+++.+++++.+.
T Consensus 111 -------~~~~fD~i~~~~~~~~~-------~----------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 156 (267)
T 3kkz_A 111 -------RNEELDLIWSEGAIYNI-------G----------------FERGLNEWRKYLKKGGYLAVSECSWFTD 156 (267)
T ss_dssp -------CTTCEEEEEESSCGGGT-------C----------------HHHHHHHHGGGEEEEEEEEEEEEEESSS
T ss_pred -------CCCCEEEEEEcCCceec-------C----------------HHHHHHHHHHHcCCCCEEEEEEeeecCC
Confidence 12579999986442111 0 1367999999999999999998875443
No 80
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.14 E-value=4.1e-10 Score=113.13 Aligned_cols=126 Identities=13% Similarity=0.121 Sum_probs=99.8
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC-eEEEecCCCC-Cccccc
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC-AIITNHDASV-MPNVLY 252 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n-i~v~~~Da~~-~p~~~~ 252 (646)
+.+|++|||+|||+|..++.+|... +.+.|+|+|+++..++.+++|++++|+.+ |.+..+|+.. ++.
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~--------~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~--- 81 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERG--------QIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE--- 81 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTT--------SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG---
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc---
Confidence 4688999999999999999998752 57799999999999999999999999975 8999999843 211
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHH
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEA 332 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~ 332 (646)
...||.|++ .|.| ..+-.+||..+...|++||+||.+.- ..+.
T Consensus 82 --------~~~~D~Ivi----aG~G--------------------g~~i~~Il~~~~~~L~~~~~lVlq~~-----~~~~ 124 (225)
T 3kr9_A 82 --------TDQVSVITI----AGMG--------------------GRLIARILEEGLGKLANVERLILQPN-----NRED 124 (225)
T ss_dssp --------GGCCCEEEE----EEEC--------------------HHHHHHHHHHTGGGCTTCCEEEEEES-----SCHH
T ss_pred --------CcCCCEEEE----cCCC--------------------hHHHHHHHHHHHHHhCCCCEEEEECC-----CCHH
Confidence 125998885 2333 12335799999999999999998644 3778
Q ss_pred HHHHHHHHccCcEEEeec
Q psy17365 333 VIQRLIVETQGAVQLVDV 350 (646)
Q Consensus 333 VV~~~L~~~~~~~elv~~ 350 (646)
.|...|.+++ |++++-
T Consensus 125 ~vr~~L~~~G--f~i~~e 140 (225)
T 3kr9_A 125 DLRIWLQDHG--FQIVAE 140 (225)
T ss_dssp HHHHHHHHTT--EEEEEE
T ss_pred HHHHHHHHCC--CEEEEE
Confidence 8888898886 666653
No 81
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.13 E-value=2.2e-10 Score=111.69 Aligned_cols=107 Identities=16% Similarity=0.169 Sum_probs=87.1
Q ss_pred ccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcc
Q psy17365 170 PLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPN 249 (646)
Q Consensus 170 ~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~ 249 (646)
...++++++.+|||+|||+|..+.+++.. .+.|+++|+++..++.+++++++++..++.+..+|+...+.
T Consensus 70 ~~~l~~~~~~~vLdiG~G~G~~~~~la~~----------~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 139 (210)
T 3lbf_A 70 TELLELTPQSRVLEIGTGSGYQTAILAHL----------VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQ 139 (210)
T ss_dssp HHHTTCCTTCEEEEECCTTSHHHHHHHHH----------SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG
T ss_pred HHhcCCCCCCEEEEEcCCCCHHHHHHHHh----------CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCc
Confidence 44567889999999999999999999876 36899999999999999999999999999999999876432
Q ss_pred ccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 250 VLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 250 ~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
. ...||.|+++..+.. -+ ..+.++|||||+|+.+..+
T Consensus 140 ~----------~~~~D~i~~~~~~~~------~~----------------------~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 140 A----------RAPFDAIIVTAAPPE------IP----------------------TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp G----------GCCEEEEEESSBCSS------CC----------------------THHHHTEEEEEEEEEEECS
T ss_pred c----------CCCccEEEEccchhh------hh----------------------HHHHHhcccCcEEEEEEcC
Confidence 1 257999999865321 11 1357899999999988655
No 82
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.13 E-value=1.3e-11 Score=120.85 Aligned_cols=123 Identities=13% Similarity=-0.005 Sum_probs=93.4
Q ss_pred EecccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEE
Q psy17365 161 RQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CAII 239 (646)
Q Consensus 161 ~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni~v 239 (646)
.+.....+...++...++.+|||+|||+|..|..+++.+. +.+.|+++|+++..++.+++++++.+.. ++.+
T Consensus 40 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~-------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~ 112 (210)
T 3c3p_A 40 VDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAIS-------ISSRVVMIDPDRDNVEHARRMLHDNGLIDRVEL 112 (210)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSC-------TTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEE
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCC-------CCCEEEEEECCHHHHHHHHHHHHHCCCCceEEE
Confidence 3434444444444555778999999999999999987652 2689999999999999999999998875 4889
Q ss_pred EecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEE
Q psy17365 240 TNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIA 319 (646)
Q Consensus 240 ~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LV 319 (646)
..+|+..+... ... ||.|++|+++.. +..++..+.++|||||+|+
T Consensus 113 ~~~d~~~~~~~---------~~~-fD~v~~~~~~~~-------------------------~~~~l~~~~~~LkpgG~lv 157 (210)
T 3c3p_A 113 QVGDPLGIAAG---------QRD-IDILFMDCDVFN-------------------------GADVLERMNRCLAKNALLI 157 (210)
T ss_dssp EESCHHHHHTT---------CCS-EEEEEEETTTSC-------------------------HHHHHHHHGGGEEEEEEEE
T ss_pred EEecHHHHhcc---------CCC-CCEEEEcCChhh-------------------------hHHHHHHHHHhcCCCeEEE
Confidence 99998653210 124 999999965211 2367889999999999999
Q ss_pred EEcCCC
Q psy17365 320 YSTCSL 325 (646)
Q Consensus 320 YSTCSl 325 (646)
+.++.+
T Consensus 158 ~~~~~~ 163 (210)
T 3c3p_A 158 AVNALR 163 (210)
T ss_dssp EESSSS
T ss_pred EECccc
Confidence 987654
No 83
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.12 E-value=5.8e-11 Score=120.39 Aligned_cols=128 Identities=16% Similarity=0.214 Sum_probs=95.7
Q ss_pred EEEecccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-Ce
Q psy17365 159 ISRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CA 237 (646)
Q Consensus 159 i~~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni 237 (646)
..++.....+...++...++.+|||+|||+|..|..+|+.+. +.+.|+++|+++.+++.+++++++.|.. ++
T Consensus 61 ~~~~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~-------~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i 133 (247)
T 1sui_A 61 MTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIP-------EDGKILAMDINKENYELGLPVIKKAGVDHKI 133 (247)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSC-------TTCEEEEEESCCHHHHHHHHHHHHTTCGGGE
T ss_pred CCcCHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCC-------CCCEEEEEECCHHHHHHHHHHHHHcCCCCCe
Confidence 334444444545555666778999999999999999998863 3689999999999999999999999984 68
Q ss_pred EEEecCCCCC-ccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCC
Q psy17365 238 IITNHDASVM-PNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGG 316 (646)
Q Consensus 238 ~v~~~Da~~~-p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG 316 (646)
.++.+|+..+ +.... .+ .....||.|++|+++.. ...++..+.++|||||
T Consensus 134 ~~~~gda~~~l~~l~~---~~-~~~~~fD~V~~d~~~~~-------------------------~~~~l~~~~~~LkpGG 184 (247)
T 1sui_A 134 DFREGPALPVLDEMIK---DE-KNHGSYDFIFVDADKDN-------------------------YLNYHKRLIDLVKVGG 184 (247)
T ss_dssp EEEESCHHHHHHHHHH---SG-GGTTCBSEEEECSCSTT-------------------------HHHHHHHHHHHBCTTC
T ss_pred EEEECCHHHHHHHHHh---cc-CCCCCEEEEEEcCchHH-------------------------HHHHHHHHHHhCCCCe
Confidence 9999998654 22110 00 00257999999975211 1367888999999999
Q ss_pred eEEEEc
Q psy17365 317 KIAYST 322 (646)
Q Consensus 317 ~LVYST 322 (646)
+|++..
T Consensus 185 ~lv~d~ 190 (247)
T 1sui_A 185 VIGYDN 190 (247)
T ss_dssp CEEEEC
T ss_pred EEEEec
Confidence 999875
No 84
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.11 E-value=1.2e-10 Score=110.37 Aligned_cols=111 Identities=14% Similarity=0.108 Sum_probs=85.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEecCCCCCcccccc
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CAIITNHDASVMPNVLYT 253 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni~v~~~Da~~~p~~~~~ 253 (646)
..++.+|||+|||+|..+..++.. +.+.|+|+|+++..++.++++++..+.. ++.++++|+..+....
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~---------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-- 97 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR---------GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCL-- 97 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT---------TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHB--
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc---------CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhh--
Confidence 457889999999999999988764 3569999999999999999999999885 7899999987632111
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHH--HhhccCCeEEEEcCCCC
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGV--EMLAVGGKIAYSTCSLN 326 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~--~lLKpGG~LVYSTCSl~ 326 (646)
...||.|++|+|+.. + ....++.... ++|+|||++++++++-.
T Consensus 98 -------~~~fD~i~~~~~~~~-~----------------------~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 98 -------TGRFDLVFLDPPYAK-E----------------------TIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp -------CSCEEEEEECCSSHH-H----------------------HHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred -------cCCCCEEEECCCCCc-c----------------------hHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 146999999998521 1 0123344443 89999999999887754
No 85
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.10 E-value=3.6e-10 Score=106.55 Aligned_cols=127 Identities=18% Similarity=0.147 Sum_probs=98.2
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccc
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~ 251 (646)
.+++.++.+|||+|||+|..+..++. +...|+++|+++..++.++++++..+.+++.+.+.|+.... .
T Consensus 30 ~~~~~~~~~vLdiG~G~G~~~~~l~~----------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~--~ 97 (183)
T 2yxd_A 30 KLNLNKDDVVVDVGCGSGGMTVEIAK----------RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVL--D 97 (183)
T ss_dssp HHCCCTTCEEEEESCCCSHHHHHHHT----------TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHG--G
T ss_pred HcCCCCCCEEEEeCCCCCHHHHHHHh----------cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccc--c
Confidence 34667889999999999999998875 25789999999999999999999999989999999986511 0
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccH
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDE 331 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE 331 (646)
...||.|+++.+ .+ ...++..+.++ |||++++++|+. ++.
T Consensus 98 ---------~~~~D~i~~~~~----------~~----------------~~~~l~~~~~~--~gG~l~~~~~~~---~~~ 137 (183)
T 2yxd_A 98 ---------KLEFNKAFIGGT----------KN----------------IEKIIEILDKK--KINHIVANTIVL---ENA 137 (183)
T ss_dssp ---------GCCCSEEEECSC----------SC----------------HHHHHHHHHHT--TCCEEEEEESCH---HHH
T ss_pred ---------CCCCcEEEECCc----------cc----------------HHHHHHHHhhC--CCCEEEEEeccc---ccH
Confidence 147999999876 01 12567777777 999999998765 344
Q ss_pred HHHHHHHHHccCcEEEeec
Q psy17365 332 AVIQRLIVETQGAVQLVDV 350 (646)
Q Consensus 332 ~VV~~~L~~~~~~~elv~~ 350 (646)
..+...|++++..++.+..
T Consensus 138 ~~~~~~l~~~g~~~~~~~~ 156 (183)
T 2yxd_A 138 AKIINEFESRGYNVDAVNV 156 (183)
T ss_dssp HHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHcCCeEEEEEe
Confidence 4566778888755665543
No 86
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.10 E-value=2.7e-11 Score=122.09 Aligned_cols=135 Identities=13% Similarity=0.138 Sum_probs=98.5
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCC---c
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVM---P 248 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~---p 248 (646)
++...++.+|||+|||+|..|..+|+.+..- . +.+.|+|+|+++..++.++ .+ ..+|.++++|+..+ +
T Consensus 76 ~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~-~---~~~~V~gvD~s~~~l~~a~----~~-~~~v~~~~gD~~~~~~l~ 146 (236)
T 2bm8_A 76 MLWELRPRTIVELGVYNGGSLAWFRDLTKIM-G---IDCQVIGIDRDLSRCQIPA----SD-MENITLHQGDCSDLTTFE 146 (236)
T ss_dssp HHHHHCCSEEEEECCTTSHHHHHHHHHHHHT-T---CCCEEEEEESCCTTCCCCG----GG-CTTEEEEECCSSCSGGGG
T ss_pred HHHhcCCCEEEEEeCCCCHHHHHHHHhhhhc-C---CCCEEEEEeCChHHHHHHh----cc-CCceEEEECcchhHHHHH
Confidence 3444567899999999999999999873100 0 5789999999999876654 22 26799999999874 2
Q ss_pred cccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHH-hhccCCeEEEEc-CCCC
Q psy17365 249 NVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVE-MLAVGGKIAYST-CSLN 326 (646)
Q Consensus 249 ~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~-lLKpGG~LVYST-CSl~ 326 (646)
.. ....||.|++|+.- .+ ...+|..+.+ +|||||+||++. |.+.
T Consensus 147 ~~---------~~~~fD~I~~d~~~---------~~----------------~~~~l~~~~r~~LkpGG~lv~~d~~~~~ 192 (236)
T 2bm8_A 147 HL---------REMAHPLIFIDNAH---------AN----------------TFNIMKWAVDHLLEEGDYFIIEDMIPYW 192 (236)
T ss_dssp GG---------SSSCSSEEEEESSC---------SS----------------HHHHHHHHHHHTCCTTCEEEECSCHHHH
T ss_pred hh---------ccCCCCEEEECCch---------Hh----------------HHHHHHHHHHhhCCCCCEEEEEeCcccc
Confidence 11 01369999998641 11 1357888886 999999999864 3455
Q ss_pred ccccHHHHHHHHHHccCcEEEee
Q psy17365 327 PLEDEAVIQRLIVETQGAVQLVD 349 (646)
Q Consensus 327 p~ENE~VV~~~L~~~~~~~elv~ 349 (646)
+..+.+.+.+++++++..|+++.
T Consensus 193 ~~~~~~~~~~~l~~~~~~f~~~~ 215 (236)
T 2bm8_A 193 YRYAPQLFSEYLGAFRDVLSMDM 215 (236)
T ss_dssp HHHCHHHHHHHHHTTTTTEEEET
T ss_pred cccCHHHHHHHHHhCcccEEEcc
Confidence 56677789999998875677754
No 87
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.10 E-value=4.4e-11 Score=124.85 Aligned_cols=136 Identities=16% Similarity=0.136 Sum_probs=92.5
Q ss_pred EEecccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEE
Q psy17365 160 SRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAII 239 (646)
Q Consensus 160 ~~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v 239 (646)
..+.......+..+++.++++|||+|||+|..|..+++. .+.|+|+|+|+..+..++++++..+.+++.+
T Consensus 25 l~~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~----------~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~ 94 (299)
T 2h1r_A 25 LKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL----------AKKVITIDIDSRMISEVKKRCLYEGYNNLEV 94 (299)
T ss_dssp ECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT----------SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC
T ss_pred ecCHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc----------CCEEEEEECCHHHHHHHHHHHHHcCCCceEE
Confidence 334433444445677889999999999999999988753 4589999999999999999998888889999
Q ss_pred EecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccC--CcchhhhhHHHHHHHHHHHHHhhccCCe
Q psy17365 240 TNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKW--TPSNGNNLHGIQYRIVKRGVEMLAVGGK 317 (646)
Q Consensus 240 ~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w--~~~~~~~l~~lQ~~IL~~A~~lLKpGG~ 317 (646)
+++|+..++. ..||.|++|+|+....- .+..-. ...-.....-.|. ..|.++++++|.
T Consensus 95 ~~~D~~~~~~------------~~~D~Vv~n~py~~~~~-----~~~~ll~~~~~~~~~~l~~Q~---e~a~rlla~~G~ 154 (299)
T 2h1r_A 95 YEGDAIKTVF------------PKFDVCTANIPYKISSP-----LIFKLISHRPLFKCAVLMFQK---EFAERMLANVGD 154 (299)
T ss_dssp ----CCSSCC------------CCCSEEEEECCGGGHHH-----HHHHHHHCSSCCSEEEEEEEH---HHHHHHTCCTTS
T ss_pred EECchhhCCc------------ccCCEEEEcCCcccccH-----HHHHHHhcCCccceeeehHHH---HHHHHHhcCCCC
Confidence 9999977541 36999999999775431 110000 0000000001121 457789999999
Q ss_pred EEEEcCCC
Q psy17365 318 IAYSTCSL 325 (646)
Q Consensus 318 LVYSTCSl 325 (646)
..|+|||.
T Consensus 155 ~~y~~ls~ 162 (299)
T 2h1r_A 155 SNYSRLTI 162 (299)
T ss_dssp TTCCHHHH
T ss_pred cchhHHHH
Confidence 99998876
No 88
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.10 E-value=4.6e-10 Score=111.70 Aligned_cols=110 Identities=24% Similarity=0.318 Sum_probs=86.3
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~ 252 (646)
++++++.+|||+|||+|..+.++++..+ +.+.|+|+|+++..+..+.+++++. .++.++++|+........
T Consensus 73 ~~~~~~~~vLDlG~G~G~~~~~la~~~g-------~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~~~~~~~~~ 143 (233)
T 2ipx_A 73 IHIKPGAKVLYLGAASGTTVSHVSDIVG-------PDGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIEDARHPHKYRM 143 (233)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHC-------TTCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSCTTCGGGGGG
T ss_pred ecCCCCCEEEEEcccCCHHHHHHHHHhC-------CCcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEcccCChhhhcc
Confidence 4678899999999999999999998864 4689999999999888888888775 689999999976421110
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
....||.|++|+| .|+. ...++.++.++|||||+++.++
T Consensus 144 -------~~~~~D~V~~~~~---------~~~~---------------~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 144 -------LIAMVDVIFADVA---------QPDQ---------------TRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp -------GCCCEEEEEECCC---------CTTH---------------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred -------cCCcEEEEEEcCC---------CccH---------------HHHHHHHHHHHcCCCeEEEEEE
Confidence 1247999999987 1221 1346788999999999999853
No 89
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.10 E-value=3.9e-10 Score=112.95 Aligned_cols=112 Identities=14% Similarity=0.067 Sum_probs=89.1
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEecCCCCCccc
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CAIITNHDASVMPNV 250 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni~v~~~Da~~~p~~ 250 (646)
.+.+.++.+|||+|||+|..+..++... ...|+++|+++..++.++++++..|.. ++.+..+|+..++.
T Consensus 31 ~~~~~~~~~VLDiGcG~G~~~~~la~~~---------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~- 100 (256)
T 1nkv_A 31 VLRMKPGTRILDLGSGSGEMLCTWARDH---------GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA- 100 (256)
T ss_dssp HTCCCTTCEEEEETCTTCHHHHHHHHHT---------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-
T ss_pred hcCCCCCCEEEEECCCCCHHHHHHHHhc---------CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-
Confidence 3567899999999999999999998874 348999999999999999999998885 79999999987642
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
...||.|++- +++..-++ ...+|.++.++|||||+|+.++...
T Consensus 101 ----------~~~fD~V~~~------~~~~~~~~----------------~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (256)
T 1nkv_A 101 ----------NEKCDVAACV------GATWIAGG----------------FAGAEELLAQSLKPGGIMLIGEPYW 143 (256)
T ss_dssp ----------SSCEEEEEEE------SCGGGTSS----------------SHHHHHHHTTSEEEEEEEEEEEEEE
T ss_pred ----------CCCCCEEEEC------CChHhcCC----------------HHHHHHHHHHHcCCCeEEEEecCcc
Confidence 2579999972 22222222 1367999999999999999886543
No 90
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.09 E-value=9.6e-10 Score=109.43 Aligned_cols=108 Identities=19% Similarity=0.201 Sum_probs=84.2
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~ 252 (646)
+++.++.+|||+|||+|..+.++++.. +.+.|+|+|+++..++.++++++.. .|+.++.+|+........
T Consensus 70 ~~~~~~~~VLDlGcG~G~~~~~la~~~--------~~~~v~gvD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~~~~ 139 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAGTTPSHVADIA--------DKGIVYAIEYAPRIMRELLDACAER--ENIIPILGDANKPQEYAN 139 (230)
T ss_dssp CCCCTTCEEEEESCCSSHHHHHHHHHT--------TTSEEEEEESCHHHHHHHHHHTTTC--TTEEEEECCTTCGGGGTT
T ss_pred cCCCCCCEEEEEcccCCHHHHHHHHHc--------CCcEEEEEECCHHHHHHHHHHhhcC--CCeEEEECCCCCcccccc
Confidence 456789999999999999999999875 3679999999999999999987765 789999999876211000
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
. ...||.|++|+| .|+ ....+|..+.++|||||+++.+
T Consensus 140 ------~-~~~~D~v~~~~~---------~~~---------------~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 140 ------I-VEKVDVIYEDVA---------QPN---------------QAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp ------T-SCCEEEEEECCC---------STT---------------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------c-CccEEEEEEecC---------Chh---------------HHHHHHHHHHHhCCCCcEEEEE
Confidence 0 146999998765 121 1135689999999999999886
No 91
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.09 E-value=3.6e-10 Score=119.08 Aligned_cols=110 Identities=17% Similarity=0.199 Sum_probs=86.3
Q ss_pred ccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcC-----------CCCeE
Q psy17365 170 PLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLN-----------SPCAI 238 (646)
Q Consensus 170 ~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg-----------~~ni~ 238 (646)
...+++.+|.+|||+|||+|..|..++..++ +.+.|+|+|+++.+++.+++|+.+++ ..++.
T Consensus 98 l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g-------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~ 170 (336)
T 2b25_A 98 LSMMDINPGDTVLEAGSGSGGMSLFLSKAVG-------SQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVD 170 (336)
T ss_dssp HHHHTCCTTCEEEEECCTTSHHHHHHHHHHC-------TTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEE
T ss_pred HHhcCCCCCCEEEEeCCCcCHHHHHHHHHhC-------CCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceE
Confidence 3456889999999999999999999998764 46899999999999999999998754 36799
Q ss_pred EEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeE
Q psy17365 239 ITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKI 318 (646)
Q Consensus 239 v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~L 318 (646)
+..+|+....... ....||.|++|+|. |. .++..+.++|||||+|
T Consensus 171 ~~~~d~~~~~~~~--------~~~~fD~V~~~~~~---------~~------------------~~l~~~~~~LkpgG~l 215 (336)
T 2b25_A 171 FIHKDISGATEDI--------KSLTFDAVALDMLN---------PH------------------VTLPVFYPHLKHGGVC 215 (336)
T ss_dssp EEESCTTCCC---------------EEEEEECSSS---------TT------------------TTHHHHGGGEEEEEEE
T ss_pred EEECChHHccccc--------CCCCeeEEEECCCC---------HH------------------HHHHHHHHhcCCCcEE
Confidence 9999987653110 12469999998762 21 1578899999999999
Q ss_pred EEE
Q psy17365 319 AYS 321 (646)
Q Consensus 319 VYS 321 (646)
+..
T Consensus 216 v~~ 218 (336)
T 2b25_A 216 AVY 218 (336)
T ss_dssp EEE
T ss_pred EEE
Confidence 854
No 92
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.09 E-value=3.3e-10 Score=118.75 Aligned_cols=108 Identities=17% Similarity=0.214 Sum_probs=88.3
Q ss_pred ccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcc
Q psy17365 170 PLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPN 249 (646)
Q Consensus 170 ~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~ 249 (646)
...+++++|++|||+|||+|..+..+++... ..+.|+++|+++..++.++++++..|..++.+..+|+...+.
T Consensus 68 ~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~-------~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~ 140 (317)
T 1dl5_A 68 MEWVGLDKGMRVLEIGGGTGYNAAVMSRVVG-------EKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVP 140 (317)
T ss_dssp HHHTTCCTTCEEEEECCTTSHHHHHHHHHHC-------TTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG
T ss_pred HHhcCCCCcCEEEEecCCchHHHHHHHHhcC-------CCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccc
Confidence 3456788999999999999999999998752 247899999999999999999999999999999999876432
Q ss_pred ccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 250 VLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 250 ~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
. ...||+|+++.++...+ ..+.++|||||+|+.+.
T Consensus 141 ~----------~~~fD~Iv~~~~~~~~~----------------------------~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 141 E----------FSPYDVIFVTVGVDEVP----------------------------ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp G----------GCCEEEEEECSBBSCCC----------------------------HHHHHHEEEEEEEEEEB
T ss_pred c----------CCCeEEEEEcCCHHHHH----------------------------HHHHHhcCCCcEEEEEE
Confidence 1 24699999998754321 24567899999999874
No 93
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.08 E-value=3.8e-10 Score=121.58 Aligned_cols=127 Identities=13% Similarity=0.149 Sum_probs=94.9
Q ss_pred ccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC---CeEEEec
Q psy17365 166 SMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP---CAIITNH 242 (646)
Q Consensus 166 Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~---ni~v~~~ 242 (646)
+.+....+...++.+|||+|||+|..+..++... +...|+++|+|+..++.+++|++.+|+. ++.+...
T Consensus 211 ~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~--------p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~ 282 (375)
T 4dcm_A 211 ARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKN--------PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMIN 282 (375)
T ss_dssp HHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHC--------TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEEC
T ss_pred HHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHC--------CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEec
Confidence 3344455667778999999999999999999873 4679999999999999999999999875 4777888
Q ss_pred CCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 243 DASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 243 Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
|+.... ....||.|++|+|......+. . ....+++..+.++|||||+|+.++
T Consensus 283 D~~~~~-----------~~~~fD~Ii~nppfh~~~~~~-----------~------~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 283 NALSGV-----------EPFRFNAVLCNPPFHQQHALT-----------D------NVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp STTTTC-----------CTTCEEEEEECCCC------------------C------CHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhccC-----------CCCCeeEEEECCCcccCcccC-----------H------HHHHHHHHHHHHhCCCCcEEEEEE
Confidence 886521 125799999999964321110 0 112368999999999999999886
Q ss_pred CCCCcc
Q psy17365 323 CSLNPL 328 (646)
Q Consensus 323 CSl~p~ 328 (646)
.+..+.
T Consensus 335 n~~~~~ 340 (375)
T 4dcm_A 335 NRHLDY 340 (375)
T ss_dssp ETTSCH
T ss_pred ECCcCH
Confidence 555443
No 94
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.08 E-value=1.1e-09 Score=110.24 Aligned_cols=127 Identities=11% Similarity=0.126 Sum_probs=100.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC-eEEEecCCCCCcccccc
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC-AIITNHDASVMPNVLYT 253 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n-i~v~~~Da~~~p~~~~~ 253 (646)
+.+|++|||+|||+|..++.++... +.+.|+|+|+++..++.+++|++++|+.+ |.+..+|+.....
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~--------~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~---- 86 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMG--------YCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFE---- 86 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTT--------CEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC----
T ss_pred CCCCCEEEEECCchHHHHHHHHHhC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccc----
Confidence 5688999999999999999988752 46799999999999999999999999875 9999999865431
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHH
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAV 333 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~V 333 (646)
....||.|++ .|.| ..+-.+||..+...|+++|+||.|.- .++..
T Consensus 87 ------~~~~~D~Ivi----aGmG--------------------g~lI~~IL~~~~~~l~~~~~lIlqp~-----~~~~~ 131 (230)
T 3lec_A 87 ------EADNIDTITI----CGMG--------------------GRLIADILNNDIDKLQHVKTLVLQPN-----NREDD 131 (230)
T ss_dssp ------GGGCCCEEEE----EEEC--------------------HHHHHHHHHHTGGGGTTCCEEEEEES-----SCHHH
T ss_pred ------cccccCEEEE----eCCc--------------------hHHHHHHHHHHHHHhCcCCEEEEECC-----CChHH
Confidence 1126998875 2333 23345789999999999999998752 46888
Q ss_pred HHHHHHHccCcEEEeec
Q psy17365 334 IQRLIVETQGAVQLVDV 350 (646)
Q Consensus 334 V~~~L~~~~~~~elv~~ 350 (646)
|.+.|.+++ |++++-
T Consensus 132 lr~~L~~~G--f~i~~E 146 (230)
T 3lec_A 132 LRKWLAAND--FEIVAE 146 (230)
T ss_dssp HHHHHHHTT--EEEEEE
T ss_pred HHHHHHHCC--CEEEEE
Confidence 888898886 666653
No 95
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.07 E-value=4.2e-10 Score=120.89 Aligned_cols=133 Identities=13% Similarity=0.112 Sum_probs=102.1
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEecCCCCCcccccc
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS-PCAIITNHDASVMPNVLYT 253 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~-~ni~v~~~Da~~~p~~~~~ 253 (646)
+.++.+|||+|||+|+.+..+|... ..+.|+|+|+|+..++.++.|+++.|+ .++.+.++|+..++..
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~--------~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~--- 283 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRR--------YSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQY--- 283 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTT--------CCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGT---
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhC--------CCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcc---
Confidence 6889999999999999999988753 356899999999999999999999998 6799999999886521
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHH
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAV 333 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~V 333 (646)
...||.|++|||+.- + ......+..++.+++..+.++| ||.++|.|| +...
T Consensus 284 -------~~~fD~Ii~npPyg~------------r--~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~------~~~~ 334 (373)
T 3tm4_A 284 -------VDSVDFAISNLPYGL------------K--IGKKSMIPDLYMKFFNELAKVL--EKRGVFITT------EKKA 334 (373)
T ss_dssp -------CSCEEEEEEECCCC--------------------CCHHHHHHHHHHHHHHHE--EEEEEEEES------CHHH
T ss_pred -------cCCcCEEEECCCCCc------------c--cCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC------CHHH
Confidence 247999999999532 0 1112245667788999999988 788888887 3445
Q ss_pred HHHHHHHccCcEEEee
Q psy17365 334 IQRLIVETQGAVQLVD 349 (646)
Q Consensus 334 V~~~L~~~~~~~elv~ 349 (646)
+...+.+.+ +++..
T Consensus 335 ~~~~~~~~G--~~~~~ 348 (373)
T 3tm4_A 335 IEEAIAENG--FEIIH 348 (373)
T ss_dssp HHHHHHHTT--EEEEE
T ss_pred HHHHHHHcC--CEEEE
Confidence 556676654 55543
No 96
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.06 E-value=2.8e-10 Score=114.68 Aligned_cols=126 Identities=17% Similarity=0.094 Sum_probs=90.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHc---CCCC----------------
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRL---NSPC---------------- 236 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rl---g~~n---------------- 236 (646)
.++.+|||+|||+|..+..++..+.. +...|+|+|+|+..++.++.|+.+. ++.+
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~------~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRR------SLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPS 123 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGG------GEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhcc------CCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhccccc
Confidence 46779999999999999999887310 3568999999999999999998876 5432
Q ss_pred ----------eE-------------EEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcch
Q psy17365 237 ----------AI-------------ITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSN 293 (646)
Q Consensus 237 ----------i~-------------v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~ 293 (646)
+. +.++|+........ . .....||.|++++|+..... |..
T Consensus 124 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~--~---~~~~~fD~Iv~npp~~~~~~----------~~~-- 186 (250)
T 1o9g_A 124 YLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSA--V---LAGSAPDVVLTDLPYGERTH----------WEG-- 186 (250)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHH--H---HTTCCCSEEEEECCGGGSSS----------SSS--
T ss_pred chhhhhhhhhhhhhccccccccccceeeccccccccccc--c---cCCCCceEEEeCCCeecccc----------ccc--
Confidence 55 88888765321000 0 01137999999999754432 111
Q ss_pred hhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 294 GNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 294 ~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
......+..++.++.++|||||+|+++.++.
T Consensus 187 -~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 217 (250)
T 1o9g_A 187 -QVPGQPVAGLLRSLASALPAHAVIAVTDRSR 217 (250)
T ss_dssp -CCCHHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred -cccccHHHHHHHHHHHhcCCCcEEEEeCcch
Confidence 1234566789999999999999999866553
No 97
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.06 E-value=1.9e-09 Score=111.37 Aligned_cols=120 Identities=13% Similarity=0.094 Sum_probs=92.9
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEecCCCCCccc
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CAIITNHDASVMPNV 250 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni~v~~~Da~~~p~~ 250 (646)
.+++++|.+|||+|||+|..+..+++.. + ..|+++|+++..++.+++++...|+. ++.+..+|+..+
T Consensus 67 ~~~~~~~~~vLDiGcG~G~~~~~la~~~--------~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--- 134 (302)
T 3hem_A 67 KLNLEPGMTLLDIGCGWGSTMRHAVAEY--------D-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF--- 134 (302)
T ss_dssp TTCCCTTCEEEEETCTTSHHHHHHHHHH--------C-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---
T ss_pred HcCCCCcCEEEEeeccCcHHHHHHHHhC--------C-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---
Confidence 4567899999999999999999999875 2 68999999999999999999999987 799999998764
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCC
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLN 326 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~ 326 (646)
...||.|++. +++..-|+.. ... -......+|..+.++|||||+++.++.+..
T Consensus 135 ----------~~~fD~v~~~------~~~~~~~d~~---~~~----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 135 ----------DEPVDRIVSL------GAFEHFADGA---GDA----GFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp ----------CCCCSEEEEE------SCGGGTTCCS---SCC----CTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred ----------CCCccEEEEc------chHHhcCccc---ccc----chhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 1579999975 2333333210 000 002234789999999999999999887654
No 98
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.05 E-value=1.5e-09 Score=110.35 Aligned_cols=126 Identities=10% Similarity=0.088 Sum_probs=99.7
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC-eEEEecCCCCCcccccc
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC-AIITNHDASVMPNVLYT 253 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n-i~v~~~Da~~~p~~~~~ 253 (646)
+.+|.+|||+|||+|..++.+|... +.+.|+|+|+++..++.+++|++++|+.+ |.+..+|+.....
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~--------~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~---- 86 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQ--------TASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIE---- 86 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTT--------SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC----
T ss_pred CCCCCEEEEECCccHHHHHHHHHhC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccC----
Confidence 4678999999999999999988752 46799999999999999999999999975 8999999865321
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHH
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAV 333 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~V 333 (646)
....||.|++ .|.| ..+-.+||..+...|+++|+||.+. ...+..
T Consensus 87 ------~~~~~D~Ivi----agmG--------------------g~lI~~IL~~~~~~L~~~~~lIlq~-----~~~~~~ 131 (244)
T 3gnl_A 87 ------KKDAIDTIVI----AGMG--------------------GTLIRTILEEGAAKLAGVTKLILQP-----NIAAWQ 131 (244)
T ss_dssp ------GGGCCCEEEE----EEEC--------------------HHHHHHHHHHTGGGGTTCCEEEEEE-----SSCHHH
T ss_pred ------ccccccEEEE----eCCc--------------------hHHHHHHHHHHHHHhCCCCEEEEEc-----CCChHH
Confidence 0125999885 2333 1334579999999999999999874 247788
Q ss_pred HHHHHHHccCcEEEee
Q psy17365 334 IQRLIVETQGAVQLVD 349 (646)
Q Consensus 334 V~~~L~~~~~~~elv~ 349 (646)
|.+.|.+++ |.+++
T Consensus 132 lr~~L~~~G--f~i~~ 145 (244)
T 3gnl_A 132 LREWSEQNN--WLITS 145 (244)
T ss_dssp HHHHHHHHT--EEEEE
T ss_pred HHHHHHHCC--CEEEE
Confidence 888898886 56554
No 99
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.05 E-value=5.4e-10 Score=107.39 Aligned_cols=140 Identities=19% Similarity=0.210 Sum_probs=87.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcC-CCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEE-ecCCCCCccccc
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAAD-SNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIIT-NHDASVMPNVLY 252 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~-~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~-~~Da~~~p~~~~ 252 (646)
++++.+|||+|||+|..+.++++.++... +...+.+.|+|+|+++.+ ...++.++ .+|+........
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCTTSHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccCCCHHHHHH
Confidence 46789999999999999999998864100 000012799999999842 34567888 888765321000
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHH
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEA 332 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~ 332 (646)
. .. ......||.|++|.++...|.. . .+......++..++..+.++|||||+++.+++.- . +..
T Consensus 89 ~-~~-~~~~~~fD~V~~~~~~~~~~~~----------~-~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~--~-~~~ 152 (196)
T 2nyu_A 89 I-LE-VLPGRRADVILSDMAPNATGFR----------D-LDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG--S-QSR 152 (196)
T ss_dssp H-HH-HSGGGCEEEEEECCCCCCCSCH----------H-HHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS--G-GGH
T ss_pred H-HH-hcCCCCCcEEEeCCCCCCCCCc----------c-cCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC--c-cHH
Confidence 0 00 0001469999999865544421 1 1112233456789999999999999999876533 3 333
Q ss_pred HHHHHHHHc
Q psy17365 333 VIQRLIVET 341 (646)
Q Consensus 333 VV~~~L~~~ 341 (646)
.+...+..+
T Consensus 153 ~~~~~l~~~ 161 (196)
T 2nyu_A 153 RLQRRLTEE 161 (196)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444555543
No 100
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.05 E-value=3.1e-09 Score=106.91 Aligned_cols=150 Identities=10% Similarity=0.093 Sum_probs=97.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC-eEEEecCCCC-Ccccccc
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC-AIITNHDASV-MPNVLYT 253 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n-i~v~~~Da~~-~p~~~~~ 253 (646)
.++.+|||+|||+|..+..++.... .+.|+|+|+++..++.+++|++..++.+ +.++++|+.. +....
T Consensus 64 ~~~~~vLDlG~G~G~~~~~la~~~~--------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-- 133 (254)
T 2h00_A 64 STLRRGIDIGTGASCIYPLLGATLN--------GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDAL-- 133 (254)
T ss_dssp CCCCEEEEESCTTTTHHHHHHHHHH--------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTS--
T ss_pred CCCCEEEEeCCChhHHHHHHHHhCC--------CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhh--
Confidence 3678999999999999999988753 5799999999999999999999999875 9999999865 21110
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCc-cccc--CccccccCCc-----chh------hhhHHHHHHHHHHHHHhhccCCeEE
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDG-TMRK--NPDIWTKWTP-----SNG------NNLHGIQYRIVKRGVEMLAVGGKIA 319 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G-~lrk--~pd~~~~w~~-----~~~------~~l~~lQ~~IL~~A~~lLKpGG~LV 319 (646)
.. .....||.|++|+|+...+ .+.. .+++ ..+.+ ... .+...+...++..+..+++++|.++
T Consensus 134 -~~--~~~~~fD~i~~npp~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g~~~ 209 (254)
T 2h00_A 134 -KE--ESEIIYDFCMCNPPFFANQLEAKGVNSRNP-RRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYS 209 (254)
T ss_dssp -TT--CCSCCBSEEEECCCCC--------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGBSCEE
T ss_pred -hc--ccCCcccEEEECCCCccCcchhcccccccc-cccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccceEEEE
Confidence 00 0014799999999998765 1110 0111 00000 000 0112333457778888999999765
Q ss_pred EEcCCCCccccHHHHHHHHHHcc
Q psy17365 320 YSTCSLNPLEDEAVIQRLIVETQ 342 (646)
Q Consensus 320 YSTCSl~p~ENE~VV~~~L~~~~ 342 (646)
. .+....+...+.++|++.+
T Consensus 210 ~---~~~~~~~~~~~~~~l~~~G 229 (254)
T 2h00_A 210 C---MLGKKCSLAPLKEELRIQG 229 (254)
T ss_dssp E---EESSTTSHHHHHHHHHHTT
T ss_pred E---CCCChhHHHHHHHHHHHcC
Confidence 3 3344455456777788775
No 101
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.04 E-value=3.3e-10 Score=105.93 Aligned_cols=111 Identities=14% Similarity=0.049 Sum_probs=83.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
++.+|||+|||+|..+..++... . .|+++|+++..++.++++++..+. ++.+++.|+..+.....
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~---------~-~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~---- 105 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG---------W-EAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLPEAK---- 105 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT---------C-EEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHHHHH----
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC---------C-eEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHHhhh----
Confidence 78899999999999999988752 2 299999999999999999999888 89999999876321110
Q ss_pred CCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHH--HHhhccCCeEEEEcCCCCcc
Q psy17365 257 GNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRG--VEMLAVGGKIAYSTCSLNPL 328 (646)
Q Consensus 257 g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A--~~lLKpGG~LVYSTCSl~p~ 328 (646)
.....||.|++|+|.. +. .+ +++... .++|||||+++.++++....
T Consensus 106 --~~~~~~D~i~~~~~~~--~~---~~-------------------~~~~~~~~~~~L~~gG~~~~~~~~~~~~ 153 (171)
T 1ws6_A 106 --AQGERFTVAFMAPPYA--MD---LA-------------------ALFGELLASGLVEAGGLYVLQHPKDLYL 153 (171)
T ss_dssp --HTTCCEEEEEECCCTT--SC---TT-------------------HHHHHHHHHTCEEEEEEEEEEEETTSCC
T ss_pred --ccCCceEEEEECCCCc--hh---HH-------------------HHHHHHHhhcccCCCcEEEEEeCCccCC
Confidence 0013699999999965 21 01 123333 48999999999988776444
No 102
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.04 E-value=1.2e-09 Score=110.07 Aligned_cols=112 Identities=18% Similarity=0.226 Sum_probs=87.4
Q ss_pred ccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcc
Q psy17365 170 PLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPN 249 (646)
Q Consensus 170 ~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~ 249 (646)
...+.+.++.+|||+|||+|..+..+++. .+.|+++|+++..++.++++++..+.+++.+..+|+..++.
T Consensus 30 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~----------~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~ 99 (260)
T 1vl5_A 30 MQIAALKGNEEVLDVATGGGHVANAFAPF----------VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPF 99 (260)
T ss_dssp HHHHTCCSCCEEEEETCTTCHHHHHHGGG----------SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCS
T ss_pred HHHhCCCCCCEEEEEeCCCCHHHHHHHHh----------CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCC
Confidence 34456789999999999999999888764 24899999999999999999999998899999999987652
Q ss_pred ccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcC
Q psy17365 250 VLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTC 323 (646)
Q Consensus 250 ~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTC 323 (646)
....||.|++... +..-++ ...+|.++.++|||||+|+.++.
T Consensus 100 ----------~~~~fD~V~~~~~------l~~~~d----------------~~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 100 ----------TDERFHIVTCRIA------AHHFPN----------------PASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp ----------CTTCEEEEEEESC------GGGCSC----------------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ----------CCCCEEEEEEhhh------hHhcCC----------------HHHHHHHHHHHcCCCCEEEEEEc
Confidence 1257999997521 111121 13689999999999999998643
No 103
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.04 E-value=4.1e-10 Score=123.74 Aligned_cols=170 Identities=12% Similarity=0.051 Sum_probs=114.9
Q ss_pred cccEEEecccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCC-----CCCcEEEEEcCCHHHHHHHHHHHH
Q psy17365 156 TGHISRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNP-----VPSGLVVANDVDNNRCYMLVHQAK 230 (646)
Q Consensus 156 ~G~i~~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~-----~~~G~VvA~Dis~~Rl~~L~~n~~ 230 (646)
.|.++--...+.+.+.++++.++.+|||.|||+|+...++++.+....... .....++|+|+++..+.+++.|+.
T Consensus 150 ~G~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~ 229 (445)
T 2okc_A 150 AGQYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY 229 (445)
T ss_dssp CGGGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred CCcccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH
Confidence 565554444454556677889999999999999999999998763110000 013579999999999999999998
Q ss_pred HcCCC--CeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHH
Q psy17365 231 RLNSP--CAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRG 308 (646)
Q Consensus 231 rlg~~--ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A 308 (646)
..|.. ++.+.++|+...+. ...||.|+++||+++........ ....+.. .....+...+.++
T Consensus 230 l~g~~~~~~~i~~gD~l~~~~-----------~~~fD~Iv~NPPf~~~~~~~~~~-~~~~~~~----~~~~~~~~fl~~~ 293 (445)
T 2okc_A 230 LHGIGTDRSPIVCEDSLEKEP-----------STLVDVILANPPFGTRPAGSVDI-NRPDFYV----ETKNNQLNFLQHM 293 (445)
T ss_dssp HTTCCSSCCSEEECCTTTSCC-----------SSCEEEEEECCCSSCCCTTCCCC-CCTTSSS----CCSCHHHHHHHHH
T ss_pred HhCCCcCCCCEeeCCCCCCcc-----------cCCcCEEEECCCCCCcccccchh-hHhhcCC----CCcchHHHHHHHH
Confidence 88875 67788999765431 13799999999999865432110 0000000 1122466889999
Q ss_pred HHhhccCCeEEEEcCC--CCccccHHHHHH-HHHHc
Q psy17365 309 VEMLAVGGKIAYSTCS--LNPLEDEAVIQR-LIVET 341 (646)
Q Consensus 309 ~~lLKpGG~LVYSTCS--l~p~ENE~VV~~-~L~~~ 341 (646)
+++|||||++++.++. +.....+..+.+ +++++
T Consensus 294 ~~~Lk~gG~~a~V~p~~~L~~~~~~~~iR~~L~~~~ 329 (445)
T 2okc_A 294 MLMLKTGGRAAVVLPDNVLFEAGAGETIRKRLLQDF 329 (445)
T ss_dssp HHHEEEEEEEEEEEEHHHHHCSTHHHHHHHHHHHHE
T ss_pred HHHhccCCEEEEEECCcccccCcHHHHHHHHHHhcC
Confidence 9999999999988764 333333444554 55554
No 104
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.04 E-value=2e-10 Score=109.24 Aligned_cols=114 Identities=13% Similarity=0.118 Sum_probs=84.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEecCCCCCccccccC
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS-PCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~-~ni~v~~~Da~~~p~~~~~~ 254 (646)
.++.+|||+|||+|..+..++.. +...|+++|+++..++.+++|++..+. +++.++++|+..+.....
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~---------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~-- 111 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSR---------GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFY-- 111 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHT---------TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHH--
T ss_pred cCCCCEEEeCCccCHHHHHHHHc---------CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHH--
Confidence 57889999999999999988763 357999999999999999999999987 479999999876421100
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHH--HHHhhccCCeEEEEcCCCCc
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKR--GVEMLAVGGKIAYSTCSLNP 327 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~--A~~lLKpGG~LVYSTCSl~p 327 (646)
.....||.|++|+|.. .+. . ...+.. +.++|+|||++++++|+-..
T Consensus 112 ----~~~~~fD~i~~~~~~~-~~~----~------------------~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 112 ----EEKLQFDLVLLDPPYA-KQE----I------------------VSQLEKMLERQLLTNEAVIVCETDKTVK 159 (187)
T ss_dssp ----HTTCCEEEEEECCCGG-GCC----H------------------HHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred ----hcCCCCCEEEECCCCC-chh----H------------------HHHHHHHHHhcccCCCCEEEEEeCCccc
Confidence 0024799999998832 110 0 011222 37889999999999887644
No 105
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.03 E-value=1.9e-09 Score=118.15 Aligned_cols=88 Identities=20% Similarity=0.126 Sum_probs=72.5
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~ 252 (646)
+++.++.+|||+|||+|..|..+|.. .+.|+|+|+++..++.+++|++.+|+.|+.+.++|+........
T Consensus 282 l~~~~~~~VLDlgcG~G~~~~~la~~----------~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~ 351 (433)
T 1uwv_A 282 LDVQPEDRVLDLFCGMGNFTLPLATQ----------AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQP 351 (433)
T ss_dssp HTCCTTCEEEEESCTTTTTHHHHHTT----------SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSG
T ss_pred hcCCCCCEEEECCCCCCHHHHHHHhh----------CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhh
Confidence 45678899999999999999998854 46899999999999999999999999999999999976321100
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCC
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGD 276 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~ 276 (646)
.....||.|++|||++|.
T Consensus 352 ------~~~~~fD~Vv~dPPr~g~ 369 (433)
T 1uwv_A 352 ------WAKNGFDKVLLDPARAGA 369 (433)
T ss_dssp ------GGTTCCSEEEECCCTTCC
T ss_pred ------hhcCCCCEEEECCCCccH
Confidence 012469999999998764
No 106
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.03 E-value=1.7e-09 Score=105.99 Aligned_cols=113 Identities=10% Similarity=-0.015 Sum_probs=85.3
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-----CeEEEecCCCCCc
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-----CAIITNHDASVMP 248 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-----ni~v~~~Da~~~p 248 (646)
...++.+|||+|||+|..+..+++.. +...|+++|+++..++.+++++...+.. ++.+..+|+...+
T Consensus 26 ~~~~~~~vLDiGcG~G~~~~~l~~~~--------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 97 (217)
T 3jwh_A 26 KQSNARRVIDLGCGQGNLLKILLKDS--------FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQD 97 (217)
T ss_dssp HHTTCCEEEEETCTTCHHHHHHHHCT--------TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCC
T ss_pred HhcCCCEEEEeCCCCCHHHHHHHhhC--------CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccc
Confidence 44678899999999999999988753 3569999999999999999999887776 7999999985443
Q ss_pred cccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 249 NVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 249 ~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
. ....||.|++... +..-++ .....+|+.+.++|||||.++.+.+.
T Consensus 98 ~----------~~~~fD~v~~~~~------l~~~~~--------------~~~~~~l~~~~~~LkpgG~li~~~~~ 143 (217)
T 3jwh_A 98 K----------RFHGYDAATVIEV------IEHLDL--------------SRLGAFERVLFEFAQPKIVIVTTPNI 143 (217)
T ss_dssp G----------GGCSCSEEEEESC------GGGCCH--------------HHHHHHHHHHHTTTCCSEEEEEEEBH
T ss_pred c----------cCCCcCEEeeHHH------HHcCCH--------------HHHHHHHHHHHHHcCCCEEEEEccCc
Confidence 1 1257999997421 211111 12347899999999999988766554
No 107
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.03 E-value=5.6e-10 Score=103.92 Aligned_cols=133 Identities=17% Similarity=0.064 Sum_probs=91.9
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
++++.+|||+|||+|..+..+++.++ +.+.|+++|+++ .+ ...++.+...|+...+.....
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~-------~~~~v~~~D~~~-~~----------~~~~~~~~~~d~~~~~~~~~~- 80 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIG-------GKGRIIACDLLP-MD----------PIVGVDFLQGDFRDELVMKAL- 80 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHC-------TTCEEEEEESSC-CC----------CCTTEEEEESCTTSHHHHHHH-
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhC-------CCCeEEEEECcc-cc----------ccCcEEEEEcccccchhhhhh-
Confidence 57889999999999999999998863 357999999998 43 236788889998765310000
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHHH
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAVI 334 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~VV 334 (646)
... .....||.|++|+|+...|.. ..+......++..++..+.++|+|||.++.++.. .++...+
T Consensus 81 ~~~-~~~~~~D~i~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~---~~~~~~~ 145 (180)
T 1ej0_A 81 LER-VGDSKVQVVMSDMAPNMSGTP-----------AVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ---GEGFDEY 145 (180)
T ss_dssp HHH-HTTCCEEEEEECCCCCCCSCH-----------HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES---STTHHHH
T ss_pred hcc-CCCCceeEEEECCCccccCCC-----------ccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec---CCcHHHH
Confidence 000 012479999999998766531 0112233445678999999999999999976543 3455556
Q ss_pred HHHHHHc
Q psy17365 335 QRLIVET 341 (646)
Q Consensus 335 ~~~L~~~ 341 (646)
...++.+
T Consensus 146 ~~~~~~~ 152 (180)
T 1ej0_A 146 LREIRSL 152 (180)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6666654
No 108
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.02 E-value=1.1e-09 Score=112.04 Aligned_cols=112 Identities=16% Similarity=0.129 Sum_probs=86.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEecCCCCCcccccc
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CAIITNHDASVMPNVLYT 253 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni~v~~~Da~~~p~~~~~ 253 (646)
++||.+|||+|||+|..|..|++.+.. +...|+|+|+|+..++.++++++..+.. +|.++++|+..++.
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~------~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~---- 137 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHH------DNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI---- 137 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCS------SSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC----
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCC------CCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc----
Confidence 578999999999999999999887531 3458999999999999999999988764 68999999987652
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
..||.|++.- ++..-++ .-...+|+++.+.|||||+|+.+.-.
T Consensus 138 --------~~~d~v~~~~------~l~~~~~--------------~~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 138 --------ENASMVVLNF------TLQFLEP--------------SERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp --------CSEEEEEEES------CGGGSCH--------------HHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred --------cccccceeee------eeeecCc--------------hhHhHHHHHHHHHcCCCcEEEEEecc
Confidence 4699998631 1211111 11236899999999999999987543
No 109
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.02 E-value=1.5e-09 Score=107.34 Aligned_cols=111 Identities=16% Similarity=0.149 Sum_probs=86.7
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
..++.+|||+|||+|..+..+++.. +...|+++|+++..++.+++++...+ ++.++++|+..++.
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~--------~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~----- 106 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKY--------PEATFTLVDMSEKMLEIAKNRFRGNL--KVKYIEADYSKYDF----- 106 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHC--------TTCEEEEEESCHHHHHHHHHHTCSCT--TEEEEESCTTTCCC-----
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhC--------CCCeEEEEECCHHHHHHHHHhhccCC--CEEEEeCchhccCC-----
Confidence 5678999999999999999999874 46799999999999999988876655 89999999987642
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCC
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLN 326 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~ 326 (646)
...||.|++... +..-++ .....+|.++.++|||||+|+.++....
T Consensus 107 ------~~~fD~v~~~~~------l~~~~~--------------~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 107 ------EEKYDMVVSALS------IHHLED--------------EDKKELYKRSYSILKESGIFINADLVHG 152 (234)
T ss_dssp ------CSCEEEEEEESC------GGGSCH--------------HHHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred ------CCCceEEEEeCc------cccCCH--------------HHHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 157999998532 211111 1123689999999999999999876543
No 110
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.02 E-value=2.1e-09 Score=107.14 Aligned_cols=109 Identities=17% Similarity=0.177 Sum_probs=88.4
Q ss_pred ccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEecCCCCCc
Q psy17365 170 PLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS-PCAIITNHDASVMP 248 (646)
Q Consensus 170 ~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~-~ni~v~~~Da~~~p 248 (646)
...+++.+|.+|||+|||+|..+.+++.. .+.|+++|+++.+++.++++++..++ .++.+...|+....
T Consensus 84 ~~~~~~~~~~~vldiG~G~G~~~~~l~~~----------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 153 (248)
T 2yvl_A 84 ALKLNLNKEKRVLEFGTGSGALLAVLSEV----------AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE 153 (248)
T ss_dssp HHHTTCCTTCEEEEECCTTSHHHHHHHHH----------SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC
T ss_pred HHhcCCCCCCEEEEeCCCccHHHHHHHHh----------CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc
Confidence 34457789999999999999999999876 35899999999999999999999887 67899999986532
Q ss_pred cccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 249 NVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 249 ~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
. ....||.|++|+| +|. .++..+.++|+|||+++.++.+.
T Consensus 154 ~----------~~~~~D~v~~~~~---------~~~------------------~~l~~~~~~L~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 154 V----------PEGIFHAAFVDVR---------EPW------------------HYLEKVHKSLMEGAPVGFLLPTA 193 (248)
T ss_dssp C----------CTTCBSEEEECSS---------CGG------------------GGHHHHHHHBCTTCEEEEEESSH
T ss_pred c----------CCCcccEEEECCc---------CHH------------------HHHHHHHHHcCCCCEEEEEeCCH
Confidence 0 1246999999876 221 35788899999999999876543
No 111
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.02 E-value=1.1e-09 Score=108.25 Aligned_cols=112 Identities=13% Similarity=0.110 Sum_probs=85.7
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcC-----CCCeEEEecCCCCCc
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLN-----SPCAIITNHDASVMP 248 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg-----~~ni~v~~~Da~~~p 248 (646)
.++++.+|||+|||+|..+.++++.++.. ..+.+.|+++|+++..++.+++++++.+ ..++.+..+|+....
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~---~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 153 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVL---ENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVN 153 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTT---TCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCC
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhccc---CCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcc
Confidence 57889999999999999999999875200 0035799999999999999999999988 678999999987642
Q ss_pred cccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 249 NVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 249 ~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
.... .....||+|+++.++.. ++..+.++|||||+||.++
T Consensus 154 ~~~~------~~~~~fD~I~~~~~~~~----------------------------~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 154 EEEK------KELGLFDAIHVGASASE----------------------------LPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp HHHH------HHHCCEEEEEECSBBSS----------------------------CCHHHHHHEEEEEEEEEEE
T ss_pred cccC------ccCCCcCEEEECCchHH----------------------------HHHHHHHhcCCCcEEEEEE
Confidence 0000 00246999999987531 2456788999999999764
No 112
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.01 E-value=2e-10 Score=114.83 Aligned_cols=122 Identities=16% Similarity=0.200 Sum_probs=92.2
Q ss_pred ccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEecCCCC
Q psy17365 168 IPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CAIITNHDASV 246 (646)
Q Consensus 168 l~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni~v~~~Da~~ 246 (646)
+...++...++.+|||+|||+|..|..++..+. +.+.|+++|+++..++.+++++++.|.. ++.+..+|+..
T Consensus 63 ~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~-------~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~ 135 (232)
T 3cbg_A 63 FLGLLISLTGAKQVLEIGVFRGYSALAMALQLP-------PDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALA 135 (232)
T ss_dssp HHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSC-------TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred HHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCC-------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 333344556778999999999999999988753 3679999999999999999999999985 58899999764
Q ss_pred C-ccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 247 M-PNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 247 ~-p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
. +.+.. .+ ....||.|++|++.. + ...++..+.++|+|||+||+..+.+
T Consensus 136 ~l~~l~~--~~---~~~~fD~V~~d~~~~---------~----------------~~~~l~~~~~~LkpgG~lv~~~~~~ 185 (232)
T 3cbg_A 136 TLEQLTQ--GK---PLPEFDLIFIDADKR---------N----------------YPRYYEIGLNLLRRGGLMVIDNVLW 185 (232)
T ss_dssp HHHHHHT--SS---SCCCEEEEEECSCGG---------G----------------HHHHHHHHHHTEEEEEEEEEECTTG
T ss_pred HHHHHHh--cC---CCCCcCEEEECCCHH---------H----------------HHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 3 21110 00 014699999997511 1 1357889999999999999988776
Q ss_pred C
Q psy17365 326 N 326 (646)
Q Consensus 326 ~ 326 (646)
.
T Consensus 186 ~ 186 (232)
T 3cbg_A 186 H 186 (232)
T ss_dssp G
T ss_pred C
Confidence 4
No 113
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.01 E-value=1.4e-09 Score=110.57 Aligned_cols=124 Identities=14% Similarity=0.138 Sum_probs=96.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
+.++.+|||+|||+|..+..++.. +. .|+|+|+|+..++.+++|+++.+.. +.+..+|+.... .
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~---------g~-~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~~--~--- 181 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL---------GG-KALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAAL--P--- 181 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT---------TC-EEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHHG--G---
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh---------CC-eEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhcC--c---
Confidence 467899999999999999887763 23 8999999999999999999999887 888888875421 0
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHHH
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAVI 334 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~VV 334 (646)
...||.|+++.+. .....++..+.++|||||+++.|.... +....+
T Consensus 182 ------~~~fD~Vv~n~~~-------------------------~~~~~~l~~~~~~LkpgG~lils~~~~---~~~~~v 227 (254)
T 2nxc_A 182 ------FGPFDLLVANLYA-------------------------ELHAALAPRYREALVPGGRALLTGILK---DRAPLV 227 (254)
T ss_dssp ------GCCEEEEEEECCH-------------------------HHHHHHHHHHHHHEEEEEEEEEEEEEG---GGHHHH
T ss_pred ------CCCCCEEEECCcH-------------------------HHHHHHHHHHHHHcCCCCEEEEEeecc---CCHHHH
Confidence 1469999987541 112478999999999999999876433 456677
Q ss_pred HHHHHHccCcEEEeec
Q psy17365 335 QRLIVETQGAVQLVDV 350 (646)
Q Consensus 335 ~~~L~~~~~~~elv~~ 350 (646)
.+++++.+ ++++.+
T Consensus 228 ~~~l~~~G--f~~~~~ 241 (254)
T 2nxc_A 228 REAMAGAG--FRPLEE 241 (254)
T ss_dssp HHHHHHTT--CEEEEE
T ss_pred HHHHHHCC--CEEEEE
Confidence 78888775 666654
No 114
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.99 E-value=2.6e-09 Score=104.71 Aligned_cols=113 Identities=11% Similarity=-0.014 Sum_probs=84.3
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-----CeEEEecCCCCCc
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-----CAIITNHDASVMP 248 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-----ni~v~~~Da~~~p 248 (646)
...++.+|||+|||+|..+..+++.. +...|+++|+++..++.+++++...+.. ++.+..+|+...+
T Consensus 26 ~~~~~~~vLDiGcG~G~~~~~l~~~~--------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 97 (219)
T 3jwg_A 26 KSVNAKKVIDLGCGEGNLLSLLLKDK--------SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRD 97 (219)
T ss_dssp HHTTCCEEEEETCTTCHHHHHHHTST--------TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCC
T ss_pred hhcCCCEEEEecCCCCHHHHHHHhcC--------CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccc
Confidence 34578899999999999999887642 3579999999999999999998877765 7899999985543
Q ss_pred cccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 249 NVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 249 ~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
. ....||.|++.. ++..-++ .....+|..+.++|||||.++.+.++
T Consensus 98 ~----------~~~~fD~V~~~~------~l~~~~~--------------~~~~~~l~~~~~~LkpgG~~i~~~~~ 143 (219)
T 3jwg_A 98 K----------RFSGYDAATVIE------VIEHLDE--------------NRLQAFEKVLFEFTRPQTVIVSTPNK 143 (219)
T ss_dssp G----------GGTTCSEEEEES------CGGGCCH--------------HHHHHHHHHHHTTTCCSEEEEEEEBG
T ss_pred c----------ccCCCCEEEEHH------HHHhCCH--------------HHHHHHHHHHHHhhCCCEEEEEccch
Confidence 2 125799999742 2221111 11247899999999999977765544
No 115
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.99 E-value=1.7e-09 Score=105.69 Aligned_cols=109 Identities=21% Similarity=0.235 Sum_probs=86.5
Q ss_pred cccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccc
Q psy17365 171 LLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNV 250 (646)
Q Consensus 171 ~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~ 250 (646)
..+.+.++.+|||+|||+|..+..++...+ +.+.|+++|+++..++.+++++...+..++.+...|+.....
T Consensus 71 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~- 142 (215)
T 2yxe_A 71 ELLDLKPGMKVLEIGTGCGYHAAVTAEIVG-------EDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE- 142 (215)
T ss_dssp HHTTCCTTCEEEEECCTTSHHHHHHHHHHC-------TTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG-
T ss_pred HhhCCCCCCEEEEECCCccHHHHHHHHHhC-------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC-
Confidence 345678999999999999999999998863 357999999999999999999999999899999999743211
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
....||.|+++.++.. + ...+.++|||||+|+.++.+
T Consensus 143 ---------~~~~fD~v~~~~~~~~---------~-------------------~~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 143 ---------PLAPYDRIYTTAAGPK---------I-------------------PEPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp ---------GGCCEEEEEESSBBSS---------C-------------------CHHHHHTEEEEEEEEEEESS
T ss_pred ---------CCCCeeEEEECCchHH---------H-------------------HHHHHHHcCCCcEEEEEECC
Confidence 1246999999865321 1 13677899999999987543
No 116
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.99 E-value=3.2e-09 Score=107.43 Aligned_cols=113 Identities=21% Similarity=0.255 Sum_probs=89.2
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEecCCCCCccc
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CAIITNHDASVMPNV 250 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni~v~~~Da~~~p~~ 250 (646)
.+.+.++.+|||+|||+|..+..+++.. ...|+++|+++..++.+++++...|.. ++.+..+|+..++.
T Consensus 56 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~---------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~- 125 (273)
T 3bus_A 56 LLDVRSGDRVLDVGCGIGKPAVRLATAR---------DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPF- 125 (273)
T ss_dssp HSCCCTTCEEEEESCTTSHHHHHHHHHS---------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS-
T ss_pred hcCCCCCCEEEEeCCCCCHHHHHHHHhc---------CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCC-
Confidence 3567889999999999999999998763 468999999999999999999988875 68999999877642
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
....||.|++.. ++..-++. ..+|.++.++|||||+|+.++...
T Consensus 126 ---------~~~~fD~v~~~~------~l~~~~~~----------------~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 126 ---------EDASFDAVWALE------SLHHMPDR----------------GRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp ---------CTTCEEEEEEES------CTTTSSCH----------------HHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred ---------CCCCccEEEEec------hhhhCCCH----------------HHHHHHHHHHcCCCeEEEEEEeec
Confidence 125799999732 22222221 368999999999999999887553
No 117
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.98 E-value=2.5e-09 Score=107.17 Aligned_cols=113 Identities=14% Similarity=0.112 Sum_probs=86.3
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccc
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~ 251 (646)
.+++.++.+|||+|||+|..+.+++... ...|+++|+++..++.+++++... .++.++.+|+..++.
T Consensus 50 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~---------~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~-- 116 (266)
T 3ujc_A 50 DIELNENSKVLDIGSGLGGGCMYINEKY---------GAHTHGIDICSNIVNMANERVSGN--NKIIFEANDILTKEF-- 116 (266)
T ss_dssp TCCCCTTCEEEEETCTTSHHHHHHHHHH---------CCEEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTTTCCC--
T ss_pred hcCCCCCCEEEEECCCCCHHHHHHHHHc---------CCEEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccccCCC--
Confidence 3467889999999999999999999874 358999999999999888776544 689999999987642
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
....||.|++... +..- . ......+|.++.++|||||+|+.++.+.
T Consensus 117 --------~~~~fD~v~~~~~------l~~~-------~-------~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 117 --------PENNFDLIYSRDA------ILAL-------S-------LENKNKLFQKCYKWLKPTGTLLITDYCA 162 (266)
T ss_dssp --------CTTCEEEEEEESC------GGGS-------C-------HHHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred --------CCCcEEEEeHHHH------HHhc-------C-------hHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 1257999997421 1111 0 0223578999999999999999887543
No 118
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.98 E-value=1.2e-09 Score=117.81 Aligned_cols=115 Identities=18% Similarity=0.183 Sum_probs=92.7
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCC
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~ 255 (646)
.++.+|||+|||+|..+..++.. ...|+++|+|+..++.+++|++.++.. +.++..|+...+.
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~----------g~~V~gvDis~~al~~A~~n~~~~~~~-v~~~~~D~~~~~~------ 294 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM----------GAEVVGVEDDLASVLSLQKGLEANALK-AQALHSDVDEALT------ 294 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT----------TCEEEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTTSC------
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc----------CCEEEEEECCHHHHHHHHHHHHHcCCC-eEEEEcchhhccc------
Confidence 47889999999999999998865 248999999999999999999998876 7889999876542
Q ss_pred CCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCcc
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPL 328 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ 328 (646)
....||.|++|+|+...+.. .......++..+.++|||||+|+++++...+.
T Consensus 295 ----~~~~fD~Ii~npp~~~~~~~-----------------~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~ 346 (381)
T 3dmg_A 295 ----EEARFDIIVTNPPFHVGGAV-----------------ILDVAQAFVNVAAARLRPGGVFFLVSNPFLKY 346 (381)
T ss_dssp ----TTCCEEEEEECCCCCTTCSS-----------------CCHHHHHHHHHHHHHEEEEEEEEEEECTTSCH
T ss_pred ----cCCCeEEEEECCchhhcccc-----------------cHHHHHHHHHHHHHhcCcCcEEEEEEcCCCCh
Confidence 12579999999997643311 11234578999999999999999998776544
No 119
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.98 E-value=5.6e-10 Score=125.76 Aligned_cols=169 Identities=12% Similarity=0.038 Sum_probs=113.8
Q ss_pred cccEEEecccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCC--C--------CCcEEEEEcCCHHHHHHH
Q psy17365 156 TGHISRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNP--V--------PSGLVVANDVDNNRCYML 225 (646)
Q Consensus 156 ~G~i~~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~--~--------~~G~VvA~Dis~~Rl~~L 225 (646)
.|.++--...+.+.+.++++.++.+|||.|||+|+..+++++.+....... . ....++|+|+++..+.++
T Consensus 148 ~G~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA 227 (541)
T 2ar0_A 148 AGQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA 227 (541)
T ss_dssp --CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHH
T ss_pred CCeeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHH
Confidence 466665555555666778899999999999999999999998875211000 0 023799999999999999
Q ss_pred HHHHHHcCCCC-----eEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHH
Q psy17365 226 VHQAKRLNSPC-----AIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGI 300 (646)
Q Consensus 226 ~~n~~rlg~~n-----i~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~l 300 (646)
+.|+...|..+ +.+.++|+...+.. ....||+|+++||+++..... ....+.. .-...
T Consensus 228 ~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~---------~~~~fD~Vv~NPPf~~~~~~~----~~~~~~~----~~~~~ 290 (541)
T 2ar0_A 228 LMNCLLHDIEGNLDHGGAIRLGNTLGSDGE---------NLPKAHIVATNPPFGSAAGTN----ITRTFVH----PTSNK 290 (541)
T ss_dssp HHHHHTTTCCCBGGGTBSEEESCTTSHHHH---------TSCCEEEEEECCCCTTCSSCC----CCSCCSS----CCSCH
T ss_pred HHHHHHhCCCccccccCCeEeCCCcccccc---------cccCCeEEEECCCcccccchh----hHhhcCC----CCCch
Confidence 99998888876 77888887543211 124799999999999865432 1111111 01223
Q ss_pred HHHHHHHHHHhhccCCeEEEEcCC--CCccccHHHHHHHHHHc
Q psy17365 301 QYRIVKRGVEMLAVGGKIAYSTCS--LNPLEDEAVIQRLIVET 341 (646)
Q Consensus 301 Q~~IL~~A~~lLKpGG~LVYSTCS--l~p~ENE~VV~~~L~~~ 341 (646)
+...+.+++++|||||++++.+.. +.....+..+.+.|.+.
T Consensus 291 ~~~Fl~~~l~~Lk~gGr~a~V~p~~~L~~~~~~~~iR~~L~~~ 333 (541)
T 2ar0_A 291 QLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDLMDK 333 (541)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEHHHHHCCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEEEecCcceecCcHHHHHHHHHhhc
Confidence 457899999999999999887543 33333345565555444
No 120
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.97 E-value=7.2e-10 Score=109.88 Aligned_cols=109 Identities=14% Similarity=0.127 Sum_probs=84.7
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcC-----CCCeEEEecCCCCCc
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLN-----SPCAIITNHDASVMP 248 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg-----~~ni~v~~~Da~~~p 248 (646)
.++++.+|||+|||+|..|..+++.++... ..+.+.|+++|+++..++.+++++.+.+ ..++.+..+|+....
T Consensus 81 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~--~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 158 (227)
T 1r18_A 81 HLKPGARILDVGSGSGYLTACFYRYIKAKG--VDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY 158 (227)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSC--CCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC
T ss_pred hCCCCCEEEEECCCccHHHHHHHHhccccc--CCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCC
Confidence 578899999999999999999998764100 0013699999999999999999998877 678999999986521
Q ss_pred cccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 249 NVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 249 ~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
. ....||+|+++.++.. ++..+.++|||||+||.++
T Consensus 159 ~----------~~~~fD~I~~~~~~~~----------------------------~~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 159 P----------PNAPYNAIHVGAAAPD----------------------------TPTELINQLASGGRLIVPV 194 (227)
T ss_dssp G----------GGCSEEEEEECSCBSS----------------------------CCHHHHHTEEEEEEEEEEE
T ss_pred C----------cCCCccEEEECCchHH----------------------------HHHHHHHHhcCCCEEEEEE
Confidence 0 1247999999877421 1256788999999999775
No 121
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.97 E-value=3.5e-09 Score=102.60 Aligned_cols=111 Identities=14% Similarity=0.086 Sum_probs=87.2
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEecCCCCCcccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CAIITNHDASVMPNVL 251 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni~v~~~Da~~~p~~~ 251 (646)
+.++++ +|||+|||+|..+..+++. +...|+++|+++..++.++++++..+.. ++.+.++|+..++.
T Consensus 40 ~~~~~~-~vLdiG~G~G~~~~~l~~~---------~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-- 107 (219)
T 3dlc_A 40 FGITAG-TCIDIGSGPGALSIALAKQ---------SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPI-- 107 (219)
T ss_dssp HCCCEE-EEEEETCTTSHHHHHHHHH---------SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSS--
T ss_pred cCCCCC-EEEEECCCCCHHHHHHHHc---------CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCC--
Confidence 345666 9999999999999999876 3569999999999999999999998875 79999999987641
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
....||.|++... +..-++ ...+|.++.++|||||+|+.++...
T Consensus 108 --------~~~~~D~v~~~~~------l~~~~~----------------~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 108 --------EDNYADLIVSRGS------VFFWED----------------VATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp --------CTTCEEEEEEESC------GGGCSC----------------HHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred --------CcccccEEEECch------HhhccC----------------HHHHHHHHHHhCCCCCEEEEEeccC
Confidence 1257999998542 111111 2368999999999999999875433
No 122
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.97 E-value=5.6e-09 Score=104.58 Aligned_cols=107 Identities=17% Similarity=0.139 Sum_probs=81.4
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~ 252 (646)
+...++.+|||+|||+|..+..+++. +...|+++|+++..++.+++++. ..++.+..+|+..++.
T Consensus 40 ~~~~~~~~vLD~GcG~G~~~~~l~~~---------~~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~--- 104 (253)
T 3g5l_A 40 LPDFNQKTVLDLGCGFGWHCIYAAEH---------GAKKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDIAI--- 104 (253)
T ss_dssp CCCCTTCEEEEETCTTCHHHHHHHHT---------TCSEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGCCC---
T ss_pred hhccCCCEEEEECCCCCHHHHHHHHc---------CCCEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhCCC---
Confidence 44557899999999999999988875 23489999999999988877654 5678999999877642
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcC
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTC 323 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTC 323 (646)
....||.|++.. ++..-++ ...+|..+.++|||||+|+.++.
T Consensus 105 -------~~~~fD~v~~~~------~l~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 105 -------EPDAYNVVLSSL------ALHYIAS----------------FDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp -------CTTCEEEEEEES------CGGGCSC----------------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -------CCCCeEEEEEch------hhhhhhh----------------HHHHHHHHHHHcCCCcEEEEEeC
Confidence 125799999842 2221122 24789999999999999998754
No 123
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.97 E-value=1.9e-10 Score=124.22 Aligned_cols=152 Identities=15% Similarity=0.120 Sum_probs=100.7
Q ss_pred ccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcc
Q psy17365 170 PLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPN 249 (646)
Q Consensus 170 ~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~ 249 (646)
+.++++.++.+|||+|||+|+.+..+++.+. +...|+|+|+++..++.+ .++.+.++|+..+..
T Consensus 32 ~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~-------~~~~i~gvDi~~~~~~~a---------~~~~~~~~D~~~~~~ 95 (421)
T 2ih2_A 32 VSLAEAPRGGRVLEPACAHGPFLRAFREAHG-------TAYRFVGVEIDPKALDLP---------PWAEGILADFLLWEP 95 (421)
T ss_dssp HHHCCCCTTCEEEEETCTTCHHHHHHHHHHC-------SCSEEEEEESCTTTCCCC---------TTEEEEESCGGGCCC
T ss_pred HHhhccCCCCEEEECCCCChHHHHHHHHHhC-------CCCeEEEEECCHHHHHhC---------CCCcEEeCChhhcCc
Confidence 3344555677999999999999999998763 356899999999887544 568889999876431
Q ss_pred ccccCCCCCCCCCCCCeeecCCCCCCCcccccC-----ccccccCCc--chhhhhHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 250 VLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKN-----PDIWTKWTP--SNGNNLHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 250 ~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~-----pd~~~~w~~--~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
...||.|+++||+...+...+. .+....+.. ........++..++.++.++|++||++++.+
T Consensus 96 -----------~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~ 164 (421)
T 2ih2_A 96 -----------GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVV 164 (421)
T ss_dssp -----------SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----------cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEE
Confidence 2479999999999877642110 111000000 0011123466789999999999999999988
Q ss_pred CC--CCccccHHHHHHHHHHccCcEEEeec
Q psy17365 323 CS--LNPLEDEAVIQRLIVETQGAVQLVDV 350 (646)
Q Consensus 323 CS--l~p~ENE~VV~~~L~~~~~~~elv~~ 350 (646)
++ ++....+. +.+.|.+.+. ..++.+
T Consensus 165 p~~~l~~~~~~~-lr~~l~~~~~-~~i~~l 192 (421)
T 2ih2_A 165 PATWLVLEDFAL-LREFLAREGK-TSVYYL 192 (421)
T ss_dssp EGGGGTCGGGHH-HHHHHHHHSE-EEEEEE
T ss_pred ChHHhcCccHHH-HHHHHHhcCC-eEEEEC
Confidence 76 33333444 5555555442 455543
No 124
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.96 E-value=6.2e-09 Score=106.39 Aligned_cols=112 Identities=13% Similarity=0.063 Sum_probs=87.7
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEecCCCCCccc
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CAIITNHDASVMPNV 250 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni~v~~~Da~~~p~~ 250 (646)
.+++.++.+|||+|||+|..+..+++.. ...|+++|+++..++.++++++..|.. ++.+...|+..++
T Consensus 59 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~---------~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-- 127 (287)
T 1kpg_A 59 KLGLQPGMTLLDVGCGWGATMMRAVEKY---------DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD-- 127 (287)
T ss_dssp TTTCCTTCEEEEETCTTSHHHHHHHHHH---------CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC--
T ss_pred HcCCCCcCEEEEECCcccHHHHHHHHHc---------CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC--
Confidence 3567889999999999999999999764 238999999999999999999988864 7889999986553
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
..||.|++.- ++..-++ .....+|.++.++|||||+|+.++.+.
T Consensus 128 -----------~~fD~v~~~~------~l~~~~~--------------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 128 -----------EPVDRIVSIG------AFEHFGH--------------ERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp -----------CCCSEEEEES------CGGGTCT--------------TTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred -----------CCeeEEEEeC------chhhcCh--------------HHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 3699999742 2222111 112468999999999999999887654
No 125
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.96 E-value=2.6e-10 Score=112.60 Aligned_cols=117 Identities=19% Similarity=0.140 Sum_probs=89.4
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEecCCCCCccc
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS-PCAIITNHDASVMPNV 250 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~-~ni~v~~~Da~~~p~~ 250 (646)
++...++.+|||+|||+|..|..+++.+. +.+.|+++|+++.+++.+++++++.|. .++.++.+|+......
T Consensus 64 l~~~~~~~~vLdiG~G~G~~~~~la~~~~-------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~ 136 (229)
T 2avd_A 64 LARLIQAKKALDLGTFTGYSALALALALP-------ADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDE 136 (229)
T ss_dssp HHHHTTCCEEEEECCTTSHHHHHHHTTSC-------TTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHH
T ss_pred HHHhcCCCEEEEEcCCccHHHHHHHHhCC-------CCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHH
Confidence 34456788999999999999999987652 367999999999999999999999987 5799999998653211
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
.. ..+ ....||.|++|++.. .+..++..+.++|+|||+||...+.
T Consensus 137 ~~--~~~--~~~~~D~v~~d~~~~-------------------------~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 137 LL--AAG--EAGTFDVAVVDADKE-------------------------NCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp HH--HTT--CTTCEEEEEECSCST-------------------------THHHHHHHHHHHEEEEEEEEEECCS
T ss_pred HH--hcC--CCCCccEEEECCCHH-------------------------HHHHHHHHHHHHcCCCeEEEEECCC
Confidence 10 000 014799999998610 1236788999999999999987655
No 126
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.96 E-value=1.3e-09 Score=108.76 Aligned_cols=108 Identities=15% Similarity=0.146 Sum_probs=84.9
Q ss_pred cccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCc
Q psy17365 169 PPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMP 248 (646)
Q Consensus 169 ~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p 248 (646)
....+++.++.+|||+|||+|..+..+++.. + +.|+++|+++..++.++++++..|..++.+..+|+.. +
T Consensus 83 ~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~--------~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~ 152 (235)
T 1jg1_A 83 MLEIANLKPGMNILEVGTGSGWNAALISEIV--------K-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSK-G 152 (235)
T ss_dssp HHHHHTCCTTCCEEEECCTTSHHHHHHHHHH--------C-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG-C
T ss_pred HHHhcCCCCCCEEEEEeCCcCHHHHHHHHHh--------C-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCccc-C
Confidence 3345678899999999999999999999875 3 6899999999999999999999999899999999722 1
Q ss_pred cccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcC
Q psy17365 249 NVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTC 323 (646)
Q Consensus 249 ~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTC 323 (646)
. .....||+|+++.+... + ...+.++|+|||+|+.++-
T Consensus 153 -~--------~~~~~fD~Ii~~~~~~~---------~-------------------~~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 153 -F--------PPKAPYDVIIVTAGAPK---------I-------------------PEPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp -C--------GGGCCEEEEEECSBBSS---------C-------------------CHHHHHTEEEEEEEEEEEC
T ss_pred -C--------CCCCCccEEEECCcHHH---------H-------------------HHHHHHhcCCCcEEEEEEe
Confidence 0 01135999999865321 1 1256789999999998754
No 127
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.95 E-value=2.9e-09 Score=103.32 Aligned_cols=103 Identities=14% Similarity=0.125 Sum_probs=85.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
++.+|||+|||+|..+..++... +.+.|+++|+++..++.++++++..+..++.+.++|+..++.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~--------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~------- 129 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVR--------PEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPS------- 129 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHC--------TTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCC-------
T ss_pred CCCeEEEECCCCCHHHHHHHHHC--------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCc-------
Confidence 47899999999999999998874 467999999999999999999999999889999999876541
Q ss_pred CCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 257 GNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 257 g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
...||.|+++.- .+ ...++..+.++|+|||+++.....
T Consensus 130 ----~~~~D~i~~~~~----------~~----------------~~~~l~~~~~~L~~gG~l~~~~~~ 167 (207)
T 1jsx_A 130 ----EPPFDGVISRAF----------AS----------------LNDMVSWCHHLPGEQGRFYALKGQ 167 (207)
T ss_dssp ----CSCEEEEECSCS----------SS----------------HHHHHHHHTTSEEEEEEEEEEESS
T ss_pred ----cCCcCEEEEecc----------CC----------------HHHHHHHHHHhcCCCcEEEEEeCC
Confidence 146999997521 00 237899999999999999987544
No 128
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.95 E-value=4e-10 Score=118.10 Aligned_cols=111 Identities=18% Similarity=0.194 Sum_probs=75.1
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcC----CHHHHHHHHHHHHHcCCCCeEEEec-CCCCCcc
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDV----DNNRCYMLVHQAKRLNSPCAIITNH-DASVMPN 249 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Di----s~~Rl~~L~~n~~rlg~~ni~v~~~-Da~~~p~ 249 (646)
++||.+|||+|||||+.|..+++. |.|+|+|+ ++.++..+ ..++.+.+++.+..+ |+..++
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~-----------~~V~gvD~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~D~~~l~- 145 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL-----------KNVREVKGLTKGGPGHEEPI--PMSTYGWNLVRLQSGVDVFFIP- 145 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS-----------TTEEEEEEECCCSTTSCCCC--CCCSTTGGGEEEECSCCTTTSC-
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc-----------CCEEEEeccccCchhHHHHH--HhhhcCCCCeEEEeccccccCC-
Confidence 367899999999999999888753 57999998 44332111 112234467888888 877653
Q ss_pred ccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCcc
Q psy17365 250 VLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPL 328 (646)
Q Consensus 250 ~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ 328 (646)
...||+|+||.+|+ .|.. ... +..+..+|..+.++|||||.+|.. .+.+.
T Consensus 146 -----------~~~fD~V~sd~~~~-~g~~----------~~d-----~~~~l~~L~~~~~~LkpGG~~v~k--v~~~~ 195 (305)
T 2p41_A 146 -----------PERCDTLLCDIGES-SPNP----------TVE-----AGRTLRVLNLVENWLSNNTQFCVK--VLNPY 195 (305)
T ss_dssp -----------CCCCSEEEECCCCC-CSSH----------HHH-----HHHHHHHHHHHHHHCCTTCEEEEE--ESCCC
T ss_pred -----------cCCCCEEEECCccc-cCcc----------hhh-----HHHHHHHHHHHHHHhCCCCEEEEE--eCCCC
Confidence 14799999999987 5531 000 111225788899999999988853 34443
No 129
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.94 E-value=7.4e-10 Score=110.41 Aligned_cols=115 Identities=16% Similarity=0.122 Sum_probs=84.1
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
++++.+|||+|||+|..+..++.. +...|+++|+++..++.++++++..+ .++.++.+|+..+...
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~---------~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~---- 123 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEA---------PIDEHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDVAPT---- 123 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTS---------CEEEEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHHGGG----
T ss_pred CCCCCeEEEEeccCCHHHHHHHhc---------CCCeEEEEcCCHHHHHHHHHHHHhcC-CCeEEEecCHHHhhcc----
Confidence 568899999999999999888643 24489999999999999999888777 6789999998765110
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
.....||.|++|.- +. . .+ .+. ......++.++.++|||||+|++.+++
T Consensus 124 ----~~~~~fD~V~~d~~--~~-~---~~----~~~-------~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 124 ----LPDGHFDGILYDTY--PL-S---EE----TWH-------THQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp ----SCTTCEEEEEECCC--CC-B---GG----GTT-------THHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred ----cCCCceEEEEECCc--cc-c---hh----hhh-------hhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 01257999999721 10 0 01 111 122346789999999999999987654
No 130
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.94 E-value=4.1e-09 Score=115.35 Aligned_cols=79 Identities=20% Similarity=0.144 Sum_probs=68.9
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
+.++.+|||+|||+|..|..+|.. ...|+|+|+++..++.+++|++.+|+. +.+.++|+..++.
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~----------~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~----- 351 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR----------GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSV----- 351 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT----------TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCC-----
T ss_pred cCCCCEEEEeeccchHHHHHHHHc----------CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCc-----
Confidence 678899999999999999998864 358999999999999999999999988 9999999977531
Q ss_pred CCCCCCCCCCCeeecCCCCCCC
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGD 276 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~ 276 (646)
..||.|++|+|.+|.
T Consensus 352 -------~~fD~Vv~dPPr~g~ 366 (425)
T 2jjq_A 352 -------KGFDTVIVDPPRAGL 366 (425)
T ss_dssp -------TTCSEEEECCCTTCS
T ss_pred -------cCCCEEEEcCCccch
Confidence 169999999997654
No 131
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.94 E-value=2.5e-09 Score=110.91 Aligned_cols=115 Identities=15% Similarity=0.022 Sum_probs=89.2
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC-eEEEecCCCCCcccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC-AIITNHDASVMPNVL 251 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n-i~v~~~Da~~~p~~~ 251 (646)
..+.++.+|||+|||+|..+..+|.... +.+.|+++|+++..++.+++++...|..+ +.++++|+..++.
T Consensus 114 ~~l~~~~~vLDiGcG~G~~~~~la~~~~-------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-- 184 (305)
T 3ocj_A 114 RHLRPGCVVASVPCGWMSELLALDYSAC-------PGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT-- 184 (305)
T ss_dssp HHCCTTCEEEETTCTTCHHHHTSCCTTC-------TTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC--
T ss_pred hhCCCCCEEEEecCCCCHHHHHHHHhcC-------CCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCc--
Confidence 3467899999999999999988753221 57799999999999999999999888765 8999999987642
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
...||.|++..+ +...|+. ..+..+|..+.++|||||+|+.++.+
T Consensus 185 ---------~~~fD~v~~~~~------~~~~~~~-------------~~~~~~l~~~~~~LkpgG~l~i~~~~ 229 (305)
T 3ocj_A 185 ---------REGYDLLTSNGL------NIYEPDD-------------ARVTELYRRFWQALKPGGALVTSFLT 229 (305)
T ss_dssp ---------CSCEEEEECCSS------GGGCCCH-------------HHHHHHHHHHHHHEEEEEEEEEECCC
T ss_pred ---------cCCeEEEEECCh------hhhcCCH-------------HHHHHHHHHHHHhcCCCeEEEEEecC
Confidence 157999998543 2222221 22346899999999999999988744
No 132
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.94 E-value=8.4e-09 Score=105.92 Aligned_cols=110 Identities=12% Similarity=0.111 Sum_probs=87.8
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEecCCCCCccccc
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS-PCAIITNHDASVMPNVLY 252 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~-~ni~v~~~Da~~~p~~~~ 252 (646)
.+.++.+|||+|||+|..+..+++.. ...|+++|+++..++.++++++..|. .++.+..+|+..+|.
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~---------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~--- 146 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKF---------GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPC--- 146 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHH---------CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS---
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHh---------CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCC---
Confidence 56789999999999999999998874 24899999999999999999988887 479999999887652
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
....||.|++.- ++..-++ ...+|.++.++|||||+|+.++..
T Consensus 147 -------~~~~fD~v~~~~------~l~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 147 -------EDNSYDFIWSQD------AFLHSPD----------------KLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp -------CTTCEEEEEEES------CGGGCSC----------------HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred -------CCCCEeEEEecc------hhhhcCC----------------HHHHHHHHHHHcCCCeEEEEEEec
Confidence 125799999732 2222222 247899999999999999988754
No 133
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.93 E-value=9.5e-10 Score=110.41 Aligned_cols=113 Identities=17% Similarity=0.105 Sum_probs=84.1
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
..+|.+|||+|||.|..+.++++. ....|+++|+|+..++.++++.+..+ .++.++.+|+.......
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~---------~~~~v~~id~~~~~~~~a~~~~~~~~-~~~~~~~~~a~~~~~~~--- 124 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEA---------PIDEHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDVAPTL--- 124 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTS---------CEEEEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHHGGGS---
T ss_pred ccCCCeEEEECCCccHHHHHHHHh---------CCcEEEEEeCCHHHHHHHHHHHhhCC-CceEEEeehHHhhcccc---
Confidence 368999999999999998888754 23579999999999999999887766 35778888886543211
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
....||.|++|+..+..... .......++.++.++|||||+++|.+
T Consensus 125 -----~~~~FD~i~~D~~~~~~~~~-----------------~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 125 -----PDGHFDGILYDTYPLSEETW-----------------HTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp -----CTTCEEEEEECCCCCBGGGT-----------------TTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred -----cccCCceEEEeeeecccchh-----------------hhcchhhhhhhhhheeCCCCEEEEEe
Confidence 12579999999764333211 11223478899999999999999854
No 134
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.93 E-value=4.2e-09 Score=113.25 Aligned_cols=120 Identities=13% Similarity=0.094 Sum_probs=90.3
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHc-----C---CCCeEEEecC
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRL-----N---SPCAIITNHD 243 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rl-----g---~~ni~v~~~D 243 (646)
.+++.++.+|||+|||+|..+..+++.++ +.+.|+++|+++..++.+++++++. | .+++.++.+|
T Consensus 78 ~~~~~~~~~VLDlGcG~G~~~~~la~~~~-------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d 150 (383)
T 4fsd_A 78 ADGSLEGATVLDLGCGTGRDVYLASKLVG-------EHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGF 150 (383)
T ss_dssp CGGGGTTCEEEEESCTTSHHHHHHHHHHT-------TTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESC
T ss_pred cccCCCCCEEEEecCccCHHHHHHHHHhC-------CCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEcc
Confidence 34567899999999999999999998874 4679999999999999999998765 3 3689999999
Q ss_pred CCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcC
Q psy17365 244 ASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTC 323 (646)
Q Consensus 244 a~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTC 323 (646)
+..+..... .......||.|++... +...++ ...+|.++.++|||||+|+.++.
T Consensus 151 ~~~l~~~~~----~~~~~~~fD~V~~~~~------l~~~~d----------------~~~~l~~~~r~LkpgG~l~i~~~ 204 (383)
T 4fsd_A 151 IENLATAEP----EGVPDSSVDIVISNCV------CNLSTN----------------KLALFKEIHRVLRDGGELYFSDV 204 (383)
T ss_dssp TTCGGGCBS----CCCCTTCEEEEEEESC------GGGCSC----------------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHhhhccc----CCCCCCCEEEEEEccc------hhcCCC----------------HHHHHHHHHHHcCCCCEEEEEEe
Confidence 987522100 0011357999998632 222222 13789999999999999998864
Q ss_pred C
Q psy17365 324 S 324 (646)
Q Consensus 324 S 324 (646)
.
T Consensus 205 ~ 205 (383)
T 4fsd_A 205 Y 205 (383)
T ss_dssp E
T ss_pred c
Confidence 3
No 135
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.93 E-value=1.1e-09 Score=114.19 Aligned_cols=124 Identities=21% Similarity=0.236 Sum_probs=83.9
Q ss_pred ccCCCCCCeEEEEcC------CCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEE-EecCC
Q psy17365 172 LLDVQTHHKVLDMCA------APGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAII-TNHDA 244 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCA------aPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v-~~~Da 244 (646)
.+.+++|++|||+|| |||+ ..+++.++ +.+.|+|+|+++. +.++.+ +++|+
T Consensus 58 ~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~-------~~~~V~gvDis~~-------------v~~v~~~i~gD~ 115 (290)
T 2xyq_A 58 TLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLP-------TGTLLVDSDLNDF-------------VSDADSTLIGDC 115 (290)
T ss_dssp CCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSC-------TTCEEEEEESSCC-------------BCSSSEEEESCG
T ss_pred hcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcC-------CCCEEEEEECCCC-------------CCCCEEEEECcc
Confidence 356789999999999 7798 44555542 3689999999997 246788 99998
Q ss_pred CCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 245 SVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 245 ~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
..++. ...||+|++|++++..|.... + ... ...+...+|..+.++|||||+++..+-.
T Consensus 116 ~~~~~-----------~~~fD~Vvsn~~~~~~g~~~~--d--------~~~-~~~l~~~~l~~a~r~LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 116 ATVHT-----------ANKWDLIISDMYDPRTKHVTK--E--------NDS-KEGFFTYLCGFIKQKLALGGSIAVKITE 173 (290)
T ss_dssp GGCCC-----------SSCEEEEEECCCCCC---CCS--C--------CCC-CCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred ccCCc-----------cCcccEEEEcCCccccccccc--c--------ccc-hHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 76531 146999999987666554321 1 111 1123458899999999999999975422
Q ss_pred CCccccHHHHHHHHHHcc
Q psy17365 325 LNPLEDEAVIQRLIVETQ 342 (646)
Q Consensus 325 l~p~ENE~VV~~~L~~~~ 342 (646)
....+ .+.++|++++
T Consensus 174 --~~~~~-~l~~~l~~~G 188 (290)
T 2xyq_A 174 --HSWNA-DLYKLMGHFS 188 (290)
T ss_dssp --SSCCH-HHHHHHTTEE
T ss_pred --cCCHH-HHHHHHHHcC
Confidence 22333 5556677664
No 136
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.93 E-value=8.3e-09 Score=101.25 Aligned_cols=112 Identities=17% Similarity=0.180 Sum_probs=85.5
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-----CeEEEecCCCCCcc
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-----CAIITNHDASVMPN 249 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-----ni~v~~~Da~~~p~ 249 (646)
++++.+|||+|||+|..+..++.. ...|+++|+++..++.++.++...+.. ++.+...|+..++.
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~----------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 97 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK----------GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSF 97 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT----------TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCS
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC----------CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCC
Confidence 457899999999999999988865 348999999999999999988877763 57888999877642
Q ss_pred ccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 250 VLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 250 ~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
....||.|++... +...++. .....+|..+.++|||||+|+.++...
T Consensus 98 ----------~~~~~D~v~~~~~------l~~~~~~-------------~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 98 ----------HDSSFDFAVMQAF------LTSVPDP-------------KERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp ----------CTTCEEEEEEESC------GGGCCCH-------------HHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred ----------CCCceeEEEEcch------hhcCCCH-------------HHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 1257999998532 2222221 112368999999999999999987654
No 137
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.93 E-value=3.1e-09 Score=103.81 Aligned_cols=136 Identities=16% Similarity=0.185 Sum_probs=97.6
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccc
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~ 251 (646)
++...++.+|||+|||+|..+..+++. ...|+|+|+++..++.+++++...+ ++.++++|+..++.
T Consensus 46 ~~~~~~~~~vLDiGcG~G~~~~~l~~~----------~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~-- 111 (216)
T 3ofk_A 46 SLSSGAVSNGLEIGCAAGAFTEKLAPH----------CKRLTVIDVMPRAIGRACQRTKRWS--HISWAATDILQFST-- 111 (216)
T ss_dssp HTTTSSEEEEEEECCTTSHHHHHHGGG----------EEEEEEEESCHHHHHHHHHHTTTCS--SEEEEECCTTTCCC--
T ss_pred HcccCCCCcEEEEcCCCCHHHHHHHHc----------CCEEEEEECCHHHHHHHHHhcccCC--CeEEEEcchhhCCC--
Confidence 455678889999999999999888754 2589999999999999998876644 79999999987651
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcC------CC
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTC------SL 325 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTC------Sl 325 (646)
...||.|++. +++..-++. .....+|.++.++|||||.|+++|. ++
T Consensus 112 ---------~~~fD~v~~~------~~l~~~~~~-------------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~ 163 (216)
T 3ofk_A 112 ---------AELFDLIVVA------EVLYYLEDM-------------TQMRTAIDNMVKMLAPGGHLVFGSARDATCRRW 163 (216)
T ss_dssp ---------SCCEEEEEEE------SCGGGSSSH-------------HHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHT
T ss_pred ---------CCCccEEEEc------cHHHhCCCH-------------HHHHHHHHHHHHHcCCCCEEEEEecCCCcchhh
Confidence 2579999985 222222211 1224689999999999999999762 23
Q ss_pred CccccHHHHHHHHHHccCcEEEee
Q psy17365 326 NPLEDEAVIQRLIVETQGAVQLVD 349 (646)
Q Consensus 326 ~p~ENE~VV~~~L~~~~~~~elv~ 349 (646)
........+..++...-..++.+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~e~~~ 187 (216)
T 3ofk_A 164 GHVAGAETVITILTEALTEVERVQ 187 (216)
T ss_dssp TCSCCHHHHHHHHHHHSEEEEEEE
T ss_pred hhhhhHHHHHHHHHhhccceEEEe
Confidence 335556666666755433344444
No 138
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.93 E-value=8.6e-10 Score=114.24 Aligned_cols=123 Identities=17% Similarity=0.159 Sum_probs=89.9
Q ss_pred ccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEecCCCCCc
Q psy17365 170 PLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS-PCAIITNHDASVMP 248 (646)
Q Consensus 170 ~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~-~ni~v~~~Da~~~p 248 (646)
+..+++.++++|||+|||+|..|..+++. .+.|+|+|+|+..+..+++++...+. +++.++++|+..++
T Consensus 21 ~~~~~~~~~~~VLDiG~G~G~lt~~L~~~----------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~ 90 (285)
T 1zq9_A 21 IDKAALRPTDVVLEVGPGTGNMTVKLLEK----------AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTD 90 (285)
T ss_dssp HHHTCCCTTCEEEEECCTTSTTHHHHHHH----------SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSC
T ss_pred HHhcCCCCCCEEEEEcCcccHHHHHHHhh----------CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceeccc
Confidence 34567789999999999999999999876 35899999999999999999887776 68999999997653
Q ss_pred cccccCCCCCCCCCCCCeeecCCCCCCCc-----ccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcC
Q psy17365 249 NVLYTDADGNKVPMKFDRVLCDVPCTGDG-----TMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTC 323 (646)
Q Consensus 249 ~~~~~~~~g~~~~~~FD~IL~D~PCSG~G-----~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTC 323 (646)
. ..||.|+++.|+.... .+.+.++. ...+.-+|+++..+ .+++|||.+ |+++
T Consensus 91 ~------------~~fD~vv~nlpy~~~~~~~~~~l~~~~~~--------~~~~~m~qkEva~r--~vlkPGg~~-y~~l 147 (285)
T 1zq9_A 91 L------------PFFDTCVANLPYQISSPFVFKLLLHRPFF--------RCAILMFQREFALR--LVAKPGDKL-YCRL 147 (285)
T ss_dssp C------------CCCSEEEEECCGGGHHHHHHHHHHCSSCC--------SEEEEEEEHHHHHH--HHCCTTCTT-CSHH
T ss_pred c------------hhhcEEEEecCcccchHHHHHHHhcCcch--------hhhhhhhhHHHHHH--HhcCCCCcc-cchh
Confidence 1 3699999999987642 11111111 01111234444432 378999996 8888
Q ss_pred CC
Q psy17365 324 SL 325 (646)
Q Consensus 324 Sl 325 (646)
|+
T Consensus 148 sv 149 (285)
T 1zq9_A 148 SI 149 (285)
T ss_dssp HH
T ss_pred hh
Confidence 86
No 139
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.92 E-value=6.5e-09 Score=108.09 Aligned_cols=114 Identities=11% Similarity=0.122 Sum_probs=89.8
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEecCCCCCccc
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CAIITNHDASVMPNV 250 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni~v~~~Da~~~p~~ 250 (646)
.+++.++.+|||+|||+|..+..+++.. ...|+++|+++..++.+++++...|.. ++.+..+|+..++
T Consensus 85 ~~~~~~~~~vLDiGcG~G~~~~~la~~~---------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-- 153 (318)
T 2fk8_A 85 KLDLKPGMTLLDIGCGWGTTMRRAVERF---------DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA-- 153 (318)
T ss_dssp TSCCCTTCEEEEESCTTSHHHHHHHHHH---------CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC--
T ss_pred hcCCCCcCEEEEEcccchHHHHHHHHHC---------CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC--
Confidence 4567899999999999999999998875 248999999999999999999988875 5889999986653
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCc
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNP 327 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p 327 (646)
..||.|++.. ++..-++ .....+|..+.++|||||+|+.++.+...
T Consensus 154 -----------~~fD~v~~~~------~l~~~~~--------------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 154 -----------EPVDRIVSIE------AFEHFGH--------------ENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp -----------CCCSEEEEES------CGGGTCG--------------GGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred -----------CCcCEEEEeC------hHHhcCH--------------HHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 3699999752 2221111 11347899999999999999998877643
No 140
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.92 E-value=2.1e-09 Score=106.16 Aligned_cols=105 Identities=20% Similarity=0.154 Sum_probs=83.2
Q ss_pred cccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccc
Q psy17365 171 LLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNV 250 (646)
Q Consensus 171 ~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~ 250 (646)
..+.+.++.+|||+|||+|..+..+++. . +.|+++|+++..++.+++++...+ ++.++++|+.....
T Consensus 64 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~---------~-~~v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~d~~~~~~- 130 (231)
T 1vbf_A 64 DELDLHKGQKVLEIGTGIGYYTALIAEI---------V-DKVVSVEINEKMYNYASKLLSYYN--NIKLILGDGTLGYE- 130 (231)
T ss_dssp HHTTCCTTCEEEEECCTTSHHHHHHHHH---------S-SEEEEEESCHHHHHHHHHHHTTCS--SEEEEESCGGGCCG-
T ss_pred HhcCCCCCCEEEEEcCCCCHHHHHHHHH---------c-CEEEEEeCCHHHHHHHHHHHhhcC--CeEEEECCcccccc-
Confidence 3456789999999999999999999876 2 689999999999999999988777 88999999875211
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
....||.|+++.++... ...+.++|||||+|++++.+-
T Consensus 131 ---------~~~~fD~v~~~~~~~~~----------------------------~~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 131 ---------EEKPYDRVVVWATAPTL----------------------------LCKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp ---------GGCCEEEEEESSBBSSC----------------------------CHHHHHTEEEEEEEEEEECSS
T ss_pred ---------cCCCccEEEECCcHHHH----------------------------HHHHHHHcCCCcEEEEEEcCC
Confidence 12479999998664321 124678999999999987543
No 141
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.91 E-value=8.9e-09 Score=105.23 Aligned_cols=107 Identities=15% Similarity=0.128 Sum_probs=84.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEecCCCCCccccccCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS-PCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~-~ni~v~~~Da~~~p~~~~~~~ 255 (646)
++.+|||+|||+|..+..++.. ...|+++|+++..++.++++++..|. +++.++.+|+..++...
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~----------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~---- 133 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER----------GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHL---- 133 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT----------TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGC----
T ss_pred CCCEEEEeCCcchHHHHHHHHC----------CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhc----
Confidence 3679999999999999988865 35899999999999999999998888 68999999998876321
Q ss_pred CCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
...||.|++... +..-++. ..+|..+.++|||||+++.++.+
T Consensus 134 -----~~~fD~v~~~~~------l~~~~~~----------------~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 134 -----ETPVDLILFHAV------LEWVADP----------------RSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp -----SSCEEEEEEESC------GGGCSCH----------------HHHHHHHHHTEEEEEEEEEEEEB
T ss_pred -----CCCceEEEECch------hhcccCH----------------HHHHHHHHHHcCCCeEEEEEEeC
Confidence 257999998532 2222221 36899999999999999988753
No 142
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.91 E-value=5e-09 Score=106.33 Aligned_cols=110 Identities=14% Similarity=0.122 Sum_probs=89.0
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~ 252 (646)
..+.++.+|||+|||+|..+..+++.. +.+.|+++|+++..++.+++++...+.+++.+...|+..++.
T Consensus 33 ~~~~~~~~vLDiG~G~G~~~~~l~~~~--------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~--- 101 (276)
T 3mgg_A 33 TVYPPGAKVLEAGCGIGAQTVILAKNN--------PDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPF--- 101 (276)
T ss_dssp CCCCTTCEEEETTCTTSHHHHHHHHHC--------TTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCS---
T ss_pred ccCCCCCeEEEecCCCCHHHHHHHHhC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCC---
Confidence 345789999999999999999998874 467999999999999999999999999999999999987642
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
....||.|++... +..-++. ..+|..+.++|||||+++..+
T Consensus 102 -------~~~~fD~v~~~~~------l~~~~~~----------------~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 102 -------EDSSFDHIFVCFV------LEHLQSP----------------EEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp -------CTTCEEEEEEESC------GGGCSCH----------------HHHHHHHHHHEEEEEEEEEEE
T ss_pred -------CCCCeeEEEEech------hhhcCCH----------------HHHHHHHHHHcCCCcEEEEEE
Confidence 1257999997532 2211221 267899999999999999875
No 143
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.91 E-value=2e-09 Score=108.30 Aligned_cols=119 Identities=16% Similarity=0.213 Sum_probs=84.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHH------cCCCCeEEEecCCCC-C
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKR------LNSPCAIITNHDASV-M 247 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~r------lg~~ni~v~~~Da~~-~ 247 (646)
..++.+|||+|||.|..+..+|... +...|+|+|+++.+++.++++++. .+..|+.++.+|+.. +
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~--------p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l 115 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLF--------PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHL 115 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGS--------TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCH
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHC--------CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhh
Confidence 3567799999999999999998763 467899999999999999988765 467899999999986 3
Q ss_pred ccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcC
Q psy17365 248 PNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTC 323 (646)
Q Consensus 248 p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTC 323 (646)
+.... ...||.|++..| +|.. +-.... .. -.+..+|..+.++|||||.|+.+|+
T Consensus 116 ~~~~~--------~~~~D~v~~~~~---------dp~~--k~~h~k-rr--~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 116 PNFFY--------KGQLTKMFFLFP---------DPHF--KRTKHK-WR--IISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp HHHCC--------TTCEEEEEEESC---------C----------------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred hhhCC--------CcCeeEEEEeCC---------Cchh--hhhhhh-hh--hhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 32111 246999987654 1211 100000 00 1134789999999999999998875
No 144
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.91 E-value=1e-08 Score=99.01 Aligned_cols=107 Identities=10% Similarity=0.077 Sum_probs=82.9
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
+.++ +|||+|||+|..+..++.. ...|+++|+++..++.+++++...+. ++.+...|+..++.
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~----------~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~----- 90 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL----------GYEVTAVDQSSVGLAKAKQLAQEKGV-KITTVQSNLADFDI----- 90 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT----------TCEEEEECSSHHHHHHHHHHHHHHTC-CEEEECCBTTTBSC-----
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC----------CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcChhhcCC-----
Confidence 4577 9999999999999887753 34899999999999999999988776 78899999876541
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
....||.|++.. .. +. ......+|..+.++|||||+++.++.+.
T Consensus 91 -----~~~~fD~v~~~~-----~~----------~~-------~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 91 -----VADAWEGIVSIF-----CH----------LP-------SSLRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp -----CTTTCSEEEEEC-----CC----------CC-------HHHHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred -----CcCCccEEEEEh-----hc----------CC-------HHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 125799999731 11 10 1224578999999999999999987553
No 145
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.90 E-value=6.3e-09 Score=99.62 Aligned_cols=110 Identities=14% Similarity=-0.000 Sum_probs=85.5
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccc
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~ 251 (646)
+++..++.+|||+|||+|..+..+++. ...|+++|+++..++.++++++..+.+++.+...|+..++.
T Consensus 27 ~~~~~~~~~vLdiG~G~G~~~~~l~~~----------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-- 94 (199)
T 2xvm_A 27 AVKVVKPGKTLDLGCGNGRNSLYLAAN----------GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-- 94 (199)
T ss_dssp HTTTSCSCEEEEETCTTSHHHHHHHHT----------TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC--
T ss_pred HhhccCCCeEEEEcCCCCHHHHHHHHC----------CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC--
Confidence 445567889999999999999988764 34899999999999999999998888889999999877542
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
...||.|++... +...+ +. ....+|..+.++|||||++++.+
T Consensus 95 ---------~~~~D~v~~~~~------l~~~~-------~~-------~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 95 ---------DRQYDFILSTVV------LMFLE-------AK-------TIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp ---------CCCEEEEEEESC------GGGSC-------GG-------GHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ---------CCCceEEEEcch------hhhCC-------HH-------HHHHHHHHHHHhcCCCeEEEEEE
Confidence 257999997532 11111 11 12468999999999999987653
No 146
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.90 E-value=7.1e-09 Score=102.82 Aligned_cols=130 Identities=15% Similarity=0.128 Sum_probs=94.8
Q ss_pred CeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcC-CCCeEEEecCCCCCccccccCCCC
Q psy17365 179 HKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLN-SPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 179 ~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg-~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
.+|||+|||+|..+..++. ....|+++|+++..++.+++++...+ ..++.+..+|+..++.
T Consensus 68 ~~vLDiGcG~G~~~~~l~~----------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------- 129 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMAS----------PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP-------- 129 (235)
T ss_dssp EEEEEETCTTCHHHHHHCB----------TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC--------
T ss_pred CCEEEeCCCCCHHHHHHHh----------CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC--------
Confidence 4999999999999987754 25689999999999999999887653 3568999999987542
Q ss_pred CCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCcc-------cc
Q psy17365 258 NKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPL-------ED 330 (646)
Q Consensus 258 ~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~-------EN 330 (646)
...||.|++... +..-+ +. ....+|..+.++|||||+|+..+.+.... -.
T Consensus 130 ---~~~fD~v~~~~~------l~~~~-------~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~ 186 (235)
T 3lcc_A 130 ---TELFDLIFDYVF------FCAIE-------PE-------MRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVD 186 (235)
T ss_dssp ---SSCEEEEEEESS------TTTSC-------GG-------GHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCC
T ss_pred ---CCCeeEEEEChh------hhcCC-------HH-------HHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCC
Confidence 247999997422 11111 11 12478999999999999999876554322 24
Q ss_pred HHHHHHHHHHccCcEEEeecc
Q psy17365 331 EAVIQRLIVETQGAVQLVDVS 351 (646)
Q Consensus 331 E~VV~~~L~~~~~~~elv~~~ 351 (646)
.+.+..+|++.+ |+++.+.
T Consensus 187 ~~~~~~~l~~~G--f~~~~~~ 205 (235)
T 3lcc_A 187 VSTFEEVLVPIG--FKAVSVE 205 (235)
T ss_dssp HHHHHHHHGGGT--EEEEEEE
T ss_pred HHHHHHHHHHcC--CeEEEEE
Confidence 667888888775 6776654
No 147
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.89 E-value=9.8e-10 Score=109.88 Aligned_cols=123 Identities=10% Similarity=0.082 Sum_probs=90.2
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC-eEEEecCCCCC-cc
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC-AIITNHDASVM-PN 249 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n-i~v~~~Da~~~-p~ 249 (646)
++...++.+|||+|||+|..|..++..+. +.+.|+++|+++..++.+++++++.|..+ +.+..+|+... +.
T Consensus 55 l~~~~~~~~VLdiG~G~G~~~~~la~~~~-------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~ 127 (239)
T 2hnk_A 55 LTKISGAKRIIEIGTFTGYSSLCFASALP-------EDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQV 127 (239)
T ss_dssp HHHHHTCSEEEEECCTTCHHHHHHHHHSC-------TTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHH
T ss_pred HHHhhCcCEEEEEeCCCCHHHHHHHHhCC-------CCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHH
Confidence 34556788999999999999999998863 36799999999999999999999999876 88999998653 21
Q ss_pred cccc----CCCCCCCC--CCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcC
Q psy17365 250 VLYT----DADGNKVP--MKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTC 323 (646)
Q Consensus 250 ~~~~----~~~g~~~~--~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTC 323 (646)
.... ........ ..||.|++|.. .++ ...++..+.++|+|||+||..++
T Consensus 128 ~~~~~~~~~~~~~f~~~~~~fD~I~~~~~---------~~~----------------~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 128 LIDSKSAPSWASDFAFGPSSIDLFFLDAD---------KEN----------------YPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp HHHCSSCCGGGTTTCCSTTCEEEEEECSC---------GGG----------------HHHHHHHHHHHEEEEEEEEEECS
T ss_pred HHhhcccccccccccCCCCCcCEEEEeCC---------HHH----------------HHHHHHHHHHHcCCCeEEEEEcc
Confidence 1000 00000111 47999999843 001 12568899999999999999876
Q ss_pred CCC
Q psy17365 324 SLN 326 (646)
Q Consensus 324 Sl~ 326 (646)
.+.
T Consensus 183 ~~~ 185 (239)
T 2hnk_A 183 LWD 185 (239)
T ss_dssp SGG
T ss_pred ccC
Confidence 543
No 148
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.89 E-value=3.6e-09 Score=103.78 Aligned_cols=114 Identities=19% Similarity=0.188 Sum_probs=80.6
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHH----HHcCCCCeEEEecCCCCCc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQA----KRLNSPCAIITNHDASVMP 248 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~----~rlg~~ni~v~~~Da~~~p 248 (646)
+.++++.+|||+|||+|..+..+++.. +.+.|+|+|+++..++.+.+++ ...+.+++.+.++|+..++
T Consensus 23 l~~~~~~~vLDiGcG~G~~~~~la~~~--------p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~ 94 (218)
T 3mq2_A 23 LRSQYDDVVLDVGTGDGKHPYKVARQN--------PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLP 94 (218)
T ss_dssp HHTTSSEEEEEESCTTCHHHHHHHHHC--------TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCC
T ss_pred hhccCCCEEEEecCCCCHHHHHHHHHC--------CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCC
Confidence 457789999999999999999999863 5789999999999887654444 3467789999999998865
Q ss_pred cccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 249 NVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 249 ~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
.. ... |.|.+..+.... ......-+..+|.++.++|||||+++++.
T Consensus 95 ~~----------~~~-d~v~~~~~~~~~-----------------~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 95 PL----------SGV-GELHVLMPWGSL-----------------LRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp SC----------CCE-EEEEEESCCHHH-----------------HHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred CC----------CCC-CEEEEEccchhh-----------------hhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 21 123 666543331000 00000011468999999999999999853
No 149
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.88 E-value=7.9e-09 Score=100.05 Aligned_cols=121 Identities=14% Similarity=0.078 Sum_probs=88.5
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccccc
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYT 253 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~ 253 (646)
.+.++.+|||+|||+|..+..++.. +.+.|+++|+++..++.+++|+. ++.++++|+..++
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~---------~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~~----- 108 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL---------GAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEIS----- 108 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT---------TBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGCC-----
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc---------CCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHCC-----
Confidence 3557889999999999999988764 35689999999999999988765 6889999987653
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHH
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAV 333 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~V 333 (646)
..||.|++|+|..... . .....++.++++.+ |+ +|+.|+ + ...+.
T Consensus 109 --------~~~D~v~~~~p~~~~~-------------~-------~~~~~~l~~~~~~~--g~--~~~~~~--~-~~~~~ 153 (200)
T 1ne2_A 109 --------GKYDTWIMNPPFGSVV-------------K-------HSDRAFIDKAFETS--MW--IYSIGN--A-KARDF 153 (200)
T ss_dssp --------CCEEEEEECCCC---------------------------CHHHHHHHHHHE--EE--EEEEEE--G-GGHHH
T ss_pred --------CCeeEEEECCCchhcc-------------C-------chhHHHHHHHHHhc--Cc--EEEEEc--C-chHHH
Confidence 3699999999943211 0 11135788888887 33 677673 3 45567
Q ss_pred HHHHHHHccCcEEEee
Q psy17365 334 IQRLIVETQGAVQLVD 349 (646)
Q Consensus 334 V~~~L~~~~~~~elv~ 349 (646)
+..++.+.+ .++.+.
T Consensus 154 ~~~~~~~~g-~~~~~~ 168 (200)
T 1ne2_A 154 LRREFSARG-DVFREE 168 (200)
T ss_dssp HHHHHHHHE-EEEEEE
T ss_pred HHHHHHHCC-CEEEEE
Confidence 777888777 666654
No 150
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.88 E-value=9.1e-09 Score=104.99 Aligned_cols=114 Identities=12% Similarity=0.049 Sum_probs=87.0
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEecCCCCCcccccc
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS-PCAIITNHDASVMPNVLYT 253 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~-~ni~v~~~Da~~~p~~~~~ 253 (646)
+.++.+|||+|||+|..+..++.. +.+.|+++|+++..++.+++++...+. .++.++.+|+..++..
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~---------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--- 129 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA---------GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMD--- 129 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH---------TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCC---
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC---------CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccC---
Confidence 467889999999999999887765 356899999999999999999988876 4688999998775420
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
....||.|++... +.. ...-......+|..+.++|||||+|+.++++
T Consensus 130 ------~~~~fD~v~~~~~------l~~------------~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 130 ------LGKEFDVISSQFS------FHY------------AFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp ------CSSCEEEEEEESC------GGG------------GGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ------CCCCcCEEEECch------hhh------------hcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 1257999998632 100 0001123457899999999999999998755
No 151
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.87 E-value=2.6e-09 Score=113.22 Aligned_cols=123 Identities=15% Similarity=0.165 Sum_probs=94.4
Q ss_pred ccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCC
Q psy17365 168 IPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVM 247 (646)
Q Consensus 168 l~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~ 247 (646)
+....+.+.++.+|||+|||+|..+..++... +...|+++|+++..++.+++++...+.. +.+...|+..+
T Consensus 187 ~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~--------~~~~v~~vD~s~~~l~~a~~~~~~~~~~-~~~~~~d~~~~ 257 (343)
T 2pjd_A 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHS--------PKIRLTLCDVSAPAVEASRATLAANGVE-GEVFASNVFSE 257 (343)
T ss_dssp HHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHC--------TTCBCEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTT
T ss_pred HHHHhcCcCCCCeEEEecCccCHHHHHHHHHC--------CCCEEEEEECCHHHHHHHHHHHHHhCCC-CEEEEcccccc
Confidence 33334556678899999999999999998763 4568999999999999999999988875 56677887553
Q ss_pred ccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCc
Q psy17365 248 PNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNP 327 (646)
Q Consensus 248 p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p 327 (646)
+ ...||.|++++|... |. ........+++..+.++|||||.++..+.+..+
T Consensus 258 ~------------~~~fD~Iv~~~~~~~-g~----------------~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 308 (343)
T 2pjd_A 258 V------------KGRFDMIISNPPFHD-GM----------------QTSLDAAQTLIRGAVRHLNSGGELRIVANAFLP 308 (343)
T ss_dssp C------------CSCEEEEEECCCCCS-SS----------------HHHHHHHHHHHHHHGGGEEEEEEEEEEEETTSS
T ss_pred c------------cCCeeEEEECCCccc-Cc----------------cCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCC
Confidence 2 247999999988532 11 001223457899999999999999999888765
Q ss_pred c
Q psy17365 328 L 328 (646)
Q Consensus 328 ~ 328 (646)
.
T Consensus 309 ~ 309 (343)
T 2pjd_A 309 Y 309 (343)
T ss_dssp H
T ss_pred c
Confidence 4
No 152
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.87 E-value=3.4e-08 Score=93.69 Aligned_cols=130 Identities=14% Similarity=0.024 Sum_probs=93.8
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
+.++.+|||+|||+|..+..++.. ...|+++|+++..++.++++. +++.+.+.|+..++.
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~----------~~~v~~~D~~~~~~~~a~~~~-----~~~~~~~~d~~~~~~----- 103 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ----------GHDVLGTDLDPILIDYAKQDF-----PEARWVVGDLSVDQI----- 103 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT----------TCEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTSCC-----
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC----------CCcEEEEcCCHHHHHHHHHhC-----CCCcEEEcccccCCC-----
Confidence 458889999999999999988764 348999999999998887764 457888889876531
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHHH
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAVI 334 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~VV 334 (646)
....||.|++++++-. ... ......+|..+.++|+|||+++.++.+... -....+
T Consensus 104 -----~~~~~D~i~~~~~~~~------------~~~-------~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~-~~~~~~ 158 (195)
T 3cgg_A 104 -----SETDFDLIVSAGNVMG------------FLA-------EDGREPALANIHRALGADGRAVIGFGAGRG-WVFGDF 158 (195)
T ss_dssp -----CCCCEEEEEECCCCGG------------GSC-------HHHHHHHHHHHHHHEEEEEEEEEEEETTSS-CCHHHH
T ss_pred -----CCCceeEEEECCcHHh------------hcC-------hHHHHHHHHHHHHHhCCCCEEEEEeCCCCC-cCHHHH
Confidence 1247999998644211 001 012357899999999999999987655432 345567
Q ss_pred HHHHHHccCcEEEeecc
Q psy17365 335 QRLIVETQGAVQLVDVS 351 (646)
Q Consensus 335 ~~~L~~~~~~~elv~~~ 351 (646)
..+|++.+ ++++...
T Consensus 159 ~~~l~~~G--f~~~~~~ 173 (195)
T 3cgg_A 159 LEVAERVG--LELENAF 173 (195)
T ss_dssp HHHHHHHT--EEEEEEE
T ss_pred HHHHHHcC--CEEeeee
Confidence 77777775 6766553
No 153
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.87 E-value=2.3e-09 Score=110.12 Aligned_cols=113 Identities=12% Similarity=0.099 Sum_probs=88.6
Q ss_pred cccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccc
Q psy17365 171 LLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNV 250 (646)
Q Consensus 171 ~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~ 250 (646)
.++.+.++.+|||+|||+|..+..+++.+. +...|+++|+++..+..+++++...+. ++.+...|+..++.
T Consensus 16 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-------~~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~- 86 (284)
T 3gu3_A 16 TVWKITKPVHIVDYGCGYGYLGLVLMPLLP-------EGSKYTGIDSGETLLAEARELFRLLPY-DSEFLEGDATEIEL- 86 (284)
T ss_dssp TTSCCCSCCEEEEETCTTTHHHHHHTTTSC-------TTCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEESCTTTCCC-
T ss_pred HHhccCCCCeEEEecCCCCHHHHHHHHhCC-------CCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcchhhcCc-
Confidence 345567889999999999999999887642 246899999999999999999887765 79999999987642
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
...||.|++... +..-++. ..+|.++.++|||||+|+..++.
T Consensus 87 ----------~~~fD~v~~~~~------l~~~~~~----------------~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 87 ----------NDKYDIAICHAF------LLHMTTP----------------ETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp ----------SSCEEEEEEESC------GGGCSSH----------------HHHHHHHHHTEEEEEEEEEEECC
T ss_pred ----------CCCeeEEEECCh------hhcCCCH----------------HHHHHHHHHHcCCCCEEEEEecc
Confidence 247999998532 2211221 37899999999999999987655
No 154
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.86 E-value=1e-08 Score=102.23 Aligned_cols=135 Identities=14% Similarity=0.056 Sum_probs=98.0
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
..++.+|||+|||+|..+..+++. ....|+++|+++..++.+++++...+..++.+...|+..++.
T Consensus 77 ~~~~~~vLDiGcG~G~~~~~l~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~----- 142 (241)
T 2ex4_A 77 KTGTSCALDCGAGIGRITKRLLLP---------LFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTP----- 142 (241)
T ss_dssp CCCCSEEEEETCTTTHHHHHTTTT---------TCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCC-----
T ss_pred CCCCCEEEEECCCCCHHHHHHHHh---------cCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCC-----
Confidence 457889999999999999887754 245899999999999999998877765678889999876542
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCc-------
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNP------- 327 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p------- 327 (646)
....||.|+++. ++..-++ .....+|..+.++|||||+|+.++.....
T Consensus 143 -----~~~~fD~v~~~~------~l~~~~~--------------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~ 197 (241)
T 2ex4_A 143 -----EPDSYDVIWIQW------VIGHLTD--------------QHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDV 197 (241)
T ss_dssp -----CSSCEEEEEEES------CGGGSCH--------------HHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETT
T ss_pred -----CCCCEEEEEEcc------hhhhCCH--------------HHHHHHHHHHHHhcCCCeEEEEEEccCCCcceeccc
Confidence 124799999763 1221111 12247899999999999999987643221
Q ss_pred ----cccHHHHHHHHHHccCcEEEeec
Q psy17365 328 ----LEDEAVIQRLIVETQGAVQLVDV 350 (646)
Q Consensus 328 ----~ENE~VV~~~L~~~~~~~elv~~ 350 (646)
.-+.+-+..+|++.+ |+++.+
T Consensus 198 ~~~~~~~~~~~~~~l~~aG--f~~~~~ 222 (241)
T 2ex4_A 198 DSSVCRDLDVVRRIICSAG--LSLLAE 222 (241)
T ss_dssp TTEEEEBHHHHHHHHHHTT--CCEEEE
T ss_pred CCcccCCHHHHHHHHHHcC--CeEEEe
Confidence 115677888888876 555554
No 155
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.85 E-value=1.5e-08 Score=99.20 Aligned_cols=108 Identities=19% Similarity=0.117 Sum_probs=83.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCC
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~ 255 (646)
.++.+|||+|||+|..+..++... . .|+++|+++..++.++++++..+ .++.++++|+..++.
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~---------~-~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~------ 99 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYG---------F-EVVGVDISEDMIRKAREYAKSRE-SNVEFIVGDARKLSF------ 99 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTT---------C-EEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCTTSCCS------
T ss_pred CCCCeEEEEeccCCHHHHHHHHcC---------C-EEEEEECCHHHHHHHHHHHHhcC-CCceEEECchhcCCC------
Confidence 347899999999999998887641 2 89999999999999999998877 778999999876541
Q ss_pred CCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
....||.|++..+.. + +.. .....+|.++.++|||||+++.+++.
T Consensus 100 ----~~~~~D~v~~~~~~~----~---------~~~-------~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 100 ----EDKTFDYVIFIDSIV----H---------FEP-------LELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp ----CTTCEEEEEEESCGG----G---------CCH-------HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ----CCCcEEEEEEcCchH----h---------CCH-------HHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 124799999875410 0 010 11247899999999999999988664
No 156
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.85 E-value=6.1e-09 Score=117.30 Aligned_cols=172 Identities=13% Similarity=0.152 Sum_probs=115.0
Q ss_pred ccccEEEecccccccccccC----CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHH
Q psy17365 155 ATGHISRQEAVSMIPPLLLD----VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAK 230 (646)
Q Consensus 155 ~~G~i~~Qd~~Sml~~~~Ld----~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~ 230 (646)
+.|.++--...+.+.+.++. +.++.+|||.|||+|+..+.+++.+.. .+...++|+|+++..+.+++.|+.
T Consensus 195 ~~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~-----~~~~~i~G~Eid~~~~~lA~~Nl~ 269 (542)
T 3lkd_A 195 KAGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQ-----PQTVVYFGQELNTSTYNLARMNMI 269 (542)
T ss_dssp CCSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSC-----TTTCEEEEEESCHHHHHHHHHHHH
T ss_pred cCCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHh-----ccCceEEEEECcHHHHHHHHHHHH
Confidence 35666665555555556665 678999999999999999999887631 135689999999999999999998
Q ss_pred HcCC--CCeEEEecCCCCC--ccccccCCCCCCCCCCCCeeecCCCCCCCcccccCcccc--ccCCcch-hhhhHHHHHH
Q psy17365 231 RLNS--PCAIITNHDASVM--PNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIW--TKWTPSN-GNNLHGIQYR 303 (646)
Q Consensus 231 rlg~--~ni~v~~~Da~~~--p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~--~~w~~~~-~~~l~~lQ~~ 303 (646)
..|+ .++.+.++|.... |.. ....||+|+++||.++... ...... .+|..-. ...-...+..
T Consensus 270 l~gi~~~~~~I~~gDtL~~d~p~~---------~~~~fD~IvaNPPf~~~~~--~~~~~~~d~rf~~~G~~~~~s~~~~~ 338 (542)
T 3lkd_A 270 LHGVPIENQFLHNADTLDEDWPTQ---------EPTNFDGVLMNPPYSAKWS--ASSGFMDDPRFSPFGKLAPKSKADFA 338 (542)
T ss_dssp HTTCCGGGEEEEESCTTTSCSCCS---------SCCCBSEEEECCCTTCCCC--CCGGGGGSTTTGGGSSCCCTTCCHHH
T ss_pred HcCCCcCccceEecceeccccccc---------ccccccEEEecCCcCCccc--cchhhhhhhhhhhhhhcCCCchhhHH
Confidence 8888 5788899997654 221 1257999999999985421 111100 0121100 1111223446
Q ss_pred HHHHHHHhhc-cCCeEEEEcCC--CCccccHHHHHHHHHHcc
Q psy17365 304 IVKRGVEMLA-VGGKIAYSTCS--LNPLEDEAVIQRLIVETQ 342 (646)
Q Consensus 304 IL~~A~~lLK-pGG~LVYSTCS--l~p~ENE~VV~~~L~~~~ 342 (646)
.+.+++++|+ +||++++.+-. +...-.+.-+.+.|-+..
T Consensus 339 Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~Lle~~ 380 (542)
T 3lkd_A 339 FLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIRKALLEEG 380 (542)
T ss_dssp HHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCceeEEEEecchHhhCCchhHHHHHHHHhCC
Confidence 8999999999 99998766433 222222566666665554
No 157
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.85 E-value=6.2e-09 Score=100.75 Aligned_cols=122 Identities=14% Similarity=0.073 Sum_probs=86.9
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCC
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~ 255 (646)
.++.+|||+|||+|..+..++.. +...|+++|+++..++.+++++.. .+++.+..+|+..++.
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~---------~~~~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~~~------ 103 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLG---------GFPNVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKLDF------ 103 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHT---------TCCCEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSCCS------
T ss_pred CCCCeEEEECCCCcHHHHHHHHc---------CCCcEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcCCC------
Confidence 67889999999999999988865 123899999999999999888764 4578899999877531
Q ss_pred CCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
....||.|++..+....- ..++. .|... .........+|..+.++|||||++++++.+.
T Consensus 104 ----~~~~fD~v~~~~~~~~~~--~~~~~---~~~~~--~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 104 ----PSASFDVVLEKGTLDALL--AGERD---PWTVS--SEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp ----CSSCEEEEEEESHHHHHT--TTCSC---TTSCC--HHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred ----CCCcccEEEECcchhhhc--ccccc---ccccc--cchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 125799999875532110 01111 23221 1122344688999999999999999987654
No 158
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.85 E-value=1.9e-08 Score=97.22 Aligned_cols=127 Identities=10% Similarity=0.081 Sum_probs=93.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
+.+|||+|||+|..+..+++. ...|+++|+++..++.++++ .+++.++++|+..++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~----------~~~v~gvD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~-------- 98 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL----------GHQIEGLEPATRLVELARQT-----HPSVTFHHGTITDLSD-------- 98 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT----------TCCEEEECCCHHHHHHHHHH-----CTTSEEECCCGGGGGG--------
T ss_pred CCeEEEecCCCCHHHHHHHhc----------CCeEEEEeCCHHHHHHHHHh-----CCCCeEEeCccccccc--------
Confidence 779999999999999988765 24799999999998888765 4578899999877642
Q ss_pred CCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCc----------
Q psy17365 258 NKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNP---------- 327 (646)
Q Consensus 258 ~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p---------- 327 (646)
....||.|++.. ++..-+ .. ....+|.++.++|||||+++.++..-..
T Consensus 99 --~~~~fD~v~~~~------~l~~~~-------~~-------~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~ 156 (203)
T 3h2b_A 99 --SPKRWAGLLAWY------SLIHMG-------PG-------ELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVAT 156 (203)
T ss_dssp --SCCCEEEEEEES------SSTTCC-------TT-------THHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSC
T ss_pred --CCCCeEEEEehh------hHhcCC-------HH-------HHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhh
Confidence 125799999842 222111 00 1247899999999999999988765432
Q ss_pred --cccHHHHHHHHHHccCcEEEeecc
Q psy17365 328 --LEDEAVIQRLIVETQGAVQLVDVS 351 (646)
Q Consensus 328 --~ENE~VV~~~L~~~~~~~elv~~~ 351 (646)
.-...-+..+|++.+ |+++.+.
T Consensus 157 ~~~~~~~~~~~~l~~~G--f~~~~~~ 180 (203)
T 3h2b_A 157 AYRWPLPELAQALETAG--FQVTSSH 180 (203)
T ss_dssp EEECCHHHHHHHHHHTT--EEEEEEE
T ss_pred hccCCHHHHHHHHHHCC--CcEEEEE
Confidence 124667788888876 7777654
No 159
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.84 E-value=1.1e-08 Score=102.27 Aligned_cols=106 Identities=15% Similarity=0.222 Sum_probs=82.9
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~ 252 (646)
+.+.++.+|||+|||+|..+..+++.. +.+.|+++|+++..++.++++ .+++.+..+|+..++.
T Consensus 29 ~~~~~~~~vLdiG~G~G~~~~~l~~~~--------~~~~v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~--- 92 (259)
T 2p35_A 29 VPLERVLNGYDLGCGPGNSTELLTDRY--------GVNVITGIDSDDDMLEKAADR-----LPNTNFGKADLATWKP--- 92 (259)
T ss_dssp CCCSCCSSEEEETCTTTHHHHHHHHHH--------CTTSEEEEESCHHHHHHHHHH-----STTSEEEECCTTTCCC---
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHhC--------CCCEEEEEECCHHHHHHHHHh-----CCCcEEEECChhhcCc---
Confidence 456788999999999999999999875 467899999999999888776 4678899999877641
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
...||.|++... +..-++ ...+|.++.++|||||+|+.++..
T Consensus 93 --------~~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 93 --------AQKADLLYANAV------FQWVPD----------------HLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp --------SSCEEEEEEESC------GGGSTT----------------HHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred --------cCCcCEEEEeCc------hhhCCC----------------HHHHHHHHHHhcCCCeEEEEEeCC
Confidence 257999998432 111111 236899999999999999998754
No 160
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.84 E-value=3.6e-09 Score=100.65 Aligned_cols=126 Identities=16% Similarity=0.111 Sum_probs=86.6
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCC
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~ 255 (646)
.++.+|||+|||+|..+..++.. . .|+|+|+|+..++. ..++.+.++|+.....
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~----------~-~v~gvD~s~~~~~~---------~~~~~~~~~d~~~~~~------ 75 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKR----------N-TVVSTDLNIRALES---------HRGGNLVRADLLCSIN------ 75 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTT----------S-EEEEEESCHHHHHT---------CSSSCEEECSTTTTBC------
T ss_pred CCCCeEEEeccCccHHHHHHHhc----------C-cEEEEECCHHHHhc---------ccCCeEEECChhhhcc------
Confidence 56789999999999999887643 2 99999999998776 4578899999876211
Q ss_pred CCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHHHH
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAVIQ 335 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~VV~ 335 (646)
...||.|++++|...... +.. |... . ....++.+.++.+ |||+++.++.+. .+...+.
T Consensus 76 -----~~~fD~i~~n~~~~~~~~----~~~---~~~~--~----~~~~~~~~~~~~l-pgG~l~~~~~~~---~~~~~l~ 133 (170)
T 3q87_B 76 -----QESVDVVVFNPPYVPDTD----DPI---IGGG--Y----LGREVIDRFVDAV-TVGMLYLLVIEA---NRPKEVL 133 (170)
T ss_dssp -----GGGCSEEEECCCCBTTCC----CTT---TBCC--G----GGCHHHHHHHHHC-CSSEEEEEEEGG---GCHHHHH
T ss_pred -----cCCCCEEEECCCCccCCc----ccc---ccCC--c----chHHHHHHHHhhC-CCCEEEEEEecC---CCHHHHH
Confidence 157999999998543221 100 1000 0 0124667777777 999999887554 5566777
Q ss_pred HHHHHccCcEEEeecc
Q psy17365 336 RLIVETQGAVQLVDVS 351 (646)
Q Consensus 336 ~~L~~~~~~~elv~~~ 351 (646)
++|++.+ ++.+.+.
T Consensus 134 ~~l~~~g--f~~~~~~ 147 (170)
T 3q87_B 134 ARLEERG--YGTRILK 147 (170)
T ss_dssp HHHHHTT--CEEEEEE
T ss_pred HHHHHCC--CcEEEEE
Confidence 7888775 4554443
No 161
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.84 E-value=2e-08 Score=99.45 Aligned_cols=130 Identities=15% Similarity=0.135 Sum_probs=94.2
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
+.++.+|||+|||+|..+..+++. ...|+++|+++..++.++++. ...++.++.+|+..++.
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~----------~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~----- 112 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT----------GYKAVGVDISEVMIQKGKERG---EGPDLSFIKGDLSSLPF----- 112 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT----------TCEEEEEESCHHHHHHHHTTT---CBTTEEEEECBTTBCSS-----
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc----------CCeEEEEECCHHHHHHHHhhc---ccCCceEEEcchhcCCC-----
Confidence 457889999999999999988865 348999999999988877653 45678999999887642
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCcc------
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPL------ 328 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~------ 328 (646)
....||.|++.. ++..-++. ..+|..+.++|+|||+++.++.+....
T Consensus 113 -----~~~~fD~v~~~~------~l~~~~~~----------------~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~ 165 (242)
T 3l8d_A 113 -----ENEQFEAIMAIN------SLEWTEEP----------------LRALNEIKRVLKSDGYACIAILGPTAKPRENSY 165 (242)
T ss_dssp -----CTTCEEEEEEES------CTTSSSCH----------------HHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGG
T ss_pred -----CCCCccEEEEcC------hHhhccCH----------------HHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhh
Confidence 125799999742 22222221 367999999999999999987443221
Q ss_pred ------------ccHHHHHHHHHHccCcEEEeecc
Q psy17365 329 ------------EDEAVIQRLIVETQGAVQLVDVS 351 (646)
Q Consensus 329 ------------ENE~VV~~~L~~~~~~~elv~~~ 351 (646)
-....+..+|++.+ |++++..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~l~~~G--f~~~~~~ 198 (242)
T 3l8d_A 166 PRLYGKDVVCNTMMPWEFEQLVKEQG--FKVVDGI 198 (242)
T ss_dssp GGGGTCCCSSCCCCHHHHHHHHHHTT--EEEEEEE
T ss_pred hhhccccccccCCCHHHHHHHHHHcC--CEEEEee
Confidence 12345677777775 7777654
No 162
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.83 E-value=2.4e-08 Score=99.60 Aligned_cols=134 Identities=14% Similarity=0.102 Sum_probs=96.5
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccccc
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYT 253 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~ 253 (646)
...++.+|||+|||+|..+..+++.. ...|+++|+++..++.+++++... .++.+..+|+..++.
T Consensus 90 ~~~~~~~vLDiG~G~G~~~~~l~~~~---------~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~---- 154 (254)
T 1xtp_A 90 PGHGTSRALDCGAGIGRITKNLLTKL---------YATTDLLEPVKHMLEEAKRELAGM--PVGKFILASMETATL---- 154 (254)
T ss_dssp TTCCCSEEEEETCTTTHHHHHTHHHH---------CSEEEEEESCHHHHHHHHHHTTTS--SEEEEEESCGGGCCC----
T ss_pred cccCCCEEEEECCCcCHHHHHHHHhh---------cCEEEEEeCCHHHHHHHHHHhccC--CceEEEEccHHHCCC----
Confidence 45678999999999999999988763 357999999999999998876654 678899999876541
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCc------
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNP------ 327 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p------ 327 (646)
....||.|++.. ++..-++ .....+|.++.++|||||+|+.++.....
T Consensus 155 ------~~~~fD~v~~~~------~l~~~~~--------------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~ 208 (254)
T 1xtp_A 155 ------PPNTYDLIVIQW------TAIYLTD--------------ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVD 208 (254)
T ss_dssp ------CSSCEEEEEEES------CGGGSCH--------------HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEE
T ss_pred ------CCCCeEEEEEcc------hhhhCCH--------------HHHHHHHHHHHHhcCCCeEEEEEecCCCcccceec
Confidence 125799999732 1111111 12457899999999999999998743211
Q ss_pred ------cccHHHHHHHHHHccCcEEEeec
Q psy17365 328 ------LEDEAVIQRLIVETQGAVQLVDV 350 (646)
Q Consensus 328 ------~ENE~VV~~~L~~~~~~~elv~~ 350 (646)
.-..+.+..+|++.+ |+++.+
T Consensus 209 ~~~~~~~~~~~~~~~~l~~aG--f~~~~~ 235 (254)
T 1xtp_A 209 KEDSSLTRSDIHYKRLFNESG--VRVVKE 235 (254)
T ss_dssp TTTTEEEBCHHHHHHHHHHHT--CCEEEE
T ss_pred ccCCcccCCHHHHHHHHHHCC--CEEEEe
Confidence 124567788888876 455544
No 163
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.83 E-value=5.3e-09 Score=108.00 Aligned_cols=112 Identities=14% Similarity=0.153 Sum_probs=83.9
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHc--C---------CCCeEEEecCC
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRL--N---------SPCAIITNHDA 244 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rl--g---------~~ni~v~~~Da 244 (646)
.++.+|||+|||+|+.+..++.. +.+.|+++|+|+..++.+++++ ++ + .+++.++.+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~---------~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~ 143 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH---------DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDG 143 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS---------CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC---------CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECch
Confidence 35679999999999999888754 3579999999999999999988 54 2 36789999998
Q ss_pred CCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 245 SVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 245 ~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
..+... ...||.|++|+|+. .|. +. .+ .+.+++..+.++|+|||+++..+++
T Consensus 144 ~~~l~~----------~~~fD~Ii~d~~~~-~~~----~~-----------~l--~~~~~l~~~~~~L~pgG~lv~~~~~ 195 (281)
T 1mjf_A 144 FEFIKN----------NRGFDVIIADSTDP-VGP----AK-----------VL--FSEEFYRYVYDALNNPGIYVTQAGS 195 (281)
T ss_dssp HHHHHH----------CCCEEEEEEECCCC-C--------------------T--TSHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HHHhcc----------cCCeeEEEECCCCC-CCc----ch-----------hh--hHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 654211 14799999999852 121 00 00 1246788999999999999998766
Q ss_pred C
Q psy17365 325 L 325 (646)
Q Consensus 325 l 325 (646)
.
T Consensus 196 ~ 196 (281)
T 1mjf_A 196 V 196 (281)
T ss_dssp T
T ss_pred c
Confidence 4
No 164
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.83 E-value=1.8e-08 Score=98.47 Aligned_cols=109 Identities=14% Similarity=0.145 Sum_probs=82.1
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccccc
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYT 253 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~ 253 (646)
.+.++.+|||+|||+|..+..+++. ...|+++|+++..++.+++++. .++.+.++|+..++.
T Consensus 42 ~~~~~~~vLDiGcG~G~~~~~l~~~----------~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~~~---- 103 (220)
T 3hnr_A 42 VNKSFGNVLEFGVGTGNLTNKLLLA----------GRTVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSFEV---- 103 (220)
T ss_dssp HHTCCSEEEEECCTTSHHHHHHHHT----------TCEEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSCCC----
T ss_pred hccCCCeEEEeCCCCCHHHHHHHhC----------CCeEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhcCC----
Confidence 3458889999999999999988764 3589999999999888877644 578899999887642
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCc
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNP 327 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p 327 (646)
. ..||.|++... +..-++. .+..+|.++.++|||||.++.++..+..
T Consensus 104 ------~-~~fD~v~~~~~------l~~~~~~--------------~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 150 (220)
T 3hnr_A 104 ------P-TSIDTIVSTYA------FHHLTDD--------------EKNVAIAKYSQLLNKGGKIVFADTIFAD 150 (220)
T ss_dssp ------C-SCCSEEEEESC------GGGSCHH--------------HHHHHHHHHHHHSCTTCEEEEEEECBSS
T ss_pred ------C-CCeEEEEECcc------hhcCChH--------------HHHHHHHHHHHhcCCCCEEEEEeccccC
Confidence 1 57999998532 2221211 1245899999999999999998755443
No 165
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.82 E-value=8.3e-09 Score=100.96 Aligned_cols=114 Identities=11% Similarity=0.007 Sum_probs=82.8
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHH------------cCCCCeEEEe
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKR------------LNSPCAIITN 241 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~r------------lg~~ni~v~~ 241 (646)
.+.++.+|||+|||+|..+..+|+. ...|+|+|+|+..++.++++.+. .+..++.+.+
T Consensus 19 ~~~~~~~vLD~GCG~G~~~~~la~~----------g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 88 (203)
T 1pjz_A 19 NVVPGARVLVPLCGKSQDMSWLSGQ----------GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWC 88 (203)
T ss_dssp CCCTTCEEEETTTCCSHHHHHHHHH----------CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEE
T ss_pred ccCCCCEEEEeCCCCcHhHHHHHHC----------CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEE
Confidence 4568899999999999999999875 24899999999999998876542 1246789999
Q ss_pred cCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 242 HDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 242 ~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
+|+..++... ...||.|++-. ++..-| .......+.++.++|||||++++.
T Consensus 89 ~d~~~l~~~~---------~~~fD~v~~~~------~l~~l~--------------~~~~~~~l~~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 89 GDFFALTARD---------IGHCAAFYDRA------AMIALP--------------ADMRERYVQHLEALMPQACSGLLI 139 (203)
T ss_dssp ECCSSSTHHH---------HHSEEEEEEES------CGGGSC--------------HHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred CccccCCccc---------CCCEEEEEECc------chhhCC--------------HHHHHHHHHHHHHHcCCCcEEEEE
Confidence 9998875311 14699998622 111111 012346789999999999997767
Q ss_pred cCCCC
Q psy17365 322 TCSLN 326 (646)
Q Consensus 322 TCSl~ 326 (646)
|+.+.
T Consensus 140 ~~~~~ 144 (203)
T 1pjz_A 140 TLEYD 144 (203)
T ss_dssp EESSC
T ss_pred EEecC
Confidence 66553
No 166
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.82 E-value=7.1e-09 Score=106.97 Aligned_cols=115 Identities=14% Similarity=0.115 Sum_probs=87.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHc--CCCCeEEEecCCCCCcccccc
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRL--NSPCAIITNHDASVMPNVLYT 253 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rl--g~~ni~v~~~Da~~~p~~~~~ 253 (646)
.++.+|||+|||+|..+..+++.+. +...|+|+|+++..++.++++++.. +..++.+.++|+..++...
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~-------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~-- 105 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELK-------PFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLG-- 105 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSS-------CCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGC--
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC-------CCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccc--
Confidence 4789999999999999999998652 4679999999999999999999886 3578999999998765211
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
.. ......||.|++... +. |- -...+|..+.++|||||+|+..+++
T Consensus 106 -~~-~~~~~~fD~V~~~~~------l~--------~~---------~~~~~l~~~~~~LkpgG~l~i~~~~ 151 (299)
T 3g5t_A 106 -AD-SVDKQKIDMITAVEC------AH--------WF---------DFEKFQRSAYANLRKDGTIAIWGYA 151 (299)
T ss_dssp -TT-TTTSSCEEEEEEESC------GG--------GS---------CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred -cc-cccCCCeeEEeHhhH------HH--------Hh---------CHHHHHHHHHHhcCCCcEEEEEecC
Confidence 00 011257999998432 11 10 1237899999999999999986554
No 167
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.81 E-value=1e-08 Score=106.80 Aligned_cols=113 Identities=13% Similarity=0.114 Sum_probs=82.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHc-----CCCCeEEEecCCCCCcccc
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRL-----NSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rl-----g~~ni~v~~~Da~~~p~~~ 251 (646)
+..+|||+|||.|+.+..++... +...|+++|+|+..++.+++++..+ ..+++.++.+|+..+...
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~--------~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~- 153 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHK--------NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ- 153 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCT--------TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---C-
T ss_pred CCCEEEEEeCChhHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhh-
Confidence 45799999999999998887642 3578999999999999999998765 346899999999776421
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
....||+|++|+|... | |.. .-...++++.+.+.|+|||+||..++|
T Consensus 154 --------~~~~fDvIi~D~~~p~-~-----~~~------------~l~~~~f~~~~~~~LkpgG~lv~~~~s 200 (294)
T 3adn_A 154 --------TSQTFDVIISDCTDPI-G-----PGE------------SLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp --------CCCCEEEEEECC----------------------------CCHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred --------cCCCccEEEECCCCcc-C-----cch------------hccHHHHHHHHHHhcCCCCEEEEecCC
Confidence 1257999999987311 1 110 001246888999999999999987655
No 168
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.81 E-value=1.2e-08 Score=108.39 Aligned_cols=125 Identities=12% Similarity=0.045 Sum_probs=92.7
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEecCCCCCcccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS-PCAIITNHDASVMPNVL 251 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~-~ni~v~~~Da~~~p~~~ 251 (646)
+...++.+|||+|||+|..+..+++. +.+.|+|+|+++ .+..++++++..|. .++.++.+|+..++.
T Consensus 46 l~~~~~~~VLDiGcGtG~ls~~la~~---------g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~-- 113 (348)
T 2y1w_A 46 HTDFKDKIVLDVGCGSGILSFFAAQA---------GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL-- 113 (348)
T ss_dssp GGGTTTCEEEEETCTTSHHHHHHHHT---------TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC--
T ss_pred cccCCcCEEEEcCCCccHHHHHHHhC---------CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCC--
Confidence 34568899999999999999888764 356999999996 77889999999888 679999999876531
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCC--ccc
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLN--PLE 329 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~--p~E 329 (646)
..+||+|+++.+....+ +++ ....+..+.++|||||+++.+++++. +.+
T Consensus 114 ---------~~~~D~Ivs~~~~~~~~----~~~----------------~~~~l~~~~~~LkpgG~li~~~~~~~~~~i~ 164 (348)
T 2y1w_A 114 ---------PEQVDIIISEPMGYMLF----NER----------------MLESYLHAKKYLKPSGNMFPTIGDVHLAPFT 164 (348)
T ss_dssp ---------SSCEEEEEECCCBTTBT----TTS----------------HHHHHHHGGGGEEEEEEEESCEEEEEEEEEC
T ss_pred ---------CCceeEEEEeCchhcCC----hHH----------------HHHHHHHHHhhcCCCeEEEEecCcEEEEEec
Confidence 14799999986522111 111 12456778899999999998877753 566
Q ss_pred cHHHHHHHH
Q psy17365 330 DEAVIQRLI 338 (646)
Q Consensus 330 NE~VV~~~L 338 (646)
.+..-.+.+
T Consensus 165 ~~~~~~~~~ 173 (348)
T 2y1w_A 165 DEQLYMEQF 173 (348)
T ss_dssp CHHHHHHHH
T ss_pred chHHhhhhc
Confidence 665544444
No 169
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.81 E-value=3.4e-08 Score=99.93 Aligned_cols=116 Identities=16% Similarity=0.133 Sum_probs=84.5
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHH------HHHHHHHHHHHcCC-CCeEEEecC-
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNN------RCYMLVHQAKRLNS-PCAIITNHD- 243 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~------Rl~~L~~n~~rlg~-~ni~v~~~D- 243 (646)
.+++.++.+|||+|||+|..+..+++..+ +.+.|+++|+++. .++.++++++..+. +++.+...|
T Consensus 38 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~g-------~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 110 (275)
T 3bkx_A 38 AWQVKPGEKILEIGCGQGDLSAVLADQVG-------SSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTN 110 (275)
T ss_dssp HHTCCTTCEEEEESCTTSHHHHHHHHHHC-------TTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCC
T ss_pred HcCCCCCCEEEEeCCCCCHHHHHHHHHhC-------CCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECCh
Confidence 45678999999999999999999998763 4579999999997 88999999988877 578898888
Q ss_pred --CCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 244 --ASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 244 --a~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
...++ .....||.|++..+ +...++. ..++.....+++|||+++.+
T Consensus 111 ~~~~~~~----------~~~~~fD~v~~~~~------l~~~~~~----------------~~~~~~~~~l~~~gG~l~~~ 158 (275)
T 3bkx_A 111 LSDDLGP----------IADQHFDRVVLAHS------LWYFASA----------------NALALLFKNMAAVCDHVDVA 158 (275)
T ss_dssp TTTCCGG----------GTTCCCSEEEEESC------GGGSSCH----------------HHHHHHHHHHTTTCSEEEEE
T ss_pred hhhccCC----------CCCCCEEEEEEccc------hhhCCCH----------------HHHHHHHHHHhCCCCEEEEE
Confidence 22221 01257999997533 2221211 13555566667779999988
Q ss_pred cCCCC
Q psy17365 322 TCSLN 326 (646)
Q Consensus 322 TCSl~ 326 (646)
+.+..
T Consensus 159 ~~~~~ 163 (275)
T 3bkx_A 159 EWSMQ 163 (275)
T ss_dssp EECSS
T ss_pred EecCC
Confidence 76553
No 170
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.81 E-value=2.7e-08 Score=96.85 Aligned_cols=122 Identities=14% Similarity=0.052 Sum_probs=90.8
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccccc
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYT 253 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~ 253 (646)
.+.++.+|||+|||+|..+..+++. ...|+++|+++..+..+++++ ++.+..+|+..++.
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~----------~~~v~~vD~s~~~~~~a~~~~------~~~~~~~d~~~~~~---- 99 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAA----------GFDVDATDGSPELAAEASRRL------GRPVRTMLFHQLDA---- 99 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHT----------TCEEEEEESCHHHHHHHHHHH------TSCCEECCGGGCCC----
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHc----------CCeEEEECCCHHHHHHHHHhc------CCceEEeeeccCCC----
Confidence 3567899999999999999988864 358999999999999888876 45567788776541
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCcc-----
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPL----- 328 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~----- 328 (646)
...||.|++... +..-+ ......+|.++.++|||||+++.+++.....
T Consensus 100 -------~~~fD~v~~~~~------l~~~~--------------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~ 152 (211)
T 3e23_A 100 -------IDAYDAVWAHAC------LLHVP--------------RDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKL 152 (211)
T ss_dssp -------CSCEEEEEECSC------GGGSC--------------HHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTT
T ss_pred -------CCcEEEEEecCc------hhhcC--------------HHHHHHHHHHHHHhcCCCcEEEEEEcCCCccccccc
Confidence 257999998532 21111 1123578999999999999999987654432
Q ss_pred ------ccHHHHHHHHHHcc
Q psy17365 329 ------EDEAVIQRLIVETQ 342 (646)
Q Consensus 329 ------ENE~VV~~~L~~~~ 342 (646)
-+.+.+..+|++.+
T Consensus 153 ~~~~~~~~~~~~~~~l~~aG 172 (211)
T 3e23_A 153 ARYYNYPSEEWLRARYAEAG 172 (211)
T ss_dssp SCEECCCCHHHHHHHHHHHC
T ss_pred chhccCCCHHHHHHHHHhCC
Confidence 26677888888876
No 171
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.81 E-value=2.6e-09 Score=106.77 Aligned_cols=114 Identities=11% Similarity=0.095 Sum_probs=80.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHH-HHHH---HHHHHHHcCCCCeEEEecCCCCCccc
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNN-RCYM---LVHQAKRLNSPCAIITNHDASVMPNV 250 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~-Rl~~---L~~n~~rlg~~ni~v~~~Da~~~p~~ 250 (646)
.+++++|||+|||+|..+..+|... +.+.|+|+|+|+. .++. +++++++.+.+|+.+..+|+..+|..
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~--------~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~ 93 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAIND--------QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFE 93 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTC--------TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGG
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhC--------CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhh
Confidence 4688999999999999999988642 4678999999944 4444 47777888999999999999887532
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
. ...+|.|.+..| |... ..........+|.++.++|||||+++.++
T Consensus 94 ~---------~d~v~~i~~~~~----------------~~~~-~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 94 L---------KNIADSISILFP----------------WGTL-LEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp G---------TTCEEEEEEESC----------------CHHH-HHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred c---------cCeEEEEEEeCC----------------CcHH-hhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 1 134666666544 1100 00000112357899999999999999843
No 172
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.80 E-value=2e-08 Score=97.13 Aligned_cols=111 Identities=12% Similarity=-0.006 Sum_probs=83.5
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
..++.+|||+|||+|..++.++.. ....|+++|+++..++.+++++...+ .++.+...|+..++.
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~----- 85 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVE---------DGYKTYGIEISDLQLKKAENFSRENN-FKLNISKGDIRKLPF----- 85 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHH---------TTCEEEEEECCHHHHHHHHHHHHHHT-CCCCEEECCTTSCCS-----
T ss_pred cCCCCEEEEECCCCCHHHHHHHHh---------CCCEEEEEECCHHHHHHHHHHHHhcC-CceEEEECchhhCCC-----
Confidence 456889999999999986655543 24589999999999999999988776 468888999877541
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
....||.|++... +.. +. ......+|.++.++|||||+++.++.+.
T Consensus 86 -----~~~~fD~v~~~~~------l~~-------~~-------~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 86 -----KDESMSFVYSYGT------IFH-------MR-------KNDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp -----CTTCEEEEEECSC------GGG-------SC-------HHHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred -----CCCceeEEEEcCh------HHh-------CC-------HHHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 1257999997422 111 11 1224578999999999999999988765
No 173
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.80 E-value=1.1e-08 Score=111.08 Aligned_cols=111 Identities=11% Similarity=0.053 Sum_probs=84.3
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHH-------HHcCC--CCeEEEec
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQA-------KRLNS--PCAIITNH 242 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~-------~rlg~--~ni~v~~~ 242 (646)
.+++++|++|||+|||.|..+.++|... +.+.|+|+|+++..+.+++.++ +.+|. .+|.++++
T Consensus 168 ~l~l~~gd~VLDLGCGtG~l~l~lA~~~--------g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~G 239 (438)
T 3uwp_A 168 EIKMTDDDLFVDLGSGVGQVVLQVAAAT--------NCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERG 239 (438)
T ss_dssp HHCCCTTCEEEEESCTTSHHHHHHHHHC--------CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEEC
T ss_pred hcCCCCCCEEEEeCCCCCHHHHHHHHHC--------CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEEC
Confidence 4578999999999999999999998763 3567999999999988888765 34565 68999999
Q ss_pred CCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 243 DASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 243 Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
|+..++... ....||+|+++.+|-. |+. ...|.+.++.|||||+||.+
T Consensus 240 D~~~lp~~d--------~~~~aDVVf~Nn~~F~-------pdl----------------~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 240 DFLSEEWRE--------RIANTSVIFVNNFAFG-------PEV----------------DHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp CTTSHHHHH--------HHHTCSEEEECCTTCC-------HHH----------------HHHHHHHHTTSCTTCEEEES
T ss_pred cccCCcccc--------ccCCccEEEEcccccC-------chH----------------HHHHHHHHHcCCCCcEEEEe
Confidence 998764210 0136999999876421 221 24466778999999999954
No 174
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.80 E-value=1.3e-08 Score=104.12 Aligned_cols=107 Identities=18% Similarity=0.089 Sum_probs=84.6
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~ 252 (646)
++..++.+|||+|||+|..+..++.. ...|+|+|+++..++.+++++...+. ++.+..+|+..++.
T Consensus 116 ~~~~~~~~vLD~GcG~G~~~~~l~~~----------g~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~--- 181 (286)
T 3m70_A 116 AKIISPCKVLDLGCGQGRNSLYLSLL----------GYDVTSWDHNENSIAFLNETKEKENL-NISTALYDINAANI--- 181 (286)
T ss_dssp HHHSCSCEEEEESCTTCHHHHHHHHT----------TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCCC---
T ss_pred hhccCCCcEEEECCCCCHHHHHHHHC----------CCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEEeccccccc---
Confidence 34458899999999999999988865 24899999999999999999999988 89999999877542
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
...||.|++..+..- -++ .....+|.++.++|||||+++..
T Consensus 182 --------~~~fD~i~~~~~~~~------~~~--------------~~~~~~l~~~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 182 --------QENYDFIVSTVVFMF------LNR--------------ERVPSIIKNMKEHTNVGGYNLIV 222 (286)
T ss_dssp --------CSCEEEEEECSSGGG------SCG--------------GGHHHHHHHHHHTEEEEEEEEEE
T ss_pred --------cCCccEEEEccchhh------CCH--------------HHHHHHHHHHHHhcCCCcEEEEE
Confidence 257999998764211 110 11246899999999999997764
No 175
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.79 E-value=3.3e-09 Score=111.07 Aligned_cols=91 Identities=19% Similarity=0.222 Sum_probs=74.9
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccc
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~ 251 (646)
.|++++|.+|||+|||+|+.|..+++.+ +.+.|+|+|+|+..++.+++|++.+| .++.++++|+..++...
T Consensus 21 ~L~~~~g~~vLD~g~G~G~~s~~la~~~--------~~~~VigvD~d~~al~~A~~~~~~~g-~~v~~v~~d~~~l~~~l 91 (301)
T 1m6y_A 21 FLKPEDEKIILDCTVGEGGHSRAILEHC--------PGCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYREADFLL 91 (301)
T ss_dssp HHCCCTTCEEEETTCTTSHHHHHHHHHC--------TTCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGGHHHHH
T ss_pred hcCCCCCCEEEEEeCCcCHHHHHHHHHC--------CCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCHHHHHHHH
Confidence 4567899999999999999999999875 36799999999999999999999888 78999999988765321
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCC
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGD 276 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~ 276 (646)
. ..+ ...||.|++|+|||..
T Consensus 92 ~--~~g---~~~~D~Vl~D~gvSs~ 111 (301)
T 1m6y_A 92 K--TLG---IEKVDGILMDLGVSTY 111 (301)
T ss_dssp H--HTT---CSCEEEEEEECSCCHH
T ss_pred H--hcC---CCCCCEEEEcCccchh
Confidence 1 001 1469999999999853
No 176
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.79 E-value=1.1e-08 Score=108.36 Aligned_cols=122 Identities=12% Similarity=0.082 Sum_probs=89.7
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEecCCCCCcccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS-PCAIITNHDASVMPNVL 251 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~-~ni~v~~~Da~~~p~~~ 251 (646)
+.+.++.+|||+|||+|..+..+++. +.+.|+|+|+++ .++.++++++..|. .++.++.+|+..++.
T Consensus 60 ~~~~~~~~VLDiGcGtG~ls~~la~~---------g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-- 127 (340)
T 2fyt_A 60 PHIFKDKVVLDVGCGTGILSMFAAKA---------GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHL-- 127 (340)
T ss_dssp GGGTTTCEEEEETCTTSHHHHHHHHT---------TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC--
T ss_pred hhhcCCCEEEEeeccCcHHHHHHHHc---------CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcC--
Confidence 34568899999999999999888764 356899999996 89999999999988 689999999987531
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC--Cccc
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL--NPLE 329 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl--~p~E 329 (646)
...+||.|+++..... +. +. .....+|..+.++|||||+++.++|++ .+.+
T Consensus 128 --------~~~~~D~Ivs~~~~~~---l~-~~---------------~~~~~~l~~~~~~LkpgG~lip~~~~~~~~~~~ 180 (340)
T 2fyt_A 128 --------PVEKVDVIISEWMGYF---LL-FE---------------SMLDSVLYAKNKYLAKGGSVYPDICTISLVAVS 180 (340)
T ss_dssp --------SCSCEEEEEECCCBTT---BT-TT---------------CHHHHHHHHHHHHEEEEEEEESCEEEEEEEEEC
T ss_pred --------CCCcEEEEEEcCchhh---cc-CH---------------HHHHHHHHHHHhhcCCCcEEEcccceEEEEEec
Confidence 1257999998752111 00 00 112357888899999999999665553 4455
Q ss_pred cHHH
Q psy17365 330 DEAV 333 (646)
Q Consensus 330 NE~V 333 (646)
+...
T Consensus 181 ~~~~ 184 (340)
T 2fyt_A 181 DVNK 184 (340)
T ss_dssp CHHH
T ss_pred chhH
Confidence 5443
No 177
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.79 E-value=1.8e-08 Score=97.89 Aligned_cols=107 Identities=14% Similarity=0.076 Sum_probs=83.0
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccccc
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYT 253 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~ 253 (646)
.+.++.+|||+|||+|..+..++.. ...|+++|+++..++.+++ .+..++.++++|+..+.
T Consensus 43 ~~~~~~~vLdiG~G~G~~~~~l~~~----------~~~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~~~~----- 103 (218)
T 3ou2_A 43 AGNIRGDVLELASGTGYWTRHLSGL----------ADRVTALDGSAEMIAEAGR----HGLDNVEFRQQDLFDWT----- 103 (218)
T ss_dssp TTTSCSEEEEESCTTSHHHHHHHHH----------SSEEEEEESCHHHHHHHGG----GCCTTEEEEECCTTSCC-----
T ss_pred cCCCCCeEEEECCCCCHHHHHHHhc----------CCeEEEEeCCHHHHHHHHh----cCCCCeEEEecccccCC-----
Confidence 4677889999999999999998876 3489999999999887766 67788999999987651
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
....||.|++.. ++..-++ .....+|..+.++|||||++++++.+.
T Consensus 104 ------~~~~~D~v~~~~------~l~~~~~--------------~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 104 ------PDRQWDAVFFAH------WLAHVPD--------------DRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp ------CSSCEEEEEEES------CGGGSCH--------------HHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred ------CCCceeEEEEec------hhhcCCH--------------HHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 125799999742 2222121 123578999999999999999987765
No 178
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.78 E-value=3.8e-08 Score=100.32 Aligned_cols=107 Identities=17% Similarity=0.141 Sum_probs=81.9
Q ss_pred cccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccc
Q psy17365 171 LLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNV 250 (646)
Q Consensus 171 ~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~ 250 (646)
..+.+.++.+|||+|||+|..+..+++. .+.|+++|+++..++.++++. +++.+..+|+..++.
T Consensus 51 ~~l~~~~~~~vLDiGcG~G~~~~~l~~~----------~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~- 114 (279)
T 3ccf_A 51 QLLNPQPGEFILDLGCGTGQLTEKIAQS----------GAEVLGTDNAATMIEKARQNY-----PHLHFDVADARNFRV- 114 (279)
T ss_dssp HHHCCCTTCEEEEETCTTSHHHHHHHHT----------TCEEEEEESCHHHHHHHHHHC-----TTSCEEECCTTTCCC-
T ss_pred HHhCCCCCCEEEEecCCCCHHHHHHHhC----------CCeEEEEECCHHHHHHHHhhC-----CCCEEEECChhhCCc-
Confidence 4456788999999999999999988862 468999999999998887653 678888999877642
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
...||.|++... +..-++ ...+|.++.++|||||+|+.++...
T Consensus 115 ----------~~~fD~v~~~~~------l~~~~d----------------~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 115 ----------DKPLDAVFSNAM------LHWVKE----------------PEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp ----------SSCEEEEEEESC------GGGCSC----------------HHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred ----------CCCcCEEEEcch------hhhCcC----------------HHHHHHHHHHhcCCCcEEEEEecCC
Confidence 247999997432 111111 1367999999999999999876543
No 179
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.78 E-value=1.5e-08 Score=104.53 Aligned_cols=111 Identities=16% Similarity=0.173 Sum_probs=84.5
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC---CCeEEEecCCCCCcccc
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS---PCAIITNHDASVMPNVL 251 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~---~ni~v~~~Da~~~p~~~ 251 (646)
+.++ +|||+|||+|..+..+++. ...|+++|+++..++.+++++...+. .++.++++|+..++.
T Consensus 81 ~~~~-~vLDlGcG~G~~~~~l~~~----------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-- 147 (299)
T 3g2m_A 81 PVSG-PVLELAAGMGRLTFPFLDL----------GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-- 147 (299)
T ss_dssp CCCS-CEEEETCTTTTTHHHHHTT----------TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC--
T ss_pred CCCC-cEEEEeccCCHHHHHHHHc----------CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc--
Confidence 3444 9999999999999988764 24799999999999999999988775 679999999987652
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCC
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLN 326 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~ 326 (646)
...||.|+|.. +++. .+.+ ..+..+|.++.++|||||+|+.++....
T Consensus 148 ---------~~~fD~v~~~~-----~~~~-------~~~~-------~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 148 ---------DKRFGTVVISS-----GSIN-------ELDE-------ADRRGLYASVREHLEPGGKFLLSLAMSE 194 (299)
T ss_dssp ---------SCCEEEEEECH-----HHHT-------TSCH-------HHHHHHHHHHHHHEEEEEEEEEEEECCH
T ss_pred ---------CCCcCEEEECC-----cccc-------cCCH-------HHHHHHHHHHHHHcCCCcEEEEEeecCc
Confidence 25799998621 1110 0011 2245789999999999999999887654
No 180
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.77 E-value=2.1e-08 Score=103.24 Aligned_cols=113 Identities=12% Similarity=0.068 Sum_probs=83.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHc----CCCCeEEEecCCCCCccccc
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRL----NSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rl----g~~ni~v~~~Da~~~p~~~~ 252 (646)
.+.+|||+|||.|+.+..++... +...|+++|+|+..++.+++++..+ ..+++.++.+|+..+...
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~--------~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~-- 144 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHP--------SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAK-- 144 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCT--------TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHT--
T ss_pred CCCEEEEECCchHHHHHHHHhCC--------CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh--
Confidence 45799999999999988877532 3579999999999999999987653 346799999998764211
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
....||.|++|+|.. .+. +..+ ...+++..+.+.|+|||.+|..+.+
T Consensus 145 -------~~~~fD~Ii~d~~~~-~~~----~~~l-------------~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 145 -------SENQYDVIMVDSTEP-VGP----AVNL-------------FTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp -------CCSCEEEEEESCSSC-CSC----CCCC-------------STTHHHHHHHHHEEEEEEEEEECCC
T ss_pred -------CCCCeeEEEECCCCC-CCc----chhh-------------hHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 125799999998842 221 1100 0136788899999999999988655
No 181
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.76 E-value=2e-08 Score=106.87 Aligned_cols=119 Identities=14% Similarity=0.058 Sum_probs=89.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC-eEEEecCCCCCcccccc
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC-AIITNHDASVMPNVLYT 253 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n-i~v~~~Da~~~p~~~~~ 253 (646)
+.++.+|||+|||+|..+..+++. +.+.|+|+|++ ..++.++++++..|..+ +.++++|+..++.
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~---------g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~---- 129 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA---------GARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVEL---- 129 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT---------TCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCC----
T ss_pred cCCCCEEEEEeccchHHHHHHHHC---------CCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccC----
Confidence 457889999999999999888875 36799999999 59999999999999876 8999999987641
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC--CccccH
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL--NPLEDE 331 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl--~p~ENE 331 (646)
....||.|+++.+..... ... ....+|..+.++|||||+|+.+.+++ .+.+..
T Consensus 130 ------~~~~fD~Iis~~~~~~l~----~~~---------------~~~~~l~~~~r~LkpgG~li~~~~~~~~~~~~~~ 184 (349)
T 3q7e_A 130 ------PVEKVDIIISEWMGYCLF----YES---------------MLNTVLHARDKWLAPDGLIFPDRATLYVTAIEDR 184 (349)
T ss_dssp ------SSSCEEEEEECCCBBTBT----BTC---------------CHHHHHHHHHHHEEEEEEEESCEEEEEEEEECCH
T ss_pred ------CCCceEEEEEcccccccc----Cch---------------hHHHHHHHHHHhCCCCCEEccccceEEEeeecCh
Confidence 125799999986422210 111 12367888889999999999777663 344444
Q ss_pred H
Q psy17365 332 A 332 (646)
Q Consensus 332 ~ 332 (646)
.
T Consensus 185 ~ 185 (349)
T 3q7e_A 185 Q 185 (349)
T ss_dssp H
T ss_pred h
Confidence 3
No 182
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.76 E-value=1.7e-08 Score=104.33 Aligned_cols=114 Identities=13% Similarity=0.098 Sum_probs=85.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcC----CCCeEEEecCCCCCcccc
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLN----SPCAIITNHDASVMPNVL 251 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg----~~ni~v~~~Da~~~p~~~ 251 (646)
.++.+|||+|||.|+.+..++... +...|+++|+|+..++.+++++..++ .+++.++.+|+..+....
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~--------~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~ 148 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYK--------SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV 148 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT--------TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcC--------CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhC
Confidence 356799999999999998887542 35799999999999999999876543 468999999987643211
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
...||.|++|++.. .|. . ..+ ...+++..+.++|+|||+|+..+++
T Consensus 149 ---------~~~fD~Ii~d~~~~-~~~-----~----------~~l--~~~~~l~~~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 149 ---------TNTYDVIIVDSSDP-IGP-----A----------ETL--FNQNFYEKIYNALKPNGYCVAQCES 194 (283)
T ss_dssp ---------CSCEEEEEEECCCT-TTG-----G----------GGG--SSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred ---------CCCceEEEEcCCCC-CCc-----c----------hhh--hHHHHHHHHHHhcCCCcEEEEECCC
Confidence 25799999998632 111 0 000 1247889999999999999988765
No 183
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.76 E-value=5.1e-08 Score=97.38 Aligned_cols=107 Identities=19% Similarity=0.126 Sum_probs=82.1
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
..++.+|||+|||+|..+..+++. ...|+++|+|+..++.+++++...+. ++.++++|+..++.
T Consensus 39 ~~~~~~vLDlGcG~G~~~~~l~~~----------~~~v~gvD~s~~~l~~a~~~~~~~~~-~v~~~~~d~~~~~~----- 102 (252)
T 1wzn_A 39 KREVRRVLDLACGTGIPTLELAER----------GYEVVGLDLHEEMLRVARRKAKERNL-KIEFLQGDVLEIAF----- 102 (252)
T ss_dssp SSCCCEEEEETCTTCHHHHHHHHT----------TCEEEEEESCHHHHHHHHHHHHHTTC-CCEEEESCGGGCCC-----
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHC----------CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEECChhhccc-----
Confidence 457789999999999999988764 34899999999999999999988776 68899999877541
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
...||.|+|... .... +. ......+|..+.++|||||.++.++
T Consensus 103 ------~~~fD~v~~~~~--~~~~----------~~-------~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 103 ------KNEFDAVTMFFS--TIMY----------FD-------EEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp ------CSCEEEEEECSS--GGGG----------SC-------HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------CCCccEEEEcCC--chhc----------CC-------HHHHHHHHHHHHHHcCCCeEEEEec
Confidence 146999996321 1110 01 1234578999999999999999764
No 184
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.75 E-value=3.4e-08 Score=102.10 Aligned_cols=120 Identities=19% Similarity=0.159 Sum_probs=81.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC---------------------
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS--------------------- 234 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~--------------------- 234 (646)
.++.+|||+|||+|..|..|+..+ +...|+|+|+|+..++.++++++..+.
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~--------~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKW--------GPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEG 116 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHT--------CCSEEEEEESCHHHHHHHHHTC--------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHc--------CCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccc
Confidence 368899999999999999999886 356999999999999999988776542
Q ss_pred -------------------------------------CCeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCc
Q psy17365 235 -------------------------------------PCAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDG 277 (646)
Q Consensus 235 -------------------------------------~ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G 277 (646)
.+|.+.++|+...+..... .....||.|+|...
T Consensus 117 ~~~~~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~-----~~~~~fD~I~~~~v----- 186 (292)
T 3g07_A 117 TTTVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVE-----AQTPEYDVVLCLSL----- 186 (292)
T ss_dssp -------------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHT-----TCCCCEEEEEEESC-----
T ss_pred cccccccccccchhhhccCccccccccccccccccccccceEEecccccCcccccc-----ccCCCcCEEEEChH-----
Confidence 3688888887643211000 11357999997321
Q ss_pred ccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 278 TMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 278 ~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
+ .|- .+..-.....+++.++.++|||||+||..+..
T Consensus 187 -l--------~~i--hl~~~~~~~~~~l~~~~~~LkpGG~lil~~~~ 222 (292)
T 3g07_A 187 -T--------KWV--HLNWGDEGLKRMFRRIYRHLRPGGILVLEPQP 222 (292)
T ss_dssp -H--------HHH--HHHHHHHHHHHHHHHHHHHEEEEEEEEEECCC
T ss_pred -H--------HHh--hhcCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 0 110 00001124467899999999999999987543
No 185
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.74 E-value=2.7e-08 Score=99.55 Aligned_cols=105 Identities=14% Similarity=0.132 Sum_probs=81.4
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccccc
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYT 253 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~ 253 (646)
.+.++.+|||+|||+|..+..+++. .+.|+++|+++..++.+++++ ..+.+++.+..+|+..++.
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~----------~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~---- 100 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR----------GYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIPL---- 100 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT----------TCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCCS----
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC----------CCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCCC----
Confidence 5678899999999999999988754 358999999999999998887 4456789999999977641
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
....||.|++... +..-++ ...+|.++.++|||||+|+.+
T Consensus 101 ------~~~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 101 ------PDESVHGVIVVHL------WHLVPD----------------WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp ------CTTCEEEEEEESC------GGGCTT----------------HHHHHHHHHHHEEEEEEEEEE
T ss_pred ------CCCCeeEEEECCc------hhhcCC----------------HHHHHHHHHHHCCCCcEEEEE
Confidence 1247999997421 111111 246899999999999999976
No 186
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.73 E-value=4.7e-08 Score=107.09 Aligned_cols=113 Identities=13% Similarity=0.087 Sum_probs=83.8
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHH-------HHHHHHcC--CCCeEEEec
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYML-------VHQAKRLN--SPCAIITNH 242 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L-------~~n~~rlg--~~ni~v~~~ 242 (646)
.+++++|++|||+|||+|..+..+|... +.+.|+|+|+++..++.+ +.+++.+| ..++.++++
T Consensus 237 ~l~l~~g~~VLDLGCGsG~la~~LA~~~--------g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~g 308 (433)
T 1u2z_A 237 QCQLKKGDTFMDLGSGVGNCVVQAALEC--------GCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLK 308 (433)
T ss_dssp HTTCCTTCEEEEESCTTSHHHHHHHHHH--------CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEES
T ss_pred hcCCCCCCEEEEeCCCcCHHHHHHHHHC--------CCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEc
Confidence 3578899999999999999999999875 356899999999998888 88888889 578999887
Q ss_pred CCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 243 DASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 243 Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
|+...+.... .....||+|+++..+. .++ ....|..+.+.|||||+||.+
T Consensus 309 D~~~~~~~~~------~~~~~FDvIvvn~~l~-------~~d----------------~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 309 KSFVDNNRVA------ELIPQCDVILVNNFLF-------DED----------------LNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp SCSTTCHHHH------HHGGGCSEEEECCTTC-------CHH----------------HHHHHHHHHTTCCTTCEEEES
T ss_pred Cccccccccc------cccCCCCEEEEeCccc-------ccc----------------HHHHHHHHHHhCCCCeEEEEe
Confidence 7542110000 0014699999864321 011 124578889999999999865
No 187
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.73 E-value=3.6e-08 Score=92.50 Aligned_cols=125 Identities=10% Similarity=0.079 Sum_probs=89.9
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~ 252 (646)
+++.++.+|||+|||+|..+..+++. .+.|+++|+++..++.++++ .+++.+...| ..++
T Consensus 13 ~~~~~~~~vLDiG~G~G~~~~~l~~~----------~~~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d-~~~~---- 72 (170)
T 3i9f_A 13 IFEGKKGVIVDYGCGNGFYCKYLLEF----------ATKLYCIDINVIALKEVKEK-----FDSVITLSDP-KEIP---- 72 (170)
T ss_dssp HHSSCCEEEEEETCTTCTTHHHHHTT----------EEEEEEECSCHHHHHHHHHH-----CTTSEEESSG-GGSC----
T ss_pred cCcCCCCeEEEECCCCCHHHHHHHhh----------cCeEEEEeCCHHHHHHHHHh-----CCCcEEEeCC-CCCC----
Confidence 45778999999999999999888764 23899999999999888776 5678888888 2221
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccc---
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLE--- 329 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~E--- 329 (646)
...||.|++... +..-++ ...+|.++.++|||||+++.++......+
T Consensus 73 --------~~~~D~v~~~~~------l~~~~~----------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~ 122 (170)
T 3i9f_A 73 --------DNSVDFILFANS------FHDMDD----------------KQHVISEVKRILKDDGRVIIIDWRKENTGIGP 122 (170)
T ss_dssp --------TTCEEEEEEESC------STTCSC----------------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSS
T ss_pred --------CCceEEEEEccc------hhcccC----------------HHHHHHHHHHhcCCCCEEEEEEcCccccccCc
Confidence 257999997532 111111 24789999999999999999876543221
Q ss_pred ------cHHHHHHHHHHccCcEEEeecc
Q psy17365 330 ------DEAVIQRLIVETQGAVQLVDVS 351 (646)
Q Consensus 330 ------NE~VV~~~L~~~~~~~elv~~~ 351 (646)
..+.+..+|+ + |+++...
T Consensus 123 ~~~~~~~~~~~~~~l~--G--f~~~~~~ 146 (170)
T 3i9f_A 123 PLSIRMDEKDYMGWFS--N--FVVEKRF 146 (170)
T ss_dssp CGGGCCCHHHHHHHTT--T--EEEEEEE
T ss_pred hHhhhcCHHHHHHHHh--C--cEEEEcc
Confidence 2455666666 2 7776654
No 188
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.73 E-value=1.6e-08 Score=100.14 Aligned_cols=112 Identities=13% Similarity=0.169 Sum_probs=82.0
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCC-CCcccccc
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDAS-VMPNVLYT 253 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~-~~p~~~~~ 253 (646)
+.++.+|||+|||+|..+..+++. ...|+++|+++..++.++++ .+++.++++|+. .+|. .
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~----------~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~-~-- 107 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ----------AARWAAYDFSPELLKLARAN-----APHADVYEWNGKGELPA-G-- 107 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG----------SSEEEEEESCHHHHHHHHHH-----CTTSEEEECCSCSSCCT-T--
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc----------CCEEEEEECCHHHHHHHHHh-----CCCceEEEcchhhccCC-c--
Confidence 357889999999999999888764 35899999999999888876 567899999984 3331 0
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHH
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAV 333 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~V 333 (646)
....||.|++.. ++. .+|.++.++|||||+|+.. ... .+...
T Consensus 108 ------~~~~fD~v~~~~----------~~~------------------~~l~~~~~~LkpgG~l~~~-~~~---~~~~~ 149 (226)
T 3m33_A 108 ------LGAPFGLIVSRR----------GPT------------------SVILRLPELAAPDAHFLYV-GPR---LNVPE 149 (226)
T ss_dssp ------CCCCEEEEEEES----------CCS------------------GGGGGHHHHEEEEEEEEEE-ESS---SCCTH
T ss_pred ------CCCCEEEEEeCC----------CHH------------------HHHHHHHHHcCCCcEEEEe-CCc---CCHHH
Confidence 025799999751 111 4577888999999999932 222 23445
Q ss_pred HHHHHHHcc
Q psy17365 334 IQRLIVETQ 342 (646)
Q Consensus 334 V~~~L~~~~ 342 (646)
+...|.+.+
T Consensus 150 ~~~~l~~~G 158 (226)
T 3m33_A 150 VPERLAAVG 158 (226)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHCC
Confidence 677787765
No 189
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.72 E-value=1.6e-08 Score=114.02 Aligned_cols=176 Identities=13% Similarity=0.109 Sum_probs=113.3
Q ss_pred ccccEEEecccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCC-CC------CCCcEEEEEcCCHHHHHHHHH
Q psy17365 155 ATGHISRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADS-NP------VPSGLVVANDVDNNRCYMLVH 227 (646)
Q Consensus 155 ~~G~i~~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~-~~------~~~G~VvA~Dis~~Rl~~L~~ 227 (646)
..|.++--...+.+.+.+++++++ +|||.|||+|+..+++++.+..... .. .....++|+|+++..+.+++.
T Consensus 223 ~~G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~ 301 (544)
T 3khk_A 223 QGGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAM 301 (544)
T ss_dssp CSTTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHH
T ss_pred cCCeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHH
Confidence 457776666666677777888887 9999999999999988776531100 00 003579999999999999999
Q ss_pred HHHHcCCC-CeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCccccc--CccccccCCcch-------hhhh
Q psy17365 228 QAKRLNSP-CAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRK--NPDIWTKWTPSN-------GNNL 297 (646)
Q Consensus 228 n~~rlg~~-ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk--~pd~~~~w~~~~-------~~~l 297 (646)
|+...|+. ++.+.++|....+.. ...+||+||++||.+....... ..+. +|.... ...-
T Consensus 302 Nl~l~gi~~~i~i~~gDtL~~~~~---------~~~~fD~Iv~NPPf~~~~~~~~~~~~d~--r~~~g~~~~~~~~~~~~ 370 (544)
T 3khk_A 302 NMVIRGIDFNFGKKNADSFLDDQH---------PDLRADFVMTNPPFNMKDWWHEKLADDP--RWTINTNGEKRILTPPT 370 (544)
T ss_dssp HHHHTTCCCBCCSSSCCTTTSCSC---------TTCCEEEEEECCCSSCCSCCCGGGTTCG--GGEECCC--CEECCCCT
T ss_pred HHHHhCCCcccceeccchhcCccc---------ccccccEEEECCCcCCccccchhhhhhh--hhhcCcccccccccCCC
Confidence 99888875 333467776543211 1257999999999986421110 0111 111000 1111
Q ss_pred HHHHHHHHHHHHHhhccCCeEEEEcCC--CCcc-ccHHHHHHHHHHcc
Q psy17365 298 HGIQYRIVKRGVEMLAVGGKIAYSTCS--LNPL-EDEAVIQRLIVETQ 342 (646)
Q Consensus 298 ~~lQ~~IL~~A~~lLKpGG~LVYSTCS--l~p~-ENE~VV~~~L~~~~ 342 (646)
...+...+.+++++||+||++++.+-. +... -.+.-+.+.|-+..
T Consensus 371 ~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~L~~~~~~~~~iRk~Lle~~ 418 (544)
T 3khk_A 371 GNANFAWMLHMLYHLAPTGSMALLLANGSMSSNTNNEGEIRKTLVEQD 418 (544)
T ss_dssp TCTHHHHHHHHHHTEEEEEEEEEEEETHHHHCCGGGHHHHHHHHHHTT
T ss_pred cchhHHHHHHHHHHhccCceEEEEecchhhhcCcchHHHHHHHHHhCC
Confidence 223446899999999999998877532 2222 34667777776654
No 190
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.72 E-value=2.1e-08 Score=107.83 Aligned_cols=120 Identities=13% Similarity=0.029 Sum_probs=90.6
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC-eEEEecCCCCCcccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC-AIITNHDASVMPNVL 251 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n-i~v~~~Da~~~p~~~ 251 (646)
+...++.+|||+|||+|..+..+++. +...|+|+|++ ..++.++++++..+..+ +.++++|+..++.
T Consensus 59 ~~~~~~~~VLDlGcGtG~ls~~la~~---------g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-- 126 (376)
T 3r0q_C 59 KHHFEGKTVLDVGTGSGILAIWSAQA---------GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISL-- 126 (376)
T ss_dssp TTTTTTCEEEEESCTTTHHHHHHHHT---------TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCC--
T ss_pred cccCCCCEEEEeccCcCHHHHHHHhc---------CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCc--
Confidence 34567899999999999999988875 35589999999 99999999999999865 8999999977641
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC--CCccc
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS--LNPLE 329 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS--l~p~E 329 (646)
..+||.|+++....... ... ....++..+.++|||||.|+.+.++ +.|.+
T Consensus 127 ---------~~~~D~Iv~~~~~~~l~----~e~---------------~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~ 178 (376)
T 3r0q_C 127 ---------PEKVDVIISEWMGYFLL----RES---------------MFDSVISARDRWLKPTGVMYPSHARMWLAPIK 178 (376)
T ss_dssp ---------SSCEEEEEECCCBTTBT----TTC---------------THHHHHHHHHHHEEEEEEEESSEEEEEEEEEC
T ss_pred ---------CCcceEEEEcChhhccc----chH---------------HHHHHHHHHHhhCCCCeEEEEecCeEEEEeec
Confidence 15799999976321110 001 1235788888999999999987776 44555
Q ss_pred cHH
Q psy17365 330 DEA 332 (646)
Q Consensus 330 NE~ 332 (646)
++.
T Consensus 179 ~~~ 181 (376)
T 3r0q_C 179 SNI 181 (376)
T ss_dssp CTH
T ss_pred chH
Confidence 543
No 191
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.71 E-value=2.4e-08 Score=104.47 Aligned_cols=114 Identities=14% Similarity=0.086 Sum_probs=82.9
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHc----CCCCeEEEecCCCCCcccc
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRL----NSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rl----g~~ni~v~~~Da~~~p~~~ 251 (646)
..+.+|||+|||.|+.+..++... +.+.|+++|+|+..++.+++++..+ ..+++.++.+|+..+...
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~--------~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~- 164 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHP--------SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQ- 164 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT--------TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHT-
T ss_pred CCCCEEEEECCCchHHHHHHHHcC--------CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhh-
Confidence 456799999999999998887542 3579999999999999999987662 346799999998764211
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
....||.|++|+|... + |. .+..+.+++..+.++|+|||+||..+.+
T Consensus 165 --------~~~~fD~Ii~d~~~~~-~-----~~------------~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 165 --------NQDAFDVIITDSSDPM-G-----PA------------ESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp --------CSSCEEEEEEECC-----------------------------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred --------CCCCceEEEECCCCCC-C-----cc------------hhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 1257999999987321 1 10 0112346889999999999999987644
No 192
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.71 E-value=5.1e-08 Score=96.25 Aligned_cols=107 Identities=16% Similarity=0.128 Sum_probs=81.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
++.+|||+|||+|..+..+++. ...|+++|+++..++.+++++...+. ++.+.+.|+..++.
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~----------~~~~~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~------- 98 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK----------FKNTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISNLNI------- 98 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG----------SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGGCCC-------
T ss_pred CCCeEEEeCCCCCHHHHHHHHC----------CCcEEEEECCHHHHHHHHHHHhhcCC-CeEEEecccccCCc-------
Confidence 6789999999999999888754 24799999999999999999988776 78899999876541
Q ss_pred CCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcC
Q psy17365 257 GNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTC 323 (646)
Q Consensus 257 g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTC 323 (646)
...||.|++.. +++..-++ ......+|.++.++|||||+++.++.
T Consensus 99 ----~~~fD~v~~~~-----~~l~~~~~-------------~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 99 ----NRKFDLITCCL-----DSTNYIID-------------SDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp ----SCCEEEEEECT-----TGGGGCCS-------------HHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ----cCCceEEEEcC-----ccccccCC-------------HHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 14799999742 01111110 01235789999999999999998653
No 193
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.71 E-value=3e-08 Score=98.04 Aligned_cols=107 Identities=15% Similarity=0.130 Sum_probs=80.0
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccc
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~ 251 (646)
++...++.+|||+|||+|..+..+++. +.+.|+++|+++..++.++++... .++.+...|+..++.
T Consensus 38 ~~~~~~~~~vLdiG~G~G~~~~~l~~~---------~~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~~~-- 103 (243)
T 3bkw_A 38 MLPEVGGLRIVDLGCGFGWFCRWAHEH---------GASYVLGLDLSEKMLARARAAGPD---TGITYERADLDKLHL-- 103 (243)
T ss_dssp HSCCCTTCEEEEETCTTCHHHHHHHHT---------TCSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGGGCCC--
T ss_pred hccccCCCEEEEEcCcCCHHHHHHHHC---------CCCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChhhccC--
Confidence 445568899999999999999988765 234899999999998888765432 468889999876541
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
....||.|++... +...++ ...+|.++.++|||||+++.++
T Consensus 104 --------~~~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 104 --------PQDSFDLAYSSLA------LHYVED----------------VARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp --------CTTCEEEEEEESC------GGGCSC----------------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------CCCCceEEEEecc------ccccch----------------HHHHHHHHHHhcCcCcEEEEEe
Confidence 1257999997432 211111 2378999999999999999876
No 194
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.70 E-value=3.5e-08 Score=97.33 Aligned_cols=102 Identities=14% Similarity=0.141 Sum_probs=76.9
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCC
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~ 255 (646)
.++.+|||+|||+|..+..+++. ...|+++|+++..++.+++++.. ++.+..+|+..++.
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~----------~~~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~~~~~------ 100 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEH----------FNDITCVEASEEAISHAQGRLKD----GITYIHSRFEDAQL------ 100 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTT----------CSCEEEEESCHHHHHHHHHHSCS----CEEEEESCGGGCCC------
T ss_pred cCCCcEEEECCCCCHHHHHHHHh----------CCcEEEEeCCHHHHHHHHHhhhC----CeEEEEccHHHcCc------
Confidence 46779999999999999888754 23799999999998888776432 78899999876521
Q ss_pred CCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHH-HhhccCCeEEEEcCC
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGV-EMLAVGGKIAYSTCS 324 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~-~lLKpGG~LVYSTCS 324 (646)
...||.|++. +++..-++. ..+|.++. ++|||||+|+.++..
T Consensus 101 -----~~~fD~v~~~------~~l~~~~~~----------------~~~l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 101 -----PRRYDNIVLT------HVLEHIDDP----------------VALLKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp -----SSCEEEEEEE------SCGGGCSSH----------------HHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred -----CCcccEEEEh------hHHHhhcCH----------------HHHHHHHHHHhcCCCCEEEEEcCC
Confidence 2579999973 223222221 36899999 999999999998744
No 195
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.70 E-value=2.5e-08 Score=105.14 Aligned_cols=123 Identities=15% Similarity=0.042 Sum_probs=90.2
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEecCCCCCcccccc
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CAIITNHDASVMPNVLYT 253 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni~v~~~Da~~~p~~~~~ 253 (646)
+.++.+|||+|||+|..+..+++. +.+.|+|+|++ ..+..++++++..|.. ++.++.+|+..++.
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~---------g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---- 101 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKH---------GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHL---- 101 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHT---------CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCC----
T ss_pred hcCCCEEEEecCccHHHHHHHHHC---------CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccC----
Confidence 457889999999999999888764 35689999999 5899999999998885 58999999877531
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC--CccccH
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL--NPLEDE 331 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl--~p~ENE 331 (646)
...+||.|+++.+..... +.. ....+|..+.++|||||+|+.+++++ .+.++.
T Consensus 102 ------~~~~~D~Ivs~~~~~~l~----~~~---------------~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~ 156 (328)
T 1g6q_1 102 ------PFPKVDIIISEWMGYFLL----YES---------------MMDTVLYARDHYLVEGGLIFPDKCSIHLAGLEDS 156 (328)
T ss_dssp ------SSSCEEEEEECCCBTTBS----TTC---------------CHHHHHHHHHHHEEEEEEEESCEEEEEEEEECCH
T ss_pred ------CCCcccEEEEeCchhhcc----cHH---------------HHHHHHHHHHhhcCCCeEEEEeeceEEEEEecCc
Confidence 125799999987633211 000 01257788889999999999776664 455655
Q ss_pred HHHHH
Q psy17365 332 AVIQR 336 (646)
Q Consensus 332 ~VV~~ 336 (646)
.....
T Consensus 157 ~~~~~ 161 (328)
T 1g6q_1 157 QYKDE 161 (328)
T ss_dssp HHHHH
T ss_pred hhhhh
Confidence 44333
No 196
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.70 E-value=5.5e-08 Score=96.16 Aligned_cols=108 Identities=15% Similarity=0.155 Sum_probs=80.9
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCC
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~ 255 (646)
.++.+|||+|||+|..+..++.. ..|+++|+++..++.+++++...+ .++.+...|+..++.
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~-----------~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~------ 93 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH-----------YEVTGVDLSEEMLEIAQEKAMETN-RHVDFWVQDMRELEL------ 93 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT-----------SEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCGGGCCC------
T ss_pred CCCCeEEEecCCCCHHHHHHhhC-----------CeEEEEECCHHHHHHHHHhhhhcC-CceEEEEcChhhcCC------
Confidence 46789999999999988876532 589999999999999999988877 568889999876541
Q ss_pred CCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
...||.|++... ++...+ + ......+|.++.++|||||+++.++.+
T Consensus 94 -----~~~fD~v~~~~~-----~~~~~~------~-------~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 94 -----PEPVDAITILCD-----SLNYLQ------T-------EADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp -----SSCEEEEEECTT-----GGGGCC------S-------HHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -----CCCcCEEEEeCC-----chhhcC------C-------HHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 147999997531 111100 0 122357899999999999999987644
No 197
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.69 E-value=1.1e-07 Score=94.56 Aligned_cols=130 Identities=9% Similarity=0.021 Sum_probs=89.5
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccccc
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYT 253 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~ 253 (646)
.++++.+|||+|||+|..+..+++. ...|+++|+|+..++.++++ +.++..|+..+...
T Consensus 38 ~~~~~~~vLDiGcG~G~~~~~l~~~----------~~~v~gvD~s~~~~~~a~~~--------~~~~~~d~~~~~~~--- 96 (240)
T 3dli_A 38 YFKGCRRVLDIGCGRGEFLELCKEE----------GIESIGVDINEDMIKFCEGK--------FNVVKSDAIEYLKS--- 96 (240)
T ss_dssp GTTTCSCEEEETCTTTHHHHHHHHH----------TCCEEEECSCHHHHHHHHTT--------SEEECSCHHHHHHT---
T ss_pred hhcCCCeEEEEeCCCCHHHHHHHhC----------CCcEEEEECCHHHHHHHHhh--------cceeeccHHHHhhh---
Confidence 3567899999999999999888775 23699999999988877654 67778887654210
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCc------
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNP------ 327 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p------ 327 (646)
.....||.|++. +++..-++- ....+|..+.++|||||+|+.++.....
T Consensus 97 -----~~~~~fD~i~~~------~~l~~~~~~--------------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~ 151 (240)
T 3dli_A 97 -----LPDKYLDGVMIS------HFVEHLDPE--------------RLFELLSLCYSKMKYSSYIVIESPNPTSLYSLIN 151 (240)
T ss_dssp -----SCTTCBSEEEEE------SCGGGSCGG--------------GHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHH
T ss_pred -----cCCCCeeEEEEC------CchhhCCcH--------------HHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHH
Confidence 112579999973 222222210 1246899999999999999998765321
Q ss_pred ---------cccHHHHHHHHHHccCcEEEeecc
Q psy17365 328 ---------LEDEAVIQRLIVETQGAVQLVDVS 351 (646)
Q Consensus 328 ---------~ENE~VV~~~L~~~~~~~elv~~~ 351 (646)
.-....+..+|++.+ |+++.+.
T Consensus 152 ~~~~~~~~~~~~~~~l~~~l~~aG--f~~~~~~ 182 (240)
T 3dli_A 152 FYIDPTHKKPVHPETLKFILEYLG--FRDVKIE 182 (240)
T ss_dssp HTTSTTCCSCCCHHHHHHHHHHHT--CEEEEEE
T ss_pred HhcCccccccCCHHHHHHHHHHCC--CeEEEEE
Confidence 113456677788776 5665544
No 198
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.69 E-value=1.5e-08 Score=106.78 Aligned_cols=114 Identities=14% Similarity=0.124 Sum_probs=84.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHc----CCCCeEEEecCCCCCcccc
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRL----NSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rl----g~~ni~v~~~Da~~~p~~~ 251 (646)
.++.+|||+|||+|+.+..++... +...|+++|+|+..++.+++++..+ +.+++.++.+|+..+....
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~--------~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~ 186 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYK--------SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV 186 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCT--------TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC
T ss_pred CCCCEEEEEcCCccHHHHHHHHcC--------CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhc
Confidence 355799999999999998887542 3579999999999999999987763 2467999999987642110
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
...||.|++|++.. .| | . ..+ .+.+++..+.++|+|||+++..+.+
T Consensus 187 ---------~~~fDvIi~d~~~p-~~-----~--------~--~~l--~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 187 ---------TNTYDVIIVDSSDP-IG-----P--------A--ETL--FNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp ---------CSCEEEEEEECCCS-SS-----G--------G--GGG--SSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ---------CCCceEEEECCcCC-CC-----c--------c--hhh--hHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 24799999998521 11 1 0 000 1257899999999999999987544
No 199
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.69 E-value=6.5e-08 Score=94.12 Aligned_cols=130 Identities=14% Similarity=0.109 Sum_probs=90.2
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
..++.+|||+|||+|..+..+++. ...|+++|+++..++.++++ .++.+...|+..+.....
T Consensus 50 ~~~~~~vLdiG~G~G~~~~~l~~~----------~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~-- 111 (227)
T 3e8s_A 50 GRQPERVLDLGCGEGWLLRALADR----------GIEAVGVDGDRTLVDAARAA------GAGEVHLASYAQLAEAKV-- 111 (227)
T ss_dssp HTCCSEEEEETCTTCHHHHHHHTT----------TCEEEEEESCHHHHHHHHHT------CSSCEEECCHHHHHTTCS--
T ss_pred cCCCCEEEEeCCCCCHHHHHHHHC----------CCEEEEEcCCHHHHHHHHHh------cccccchhhHHhhccccc--
Confidence 346689999999999999888754 34899999999998887765 456677777665421100
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCcc------
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPL------ 328 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~------ 328 (646)
.....||.|++.... . .++. ..+|..+.++|||||+|+.++......
T Consensus 112 ----~~~~~fD~v~~~~~l------~-~~~~----------------~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~ 164 (227)
T 3e8s_A 112 ----PVGKDYDLICANFAL------L-HQDI----------------IELLSAMRTLLVPGGALVIQTLHPWSVADGDYQ 164 (227)
T ss_dssp ----CCCCCEEEEEEESCC------C-SSCC----------------HHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCS
T ss_pred ----ccCCCccEEEECchh------h-hhhH----------------HHHHHHHHHHhCCCeEEEEEecCccccCccccc
Confidence 112459999985331 1 1221 268999999999999999887532111
Q ss_pred ----------------------ccHHHHHHHHHHccCcEEEeecc
Q psy17365 329 ----------------------EDEAVIQRLIVETQGAVQLVDVS 351 (646)
Q Consensus 329 ----------------------ENE~VV~~~L~~~~~~~elv~~~ 351 (646)
-..+.+..+|++.+ |+++++.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG--f~~~~~~ 207 (227)
T 3e8s_A 165 DGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAG--LRLVSLQ 207 (227)
T ss_dssp CEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTT--EEEEEEE
T ss_pred cccchhhhhccccCcccceEEEecHHHHHHHHHHcC--CeEEEEe
Confidence 14567788888876 7777765
No 200
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.68 E-value=2.8e-08 Score=100.95 Aligned_cols=143 Identities=10% Similarity=0.026 Sum_probs=90.3
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcC--C-----------------
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLN--S----------------- 234 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg--~----------------- 234 (646)
.+.+|.+|||+|||+|..+..++.. +...|+|+|+|+..++.++++++... .
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~---------~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~ 122 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD---------SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSG 122 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG---------TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGG
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh---------hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCc
Confidence 3467889999999999876654432 24579999999999999988765431 0
Q ss_pred ----------CCeE-EEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHH
Q psy17365 235 ----------PCAI-ITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYR 303 (646)
Q Consensus 235 ----------~ni~-v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~ 303 (646)
.++. +..+|+....... ......||.|++- .++ ..+..-..-...
T Consensus 123 ~~~~~~~~~~~~i~~~~~~D~~~~~~~~------~~~~~~fD~V~~~------~~l------------~~i~~~~~~~~~ 178 (263)
T 2a14_A 123 RWEEKEEKLRAAVKRVLKCDVHLGNPLA------PAVLPLADCVLTL------LAM------------ECACCSLDAYRA 178 (263)
T ss_dssp GHHHHHHHHHHHEEEEEECCTTSSSTTT------TCCCCCEEEEEEE------SCH------------HHHCSSHHHHHH
T ss_pred chhhHHHHHHhhhheEEeccccCCCCCC------ccccCCCCEeeeh------HHH------------HHhcCCHHHHHH
Confidence 1233 7778876631110 0012479999972 111 000000122346
Q ss_pred HHHHHHHhhccCCeEEEEcCCCCc------------cccHHHHHHHHHHccCcEEEeecc
Q psy17365 304 IVKRGVEMLAVGGKIAYSTCSLNP------------LEDEAVIQRLIVETQGAVQLVDVS 351 (646)
Q Consensus 304 IL~~A~~lLKpGG~LVYSTCSl~p------------~ENE~VV~~~L~~~~~~~elv~~~ 351 (646)
+|.++.++|||||+|+.++..-.. .=.++.+..+|.+.+ |+++.+.
T Consensus 179 ~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aG--F~i~~~~ 236 (263)
T 2a14_A 179 ALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAG--FDIEQLL 236 (263)
T ss_dssp HHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTT--EEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCC--CEEEEEe
Confidence 899999999999999999642110 014566777888775 7776654
No 201
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.68 E-value=8.6e-08 Score=97.51 Aligned_cols=135 Identities=13% Similarity=0.044 Sum_probs=90.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHH-----------------cCCCCe
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKR-----------------LNSPCA 237 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~r-----------------lg~~ni 237 (646)
+.++.+|||+|||+|.-+..||+. ...|+|+|+|+..++.++++... -...++
T Consensus 66 ~~~~~~vLD~GCG~G~~~~~La~~----------G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 135 (252)
T 2gb4_A 66 GQSGLRVFFPLCGKAIEMKWFADR----------GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSI 135 (252)
T ss_dssp TCCSCEEEETTCTTCTHHHHHHHT----------TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSE
T ss_pred CCCCCeEEEeCCCCcHHHHHHHHC----------CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCce
Confidence 467889999999999999988864 23899999999999888655421 023578
Q ss_pred EEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCe
Q psy17365 238 IITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGK 317 (646)
Q Consensus 238 ~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~ 317 (646)
.+.++|+..++... ...||.|++-. ++-.-|. .....++.++.++|||||+
T Consensus 136 ~~~~~D~~~l~~~~---------~~~FD~V~~~~------~l~~l~~--------------~~~~~~l~~~~~~LkpGG~ 186 (252)
T 2gb4_A 136 SLYCCSIFDLPRAN---------IGKFDRIWDRG------ALVAINP--------------GDHDRYADIILSLLRKEFQ 186 (252)
T ss_dssp EEEESCTTTGGGGC---------CCCEEEEEESS------STTTSCG--------------GGHHHHHHHHHHTEEEEEE
T ss_pred EEEECccccCCccc---------CCCEEEEEEhh------hhhhCCH--------------HHHHHHHHHHHHHcCCCeE
Confidence 99999998765310 14799999532 1111111 1124678999999999999
Q ss_pred EEEEcCCCCcc--------ccHHHHHHHHHHccCcEEEeecc
Q psy17365 318 IAYSTCSLNPL--------EDEAVIQRLIVETQGAVQLVDVS 351 (646)
Q Consensus 318 LVYSTCSl~p~--------ENE~VV~~~L~~~~~~~elv~~~ 351 (646)
++..|....+. -.++-+.+++.. .|+++...
T Consensus 187 l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~---~f~v~~~~ 225 (252)
T 2gb4_A 187 YLVAVLSYDPTKHAGPPFYVPSAELKRLFGT---KCSMQCLE 225 (252)
T ss_dssp EEEEEEECCTTSCCCSSCCCCHHHHHHHHTT---TEEEEEEE
T ss_pred EEEEEEecCCccCCCCCCCCCHHHHHHHhhC---CeEEEEEe
Confidence 97665443211 134555666654 26666554
No 202
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.66 E-value=4.2e-08 Score=100.76 Aligned_cols=104 Identities=12% Similarity=0.063 Sum_probs=70.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC------CeEEE--ecCCCC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP------CAIIT--NHDASV 246 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~------ni~v~--~~Da~~ 246 (646)
+++|.+|||+|||||+.|..+++. +.|+|+|+++. +..+ ...... ++.++ .+|+..
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~-----------~~V~gvD~s~m-~~~a----~~~~~~~~~~~~~v~~~~~~~D~~~ 135 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR-----------PHVMDVRAYTL-GVGG----HEVPRITESYGWNIVKFKSRVDIHT 135 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS-----------TTEEEEEEECC-CCSS----CCCCCCCCBTTGGGEEEECSCCTTT
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc-----------CcEEEEECchh-hhhh----hhhhhhhhccCCCeEEEecccCHhH
Confidence 468999999999999999887642 57999999983 1111 111222 67888 889887
Q ss_pred CccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCC--eEEEEc
Q psy17365 247 MPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGG--KIAYST 322 (646)
Q Consensus 247 ~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG--~LVYST 322 (646)
++ ...||.|+||.. ...|. +.. . +..+..+|..+.++||||| .+|..+
T Consensus 136 l~------------~~~fD~V~sd~~-~~~~~----~~~---------d--~~~~l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 136 LP------------VERTDVIMCDVG-ESSPK----WSV---------E--SERTIKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp SC------------CCCCSEEEECCC-CCCSC----HHH---------H--HHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CC------------CCCCcEEEEeCc-ccCCc----cch---------h--HHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 64 147999999975 22221 110 0 1112237888999999999 888654
No 203
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.65 E-value=1.2e-07 Score=97.11 Aligned_cols=108 Identities=19% Similarity=0.227 Sum_probs=74.0
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCC-Cccc
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASV-MPNV 250 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~-~p~~ 250 (646)
.+.+.+|.+|||+|||+|..|..+++. .+.|+|+|+|+..++.+++++... .+.....+... .+.
T Consensus 40 ~l~l~~g~~VLDlGcGtG~~a~~La~~----------g~~V~gvD~S~~ml~~Ar~~~~~~---~v~~~~~~~~~~~~~- 105 (261)
T 3iv6_A 40 LENIVPGSTVAVIGASTRFLIEKALER----------GASVTVFDFSQRMCDDLAEALADR---CVTIDLLDITAEIPK- 105 (261)
T ss_dssp TTTCCTTCEEEEECTTCHHHHHHHHHT----------TCEEEEEESCHHHHHHHHHHTSSS---CCEEEECCTTSCCCG-
T ss_pred hcCCCCcCEEEEEeCcchHHHHHHHhc----------CCEEEEEECCHHHHHHHHHHHHhc---cceeeeeeccccccc-
Confidence 456789999999999999999998864 358999999999999999887554 12222222211 000
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
.....||.|+++.. +. .|. ..-....+....++| |||+|+.|.
T Consensus 106 --------~~~~~fD~Vv~~~~------l~-------~~~-------~~~~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 106 --------ELAGHFDFVLNDRL------IN-------RFT-------TEEARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp --------GGTTCCSEEEEESC------GG-------GSC-------HHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred --------ccCCCccEEEEhhh------hH-------hCC-------HHHHHHHHHHHHHhC-cCcEEEEEe
Confidence 01257999998643 11 111 122346788888999 999999873
No 204
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.64 E-value=3.1e-08 Score=105.08 Aligned_cols=116 Identities=14% Similarity=0.141 Sum_probs=85.2
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHc--C--CCCeEEEecCCCCCccc
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRL--N--SPCAIITNHDASVMPNV 250 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rl--g--~~ni~v~~~Da~~~p~~ 250 (646)
...+.+|||+|||.|+.+..++... +...|+++|+|+..++.+++++.++ + .+++.++.+|+..+...
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~--------~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~ 189 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHA--------SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKN 189 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCT--------TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHT
T ss_pred CCCCCEEEEECCCccHHHHHHHHcC--------CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHh
Confidence 3456799999999999998887542 3579999999999999999998764 3 36799999998764211
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
. ....||.|++|++-. .+ +.. . ....+++..+.++|+|||.|+..+.+
T Consensus 190 ~--------~~~~fDlIi~d~~~p-~~-------------~~~--~--l~~~~~l~~~~~~LkpgG~lv~~~~~ 237 (334)
T 1xj5_A 190 A--------AEGSYDAVIVDSSDP-IG-------------PAK--E--LFEKPFFQSVARALRPGGVVCTQAES 237 (334)
T ss_dssp S--------CTTCEEEEEECCCCT-TS-------------GGG--G--GGSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred c--------cCCCccEEEECCCCc-cC-------------cch--h--hhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 0 024799999997611 01 000 0 11357899999999999999987544
No 205
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.64 E-value=4.4e-08 Score=108.81 Aligned_cols=120 Identities=14% Similarity=0.101 Sum_probs=89.4
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEecCCCCCccccc
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS-PCAIITNHDASVMPNVLY 252 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~-~ni~v~~~Da~~~p~~~~ 252 (646)
...++.+|||+|||+|..+..+++. +...|+|+|+++ .++.++++++.+|+ .++.++.+|+..++.
T Consensus 155 ~~~~~~~VLDiGcGtG~la~~la~~---------~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~--- 221 (480)
T 3b3j_A 155 TDFKDKIVLDVGCGSGILSFFAAQA---------GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL--- 221 (480)
T ss_dssp GGTTTCEEEEESCSTTHHHHHHHHT---------TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC---
T ss_pred hhcCCCEEEEecCcccHHHHHHHHc---------CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCcc---
Confidence 4457889999999999999888763 456999999998 88999999999998 579999999876531
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC--CCcccc
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS--LNPLED 330 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS--l~p~EN 330 (646)
...||+|+++++ +.. |.. ......+..+.++|||||+|+.+.++ +.|.+.
T Consensus 222 --------~~~fD~Ivs~~~----~~~---------~~~-------e~~~~~l~~~~~~LkpgG~li~~~~~~~~~pi~~ 273 (480)
T 3b3j_A 222 --------PEQVDIIISEPM----GYM---------LFN-------ERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTD 273 (480)
T ss_dssp --------SSCEEEEECCCC----HHH---------HTC-------HHHHHHHHHGGGGEEEEEEEESCEEEEEEEEECC
T ss_pred --------CCCeEEEEEeCc----hHh---------cCc-------HHHHHHHHHHHHhcCCCCEEEEEeceeeeeccCc
Confidence 147999999765 110 000 11235667888999999999966555 345566
Q ss_pred HHHH
Q psy17365 331 EAVI 334 (646)
Q Consensus 331 E~VV 334 (646)
+...
T Consensus 274 ~~l~ 277 (480)
T 3b3j_A 274 EQLY 277 (480)
T ss_dssp HHHH
T ss_pred hHHH
Confidence 5544
No 206
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.63 E-value=1.7e-07 Score=94.40 Aligned_cols=103 Identities=13% Similarity=0.183 Sum_probs=76.7
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCC
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~ 255 (646)
.++.+|||+|||+|..+..++.. ...|+++|+++..++.+++++ .++.++++|+..++.
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~----------~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~------ 107 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS----------FGTVEGLELSADMLAIARRRN-----PDAVLHHGDMRDFSL------ 107 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT----------SSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTCCC------
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc----------CCeEEEEECCHHHHHHHHhhC-----CCCEEEECChHHCCc------
Confidence 45789999999999999888654 347999999999998887763 368899999987642
Q ss_pred CCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
...||.|++... ++..-++ ......+|.++.++|||||+|+.++
T Consensus 108 -----~~~fD~v~~~~~-----~l~~~~~-------------~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 108 -----GRRFSAVTCMFS-----SIGHLAG-------------QAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp -----SCCEEEEEECTT-----GGGGSCH-------------HHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred -----cCCcCEEEEcCc-----hhhhcCC-------------HHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 257999997421 1211111 1223478999999999999999864
No 207
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.63 E-value=4.5e-08 Score=102.23 Aligned_cols=113 Identities=19% Similarity=0.178 Sum_probs=75.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC------CeEEEecCCCC---
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP------CAIITNHDASV--- 246 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~------ni~v~~~Da~~--- 246 (646)
.+|.+|||+|||+|+-+..++.. +.+.|+|+|+|+..++.++++....+.. ++.+...|+..
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~---------~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~ 117 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYG---------EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTF 117 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHT---------TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSH
T ss_pred CCCCeEEEEecCCcHhHHHHHhc---------CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchh
Confidence 45889999999999866655432 3468999999999999999988776643 24455565521
Q ss_pred ---CccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcC
Q psy17365 247 ---MPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTC 323 (646)
Q Consensus 247 ---~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTC 323 (646)
++.. .....||.|+|-- ++. .-|...+ +..+|.++.++|||||+++.+|+
T Consensus 118 ~~~l~~~--------~~~~~FD~V~~~~------~lh------y~~~~~~-------~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 118 VSSVREV--------FYFGKFNIIDWQF------AIH------YSFHPRH-------YATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp HHHHHTT--------CCSSCEEEEEEES------CGG------GTCSTTT-------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhhhcc--------ccCCCeeEEEECc------hHH------HhCCHHH-------HHHHHHHHHHHcCCCCEEEEEeC
Confidence 1100 0125799998631 111 0111111 24789999999999999998875
Q ss_pred C
Q psy17365 324 S 324 (646)
Q Consensus 324 S 324 (646)
.
T Consensus 171 ~ 171 (302)
T 2vdw_A 171 D 171 (302)
T ss_dssp C
T ss_pred C
Confidence 3
No 208
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.63 E-value=2.5e-08 Score=103.02 Aligned_cols=105 Identities=16% Similarity=0.131 Sum_probs=71.0
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC------CeEEE--ecCCCC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP------CAIIT--NHDASV 246 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~------ni~v~--~~Da~~ 246 (646)
+++|.+|||+|||||+.|..+++. +.|+|+|+++. +.. +...... ++.++ .+|+..
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~-----------~~V~gVD~s~m-~~~----a~~~~~~~~~~~~~v~~~~~~~D~~~ 143 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ-----------PNVREVKAYTL-GTS----GHEKPRLVETFGWNLITFKSKVDVTK 143 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS-----------TTEEEEEEECC-CCT----TSCCCCCCCCTTGGGEEEECSCCGGG
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc-----------CCEEEEECchh-hhh----hhhchhhhhhcCCCeEEEeccCcHhh
Confidence 468999999999999999887742 57999999983 111 1111222 67888 889877
Q ss_pred CccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCC--eEEEEcC
Q psy17365 247 MPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGG--KIAYSTC 323 (646)
Q Consensus 247 ~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG--~LVYSTC 323 (646)
++ ...||.|+||.. ...|. +.. . +..+..+|..+.++||||| .+|..+-
T Consensus 144 l~------------~~~fD~Vvsd~~-~~~~~----~~~---------d--~~~~l~~L~~~~r~LkpGG~~~~v~~~~ 194 (276)
T 2wa2_A 144 ME------------PFQADTVLCDIG-ESNPT----AAV---------E--ASRTLTVLNVISRWLEYNQGCGFCVKVL 194 (276)
T ss_dssp CC------------CCCCSEEEECCC-CCCSC----HHH---------H--HHHHHHHHHHHHHHHHHSTTCEEEEEES
T ss_pred CC------------CCCcCEEEECCC-cCCCc----hhh---------h--HHHHHHHHHHHHHHhccCCCcEEEEEeC
Confidence 54 147999999975 32221 110 0 1112237888999999999 9886543
No 209
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.62 E-value=5.2e-08 Score=104.07 Aligned_cols=144 Identities=16% Similarity=0.161 Sum_probs=97.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC--------CCeEEEecCCCCCc
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS--------PCAIITNHDASVMP 248 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~--------~ni~v~~~Da~~~p 248 (646)
.+.+|||+|+|.|+.+..++.. +...|+++|+|+..++.+++++..++. +++.++.+|+..+.
T Consensus 188 ~pkrVL~IGgG~G~~arellk~---------~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L 258 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKL---------KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVL 258 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT---------CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHC---------CCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHH
Confidence 4579999999999988877643 347899999999999999998754321 26899999998765
Q ss_pred cccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCcc
Q psy17365 249 NVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPL 328 (646)
Q Consensus 249 ~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ 328 (646)
.... .....||+|++|+|-...|. . +..+ .-......++..+.++|+|||.||.-+||.+..
T Consensus 259 ~~~~------~~~~~fDvII~D~~d~P~~~---~--------p~~L-~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~ 320 (364)
T 2qfm_A 259 KRYA------KEGREFDYVINDLTAVPIST---S--------PEED-STWEFLRLILDLSMKVLKQDGKYFTQGNCVNLT 320 (364)
T ss_dssp HHHH------HHTCCEEEEEEECCSSCCCC---C-------------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCH
T ss_pred Hhhh------ccCCCceEEEECCCCcccCc---C--------chhh-hHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchH
Confidence 3210 01257999999997311111 1 1111 123455567777899999999999989998875
Q ss_pred ccHHHHHHHHHHccCcEEE
Q psy17365 329 EDEAVIQRLIVETQGAVQL 347 (646)
Q Consensus 329 ENE~VV~~~L~~~~~~~el 347 (646)
|--....+.|++.-..+..
T Consensus 321 e~~~~~~~~l~~~F~~v~~ 339 (364)
T 2qfm_A 321 EALSLYEEQLGRLYCPVEF 339 (364)
T ss_dssp HHHHHHHHHHTTSSSCEEE
T ss_pred HHHHHHHHHHHHhCCceEE
Confidence 5555555555554444444
No 210
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.62 E-value=4.8e-08 Score=106.25 Aligned_cols=82 Identities=12% Similarity=0.100 Sum_probs=67.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHc--CCCCeEEEecCCCCCccccccC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRL--NSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rl--g~~ni~v~~~Da~~~p~~~~~~ 254 (646)
+|.+|||+|||+|..+..++.. .+.|+|+|+|+.+++.+++|++++ |+.++.++++|+..+....
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~----------g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~--- 159 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK----------ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLI--- 159 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT----------CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHH---
T ss_pred CCCEEEEeCCCchHHHHHHHhc----------CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhc---
Confidence 5899999999999999888753 468999999999999999999999 8888999999998752210
Q ss_pred CCCCCCCCCCCeeecCCCCCCC
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGD 276 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~ 276 (646)
....||.|++|||..+.
T Consensus 160 -----~~~~fDvV~lDPPrr~~ 176 (410)
T 3ll7_A 160 -----KTFHPDYIYVDPARRSG 176 (410)
T ss_dssp -----HHHCCSEEEECCEEC--
T ss_pred -----cCCCceEEEECCCCcCC
Confidence 01369999999998774
No 211
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.62 E-value=2.3e-07 Score=95.47 Aligned_cols=138 Identities=17% Similarity=0.104 Sum_probs=82.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcC-CHHHHHHHHHHH-----HHcCCC-----CeEEEecC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDV-DNNRCYMLVHQA-----KRLNSP-----CAIITNHD 243 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Di-s~~Rl~~L~~n~-----~rlg~~-----ni~v~~~D 243 (646)
..+|.+|||+|||+|..+..++.. +.+.|+|+|+ ++..++.+++|+ +..++. ++.+...|
T Consensus 77 ~~~~~~vLDlG~G~G~~~~~~a~~---------~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~ 147 (281)
T 3bzb_A 77 LIAGKTVCELGAGAGLVSIVAFLA---------GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYR 147 (281)
T ss_dssp GTTTCEEEETTCTTSHHHHHHHHT---------TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECC
T ss_pred hcCCCeEEEecccccHHHHHHHHc---------CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEec
Confidence 457889999999999999877753 3468999999 899999999999 555553 67777555
Q ss_pred CCCCccccccCCCCCCCCCCCCeeec-CCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhc---c--CCe
Q psy17365 244 ASVMPNVLYTDADGNKVPMKFDRVLC-DVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLA---V--GGK 317 (646)
Q Consensus 244 a~~~p~~~~~~~~g~~~~~~FD~IL~-D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLK---p--GG~ 317 (646)
......... .. .....||.|++ |+... .+ ....++..+.++|+ | ||+
T Consensus 148 ~~~~~~~~~---~~-~~~~~fD~Ii~~dvl~~-------~~----------------~~~~ll~~l~~~Lk~~~p~~gG~ 200 (281)
T 3bzb_A 148 WGDSPDSLQ---RC-TGLQRFQVVLLADLLSF-------HQ----------------AHDALLRSVKMLLALPANDPTAV 200 (281)
T ss_dssp TTSCTHHHH---HH-HSCSSBSEEEEESCCSC-------GG----------------GHHHHHHHHHHHBCCTTTCTTCE
T ss_pred CCCccHHHH---hh-ccCCCCCEEEEeCcccC-------hH----------------HHHHHHHHHHHHhcccCCCCCCE
Confidence 433211000 00 01257999987 65521 01 12467888899999 9 997
Q ss_pred EEEEcCCCCcc---ccHHHHHHHHHHccCcEEEeec
Q psy17365 318 IAYSTCSLNPL---EDEAVIQRLIVETQGAVQLVDV 350 (646)
Q Consensus 318 LVYSTCSl~p~---ENE~VV~~~L~~~~~~~elv~~ 350 (646)
++.+.+...+. ..+..+ ..+++.+ .++++.+
T Consensus 201 l~v~~~~~~~~~~~~~~~~~-~~l~~~G-~f~v~~~ 234 (281)
T 3bzb_A 201 ALVTFTHHRPHLAERDLAFF-RLVNADG-ALIAEPW 234 (281)
T ss_dssp EEEEECC--------CTHHH-HHHHHST-TEEEEEE
T ss_pred EEEEEEeeecccchhHHHHH-HHHHhcC-CEEEEEe
Confidence 66553443321 223333 3555553 1455443
No 212
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.62 E-value=6.6e-08 Score=101.68 Aligned_cols=136 Identities=14% Similarity=0.050 Sum_probs=90.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHc--C--CCCeEEEecCCCCCccccc
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRL--N--SPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rl--g--~~ni~v~~~Da~~~p~~~~ 252 (646)
.+.+|||+|||.|+.+..++... +.+.|+++|+|+..++.+++++..+ + .+++.++.+|+..+...
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~--------~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~-- 177 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHE--------SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN-- 177 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCT--------TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH--
T ss_pred CCCEEEEEcCCcCHHHHHHHHcC--------CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHh--
Confidence 45799999999999999887542 4679999999999999999987654 2 36799999998764221
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCC-ccccH
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLN-PLEDE 331 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~-p~ENE 331 (646)
....||.|++|++.. .+ |. . .-...+++..+.++|+|||+|+..+.+.. ..+.-
T Consensus 178 -------~~~~fD~Ii~d~~~~-~~-----~~----------~--~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~ 232 (314)
T 2b2c_A 178 -------HKNEFDVIITDSSDP-VG-----PA----------E--SLFGQSYYELLRDALKEDGILSSQGESVWLHLPLI 232 (314)
T ss_dssp -------CTTCEEEEEECCC-------------------------------HHHHHHHHEEEEEEEEEECCCTTTCHHHH
T ss_pred -------cCCCceEEEEcCCCC-CC-----cc----------h--hhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHH
Confidence 125799999998621 11 10 0 01125789999999999999998765532 12222
Q ss_pred HHHHHHHHHccCcEEE
Q psy17365 332 AVIQRLIVETQGAVQL 347 (646)
Q Consensus 332 ~VV~~~L~~~~~~~el 347 (646)
..+.+.+++.-..+.+
T Consensus 233 ~~~~~~l~~vF~~v~~ 248 (314)
T 2b2c_A 233 AHLVAFNRKIFPAVTY 248 (314)
T ss_dssp HHHHHHHHHHCSEEEE
T ss_pred HHHHHHHHHHCCcceE
Confidence 3344445544333443
No 213
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.61 E-value=6.6e-08 Score=100.92 Aligned_cols=133 Identities=19% Similarity=0.141 Sum_probs=91.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHH----cCCCCeEEEecCCCCCcccc
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKR----LNSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~r----lg~~ni~v~~~Da~~~p~~~ 251 (646)
.++.+|||+|||.|+.+..++... +.+.|+++|+|+..++.+++++.. +..+++.++.+|+..++...
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~--------~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~ 165 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHG--------TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQT 165 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCT--------TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSS
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhc
Confidence 466899999999999999887542 356999999999999999988743 23467999999987654210
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC-CCcccc
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS-LNPLED 330 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS-l~p~EN 330 (646)
....||+|++|++... + |. .. -.+.+++..+.++|||||+|+..+.+ +...+.
T Consensus 166 --------~~~~fDvIi~d~~~~~-~-----~~-------~~-----l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~ 219 (304)
T 3bwc_A 166 --------PDNTYDVVIIDTTDPA-G-----PA-------SK-----LFGEAFYKDVLRILKPDGICCNQGESIWLDLEL 219 (304)
T ss_dssp --------CTTCEEEEEEECC---------------------------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHH
T ss_pred --------cCCceeEEEECCCCcc-c-----cc-------hh-----hhHHHHHHHHHHhcCCCcEEEEecCCcccchHH
Confidence 1257999999976311 1 10 00 01247889999999999999986544 222233
Q ss_pred HHHHHHHHHHcc
Q psy17365 331 EAVIQRLIVETQ 342 (646)
Q Consensus 331 E~VV~~~L~~~~ 342 (646)
...+.+.|++.+
T Consensus 220 ~~~~~~~l~~~G 231 (304)
T 3bwc_A 220 IEKMSRFIRETG 231 (304)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHhCC
Confidence 444555566653
No 214
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.60 E-value=4.3e-07 Score=96.46 Aligned_cols=110 Identities=17% Similarity=0.142 Sum_probs=85.6
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEecCCCCCcccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CAIITNHDASVMPNVL 251 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni~v~~~Da~~~p~~~ 251 (646)
+++.++.+|||+|||+|..+..+++.. +...++++|+ +..++.+++++...+.. ++.+..+|+....
T Consensus 178 ~~~~~~~~vlDvG~G~G~~~~~l~~~~--------~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--- 245 (374)
T 1qzz_A 178 YDWSAVRHVLDVGGGNGGMLAAIALRA--------PHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPL--- 245 (374)
T ss_dssp SCCTTCCEEEEETCTTSHHHHHHHHHC--------TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC---
T ss_pred CCCCCCCEEEEECCCcCHHHHHHHHHC--------CCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcC---
Confidence 456788999999999999999999874 4678999999 99999999999988876 7999999986410
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcC
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTC 323 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTC 323 (646)
+..||.|++... +..|... ...++|.++.++|||||+|+....
T Consensus 246 ---------~~~~D~v~~~~v-------------l~~~~~~-------~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 246 ---------PVTADVVLLSFV-------------LLNWSDE-------DALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp ---------SCCEEEEEEESC-------------GGGSCHH-------HHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ---------CCCCCEEEEecc-------------ccCCCHH-------HHHHHHHHHHHhcCCCcEEEEEec
Confidence 124999997421 1123211 224789999999999999988765
No 215
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.60 E-value=2.7e-08 Score=101.73 Aligned_cols=121 Identities=17% Similarity=0.162 Sum_probs=84.9
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcC----CCCeEEEecCCCCCc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLN----SPCAIITNHDASVMP 248 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg----~~ni~v~~~Da~~~p 248 (646)
+...++.+|||+|||+|..+..+++. ...|+|+|+|+..++.+++++...+ ..++.+..+|+..++
T Consensus 53 l~~~~~~~vLDiGcG~G~~~~~l~~~----------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~ 122 (293)
T 3thr_A 53 LRQHGCHRVLDVACGTGVDSIMLVEE----------GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLD 122 (293)
T ss_dssp HHHTTCCEEEETTCTTSHHHHHHHHT----------TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHH
T ss_pred hcccCCCEEEEecCCCCHHHHHHHHC----------CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCc
Confidence 44567889999999999999988765 2389999999999999998875443 246778888887654
Q ss_pred cccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 249 NVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 249 ~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
... .....||.|+|... ++..-++... -......+|.++.++|||||+|+.++++
T Consensus 123 ~~~-------~~~~~fD~V~~~g~-----~l~~~~~~~~---------~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 123 KDV-------PAGDGFDAVICLGN-----SFAHLPDSKG---------DQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp HHS-------CCTTCEEEEEECTT-----CGGGSCCSSS---------SSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ccc-------ccCCCeEEEEEcCh-----HHhhcCcccc---------CHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 110 01257999997311 1222222100 0122457899999999999999988765
No 216
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.60 E-value=4.9e-08 Score=102.45 Aligned_cols=117 Identities=18% Similarity=0.230 Sum_probs=84.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHc-----CCCCeEEEecCCCCCccc
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRL-----NSPCAIITNHDASVMPNV 250 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rl-----g~~ni~v~~~Da~~~p~~ 250 (646)
..+.+|||+|||.|+.+..++... +...|+++|+|+..++.+++++..+ ..+++.++.+|+..+...
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~--------~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~ 147 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHP--------TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLER 147 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTST--------TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcC--------CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHh
Confidence 345799999999999998887642 3568999999999999999987652 246899999998764211
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
....||.|++|++... +. ..| ...+ ...+++..+.++|||||+|+..+.+
T Consensus 148 ---------~~~~fD~Ii~d~~~~~-~~--~~~----------~~~l--~~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 148 ---------TEERYDVVIIDLTDPV-GE--DNP----------ARLL--YTVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp ---------CCCCEEEEEEECCCCB-ST--TCG----------GGGG--SSHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ---------cCCCccEEEECCCCcc-cc--cCc----------chhc--cHHHHHHHHHHhcCCCcEEEEEccC
Confidence 1257999999987321 00 000 0000 1247889999999999999987544
No 217
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.60 E-value=1.1e-07 Score=100.13 Aligned_cols=113 Identities=14% Similarity=0.117 Sum_probs=84.6
Q ss_pred CeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCCC
Q psy17365 179 HKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADGN 258 (646)
Q Consensus 179 ~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g~ 258 (646)
.+|||+|||.|+.+..+++.. +...|+++|+|+..++.+++++.....+++.++.+|+..+....
T Consensus 91 ~rVLdIG~G~G~la~~la~~~--------p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~------- 155 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVY--------PQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESF------- 155 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHS--------TTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTC-------
T ss_pred CEEEEEECCcCHHHHHHHHHC--------CCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhc-------
Confidence 389999999999999998864 45689999999999999988765544568999999997653211
Q ss_pred CCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 259 KVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 259 ~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
....||.|++|++.. .+. |.. + ...+.+..+.++|+|||+||..+.+-
T Consensus 156 -~~~~fDvIi~D~~~~-~~~----~~~--------L-----~t~efl~~~~r~LkpgGvlv~~~~~~ 203 (317)
T 3gjy_A 156 -TPASRDVIIRDVFAG-AIT----PQN--------F-----TTVEFFEHCHRGLAPGGLYVANCGDH 203 (317)
T ss_dssp -CTTCEEEEEECCSTT-SCC----CGG--------G-----SBHHHHHHHHHHEEEEEEEEEEEEEC
T ss_pred -cCCCCCEEEECCCCc-ccc----chh--------h-----hHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 125799999997632 121 111 0 11368899999999999999877654
No 218
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.59 E-value=2.1e-07 Score=91.67 Aligned_cols=106 Identities=14% Similarity=0.102 Sum_probs=79.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCC
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~ 255 (646)
.++.+|||+|||+|..+..+++.. ..|+++|+++..++.++++. +++.+.++|+..++.
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~----------~~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~------ 97 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF----------GDTAGLELSEDMLTHARKRL-----PDATLHQGDMRDFRL------ 97 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH----------SEEEEEESCHHHHHHHHHHC-----TTCEEEECCTTTCCC------
T ss_pred CCCCeEEEecccCCHHHHHHHHhC----------CcEEEEeCCHHHHHHHHHhC-----CCCEEEECCHHHccc------
Confidence 567899999999999999998763 27999999999998887653 568889999876542
Q ss_pred CCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
...||.|+|- . +++...++ ......+|.++.++|||||+++.+++..
T Consensus 98 -----~~~~D~v~~~----~-~~~~~~~~-------------~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 98 -----GRKFSAVVSM----F-SSVGYLKT-------------TEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp -----SSCEEEEEEC----T-TGGGGCCS-------------HHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred -----CCCCcEEEEc----C-chHhhcCC-------------HHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 2479999952 1 11111111 1233578999999999999999887654
No 219
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.59 E-value=6.3e-08 Score=97.02 Aligned_cols=142 Identities=8% Similarity=0.006 Sum_probs=93.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC--------------------
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS-------------------- 234 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~-------------------- 234 (646)
..++.+|||+|||+|..+..++.. ....|+++|+++..++.+++++...+.
T Consensus 54 ~~~~~~vLDlGcG~G~~~~~l~~~---------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQLLSACE---------SFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMK 124 (265)
T ss_dssp SCCEEEEEEESCTTCCGGGTTGGG---------TEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSC
T ss_pred ccCCCEEEEECCCccHHHHHHhhc---------ccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccc
Confidence 356789999999999988777643 235899999999999999887754321
Q ss_pred ---------CCe-EEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHH
Q psy17365 235 ---------PCA-IITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRI 304 (646)
Q Consensus 235 ---------~ni-~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~I 304 (646)
.++ .+...|+...+... + .....||.|++.. ++.. +..-......+
T Consensus 125 ~~~~~~~l~~~v~~~~~~d~~~~~~~~----~--~~~~~fD~v~~~~------~l~~------------~~~~~~~~~~~ 180 (265)
T 2i62_A 125 GPEKEEKLRRAIKQVLKCDVTQSQPLG----G--VSLPPADCLLSTL------CLDA------------ACPDLPAYRTA 180 (265)
T ss_dssp HHHHHHHHHHHEEEEEECCTTSSSTTT----T--CCCCCEEEEEEES------CHHH------------HCSSHHHHHHH
T ss_pred hHHHHHHhhhhheeEEEeeeccCCCCC----c--cccCCccEEEEhh------hhhh------------hcCChHHHHHH
Confidence 016 78888887653210 0 1125799999731 1110 00012234578
Q ss_pred HHHHHHhhccCCeEEEEcCCC------------CccccHHHHHHHHHHccCcEEEeecc
Q psy17365 305 VKRGVEMLAVGGKIAYSTCSL------------NPLEDEAVIQRLIVETQGAVQLVDVS 351 (646)
Q Consensus 305 L~~A~~lLKpGG~LVYSTCSl------------~p~ENE~VV~~~L~~~~~~~elv~~~ 351 (646)
|.++.++|||||+|+.++..- ...-+++.+..+|++.+ |+++.+.
T Consensus 181 l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG--f~~~~~~ 237 (265)
T 2i62_A 181 LRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAG--YTIEQFE 237 (265)
T ss_dssp HHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTT--CEEEEEE
T ss_pred HHHHHhhCCCCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHHHCC--CEEEEEE
Confidence 999999999999999876321 01125667778888775 6666544
No 220
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.58 E-value=2.1e-07 Score=96.64 Aligned_cols=118 Identities=15% Similarity=0.107 Sum_probs=82.9
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHc-------CCCCeEEEecCCCCCc
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRL-------NSPCAIITNHDASVMP 248 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rl-------g~~ni~v~~~Da~~~p 248 (646)
.++.+|||+|||+|..+..+++. +...|+++|+++..++.++++.... +..++.++++|+..++
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~---------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 103 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG---------RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKEL 103 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT---------TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSC
T ss_pred CCCCEEEEECCCCcHHHHHHHhc---------CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccc
Confidence 47789999999999999988763 3568999999999999999988765 4457889999998764
Q ss_pred cccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 249 NVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 249 ~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
.... .. .....||.|++... + .|...+ ......+|.++.++|||||.++.+|..
T Consensus 104 ~~~~-~~---~~~~~fD~V~~~~~------l--------~~~~~~----~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 104 LIDK-FR---DPQMCFDICSCQFV------C--------HYSFES----YEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp STTT-CS---STTCCEEEEEEETC------G--------GGGGGS----HHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred hhhh-cc---cCCCCEEEEEEecc------h--------hhccCC----HHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 1000 00 01247999997321 1 111000 122347899999999999999988654
No 221
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.57 E-value=2.4e-07 Score=92.16 Aligned_cols=114 Identities=10% Similarity=0.044 Sum_probs=81.7
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccccc
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYT 253 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~ 253 (646)
.+.++.+|||+|||+|..+..++... . .|+++|+|+..++.+++++ ...++.++++|+..++....
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~---------~-~v~gvD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~~- 118 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFF---------P-RVIGLDVSKSALEIAAKEN---TAANISYRLLDGLVPEQAAQ- 118 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHS---------S-CEEEEESCHHHHHHHHHHS---CCTTEEEEECCTTCHHHHHH-
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhC---------C-CEEEEECCHHHHHHHHHhC---cccCceEEECcccccccccc-
Confidence 35788999999999999999998762 2 7999999999998887765 44578999999887542110
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
. .....||.|++...... -+ +. ....+|.++.++|||||+|+.++.+.
T Consensus 119 -~---~~~~~~d~v~~~~~~~~------~~-------~~-------~~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 119 -I---HSEIGDANIYMRTGFHH------IP-------VE-------KRELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp -H---HHHHCSCEEEEESSSTT------SC-------GG-------GHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred -c---ccccCccEEEEcchhhc------CC-------HH-------HHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 0 00124899998643211 11 00 12478999999999999988776554
No 222
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.57 E-value=1e-07 Score=102.58 Aligned_cols=117 Identities=14% Similarity=0.156 Sum_probs=86.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC-eEEEecCCCCCccccccCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC-AIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n-i~v~~~Da~~~p~~~~~~~ 255 (646)
+|.+|||++||+|..+..+|++ +...|+|+|.++ .+..++++++.+|..+ |.++++|+..+..
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~a---------GA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~l------ 146 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQA---------GARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVEL------ 146 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT---------TCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCC------
T ss_pred CCCEEEEeCCCccHHHHHHHHh---------CCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecC------
Confidence 6889999999999988777654 466899999996 6788999999999864 8899999876521
Q ss_pred CCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC--CCccccHHH
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS--LNPLEDEAV 333 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS--l~p~ENE~V 333 (646)
+.+||+|+++.- |.+.+. .. ....++...-++|||||.++-+.|+ +.|.|.+..
T Consensus 147 -----pe~~DvivsE~~--~~~l~~--e~---------------~l~~~l~a~~r~Lkp~G~~iP~~atly~apie~~~l 202 (376)
T 4hc4_A 147 -----PEQVDAIVSEWM--GYGLLH--ES---------------MLSSVLHARTKWLKEGGLLLPASAELFIVPISDQML 202 (376)
T ss_dssp -----SSCEEEEECCCC--BTTBTT--TC---------------SHHHHHHHHHHHEEEEEEEESCEEEEEEEEECCHHH
T ss_pred -----CccccEEEeecc--cccccc--cc---------------hhhhHHHHHHhhCCCCceECCccceEEEEEeccchh
Confidence 357999998643 222111 11 1124566667899999999988777 557787644
No 223
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.54 E-value=1e-06 Score=95.33 Aligned_cols=92 Identities=11% Similarity=0.087 Sum_probs=71.9
Q ss_pred cccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCC------------------------------CCCCCcEEEEEcCCHH
Q psy17365 171 LLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADS------------------------------NPVPSGLVVANDVDNN 220 (646)
Q Consensus 171 ~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~------------------------------~~~~~G~VvA~Dis~~ 220 (646)
.+++..++..|||.|||+|..++.+|.+...... .......|+++|+|+.
T Consensus 195 ~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ 274 (393)
T 3k0b_A 195 LLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDAR 274 (393)
T ss_dssp HHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHH
T ss_pred HHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHH
Confidence 3456788999999999999999888876431000 0001256999999999
Q ss_pred HHHHHHHHHHHcCCCC-eEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCC
Q psy17365 221 RCYMLVHQAKRLNSPC-AIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPC 273 (646)
Q Consensus 221 Rl~~L~~n~~rlg~~n-i~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PC 273 (646)
.++.++.|+++.|+.+ +.+.+.|+..++. ...||.|++|||.
T Consensus 275 al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~-----------~~~fD~Iv~NPPY 317 (393)
T 3k0b_A 275 LIEIAKQNAVEAGLGDLITFRQLQVADFQT-----------EDEYGVVVANPPY 317 (393)
T ss_dssp HHHHHHHHHHHTTCTTCSEEEECCGGGCCC-----------CCCSCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCceEEEECChHhCCC-----------CCCCCEEEECCCC
Confidence 9999999999999874 8999999987642 1479999999995
No 224
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.54 E-value=1.1e-07 Score=96.24 Aligned_cols=103 Identities=13% Similarity=0.064 Sum_probs=76.6
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~ 252 (646)
+.+.++.+|||+|||+|..+..+++ +.+.|+++|+++..+..++.+. ++.+...|+..++.
T Consensus 30 ~~~~~~~~vLDiGcG~G~~~~~l~~----------~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~d~~~~~~--- 90 (261)
T 3ege_A 30 LNLPKGSVIADIGAGTGGYSVALAN----------QGLFVYAVEPSIVMRQQAVVHP------QVEWFTGYAENLAL--- 90 (261)
T ss_dssp HCCCTTCEEEEETCTTSHHHHHHHT----------TTCEEEEECSCHHHHHSSCCCT------TEEEECCCTTSCCS---
T ss_pred hCCCCCCEEEEEcCcccHHHHHHHh----------CCCEEEEEeCCHHHHHHHHhcc------CCEEEECchhhCCC---
Confidence 4567889999999999999998875 2569999999997766543322 78999999977642
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
....||.|++... +..-++ ...+|.++.++|| ||+++..++.
T Consensus 91 -------~~~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 91 -------PDKSVDGVISILA------IHHFSH----------------LEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp -------CTTCBSEEEEESC------GGGCSS----------------HHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred -------CCCCEeEEEEcch------HhhccC----------------HHHHHHHHHHHhC-CcEEEEEEcC
Confidence 1257999997432 111122 1378999999999 9988888765
No 225
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.54 E-value=5.8e-07 Score=93.73 Aligned_cols=111 Identities=17% Similarity=0.085 Sum_probs=85.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEecCCCCCccccccC
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni~v~~~Da~~~p~~~~~~ 254 (646)
.++.+|||+|||+|..+..+++.. +...++++|++ ..++.+++++...+.. ++.+..+|+...+.
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~--------p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----- 229 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHN--------PNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDY----- 229 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHC--------TTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCC-----
T ss_pred CCCCEEEEECCCcCHHHHHHHHHC--------CCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCC-----
Confidence 778899999999999999998874 46799999999 9999999999988876 59999999875421
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCC
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLN 326 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~ 326 (646)
...||.|++--. ...|.. ....++|.++.++|+|||+|+.......
T Consensus 230 ------~~~~D~v~~~~~-------------l~~~~~-------~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 230 ------GNDYDLVLLPNF-------------LHHFDV-------ATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp ------CSCEEEEEEESC-------------GGGSCH-------HHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred ------CCCCcEEEEcch-------------hccCCH-------HHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 124999997211 112221 1235789999999999998887765543
No 226
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.53 E-value=3.4e-07 Score=102.83 Aligned_cols=175 Identities=13% Similarity=0.114 Sum_probs=114.4
Q ss_pred ccccEEEecccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCC-----CCCcEEEEEcCCHHHHHHHHHHH
Q psy17365 155 ATGHISRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNP-----VPSGLVVANDVDNNRCYMLVHQA 229 (646)
Q Consensus 155 ~~G~i~~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~-----~~~G~VvA~Dis~~Rl~~L~~n~ 229 (646)
+.|-|+--...+.+.+.++++++|++|+|-|||+|+..+++++.+....... .....+++.|+++....+++-|+
T Consensus 195 ~~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl 274 (530)
T 3ufb_A 195 DSGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNL 274 (530)
T ss_dssp SCCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHH
T ss_pred cCceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHH
Confidence 4576666666666777889999999999999999999999888775321100 01246999999999999999888
Q ss_pred HHcCCCCeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHH
Q psy17365 230 KRLNSPCAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGV 309 (646)
Q Consensus 230 ~rlg~~ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~ 309 (646)
--.|.....+..+|....+.... ....+||+||.+||.++... .+...++. ........+...+.+++
T Consensus 275 ~lhg~~~~~I~~~dtL~~~~~~~------~~~~~fD~Il~NPPf~~~~~----~~~~~~~~--~~~~~~~~~~~Fl~~~l 342 (530)
T 3ufb_A 275 LLHGLEYPRIDPENSLRFPLREM------GDKDRVDVILTNPPFGGEEE----KGILGNFP--EDMQTAETAMLFLQLIM 342 (530)
T ss_dssp HHHTCSCCEEECSCTTCSCGGGC------CGGGCBSEEEECCCSSCBCC----HHHHTTSC--GGGCCCBHHHHHHHHHH
T ss_pred HhcCCccccccccccccCchhhh------cccccceEEEecCCCCcccc----ccccccCc--hhcccchhHHHHHHHHH
Confidence 87787766677888765442211 11357999999999976431 11111111 01112234556677888
Q ss_pred Hhhc-------cCCeEEEEcCC--CCccccHHHHHHHHHHc
Q psy17365 310 EMLA-------VGGKIAYSTCS--LNPLEDEAVIQRLIVET 341 (646)
Q Consensus 310 ~lLK-------pGG~LVYSTCS--l~p~ENE~VV~~~L~~~ 341 (646)
..|| +||++++.+-. +...-.+.-|.+.|-+.
T Consensus 343 ~~Lk~~~~~l~~gGr~avVlP~g~Lf~~~~~~~iRk~Lle~ 383 (530)
T 3ufb_A 343 RKLKRPGHGSDNGGRAAVVVPNGTLFSDGISARIKEELLKN 383 (530)
T ss_dssp HHBCCTTSSSSSCCEEEEEEEHHHHHCCTHHHHHHHHHHHH
T ss_pred HHhhhhhhccCCCceEEEEecchhhhccchHHHHHHHHhhc
Confidence 8887 69998876542 33333345566555444
No 227
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.52 E-value=1e-07 Score=97.24 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=75.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
.+.+|||+|||+|..|..|++. ...|+|+|+|+..++.++ ..+++.+..+|+..++-
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~----------~~~v~gvD~s~~ml~~a~------~~~~v~~~~~~~e~~~~------- 95 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEF----------FERVHAVDPGEAQIRQAL------RHPRVTYAVAPAEDTGL------- 95 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTT----------CSEEEEEESCHHHHHTCC------CCTTEEEEECCTTCCCC-------
T ss_pred CCCCEEEEcCCCCHHHHHHHHh----------CCEEEEEeCcHHhhhhhh------hcCCceeehhhhhhhcc-------
Confidence 3568999999999999888754 358999999998875443 24689999999987652
Q ss_pred CCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCcc
Q psy17365 257 GNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPL 328 (646)
Q Consensus 257 g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ 328 (646)
....||.|++-- ++ .|-. ..+.+.++.++|||||+|+..+.+....
T Consensus 96 ---~~~sfD~v~~~~------~~--------h~~~---------~~~~~~e~~rvLkpgG~l~~~~~~~~~~ 141 (257)
T 4hg2_A 96 ---PPASVDVAIAAQ------AM--------HWFD---------LDRFWAELRRVARPGAVFAAVTYGLTRV 141 (257)
T ss_dssp ---CSSCEEEEEECS------CC--------TTCC---------HHHHHHHHHHHEEEEEEEEEEEECCCBC
T ss_pred ---cCCcccEEEEee------eh--------hHhh---------HHHHHHHHHHHcCCCCEEEEEECCCCCC
Confidence 125799999721 11 1211 0246889999999999999887765443
No 228
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.52 E-value=2.3e-07 Score=90.09 Aligned_cols=99 Identities=17% Similarity=0.131 Sum_probs=74.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
++.+|||+|||+|..+..+ + ...|+++|+++..++.++++. .++.+.+.|+..++.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~--------~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~------- 91 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----P--------YPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEALPF------- 91 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----C--------CSEEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSCCS-------
T ss_pred CCCeEEEECCCCCHhHHhC----C--------CCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccCCC-------
Confidence 7889999999999887765 2 237999999999998887765 678888999877541
Q ss_pred CCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 257 GNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 257 g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
....||.|++... +...++ ...+|.++.++|||||+++.++..
T Consensus 92 ---~~~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 92 ---PGESFDVVLLFTT------LEFVED----------------VERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp ---CSSCEEEEEEESC------TTTCSC----------------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ---CCCcEEEEEEcCh------hhhcCC----------------HHHHHHHHHHHcCCCCEEEEEecC
Confidence 1257999997532 221121 237899999999999999988754
No 229
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.52 E-value=2.4e-06 Score=89.49 Aligned_cols=113 Identities=12% Similarity=0.052 Sum_probs=86.0
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEecCCCCCcccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS-PCAIITNHDASVMPNVL 251 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~-~ni~v~~~Da~~~p~~~ 251 (646)
++..++.+|||+|||+|..+..+++.. +...++++|+ +..+..+++++...+. .++.+..+|+....
T Consensus 165 ~~~~~~~~vlDvG~G~G~~~~~l~~~~--------p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--- 232 (332)
T 3i53_A 165 YDWAALGHVVDVGGGSGGLLSALLTAH--------EDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPL--- 232 (332)
T ss_dssp SCCGGGSEEEEETCTTSHHHHHHHHHC--------TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC---
T ss_pred CCCCCCCEEEEeCCChhHHHHHHHHHC--------CCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCC---
Confidence 345667899999999999999998875 4668999999 9999999999988886 57999999985210
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCC
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLN 326 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~ 326 (646)
+..||.|++-- ++..|.. ..+.++|+++.+.|+|||+|+.......
T Consensus 233 ---------p~~~D~v~~~~-------------vlh~~~~-------~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 278 (332)
T 3i53_A 233 ---------PAGAGGYVLSA-------------VLHDWDD-------LSAVAILRRCAEAAGSGGVVLVIEAVAG 278 (332)
T ss_dssp ---------CCSCSEEEEES-------------CGGGSCH-------HHHHHHHHHHHHHHTTTCEEEEEECCCC
T ss_pred ---------CCCCcEEEEeh-------------hhccCCH-------HHHHHHHHHHHHhcCCCCEEEEEeecCC
Confidence 12699999721 2223332 1245899999999999999988765443
No 230
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.52 E-value=1.6e-06 Score=93.61 Aligned_cols=91 Identities=11% Similarity=0.085 Sum_probs=71.5
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCC------------------------------CCCCCcEEEEEcCCHHH
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADS------------------------------NPVPSGLVVANDVDNNR 221 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~------------------------------~~~~~G~VvA~Dis~~R 221 (646)
++...++..|||.|||+|+.++.+|.+...... .......|+++|+|+..
T Consensus 190 ~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~a 269 (385)
T 3ldu_A 190 LTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEES 269 (385)
T ss_dssp TSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHH
T ss_pred hhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHH
Confidence 456778999999999999999988876421000 00023579999999999
Q ss_pred HHHHHHHHHHcCCC-CeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCC
Q psy17365 222 CYMLVHQAKRLNSP-CAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPC 273 (646)
Q Consensus 222 l~~L~~n~~rlg~~-ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PC 273 (646)
++.++.|+++.|+. ++.+.+.|+..++. ...||.|++|||.
T Consensus 270 i~~Ar~Na~~~gl~~~i~~~~~D~~~l~~-----------~~~~D~Iv~NPPy 311 (385)
T 3ldu_A 270 IDIARENAEIAGVDEYIEFNVGDATQFKS-----------EDEFGFIITNPPY 311 (385)
T ss_dssp HHHHHHHHHHHTCGGGEEEEECCGGGCCC-----------SCBSCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCceEEEECChhhcCc-----------CCCCcEEEECCCC
Confidence 99999999999986 68999999987642 2479999999994
No 231
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.51 E-value=1.1e-06 Score=93.15 Aligned_cols=112 Identities=13% Similarity=0.094 Sum_probs=86.6
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC-eEEEecCCCCCcccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC-AIITNHDASVMPNVL 251 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n-i~v~~~Da~~~p~~~ 251 (646)
++..++.+|||+|||+|..+..+++.. +...++++|+ +..++.++++++..+..+ +.++.+|+...+.
T Consensus 186 ~~~~~~~~vLDvG~G~G~~~~~l~~~~--------p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-- 254 (359)
T 1x19_A 186 AKLDGVKKMIDVGGGIGDISAAMLKHF--------PELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESY-- 254 (359)
T ss_dssp CCCTTCCEEEEESCTTCHHHHHHHHHC--------TTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCC--
T ss_pred cCCCCCCEEEEECCcccHHHHHHHHHC--------CCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCC--
Confidence 456788999999999999999999874 4678999999 999999999999988765 9999999876431
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
..+|.|++.- ++..|.. ....++|+++.+.|||||+|+......
T Consensus 255 ----------~~~D~v~~~~-------------vlh~~~d-------~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 255 ----------PEADAVLFCR-------------ILYSANE-------QLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp ----------CCCSEEEEES-------------CGGGSCH-------HHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred ----------CCCCEEEEec-------------hhccCCH-------HHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 2349998732 1122322 223578999999999999997765443
No 232
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.51 E-value=1.1e-06 Score=92.97 Aligned_cols=111 Identities=20% Similarity=0.180 Sum_probs=85.3
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEecCCCCCcccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CAIITNHDASVMPNVL 251 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni~v~~~Da~~~p~~~ 251 (646)
++..++.+|||+|||+|..+..+++.. +...++++|+ +..++.+++++...+.. ++.+..+|+....
T Consensus 179 ~~~~~~~~vLDvG~G~G~~~~~l~~~~--------~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--- 246 (360)
T 1tw3_A 179 YDWTNVRHVLDVGGGKGGFAAAIARRA--------PHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPL--- 246 (360)
T ss_dssp SCCTTCSEEEEETCTTSHHHHHHHHHC--------TTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCC---
T ss_pred CCCccCcEEEEeCCcCcHHHHHHHHhC--------CCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCC---
Confidence 456788999999999999999998874 4668999999 99999999999988876 7999999985411
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
+..||.|++... +..|... ...++|+++.++|||||+|+.+...
T Consensus 247 ---------~~~~D~v~~~~v-------------l~~~~~~-------~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 247 ---------PRKADAIILSFV-------------LLNWPDH-------DAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp ---------SSCEEEEEEESC-------------GGGSCHH-------HHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ---------CCCccEEEEccc-------------ccCCCHH-------HHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 124999987422 1122211 1247899999999999999987654
No 233
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.51 E-value=1.1e-06 Score=94.75 Aligned_cols=91 Identities=8% Similarity=-0.014 Sum_probs=71.4
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCC------------------------------CCCCCcEEEEEcCCHHH
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADS------------------------------NPVPSGLVVANDVDNNR 221 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~------------------------------~~~~~G~VvA~Dis~~R 221 (646)
+...+++..|||.|||+|+..+.+|.+...... .......|+++|+|+..
T Consensus 189 l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~a 268 (384)
T 3ldg_A 189 LSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRM 268 (384)
T ss_dssp HTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHH
T ss_pred HhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHH
Confidence 446788999999999999999888866431000 00012569999999999
Q ss_pred HHHHHHHHHHcCCCC-eEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCC
Q psy17365 222 CYMLVHQAKRLNSPC-AIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPC 273 (646)
Q Consensus 222 l~~L~~n~~rlg~~n-i~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PC 273 (646)
++.+++|+++.|+.+ +.+.+.|+..++. ...||.|++|||+
T Consensus 269 l~~Ar~Na~~~gl~~~I~~~~~D~~~l~~-----------~~~fD~Iv~NPPY 310 (384)
T 3ldg_A 269 VEIARKNAREVGLEDVVKLKQMRLQDFKT-----------NKINGVLISNPPY 310 (384)
T ss_dssp HHHHHHHHHHTTCTTTEEEEECCGGGCCC-----------CCCSCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCceEEEECChHHCCc-----------cCCcCEEEECCch
Confidence 999999999999875 8999999987642 1369999999996
No 234
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.51 E-value=6.8e-08 Score=94.56 Aligned_cols=101 Identities=10% Similarity=-0.034 Sum_probs=74.9
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEecCCCCCccccccC
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni~v~~~Da~~~p~~~~~~ 254 (646)
.+.++|||++||.|..+..++... |...++|+|+|+..++.+++++.++|.. ++.+ .|....+
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~--------p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~------ 111 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNEN--------EKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDV------ 111 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSS--------CCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHH------
T ss_pred CCCCeEEEecCCCCHHHHHHHhcC--------CCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccC------
Confidence 446799999999999988876542 4569999999999999999999999998 5655 4432211
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEE
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIA 319 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LV 319 (646)
....||.||+- ++..+..-+...+.+.++.|+|||.+|
T Consensus 112 -----~~~~~DvVLa~----------------------k~LHlL~~~~~al~~v~~~L~pggvfI 149 (200)
T 3fzg_A 112 -----YKGTYDVVFLL----------------------KMLPVLKQQDVNILDFLQLFHTQNFVI 149 (200)
T ss_dssp -----TTSEEEEEEEE----------------------TCHHHHHHTTCCHHHHHHTCEEEEEEE
T ss_pred -----CCCCcChhhHh----------------------hHHHhhhhhHHHHHHHHHHhCCCCEEE
Confidence 12579999962 122222444456678999999999877
No 235
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.49 E-value=1.7e-06 Score=92.20 Aligned_cols=113 Identities=14% Similarity=0.118 Sum_probs=85.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEecCCCCCc-ccccc
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS-PCAIITNHDASVMP-NVLYT 253 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~-~ni~v~~~Da~~~p-~~~~~ 253 (646)
..+.+|||+|||+|..+..+++.. +...++++|+ +..++.+++++...+. .++.++.+|+.... .
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~--------p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---- 244 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN--------KEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVP---- 244 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS--------TTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCC----
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC--------CCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCC----
Confidence 456799999999999999999874 4678999999 9999999999888776 46999999987531 0
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCc
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNP 327 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p 327 (646)
.+..||.|++-- ++..|... ...++|+++.+.|||||+|+.....+..
T Consensus 245 ------~p~~~D~v~~~~-------------vlh~~~~~-------~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 245 ------FPTGFDAVWMSQ-------------FLDCFSEE-------EVISILTRVAQSIGKDSKVYIMETLWDR 292 (363)
T ss_dssp ------CCCCCSEEEEES-------------CSTTSCHH-------HHHHHHHHHHHHCCTTCEEEEEECCTTS
T ss_pred ------CCCCcCEEEEec-------------hhhhCCHH-------HHHHHHHHHHHhcCCCcEEEEEeeccCC
Confidence 014699998631 12233322 2247899999999999999887655443
No 236
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.49 E-value=4e-07 Score=93.65 Aligned_cols=120 Identities=15% Similarity=0.117 Sum_probs=78.7
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEE--EEEcCCHHHHHHHHHHHHHc-CCCCeEEE--ecCCCCCcc
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLV--VANDVDNNRCYMLVHQAKRL-NSPCAIIT--NHDASVMPN 249 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~V--vA~Dis~~Rl~~L~~n~~rl-g~~ni~v~--~~Da~~~p~ 249 (646)
+.++.+|||+|||+|..|..++..+.... +...| +++|+|+..++.+++++... +..++.+. ..++..++.
T Consensus 50 ~~~~~~VLDiG~GtG~~~~~~l~~l~~~~----~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~ 125 (292)
T 2aot_A 50 TKSEIKILSIGGGAGEIDLQILSKVQAQY----PGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQS 125 (292)
T ss_dssp TCSEEEEEEETCTTSHHHHHHHHHHHHHS----TTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHH
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHhhC----CCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhh
Confidence 46788999999999998887766553211 24544 99999999999999888764 56676554 444433221
Q ss_pred ccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 250 VLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 250 ~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
... .+ .....||.|++-. ++..-+|. ...|.++.++|||||+|+.++.+
T Consensus 126 ~~~---~~-~~~~~fD~V~~~~------~l~~~~d~----------------~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 126 RML---EK-KELQKWDFIHMIQ------MLYYVKDI----------------PATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp HHH---TT-TCCCCEEEEEEES------CGGGCSCH----------------HHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hhc---cc-cCCCceeEEEEee------eeeecCCH----------------HHHHHHHHHHcCCCcEEEEEEec
Confidence 000 00 0125799999631 22222221 36799999999999999987544
No 237
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.48 E-value=2.9e-07 Score=92.99 Aligned_cols=97 Identities=15% Similarity=0.166 Sum_probs=75.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCC
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~ 255 (646)
.++.+|||+|||+|..+..+++.+ +.+.|+++|+++.+++.++++. .++.+...|+..++.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~--------~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~------ 144 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADAL--------PEITTFGLDVSKVAIKAAAKRY-----PQVTFCVASSHRLPF------ 144 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTC--------TTSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTSCSB------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhC--------CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcchhhCCC------
Confidence 678899999999999999998764 3568999999999998876653 567888888876542
Q ss_pred CCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
....||.|++... + ..+..+.++|||||+|+.++..
T Consensus 145 ----~~~~fD~v~~~~~----------~-------------------~~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 145 ----SDTSMDAIIRIYA----------P-------------------CKAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp ----CTTCEEEEEEESC----------C-------------------CCHHHHHHHEEEEEEEEEEEEC
T ss_pred ----CCCceeEEEEeCC----------h-------------------hhHHHHHHhcCCCcEEEEEEcC
Confidence 1247999996211 1 1367888999999999988654
No 238
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.48 E-value=7.6e-07 Score=91.19 Aligned_cols=142 Identities=11% Similarity=0.069 Sum_probs=86.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHc-----------------CC----
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRL-----------------NS---- 234 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rl-----------------g~---- 234 (646)
.++.+|||+|||+|. +..++... +...|+|+|+++..++.++++++.. +.
T Consensus 70 ~~~~~vLDiGcG~G~-~~~l~~~~--------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 140 (289)
T 2g72_A 70 VSGRTLIDIGSGPTV-YQLLSACS--------HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECW 140 (289)
T ss_dssp SCCSEEEEETCTTCC-GGGTTGGG--------GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCH
T ss_pred CCCCeEEEECCCcCh-HHHHhhcc--------CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccch
Confidence 367899999999999 44333221 2458999999999999888755421 10
Q ss_pred ---------CCeEEEecCCCC-CccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHH
Q psy17365 235 ---------PCAIITNHDASV-MPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRI 304 (646)
Q Consensus 235 ---------~ni~v~~~Da~~-~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~I 304 (646)
..+.++.+|+.. .|. . +.......||.|++-. ++.. +..-..-...+
T Consensus 141 ~~~~~~~~~~~~~~~~~D~~~~~~~-~----~~~~~~~~fD~V~~~~------~l~~------------~~~~~~~~~~~ 197 (289)
T 2g72_A 141 QDKERQLRARVKRVLPIDVHQPQPL-G----AGSPAPLPADALVSAF------CLEA------------VSPDLASFQRA 197 (289)
T ss_dssp HHHHHHHHHHEEEEECCCTTSSSTT-C----SSCSSCSSEEEEEEES------CHHH------------HCSSHHHHHHH
T ss_pred hhhHHHHHhhhceEEecccCCCCCc-c----ccccCCCCCCEEEehh------hhhh------------hcCCHHHHHHH
Confidence 013466678766 321 0 0011124699999731 1110 00001234578
Q ss_pred HHHHHHhhccCCeEEEEcCCC------------CccccHHHHHHHHHHccCcEEEeecc
Q psy17365 305 VKRGVEMLAVGGKIAYSTCSL------------NPLEDEAVIQRLIVETQGAVQLVDVS 351 (646)
Q Consensus 305 L~~A~~lLKpGG~LVYSTCSl------------~p~ENE~VV~~~L~~~~~~~elv~~~ 351 (646)
|.++.++|||||+|+.+...- ..--+++-+..+|++.+ |+++.+.
T Consensus 198 l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aG--f~~~~~~ 254 (289)
T 2g72_A 198 LDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSG--YKVRDLR 254 (289)
T ss_dssp HHHHHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTT--EEEEEEE
T ss_pred HHHHHHhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcC--CeEEEee
Confidence 999999999999999864210 01124566778888775 6666654
No 239
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.45 E-value=2.6e-07 Score=93.19 Aligned_cols=101 Identities=15% Similarity=0.093 Sum_probs=74.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
++.+|||+|||+|..+..+++. ...|+++|+++..++.++++.. .+ +...|+..++.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~----------~~~v~gvD~s~~~l~~a~~~~~----~~--~~~~d~~~~~~------- 110 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER----------GFEVVLVDPSKEMLEVAREKGV----KN--VVEAKAEDLPF------- 110 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT----------TCEEEEEESCHHHHHHHHHHTC----SC--EEECCTTSCCS-------
T ss_pred CCCeEEEeCCCcCHHHHHHHHc----------CCeEEEEeCCHHHHHHHHhhcC----CC--EEECcHHHCCC-------
Confidence 7889999999999999888754 3489999999999988877643 22 67788876541
Q ss_pred CCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 257 GNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 257 g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
....||.|++... +. .|.. -...+|.++.++|||||+|+.++.+
T Consensus 111 ---~~~~fD~v~~~~~------~~-------~~~~--------~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 111 ---PSGAFEAVLALGD------VL-------SYVE--------NKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp ---CTTCEEEEEECSS------HH-------HHCS--------CHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred ---CCCCEEEEEEcch------hh-------hccc--------cHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 1257999997422 10 0100 0347899999999999999988765
No 240
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.45 E-value=4.6e-07 Score=105.21 Aligned_cols=114 Identities=9% Similarity=0.075 Sum_probs=85.3
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHH------cCCCCeEEEecCCCC
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKR------LNSPCAIITNHDASV 246 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~r------lg~~ni~v~~~Da~~ 246 (646)
+...++.+|||+|||+|..+..|++... +.+.|+|+|+++..++.++++++. .+..++.+..+|+..
T Consensus 717 L~~~~g~rVLDVGCGTG~lai~LAr~g~-------p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~d 789 (950)
T 3htx_A 717 IRESSASTLVDFGCGSGSLLDSLLDYPT-------SLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILE 789 (950)
T ss_dssp HHHSCCSEEEEETCSSSHHHHHHTSSCC-------CCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTS
T ss_pred hcccCCCEEEEECCCCCHHHHHHHHhCC-------CCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHh
Confidence 3455889999999999999988876521 236999999999999999887653 366789999999988
Q ss_pred CccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 247 MPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 247 ~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
++. ....||.|++. +++..-++ .....++..+.++|||| .++.+|+.
T Consensus 790 Lp~----------~d~sFDlVV~~------eVLeHL~d--------------p~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 790 FDS----------RLHDVDIGTCL------EVIEHMEE--------------DQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp CCT----------TSCSCCEEEEE------SCGGGSCH--------------HHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred CCc----------ccCCeeEEEEe------CchhhCCh--------------HHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 653 12579999983 33332222 12236789999999998 88888754
No 241
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.43 E-value=2.7e-07 Score=94.45 Aligned_cols=126 Identities=10% Similarity=0.015 Sum_probs=87.1
Q ss_pred ccccccCCCCC--CeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcC--------C-CC
Q psy17365 168 IPPLLLDVQTH--HKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLN--------S-PC 236 (646)
Q Consensus 168 l~~~~Ld~~pg--~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg--------~-~n 236 (646)
....++.+++| .+|||++||.|.-|..+|.. .+.|+++|+++..+.++++++++.. + .+
T Consensus 77 ~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~----------g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~ 146 (258)
T 2oyr_A 77 AVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV----------GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQER 146 (258)
T ss_dssp HHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH----------TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHH
T ss_pred HHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc----------CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcC
Confidence 33445667778 99999999999999999986 2479999999999999998887542 3 46
Q ss_pred eEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCC
Q psy17365 237 AIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGG 316 (646)
Q Consensus 237 i~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG 316 (646)
+.++++|+..+.... ...||.|++|||..... . ...++..++.|++.+
T Consensus 147 i~~~~~D~~~~L~~~---------~~~fDvV~lDP~y~~~~------~-----------------saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 147 LQLIHASSLTALTDI---------TPRPQVVYLDPMFPHKQ------K-----------------SALVKKEMRVFQSLV 194 (258)
T ss_dssp EEEEESCHHHHSTTC---------SSCCSEEEECCCCCCCC------C----------------------HHHHHHHHHS
T ss_pred EEEEECCHHHHHHhC---------cccCCEEEEcCCCCCcc------c-----------------chHHHHHHHHHHHhh
Confidence 889999987653211 13699999999953311 0 023455566666644
Q ss_pred eEEEEcCCCCccccHHHHHHHHHHccC
Q psy17365 317 KIAYSTCSLNPLEDEAVIQRLIVETQG 343 (646)
Q Consensus 317 ~LVYSTCSl~p~ENE~VV~~~L~~~~~ 343 (646)
.| ..+.+++++.+++....
T Consensus 195 -----~~---~~~~~~ll~~a~~~a~~ 213 (258)
T 2oyr_A 195 -----GP---DLDADGLLEPARLLATK 213 (258)
T ss_dssp -----CC---CTTGGGGHHHHHHHCSS
T ss_pred -----cC---CccHHHHHHHHHHhcCC
Confidence 24 33566778888776543
No 242
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.41 E-value=1.1e-08 Score=103.20 Aligned_cols=122 Identities=10% Similarity=0.110 Sum_probs=83.4
Q ss_pred ccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCC
Q psy17365 168 IPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVM 247 (646)
Q Consensus 168 l~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~ 247 (646)
.....+++.++++|||+|||+|..|..+++. .+.|+|+|+|+..++.++++++ +..++.++++|+..+
T Consensus 20 ~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~----------~~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~~~ 87 (245)
T 1yub_A 20 QIIKQLNLKETDTVYEIGTGKGHLTTKLAKI----------SKQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDILQF 87 (245)
T ss_dssp HHHHHCCCCSSEEEEECSCCCSSCSHHHHHH----------SSEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCTTT
T ss_pred HHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh----------CCeEEEEECCHHHHHHHHHHhc--cCCceEEEECChhhc
Confidence 3344567788999999999999999999876 2689999999998888777665 356799999999876
Q ss_pred ccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHH----HHHHHhhccCCeEEEEc
Q psy17365 248 PNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIV----KRGVEMLAVGGKIAYST 322 (646)
Q Consensus 248 p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL----~~A~~lLKpGG~LVYST 322 (646)
+.. + ...| .|++++|+.....+-.+ +...+. .....+ ..|.++|+|||+|+..+
T Consensus 88 ~~~-----~----~~~f-~vv~n~Py~~~~~~~~~--~~~~~~---------~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 88 QFP-----N----KQRY-KIVGNIPYHLSTQIIKK--VVFESR---------ASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp TCC-----C----SSEE-EEEEECCSSSCHHHHHH--HHHHCC---------CEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred Ccc-----c----CCCc-EEEEeCCccccHHHHHH--HHhCCC---------CCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 420 0 1358 89999998764321000 000000 001123 55788999999876543
No 243
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.40 E-value=1.9e-06 Score=90.02 Aligned_cols=110 Identities=17% Similarity=0.151 Sum_probs=83.6
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEecCCCCCccccc
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS-PCAIITNHDASVMPNVLY 252 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~-~ni~v~~~Da~~~p~~~~ 252 (646)
+..+ .+|||+|||+|..+..+++.. +...++++|+ +..++.+++++...+. .++.+..+|+.. +.
T Consensus 165 ~~~~-~~vlDvG~G~G~~~~~l~~~~--------p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~--- 230 (334)
T 2ip2_A 165 DFRG-RSFVDVGGGSGELTKAILQAE--------PSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EV--- 230 (334)
T ss_dssp CCTT-CEEEEETCTTCHHHHHHHHHC--------TTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CC---
T ss_pred CCCC-CEEEEeCCCchHHHHHHHHHC--------CCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CC---
Confidence 4555 899999999999999998874 4668999999 9999999998877765 468999999865 20
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
+..||.|++.- ++..|... ...++|+++.+.|+|||+|+.....+
T Consensus 231 --------~~~~D~v~~~~-------------vl~~~~~~-------~~~~~l~~~~~~L~pgG~l~i~e~~~ 275 (334)
T 2ip2_A 231 --------PSNGDIYLLSR-------------IIGDLDEA-------ASLRLLGNCREAMAGDGRVVVIERTI 275 (334)
T ss_dssp --------CSSCSEEEEES-------------CGGGCCHH-------HHHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred --------CCCCCEEEEch-------------hccCCCHH-------HHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 14699999632 22234322 22578999999999999999876544
No 244
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.40 E-value=4.8e-06 Score=88.83 Aligned_cols=114 Identities=13% Similarity=0.070 Sum_probs=87.2
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEecCCCCCcccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS-PCAIITNHDASVMPNVL 251 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~-~ni~v~~~Da~~~p~~~ 251 (646)
++..++.+|||+|||+|..+..+++.. +...++++|+ +..++.+++++...++ .+|.+..+|+....
T Consensus 198 ~~~~~~~~vlDvG~G~G~~~~~l~~~~--------p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~--- 265 (369)
T 3gwz_A 198 YDFSGAATAVDIGGGRGSLMAAVLDAF--------PGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETI--- 265 (369)
T ss_dssp SCCTTCSEEEEETCTTSHHHHHHHHHC--------TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCC---
T ss_pred CCCccCcEEEEeCCCccHHHHHHHHHC--------CCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCC---
Confidence 456778999999999999999998874 4678999999 9999999999988886 56999999986210
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCc
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNP 327 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p 327 (646)
+..||.|++-- ++..|... ...++|+++.+.|+|||+|+.....+..
T Consensus 266 ---------p~~~D~v~~~~-------------vlh~~~d~-------~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 266 ---------PDGADVYLIKH-------------VLHDWDDD-------DVVRILRRIATAMKPDSRLLVIDNLIDE 312 (369)
T ss_dssp ---------CSSCSEEEEES-------------CGGGSCHH-------HHHHHHHHHHTTCCTTCEEEEEEEBCCS
T ss_pred ---------CCCceEEEhhh-------------hhccCCHH-------HHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 12699998732 12233221 2347999999999999999987655543
No 245
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.40 E-value=9.1e-07 Score=86.10 Aligned_cols=102 Identities=17% Similarity=0.116 Sum_probs=73.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCC
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~ 255 (646)
.++.+|||+|||+|..+..+++. + ..|+++|+++..++.++++. ..+...|+..+...
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~---------~-~~~~~~D~~~~~~~~~~~~~-------~~~~~~d~~~~~~~----- 88 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN---------G-TRVSGIEAFPEAAEQAKEKL-------DHVVLGDIETMDMP----- 88 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT---------T-CEEEEEESSHHHHHHHHTTS-------SEEEESCTTTCCCC-----
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc---------C-CeEEEEeCCHHHHHHHHHhC-------CcEEEcchhhcCCC-----
Confidence 67889999999999999888754 2 58999999999887776543 25677787653210
Q ss_pred CCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
.....||.|++.. ++...++. ..+|..+.++|+|||+++.++-.
T Consensus 89 ---~~~~~fD~v~~~~------~l~~~~~~----------------~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 89 ---YEEEQFDCVIFGD------VLEHLFDP----------------WAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp ---SCTTCEEEEEEES------CGGGSSCH----------------HHHHHHTGGGEEEEEEEEEEEEC
T ss_pred ---CCCCccCEEEECC------hhhhcCCH----------------HHHHHHHHHHcCCCCEEEEEeCC
Confidence 1125799999742 22222221 36899999999999999988643
No 246
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.39 E-value=1.5e-07 Score=108.90 Aligned_cols=182 Identities=13% Similarity=0.097 Sum_probs=105.5
Q ss_pred ccccEEEecccccccccc----cC--CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHH--H
Q psy17365 155 ATGHISRQEAVSMIPPLL----LD--VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYML--V 226 (646)
Q Consensus 155 ~~G~i~~Qd~~Sml~~~~----Ld--~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L--~ 226 (646)
..|.++--...+.+.+.+ +. ..++.+|||.|||+|+..+.++..+... ....++|+|+++..+.++ +
T Consensus 293 k~GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei-----~~~~IyGvEIDp~Al~LAK~R 367 (878)
T 3s1s_A 293 HEGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNV-----MPRQIWANDIETLFLELLSIR 367 (878)
T ss_dssp CCBSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTC-----CGGGEEEECSCGGGHHHHHHH
T ss_pred cCceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhccc-----CCCeEEEEECCHHHHHHHHHH
Confidence 346554444433333333 22 2468899999999999999988765310 245799999999998888 5
Q ss_pred HHHHH----cCCCCeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccC-ccccccC------Ccchhh
Q psy17365 227 HQAKR----LNSPCAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKN-PDIWTKW------TPSNGN 295 (646)
Q Consensus 227 ~n~~r----lg~~ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~-pd~~~~w------~~~~~~ 295 (646)
.|+.. .|..+..+...|...... .....||.|+++||.++....... .+...++ .+....
T Consensus 368 lNL~lN~LlhGi~~~~I~~dD~L~~~~---------~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~ 438 (878)
T 3s1s_A 368 LGLLFPQLVSSNNAPTITGEDVCSLNP---------EDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLF 438 (878)
T ss_dssp HHTTSTTTCBTTBCCEEECCCGGGCCG---------GGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCS
T ss_pred HHHHHhhhhcCCCcceEEecchhcccc---------cccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccc
Confidence 55443 233344555555443211 112579999999999764321110 0000000 001111
Q ss_pred hhHHHHHHHHHHHHHhhccCCeEEEEcCC-CC--ccccHHHHHHHHHHccCcEEEeec
Q psy17365 296 NLHGIQYRIVKRGVEMLAVGGKIAYSTCS-LN--PLEDEAVIQRLIVETQGAVQLVDV 350 (646)
Q Consensus 296 ~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS-l~--p~ENE~VV~~~L~~~~~~~elv~~ 350 (646)
....+...++.+|+++|++||++++.+-+ +. ....+.-+.+.|-+...-..+++.
T Consensus 439 G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~~~kkLRk~LLe~~~I~aIIdL 496 (878)
T 3s1s_A 439 GQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESKAFREFLVGNFGLEHIFLY 496 (878)
T ss_dssp SSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSHHHHHHHHHHTTTTCEEEEEEC
T ss_pred cccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCChHHHHHHHHHHhCCCeEEEEEC
Confidence 22345678999999999999999987544 22 122245566666544333345554
No 247
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.39 E-value=3.6e-07 Score=93.57 Aligned_cols=98 Identities=11% Similarity=-0.010 Sum_probs=76.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHH----cCCCCeEEEecCCCCCccccc
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKR----LNSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~r----lg~~ni~v~~~Da~~~p~~~~ 252 (646)
.+.+|||+|||.|+.+..++.. + +.|+++|+|+..++.+++++.. +.-+++.++.+|+..+.
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~---------~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---- 137 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY---------D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---- 137 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS---------S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC----
T ss_pred CCCEEEEEeCCcCHHHHHHHhC---------C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH----
Confidence 4579999999999988776542 4 6899999999999988876533 23467899999987653
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
..||.|++|++ +|. ..+..+.+.|+|||+||..+++
T Consensus 138 ---------~~fD~Ii~d~~---------dp~------------------~~~~~~~~~L~pgG~lv~~~~~ 173 (262)
T 2cmg_A 138 ---------KKYDLIFCLQE---------PDI------------------HRIDGLKRMLKEDGVFISVAKH 173 (262)
T ss_dssp ---------CCEEEEEESSC---------CCH------------------HHHHHHHTTEEEEEEEEEEEEC
T ss_pred ---------hhCCEEEECCC---------ChH------------------HHHHHHHHhcCCCcEEEEEcCC
Confidence 36999999953 221 1678889999999999987655
No 248
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.37 E-value=5.6e-07 Score=93.82 Aligned_cols=82 Identities=15% Similarity=0.115 Sum_probs=69.0
Q ss_pred ccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcc
Q psy17365 170 PLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPN 249 (646)
Q Consensus 170 ~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~ 249 (646)
+..+++.++++|||+|||+|..|..|++. .+.|+|+|+|+..+..+++++. +.+++.++++|+..++.
T Consensus 43 v~~l~~~~~~~VLEIG~G~G~lT~~La~~----------~~~V~aVEid~~li~~a~~~~~--~~~~v~vi~gD~l~~~~ 110 (295)
T 3gru_A 43 VESANLTKDDVVLEIGLGKGILTEELAKN----------AKKVYVIEIDKSLEPYANKLKE--LYNNIEIIWGDALKVDL 110 (295)
T ss_dssp HHHTTCCTTCEEEEECCTTSHHHHHHHHH----------SSEEEEEESCGGGHHHHHHHHH--HCSSEEEEESCTTTSCG
T ss_pred HHhcCCCCcCEEEEECCCchHHHHHHHhc----------CCEEEEEECCHHHHHHHHHHhc--cCCCeEEEECchhhCCc
Confidence 34567889999999999999999999986 3689999999999999999887 45789999999987642
Q ss_pred ccccCCCCCCCCCCCCeeecCCCC
Q psy17365 250 VLYTDADGNKVPMKFDRVLCDVPC 273 (646)
Q Consensus 250 ~~~~~~~g~~~~~~FD~IL~D~PC 273 (646)
. ...||+|+++.|.
T Consensus 111 ~----------~~~fD~Iv~NlPy 124 (295)
T 3gru_A 111 N----------KLDFNKVVANLPY 124 (295)
T ss_dssp G----------GSCCSEEEEECCG
T ss_pred c----------cCCccEEEEeCcc
Confidence 1 1359999999984
No 249
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.36 E-value=1.4e-07 Score=98.20 Aligned_cols=99 Identities=18% Similarity=0.115 Sum_probs=66.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEE-EecCCCCCccccccCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAII-TNHDASVMPNVLYTDA 255 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v-~~~Da~~~p~~~~~~~ 255 (646)
+|.+|||+|||+|+.|..+++. +.+.|+|+|+++..++...++ . +.+.. ...++..+.....
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~---------ga~~V~aVDvs~~mL~~a~r~----~-~rv~~~~~~ni~~l~~~~l--- 147 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN---------GAKLVYAVDVGTNQLVWKLRQ----D-DRVRSMEQYNFRYAEPVDF--- 147 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT---------TCSEEEEECSSSSCSCHHHHT----C-TTEEEECSCCGGGCCGGGC---
T ss_pred cccEEEecCCCccHHHHHHHhC---------CCCEEEEEECCHHHHHHHHHh----C-cccceecccCceecchhhC---
Confidence 5789999999999999988875 467999999999877653221 1 22222 1223333221000
Q ss_pred CCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
....||.|++|+..... ..+|..+.++|||||+||..
T Consensus 148 ----~~~~fD~v~~d~sf~sl-------------------------~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 148 ----TEGLPSFASIDVSFISL-------------------------NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp ----TTCCCSEEEECCSSSCG-------------------------GGTHHHHHHHSCTTCEEEEE
T ss_pred ----CCCCCCEEEEEeeHhhH-------------------------HHHHHHHHHHcCcCCEEEEE
Confidence 11249999999753211 25788999999999999975
No 250
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.34 E-value=1.8e-06 Score=90.87 Aligned_cols=116 Identities=14% Similarity=0.098 Sum_probs=87.5
Q ss_pred cCCCC-CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEecCCCCCccc
Q psy17365 173 LDVQT-HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CAIITNHDASVMPNV 250 (646)
Q Consensus 173 Ld~~p-g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni~v~~~Da~~~p~~ 250 (646)
++..+ +.+|||+|||+|..+..+++.. +...++++|+ +..+..+++++...+.. ++.+..+|+...+..
T Consensus 174 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~--------p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 244 (352)
T 3mcz_A 174 LGVFARARTVIDLAGGHGTYLAQVLRRH--------PQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNF 244 (352)
T ss_dssp CGGGTTCCEEEEETCTTCHHHHHHHHHC--------TTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGG
T ss_pred CCCcCCCCEEEEeCCCcCHHHHHHHHhC--------CCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCccc
Confidence 34556 8899999999999999999875 4678999999 88899999999888875 599999998764311
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCC
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLN 326 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~ 326 (646)
....||.|++-- ++..|... ....+|+++.+.|+|||+|+.....+.
T Consensus 245 ---------~~~~~D~v~~~~-------------vlh~~~~~-------~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (352)
T 3mcz_A 245 ---------EGGAADVVMLND-------------CLHYFDAR-------EAREVIGHAAGLVKPGGALLILTMTMN 291 (352)
T ss_dssp ---------TTCCEEEEEEES-------------CGGGSCHH-------HHHHHHHHHHHTEEEEEEEEEEEECCC
T ss_pred ---------CCCCccEEEEec-------------ccccCCHH-------HHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 124599999721 12233222 135789999999999999988765443
No 251
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.33 E-value=2.4e-06 Score=83.80 Aligned_cols=95 Identities=14% Similarity=0.157 Sum_probs=70.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
|+.+|||+|||+|..+..++ .. +++|+++..++.++++ ++.+...|+..++.
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~-----------~~---~~vD~s~~~~~~a~~~-------~~~~~~~d~~~~~~------- 98 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLK-----------IK---IGVEPSERMAEIARKR-------GVFVLKGTAENLPL------- 98 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHT-----------CC---EEEESCHHHHHHHHHT-------TCEEEECBTTBCCS-------
T ss_pred CCCcEEEeCCCCCHHHHHHH-----------HH---hccCCCHHHHHHHHhc-------CCEEEEcccccCCC-------
Confidence 37899999999999877653 12 9999999998887765 57788888876541
Q ss_pred CCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 257 GNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 257 g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
....||.|++.. ++...++ ...+|..+.++|+|||+|+.++..
T Consensus 99 ---~~~~fD~v~~~~------~l~~~~~----------------~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 99 ---KDESFDFALMVT------TICFVDD----------------PERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp ---CTTCEEEEEEES------CGGGSSC----------------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ---CCCCeeEEEEcc------hHhhccC----------------HHHHHHHHHHHcCCCcEEEEEEeC
Confidence 124799999752 2222122 136899999999999999988654
No 252
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.33 E-value=2e-07 Score=94.61 Aligned_cols=117 Identities=18% Similarity=0.154 Sum_probs=69.1
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCC-CcEEEEEcC--CHHHHHHHHHHHHHcCCCCeEEEec-CCCCCccc
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVP-SGLVVANDV--DNNRCYMLVHQAKRLNSPCAIITNH-DASVMPNV 250 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~-~G~VvA~Di--s~~Rl~~L~~n~~rlg~~ni~v~~~-Da~~~p~~ 250 (646)
++||++|||+||||||+|..+++..+.. . .|.|+|+|. .+-.. .-.|..-+.+..+ |...+.
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg-----~V~G~vig~D~~~~P~~~-------~~~Gv~~i~~~~G~Df~~~~-- 136 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQ-----EVRGYTKGGPGHEEPMLM-------QSYGWNIVTMKSGVDVFYKP-- 136 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEE-----EEEEECCCSTTSCCCCCC-------CSTTGGGEEEECSCCGGGSC--
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCC-----CceeEEEccccccCCCcc-------cCCCceEEEeeccCCccCCC--
Confidence 4789999999999999999988762210 2 478888883 22100 0012222234445 776532
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCC-eEEEEcCCCCccc
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGG-KIAYSTCSLNPLE 329 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG-~LVYSTCSl~p~E 329 (646)
..++|.||||.--+ +|. |..+....+ ..|.-|.+.|+||| .+| |-+....
T Consensus 137 ----------~~~~DvVLSDMAPn-SG~----------~~vD~~Rs~-----~aL~~A~~~Lk~gG~~Fv---vKVFqg~ 187 (269)
T 2px2_A 137 ----------SEISDTLLCDIGES-SPS----------AEIEEQRTL-----RILEMVSDWLSRGPKEFC---IKILCPY 187 (269)
T ss_dssp ----------CCCCSEEEECCCCC-CSC----------HHHHHHHHH-----HHHHHHHHHHTTCCSEEE---EEESCTT
T ss_pred ----------CCCCCEEEeCCCCC-CCc----------cHHHHHHHH-----HHHHHHHHHhhcCCcEEE---EEECCCC
Confidence 24799999995334 552 111111111 26788889999999 776 4444433
Q ss_pred cHHHH
Q psy17365 330 DEAVI 334 (646)
Q Consensus 330 NE~VV 334 (646)
.+++.
T Consensus 188 ~~~~~ 192 (269)
T 2px2_A 188 MPKVI 192 (269)
T ss_dssp SHHHH
T ss_pred chHHH
Confidence 34443
No 253
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.33 E-value=1.3e-07 Score=96.78 Aligned_cols=90 Identities=14% Similarity=0.065 Sum_probs=69.6
Q ss_pred ccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCH-------HHHHHHHHHHHHcCCCC-eEE
Q psy17365 168 IPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDN-------NRCYMLVHQAKRLNSPC-AII 239 (646)
Q Consensus 168 l~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~-------~Rl~~L~~n~~rlg~~n-i~v 239 (646)
+...++.+.++.+|||+|||+|..|..+|.. .+.|+|+|+++ ..++.+++|++..++.+ +.+
T Consensus 74 ~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~----------g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~ 143 (258)
T 2r6z_A 74 LIAKAVNHTAHPTVWDATAGLGRDSFVLASL----------GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINL 143 (258)
T ss_dssp HHHHHTTGGGCCCEEETTCTTCHHHHHHHHT----------TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEE
T ss_pred HHHHHhCcCCcCeEEEeeCccCHHHHHHHHh----------CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEE
Confidence 3334446778899999999999999999874 35899999999 99999999988888766 999
Q ss_pred EecCCCCCccccccCCCCCCCCCCCCeeecCCCC
Q psy17365 240 TNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPC 273 (646)
Q Consensus 240 ~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PC 273 (646)
+++|+..+..... + ....||.|++|||.
T Consensus 144 ~~~d~~~~l~~~~---~---~~~~fD~V~~dP~~ 171 (258)
T 2r6z_A 144 HFGNAAEQMPALV---K---TQGKPDIVYLDPMY 171 (258)
T ss_dssp EESCHHHHHHHHH---H---HHCCCSEEEECCCC
T ss_pred EECCHHHHHHhhh---c---cCCCccEEEECCCC
Confidence 9999876422110 0 00369999999984
No 254
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.33 E-value=1.3e-06 Score=88.20 Aligned_cols=82 Identities=12% Similarity=0.279 Sum_probs=65.3
Q ss_pred cccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccc
Q psy17365 171 LLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNV 250 (646)
Q Consensus 171 ~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~ 250 (646)
..+++.++++|||+|||+|..|..+++. .+.|+|+|+|+..+..++++++. .+++.++++|+..++..
T Consensus 24 ~~~~~~~~~~VLDiG~G~G~lt~~l~~~----------~~~v~~vD~~~~~~~~a~~~~~~--~~~v~~~~~D~~~~~~~ 91 (244)
T 1qam_A 24 TNIRLNEHDNIFEIGSGKGHFTLELVQR----------CNFVTAIEIDHKLCKTTENKLVD--HDNFQVLNKDILQFKFP 91 (244)
T ss_dssp TTCCCCTTCEEEEECCTTSHHHHHHHHH----------SSEEEEECSCHHHHHHHHHHTTT--CCSEEEECCCGGGCCCC
T ss_pred HhCCCCCCCEEEEEeCCchHHHHHHHHc----------CCeEEEEECCHHHHHHHHHhhcc--CCCeEEEEChHHhCCcc
Confidence 3456788999999999999999999876 36899999999999999988764 36899999999876421
Q ss_pred cccCCCCCCCCCCCCeeecCCCCC
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCT 274 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCS 274 (646)
+ ...| .|++++|..
T Consensus 92 -----~----~~~~-~vv~nlPy~ 105 (244)
T 1qam_A 92 -----K----NQSY-KIFGNIPYN 105 (244)
T ss_dssp -----S----SCCC-EEEEECCGG
T ss_pred -----c----CCCe-EEEEeCCcc
Confidence 0 1235 689999954
No 255
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.29 E-value=3.6e-06 Score=97.57 Aligned_cols=128 Identities=13% Similarity=0.063 Sum_probs=87.9
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCC-C-C--------------------------------CCCcEEEEEcC
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADS-N-P--------------------------------VPSGLVVANDV 217 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~-~-~--------------------------------~~~G~VvA~Di 217 (646)
+....++..|||.|||+|+..+.+|.+...... . + .+...|+|+|+
T Consensus 185 ~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Di 264 (703)
T 3v97_A 185 RSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDS 264 (703)
T ss_dssp HTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEES
T ss_pred hhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEEC
Confidence 346678999999999999999888876421000 0 0 02357999999
Q ss_pred CHHHHHHHHHHHHHcCCCC-eEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhh
Q psy17365 218 DNNRCYMLVHQAKRLNSPC-AIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNN 296 (646)
Q Consensus 218 s~~Rl~~L~~n~~rlg~~n-i~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~ 296 (646)
|+..++.++.|+++.|+.+ +.+.++|+..+.... ....||.|++|||.. .. +. ....
T Consensus 265 d~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~--------~~~~~d~Iv~NPPYG-~R-----------lg--~~~~ 322 (703)
T 3v97_A 265 DARVIQRARTNARLAGIGELITFEVKDVAQLTNPL--------PKGPYGTVLSNPPYG-ER-----------LD--SEPA 322 (703)
T ss_dssp CHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSC--------TTCCCCEEEECCCCC-C----------------CCHH
T ss_pred CHHHHHHHHHHHHHcCCCCceEEEECChhhCcccc--------ccCCCCEEEeCCCcc-cc-----------cc--chhH
Confidence 9999999999999999986 889999998753210 012699999999972 11 10 1112
Q ss_pred hHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 297 LHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 297 l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
+..+.. -|.+.++.+.+||+++.-|
T Consensus 323 l~~ly~-~l~~~lk~~~~g~~~~ilt 347 (703)
T 3v97_A 323 LIALHS-LLGRIMKNQFGGWNLSLFS 347 (703)
T ss_dssp HHHHHH-HHHHHHHHHCTTCEEEEEE
T ss_pred HHHHHH-HHHHHHHhhCCCCeEEEEe
Confidence 333333 3566677778999887654
No 256
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.27 E-value=6.2e-07 Score=92.76 Aligned_cols=133 Identities=11% Similarity=0.051 Sum_probs=76.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCC
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~ 255 (646)
++|.+|||+||||||+|..+++.+ +...|+++|+...-..... ..+.++ .++.....+...+ .
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~--------gv~sV~Gvdlg~~~~~~P~-~~~~~~-~~iv~~~~~~di~-~------ 142 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQK--------EVMSVKGYTLGIEGHEKPI-HMQTLG-WNIVKFKDKSNVF-T------ 142 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTST--------TEEEEEEECCCCTTSCCCC-CCCBTT-GGGEEEECSCCTT-T------
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhc--------CCceeeeEEeccccccccc-cccccC-CceEEeecCceee-e------
Confidence 489999999999999999988753 3557889998642100000 000001 1222222111111 0
Q ss_pred CCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccC-CeEEEEcCCCCc--cccHH
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVG-GKIAYSTCSLNP--LEDEA 332 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpG-G~LVYSTCSl~p--~ENE~ 332 (646)
.....+|.|++|.-.+ +|. ++ .. +..|..||.-|.++|+|| |.+| |.+.. .+...
T Consensus 143 ---l~~~~~DlVlsD~APn-sG~----~~---------~D--~~rs~~LL~~A~~~LkpG~G~FV---~KvF~~yG~~~~ 200 (300)
T 3eld_A 143 ---MPTEPSDTLLCDIGES-SSN----PL---------VE--RDRTMKVLENFERWKHVNTENFC---VKVLAPYHPDVI 200 (300)
T ss_dssp ---SCCCCCSEEEECCCCC-CSS----HH---------HH--HHHHHHHHHHHHHHCCTTCCEEE---EEESSTTSHHHH
T ss_pred ---cCCCCcCEEeecCcCC-CCC----HH---------HH--HHHHHHHHHHHHHHhcCCCCcEE---EEeccccCccHH
Confidence 1125799999998766 673 11 11 223445599999999999 9999 55555 44444
Q ss_pred HHHHHHHHccCcEEE
Q psy17365 333 VIQRLIVETQGAVQL 347 (646)
Q Consensus 333 VV~~~L~~~~~~~el 347 (646)
...+.|+.+-..+..
T Consensus 201 ~ll~~lk~~F~~V~~ 215 (300)
T 3eld_A 201 EKLERLQLRFGGGIV 215 (300)
T ss_dssp HHHHHHHHHHCCEEE
T ss_pred HHHHHHHHhCCcEEE
Confidence 444555554333444
No 257
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.26 E-value=1.5e-06 Score=84.61 Aligned_cols=113 Identities=15% Similarity=0.143 Sum_probs=80.4
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccccc
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYT 253 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~ 253 (646)
...++.+|||+|||+|..+..+ ...|+++|+++. ++.+..+|+..++.
T Consensus 64 ~~~~~~~vLDiG~G~G~~~~~l-------------~~~v~~~D~s~~---------------~~~~~~~d~~~~~~---- 111 (215)
T 2zfu_A 64 QRPASLVVADFGCGDCRLASSI-------------RNPVHCFDLASL---------------DPRVTVCDMAQVPL---- 111 (215)
T ss_dssp TSCTTSCEEEETCTTCHHHHHC-------------CSCEEEEESSCS---------------STTEEESCTTSCSC----
T ss_pred ccCCCCeEEEECCcCCHHHHHh-------------hccEEEEeCCCC---------------CceEEEeccccCCC----
Confidence 3467889999999999977654 247999999987 45677888876541
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHH
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAV 333 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~V 333 (646)
....||.|++... +. .++ ...+|..+.++|+|||+++.+++.. ...+...
T Consensus 112 ------~~~~fD~v~~~~~------l~-~~~----------------~~~~l~~~~~~L~~gG~l~i~~~~~-~~~~~~~ 161 (215)
T 2zfu_A 112 ------EDESVDVAVFCLS------LM-GTN----------------IRDFLEEANRVLKPGGLLKVAEVSS-RFEDVRT 161 (215)
T ss_dssp ------CTTCEEEEEEESC------CC-SSC----------------HHHHHHHHHHHEEEEEEEEEEECGG-GCSCHHH
T ss_pred ------CCCCEeEEEEehh------cc-ccC----------------HHHHHHHHHHhCCCCeEEEEEEcCC-CCCCHHH
Confidence 1247999997432 11 111 1468899999999999999886553 2236677
Q ss_pred HHHHHHHccCcEEEeec
Q psy17365 334 IQRLIVETQGAVQLVDV 350 (646)
Q Consensus 334 V~~~L~~~~~~~elv~~ 350 (646)
+..+|++.+ |+++..
T Consensus 162 ~~~~l~~~G--f~~~~~ 176 (215)
T 2zfu_A 162 FLRAVTKLG--FKIVSK 176 (215)
T ss_dssp HHHHHHHTT--EEEEEE
T ss_pred HHHHHHHCC--CEEEEE
Confidence 788888875 676654
No 258
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.25 E-value=2.4e-06 Score=87.38 Aligned_cols=138 Identities=14% Similarity=0.132 Sum_probs=89.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhc-C-CCCCC-----CcEEEEEcCCH---HHHH-----------HHHHHHHH--
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAA-D-SNPVP-----SGLVVANDVDN---NRCY-----------MLVHQAKR-- 231 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~-~-~~~~~-----~G~VvA~Dis~---~Rl~-----------~L~~n~~r-- 231 (646)
.+++.+|||+|.|.|--++.+++..... . . + ...++++|.++ ..+. .++.+++.
T Consensus 58 ~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~---p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~ 134 (257)
T 2qy6_A 58 PHPLFVVAESGFGTGLNFLTLWQAFDQFREAH---PQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWP 134 (257)
T ss_dssp SSSEEEEEESCCTTSHHHHHHHHHHHHHHHHC---TTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHhhhhhC---CCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcc
Confidence 3466799999999999998887765100 0 0 2 35899999887 3333 33444443
Q ss_pred ----------c--CCCCeEEEecCCCCC-ccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhH
Q psy17365 232 ----------L--NSPCAIITNHDASVM-PNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLH 298 (646)
Q Consensus 232 ----------l--g~~ni~v~~~Da~~~-p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~ 298 (646)
+ +..++.+..+|+... +.... .....||.|++|+- .-.++|++|..
T Consensus 135 ~~~~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~------~~~~~~D~iflD~f-----sp~~~p~lw~~---------- 193 (257)
T 2qy6_A 135 MPLPGCHRLLLDEGRVTLDLWFGDINELISQLDD------SLNQKVDAWFLDGF-----APAKNPDMWTQ---------- 193 (257)
T ss_dssp CSCSEEEEEEEC--CEEEEEEESCHHHHGGGSCG------GGTTCEEEEEECSS-----CTTTCGGGCCH----------
T ss_pred ccccchhheeccCCceEEEEEECcHHHHHhhccc------ccCCeEEEEEECCC-----CcccChhhcCH----------
Confidence 1 123577889998763 32110 00136999999971 11357887542
Q ss_pred HHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHHHHHHHHHccCcEEEee
Q psy17365 299 GIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAVIQRLIVETQGAVQLVD 349 (646)
Q Consensus 299 ~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~VV~~~L~~~~~~~elv~ 349 (646)
+++....++|+|||+|+.-|++ ..|...|...+ |++..
T Consensus 194 ----~~l~~l~~~L~pGG~l~tysaa-------~~vrr~L~~aG--F~v~~ 231 (257)
T 2qy6_A 194 ----NLFNAMARLARPGGTLATFTSA-------GFVRRGLQEAG--FTMQK 231 (257)
T ss_dssp ----HHHHHHHHHEEEEEEEEESCCB-------HHHHHHHHHHT--EEEEE
T ss_pred ----HHHHHHHHHcCCCcEEEEEeCC-------HHHHHHHHHCC--CEEEe
Confidence 6899999999999999832221 37788888765 66543
No 259
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.25 E-value=1.2e-06 Score=94.85 Aligned_cols=105 Identities=13% Similarity=0.078 Sum_probs=75.5
Q ss_pred CCCeEEEEcCC------CchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccc
Q psy17365 177 THHKVLDMCAA------PGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNV 250 (646)
Q Consensus 177 pg~~VLDmCAa------PGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~ 250 (646)
++.+|||+||| +|+.|+.++.... +.+.|+++|+++.+. ...+++.++.+|+..++..
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~f-------P~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~dlpf~ 279 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFF-------PRGQIYGLDIMDKSH---------VDELRIRTIQGDQNDAEFL 279 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHC-------TTCEEEEEESSCCGG---------GCBTTEEEEECCTTCHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhC-------CCCEEEEEECCHHHh---------hcCCCcEEEEecccccchh
Confidence 46799999999 7888888887653 578999999999852 2457899999999875432
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
... . .....||.|++|.- . + ..-+...|..+.++|||||+++.+...
T Consensus 280 ~~l-~---~~d~sFDlVisdgs-----H----------~--------~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 280 DRI-A---RRYGPFDIVIDDGS-----H----------I--------NAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp HHH-H---HHHCCEEEEEECSC-----C----------C--------HHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred hhh-h---cccCCccEEEECCc-----c----------c--------chhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 000 0 00147999998731 0 0 123457899999999999999987543
No 260
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.24 E-value=8.3e-07 Score=91.10 Aligned_cols=134 Identities=15% Similarity=0.163 Sum_probs=74.9
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
++++.+|||+|||||++|..+++.. +.+.|+|+|+..+-...... ....|. +++....++....
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~--------~~~~v~g~dVGvDl~~~pi~-~~~~g~-~ii~~~~~~dv~~------ 135 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQK--------EVSGVKGFTLGRDGHEKPMN-VQSLGW-NIITFKDKTDIHR------ 135 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTST--------TEEEEEEECCCCTTCCCCCC-CCBTTG-GGEEEECSCCTTT------
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhc--------CCCcceeEEEeccCcccccc-cCcCCC-CeEEEeccceehh------
Confidence 4678899999999999998887653 35567777776321000000 000111 4555555442211
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccC-CeEEEEcCCCCc--cccH
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVG-GKIAYSTCSLNP--LEDE 331 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpG-G~LVYSTCSl~p--~ENE 331 (646)
.....||.|++|.-=+ +|. .| .. +..+..+|+-|.++|+|| |.+|. .+.. .++.
T Consensus 136 ----l~~~~~DlVlsD~apn-sG~---------~~----~D--~~rs~~LL~~a~~~LkpG~G~FV~---KVf~pyg~~~ 192 (277)
T 3evf_A 136 ----LEPVKCDTLLCDIGES-SSS---------SV----TE--GERTVRVLDTVEKWLACGVDNFCV---KVLAPYMPDV 192 (277)
T ss_dssp ----SCCCCCSEEEECCCCC-CSC---------HH----HH--HHHHHHHHHHHHHHHTTCCSEEEE---EESCTTSHHH
T ss_pred ----cCCCCccEEEecCccC-cCc---------hH----HH--HHHHHHHHHHHHHHhCCCCCeEEE---EecCCCCccH
Confidence 1125799999996433 442 11 11 112334589999999999 99995 4333 4444
Q ss_pred HHHHHHHHHccCcEEE
Q psy17365 332 AVIQRLIVETQGAVQL 347 (646)
Q Consensus 332 ~VV~~~L~~~~~~~el 347 (646)
....+.|+++=..+..
T Consensus 193 ~~l~~~lk~~F~~V~~ 208 (277)
T 3evf_A 193 LEKLELLQRRFGGTVI 208 (277)
T ss_dssp HHHHHHHHHHHCCEEE
T ss_pred HHHHHHHHHhcCCEEE
Confidence 3444445544233444
No 261
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.23 E-value=5.4e-07 Score=92.61 Aligned_cols=134 Identities=13% Similarity=0.055 Sum_probs=75.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
++|+.+|||+||||||++..+++.. +...|+++|+.......... .+.++ .+++....++... .
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~--------gv~sV~GvdvG~d~~~~pi~-~~~~g-~~ii~~~~~~dv~-~----- 151 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLK--------NVKKVMAFTLGVQGHEKPIM-RTTLG-WNLIRFKDKTDVF-N----- 151 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTST--------TEEEEEEECCCCTTSCCCCC-CCBTT-GGGEEEECSCCGG-G-----
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhc--------CCCeeeeEEeccCccccccc-cccCC-CceEEeeCCcchh-h-----
Confidence 3688899999999999998877543 46678899987541000000 00011 1233332222111 0
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccC--CeEEEEcCCCCc--ccc
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVG--GKIAYSTCSLNP--LED 330 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpG--G~LVYSTCSl~p--~EN 330 (646)
....++|.||||.-=+ +|. . ... +..+..+|.-|.++|+|| |.+| |.+.. .++
T Consensus 152 ----l~~~~~DvVLSDmApn-sG~---------~----~~D--~~rs~~LL~~A~~~Lk~g~~G~Fv---~KvF~pyg~~ 208 (282)
T 3gcz_A 152 ----MEVIPGDTLLCDIGES-SPS---------I----AVE--EQRTLRVLNCAKQWLQEGNYTEFC---IKVLCPYTPL 208 (282)
T ss_dssp ----SCCCCCSEEEECCCCC-CSC---------H----HHH--HHHHHHHHHHHHHHHHHHCCCEEE---EEESCCCSHH
T ss_pred ----cCCCCcCEEEecCccC-CCC---------h----HHH--HHHHHHHHHHHHHHcCCCCCCcEE---EEEecCCCcc
Confidence 1125799999995433 442 0 011 123344599999999999 9999 56554 444
Q ss_pred HHHHHHHHHHccCcEEE
Q psy17365 331 EAVIQRLIVETQGAVQL 347 (646)
Q Consensus 331 E~VV~~~L~~~~~~~el 347 (646)
.....+.|+++=..+..
T Consensus 209 ~~~l~~~lk~~F~~V~~ 225 (282)
T 3gcz_A 209 IMEELSRLQLKHGGGLV 225 (282)
T ss_dssp HHHHHHHHHHHHCCEEE
T ss_pred HHHHHHHHHHhcCCEEE
Confidence 44444455554333443
No 262
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.20 E-value=1.3e-05 Score=82.31 Aligned_cols=118 Identities=14% Similarity=0.062 Sum_probs=78.8
Q ss_pred CCCeEEEEcCCC---chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccccc
Q psy17365 177 THHKVLDMCAAP---GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYT 253 (646)
Q Consensus 177 pg~~VLDmCAaP---GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~ 253 (646)
+..+|||+|||+ |..+..+++. . +.+.|+++|+|+..++.+++++.. ..++.++.+|+........
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~-~-------p~~~v~~vD~sp~~l~~Ar~~~~~--~~~v~~~~~D~~~~~~~~~- 145 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSV-N-------PDARVVYVDIDPMVLTHGRALLAK--DPNTAVFTADVRDPEYILN- 145 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHH-C-------TTCEEEEEESSHHHHHHHHHHHTT--CTTEEEEECCTTCHHHHHH-
T ss_pred CCCEEEEECCCCCCCChHHHHHHHh-C-------CCCEEEEEECChHHHHHHHHhcCC--CCCeEEEEeeCCCchhhhc-
Confidence 447999999999 9766544443 2 567999999999999998887743 3578999999876421100
Q ss_pred CCC--CCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 254 DAD--GNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 254 ~~~--g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
.+. +......||.|++- +++..-++- ....+|.++.+.|+|||+|+.++.+.
T Consensus 146 ~~~~~~~~d~~~~d~v~~~------~vlh~~~d~--------------~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 146 HPDVRRMIDFSRPAAIMLV------GMLHYLSPD--------------VVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp SHHHHHHCCTTSCCEEEET------TTGGGSCTT--------------THHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred cchhhccCCCCCCEEEEEe------chhhhCCcH--------------HHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 000 00011368988863 223222221 12478999999999999999987664
No 263
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.19 E-value=8.2e-07 Score=89.19 Aligned_cols=99 Identities=18% Similarity=0.120 Sum_probs=64.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEE-ecCCCCCccccccCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIIT-NHDASVMPNVLYTDA 255 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~-~~Da~~~p~~~~~~~ 255 (646)
+|.+|||+|||+|..|..+++. +.+.|+|+|+++..++.+.++..+ +... ..++.......
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~---------g~~~V~gvDis~~ml~~a~~~~~~-----~~~~~~~~~~~~~~~~---- 98 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN---------GAKLVYALDVGTNQLAWKIRSDER-----VVVMEQFNFRNAVLAD---- 98 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT---------TCSEEEEECSSCCCCCHHHHTCTT-----EEEECSCCGGGCCGGG----
T ss_pred CCCEEEEEccCCCHHHHHHHhc---------CCCEEEEEcCCHHHHHHHHHhCcc-----ccccccceEEEeCHhH----
Confidence 4679999999999999988865 345999999999988765443322 2111 11111111000
Q ss_pred CCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
.....||.+.+|+..+.. ..+|..+.++|||||+++..
T Consensus 99 ---~~~~~~d~~~~D~v~~~l-------------------------~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 99 ---FEQGRPSFTSIDVSFISL-------------------------DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp ---CCSCCCSEEEECCSSSCG-------------------------GGTHHHHHHHSCTTCEEEEE
T ss_pred ---cCcCCCCEEEEEEEhhhH-------------------------HHHHHHHHHhccCCCEEEEE
Confidence 001136777777664431 25789999999999999975
No 264
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.17 E-value=1.7e-06 Score=88.22 Aligned_cols=85 Identities=13% Similarity=0.160 Sum_probs=67.0
Q ss_pred ccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcc
Q psy17365 170 PLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPN 249 (646)
Q Consensus 170 ~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~ 249 (646)
+..+++.++++|||+|||+|..|..|++. .+.|+|+|+|+..+..+++++.. ..++.++++|+..++.
T Consensus 22 v~~~~~~~~~~VLEIG~G~G~lt~~La~~----------~~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~~~~ 89 (255)
T 3tqs_A 22 VSAIHPQKTDTLVEIGPGRGALTDYLLTE----------CDNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQFDF 89 (255)
T ss_dssp HHHHCCCTTCEEEEECCTTTTTHHHHTTT----------SSEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTTCCG
T ss_pred HHhcCCCCcCEEEEEcccccHHHHHHHHh----------CCEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHhCCH
Confidence 34567889999999999999999998764 36899999999999999998765 5689999999988642
Q ss_pred ccccCCCCCCCCCCCCeeecCCCC
Q psy17365 250 VLYTDADGNKVPMKFDRVLCDVPC 273 (646)
Q Consensus 250 ~~~~~~~g~~~~~~FD~IL~D~PC 273 (646)
... .....|| |+.++|.
T Consensus 90 ~~~------~~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 90 SSV------KTDKPLR-VVGNLPY 106 (255)
T ss_dssp GGS------CCSSCEE-EEEECCH
T ss_pred HHh------ccCCCeE-EEecCCc
Confidence 110 0013577 8999983
No 265
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.16 E-value=2.1e-06 Score=92.77 Aligned_cols=132 Identities=12% Similarity=0.063 Sum_probs=86.2
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeE--EEecCCCCCcc
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAI--ITNHDASVMPN 249 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~--v~~~Da~~~p~ 249 (646)
.+.+.++.+|||+|||+|..+..+++. ...|+++|+++..++.++++ +.+... +...++..++.
T Consensus 102 ~~~~~~~~~VLDiGcG~G~~~~~l~~~----------g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~ 167 (416)
T 4e2x_A 102 TELTGPDPFIVEIGCNDGIMLRTIQEA----------GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRR 167 (416)
T ss_dssp TTTCSSSCEEEEETCTTTTTHHHHHHT----------TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHH
T ss_pred HhCCCCCCEEEEecCCCCHHHHHHHHc----------CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhccc
Confidence 345678999999999999998888764 34899999999988776554 444321 11122222210
Q ss_pred ccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC----
Q psy17365 250 VLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL---- 325 (646)
Q Consensus 250 ~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl---- 325 (646)
....||.|++. +++.+-++ ...+|.++.++|||||+|+.++-..
T Consensus 168 ----------~~~~fD~I~~~------~vl~h~~d----------------~~~~l~~~~r~LkpgG~l~i~~~~~~~~~ 215 (416)
T 4e2x_A 168 ----------TEGPANVIYAA------NTLCHIPY----------------VQSVLEGVDALLAPDGVFVFEDPYLGDIV 215 (416)
T ss_dssp ----------HHCCEEEEEEE------SCGGGCTT----------------HHHHHHHHHHHEEEEEEEEEEEECHHHHH
T ss_pred ----------CCCCEEEEEEC------ChHHhcCC----------------HHHHHHHHHHHcCCCeEEEEEeCChHHhh
Confidence 12579999974 33333332 2478999999999999999875321
Q ss_pred -----C-------ccccHHHHHHHHHHccCcEEEeecc
Q psy17365 326 -----N-------PLEDEAVIQRLIVETQGAVQLVDVS 351 (646)
Q Consensus 326 -----~-------p~ENE~VV~~~L~~~~~~~elv~~~ 351 (646)
. ..-....+..+|++.+ |+++++.
T Consensus 216 ~~~~~~~~~~~~~~~~s~~~l~~ll~~aG--f~~~~~~ 251 (416)
T 4e2x_A 216 AKTSFDQIFDEHFFLFSATSVQGMAQRCG--FELVDVQ 251 (416)
T ss_dssp HHTCGGGCSTTCCEECCHHHHHHHHHHTT--EEEEEEE
T ss_pred hhcchhhhhhhhhhcCCHHHHHHHHHHcC--CEEEEEE
Confidence 0 1113456777777765 6666654
No 266
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.12 E-value=1.4e-05 Score=78.79 Aligned_cols=122 Identities=13% Similarity=0.031 Sum_probs=82.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC---CCeEEEecCCCCC------
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS---PCAIITNHDASVM------ 247 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~---~ni~v~~~Da~~~------ 247 (646)
+..+||++|+ |.-|+.+|++ +.|.|+++|.++++++.+++++++.|. .+|.+..+|+...
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~---------~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p 98 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAEL---------PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHP 98 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTS---------TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCB
T ss_pred CCCEEEEECc--hHHHHHHHHc---------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhccccc
Confidence 4569999997 5666666652 368999999999999999999999994 5788999997542
Q ss_pred ---------ccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeE
Q psy17365 248 ---------PNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKI 318 (646)
Q Consensus 248 ---------p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~L 318 (646)
+.... ..........||.|++|+. +. ...+..++.+|++||+|
T Consensus 99 ~~~~~~~~l~~~~~-~i~~~~~~~~fDlIfIDg~---------------k~------------~~~~~~~l~~l~~GG~I 150 (202)
T 3cvo_A 99 VSDAKWRSYPDYPL-AVWRTEGFRHPDVVLVDGR---------------FR------------VGCALATAFSITRPVTL 150 (202)
T ss_dssp SSSTTGGGTTHHHH-GGGGCTTCCCCSEEEECSS---------------SH------------HHHHHHHHHHCSSCEEE
T ss_pred ccchhhhhHHHHhh-hhhccccCCCCCEEEEeCC---------------Cc------------hhHHHHHHHhcCCCeEE
Confidence 11100 0000001257999999974 00 03355688999999999
Q ss_pred EEEcCCCCccccHHHHHHHHH
Q psy17365 319 AYSTCSLNPLEDEAVIQRLIV 339 (646)
Q Consensus 319 VYSTCSl~p~ENE~VV~~~L~ 339 (646)
|.=..+..+ ....|.+++.
T Consensus 151 v~DNv~~r~--~y~~v~~~~~ 169 (202)
T 3cvo_A 151 LFDDYSQRR--WQHQVEEFLG 169 (202)
T ss_dssp EETTGGGCS--SGGGGHHHHC
T ss_pred EEeCCcCCc--chHHHHHHHh
Confidence 864333333 3446666664
No 267
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.06 E-value=7.8e-06 Score=84.29 Aligned_cols=111 Identities=20% Similarity=0.242 Sum_probs=74.2
Q ss_pred CCCeEEEEcCCCch----HHHHHHHHhhhcCCCCCC-CcEEEEEcCCHHHHHHHHHHHH--------------Hc-----
Q psy17365 177 THHKVLDMCAAPGS----KTAQIIEMIHAADSNPVP-SGLVVANDVDNNRCYMLVHQAK--------------RL----- 232 (646)
Q Consensus 177 pg~~VLDmCAaPGg----KT~~lae~l~~~~~~~~~-~G~VvA~Dis~~Rl~~L~~n~~--------------rl----- 232 (646)
++.+|||+|||+|- .+..+++.++.. + ...|+|.|+|+..++.+++++- +.
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~-----~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~ 179 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMA-----PGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGT 179 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSC-----TTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECC
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccC-----CCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccc
Confidence 35689999999998 455556654210 1 3489999999999999988641 10
Q ss_pred ----C---C-----CCeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHH
Q psy17365 233 ----N---S-----PCAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGI 300 (646)
Q Consensus 233 ----g---~-----~ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~l 300 (646)
| + .+|.+..+|....+- .....||.|+|- | ++..+. ...
T Consensus 180 ~~~~~~~~v~~~lr~~V~F~~~dl~~~~~---------~~~~~fDlI~cr-----------n--vliyf~-------~~~ 230 (274)
T 1af7_A 180 GPHEGLVRVRQELANYVEFSSVNLLEKQY---------NVPGPFDAIFCR-----------N--VMIYFD-------KTT 230 (274)
T ss_dssp TTSCSEEEECHHHHTTEEEEECCTTCSSC---------CCCCCEEEEEEC-----------S--SGGGSC-------HHH
T ss_pred cCCCCceeechhhcccCeEEecccCCCCC---------CcCCCeeEEEEC-----------C--chHhCC-------HHH
Confidence 0 0 257788888765321 002479999981 1 111111 234
Q ss_pred HHHHHHHHHHhhccCCeEEEE
Q psy17365 301 QYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 301 Q~~IL~~A~~lLKpGG~LVYS 321 (646)
|.+++.+..+.|+|||.|+..
T Consensus 231 ~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 231 QEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp HHHHHHHHGGGEEEEEEEEEC
T ss_pred HHHHHHHHHHHhCCCcEEEEE
Confidence 789999999999999999863
No 268
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.03 E-value=3.7e-06 Score=89.96 Aligned_cols=76 Identities=14% Similarity=0.150 Sum_probs=56.8
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
+++|++|||+||||||+|.++++. .+.|+|+|..+-. .. ....++|.++.+|+..+..
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r----------g~~V~aVD~~~l~-----~~--l~~~~~V~~~~~d~~~~~~----- 266 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR----------NMWVYSVDNGPMA-----QS--LMDTGQVTWLREDGFKFRP----- 266 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT----------TCEEEEECSSCCC-----HH--HHTTTCEEEECSCTTTCCC-----
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC----------CCEEEEEEhhhcC-----hh--hccCCCeEEEeCccccccC-----
Confidence 679999999999999999998764 5799999976421 11 1245789999999876532
Q ss_pred CCCCCCCCCCCeeecCCCCCCCc
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDG 277 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G 277 (646)
....||.|+||.-|.-.+
T Consensus 267 -----~~~~~D~vvsDm~~~p~~ 284 (375)
T 4auk_A 267 -----TRSNISWMVCDMVEKPAK 284 (375)
T ss_dssp -----CSSCEEEEEECCSSCHHH
T ss_pred -----CCCCcCEEEEcCCCChHH
Confidence 124799999998654433
No 269
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.02 E-value=2e-05 Score=83.22 Aligned_cols=109 Identities=16% Similarity=0.123 Sum_probs=74.6
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEecCCCCCcccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS-PCAIITNHDASVMPNVL 251 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~-~ni~v~~~Da~~~p~~~ 251 (646)
++..++.+|||+|||+|..+..+++.. +...++++|++ ..+. ..++++.+. .++.+..+|+...
T Consensus 180 ~~~~~~~~vLDvG~G~G~~~~~l~~~~--------p~~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~~~---- 244 (348)
T 3lst_A 180 GDFPATGTVADVGGGRGGFLLTVLREH--------PGLQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFLRE---- 244 (348)
T ss_dssp SCCCSSEEEEEETCTTSHHHHHHHHHC--------TTEEEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTTTC----
T ss_pred CCccCCceEEEECCccCHHHHHHHHHC--------CCCEEEEecCH-HHhh--cccccccCCCCCeEEEecCCCCC----
Confidence 456788999999999999999999875 46788999993 3322 222222333 3588999998521
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
.+ .||.|++-- ++..|... ...++|+++.+.|||||+|+......
T Consensus 245 --------~p-~~D~v~~~~-------------vlh~~~d~-------~~~~~L~~~~~~LkpgG~l~i~e~~~ 289 (348)
T 3lst_A 245 --------VP-HADVHVLKR-------------ILHNWGDE-------DSVRILTNCRRVMPAHGRVLVIDAVV 289 (348)
T ss_dssp --------CC-CCSEEEEES-------------CGGGSCHH-------HHHHHHHHHHHTCCTTCEEEEEECCB
T ss_pred --------CC-CCcEEEEeh-------------hccCCCHH-------HHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 02 699998631 12223222 12478999999999999998876543
No 270
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.01 E-value=4.6e-06 Score=85.86 Aligned_cols=82 Identities=16% Similarity=0.053 Sum_probs=65.9
Q ss_pred cccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccc
Q psy17365 171 LLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNV 250 (646)
Q Consensus 171 ~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~ 250 (646)
..+++.++ +|||+|||+|..|..|++. .+.|+|+|+|+..+..+++++. ..++.++++|+..++..
T Consensus 41 ~~~~~~~~-~VLEIG~G~G~lt~~L~~~----------~~~V~avEid~~~~~~l~~~~~---~~~v~vi~~D~l~~~~~ 106 (271)
T 3fut_A 41 EAARPFTG-PVFEVGPGLGALTRALLEA----------GAEVTAIEKDLRLRPVLEETLS---GLPVRLVFQDALLYPWE 106 (271)
T ss_dssp HHHCCCCS-CEEEECCTTSHHHHHHHHT----------TCCEEEEESCGGGHHHHHHHTT---TSSEEEEESCGGGSCGG
T ss_pred HhcCCCCC-eEEEEeCchHHHHHHHHHc----------CCEEEEEECCHHHHHHHHHhcC---CCCEEEEECChhhCChh
Confidence 34577889 9999999999999999875 3589999999999999988765 25899999999876421
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCC
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTG 275 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG 275 (646)
. ...||.|+.+.|..-
T Consensus 107 ~---------~~~~~~iv~NlPy~i 122 (271)
T 3fut_A 107 E---------VPQGSLLVANLPYHI 122 (271)
T ss_dssp G---------SCTTEEEEEEECSSC
T ss_pred h---------ccCccEEEecCcccc
Confidence 1 125899999999543
No 271
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=97.96 E-value=4e-05 Score=81.38 Aligned_cols=114 Identities=12% Similarity=0.158 Sum_probs=83.1
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~ 252 (646)
.+..+..+|||+++|+|..+..+++.. |...++..|. +.-++.+++++...+..+|.++.+|+...+
T Consensus 175 ~~~~~~~~v~DvGgG~G~~~~~l~~~~--------p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~---- 241 (353)
T 4a6d_A 175 FDLSVFPLMCDLGGGAGALAKECMSLY--------PGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDP---- 241 (353)
T ss_dssp SCGGGCSEEEEETCTTSHHHHHHHHHC--------SSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSC----
T ss_pred cCcccCCeEEeeCCCCCHHHHHHHHhC--------CCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCC----
Confidence 456678899999999999999999874 5667888886 777777777766566788999999975432
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCc
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNP 327 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p 327 (646)
...+|.|++- .++..|...+. .+||+++.+.|+|||+|+....-+.+
T Consensus 242 --------~~~~D~~~~~-------------~vlh~~~d~~~-------~~iL~~~~~al~pgg~lli~e~~~~~ 288 (353)
T 4a6d_A 242 --------LPEADLYILA-------------RVLHDWADGKC-------SHLLERIYHTCKPGGGILVIESLLDE 288 (353)
T ss_dssp --------CCCCSEEEEE-------------SSGGGSCHHHH-------HHHHHHHHHHCCTTCEEEEEECCCCT
T ss_pred --------CCCceEEEee-------------eecccCCHHHH-------HHHHHHHHhhCCCCCEEEEEEeeeCC
Confidence 1347888761 23345544332 47899999999999999877655543
No 272
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.90 E-value=5.3e-06 Score=87.49 Aligned_cols=90 Identities=17% Similarity=0.175 Sum_probs=70.2
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccc
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~ 251 (646)
+|.++||..++|+|+|-||.|..|++.++ +.|.|+|+|.|+..++.++ ++.-.++.+++.+...+....
T Consensus 52 ~L~i~pggiyVD~TlG~GGHS~~iL~~lg-------~~GrVig~D~Dp~Al~~A~----rL~~~Rv~lv~~nF~~l~~~L 120 (347)
T 3tka_A 52 GLNIRPDGIYIDGTFGRGGHSRLILSQLG-------EEGRLLAIDRDPQAIAVAK----TIDDPRFSIIHGPFSALGEYV 120 (347)
T ss_dssp HTCCCTTCEEEESCCTTSHHHHHHHTTCC-------TTCEEEEEESCHHHHHHHT----TCCCTTEEEEESCGGGHHHHH
T ss_pred hhCCCCCCEEEEeCcCCCHHHHHHHHhCC-------CCCEEEEEECCHHHHHHHH----hhcCCcEEEEeCCHHHHHHHH
Confidence 36789999999999999999999998875 6899999999999988762 454467889999887765432
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCC
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGD 276 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~ 276 (646)
. ..|. ...+|.||.|-.||..
T Consensus 121 ~--~~g~--~~~vDgILfDLGVSS~ 141 (347)
T 3tka_A 121 A--ERDL--IGKIDGILLDLGVSSP 141 (347)
T ss_dssp H--HTTC--TTCEEEEEEECSCCHH
T ss_pred H--hcCC--CCcccEEEECCccCHH
Confidence 1 0111 1259999999998863
No 273
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.89 E-value=3.5e-05 Score=79.44 Aligned_cols=117 Identities=17% Similarity=0.098 Sum_probs=78.5
Q ss_pred CeEEEEcCCC--chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 179 HKVLDMCAAP--GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 179 ~~VLDmCAaP--GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
..|||++||. |+.+.++++... +...|+++|.|+..+...+.++...+..++.++..|+..+..+.. .+.
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~-------P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~-~~~ 151 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVA-------PESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILD-APE 151 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHC-------TTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHT-CHH
T ss_pred CEEEEeCCCCCcccHHHHHHHHHC-------CCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhc-ccc
Confidence 6899999997 566778887664 678999999999999988877654444468999999987532110 000
Q ss_pred CCCCCCCCC-----eeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCC
Q psy17365 257 GNKVPMKFD-----RVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSL 325 (646)
Q Consensus 257 g~~~~~~FD-----~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl 325 (646)
....|| .|++. +++..-++. .....+|.+..+.|+|||+|+.|+-+-
T Consensus 152 ---~~~~~D~~~p~av~~~------avLH~l~d~-------------~~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 152 ---LRDTLDLTRPVALTVI------AIVHFVLDE-------------DDAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp ---HHTTCCTTSCCEEEEE------SCGGGSCGG-------------GCHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred ---cccccCcCCcchHHhh------hhHhcCCch-------------hhHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 001233 34442 333333331 012478999999999999999987653
No 274
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.86 E-value=1.7e-05 Score=81.81 Aligned_cols=118 Identities=19% Similarity=0.249 Sum_probs=74.7
Q ss_pred CCCCCCeEEEEcC------CCchHHHHHHHHhhhcCCCCCCC-cEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCC
Q psy17365 174 DVQTHHKVLDMCA------APGSKTAQIIEMIHAADSNPVPS-GLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASV 246 (646)
Q Consensus 174 d~~pg~~VLDmCA------aPGgKT~~lae~l~~~~~~~~~~-G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~ 246 (646)
.+.-|++|||++| |||+ ..+ ..+. +. +.|||+|+.+-- ...+ .++.+|...
T Consensus 106 ~vp~gmrVLDLGA~s~kg~APGS--~VL-r~~~-------p~g~~VVavDL~~~~-----------sda~-~~IqGD~~~ 163 (344)
T 3r24_A 106 AVPYNMRVIHFGAGSDKGVAPGT--AVL-RQWL-------PTGTLLVDSDLNDFV-----------SDAD-STLIGDCAT 163 (344)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHH-HHHS-------CTTCEEEEEESSCCB-----------CSSS-EEEESCGGG
T ss_pred eecCCCEEEeCCCCCCCCCCCcH--HHH-HHhC-------CCCcEEEEeeCcccc-----------cCCC-eEEEccccc
Confidence 3556999999998 9999 233 3333 55 599999987621 1122 458888654
Q ss_pred CccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCC
Q psy17365 247 MPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLN 326 (646)
Q Consensus 247 ~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~ 326 (646)
+.. ..+||+||+|.-...+|. .+-+. .....|. ..+|.-|.+.|+|||.+| |-+.
T Consensus 164 ~~~-----------~~k~DLVISDMAPNtTG~--~D~d~------~Rs~~L~---ElALdfA~~~LkpGGsFv---VKVF 218 (344)
T 3r24_A 164 VHT-----------ANKWDLIISDMYDPRTKH--VTKEN------DSKEGFF---TYLCGFIKQKLALGGSIA---VKIT 218 (344)
T ss_dssp EEE-----------SSCEEEEEECCCCTTSCS--SCSCC------CCCCTHH---HHHHHHHHHHEEEEEEEE---EEEC
T ss_pred ccc-----------CCCCCEEEecCCCCcCCc--cccch------hHHHHHH---HHHHHHHHHhCcCCCEEE---EEEe
Confidence 211 257999999977777775 12111 0112233 356777889999999998 4545
Q ss_pred ccccHHHHHHHH
Q psy17365 327 PLEDEAVIQRLI 338 (646)
Q Consensus 327 p~ENE~VV~~~L 338 (646)
.-+.++.+.++.
T Consensus 219 QGsg~~~L~~lr 230 (344)
T 3r24_A 219 EHSWNADLYKLM 230 (344)
T ss_dssp SSSCCHHHHHHH
T ss_pred cCCCHHHHHHHH
Confidence 545444455444
No 275
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.85 E-value=1.1e-05 Score=81.89 Aligned_cols=82 Identities=17% Similarity=0.247 Sum_probs=63.8
Q ss_pred cccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccc
Q psy17365 171 LLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNV 250 (646)
Q Consensus 171 ~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~ 250 (646)
..+++.++++|||+|||+|..|..+++. +.+.|+|+|+|+..+..++++ +..++.++++|+..++..
T Consensus 25 ~~~~~~~~~~VLDiG~G~G~lt~~L~~~---------~~~~v~avEid~~~~~~~~~~----~~~~v~~i~~D~~~~~~~ 91 (249)
T 3ftd_A 25 EELNIEEGNTVVEVGGGTGNLTKVLLQH---------PLKKLYVIELDREMVENLKSI----GDERLEVINEDASKFPFC 91 (249)
T ss_dssp HHTTCCTTCEEEEEESCHHHHHHHHTTS---------CCSEEEEECCCHHHHHHHTTS----CCTTEEEECSCTTTCCGG
T ss_pred HhcCCCCcCEEEEEcCchHHHHHHHHHc---------CCCeEEEEECCHHHHHHHHhc----cCCCeEEEEcchhhCChh
Confidence 3467788999999999999999988754 357999999999999988876 456899999999876431
Q ss_pred cccCCCCCCCCCCCCeeecCCCCC
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCT 274 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCS 274 (646)
.. ...| .|+.++|..
T Consensus 92 ~~--------~~~~-~vv~NlPy~ 106 (249)
T 3ftd_A 92 SL--------GKEL-KVVGNLPYN 106 (249)
T ss_dssp GS--------CSSE-EEEEECCTT
T ss_pred Hc--------cCCc-EEEEECchh
Confidence 11 0123 899999953
No 276
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.85 E-value=1.9e-05 Score=81.51 Aligned_cols=88 Identities=13% Similarity=0.131 Sum_probs=65.4
Q ss_pred cccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCC-CcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcc
Q psy17365 171 LLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVP-SGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPN 249 (646)
Q Consensus 171 ~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~-~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~ 249 (646)
..+++.++++|||+|||+|..|..|++... . .+.|+|+|+|+..+..++++. ..++.++++|+..++.
T Consensus 36 ~~~~~~~~~~VLEIG~G~G~lt~~La~~~~-------~~~~~V~avDid~~~l~~a~~~~----~~~v~~i~~D~~~~~~ 104 (279)
T 3uzu_A 36 AAIRPERGERMVEIGPGLGALTGPVIARLA-------TPGSPLHAVELDRDLIGRLEQRF----GELLELHAGDALTFDF 104 (279)
T ss_dssp HHHCCCTTCEEEEECCTTSTTHHHHHHHHC-------BTTBCEEEEECCHHHHHHHHHHH----GGGEEEEESCGGGCCG
T ss_pred HhcCCCCcCEEEEEccccHHHHHHHHHhCC-------CcCCeEEEEECCHHHHHHHHHhc----CCCcEEEECChhcCCh
Confidence 456788999999999999999999998742 1 266999999999999999883 4679999999987653
Q ss_pred ccccCCCCCCCCCCCCeeecCCCC
Q psy17365 250 VLYTDADGNKVPMKFDRVLCDVPC 273 (646)
Q Consensus 250 ~~~~~~~g~~~~~~FD~IL~D~PC 273 (646)
..... .+ ....++|+.+.|.
T Consensus 105 ~~~~~-~~---~~~~~~vv~NlPY 124 (279)
T 3uzu_A 105 GSIAR-PG---DEPSLRIIGNLPY 124 (279)
T ss_dssp GGGSC-SS---SSCCEEEEEECCH
T ss_pred hHhcc-cc---cCCceEEEEccCc
Confidence 11100 00 0124578888883
No 277
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.83 E-value=8.6e-06 Score=84.01 Aligned_cols=85 Identities=20% Similarity=0.209 Sum_probs=68.2
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccc
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~ 251 (646)
.|+++||..+||+++|.||.|..|++. .|.|+|+|.|+..++.+++ ++. .++.+++.+...+....
T Consensus 17 ~L~~~~gg~~VD~T~G~GGHS~~il~~----------~g~VigiD~Dp~Ai~~A~~-L~~---~rv~lv~~~f~~l~~~L 82 (285)
T 1wg8_A 17 LLAVRPGGVYVDATLGGAGHARGILER----------GGRVIGLDQDPEAVARAKG-LHL---PGLTVVQGNFRHLKRHL 82 (285)
T ss_dssp HHTCCTTCEEEETTCTTSHHHHHHHHT----------TCEEEEEESCHHHHHHHHH-TCC---TTEEEEESCGGGHHHHH
T ss_pred hhCCCCCCEEEEeCCCCcHHHHHHHHC----------CCEEEEEeCCHHHHHHHHh-hcc---CCEEEEECCcchHHHHH
Confidence 467899999999999999999999875 4799999999999988876 543 57999999998875432
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCC
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTG 275 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG 275 (646)
. ..| ...||.||+|...|.
T Consensus 83 ~--~~g---~~~vDgIL~DLGvSS 101 (285)
T 1wg8_A 83 A--ALG---VERVDGILADLGVSS 101 (285)
T ss_dssp H--HTT---CSCEEEEEEECSCCH
T ss_pred H--HcC---CCCcCEEEeCCcccc
Confidence 1 011 146999999998887
No 278
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=97.80 E-value=9e-05 Score=75.02 Aligned_cols=100 Identities=14% Similarity=-0.041 Sum_probs=74.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCC
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~ 255 (646)
.+..+|||++||.|-.+..++ +...++|.|+|+..++.+++++.++| .+..+...|...-+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~-----------~~~~y~a~DId~~~i~~ar~~~~~~g-~~~~~~v~D~~~~~------- 164 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER-----------GIASVWGCDIHQGLGDVITPFAREKD-WDFTFALQDVLCAP------- 164 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT-----------TCSEEEEEESBHHHHHHHHHHHHHTT-CEEEEEECCTTTSC-------
T ss_pred CCCCeEEEecCCccHHHHHhc-----------cCCeEEEEeCCHHHHHHHHHHHHhcC-CCceEEEeecccCC-------
Confidence 456799999999998877654 26799999999999999999999988 45677777875432
Q ss_pred CCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEE
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIA 319 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LV 319 (646)
....||.||+- .-+.-|...|...+.+.++.|+++|.+|
T Consensus 165 ----~~~~~DvvLll---------------------k~lh~LE~q~~~~~~~ll~aL~~~~vvV 203 (253)
T 3frh_A 165 ----PAEAGDLALIF---------------------KLLPLLEREQAGSAMALLQSLNTPRMAV 203 (253)
T ss_dssp ----CCCBCSEEEEE---------------------SCHHHHHHHSTTHHHHHHHHCBCSEEEE
T ss_pred ----CCCCcchHHHH---------------------HHHHHhhhhchhhHHHHHHHhcCCCEEE
Confidence 12579999752 1123344445555668888999987666
No 279
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.78 E-value=2.8e-05 Score=77.96 Aligned_cols=127 Identities=17% Similarity=0.170 Sum_probs=76.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEec-CCCCCcccccc
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNH-DASVMPNVLYT 253 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~-Da~~~p~~~~~ 253 (646)
++|+..|||++|||||+|..++... +...|+|+|+-..-.+. -..++.+|...|.+..+ |...++
T Consensus 76 l~~g~~VvDLGaapGGWSq~~a~~~--------g~~~V~avdvG~~ghe~-P~~~~s~gwn~v~fk~gvDv~~~~----- 141 (267)
T 3p8z_A 76 VIPEGRVIDLGCGRGGWSYYCAGLK--------KVTEVRGYTKGGPGHEE-PVPMSTYGWNIVKLMSGKDVFYLP----- 141 (267)
T ss_dssp SCCCEEEEEESCTTSHHHHHHHTST--------TEEEEEEECCCSTTSCC-CCCCCCTTTTSEEEECSCCGGGCC-----
T ss_pred CCCCCEEEEcCCCCCcHHHHHHHhc--------CCCEEEEEecCCCCccC-cchhhhcCcCceEEEeccceeecC-----
Confidence 4689999999999999998777653 35589999987542100 00012345566777777 764433
Q ss_pred CCCCCCCCCCCCeeecC-CCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHH
Q psy17365 254 DADGNKVPMKFDRVLCD-VPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEA 332 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D-~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~ 332 (646)
...+|.|||| +|.|+ +|.+ +.... .+.|+-|.+.|++ |.++ |-+..-+..+
T Consensus 142 -------~~~~DtllcDIgeSs~------~~~v------E~~Rt-----lrvLela~~wL~~-~~fc---~KVl~py~p~ 193 (267)
T 3p8z_A 142 -------PEKCDTLLCDIGESSP------SPTV------EESRT-----IRVLKMVEPWLKN-NQFC---IKVLNPYMPT 193 (267)
T ss_dssp -------CCCCSEEEECCCCCCS------CHHH------HHHHH-----HHHHHHHGGGCSS-CEEE---EEESCCCSHH
T ss_pred -------CccccEEEEecCCCCC------Chhh------hhhHH-----HHHHHHHHHhccc-CCEE---EEEccCCChh
Confidence 2469999999 44222 2221 11111 2367778889998 6554 5544444444
Q ss_pred HHH---HHHHHccC
Q psy17365 333 VIQ---RLIVETQG 343 (646)
Q Consensus 333 VV~---~~L~~~~~ 343 (646)
|++ .+=.++++
T Consensus 194 v~e~l~~lq~~fgg 207 (267)
T 3p8z_A 194 VIEHLERLQRKHGG 207 (267)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhCC
Confidence 542 22344554
No 280
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.70 E-value=3.6e-05 Score=78.71 Aligned_cols=101 Identities=14% Similarity=0.063 Sum_probs=74.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
-.+|||++||.|-.+..++... +...++|+|+|+..++.+.+|+.++|+. ..+...|...-+
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~--------p~a~y~a~DId~~~le~a~~~l~~~g~~-~~~~v~D~~~~~--------- 194 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLP--------AETVYIASDIDARLVGFVDEALTRLNVP-HRTNVADLLEDR--------- 194 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCC--------TTCEEEEEESBHHHHHHHHHHHHHTTCC-EEEEECCTTTSC---------
T ss_pred CceeeeeccCccHHHHHHHhhC--------CCCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEeeecccC---------
Confidence 5599999999999887765431 5789999999999999999999999987 566677754321
Q ss_pred CCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEE
Q psy17365 258 NKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIA 319 (646)
Q Consensus 258 ~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LV 319 (646)
....||+||+- .-+.-|...|+..+-+.++.|++||.+|
T Consensus 195 --p~~~~DvaL~l---------------------kti~~Le~q~kg~g~~ll~aL~~~~vvV 233 (281)
T 3lcv_B 195 --LDEPADVTLLL---------------------KTLPCLETQQRGSGWEVIDIVNSPNIVV 233 (281)
T ss_dssp --CCSCCSEEEET---------------------TCHHHHHHHSTTHHHHHHHHSSCSEEEE
T ss_pred --CCCCcchHHHH---------------------HHHHHhhhhhhHHHHHHHHHhCCCCEEE
Confidence 13679999862 1122333333434448899999988777
No 281
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.67 E-value=0.0001 Score=78.58 Aligned_cols=104 Identities=15% Similarity=0.159 Sum_probs=73.7
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
..++.+|||+|||+|..+..+++.. +...++++|+ +..++.++. .+++.++.+|+.. +.
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~--------p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~----- 259 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKY--------PSINAINFDL-PHVIQDAPA------FSGVEHLGGDMFD-GV----- 259 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC--------TTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-CC-----
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhC--------CCCEEEEEeh-HHHHHhhhh------cCCCEEEecCCCC-CC-----
Confidence 5677899999999999999999875 4678999999 665443321 2578999999764 21
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCC
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLN 326 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~ 326 (646)
+.. |.|++-- ++..|...+ ..++|+++.+.|||||+|+.....+.
T Consensus 260 ------p~~-D~v~~~~-------------vlh~~~~~~-------~~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 260 ------PKG-DAIFIKW-------------ICHDWSDEH-------CLKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp ------CCC-SEEEEES-------------CGGGBCHHH-------HHHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred ------CCC-CEEEEec-------------hhhcCCHHH-------HHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 112 8887631 222343221 24789999999999999998766543
No 282
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.62 E-value=0.00014 Score=77.57 Aligned_cols=104 Identities=19% Similarity=0.234 Sum_probs=73.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
..++.+|||+|||+|..+..+++.. +...++++|+ +..+..++. .+++.++.+|+.. +.
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~--------p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~D~~~-~~----- 257 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHY--------PTIKGVNFDL-PHVISEAPQ------FPGVTHVGGDMFK-EV----- 257 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC--------TTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-CC-----
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHC--------CCCeEEEecC-HHHHHhhhh------cCCeEEEeCCcCC-CC-----
Confidence 5678899999999999999999875 4668899999 655433321 3578999999865 21
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCC
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLN 326 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~ 326 (646)
+.. |.|++-- ++..|...+ -.++|+++.+.|||||+|+.....+.
T Consensus 258 ------p~~-D~v~~~~-------------vlh~~~d~~-------~~~~L~~~~~~L~pgG~l~i~e~~~~ 302 (364)
T 3p9c_A 258 ------PSG-DTILMKW-------------ILHDWSDQH-------CATLLKNCYDALPAHGKVVLVQCILP 302 (364)
T ss_dssp ------CCC-SEEEEES-------------CGGGSCHHH-------HHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred ------CCC-CEEEehH-------------HhccCCHHH-------HHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 112 8887521 223343322 24789999999999999988765543
No 283
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.61 E-value=0.00043 Score=71.97 Aligned_cols=115 Identities=15% Similarity=0.171 Sum_probs=81.5
Q ss_pred ccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHH-----cCCCCeEEEecCC
Q psy17365 170 PLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKR-----LNSPCAIITNHDA 244 (646)
Q Consensus 170 ~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~r-----lg~~ni~v~~~Da 244 (646)
++++.+.| .+||=+|.|-|+.+..++..- +...|+.+|+|+.-++..++-+.. +.-+++.++.+|+
T Consensus 77 ~l~~~p~p-k~VLIiGgGdG~~~revlk~~--------~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg 147 (294)
T 3o4f_A 77 PLLAHGHA-KHVLIIGGGDGAMLREVTRHK--------NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDG 147 (294)
T ss_dssp HHHHSSCC-CEEEEESCTTSHHHHHHHTCT--------TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCT
T ss_pred HHhhCCCC-CeEEEECCCchHHHHHHHHcC--------CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechH
Confidence 44444544 489999999999887776431 345899999999999988876543 2346799999999
Q ss_pred CCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEE
Q psy17365 245 SVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAY 320 (646)
Q Consensus 245 ~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVY 320 (646)
..+... ...+||+|++|.+- ..|. ...+ ...+.++.+.+.|+|||.+|.
T Consensus 148 ~~~l~~---------~~~~yDvIi~D~~d-p~~~---~~~L--------------~t~eFy~~~~~~L~p~Gv~v~ 196 (294)
T 3o4f_A 148 VNFVNQ---------TSQTFDVIISDCTD-PIGP---GESL--------------FTSAFYEGCKRCLNPGGIFVA 196 (294)
T ss_dssp TTTTSC---------SSCCEEEEEESCCC-CCCT---TCCS--------------SCCHHHHHHHHTEEEEEEEEE
T ss_pred HHHHhh---------ccccCCEEEEeCCC-cCCC---chhh--------------cCHHHHHHHHHHhCCCCEEEE
Confidence 887532 13579999999872 1121 0011 112567788899999999986
No 284
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.60 E-value=0.00012 Score=77.24 Aligned_cols=104 Identities=20% Similarity=0.189 Sum_probs=74.0
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccccc
Q psy17365 174 DVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYT 253 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~ 253 (646)
+..++.+|||+|||+|..+..+++.. +...++++|+ +..++.+++ .+++.+..+|+.. +.
T Consensus 185 ~~~~~~~vlDvG~G~G~~~~~l~~~~--------p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~---- 244 (352)
T 1fp2_A 185 VFDGLESIVDVGGGTGTTAKIICETF--------PKLKCIVFDR-PQVVENLSG------SNNLTYVGGDMFT-SI---- 244 (352)
T ss_dssp HHTTCSEEEEETCTTSHHHHHHHHHC--------TTCEEEEEEC-HHHHTTCCC------BTTEEEEECCTTT-CC----
T ss_pred ccccCceEEEeCCCccHHHHHHHHHC--------CCCeEEEeeC-HHHHhhccc------CCCcEEEeccccC-CC----
Confidence 34577899999999999999999874 4668999999 776554432 2568888888754 10
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhcc---CCeEEEEcCCC
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAV---GGKIAYSTCSL 325 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKp---GG~LVYSTCSl 325 (646)
..||.|++-- ++..|... ...++|+++.+.||| ||+|+.+....
T Consensus 245 --------p~~D~v~~~~-------------~lh~~~d~-------~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 245 --------PNADAVLLKY-------------ILHNWTDK-------DCLRILKKCKEAVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp --------CCCSEEEEES-------------CGGGSCHH-------HHHHHHHHHHHHHSGGGCCCEEEEEECEE
T ss_pred --------CCccEEEeeh-------------hhccCCHH-------HHHHHHHHHHHhCCCCCCCcEEEEEEeec
Confidence 1399998731 12223221 124789999999999 99998776544
No 285
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.59 E-value=2.2e-05 Score=79.83 Aligned_cols=87 Identities=14% Similarity=0.043 Sum_probs=62.8
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccc
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~ 251 (646)
.+++.+|++|||+|||+|..|. ++ .. ..+.|+|+|+|+..+..+++++... +++.++++|+..++...
T Consensus 16 ~~~~~~~~~VLEIG~G~G~lt~-l~-~~--------~~~~v~avEid~~~~~~a~~~~~~~--~~v~~i~~D~~~~~~~~ 83 (252)
T 1qyr_A 16 AINPQKGQAMVEIGPGLAALTE-PV-GE--------RLDQLTVIELDRDLAARLQTHPFLG--PKLTIYQQDAMTFNFGE 83 (252)
T ss_dssp HHCCCTTCCEEEECCTTTTTHH-HH-HT--------TCSCEEEECCCHHHHHHHHTCTTTG--GGEEEECSCGGGCCHHH
T ss_pred hcCCCCcCEEEEECCCCcHHHH-hh-hC--------CCCeEEEEECCHHHHHHHHHHhccC--CceEEEECchhhCCHHH
Confidence 4577899999999999999999 53 31 2334999999999999998876542 58999999998764211
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCC
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTG 275 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG 275 (646)
. .+ .....|.|+.+.|..-
T Consensus 84 ~--~~---~~~~~~~vvsNlPY~i 102 (252)
T 1qyr_A 84 L--AE---KMGQPLRVFGNLPYNI 102 (252)
T ss_dssp H--HH---HHTSCEEEEEECCTTT
T ss_pred h--hc---ccCCceEEEECCCCCc
Confidence 0 00 0013579999999643
No 286
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.58 E-value=9.1e-05 Score=78.83 Aligned_cols=102 Identities=12% Similarity=0.075 Sum_probs=73.0
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
..++.+|||+|||+|..+..+++.. +...++++|+ +..+..+++ .+++.++.+|+.. +.
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~--------~~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~----- 265 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKY--------PLIKGINFDL-PQVIENAPP------LSGIEHVGGDMFA-SV----- 265 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC--------TTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-CC-----
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHC--------CCCeEEEeCh-HHHHHhhhh------cCCCEEEeCCccc-CC-----
Confidence 5678899999999999999999874 4678999999 766544332 3578899999865 21
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS 324 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS 324 (646)
..||.|++-- ++..|... ....+|+++.+.|||||+|+.+...
T Consensus 266 -------~~~D~v~~~~-------------~lh~~~d~-------~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 266 -------PQGDAMILKA-------------VCHNWSDE-------KCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp -------CCEEEEEEES-------------SGGGSCHH-------HHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred -------CCCCEEEEec-------------ccccCCHH-------HHHHHHHHHHHhcCCCCEEEEEEec
Confidence 1289998731 11223221 1247899999999999999977543
No 287
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.53 E-value=0.00028 Score=74.56 Aligned_cols=103 Identities=18% Similarity=0.188 Sum_probs=72.5
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
..++.+|||+|||+|..+..+++.. +...++++|+ +..++.+++ .+++.++.+|+.. +.
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~--------p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~----- 249 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIF--------PHLKCTVFDQ-PQVVGNLTG------NENLNFVGGDMFK-SI----- 249 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHC--------TTSEEEEEEC-HHHHSSCCC------CSSEEEEECCTTT-CC-----
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHC--------CCCeEEEecc-HHHHhhccc------CCCcEEEeCccCC-CC-----
Confidence 4567899999999999999999875 4668999998 555433221 3568888888764 21
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhcc---CCeEEEEcCCC
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAV---GGKIAYSTCSL 325 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKp---GG~LVYSTCSl 325 (646)
..||.|++-- ++..|... ...++|+++.+.|+| ||+|+.....+
T Consensus 250 -------~~~D~v~~~~-------------vlh~~~d~-------~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 250 -------PSADAVLLKW-------------VLHDWNDE-------QSLKILKNSKEAISHKGKDGKVIIIDISI 296 (358)
T ss_dssp -------CCCSEEEEES-------------CGGGSCHH-------HHHHHHHHHHHHTGGGGGGCEEEEEECEE
T ss_pred -------CCceEEEEcc-------------cccCCCHH-------HHHHHHHHHHHhCCCCCCCcEEEEEEecc
Confidence 1499999732 12223221 124789999999999 99998765543
No 288
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=97.45 E-value=0.00012 Score=82.61 Aligned_cols=75 Identities=16% Similarity=0.089 Sum_probs=61.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
.+-+|||+|||.|..|..||.+ ...|+++|.++..++.++..+...|..+|.+.++++..+....
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~----------ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~----- 130 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK----------GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAAL----- 130 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT----------TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHC-----
T ss_pred CCCeEEEECCCCcHHHHHHHhC----------CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhc-----
Confidence 4569999999999999999875 3589999999999999999988888778999999987653211
Q ss_pred CCCCCCCCCeeec
Q psy17365 257 GNKVPMKFDRVLC 269 (646)
Q Consensus 257 g~~~~~~FD~IL~ 269 (646)
....||+|+|
T Consensus 131 ---~~~~fD~v~~ 140 (569)
T 4azs_A 131 ---EEGEFDLAIG 140 (569)
T ss_dssp ---CTTSCSEEEE
T ss_pred ---cCCCccEEEE
Confidence 1257999996
No 289
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.44 E-value=0.00025 Score=73.24 Aligned_cols=127 Identities=15% Similarity=0.166 Sum_probs=74.9
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHH--HHHHHHHHcCCCCeEEEec-CCCCCcccc
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCY--MLVHQAKRLNSPCAIITNH-DASVMPNVL 251 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~--~L~~n~~rlg~~ni~v~~~-Da~~~p~~~ 251 (646)
++++..|||++|||||+|..++... +...|+|+|+-..-.+ ++ ++.++...|.+... |+..++.
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~--------gv~~V~avdvG~~~he~P~~---~~ql~w~lV~~~~~~Dv~~l~~-- 158 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQK--------RVQEVRGYTKGGPGHEEPQL---VQSYGWNIVTMKSGVDVFYRPS-- 158 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCT--------TEEEEEEECCCSTTSCCCCC---CCBTTGGGEEEECSCCTTSSCC--
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhc--------CCCEEEEEEcCCCCccCcch---hhhcCCcceEEEeccCHhhCCC--
Confidence 3688899999999999998777653 3458999998764110 00 01223333555555 6544432
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccC-CeEEEEcCC-CCc--
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVG-GKIAYSTCS-LNP-- 327 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpG-G~LVYSTCS-l~p-- 327 (646)
..+|.|+||.- -.+| +|.+ +.... .+.|+-|.+.|++| |.++ |- |.|
T Consensus 159 ----------~~~D~ivcDig-eSs~----~~~v------e~~Rt-----l~vLel~~~wL~~~~~~f~---~KVl~pY~ 209 (321)
T 3lkz_A 159 ----------ECCDTLLCDIG-ESSS----SAEV------EEHRT-----IRVLEMVEDWLHRGPREFC---VKVLCPYM 209 (321)
T ss_dssp ----------CCCSEEEECCC-CCCS----CHHH------HHHHH-----HHHHHHHHHHHTTCCCEEE---EEESCTTS
T ss_pred ----------CCCCEEEEECc-cCCC----Chhh------hhhHH-----HHHHHHHHHHhccCCCcEE---EEEcCCCC
Confidence 46999999975 3333 2221 11111 23677788899988 7655 44 444
Q ss_pred cccHHHHHHHHHHccC
Q psy17365 328 LEDEAVIQRLIVETQG 343 (646)
Q Consensus 328 ~ENE~VV~~~L~~~~~ 343 (646)
.|-.+-+..+-.++++
T Consensus 210 ~~v~e~l~~lq~~fgg 225 (321)
T 3lkz_A 210 PKVIEKMELLQRRYGG 225 (321)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHHHhCC
Confidence 3333344444456665
No 290
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.36 E-value=0.0029 Score=67.92 Aligned_cols=87 Identities=17% Similarity=0.256 Sum_probs=61.0
Q ss_pred CeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCCC
Q psy17365 179 HKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADGN 258 (646)
Q Consensus 179 ~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g~ 258 (646)
.+|||+|||.||.+.-+.++ +--.|+|+|+++..++.++.| .++..++++|...+........ .
T Consensus 3 ~~vidLFsG~GGlslG~~~a---------G~~~v~avE~d~~a~~t~~~N-----~~~~~~~~~DI~~~~~~~~~~~--~ 66 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA---------GFDVKMAVEIDQHAINTHAIN-----FPRSLHVQEDVSLLNAEIIKGF--F 66 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH---------TCEEEEEECSCHHHHHHHHHH-----CTTSEEECCCGGGCCHHHHHHH--H
T ss_pred CeEEEEccCcCHHHHHHHHC---------CCcEEEEEeCCHHHHHHHHHh-----CCCCceEecChhhcCHHHHHhh--c
Confidence 47999999999999887655 344688999999999998877 3456778889877632110000 0
Q ss_pred CCCCCCCeeecCCCCCCCccccc
Q psy17365 259 KVPMKFDRVLCDVPCTGDGTMRK 281 (646)
Q Consensus 259 ~~~~~FD~IL~D~PCSG~G~lrk 281 (646)
.....+|.|+.++||.+.-...+
T Consensus 67 ~~~~~~D~i~ggpPCQ~fS~ag~ 89 (376)
T 3g7u_A 67 KNDMPIDGIIGGPPCQGFSSIGK 89 (376)
T ss_dssp CSCCCCCEEEECCCCCTTC----
T ss_pred ccCCCeeEEEecCCCCCcccccC
Confidence 01246999999999998876543
No 291
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.35 E-value=0.0018 Score=68.20 Aligned_cols=79 Identities=14% Similarity=0.101 Sum_probs=60.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
+.+|||+|||.||.+..+..+ +--.|+|+|+++..++.+++|..... ++|...+....
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a---------G~~~v~~~e~d~~a~~t~~~N~~~~~-------~~Di~~~~~~~------ 68 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC---------GAECVYSNEWDKYAQEVYEMNFGEKP-------EGDITQVNEKT------ 68 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT---------TCEEEEEECCCHHHHHHHHHHHSCCC-------BSCGGGSCGGG------
T ss_pred CCcEEEECCCcCHHHHHHHHC---------CCeEEEEEeCCHHHHHHHHHHcCCCC-------cCCHHHcCHhh------
Confidence 568999999999999887653 34579999999999999999864321 57776653211
Q ss_pred CCCCCCCCeeecCCCCCCCccccc
Q psy17365 258 NKVPMKFDRVLCDVPCTGDGTMRK 281 (646)
Q Consensus 258 ~~~~~~FD~IL~D~PCSG~G~lrk 281 (646)
...+|.|+.++||.+.-...+
T Consensus 69 ---~~~~D~l~~gpPCQ~fS~ag~ 89 (327)
T 2c7p_A 69 ---IPDHDILCAGFPCQAFSISGK 89 (327)
T ss_dssp ---SCCCSEEEEECCCTTTCTTSC
T ss_pred ---CCCCCEEEECCCCCCcchhcc
Confidence 135999999999999876554
No 292
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.32 E-value=0.00027 Score=81.02 Aligned_cols=133 Identities=9% Similarity=0.047 Sum_probs=86.7
Q ss_pred CeEEEEcCCCchHHHHHHHHhhh-c----CCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC-eEEEecCCCCCccccc
Q psy17365 179 HKVLDMCAAPGSKTAQIIEMIHA-A----DSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC-AIITNHDASVMPNVLY 252 (646)
Q Consensus 179 ~~VLDmCAaPGgKT~~lae~l~~-~----~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n-i~v~~~Da~~~p~~~~ 252 (646)
..|||+|||.|-.+..++.+... . .........|+|+|.++.....++.... .|..+ |.++.+|++.+.....
T Consensus 411 ~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 411 VVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHHH
T ss_pred cEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhcccccc
Confidence 47999999999997654443220 0 0000013499999999987766666554 66655 8999999987631000
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC--CCcccc
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS--LNPLED 330 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS--l~p~EN 330 (646)
.+ ..++.|+|++.-- |.+ .+..+..+.|..+-++|||||.++=+.|+ +.|.+.
T Consensus 490 --~~---~~ekVDIIVSElm----Gsf----------------l~nEL~pe~Ld~v~r~Lkp~Gi~iP~~~t~ylaPi~~ 544 (745)
T 3ua3_A 490 --DR---GFEQPDIIVSELL----GSF----------------GDNELSPECLDGVTGFLKPTTISIPQKYTSYVKPIMS 544 (745)
T ss_dssp --HT---TCCCCSEEEECCC----BTT----------------BGGGSHHHHHHTTGGGSCTTCEEESCEEEEEEEEEEC
T ss_pred --cC---CCCcccEEEEecc----ccc----------------cchhccHHHHHHHHHhCCCCcEEECCccEEEEEEecC
Confidence 01 1368999998644 221 12233456788888999999999955555 778999
Q ss_pred HHHHHHH
Q psy17365 331 EAVIQRL 337 (646)
Q Consensus 331 E~VV~~~ 337 (646)
+..-.++
T Consensus 545 ~~l~~~v 551 (745)
T 3ua3_A 545 THIHQTI 551 (745)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8765543
No 293
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.32 E-value=0.00013 Score=68.72 Aligned_cols=113 Identities=8% Similarity=0.025 Sum_probs=71.8
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~ 252 (646)
+.+++|++|||+++|.. ++|+++..++.++++.. .++.+..+|+..++...
T Consensus 8 ~g~~~g~~vL~~~~g~v------------------------~vD~s~~ml~~a~~~~~----~~~~~~~~d~~~~~~~~- 58 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKSS------------------------PVEALKGLVDKLQALTG----NEGRVSVENIKQLLQSA- 58 (176)
T ss_dssp TTCCTTSEEEEEECTTS------------------------CHHHHHHHHHHHHHHTT----TTSEEEEEEGGGGGGGC-
T ss_pred cCCCCCCEEEEecCCce------------------------eeeCCHHHHHHHHHhcc----cCcEEEEechhcCcccc-
Confidence 56789999999998741 16788888877776542 24788888988765210
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccC-ccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCc----
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKN-PDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNP---- 327 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~-pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p---- 327 (646)
.....||.|++-.. +..- ++. ..+|.++.++|||||+++.++-....
T Consensus 59 ------~~~~~fD~V~~~~~------l~~~~~~~----------------~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~ 110 (176)
T 2ld4_A 59 ------HKESSFDIILSGLV------PGSTTLHS----------------AEILAEIARILRPGGCLFLKEPVETAVDNN 110 (176)
T ss_dssp ------CCSSCEEEEEECCS------TTCCCCCC----------------HHHHHHHHHHEEEEEEEEEEEEEESSSCSS
T ss_pred ------CCCCCEeEEEECCh------hhhcccCH----------------HHHHHHHHHHCCCCEEEEEEcccccccccc
Confidence 01257999997321 1111 111 36899999999999999985321110
Q ss_pred --cccHHHHHHHHHHcc
Q psy17365 328 --LEDEAVIQRLIVETQ 342 (646)
Q Consensus 328 --~ENE~VV~~~L~~~~ 342 (646)
....+-+...|++.+
T Consensus 111 ~~~~~~~~~~~~l~~aG 127 (176)
T 2ld4_A 111 SKVKTASKLCSALTLSG 127 (176)
T ss_dssp SSSCCHHHHHHHHHHTT
T ss_pred cccCCHHHHHHHHHHCC
Confidence 012445566677765
No 294
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.31 E-value=0.00045 Score=71.41 Aligned_cols=136 Identities=11% Similarity=0.041 Sum_probs=95.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCH--------------------------HHHHHHHHHHH
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDN--------------------------NRCYMLVHQAK 230 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~--------------------------~Rl~~L~~n~~ 230 (646)
|| .||+++++.|.-++.+|+.+.... .+.+.|+++|... .+++.+++|++
T Consensus 107 pg-~IlEiGv~~G~Sai~ma~~l~~~g---~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~ 182 (282)
T 2wk1_A 107 PG-DLVETGVWRGGACILMRGILRAHD---VRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFR 182 (282)
T ss_dssp CC-EEEEECCTTSHHHHHHHHHHHHTT---CCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHH
T ss_pred CC-cEEEeecCchHHHHHHHHHhHhcC---CCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHH
Confidence 44 899999999999999998874210 0267899999641 14677899999
Q ss_pred HcCC--CCeEEEecCCCCC-ccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHH
Q psy17365 231 RLNS--PCAIITNHDASVM-PNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKR 307 (646)
Q Consensus 231 rlg~--~ni~v~~~Da~~~-p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~ 307 (646)
+.|+ .+|.++.+|+... +.. ....||.|.+|+- ...-....|..
T Consensus 183 ~~gl~~~~I~li~Gda~etL~~~---------~~~~~d~vfIDaD------------------------~y~~~~~~Le~ 229 (282)
T 2wk1_A 183 NYDLLDEQVRFLPGWFKDTLPTA---------PIDTLAVLRMDGD------------------------LYESTWDTLTN 229 (282)
T ss_dssp HTTCCSTTEEEEESCHHHHSTTC---------CCCCEEEEEECCC------------------------SHHHHHHHHHH
T ss_pred HcCCCcCceEEEEeCHHHHHhhC---------CCCCEEEEEEcCC------------------------ccccHHHHHHH
Confidence 9997 6899999998652 221 1247999999962 01112367888
Q ss_pred HHHhhccCCeEEEEcCCCCccccHHHHHHHHHHccCcEEEeec
Q psy17365 308 GVEMLAVGGKIAYSTCSLNPLEDEAVIQRLIVETQGAVQLVDV 350 (646)
Q Consensus 308 A~~lLKpGG~LVYSTCSl~p~ENE~VV~~~L~~~~~~~elv~~ 350 (646)
++.+|+|||.||.--....+.+ ...|.+++++++-.+.+.++
T Consensus 230 ~~p~L~pGGiIv~DD~~~~~G~-~~Av~Ef~~~~~i~~~i~~~ 271 (282)
T 2wk1_A 230 LYPKVSVGGYVIVDDYMMCPPC-KDAVDEYRAKFDIADELITI 271 (282)
T ss_dssp HGGGEEEEEEEEESSCTTCHHH-HHHHHHHHHHTTCCSCCEEC
T ss_pred HHhhcCCCEEEEEcCCCCCHHH-HHHHHHHHHhcCCceEEEEe
Confidence 9999999999997555444554 45667778777644444443
No 295
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.31 E-value=0.00042 Score=79.12 Aligned_cols=122 Identities=13% Similarity=0.151 Sum_probs=82.9
Q ss_pred CeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC-eEEEecCCCCCccccccCCCC
Q psy17365 179 HKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC-AIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 179 ~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n-i~v~~~Da~~~p~~~~~~~~g 257 (646)
..|||+|||.|-.....+.+.... + -.-+|+|+|.++. +..+.+.++..|..+ |.|+++|++.+.
T Consensus 359 ~vVldVGaGrGpLv~~al~A~a~~-~---~~vkVyAVEknp~-A~~a~~~v~~N~~~dkVtVI~gd~eev~--------- 424 (637)
T 4gqb_A 359 QVLMVLGAGRGPLVNASLRAAKQA-D---RRIKLYAVEKNPN-AVVTLENWQFEEWGSQVTVVSSDMREWV--------- 424 (637)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHT-T---CEEEEEEEESCHH-HHHHHHHHHHHTTGGGEEEEESCTTTCC---------
T ss_pred cEEEEECCCCcHHHHHHHHHHHhc-C---CCcEEEEEECCHH-HHHHHHHHHhccCCCeEEEEeCcceecc---------
Confidence 469999999999855544443210 0 1337999999985 455666777888754 889999998752
Q ss_pred CCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCC--CCccccHHHHH
Q psy17365 258 NKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCS--LNPLEDEAVIQ 335 (646)
Q Consensus 258 ~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCS--l~p~ENE~VV~ 335 (646)
.++++|+|++..= |.+- ..++ -..+|..+-++|||||.++=+.|+ +.|.+.+..-.
T Consensus 425 --LPEKVDIIVSEwM----G~fL-------------l~E~---mlevL~Ardr~LKPgGimiPs~atlyiapi~~~~l~~ 482 (637)
T 4gqb_A 425 --APEKADIIVSELL----GSFA-------------DNEL---SPECLDGAQHFLKDDGVSIPGEYTSFLAPISSSKLYN 482 (637)
T ss_dssp --CSSCEEEEECCCC----BTTB-------------GGGC---HHHHHHHHGGGEEEEEEEESCEEEEEEEEEECHHHHH
T ss_pred --CCcccCEEEEEcC----cccc-------------cccC---CHHHHHHHHHhcCCCcEEccccceEEEEEecCHHHHH
Confidence 1368999998643 2110 1111 125778888999999999966666 56888876554
Q ss_pred H
Q psy17365 336 R 336 (646)
Q Consensus 336 ~ 336 (646)
+
T Consensus 483 e 483 (637)
T 4gqb_A 483 E 483 (637)
T ss_dssp H
T ss_pred H
Confidence 4
No 296
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.25 E-value=0.00043 Score=74.25 Aligned_cols=137 Identities=16% Similarity=0.192 Sum_probs=85.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHc-----C---CCCeEEEecCCCCCc
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRL-----N---SPCAIITNHDASVMP 248 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rl-----g---~~ni~v~~~Da~~~p 248 (646)
+..+||=+|.|-|+....++.. +...|+.+|+|+.-++..++-+..+ . .+++.++..|+..+.
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh---------~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl 275 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL---------KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVL 275 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT---------CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHhc---------CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHH
Confidence 4579999999999987776542 3468999999999988887653221 1 134788999997764
Q ss_pred cccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEE-EcCCCCc
Q psy17365 249 NVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAY-STCSLNP 327 (646)
Q Consensus 249 ~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVY-STCSl~p 327 (646)
.... ....+||+|++|++-...+. .|. .....-..++.+..+.+.|+|||.+|. +.|-..+
T Consensus 276 ~~~~------~~~~~yDvIIvDl~D~~~s~---~p~---------g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~ 337 (381)
T 3c6k_A 276 KRYA------KEGREFDYVINDLTAVPIST---SPE---------EDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLT 337 (381)
T ss_dssp HHHH------HHTCCEEEEEEECCSSCCCC---C-------------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCH
T ss_pred Hhhh------hccCceeEEEECCCCCcccC---ccc---------CcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcch
Confidence 3211 01247999999976211111 111 011123456788899999999999885 3443333
Q ss_pred cccHHHHHHHHHHc
Q psy17365 328 LEDEAVIQRLIVET 341 (646)
Q Consensus 328 ~ENE~VV~~~L~~~ 341 (646)
+.-..+.+.|++.
T Consensus 338 -~~~~~i~~tl~~v 350 (381)
T 3c6k_A 338 -EALSLYEEQLGRL 350 (381)
T ss_dssp -HHHHHHHHHHTTS
T ss_pred -hHHHHHHHHHHHh
Confidence 2223344444443
No 297
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.23 E-value=0.00042 Score=73.41 Aligned_cols=84 Identities=17% Similarity=0.214 Sum_probs=55.1
Q ss_pred CeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCCC
Q psy17365 179 HKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADGN 258 (646)
Q Consensus 179 ~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g~ 258 (646)
.+|||+|||.||.+..+..+-. .-..|+|+|+++..++..++|.. +..++++|...+.....
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~-------~~~~v~~~E~d~~a~~~~~~N~~-----~~~~~~~Di~~~~~~~~------ 64 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCI-------PAQVVAAIDVNTVANEVYKYNFP-----HTQLLAKTIEGITLEEF------ 64 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTC-------SEEEEEEECCCHHHHHHHHHHCT-----TSCEECSCGGGCCHHHH------
T ss_pred CeEEEeCcCccHHHHHHHHCCC-------CceEEEEEeCCHHHHHHHHHhcc-----ccccccCCHHHccHhHc------
Confidence 4799999999999988876410 02379999999999999988853 34567888877632111
Q ss_pred CCCCCCCeeecCCCCCCCccccc
Q psy17365 259 KVPMKFDRVLCDVPCTGDGTMRK 281 (646)
Q Consensus 259 ~~~~~FD~IL~D~PCSG~G~lrk 281 (646)
....+|.|+.++||.+..+..+
T Consensus 65 -~~~~~D~l~~gpPCq~fS~ag~ 86 (343)
T 1g55_A 65 -DRLSFDMILMSPPCQPFTRIGR 86 (343)
T ss_dssp -HHHCCSEEEECCC---------
T ss_pred -CcCCcCEEEEcCCCcchhhcCC
Confidence 0025999999999999876543
No 298
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.22 E-value=5.5e-05 Score=78.07 Aligned_cols=123 Identities=10% Similarity=0.054 Sum_probs=81.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
.+..|||++||+|+.+..++. +...++.+|.+++.++.|++|++. ..++.|.+.|+........
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS----------~~d~~vfvE~~~~a~~~L~~Nl~~--~~~~~V~~~D~~~~L~~l~---- 154 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLR----------SQDRLYLCELHPTEYNFLLKLPHF--NKKVYVNHTDGVSKLNALL---- 154 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSC----------TTSEEEEECCSHHHHHHHTTSCCT--TSCEEEECSCHHHHHHHHC----
T ss_pred cCCCceeEeCCcHHHHHHHcC----------CCCeEEEEeCCHHHHHHHHHHhCc--CCcEEEEeCcHHHHHHHhc----
Confidence 355799999999998886643 246899999999999999999875 4678999999765322111
Q ss_pred CCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHHHHH
Q psy17365 257 GNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAVIQR 336 (646)
Q Consensus 257 g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~VV~~ 336 (646)
....+||.|++|||.--.+. ...-.+.|..+ ..+.++|+++. ..|.-+...+..
T Consensus 155 --~~~~~fdLVfiDPPYe~k~~-------------------~~~vl~~L~~~-~~r~~~Gi~v~----WYPi~~~~~~~~ 208 (283)
T 2oo3_A 155 --PPPEKRGLIFIDPSYERKEE-------------------YKEIPYAIKNA-YSKFSTGLYCV----WYPVVNKAWTEQ 208 (283)
T ss_dssp --SCTTSCEEEEECCCCCSTTH-------------------HHHHHHHHHHH-HHHCTTSEEEE----EEEESSHHHHHH
T ss_pred --CCCCCccEEEECCCCCCCcH-------------------HHHHHHHHHHh-CccCCCeEEEE----EEeccchHHHHH
Confidence 11246999999999542111 00111223333 24667887763 356666666666
Q ss_pred HHHHc
Q psy17365 337 LIVET 341 (646)
Q Consensus 337 ~L~~~ 341 (646)
++++.
T Consensus 209 ~~~~l 213 (283)
T 2oo3_A 209 FLRKM 213 (283)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 299
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.69 E-value=0.0032 Score=65.40 Aligned_cols=86 Identities=13% Similarity=0.106 Sum_probs=61.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcE-EEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGL-VVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~-VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
+.+.+|||+|||.||.+..+..+ + -.-. |+|+|+++..++..+.|. ++..+.++|...+.....
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G-------~~~~~v~a~E~d~~a~~ty~~N~-----~~~~~~~~DI~~i~~~~i-- 78 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-G-------IQVDRYIASEVCEDSITVGMVRH-----QGKIMYVGDVRSVTQKHI-- 78 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-T-------BCEEEEEEECCCHHHHHHHHHHT-----TTCEEEECCGGGCCHHHH--
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-C-------CccceEEEEECCHHHHHHHHHhC-----CCCceeCCChHHccHHHh--
Confidence 45668999999999999876543 1 1112 799999999998887763 344677889887643211
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccc
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMR 280 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lr 280 (646)
.....+|+|+..+||.+.-...
T Consensus 79 ----~~~~~~Dll~ggpPCQ~fS~ag 100 (295)
T 2qrv_A 79 ----QEWGPFDLVIGGSPCNDLSIVN 100 (295)
T ss_dssp ----HHTCCCSEEEECCCCGGGBTTC
T ss_pred ----cccCCcCEEEecCCCccccccC
Confidence 0013699999999999876653
No 300
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.54 E-value=0.013 Score=60.79 Aligned_cols=79 Identities=11% Similarity=0.091 Sum_probs=59.3
Q ss_pred CeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCCC
Q psy17365 179 HKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADGN 258 (646)
Q Consensus 179 ~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g~ 258 (646)
.+|||++||.||.+.-+-++ +=-.|.|+|+++..++..++|. +. .++++|.+.+....
T Consensus 1 mkvidLFsG~GG~~~G~~~a---------G~~~v~a~e~d~~a~~ty~~N~-----~~-~~~~~DI~~i~~~~------- 58 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA---------GFRIICANEYDKSIWKTYESNH-----SA-KLIKGDISKISSDE------- 58 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT---------TCEEEEEEECCTTTHHHHHHHC-----CS-EEEESCGGGCCGGG-------
T ss_pred CeEEEeCcCccHHHHHHHHC---------CCEEEEEEeCCHHHHHHHHHHC-----CC-CcccCChhhCCHhh-------
Confidence 47999999999998876432 2336889999999999988873 22 56778887764321
Q ss_pred CCCCCCCeeecCCCCCCCccccc
Q psy17365 259 KVPMKFDRVLCDVPCTGDGTMRK 281 (646)
Q Consensus 259 ~~~~~FD~IL~D~PCSG~G~lrk 281 (646)
....|.|+.-+||.+.-+..+
T Consensus 59 --~~~~D~l~ggpPCQ~fS~ag~ 79 (331)
T 3ubt_Y 59 --FPKCDGIIGGPPSQSWSEGGS 79 (331)
T ss_dssp --SCCCSEEECCCCGGGTEETTE
T ss_pred --CCcccEEEecCCCCCcCCCCC
Confidence 246899999999998766543
No 301
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.38 E-value=0.013 Score=61.07 Aligned_cols=131 Identities=16% Similarity=0.168 Sum_probs=79.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCc--EEEEEcCCHHH--------HHHHHHH-HHHc---CCCC--eEEE
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSG--LVVANDVDNNR--------CYMLVHQ-AKRL---NSPC--AIIT 240 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G--~VvA~Dis~~R--------l~~L~~n-~~rl---g~~n--i~v~ 240 (646)
+.-+|||+|-|+|--++...+.+... + +.. ..+++|.++-+ ...+.+. ..+. ...+ +.+.
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~-~---~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~ 171 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEV-N---PKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVL 171 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHH-C---TTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEE
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHh-C---CCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEE
Confidence 33479999999998765444332111 1 333 35777753211 1111111 2222 1223 3456
Q ss_pred ecCCCCC-ccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEE
Q psy17365 241 NHDASVM-PNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIA 319 (646)
Q Consensus 241 ~~Da~~~-p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LV 319 (646)
.+|+... +.+. ...||.|++|+= | -++||++|.. +++....++++|||+|+
T Consensus 172 ~GDa~~~l~~l~---------~~~~Da~flDgF-s----P~kNPeLWs~--------------e~f~~l~~~~~pgg~la 223 (308)
T 3vyw_A 172 LGDARKRIKEVE---------NFKADAVFHDAF-S----PYKNPELWTL--------------DFLSLIKERIDEKGYWV 223 (308)
T ss_dssp ESCHHHHGGGCC---------SCCEEEEEECCS-C----TTTSGGGGSH--------------HHHHHHHTTEEEEEEEE
T ss_pred echHHHHHhhhc---------ccceeEEEeCCC-C----cccCcccCCH--------------HHHHHHHHHhCCCcEEE
Confidence 7887653 2211 136999999961 1 2689998763 78999999999999998
Q ss_pred EEcCCCCccccHHHHHHHHHHccCcEEEe
Q psy17365 320 YSTCSLNPLEDEAVIQRLIVETQGAVQLV 348 (646)
Q Consensus 320 YSTCSl~p~ENE~VV~~~L~~~~~~~elv 348 (646)
--||+ ..|.+.|...| |++.
T Consensus 224 TYtaa-------g~VRR~L~~aG--F~V~ 243 (308)
T 3vyw_A 224 SYSSS-------LSVRKSLLTLG--FKVG 243 (308)
T ss_dssp ESCCC-------HHHHHHHHHTT--CEEE
T ss_pred EEeCc-------HHHHHHHHHCC--CEEE
Confidence 33343 68999999987 5543
No 302
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.28 E-value=0.0076 Score=63.61 Aligned_cols=82 Identities=17% Similarity=0.237 Sum_probs=58.7
Q ss_pred eEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCCCC
Q psy17365 180 KVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADGNK 259 (646)
Q Consensus 180 ~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g~~ 259 (646)
+|+|+|||.||.+..+.++ + .+.-.|+|+|+++..++..++|. +...+.+.|...+.....
T Consensus 5 ~~idLFaG~GG~~~G~~~a-G------~~~~~v~a~e~d~~a~~ty~~N~-----~~~~~~~~DI~~~~~~~~------- 65 (333)
T 4h0n_A 5 KILELYSGIGGMHCAWKES-G------LDGEIVAAVDINTVANSVYKHNF-----PETNLLNRNIQQLTPQVI------- 65 (333)
T ss_dssp EEEEETCTTTHHHHHHHHH-T------CSEEEEEEECCCHHHHHHHHHHC-----TTSCEECCCGGGCCHHHH-------
T ss_pred EEEEECcCccHHHHHHHHc-C------CCceEEEEEeCCHHHHHHHHHhC-----CCCceeccccccCCHHHh-------
Confidence 7999999999999877654 1 01135889999999999888874 334466788776542211
Q ss_pred CCCCCCeeecCCCCCCCcccc
Q psy17365 260 VPMKFDRVLCDVPCTGDGTMR 280 (646)
Q Consensus 260 ~~~~FD~IL~D~PCSG~G~lr 280 (646)
....+|.|+..+||.+.-...
T Consensus 66 ~~~~~D~l~ggpPCQ~fS~ag 86 (333)
T 4h0n_A 66 KKWNVDTILMSPPCQPFTRNG 86 (333)
T ss_dssp HHTTCCEEEECCCCCCSEETT
T ss_pred ccCCCCEEEecCCCcchhhhh
Confidence 012599999999999876543
No 303
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.08 E-value=0.0098 Score=61.36 Aligned_cols=59 Identities=12% Similarity=0.023 Sum_probs=44.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCC
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDA 244 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da 244 (646)
.+|+.|||.+||+|..+..++.+ ...++++|+++..++.+++++++.....-..+.+|+
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~----------g~~~~g~e~~~~~~~~a~~r~~~~~~~~~~~~~~~~ 292 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW----------GRRALGVELVPRYAQLAKERFAREVPGFSLEVLDGA 292 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT----------TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEECC-
T ss_pred CCCCEEEECCCCCCHHHHHHHHc----------CCeEEEEeCCHHHHHHHHHHHHHhccccchhhCCcc
Confidence 68999999999999877766543 348999999999999999999876332223333443
No 304
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.87 E-value=0.0083 Score=63.17 Aligned_cols=79 Identities=8% Similarity=0.133 Sum_probs=56.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEE-EEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLV-VANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~V-vA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
..+|+|+|||.||.+..+.++ + .+.-.| +|+|+++..++..++|... . +.+.|...+.....
T Consensus 10 ~~~vidLFaG~GG~~~G~~~a-G------~~~~~v~~a~e~d~~a~~ty~~N~~~-----~-~~~~DI~~~~~~~i---- 72 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERS-S------ININATFIPFDINEIANKIYSKNFKE-----E-VQVKNLDSISIKQI---- 72 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHS-S------CCCCEEEEEECCCHHHHHHHHHHHCC-----C-CBCCCTTTCCHHHH----
T ss_pred CCEEEEECCChhHHHHHHHHc-C------CCceEEEEEEECCHHHHHHHHHHCCC-----C-cccCChhhcCHHHh----
Confidence 348999999999998876543 1 001256 7999999999999888531 1 45778776542211
Q ss_pred CCCCCCCCCeeecCCCCCCC
Q psy17365 257 GNKVPMKFDRVLCDVPCTGD 276 (646)
Q Consensus 257 g~~~~~~FD~IL~D~PCSG~ 276 (646)
....+|.|+..+||.+.
T Consensus 73 ---~~~~~Dil~ggpPCQ~f 89 (327)
T 3qv2_A 73 ---ESLNCNTWFMSPPCQPY 89 (327)
T ss_dssp ---HHTCCCEEEECCCCTTC
T ss_pred ---ccCCCCEEEecCCccCc
Confidence 01269999999999998
No 305
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.70 E-value=0.023 Score=61.46 Aligned_cols=69 Identities=20% Similarity=0.139 Sum_probs=55.0
Q ss_pred cccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHH---cCC-CCeEEEecCCC
Q psy17365 171 LLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKR---LNS-PCAIITNHDAS 245 (646)
Q Consensus 171 ~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~r---lg~-~ni~v~~~Da~ 245 (646)
.++.+++++.|+|++|.-|..|..++.... . +.+.|+|+|.++.-++.|++|++. .+. +++.+++.-+.
T Consensus 220 ~i~~l~~~~~viDvGAn~G~~s~~~a~~~~---~---~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~ 292 (409)
T 2py6_A 220 GLLRFSDSEKMVDCGASIGESLAGLIGVTK---G---KFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAG 292 (409)
T ss_dssp SSCCCCSSCEEEEETCTTSHHHHHHHHHHT---S---CCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEEC
T ss_pred cccccCCCCEEEECCCCcCHHHHHHHHHhc---C---CCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEE
Confidence 345678999999999999999998884332 0 248999999999999999999998 246 78877765443
No 306
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=95.52 E-value=0.02 Score=60.95 Aligned_cols=60 Identities=15% Similarity=0.063 Sum_probs=50.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVM 247 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~ 247 (646)
+++.|||++.|+|..|..|++... ...|+|+|+|..-+..|.+.. ...++.++++|+..+
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~--------~~~vvavE~D~~l~~~L~~~~---~~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYC--------PRQYSLLEKRSSLYKFLNAKF---EGSPLQILKRDPYDW 117 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHC--------CSEEEEECCCHHHHHHHHHHT---TTSSCEEECSCTTCH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCC--------CCEEEEEecCHHHHHHHHHhc---cCCCEEEEECCccch
Confidence 468999999999999999998642 458999999999888887765 246899999999654
No 307
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=95.51 E-value=0.014 Score=54.50 Aligned_cols=63 Identities=14% Similarity=0.035 Sum_probs=45.8
Q ss_pred CCCCeEEEEcCCCc-hHHHHHHHHhhhcCCCCCCCc-EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccccc
Q psy17365 176 QTHHKVLDMCAAPG-SKTAQIIEMIHAADSNPVPSG-LVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYT 253 (646)
Q Consensus 176 ~pg~~VLDmCAaPG-gKT~~lae~l~~~~~~~~~~G-~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~ 253 (646)
.++.+|||+|+|+| ..+..|++. .| .|+|+|+++..+. +++.|.... ....
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~----------~g~~V~atDInp~Av~---------------~v~dDiF~P-~~~~- 86 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKH----------SKVDLVLTDIKPSHGG---------------IVRDDITSP-RMEI- 86 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHH----------SCCEEEEECSSCSSTT---------------EECCCSSSC-CHHH-
T ss_pred CCCCcEEEEccCCChHHHHHHHHh----------CCCeEEEEECCccccc---------------eEEccCCCC-cccc-
Confidence 45679999999999 577777764 34 5999999997654 777787652 2110
Q ss_pred CCCCCCCCCCCCee-ecCCC
Q psy17365 254 DADGNKVPMKFDRV-LCDVP 272 (646)
Q Consensus 254 ~~~g~~~~~~FD~I-L~D~P 272 (646)
...||.| ...||
T Consensus 87 -------Y~~~DLIYsirPP 99 (153)
T 2k4m_A 87 -------YRGAALIYSIRPP 99 (153)
T ss_dssp -------HTTEEEEEEESCC
T ss_pred -------cCCcCEEEEcCCC
Confidence 1379999 88887
No 308
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.28 E-value=0.032 Score=58.08 Aligned_cols=100 Identities=20% Similarity=0.180 Sum_probs=65.6
Q ss_pred cCCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccc
Q psy17365 173 LDVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~ 251 (646)
..+++|++||-.+||+ |..++|+|..++ ..|++.|.+++|++.+ +++|...+ ++.+...+....
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G---------a~Vi~~~~~~~~~~~~----~~lGa~~~--i~~~~~~~~~~~ 226 (340)
T 3s2e_A 162 TDTRPGQWVVISGIGGLGHVAVQYARAMG---------LRVAAVDIDDAKLNLA----RRLGAEVA--VNARDTDPAAWL 226 (340)
T ss_dssp TTCCTTSEEEEECCSTTHHHHHHHHHHTT---------CEEEEEESCHHHHHHH----HHTTCSEE--EETTTSCHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC---------CeEEEEeCCHHHHHHH----HHcCCCEE--EeCCCcCHHHHH
Confidence 3678999999998876 777777777652 3899999999998865 45786533 332222211110
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
. . ....+|.|+.. +|.+ ..+..++++|++||++|..
T Consensus 227 ~-~-----~~g~~d~vid~---~g~~-------------------------~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 227 Q-K-----EIGGAHGVLVT---AVSP-------------------------KAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp H-H-----HHSSEEEEEES---SCCH-------------------------HHHHHHHHHEEEEEEEEEC
T ss_pred H-H-----hCCCCCEEEEe---CCCH-------------------------HHHHHHHHHhccCCEEEEe
Confidence 0 0 01258888753 3322 3578899999999999854
No 309
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.11 E-value=0.035 Score=58.33 Aligned_cols=101 Identities=21% Similarity=0.225 Sum_probs=64.0
Q ss_pred cCCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecC---CCCCc
Q psy17365 173 LDVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHD---ASVMP 248 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~D---a~~~p 248 (646)
.++++|++||-.+||+ |..++|+|..+ +...|++.|.++.|++.++ .+|...+ ++.+ ...+.
T Consensus 167 ~~~~~g~~VlV~GaG~vG~~aiqlak~~--------Ga~~Vi~~~~~~~~~~~a~----~lGa~~v--i~~~~~~~~~~~ 232 (356)
T 1pl8_A 167 GGVTLGHKVLVCGAGPIGMVTLLVAKAM--------GAAQVVVTDLSATRLSKAK----EIGADLV--LQISKESPQEIA 232 (356)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHT--------TCSEEEEEESCHHHHHHHH----HTTCSEE--EECSSCCHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc--------CCCEEEEECCCHHHHHHHH----HhCCCEE--EcCcccccchHH
Confidence 4689999999998765 55666676654 2448999999999987663 5787633 2222 11111
Q ss_pred c-ccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 249 N-VLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 249 ~-~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
. +.. .. ...||.|+- |+|.. ..+..++++|++||++|..
T Consensus 233 ~~i~~--~~----~~g~D~vid---~~g~~-------------------------~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 233 RKVEG--QL----GCKPEVTIE---CTGAE-------------------------ASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp HHHHH--HH----TSCCSEEEE---CSCCH-------------------------HHHHHHHHHSCTTCEEEEC
T ss_pred HHHHH--Hh----CCCCCEEEE---CCCCh-------------------------HHHHHHHHHhcCCCEEEEE
Confidence 0 000 00 135898874 33321 2467889999999999854
No 310
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.10 E-value=0.051 Score=57.57 Aligned_cols=105 Identities=16% Similarity=0.240 Sum_probs=65.4
Q ss_pred cCCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccc
Q psy17365 173 LDVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~ 251 (646)
..+++|++||=.+||+ |..++|+|..+ +...|+++|.+++|++.++ .+|...+ ++.....+....
T Consensus 178 ~~~~~g~~VlV~GaG~vG~~aiqlak~~--------Ga~~Vi~~~~~~~~~~~a~----~lGa~~v--i~~~~~~~~~~i 243 (370)
T 4ej6_A 178 SGIKAGSTVAILGGGVIGLLTVQLARLA--------GATTVILSTRQATKRRLAE----EVGATAT--VDPSAGDVVEAI 243 (370)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHT--------TCSEEEEECSCHHHHHHHH----HHTCSEE--ECTTSSCHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc--------CCCEEEEECCCHHHHHHHH----HcCCCEE--ECCCCcCHHHHH
Confidence 4689999999998765 55666666654 2458999999999987654 4687533 332222211100
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
. ...+ .....||.|+- |+|.+ ..+..++++|++||++|..
T Consensus 244 ~-~~~~-~~~gg~Dvvid---~~G~~-------------------------~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 244 A-GPVG-LVPGGVDVVIE---CAGVA-------------------------ETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp H-STTS-SSTTCEEEEEE---CSCCH-------------------------HHHHHHHHHEEEEEEEEEC
T ss_pred H-hhhh-ccCCCCCEEEE---CCCCH-------------------------HHHHHHHHHhccCCEEEEE
Confidence 0 0000 00126898774 45533 3578899999999999853
No 311
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.06 E-value=0.023 Score=57.31 Aligned_cols=50 Identities=12% Similarity=0.135 Sum_probs=38.9
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS 234 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~ 234 (646)
..+|+.|||.+||+|+.+..++. + ...++++|+++..++.++++++..++
T Consensus 210 ~~~~~~vlD~f~GsGtt~~~a~~-~---------gr~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 210 SNPNDLVLDCFMGSGTTAIVAKK-L---------GRNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHH-T---------TCEEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCCEEEECCCCCCHHHHHHHH-c---------CCeEEEEeCCHHHHHHHHHHHHhccC
Confidence 36899999999999986655443 2 34799999999999999999886653
No 312
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.01 E-value=0.028 Score=58.98 Aligned_cols=102 Identities=17% Similarity=0.240 Sum_probs=63.2
Q ss_pred cCCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccc
Q psy17365 173 LDVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~ 251 (646)
..+++|++||=.+||+ |..++|+|..+ +...|+++|.+++|++.++ ++|... +++.+...+....
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~~~--------Ga~~Vi~~~~~~~~~~~~~----~lGa~~--vi~~~~~~~~~~v 227 (352)
T 3fpc_A 162 ANIKLGDTVCVIGIGPVGLMSVAGANHL--------GAGRIFAVGSRKHCCDIAL----EYGATD--IINYKNGDIVEQI 227 (352)
T ss_dssp TTCCTTCCEEEECCSHHHHHHHHHHHTT--------TCSSEEEECCCHHHHHHHH----HHTCCE--EECGGGSCHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc--------CCcEEEEECCCHHHHHHHH----HhCCce--EEcCCCcCHHHHH
Confidence 4688999999998654 55555665543 2447999999999987664 468753 2332222221100
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEE
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAY 320 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVY 320 (646)
....+ ...||.|+ | |+|.. ..+..++++|++||++|.
T Consensus 228 ~~~t~----g~g~D~v~-d--~~g~~-------------------------~~~~~~~~~l~~~G~~v~ 264 (352)
T 3fpc_A 228 LKATD----GKGVDKVV-I--AGGDV-------------------------HTFAQAVKMIKPGSDIGN 264 (352)
T ss_dssp HHHTT----TCCEEEEE-E--CSSCT-------------------------THHHHHHHHEEEEEEEEE
T ss_pred HHHcC----CCCCCEEE-E--CCCCh-------------------------HHHHHHHHHHhcCCEEEE
Confidence 00001 13589887 3 44432 247788999999999984
No 313
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.01 E-value=0.046 Score=57.70 Aligned_cols=102 Identities=21% Similarity=0.253 Sum_probs=65.0
Q ss_pred cCCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccc
Q psy17365 173 LDVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~ 251 (646)
.++++|++||-.+||+ |..++|+|..++ ...|+++|.+++|++.++ .+|...+ ++.+...+....
T Consensus 186 ~~~~~g~~VlV~GaG~vG~~a~qlak~~G--------a~~Vi~~~~~~~~~~~a~----~lGa~~v--i~~~~~~~~~~~ 251 (371)
T 1f8f_A 186 LKVTPASSFVTWGAGAVGLSALLAAKVCG--------ASIIIAVDIVESRLELAK----QLGATHV--INSKTQDPVAAI 251 (371)
T ss_dssp TCCCTTCEEEEESCSHHHHHHHHHHHHHT--------CSEEEEEESCHHHHHHHH----HHTCSEE--EETTTSCHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC--------CCeEEEECCCHHHHHHHH----HcCCCEE--ecCCccCHHHHH
Confidence 4688999999998776 667777777652 447999999999987764 4676532 332221111100
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
. .. ....||.|+- |+|.. ..+..++++|++||++|..
T Consensus 252 ~-~~----~~gg~D~vid---~~g~~-------------------------~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 252 K-EI----TDGGVNFALE---STGSP-------------------------EILKQGVDALGILGKIAVV 288 (371)
T ss_dssp H-HH----TTSCEEEEEE---CSCCH-------------------------HHHHHHHHTEEEEEEEEEC
T ss_pred H-Hh----cCCCCcEEEE---CCCCH-------------------------HHHHHHHHHHhcCCEEEEe
Confidence 0 00 0125898774 33321 3578889999999999853
No 314
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=94.99 E-value=0.021 Score=63.22 Aligned_cols=93 Identities=12% Similarity=0.105 Sum_probs=58.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
..-+|+|+|||.||.+.-+..+ +--.|+|+|+++..++..+.|.. ..+...+++.|...+.........
T Consensus 87 ~~~~viDLFaG~GGlslG~~~a---------G~~~v~avE~d~~A~~ty~~N~~--~~p~~~~~~~DI~~i~~~~~~~~~ 155 (482)
T 3me5_A 87 YAFRFIDLFAGIGGIRRGFESI---------GGQCVFTSEWNKHAVRTYKANHY--CDPATHHFNEDIRDITLSHQEGVS 155 (482)
T ss_dssp CSEEEEEESCTTSHHHHHHHTT---------TEEEEEEECCCHHHHHHHHHHSC--CCTTTCEEESCTHHHHCTTCTTSC
T ss_pred ccceEEEecCCccHHHHHHHHC---------CCEEEEEEeCCHHHHHHHHHhcc--cCCCcceeccchhhhhhccccccc
Confidence 3468999999999998876432 22358999999999998887742 123445667887655310000000
Q ss_pred C-------CCCCCCCCeeecCCCCCCCcccc
Q psy17365 257 G-------NKVPMKFDRVLCDVPCTGDGTMR 280 (646)
Q Consensus 257 g-------~~~~~~FD~IL~D~PCSG~G~lr 280 (646)
. ......+|+|+..+||-+.-...
T Consensus 156 ~~~~~~~i~~~~~~~Dvl~gGpPCQ~FS~AG 186 (482)
T 3me5_A 156 DEAAAEHIRQHIPEHDVLLAGFPCQPFSLAG 186 (482)
T ss_dssp HHHHHHHHHHHSCCCSEEEEECCCCCC----
T ss_pred hhhHHhhhhhcCCCCCEEEecCCCcchhhhC
Confidence 0 00123689999999999877654
No 315
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.75 E-value=0.052 Score=56.78 Aligned_cols=91 Identities=13% Similarity=0.049 Sum_probs=62.4
Q ss_pred CCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccc
Q psy17365 174 DVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 174 d~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~ 252 (646)
.+++|++||-.+||+ |..++|+|..++ ..|++.|.+++|++.+ +.+|...+. .|...+.
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~G---------a~Vi~~~~~~~~~~~~----~~lGa~~v~---~~~~~~~---- 232 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMG---------AEVSVFARNEHKKQDA----LSMGVKHFY---TDPKQCK---- 232 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTT---------CEEEEECSSSTTHHHH----HHTTCSEEE---SSGGGCC----
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCC---------CeEEEEeCCHHHHHHH----HhcCCCeec---CCHHHHh----
Confidence 688999999998765 556666666542 3899999999998766 457876543 3322211
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
..+|.|+- |+|.. ..+..++++|++||++|..
T Consensus 233 ---------~~~D~vid---~~g~~-------------------------~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 233 ---------EELDFIIS---TIPTH-------------------------YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp ---------SCEEEEEE---CCCSC-------------------------CCHHHHHTTEEEEEEEEEC
T ss_pred ---------cCCCEEEE---CCCcH-------------------------HHHHHHHHHHhcCCEEEEE
Confidence 26898874 44422 1267789999999999853
No 316
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=94.67 E-value=0.048 Score=58.23 Aligned_cols=50 Identities=20% Similarity=0.218 Sum_probs=40.0
Q ss_pred cCCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q psy17365 173 LDVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS 234 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~ 234 (646)
.++++|++||-.+||+ |..++|+|..+ +.+.|+++|.+++|++.+ +.+|.
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlak~~--------Ga~~Vi~~~~~~~~~~~a----~~lGa 231 (398)
T 2dph_A 181 AGVKPGSHVYIAGAGPVGRCAAAGARLL--------GAACVIVGDQNPERLKLL----SDAGF 231 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHH--------TCSEEEEEESCHHHHHHH----HTTTC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc--------CCCEEEEEcCCHHHHHHH----HHcCC
Confidence 4688999999999876 77778888765 245899999999998765 45776
No 317
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=94.48 E-value=0.03 Score=64.38 Aligned_cols=138 Identities=13% Similarity=0.086 Sum_probs=83.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhc----CCCCCCCcEEEEEcCCHHHHHHHHHHH--------------HHc-----
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAA----DSNPVPSGLVVANDVDNNRCYMLVHQA--------------KRL----- 232 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~----~~~~~~~G~VvA~Dis~~Rl~~L~~n~--------------~rl----- 232 (646)
++.-+|+|+|-|.|--++.+.+..... .......-.++++|..+-....|.+-+ +..
T Consensus 57 ~~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (689)
T 3pvc_A 57 QQSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLA 136 (689)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCS
T ss_pred CCceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCC
Confidence 344689999999999988887765211 000011356899999664444443311 111
Q ss_pred C-----CC----CeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHH
Q psy17365 233 N-----SP----CAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYR 303 (646)
Q Consensus 233 g-----~~----ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~ 303 (646)
| .. .+.+..+|+........ . .....||.|++|+.. -.+||++|.. .
T Consensus 137 ~~~r~~~~~~~~~l~l~~gd~~~~l~~~~---~--~~~~~~da~flD~f~-----p~~np~~w~~--------------~ 192 (689)
T 3pvc_A 137 GCHRILLADGAITLDLWFGDVNTLLPTLD---D--SLNNQVDAWFLDGFA-----PAKNPDMWNE--------------Q 192 (689)
T ss_dssp EEEEEEETTTTEEEEEEESCHHHHGGGCC---G--GGTTCEEEEEECSSC-----C--CCTTCSH--------------H
T ss_pred CceEEEecCCcEEEEEEccCHHHHHhhcc---c--ccCCceeEEEECCCC-----CCCChhhhhH--------------H
Confidence 1 11 24456677754321110 0 002469999999742 2479998653 6
Q ss_pred HHHHHHHhhccCCeEEEEcCCCCccccHHHHHHHHHHccCc
Q psy17365 304 IVKRGVEMLAVGGKIAYSTCSLNPLEDEAVIQRLIVETQGA 344 (646)
Q Consensus 304 IL~~A~~lLKpGG~LVYSTCSl~p~ENE~VV~~~L~~~~~~ 344 (646)
++....+++++||++..-||. ..|...|.+.+..
T Consensus 193 ~~~~l~~~~~~g~~~~t~~~~-------~~vr~~l~~aGf~ 226 (689)
T 3pvc_A 193 LFNAMARMTRPGGTFSTFTAA-------GFVRRGLQQAGFN 226 (689)
T ss_dssp HHHHHHHHEEEEEEEEESCCC-------HHHHHHHHHTTCE
T ss_pred HHHHHHHHhCCCCEEEeccCc-------HHHHHHHHhCCeE
Confidence 788888999999988755554 4778888887643
No 318
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.46 E-value=0.057 Score=57.17 Aligned_cols=102 Identities=16% Similarity=0.199 Sum_probs=64.7
Q ss_pred cCCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecC--CCCCcc
Q psy17365 173 LDVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHD--ASVMPN 249 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~D--a~~~p~ 249 (646)
.++++|++||=++||+ |..++|+|..++ ...|+++|.+++|++.+ +++|...+ ++.. ...+..
T Consensus 189 ~~~~~g~~VlV~GaG~vG~~a~q~a~~~G--------a~~Vi~~~~~~~~~~~a----~~lGa~~v--i~~~~~~~~~~~ 254 (378)
T 3uko_A 189 AKVEPGSNVAIFGLGTVGLAVAEGAKTAG--------ASRIIGIDIDSKKYETA----KKFGVNEF--VNPKDHDKPIQE 254 (378)
T ss_dssp TCCCTTCCEEEECCSHHHHHHHHHHHHHT--------CSCEEEECSCTTHHHHH----HTTTCCEE--ECGGGCSSCHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC--------CCeEEEEcCCHHHHHHH----HHcCCcEE--EccccCchhHHH
Confidence 4688999999998754 556667766652 45899999999998765 46787643 2221 111111
Q ss_pred ccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccC-CeEEEE
Q psy17365 250 VLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVG-GKIAYS 321 (646)
Q Consensus 250 ~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpG-G~LVYS 321 (646)
... . .....||.|+- |+|.. ..+..++++|++| |++|..
T Consensus 255 ~i~-~----~~~gg~D~vid---~~g~~-------------------------~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 255 VIV-D----LTDGGVDYSFE---CIGNV-------------------------SVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp HHH-H----HTTSCBSEEEE---CSCCH-------------------------HHHHHHHHTBCTTTCEEEEC
T ss_pred HHH-H----hcCCCCCEEEE---CCCCH-------------------------HHHHHHHHHhhccCCEEEEE
Confidence 000 0 00126898874 44431 3578899999997 998853
No 319
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.29 E-value=0.074 Score=56.16 Aligned_cols=102 Identities=10% Similarity=0.068 Sum_probs=63.9
Q ss_pred cCCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCC--CCCcc
Q psy17365 173 LDVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDA--SVMPN 249 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da--~~~p~ 249 (646)
.++++|++||=.+||+ |..++|+|..++ ...|++.|.+++|++.+ +.+|...+ ++.+. ..+..
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G--------a~~Vi~~~~~~~~~~~a----~~lGa~~v--i~~~~~~~~~~~ 252 (373)
T 1p0f_A 187 AKVTPGSTCAVFGLGGVGFSAIVGCKAAG--------ASRIIGVGTHKDKFPKA----IELGATEC--LNPKDYDKPIYE 252 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHHT--------CSEEEEECSCGGGHHHH----HHTTCSEE--ECGGGCSSCHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC--------CCeEEEECCCHHHHHHH----HHcCCcEE--EecccccchHHH
Confidence 4688999999998765 556667766652 44799999999998765 45787533 22211 11111
Q ss_pred ccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccC-CeEEEE
Q psy17365 250 VLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVG-GKIAYS 321 (646)
Q Consensus 250 ~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpG-G~LVYS 321 (646)
... ... ...||.|+- |+|.. ..+..++++|++| |++|..
T Consensus 253 ~i~-~~t----~gg~Dvvid---~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 253 VIC-EKT----NGGVDYAVE---CAGRI-------------------------ETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp HHH-HHT----TSCBSEEEE---CSCCH-------------------------HHHHHHHHTBCTTTCEEEEC
T ss_pred HHH-HHh----CCCCCEEEE---CCCCH-------------------------HHHHHHHHHHhcCCCEEEEE
Confidence 000 000 125898874 44421 3478889999999 999853
No 320
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.11 E-value=0.042 Score=58.62 Aligned_cols=51 Identities=18% Similarity=0.175 Sum_probs=38.9
Q ss_pred cCCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q psy17365 173 LDVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP 235 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ 235 (646)
+++++|++||-.+||+ |..++|+|..+ +...|+++|.+++|++.++ .+|..
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~~--------Ga~~Vi~~~~~~~~~~~a~----~lGa~ 232 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARLL--------GAAVVIVGDLNPARLAHAK----AQGFE 232 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHT--------TCSEEEEEESCHHHHHHHH----HTTCE
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHC--------CCCeEEEEcCCHHHHHHHH----HcCCc
Confidence 4688999999998765 66667777664 2447999999999988764 57873
No 321
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=94.06 E-value=0.079 Score=56.00 Aligned_cols=102 Identities=16% Similarity=0.192 Sum_probs=62.8
Q ss_pred cCCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCC--CCCcc
Q psy17365 173 LDVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDA--SVMPN 249 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da--~~~p~ 249 (646)
.++++|++||=.+||+ |..++|+|..+ +...|++.|.+++|++.+ +.+|...+ ++.+. ..+..
T Consensus 191 ~~~~~g~~VlV~GaG~vG~~aiqlak~~--------Ga~~Vi~~~~~~~~~~~a----~~lGa~~v--i~~~~~~~~~~~ 256 (376)
T 1e3i_A 191 AKVTPGSTCAVFGLGCVGLSAIIGCKIA--------GASRIIAIDINGEKFPKA----KALGATDC--LNPRELDKPVQD 256 (376)
T ss_dssp SCCCTTCEEEEECCSHHHHHHHHHHHHT--------TCSEEEEECSCGGGHHHH----HHTTCSEE--ECGGGCSSCHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc--------CCCeEEEEcCCHHHHHHH----HHhCCcEE--EccccccchHHH
Confidence 4688999999998654 44556666554 244799999999998765 35787533 22211 11111
Q ss_pred ccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccC-CeEEEE
Q psy17365 250 VLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVG-GKIAYS 321 (646)
Q Consensus 250 ~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpG-G~LVYS 321 (646)
... .. ....+|.|+- |+|.. ..+..++++|++| |++|..
T Consensus 257 ~v~-~~----~~~g~Dvvid---~~G~~-------------------------~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 257 VIT-EL----TAGGVDYSLD---CAGTA-------------------------QTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp HHH-HH----HTSCBSEEEE---SSCCH-------------------------HHHHHHHHTBCTTTCEEEEC
T ss_pred HHH-HH----hCCCccEEEE---CCCCH-------------------------HHHHHHHHHhhcCCCEEEEE
Confidence 000 00 0125898873 44421 3477899999999 999854
No 322
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=93.98 E-value=0.22 Score=53.34 Aligned_cols=52 Identities=19% Similarity=0.250 Sum_probs=35.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhh----c---CCCCCCCcEEEEEcCCHHHHHHHHHHH
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHA----A---DSNPVPSGLVVANDVDNNRCYMLVHQA 229 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~----~---~~~~~~~G~VvA~Dis~~Rl~~L~~n~ 229 (646)
..+|+|+|||+|.-|..+++.+-. . .+...+.-.|+.||.-..-...|-..+
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L 111 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLL 111 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhh
Confidence 578999999999999988654421 0 111225678999998766655554443
No 323
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=93.98 E-value=0.089 Score=55.52 Aligned_cols=102 Identities=10% Similarity=0.052 Sum_probs=62.8
Q ss_pred cCCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCC--CCCcc
Q psy17365 173 LDVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDA--SVMPN 249 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da--~~~p~ 249 (646)
.++++|++||-.+||+ |..++|+|..+ +...|++.|.++.|++.+ +++|...+ +..+. ..+..
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~a~qla~~~--------Ga~~Vi~~~~~~~~~~~~----~~lGa~~v--i~~~~~~~~~~~ 252 (374)
T 2jhf_A 187 AKVTQGSTCAVFGLGGVGLSVIMGCKAA--------GAARIIGVDINKDKFAKA----KEVGATEC--VNPQDYKKPIQE 252 (374)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHT--------TCSEEEEECSCGGGHHHH----HHTTCSEE--ECGGGCSSCHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc--------CCCeEEEEcCCHHHHHHH----HHhCCceE--ecccccchhHHH
Confidence 4688999999998754 55556666554 244799999999998765 45787533 22211 11111
Q ss_pred ccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccC-CeEEEE
Q psy17365 250 VLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVG-GKIAYS 321 (646)
Q Consensus 250 ~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpG-G~LVYS 321 (646)
... ... ...+|.|+- |+|.. ..+..++++|++| |++|..
T Consensus 253 ~~~-~~~----~~g~D~vid---~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 253 VLT-EMS----NGGVDFSFE---VIGRL-------------------------DTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp HHH-HHT----TSCBSEEEE---CSCCH-------------------------HHHHHHHHHBCTTTCEEEEC
T ss_pred HHH-HHh----CCCCcEEEE---CCCCH-------------------------HHHHHHHHHhhcCCcEEEEe
Confidence 000 000 125898874 33321 3477889999999 998853
No 324
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=93.98 E-value=0.073 Score=55.48 Aligned_cols=101 Identities=16% Similarity=0.215 Sum_probs=65.2
Q ss_pred CCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccc
Q psy17365 174 DVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 174 d~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~ 252 (646)
.+++|++||=.+||+ |..++|+|..+ +...|+++|.+++|++.+ +.+|...+ ++.+. .+.....
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~--------g~~~Vi~~~~~~~~~~~~----~~lGa~~~--i~~~~-~~~~~v~ 232 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAV--------SAARVIAVDLDDDRLALA----REVGADAA--VKSGA-GAADAIR 232 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHH--------CCCEEEEEESCHHHHHHH----HHTTCSEE--EECST-THHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--------CCCEEEEEcCCHHHHHHH----HHcCCCEE--EcCCC-cHHHHHH
Confidence 578999999998765 66667777665 246899999999998876 45787643 22221 1111000
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
.... ...+|.|+- |+|.. ..+..++++|++||++|..
T Consensus 233 ~~t~----g~g~d~v~d---~~G~~-------------------------~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 233 ELTG----GQGATAVFD---FVGAQ-------------------------STIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp HHHG----GGCEEEEEE---SSCCH-------------------------HHHHHHHHHEEEEEEEEEC
T ss_pred HHhC----CCCCeEEEE---CCCCH-------------------------HHHHHHHHHHhcCCEEEEE
Confidence 0000 136887774 44421 3578899999999999853
No 325
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=93.97 E-value=0.085 Score=55.71 Aligned_cols=102 Identities=14% Similarity=0.129 Sum_probs=62.9
Q ss_pred cCCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCC--CCCcc
Q psy17365 173 LDVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDA--SVMPN 249 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da--~~~p~ 249 (646)
.++++|++||-.+||+ |..++|+|..+ +...|++.|.+++|++.++ ++|...+ +.... ..+..
T Consensus 188 ~~~~~g~~VlV~GaG~vG~~a~qla~~~--------Ga~~Vi~~~~~~~~~~~~~----~lGa~~v--i~~~~~~~~~~~ 253 (374)
T 1cdo_A 188 AKVEPGSTCAVFGLGAVGLAAVMGCHSA--------GAKRIIAVDLNPDKFEKAK----VFGATDF--VNPNDHSEPISQ 253 (374)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHT--------TCSEEEEECSCGGGHHHHH----HTTCCEE--ECGGGCSSCHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc--------CCCEEEEEcCCHHHHHHHH----HhCCceE--EeccccchhHHH
Confidence 4688999999998654 45556666554 2447999999999987654 5787533 22211 11111
Q ss_pred ccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccC-CeEEEE
Q psy17365 250 VLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVG-GKIAYS 321 (646)
Q Consensus 250 ~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpG-G~LVYS 321 (646)
... .. ....+|.|+- |+|.+ ..+..++++|++| |++|..
T Consensus 254 ~~~-~~----~~~g~D~vid---~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 254 VLS-KM----TNGGVDFSLE---CVGNV-------------------------GVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp HHH-HH----HTSCBSEEEE---CSCCH-------------------------HHHHHHHHTBCTTTCEEEEC
T ss_pred HHH-HH----hCCCCCEEEE---CCCCH-------------------------HHHHHHHHHhhcCCcEEEEE
Confidence 000 00 0125898874 33321 3477889999999 999854
No 326
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=93.95 E-value=0.09 Score=55.41 Aligned_cols=102 Identities=11% Similarity=0.155 Sum_probs=63.2
Q ss_pred cCCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCC--CCCcc
Q psy17365 173 LDVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDA--SVMPN 249 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da--~~~p~ 249 (646)
.++++|++||-.+||+ |..++|+|..++ ...|++.|.+++|++.++ .+|...+ +.... ..+..
T Consensus 186 ~~~~~g~~VlV~GaG~vG~~avqla~~~G--------a~~Vi~~~~~~~~~~~~~----~lGa~~v--i~~~~~~~~~~~ 251 (373)
T 2fzw_A 186 AKLEPGSVCAVFGLGGVGLAVIMGCKVAG--------ASRIIGVDINKDKFARAK----EFGATEC--INPQDFSKPIQE 251 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHHT--------CSEEEEECSCGGGHHHHH----HHTCSEE--ECGGGCSSCHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC--------CCeEEEEcCCHHHHHHHH----HcCCceE--eccccccccHHH
Confidence 4688999999998754 555666666542 447999999999987764 4677533 22211 11111
Q ss_pred ccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccC-CeEEEE
Q psy17365 250 VLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVG-GKIAYS 321 (646)
Q Consensus 250 ~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpG-G~LVYS 321 (646)
... ... ...+|.|+- |+|.. ..+..++++|++| |++|..
T Consensus 252 ~v~-~~~----~~g~D~vid---~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 252 VLI-EMT----DGGVDYSFE---CIGNV-------------------------KVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp HHH-HHT----TSCBSEEEE---CSCCH-------------------------HHHHHHHHTBCTTTCEEEEC
T ss_pred HHH-HHh----CCCCCEEEE---CCCcH-------------------------HHHHHHHHhhccCCcEEEEE
Confidence 000 000 125898874 33321 3477889999999 999853
No 327
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=93.57 E-value=0.17 Score=52.82 Aligned_cols=105 Identities=15% Similarity=0.199 Sum_probs=62.3
Q ss_pred cCCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCC-CCCccc
Q psy17365 173 LDVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDA-SVMPNV 250 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da-~~~p~~ 250 (646)
.++++|++||-.+||+ |..++++|..++ . .|++.|.+++|++.++ .+|...+ ++.+. ..+...
T Consensus 164 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G--------a-~Vi~~~~~~~~~~~~~----~lGa~~~--~~~~~~~~~~~~ 228 (352)
T 1e3j_A 164 AGVQLGTTVLVIGAGPIGLVSVLAAKAYG--------A-FVVCTARSPRRLEVAK----NCGADVT--LVVDPAKEEESS 228 (352)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTT--------C-EEEEEESCHHHHHHHH----HTTCSEE--EECCTTTSCHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC--------C-EEEEEcCCHHHHHHHH----HhCCCEE--EcCcccccHHHH
Confidence 4688999999998754 555566665542 3 4999999999987764 5787632 22221 121110
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
......+ .....+|.|+- |+|.. ..+..++++|++||++|..
T Consensus 229 i~~~~~~-~~g~g~D~vid---~~g~~-------------------------~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 229 IIERIRS-AIGDLPNVTID---CSGNE-------------------------KCITIGINITRTGGTLMLV 270 (352)
T ss_dssp HHHHHHH-HSSSCCSEEEE---CSCCH-------------------------HHHHHHHHHSCTTCEEEEC
T ss_pred HHHHhcc-ccCCCCCEEEE---CCCCH-------------------------HHHHHHHHHHhcCCEEEEE
Confidence 0000000 00135898874 33321 2467889999999999853
No 328
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=93.43 E-value=0.083 Score=55.46 Aligned_cols=104 Identities=18% Similarity=0.201 Sum_probs=63.1
Q ss_pred cCCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCC---CCCc
Q psy17365 173 LDVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDA---SVMP 248 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da---~~~p 248 (646)
..+++|++||=.+||+ |..++|+|..+ +...|++.|.+++|++.+++ + ...+.....+. ..+.
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~aiqlak~~--------Ga~~Vi~~~~~~~~~~~a~~----l-~~~~~~~~~~~~~~~~~~ 241 (363)
T 3m6i_A 175 AGVRLGDPVLICGAGPIGLITMLCAKAA--------GACPLVITDIDEGRLKFAKE----I-CPEVVTHKVERLSAEESA 241 (363)
T ss_dssp HTCCTTCCEEEECCSHHHHHHHHHHHHT--------TCCSEEEEESCHHHHHHHHH----H-CTTCEEEECCSCCHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc--------CCCEEEEECCCHHHHHHHHH----h-chhcccccccccchHHHH
Confidence 4689999999988754 55666666654 24459999999999887764 3 33333222221 1111
Q ss_pred cccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 249 NVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 249 ~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
.......+ ...+|.|+- |+|.. ..+..++++|++||++|..
T Consensus 242 ~~v~~~t~----g~g~Dvvid---~~g~~-------------------------~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 242 KKIVESFG----GIEPAVALE---CTGVE-------------------------SSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp HHHHHHTS----SCCCSEEEE---CSCCH-------------------------HHHHHHHHHSCTTCEEEEC
T ss_pred HHHHHHhC----CCCCCEEEE---CCCCh-------------------------HHHHHHHHHhcCCCEEEEE
Confidence 00000001 136898874 44421 2478889999999999864
No 329
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=93.24 E-value=0.11 Score=54.82 Aligned_cols=97 Identities=14% Similarity=0.068 Sum_probs=60.5
Q ss_pred CCCeEEEEc-CC-CchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 177 THHKVLDMC-AA-PGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 177 pg~~VLDmC-Aa-PGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
+|++||=.+ +| -|..++|+|..+. ...|++.|.+++|++.++ .+|...+ ++... .+..... .
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~--------g~~Vi~~~~~~~~~~~~~----~lGad~v--i~~~~-~~~~~v~-~ 234 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT--------DLTVIATASRPETQEWVK----SLGAHHV--IDHSK-PLAAEVA-A 234 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC--------CSEEEEECSSHHHHHHHH----HTTCSEE--ECTTS-CHHHHHH-T
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc--------CCEEEEEeCCHHHHHHHH----HcCCCEE--EeCCC-CHHHHHH-H
Confidence 899999776 33 3556666666542 458999999999988764 4786543 22221 1111100 0
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
. ....+|.|+- |+|.+ ..+..++++|++||++|..
T Consensus 235 ~----~~~g~Dvvid---~~g~~-------------------------~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 235 L----GLGAPAFVFS---TTHTD-------------------------KHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp T----CSCCEEEEEE---CSCHH-------------------------HHHHHHHHHSCTTCEEEEC
T ss_pred h----cCCCceEEEE---CCCch-------------------------hhHHHHHHHhcCCCEEEEE
Confidence 1 1246897764 44432 3578899999999999853
No 330
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.18 E-value=0.14 Score=53.98 Aligned_cols=101 Identities=14% Similarity=0.109 Sum_probs=62.6
Q ss_pred cCCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccc
Q psy17365 173 LDVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~ 251 (646)
.++++|++||=.+||+ |..++++|..+ ...|++.|.+++|++.+ +.+|...+ +..+...+....
T Consensus 185 ~~~~~g~~VlV~G~G~vG~~a~qla~~~---------Ga~Vi~~~~~~~~~~~~----~~lGa~~v--i~~~~~~~~~~v 249 (363)
T 3uog_A 185 GHLRAGDRVVVQGTGGVALFGLQIAKAT---------GAEVIVTSSSREKLDRA----FALGADHG--INRLEEDWVERV 249 (363)
T ss_dssp TCCCTTCEEEEESSBHHHHHHHHHHHHT---------TCEEEEEESCHHHHHHH----HHHTCSEE--EETTTSCHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc---------CCEEEEEecCchhHHHH----HHcCCCEE--EcCCcccHHHHH
Confidence 4688999999998665 55566666654 23899999999998775 45787543 222222211100
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
..... ...+|.|+- |+| +. .+..++++|++||++|..
T Consensus 250 ~~~~~----g~g~D~vid---~~g-~~-------------------------~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 250 YALTG----DRGADHILE---IAG-GA-------------------------GLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp HHHHT----TCCEEEEEE---ETT-SS-------------------------CHHHHHHHEEEEEEEEEE
T ss_pred HHHhC----CCCceEEEE---CCC-hH-------------------------HHHHHHHHhhcCCEEEEE
Confidence 00001 135897774 444 21 266788999999998854
No 331
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.13 E-value=0.09 Score=55.66 Aligned_cols=95 Identities=14% Similarity=0.055 Sum_probs=60.6
Q ss_pred CCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccc
Q psy17365 174 DVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 174 d~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~ 252 (646)
++++|++||-.+||+ |..++|+|..++ ..|++.|.+++|++.++ .+|...+ ++.....+.. ..
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~G---------a~Vi~~~~~~~~~~~a~----~lGa~~v--i~~~~~~~~~-~~ 254 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMG---------AHVVAFTTSEAKREAAK----ALGADEV--VNSRNADEMA-AH 254 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT---------CEEEEEESSGGGHHHHH----HHTCSEE--EETTCHHHHH-TT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC---------CEEEEEeCCHHHHHHHH----HcCCcEE--eccccHHHHH-Hh
Confidence 688999999998865 556666666542 36999999999987764 4676532 2222111100 00
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEE
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAY 320 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVY 320 (646)
...+|.|+- |+|.. . .+..++++|++||++|.
T Consensus 255 --------~~g~Dvvid---~~g~~------~-------------------~~~~~~~~l~~~G~iv~ 286 (369)
T 1uuf_A 255 --------LKSFDFILN---TVAAP------H-------------------NLDDFTTLLKRDGTMTL 286 (369)
T ss_dssp --------TTCEEEEEE---CCSSC------C-------------------CHHHHHTTEEEEEEEEE
T ss_pred --------hcCCCEEEE---CCCCH------H-------------------HHHHHHHHhccCCEEEE
Confidence 135898874 33421 1 25678899999999884
No 332
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=92.95 E-value=0.25 Score=59.12 Aligned_cols=89 Identities=13% Similarity=0.196 Sum_probs=58.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCC-cEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccc----cc
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPS-GLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNV----LY 252 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~-G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~----~~ 252 (646)
.-+|||+|||.||.+.-+.++ +- -.|.|+|+++..++..+.| .++..+++.|...+... ..
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A---------G~~~vv~avEid~~A~~ty~~N-----~p~~~~~~~DI~~l~~~~~~~di 605 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA---------GISDTLWAIEMWDPAAQAFRLN-----NPGSTVFTEDCNILLKLVMAGET 605 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH---------TSEEEEEEECSSHHHHHHHHHH-----CTTSEEECSCHHHHHHHHHHTCS
T ss_pred CCeEEEeccCccHHHHHHHHC---------CCCceEEEEECCHHHHHHHHHh-----CCCCccccccHHHHhhhccchhh
Confidence 457999999999999877543 22 3588999999999988776 34556666665432100 00
Q ss_pred cCCCCC--CCCCCCCeeecCCCCCCCcccc
Q psy17365 253 TDADGN--KVPMKFDRVLCDVPCTGDGTMR 280 (646)
Q Consensus 253 ~~~~g~--~~~~~FD~IL~D~PCSG~G~lr 280 (646)
....+. .....+|+|+.-+||-+.-...
T Consensus 606 ~~~~~~~lp~~~~vDll~GGpPCQ~FS~ag 635 (1002)
T 3swr_A 606 TNSRGQRLPQKGDVEMLCGGPPCQGFSGMN 635 (1002)
T ss_dssp BCTTCCBCCCTTTCSEEEECCCCTTCCSSS
T ss_pred hhhhhhhcccCCCeeEEEEcCCCcchhhhC
Confidence 000111 1124689999999999876543
No 333
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=92.76 E-value=1.2 Score=47.75 Aligned_cols=152 Identities=12% Similarity=0.008 Sum_probs=75.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHh----hhcC-----CCCCCCcEEEEEcCCHHHHHHH-------HHHH-HHcCC-CCeEE
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMI----HAAD-----SNPVPSGLVVANDVDNNRCYML-------VHQA-KRLNS-PCAII 239 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l----~~~~-----~~~~~~G~VvA~Dis~~Rl~~L-------~~n~-~rlg~-~ni~v 239 (646)
..+|+|+|||.|.-|..+++.+ .... +...|.-.|+.||+-..=...| .+.+ +..|. .+-.+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 4689999999999999887763 1110 0012567899999862222111 1111 23332 12345
Q ss_pred EecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCcccccc-----CCc----------chhhh-----hHH
Q psy17365 240 TNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTK-----WTP----------SNGNN-----LHG 299 (646)
Q Consensus 240 ~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~-----w~~----------~~~~~-----l~~ 299 (646)
+.+.+..|-... .....||.|.... ..--+.+.|..+.. |+. ..+.. ...
T Consensus 133 ~~gvpgSFy~rl-------fp~~S~d~v~Ss~---aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~ 202 (384)
T 2efj_A 133 IGAMPGSFYSRL-------FPEESMHFLHSCY---CLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTK 202 (384)
T ss_dssp EEECCSCTTSCC-------SCTTCEEEEEEES---CTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHH
T ss_pred EEecchhhhhcc-------CCCCceEEEEecc---eeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHH
Confidence 555555442211 1235688886521 11111222221111 221 11211 122
Q ss_pred HHHHHHHHHHHhhccCCeEEEEcCCCCcc--c--cHHHHHHHHH
Q psy17365 300 IQYRIVKRGVEMLAVGGKIAYSTCSLNPL--E--DEAVIQRLIV 339 (646)
Q Consensus 300 lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~--E--NE~VV~~~L~ 339 (646)
--..+|+.-.+-|+|||+||.++..-... + ....+..+|.
T Consensus 203 D~~~FL~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~ 246 (384)
T 2efj_A 203 DFTTFLRIHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSIN 246 (384)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHH
Confidence 22345777789999999999887765332 1 1115566654
No 334
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=92.63 E-value=0.38 Score=51.38 Aligned_cols=51 Identities=14% Similarity=0.230 Sum_probs=37.0
Q ss_pred CCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC
Q psy17365 174 DVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC 236 (646)
Q Consensus 174 d~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n 236 (646)
.+++|++||=.+||+ |..++|+|..+ +...|+++|.+++|++.++ ++|...
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~--------Ga~~Vi~~~~~~~~~~~~~----~lGa~~ 261 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHA--------GASKVILSEPSEVRRNLAK----ELGADH 261 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT--------TCSEEEEECSCHHHHHHHH----HHTCSE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--------CCCEEEEECCCHHHHHHHH----HcCCCE
Confidence 588999999888754 44555565553 3458999999999988764 567653
No 335
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=92.45 E-value=0.16 Score=53.82 Aligned_cols=102 Identities=20% Similarity=0.168 Sum_probs=61.4
Q ss_pred cC-CCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecC---CCCC
Q psy17365 173 LD-VQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHD---ASVM 247 (646)
Q Consensus 173 Ld-~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~D---a~~~ 247 (646)
++ +++|++||-.+||+ |..++|+|..+ +...|++.|.+++|++.++ .+|...+ +..+ ...+
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~--------Ga~~Vi~~~~~~~~~~~~~----~lGa~~v--i~~~~~~~~~~ 255 (380)
T 1vj0_A 190 YPESFAGKTVVIQGAGPLGLFGVVIARSL--------GAENVIVIAGSPNRLKLAE----EIGADLT--LNRRETSVEER 255 (380)
T ss_dssp CSSCCBTCEEEEECCSHHHHHHHHHHHHT--------TBSEEEEEESCHHHHHHHH----HTTCSEE--EETTTSCHHHH
T ss_pred cCCCCCCCEEEEECcCHHHHHHHHHHHHc--------CCceEEEEcCCHHHHHHHH----HcCCcEE--EeccccCcchH
Confidence 36 88999999998543 44455555543 2358999999999987764 5787533 2222 1111
Q ss_pred ccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEE
Q psy17365 248 PNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAY 320 (646)
Q Consensus 248 p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVY 320 (646)
......... ...+|.|+- |+|.+ ..+..++++|++||++|.
T Consensus 256 ~~~v~~~~~----g~g~Dvvid---~~g~~-------------------------~~~~~~~~~l~~~G~iv~ 296 (380)
T 1vj0_A 256 RKAIMDITH----GRGADFILE---ATGDS-------------------------RALLEGSELLRRGGFYSV 296 (380)
T ss_dssp HHHHHHHTT----TSCEEEEEE---CSSCT-------------------------THHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHhC----CCCCcEEEE---CCCCH-------------------------HHHHHHHHHHhcCCEEEE
Confidence 100000001 125898874 34421 246778999999999884
No 336
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=92.41 E-value=0.41 Score=49.58 Aligned_cols=103 Identities=15% Similarity=0.076 Sum_probs=63.2
Q ss_pred cCCCCCCeEEEEcCCCch-HHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccc
Q psy17365 173 LDVQTHHKVLDMCAAPGS-KTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGg-KT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~ 251 (646)
..+++|++||=.+||+.| .++|+|..+ +...++++|.+++|++.+ +++|...+ ++..-.......
T Consensus 156 ~~~~~g~~VlV~GaG~vG~~aiq~ak~~--------G~~~vi~~~~~~~k~~~a----~~lGa~~~--i~~~~~~~~~~~ 221 (346)
T 4a2c_A 156 AQGCENKNVIIIGAGTIGLLAIQCAVAL--------GAKSVTAIDISSEKLALA----KSFGAMQT--FNSSEMSAPQMQ 221 (346)
T ss_dssp TTCCTTSEEEEECCSHHHHHHHHHHHHT--------TCSEEEEEESCHHHHHHH----HHTTCSEE--EETTTSCHHHHH
T ss_pred hccCCCCEEEEECCCCcchHHHHHHHHc--------CCcEEEEEechHHHHHHH----HHcCCeEE--EeCCCCCHHHHH
Confidence 367899999999886543 445555554 356789999999998765 46787643 333222211110
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
....+ ...+|.|+- |+|.+ ..+..++++|++||+++..
T Consensus 222 ~~~~~----~~g~d~v~d---~~G~~-------------------------~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 222 SVLRE----LRFNQLILE---TAGVP-------------------------QTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp HHHGG----GCSSEEEEE---CSCSH-------------------------HHHHHHHHHCCTTCEEEEC
T ss_pred Hhhcc----cCCcccccc---ccccc-------------------------chhhhhhheecCCeEEEEE
Confidence 00001 134676664 34432 3577889999999999853
No 337
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=92.11 E-value=0.066 Score=55.05 Aligned_cols=79 Identities=11% Similarity=0.067 Sum_probs=44.8
Q ss_pred CCeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhcc
Q psy17365 235 PCAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAV 314 (646)
Q Consensus 235 ~ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKp 314 (646)
..+.++++|+..+.... ....||.|++|||.-........++.+. ..............++..+.++|||
T Consensus 20 ~~~~i~~gD~~~~l~~l--------~~~s~DlIvtdPPY~~~~~y~~~~~~~~--~~~~~~~~l~~l~~~~~~~~rvLk~ 89 (297)
T 2zig_A 20 GVHRLHVGDAREVLASF--------PEASVHLVVTSPPYWTLKRYEDTPGQLG--HIEDYEAFLDELDRVWREVFRLLVP 89 (297)
T ss_dssp -CEEEEESCHHHHHTTS--------CTTCEEEEEECCCCCCCC-------CCH--HHHHHHHHHHHHHHHHHHHHHHEEE
T ss_pred cCCEEEECcHHHHHhhC--------CCCceeEEEECCCCCCccccCCChhhhc--ccccHHHHHHHHHHHHHHHHHHcCC
Confidence 35788999987632211 1257999999999865432222222110 0011111223345788999999999
Q ss_pred CCeEEEEcC
Q psy17365 315 GGKIAYSTC 323 (646)
Q Consensus 315 GG~LVYSTC 323 (646)
||.|+....
T Consensus 90 ~G~l~i~~~ 98 (297)
T 2zig_A 90 GGRLVIVVG 98 (297)
T ss_dssp EEEEEEEEC
T ss_pred CcEEEEEEC
Confidence 999987643
No 338
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=91.58 E-value=0.53 Score=54.81 Aligned_cols=48 Identities=15% Similarity=0.121 Sum_probs=35.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHH
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQ 228 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n 228 (646)
..+|||++||.||.++-+.+..+.. + ..=-.++|+|+++..+++.+.|
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~-~--~~f~vv~AvE~d~~A~~Ty~~N 259 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALS-G--LKLETRWAVDFNSFACQSLKYN 259 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHH-T--EEEEEEEEEESCHHHHHHHHHH
T ss_pred CCeEEEeCcCccHHHHHHHHhCccc-C--CceeEEEEEeCCHHHHHHHHHH
Confidence 4579999999999998886653210 0 0002689999999999998877
No 339
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=91.41 E-value=0.48 Score=54.07 Aligned_cols=135 Identities=13% Similarity=0.113 Sum_probs=80.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhc----CCCCCCCcEEEEEcC---CHHHHH-HHH----------HHHHHcCC--C-
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAA----DSNPVPSGLVVANDV---DNNRCY-MLV----------HQAKRLNS--P- 235 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~----~~~~~~~G~VvA~Di---s~~Rl~-~L~----------~n~~rlg~--~- 235 (646)
+.-+|||+|-|.|--++...+..... .......-.++++|. +..-+. .+. +..+.... +
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 44589999999999888777664210 000001235899999 555443 111 11112211 1
Q ss_pred -----------CeEEEecCCCCC-ccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHH
Q psy17365 236 -----------CAIITNHDASVM-PNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYR 303 (646)
Q Consensus 236 -----------ni~v~~~Da~~~-p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~ 303 (646)
.+.+..+|+... +.+.. .....||.|++|+-. -.+||++|.. .
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~------~~~~~~d~~~~D~f~-----p~~np~~w~~--------------~ 200 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDD------SLNQKVDAWFLDGFA-----PAKNPDMWTQ--------------N 200 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCG------GGTTCEEEEEECCSC-----GGGCGGGSCH--------------H
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhccc------ccCCcccEEEECCCC-----CcCChhhhhH--------------H
Confidence 123445666542 21100 002469999999742 2579998653 6
Q ss_pred HHHHHHHhhccCCeEEEEcCCCCccccHHHHHHHHHHccC
Q psy17365 304 IVKRGVEMLAVGGKIAYSTCSLNPLEDEAVIQRLIVETQG 343 (646)
Q Consensus 304 IL~~A~~lLKpGG~LVYSTCSl~p~ENE~VV~~~L~~~~~ 343 (646)
++....+++++||++...||. ..|...|.+.+-
T Consensus 201 ~~~~l~~~~~~g~~~~t~~~~-------~~vr~~L~~aGf 233 (676)
T 3ps9_A 201 LFNAMARLARPGGTLATFTSA-------GFVRRGLQDAGF 233 (676)
T ss_dssp HHHHHHHHEEEEEEEEESCCC-------HHHHHHHHHHTC
T ss_pred HHHHHHHHhCCCCEEEeccCc-------HHHHHHHHhCCe
Confidence 888889999999987644333 478888888764
No 340
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=91.24 E-value=0.57 Score=50.52 Aligned_cols=45 Identities=13% Similarity=0.030 Sum_probs=34.8
Q ss_pred CeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcE----EEEEcCCHHHHHHHHHHHH
Q psy17365 179 HKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGL----VVANDVDNNRCYMLVHQAK 230 (646)
Q Consensus 179 ~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~----VvA~Dis~~Rl~~L~~n~~ 230 (646)
-+|||+|||-||.+..+-++-. +-.. |.|+|+++..+.....|..
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~-------~~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIAR-------SKNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHH-------HHTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred ceEEEEecCcCHHHHHHHHhCC-------ccccceeeEEEEecCHHHHHHHHHHcC
Confidence 3899999999999887765421 0124 8999999999998888764
No 341
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=90.93 E-value=0.13 Score=53.92 Aligned_cols=51 Identities=10% Similarity=-0.033 Sum_probs=37.4
Q ss_pred cCCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC
Q psy17365 173 LDVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC 236 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n 236 (646)
+++++|++||-.+||+ |..++++|..++ ..|++.|.+++|++.++ .+|...
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~G---------a~Vi~~~~~~~~~~~~~----~lGa~~ 226 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMG---------AETYVISRSSRKREDAM----KMGADH 226 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHT---------CEEEEEESSSTTHHHHH----HHTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC---------CEEEEEcCCHHHHHHHH----HcCCCE
Confidence 3688999999999854 555666666542 36999999999887664 367654
No 342
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=90.89 E-value=0.37 Score=50.15 Aligned_cols=102 Identities=14% Similarity=0.165 Sum_probs=60.4
Q ss_pred cCCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccc
Q psy17365 173 LDVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~ 251 (646)
+++ +|++||-.+||+ |..++++|..+ +.+.|++.|.++++++.++ .+|... +++.+...+....
T Consensus 164 ~~~-~g~~VlV~GaG~vG~~~~q~a~~~--------Ga~~Vi~~~~~~~~~~~~~----~~Ga~~--~~~~~~~~~~~~v 228 (348)
T 2d8a_A 164 GPI-SGKSVLITGAGPLGLLGIAVAKAS--------GAYPVIVSEPSDFRRELAK----KVGADY--VINPFEEDVVKEV 228 (348)
T ss_dssp SCC-TTCCEEEECCSHHHHHHHHHHHHT--------TCCSEEEECSCHHHHHHHH----HHTCSE--EECTTTSCHHHHH
T ss_pred cCC-CCCEEEEECCCHHHHHHHHHHHHc--------CCCEEEEECCCHHHHHHHH----HhCCCE--EECCCCcCHHHHH
Confidence 457 999999998843 44455555543 2347999999999987664 467643 2332221211100
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
..... ...+|.|+- |+|.. ..+..++++|++||++|..
T Consensus 229 ~~~~~----g~g~D~vid---~~g~~-------------------------~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 229 MDITD----GNGVDVFLE---FSGAP-------------------------KALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp HHHTT----TSCEEEEEE---CSCCH-------------------------HHHHHHHHHEEEEEEEEEC
T ss_pred HHHcC----CCCCCEEEE---CCCCH-------------------------HHHHHHHHHHhcCCEEEEE
Confidence 00001 125888874 33321 3477889999999998853
No 343
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=90.85 E-value=0.15 Score=52.41 Aligned_cols=90 Identities=12% Similarity=0.100 Sum_probs=57.2
Q ss_pred cCCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccc
Q psy17365 173 LDVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~ 251 (646)
..+++|++||=.+||+ |..++|+|..++ . .|++.+ +++|++.++ .+|...+. + |...+
T Consensus 138 ~~~~~g~~VlV~GaG~vG~~a~qlak~~G--------a-~Vi~~~-~~~~~~~~~----~lGa~~v~--~-d~~~v---- 196 (315)
T 3goh_A 138 IPLTKQREVLIVGFGAVNNLLTQMLNNAG--------Y-VVDLVS-ASLSQALAA----KRGVRHLY--R-EPSQV---- 196 (315)
T ss_dssp SCCCSCCEEEEECCSHHHHHHHHHHHHHT--------C-EEEEEC-SSCCHHHHH----HHTEEEEE--S-SGGGC----
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC--------C-EEEEEE-ChhhHHHHH----HcCCCEEE--c-CHHHh----
Confidence 4678999999988854 566667776652 3 899999 888887764 47765332 3 31111
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
...+|.|+ | |+|... +..++++|++||++|..
T Consensus 197 ---------~~g~Dvv~-d--~~g~~~--------------------------~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 197 ---------TQKYFAIF-D--AVNSQN--------------------------AAALVPSLKANGHIICI 228 (315)
T ss_dssp ---------CSCEEEEE-C--C---------------------------------TTGGGEEEEEEEEEE
T ss_pred ---------CCCccEEE-E--CCCchh--------------------------HHHHHHHhcCCCEEEEE
Confidence 24689776 4 444321 23457889999999854
No 344
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=90.78 E-value=0.48 Score=49.18 Aligned_cols=99 Identities=12% Similarity=0.064 Sum_probs=60.6
Q ss_pred CCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccc
Q psy17365 174 DVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 174 d~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~ 252 (646)
.+++|++||-.+||+ |..++++|..+ ...|++.|.++.+++.++ .+|...+ +......+.....
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~---------Ga~Vi~~~~~~~~~~~~~----~lGa~~~--~d~~~~~~~~~~~ 225 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAM---------GLNVVAVDIGDEKLELAK----ELGADLV--VNPLKEDAAKFMK 225 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHT---------TCEEEEECSCHHHHHHHH----HTTCSEE--ECTTTSCHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc---------CCEEEEEeCCHHHHHHHH----HCCCCEE--ecCCCccHHHHHH
Confidence 688999999998853 44555555543 238999999999988664 4676432 2221111110000
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
. . ...+|.|+- |+|.. ..+..++++|++||++|..
T Consensus 226 ---~--~-~~~~d~vid---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 226 ---E--K-VGGVHAAVV---TAVSK-------------------------PAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp ---H--H-HSSEEEEEE---SSCCH-------------------------HHHHHHHHHEEEEEEEEEC
T ss_pred ---H--H-hCCCCEEEE---CCCCH-------------------------HHHHHHHHHhhcCCEEEEe
Confidence 0 0 025887764 33321 2477889999999998853
No 345
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=90.59 E-value=0.58 Score=48.44 Aligned_cols=103 Identities=12% Similarity=0.061 Sum_probs=62.7
Q ss_pred cCCCCCCeEEEEcCCCch-HHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccc
Q psy17365 173 LDVQTHHKVLDMCAAPGS-KTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGg-KT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~ 251 (646)
..++||++||=.+||+++ .++++|..+ ....|+++|.+++|++.+ +.+|...+ ++.....+....
T Consensus 159 ~~~~~g~~VlV~GaG~~g~~a~~~a~~~--------~g~~Vi~~~~~~~r~~~~----~~~Ga~~~--i~~~~~~~~~~v 224 (348)
T 4eez_A 159 SGVKPGDWQVIFGAGGLGNLAIQYAKNV--------FGAKVIAVDINQDKLNLA----KKIGADVT--INSGDVNPVDEI 224 (348)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHT--------SCCEEEEEESCHHHHHHH----HHTTCSEE--EEC-CCCHHHHH
T ss_pred cCCCCCCEEEEEcCCCccHHHHHHHHHh--------CCCEEEEEECcHHHhhhh----hhcCCeEE--EeCCCCCHHHHh
Confidence 367899999999988754 444555443 356899999999997654 45676533 222221211100
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
....+ ...+|.++.++ +.+ ..+..++++|++||+++..
T Consensus 225 ~~~t~----g~g~d~~~~~~---~~~-------------------------~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 225 KKITG----GLGVQSAIVCA---VAR-------------------------IAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp HHHTT----SSCEEEEEECC---SCH-------------------------HHHHHHHHTEEEEEEEEEC
T ss_pred hhhcC----CCCceEEEEec---cCc-------------------------chhheeheeecCCceEEEE
Confidence 00001 13467777643 222 3578889999999998854
No 346
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=90.48 E-value=0.21 Score=52.04 Aligned_cols=99 Identities=13% Similarity=0.079 Sum_probs=61.8
Q ss_pred CCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCC-CCCcccc
Q psy17365 174 DVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDA-SVMPNVL 251 (646)
Q Consensus 174 d~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da-~~~p~~~ 251 (646)
++ +|++||-.+||+ |..++|+|..+. +...|++.|.+++|++.++ .+|...+ ++.+. ..+.. .
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~-------~Ga~Vi~~~~~~~~~~~~~----~lGa~~v--i~~~~~~~~~~-~ 232 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALM-------KNITIVGISRSKKHRDFAL----ELGADYV--SEMKDAESLIN-K 232 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHC-------TTCEEEEECSCHHHHHHHH----HHTCSEE--ECHHHHHHHHH-H
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhc-------CCCEEEEEeCCHHHHHHHH----HhCCCEE--eccccchHHHH-H
Confidence 67 999999999864 556667776651 1237999999999987764 4676533 22111 11100 0
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
. .+ ...||.|+- |+|.. ..+..++++|++||++|..
T Consensus 233 ~--~~----g~g~D~vid---~~g~~-------------------------~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 233 L--TD----GLGASIAID---LVGTE-------------------------ETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp H--HT----TCCEEEEEE---SSCCH-------------------------HHHHHHHHHEEEEEEEEEC
T ss_pred h--hc----CCCccEEEE---CCCCh-------------------------HHHHHHHHHhhcCCEEEEe
Confidence 0 01 125898874 33321 2577889999999998853
No 347
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=90.46 E-value=0.59 Score=57.54 Aligned_cols=89 Identities=15% Similarity=0.198 Sum_probs=57.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCC-cEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccc----c
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPS-GLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVL----Y 252 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~-G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~----~ 252 (646)
..+|||+|||.||.+.-+-.+ +- -.|+|+|+++..++..+.| .++..+.+.|...+.... .
T Consensus 851 ~l~viDLFsG~GGlslGfe~A---------G~~~vv~avEid~~A~~ty~~N-----~p~~~~~~~DI~~l~~~~~~gdi 916 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQA---------GISETLWAIEMWDPAAQAFRLN-----NPGTTVFTEDCNVLLKLVMAGEV 916 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHT---------TSEEEEEEECCSHHHHHHHHHH-----CTTSEEECSCHHHHHHHHTTTCS
T ss_pred CceEEecccCccHHHHHHHHC---------CCCceEEEEECCHHHHHHHHHh-----CCCCcEeeccHHHHhHhhhccch
Confidence 457999999999999876432 11 2588999999999988877 344456666654321100 0
Q ss_pred cCCCCC--CCCCCCCeeecCCCCCCCcccc
Q psy17365 253 TDADGN--KVPMKFDRVLCDVPCTGDGTMR 280 (646)
Q Consensus 253 ~~~~g~--~~~~~FD~IL~D~PCSG~G~lr 280 (646)
....+. .....+|+|+.-+||-+.-...
T Consensus 917 ~~~~~~~lp~~~~vDvl~GGpPCQ~FS~ag 946 (1330)
T 3av4_A 917 TNSLGQRLPQKGDVEMLCGGPPCQGFSGMN 946 (1330)
T ss_dssp BCSSCCBCCCTTTCSEEEECCCCTTTCSSS
T ss_pred hhhhhhhccccCccceEEecCCCccccccc
Confidence 000010 1124689999999999876543
No 348
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=89.87 E-value=0.29 Score=50.98 Aligned_cols=73 Identities=8% Similarity=-0.003 Sum_probs=47.4
Q ss_pred CCeEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhcc
Q psy17365 235 PCAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAV 314 (646)
Q Consensus 235 ~ni~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKp 314 (646)
....++++|+....... ....||.|++|||...... ..|..............+|..+.++||+
T Consensus 13 ~~~~ii~gD~~~~l~~l--------~~~svDlI~tDPPY~~~~~--------~~y~~~~~~~~~~~l~~~l~~~~rvLk~ 76 (323)
T 1boo_A 13 SNGSMYIGDSLELLESF--------PEESISLVMTSPPFALQRK--------KEYGNLEQHEYVDWFLSFAKVVNKKLKP 76 (323)
T ss_dssp SSEEEEESCHHHHGGGS--------CSSCEEEEEECCCCSSSCS--------CSSCSCHHHHHHHHHHHHHHHHHHHEEE
T ss_pred CCceEEeCcHHHHHhhC--------CCCCeeEEEECCCCCCCcc--------cccCCcCHHHHHHHHHHHHHHHHHHCcC
Confidence 34678888886532211 1257999999999854321 0222223344455567889999999999
Q ss_pred CCeEEEEcC
Q psy17365 315 GGKIAYSTC 323 (646)
Q Consensus 315 GG~LVYSTC 323 (646)
||.|+....
T Consensus 77 ~G~i~i~~~ 85 (323)
T 1boo_A 77 DGSFVVDFG 85 (323)
T ss_dssp EEEEEEEEC
T ss_pred CcEEEEEEC
Confidence 999987644
No 349
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=89.33 E-value=0.37 Score=51.25 Aligned_cols=137 Identities=12% Similarity=0.126 Sum_probs=73.3
Q ss_pred CeEEEEcCCCchHHHHHHHH----hhhc---CCC-CCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEecCCCCCcc
Q psy17365 179 HKVLDMCAAPGSKTAQIIEM----IHAA---DSN-PVPSGLVVANDVDNNRCYMLVHQAKRLNS-PCAIITNHDASVMPN 249 (646)
Q Consensus 179 ~~VLDmCAaPGgKT~~lae~----l~~~---~~~-~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~-~ni~v~~~Da~~~p~ 249 (646)
.+|+|+||++|.-|..+++. +... .+. ..|.-.|+.||.-..-...|-+.+..+.. .+..++.+.+..|-.
T Consensus 53 ~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy~ 132 (359)
T 1m6e_X 53 LAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYG 132 (359)
T ss_dssp ECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSS
T ss_pred eEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhhh
Confidence 57999999999988765433 2110 011 23677899999887776666554432110 022444444444321
Q ss_pred ccccCCCCCCCCCCCCeeec--------CCCCCCCcccccCccccccC-Ccchh-----hhhHHHHHHHHHHHHHhhccC
Q psy17365 250 VLYTDADGNKVPMKFDRVLC--------DVPCTGDGTMRKNPDIWTKW-TPSNG-----NNLHGIQYRIVKRGVEMLAVG 315 (646)
Q Consensus 250 ~~~~~~~g~~~~~~FD~IL~--------D~PCSG~G~lrk~pd~~~~w-~~~~~-----~~l~~lQ~~IL~~A~~lLKpG 315 (646)
.. .....||.|.+ ++|+.-.. .| -.++-.. ++..+ .....--..+|+.-.+-|+||
T Consensus 133 rl-------fp~~S~d~v~Ss~aLHWls~~p~~l~~--nk-g~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pG 202 (359)
T 1m6e_X 133 RL-------FPRNTLHFIHSSYSLMWLSQVPIGIES--NK-GNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPG 202 (359)
T ss_dssp CC-------SCTTCBSCEEEESCTTBCSSCCSCCCC--CT-TTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTT
T ss_pred cc-------CCCCceEEEEehhhhhhcccCchhhhc--cC-CceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 11 11356888754 45543211 00 0010000 11112 223333345688888999999
Q ss_pred CeEEEEcCCC
Q psy17365 316 GKIAYSTCSL 325 (646)
Q Consensus 316 G~LVYSTCSl 325 (646)
|+||.++..-
T Consensus 203 G~mvl~~~gr 212 (359)
T 1m6e_X 203 GRMVLTILGR 212 (359)
T ss_dssp CEEEEEEEEC
T ss_pred ceEEEEEecC
Confidence 9999887654
No 350
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=88.96 E-value=0.64 Score=48.23 Aligned_cols=101 Identities=22% Similarity=0.217 Sum_probs=61.2
Q ss_pred cCCCCCCeEEEEcC--CCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccc
Q psy17365 173 LDVQTHHKVLDMCA--APGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNV 250 (646)
Q Consensus 173 Ld~~pg~~VLDmCA--aPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~ 250 (646)
.++++|++||-.+| |-|..+++++... ...|++.|.++.+++.++ .+|...+ +..+...+...
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~---------G~~Vi~~~~~~~~~~~~~----~~ga~~~--~d~~~~~~~~~ 226 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLF---------GARVIATAGSEDKLRRAK----ALGADET--VNYTHPDWPKE 226 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHT---------TCEEEEEESSHHHHHHHH----HHTCSEE--EETTSTTHHHH
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHC---------CCEEEEEeCCHHHHHHHH----hcCCCEE--EcCCcccHHHH
Confidence 36789999999988 3455566666553 238999999999988764 3575432 22221111110
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
...... ...+|.|+- |+| +. .+..++++|++||++|..
T Consensus 227 ~~~~~~----~~~~d~vi~---~~g-~~-------------------------~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 227 VRRLTG----GKGADKVVD---HTG-AL-------------------------YFEGVIKATANGGRIAIA 264 (343)
T ss_dssp HHHHTT----TTCEEEEEE---SSC-SS-------------------------SHHHHHHHEEEEEEEEES
T ss_pred HHHHhC----CCCceEEEE---CCC-HH-------------------------HHHHHHHhhccCCEEEEE
Confidence 000000 135898875 344 21 256788999999998853
No 351
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=88.82 E-value=0.61 Score=48.34 Aligned_cols=51 Identities=20% Similarity=0.237 Sum_probs=38.5
Q ss_pred cCCCCCCeEEEEcCC--CchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC
Q psy17365 173 LDVQTHHKVLDMCAA--PGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC 236 (646)
Q Consensus 173 Ld~~pg~~VLDmCAa--PGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n 236 (646)
+++++|++||-.+|| -|..++++|..++ ..|++.|.+.++++.+++ +|...
T Consensus 140 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G---------a~Vi~~~~~~~~~~~~~~----lga~~ 192 (340)
T 3gms_A 140 LNLQRNDVLLVNACGSAIGHLFAQLSQILN---------FRLIAVTRNNKHTEELLR----LGAAY 192 (340)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHT---------CEEEEEESSSTTHHHHHH----HTCSE
T ss_pred cccCCCCEEEEeCCccHHHHHHHHHHHHcC---------CEEEEEeCCHHHHHHHHh----CCCcE
Confidence 478899999998876 4666777776642 389999999998877654 67653
No 352
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=88.24 E-value=0.38 Score=50.09 Aligned_cols=95 Identities=18% Similarity=0.174 Sum_probs=56.4
Q ss_pred CCCeEEEEc-CC-CchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 177 THHKVLDMC-AA-PGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 177 pg~~VLDmC-Aa-PGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
+|++||=.+ +| -|..++++|..+ ...|++.+.++++++.+++ +|...+ +..+. .+..... .
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~---------Ga~Vi~~~~~~~~~~~~~~----lGa~~v--i~~~~-~~~~~~~-~ 212 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY---------GLRVITTASRNETIEWTKK----MGADIV--LNHKE-SLLNQFK-T 212 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT---------TCEEEEECCSHHHHHHHHH----HTCSEE--ECTTS-CHHHHHH-H
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc---------CCEEEEEeCCHHHHHHHHh----cCCcEE--EECCc-cHHHHHH-H
Confidence 899999763 22 244455555543 2389999999999887654 676533 22221 1111000 0
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEE
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAY 320 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVY 320 (646)
.. ...||.|+- |+|.. ..+..++++|++||++|.
T Consensus 213 ~~----~~g~Dvv~d---~~g~~-------------------------~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 213 QG----IELVDYVFC---TFNTD-------------------------MYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp HT----CCCEEEEEE---SSCHH-------------------------HHHHHHHHHEEEEEEEEE
T ss_pred hC----CCCccEEEE---CCCch-------------------------HHHHHHHHHhccCCEEEE
Confidence 01 135897774 44422 346788999999999973
No 353
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=88.04 E-value=0.42 Score=49.99 Aligned_cols=99 Identities=12% Similarity=0.039 Sum_probs=59.0
Q ss_pred CCCCC------CeEEEEcCCCchHHHHH-HHHh-hhcCCCCCCCcEEEEEcCCHH---HHHHHHHHHHHcCCCCeEEEec
Q psy17365 174 DVQTH------HKVLDMCAAPGSKTAQI-IEMI-HAADSNPVPSGLVVANDVDNN---RCYMLVHQAKRLNSPCAIITNH 242 (646)
Q Consensus 174 d~~pg------~~VLDmCAaPGgKT~~l-ae~l-~~~~~~~~~~G~VvA~Dis~~---Rl~~L~~n~~rlg~~ni~v~~~ 242 (646)
++++| ++||=.+| |+....+ +++. ... +...|++.|.+++ |++.++ .+|...+ +.
T Consensus 163 ~~~~g~~~~~~~~VlV~Ga--G~vG~~a~iqla~k~~-----Ga~~Vi~~~~~~~~~~~~~~~~----~lGa~~v---~~ 228 (357)
T 2b5w_A 163 YASRSAFDWDPSSAFVLGN--GSLGLLTLAMLKVDDK-----GYENLYCLGRRDRPDPTIDIIE----ELDATYV---DS 228 (357)
T ss_dssp HHTTTTSCCCCCEEEEECC--SHHHHHHHHHHHHCTT-----CCCEEEEEECCCSSCHHHHHHH----HTTCEEE---ET
T ss_pred CCCCCcccCCCCEEEEECC--CHHHHHHHHHHHHHHc-----CCcEEEEEeCCcccHHHHHHHH----HcCCccc---CC
Confidence 57899 99999997 5544444 4443 210 2335999999988 877653 5776433 22
Q ss_pred CCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 243 DASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 243 Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
+...+..+.. . ...||.|+- |+|.. ..+..++++|++||++|..
T Consensus 229 ~~~~~~~i~~--~-----~gg~Dvvid---~~g~~-------------------------~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 229 RQTPVEDVPD--V-----YEQMDFIYE---ATGFP-------------------------KHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp TTSCGGGHHH--H-----SCCEEEEEE---CSCCH-------------------------HHHHHHHHHEEEEEEEEEC
T ss_pred CccCHHHHHH--h-----CCCCCEEEE---CCCCh-------------------------HHHHHHHHHHhcCCEEEEE
Confidence 2222211100 0 125887763 33321 2467889999999998854
No 354
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=87.68 E-value=0.85 Score=47.07 Aligned_cols=100 Identities=14% Similarity=0.130 Sum_probs=58.6
Q ss_pred cCCCCCCeEEEEcCC--CchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccc
Q psy17365 173 LDVQTHHKVLDMCAA--PGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNV 250 (646)
Q Consensus 173 Ld~~pg~~VLDmCAa--PGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~ 250 (646)
..+++|++||=.+|+ -|..++++|... ...|++.+.+++|++.++ .+|... ++..+...+...
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~---------Ga~Vi~~~~~~~~~~~~~----~~ga~~--~~~~~~~~~~~~ 208 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLKMK---------GAHTIAVASTDEKLKIAK----EYGAEY--LINASKEDILRQ 208 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHT---------TCEEEEEESSHHHHHHHH----HTTCSE--EEETTTSCHHHH
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHC---------CCEEEEEeCCHHHHHHHH----HcCCcE--EEeCCCchHHHH
Confidence 367899999987742 233444444442 248999999999987653 467543 222222221110
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEE
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAY 320 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVY 320 (646)
...... ...+|.|+- |+|.. .+..++++|++||++|.
T Consensus 209 ~~~~~~----~~g~D~vid---~~g~~--------------------------~~~~~~~~l~~~G~iv~ 245 (334)
T 3qwb_A 209 VLKFTN----GKGVDASFD---SVGKD--------------------------TFEISLAALKRKGVFVS 245 (334)
T ss_dssp HHHHTT----TSCEEEEEE---CCGGG--------------------------GHHHHHHHEEEEEEEEE
T ss_pred HHHHhC----CCCceEEEE---CCChH--------------------------HHHHHHHHhccCCEEEE
Confidence 000001 135898774 33321 26678899999999985
No 355
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=87.26 E-value=0.55 Score=48.93 Aligned_cols=49 Identities=14% Similarity=0.077 Sum_probs=35.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCH---HHHHHHHHHHHHcC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDN---NRCYMLVHQAKRLN 233 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~---~Rl~~L~~n~~rlg 233 (646)
..+|+.|||-+||+|+....+. .+ .-..+++|+++ .-++.+++++++.|
T Consensus 240 ~~~~~~vlDpF~GsGtt~~aa~-~~---------~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTARVAI-QE---------GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp SCTTCEEEETTCTTCHHHHHHH-HH---------TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCCEEEecCCCCCHHHHHHH-Hc---------CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 4689999999999997554443 33 23789999999 88888888877654
No 356
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=87.04 E-value=0.92 Score=46.65 Aligned_cols=101 Identities=13% Similarity=0.056 Sum_probs=59.6
Q ss_pred cCCCCCCeEEEEcC--CCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccc
Q psy17365 173 LDVQTHHKVLDMCA--APGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNV 250 (646)
Q Consensus 173 Ld~~pg~~VLDmCA--aPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~ 250 (646)
.++++|++||=.+| +-|..++++|... ...|++.+.++++++.++ .+|... +++.+...+...
T Consensus 136 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~---------Ga~Vi~~~~~~~~~~~~~----~~Ga~~--~~~~~~~~~~~~ 200 (325)
T 3jyn_A 136 YQVKPGEIILFHAAAGGVGSLACQWAKAL---------GAKLIGTVSSPEKAAHAK----ALGAWE--TIDYSHEDVAKR 200 (325)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHH---------TCEEEEEESSHHHHHHHH----HHTCSE--EEETTTSCHHHH
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHC---------CCEEEEEeCCHHHHHHHH----HcCCCE--EEeCCCccHHHH
Confidence 46889999997663 2344455555543 238999999999988765 467543 223222221110
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
...... ...+|.|+- |+|.. .+..++++|++||++|..
T Consensus 201 ~~~~~~----~~g~Dvvid---~~g~~--------------------------~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 201 VLELTD----GKKCPVVYD---GVGQD--------------------------TWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp HHHHTT----TCCEEEEEE---SSCGG--------------------------GHHHHHTTEEEEEEEEEC
T ss_pred HHHHhC----CCCceEEEE---CCChH--------------------------HHHHHHHHhcCCCEEEEE
Confidence 000001 135887764 44421 366788999999999853
No 357
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=86.78 E-value=1.5 Score=45.67 Aligned_cols=102 Identities=18% Similarity=0.169 Sum_probs=58.4
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~ 252 (646)
..+++|++||=.+ |.|+....+++++.. -...|++.|.++++++.++ .+|...+ +..+...+.....
T Consensus 163 ~~~~~g~~VlV~G-g~g~iG~~~~~~a~~------~Ga~Vi~~~~~~~~~~~~~----~lGa~~~--~~~~~~~~~~~~~ 229 (353)
T 4dup_A 163 AGLTEGESVLIHG-GTSGIGTTAIQLARA------FGAEVYATAGSTGKCEACE----RLGAKRG--INYRSEDFAAVIK 229 (353)
T ss_dssp TCCCTTCEEEESS-TTSHHHHHHHHHHHH------TTCEEEEEESSHHHHHHHH----HHTCSEE--EETTTSCHHHHHH
T ss_pred cCCCCCCEEEEEc-CCCHHHHHHHHHHHH------cCCEEEEEeCCHHHHHHHH----hcCCCEE--EeCCchHHHHHHH
Confidence 4678999999653 344444444333321 1237999999999988765 3676532 2222222111000
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
... ...+|.|+- |+|.. .+..++++|++||++|..
T Consensus 230 -~~~----~~g~Dvvid---~~g~~--------------------------~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 230 -AET----GQGVDIILD---MIGAA--------------------------YFERNIASLAKDGCLSII 264 (353)
T ss_dssp -HHH----SSCEEEEEE---SCCGG--------------------------GHHHHHHTEEEEEEEEEC
T ss_pred -HHh----CCCceEEEE---CCCHH--------------------------HHHHHHHHhccCCEEEEE
Confidence 000 135897774 44421 256788999999998854
No 358
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=86.38 E-value=0.47 Score=49.35 Aligned_cols=61 Identities=8% Similarity=-0.027 Sum_probs=43.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCC
Q psy17365 175 VQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASV 246 (646)
Q Consensus 175 ~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~ 246 (646)
..+|+.|||-+||+|+.. +.|..+ .-..+++|+++..+..++.++++.+.. ...++.|+..
T Consensus 250 ~~~~~~VlDpF~GsGtt~-~aa~~~---------gr~~ig~e~~~~~~~~~~~r~~~~~~~-~~~~~~~~~~ 310 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTG-LVAERE---------SRKWISFEMKPEYVAASAFRFLDNNIS-EEKITDIYNR 310 (323)
T ss_dssp CCTTCEEEETTCTTCHHH-HHHHHT---------TCEEEEEESCHHHHHHHHGGGSCSCSC-HHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCHHH-HHHHHc---------CCCEEEEeCCHHHHHHHHHHHHhcccc-hHHHHHHHHH
Confidence 468999999999999744 444443 247899999999999988887766543 3333444443
No 359
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=86.30 E-value=0.86 Score=47.35 Aligned_cols=99 Identities=15% Similarity=0.120 Sum_probs=59.1
Q ss_pred cCCCCCCeEEEEcC--CCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccc
Q psy17365 173 LDVQTHHKVLDMCA--APGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNV 250 (646)
Q Consensus 173 Ld~~pg~~VLDmCA--aPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~ 250 (646)
..+++|++||=.+| +-|..++++|..+ ...|++.+.+.++++.+++ +|...+ +..+ ..+...
T Consensus 155 ~~~~~g~~VlV~Gasg~iG~~~~~~a~~~---------Ga~Vi~~~~~~~~~~~~~~----~ga~~v--~~~~-~~~~~~ 218 (342)
T 4eye_A 155 GQLRAGETVLVLGAAGGIGTAAIQIAKGM---------GAKVIAVVNRTAATEFVKS----VGADIV--LPLE-EGWAKA 218 (342)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHT---------TCEEEEEESSGGGHHHHHH----HTCSEE--EESS-TTHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc---------CCEEEEEeCCHHHHHHHHh----cCCcEE--ecCc-hhHHHH
Confidence 46789999997765 2344555555543 2389999999998876653 676533 3333 222111
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEE
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAY 320 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVY 320 (646)
...... ...+|.|+- |+|.. .+..++++|++||++|.
T Consensus 219 v~~~~~----~~g~Dvvid---~~g~~--------------------------~~~~~~~~l~~~G~iv~ 255 (342)
T 4eye_A 219 VREATG----GAGVDMVVD---PIGGP--------------------------AFDDAVRTLASEGRLLV 255 (342)
T ss_dssp HHHHTT----TSCEEEEEE---SCC----------------------------CHHHHHHTEEEEEEEEE
T ss_pred HHHHhC----CCCceEEEE---CCchh--------------------------HHHHHHHhhcCCCEEEE
Confidence 000001 135898774 44421 25678899999999984
No 360
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=86.00 E-value=1.2 Score=42.03 Aligned_cols=52 Identities=15% Similarity=0.158 Sum_probs=33.0
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP 235 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ 235 (646)
.++++|++||-.+|+ |+....+++.+... ...|++.|.++++++.++ .+|..
T Consensus 34 ~~~~~g~~vlV~Ga~-ggiG~~~~~~~~~~------G~~V~~~~~~~~~~~~~~----~~g~~ 85 (198)
T 1pqw_A 34 GRLSPGERVLIHSAT-GGVGMAAVSIAKMI------GARIYTTAGSDAKREMLS----RLGVE 85 (198)
T ss_dssp SCCCTTCEEEETTTT-SHHHHHHHHHHHHH------TCEEEEEESSHHHHHHHH----TTCCS
T ss_pred hCCCCCCEEEEeeCC-ChHHHHHHHHHHHc------CCEEEEEeCCHHHHHHHH----HcCCC
Confidence 467899999988753 44444444433211 247999999998876553 35653
No 361
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=85.92 E-value=0.5 Score=49.05 Aligned_cols=101 Identities=18% Similarity=0.194 Sum_probs=58.9
Q ss_pred ccCCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccc
Q psy17365 172 LLDVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNV 250 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~ 250 (646)
.+++ +|++||-.+||+ |..++++|..+ +.+.|++.|.++++++.+++ + .. .++..+...+...
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~--------Ga~~Vi~~~~~~~~~~~~~~----l-a~--~v~~~~~~~~~~~ 223 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRAS--------GAGPILVSDPNPYRLAFARP----Y-AD--RLVNPLEEDLLEV 223 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHT--------TCCSEEEECSCHHHHGGGTT----T-CS--EEECTTTSCHHHH
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHc--------CCCEEEEECCCHHHHHHHHH----h-HH--hccCcCccCHHHH
Confidence 3467 999999999843 44555555543 23479999999998776543 3 22 2233221111110
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
.. .. . ...+|.|+- |+|. ...+..++++|++||++|..
T Consensus 224 ~~-~~---~-~~g~D~vid---~~g~-------------------------~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 224 VR-RV---T-GSGVEVLLE---FSGN-------------------------EAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp HH-HH---H-SSCEEEEEE---CSCC-------------------------HHHHHHHHHHEEEEEEEEEC
T ss_pred HH-Hh---c-CCCCCEEEE---CCCC-------------------------HHHHHHHHHHHhcCCEEEEE
Confidence 00 00 0 135888874 3332 13477889999999998854
No 362
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=85.11 E-value=0.46 Score=47.69 Aligned_cols=71 Identities=13% Similarity=0.238 Sum_probs=43.2
Q ss_pred EEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCe
Q psy17365 238 IITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGK 317 (646)
Q Consensus 238 ~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~ 317 (646)
.++++|+..+.... ...+||.|++|||...... . +..+. ........-..+|..+.++|++||.
T Consensus 6 ~l~~gD~~~~l~~l--------~~~~vdlI~~DPPY~~~~~---~---~d~~~--~~~~y~~~~~~~l~~~~~~Lk~~g~ 69 (260)
T 1g60_A 6 KIHQMNCFDFLDQV--------ENKSVQLAVIDPPYNLSKA---D---WDSFD--SHNEFLAFTYRWIDKVLDKLDKDGS 69 (260)
T ss_dssp SEEECCHHHHHHHS--------CTTCEEEEEECCCCSSCSS---G---GGCCS--SHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred eEEechHHHHHHhc--------cccccCEEEECCCCCCCcc---c---ccccC--CHHHHHHHHHHHHHHHHHHhcCCeE
Confidence 46678875432211 1247999999999853210 0 11111 2233334556788888999999999
Q ss_pred EEEEcCC
Q psy17365 318 IAYSTCS 324 (646)
Q Consensus 318 LVYSTCS 324 (646)
|+.+.|.
T Consensus 70 i~v~~~d 76 (260)
T 1g60_A 70 LYIFNTP 76 (260)
T ss_dssp EEEEECH
T ss_pred EEEEcCc
Confidence 8877554
No 363
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=85.09 E-value=1.3 Score=45.72 Aligned_cols=100 Identities=21% Similarity=0.189 Sum_probs=59.1
Q ss_pred cCCCCCCeEEEEcCC--CchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccc
Q psy17365 173 LDVQTHHKVLDMCAA--PGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNV 250 (646)
Q Consensus 173 Ld~~pg~~VLDmCAa--PGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~ 250 (646)
.++++|++||-.+|+ -|.-+++++... ...|++.|.++.+++.+. +.+|...+ +......+...
T Consensus 145 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~---------Ga~Vi~~~~~~~~~~~~~---~~~g~~~~--~~~~~~~~~~~ 210 (336)
T 4b7c_A 145 GQPKNGETVVISGAAGAVGSVAGQIARLK---------GCRVVGIAGGAEKCRFLV---EELGFDGA--IDYKNEDLAAG 210 (336)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHT---------TCEEEEEESSHHHHHHHH---HTTCCSEE--EETTTSCHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHC---------CCEEEEEeCCHHHHHHHH---HHcCCCEE--EECCCHHHHHH
Confidence 468899999977762 344444444432 238999999999887662 34676432 22221221110
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEE
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAY 320 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVY 320 (646)
.. ... ...+|.|+- |+|. ..+..++++|++||++|.
T Consensus 211 ~~-~~~----~~~~d~vi~---~~g~--------------------------~~~~~~~~~l~~~G~iv~ 246 (336)
T 4b7c_A 211 LK-REC----PKGIDVFFD---NVGG--------------------------EILDTVLTRIAFKARIVL 246 (336)
T ss_dssp HH-HHC----TTCEEEEEE---SSCH--------------------------HHHHHHHTTEEEEEEEEE
T ss_pred HH-Hhc----CCCceEEEE---CCCc--------------------------chHHHHHHHHhhCCEEEE
Confidence 00 000 135887764 3331 247788999999999985
No 364
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=84.81 E-value=1.2 Score=45.96 Aligned_cols=100 Identities=19% Similarity=0.214 Sum_probs=58.0
Q ss_pred cCCCCCCeEEEEcC--CCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEec-CCCCCcc
Q psy17365 173 LDVQTHHKVLDMCA--APGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNH-DASVMPN 249 (646)
Q Consensus 173 Ld~~pg~~VLDmCA--aPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~-Da~~~p~ 249 (646)
.++++|++||-.+| |-|..+++++... ...|++.|.++.+++.+++ .+|...+ +.. +...+..
T Consensus 151 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~---------G~~V~~~~~~~~~~~~~~~---~~g~~~~--~d~~~~~~~~~ 216 (345)
T 2j3h_A 151 CSPKEGETVYVSAASGAVGQLVGQLAKMM---------GCYVVGSAGSKEKVDLLKT---KFGFDDA--FNYKEESDLTA 216 (345)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHT---------TCEEEEEESSHHHHHHHHH---TSCCSEE--EETTSCSCSHH
T ss_pred hCCCCCCEEEEECCCcHHHHHHHHHHHHC---------CCEEEEEeCCHHHHHHHHH---HcCCceE--EecCCHHHHHH
Confidence 46889999998876 2334444444432 2489999999998876642 4676432 221 1111211
Q ss_pred ccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEE
Q psy17365 250 VLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAY 320 (646)
Q Consensus 250 ~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVY 320 (646)
... ... ...+|.|+.. +|. ..+..++++|++||++|.
T Consensus 217 ~~~-~~~----~~~~d~vi~~---~g~--------------------------~~~~~~~~~l~~~G~~v~ 253 (345)
T 2j3h_A 217 ALK-RCF----PNGIDIYFEN---VGG--------------------------KMLDAVLVNMNMHGRIAV 253 (345)
T ss_dssp HHH-HHC----TTCEEEEEES---SCH--------------------------HHHHHHHTTEEEEEEEEE
T ss_pred HHH-HHh----CCCCcEEEEC---CCH--------------------------HHHHHHHHHHhcCCEEEE
Confidence 100 000 1358877742 221 247788999999999985
No 365
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=84.73 E-value=0.56 Score=49.09 Aligned_cols=97 Identities=10% Similarity=0.054 Sum_probs=57.9
Q ss_pred CCC-CCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccc
Q psy17365 174 DVQ-THHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 174 d~~-pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~ 251 (646)
.++ +|++||=.+||+ |..++|+|..+ + ..|++.|.+++|++.+. +++|...+. ..+-.. ...
T Consensus 176 ~~~~~g~~VlV~GaG~vG~~a~qlak~~--------G-a~Vi~~~~~~~~~~~~~---~~lGa~~vi--~~~~~~--~~~ 239 (357)
T 2cf5_A 176 GLKQPGLRGGILGLGGVGHMGVKIAKAM--------G-HHVTVISSSNKKREEAL---QDLGADDYV--IGSDQA--KMS 239 (357)
T ss_dssp STTSTTCEEEEECCSHHHHHHHHHHHHH--------T-CEEEEEESSTTHHHHHH---TTSCCSCEE--ETTCHH--HHH
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHC--------C-CeEEEEeCChHHHHHHH---HHcCCceee--ccccHH--HHH
Confidence 577 999999987643 33455555544 2 37999999998876653 257765432 221100 000
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
. ....+|.|+- |+|.. . .+..++++|++||++|..
T Consensus 240 ~-------~~~g~D~vid---~~g~~------~-------------------~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 240 E-------LADSLDYVID---TVPVH------H-------------------ALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp H-------STTTEEEEEE---CCCSC------C-------------------CSHHHHTTEEEEEEEEEC
T ss_pred H-------hcCCCCEEEE---CCCCh------H-------------------HHHHHHHHhccCCEEEEe
Confidence 0 0125888774 44422 1 145678899999999854
No 366
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=84.12 E-value=0.91 Score=46.65 Aligned_cols=50 Identities=18% Similarity=0.062 Sum_probs=34.3
Q ss_pred CCCCCC-eEEEEcC--CCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC
Q psy17365 174 DVQTHH-KVLDMCA--APGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC 236 (646)
Q Consensus 174 d~~pg~-~VLDmCA--aPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n 236 (646)
++++|+ +||=.+| +-|..++|+|..+ ...|++.+.++++++.++ .+|...
T Consensus 145 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~---------Ga~vi~~~~~~~~~~~~~----~lGa~~ 197 (328)
T 1xa0_A 145 GLTPERGPVLVTGATGGVGSLAVSMLAKR---------GYTVEASTGKAAEHDYLR----VLGAKE 197 (328)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHT---------TCCEEEEESCTTCHHHHH----HTTCSE
T ss_pred CCCCCCceEEEecCCCHHHHHHHHHHHHC---------CCEEEEEECCHHHHHHHH----HcCCcE
Confidence 578886 8988776 3344556666553 236999999988887664 477654
No 367
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=83.47 E-value=1.7 Score=44.73 Aligned_cols=52 Identities=19% Similarity=0.169 Sum_probs=34.0
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP 235 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ 235 (646)
.++++|++||-.+|+ |+....+++++.. ....|++.|.+..+++.+ +.+|..
T Consensus 141 ~~~~~g~~vlV~Ga~-ggiG~~~~~~~~~------~G~~V~~~~~~~~~~~~~----~~~g~~ 192 (333)
T 1v3u_A 141 CGVKGGETVLVSAAA-GAVGSVVGQIAKL------KGCKVVGAAGSDEKIAYL----KQIGFD 192 (333)
T ss_dssp SCCCSSCEEEEESTT-BHHHHHHHHHHHH------TTCEEEEEESSHHHHHHH----HHTTCS
T ss_pred hCCCCCCEEEEecCC-CcHHHHHHHHHHH------CCCEEEEEeCCHHHHHHH----HhcCCc
Confidence 467899999998873 3444444444331 123899999999888765 345653
No 368
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=83.38 E-value=1.6 Score=44.82 Aligned_cols=104 Identities=12% Similarity=0.057 Sum_probs=58.8
Q ss_pred ccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccc
Q psy17365 172 LLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 172 ~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~ 251 (646)
..++++|++||-.+| .|+....+++++... ...|++.|.++.+++.+++ +|... ++..+...+....
T Consensus 135 ~~~~~~g~~vlV~Ga-~ggiG~~~~~~a~~~------G~~V~~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~ 201 (327)
T 1qor_A 135 TYEIKPDEQFLFHAA-AGGVGLIACQWAKAL------GAKLIGTVGTAQKAQSALK----AGAWQ--VINYREEDLVERL 201 (327)
T ss_dssp TSCCCTTCEEEESST-TBHHHHHHHHHHHHH------TCEEEEEESSHHHHHHHHH----HTCSE--EEETTTSCHHHHH
T ss_pred hhCCCCCCEEEEECC-CCHHHHHHHHHHHHc------CCEEEEEeCCHHHHHHHHH----cCCCE--EEECCCccHHHHH
Confidence 346889999998774 344444444443211 2389999999998877654 56542 2222111111100
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
..... ...+|.|+. |+| + ..+..++++|++||++|..
T Consensus 202 ~~~~~----~~~~D~vi~---~~g-~-------------------------~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 202 KEITG----GKKVRVVYD---SVG-R-------------------------DTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp HHHTT----TCCEEEEEE---CSC-G-------------------------GGHHHHHHTEEEEEEEEEC
T ss_pred HHHhC----CCCceEEEE---CCc-h-------------------------HHHHHHHHHhcCCCEEEEE
Confidence 00000 125888875 334 2 1267788999999998843
No 369
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=83.32 E-value=0.89 Score=47.22 Aligned_cols=101 Identities=13% Similarity=0.066 Sum_probs=58.2
Q ss_pred CCCCCCeEEEEcCC--CchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccc
Q psy17365 174 DVQTHHKVLDMCAA--PGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVL 251 (646)
Q Consensus 174 d~~pg~~VLDmCAa--PGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~ 251 (646)
++++|++||-.+|+ -|..+++++... ...|++.|.++.+++.++ .+|...+ +-..+...+....
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~---------Ga~V~~~~~~~~~~~~~~----~~g~~~~-~d~~~~~~~~~~~ 231 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAM---------GYRVLGIDGGEGKEELFR----SIGGEVF-IDFTKEKDIVGAV 231 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHT---------TCEEEEEECSTTHHHHHH----HTTCCEE-EETTTCSCHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC---------CCcEEEEcCCHHHHHHHH----HcCCceE-EecCccHhHHHHH
Confidence 67899999999873 344444554432 248999999998876553 4665422 1111111111100
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
. .. . ...+|.|+.. +|.. ..+..++++|++||++|..
T Consensus 232 ~-~~---~-~~~~D~vi~~---~g~~-------------------------~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 232 L-KA---T-DGGAHGVINV---SVSE-------------------------AAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp H-HH---H-TSCEEEEEEC---SSCH-------------------------HHHHHHTTSEEEEEEEEEC
T ss_pred H-HH---h-CCCCCEEEEC---CCcH-------------------------HHHHHHHHHHhcCCEEEEE
Confidence 0 00 0 0158887753 2311 3577889999999999854
No 370
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=83.00 E-value=1.3 Score=45.89 Aligned_cols=51 Identities=16% Similarity=0.220 Sum_probs=35.6
Q ss_pred cCCCCCCeEEEEcCC--CchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q psy17365 173 LDVQTHHKVLDMCAA--PGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP 235 (646)
Q Consensus 173 Ld~~pg~~VLDmCAa--PGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ 235 (646)
.++++|++||-.+|| -|..+++++.... ...|++.|.++.+++.++ .+|..
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~--------Ga~Vi~~~~~~~~~~~~~----~~g~~ 218 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVS--------GATIIGVDVREEAVEAAK----RAGAD 218 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHT--------CCEEEEEESSHHHHHHHH----HHTCS
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcC--------CCeEEEEcCCHHHHHHHH----HhCCC
Confidence 368899999999986 3444555555430 237999999999987664 35654
No 371
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=82.78 E-value=1.9 Score=43.61 Aligned_cols=141 Identities=11% Similarity=0.115 Sum_probs=85.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcC-----CH----------------------HHHHHH---H
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDV-----DN----------------------NRCYML---V 226 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Di-----s~----------------------~Rl~~L---~ 226 (646)
|| .|++.+..-|+-+..++.+...-.. ......|++.|. .. ..+..+ .
T Consensus 70 pG-~ivE~GV~rG~S~~~~a~~~~~l~~-~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 70 PG-VIMEFGVRFGRHLGTFAALRGVYEP-YNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp CS-EEEEECCTTCHHHHHHHHHHHHHCT-TCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CC-eEEEEecccCHHHHHHHHHHHHhcc-cCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 55 7999999999988887765321000 013568888882 21 112221 1
Q ss_pred HHHHHcCC--CCeEEEecCCCCC-ccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHH
Q psy17365 227 HQAKRLNS--PCAIITNHDASVM-PNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYR 303 (646)
Q Consensus 227 ~n~~rlg~--~ni~v~~~Da~~~-p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~ 303 (646)
+|.+++|. .+|.++.+++..- |.... . .....||.|.+|+- . ..-...
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~dTL~~~l~---~--~~~~~~dlv~ID~D-~-----------------------Y~~t~~ 198 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVRETVPRYLA---E--NPQTVIALAYFDLD-L-----------------------YEPTKA 198 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHHHHHHHHHH---H--CTTCCEEEEEECCC-C-----------------------HHHHHH
T ss_pred hhhhhcCCCCCcEEEEEecHHHHHHHHHH---h--CCCCceEEEEEcCc-c-----------------------cchHHH
Confidence 22335664 6899999998652 22110 0 01246999999973 0 111235
Q ss_pred HHHHHHHhhccCCeEEEEcCCC--CccccHHHHHHHHHHccCcEEEee
Q psy17365 304 IVKRGVEMLAVGGKIAYSTCSL--NPLEDEAVIQRLIVETQGAVQLVD 349 (646)
Q Consensus 304 IL~~A~~lLKpGG~LVYSTCSl--~p~ENE~VV~~~L~~~~~~~elv~ 349 (646)
.+..++.+|+|||.||+--... .|.+.+| +.+++.+++-.++..+
T Consensus 199 ~le~~~p~l~~GGvIv~DD~~~~~w~G~~~A-~~ef~~~~~~~i~~~p 245 (257)
T 3tos_A 199 VLEAIRPYLTKGSIVAFDELDNPKWPGENIA-MRKVLGLDHAPLRLLP 245 (257)
T ss_dssp HHHHHGGGEEEEEEEEESSTTCTTCTHHHHH-HHHHTCTTSSCCEECT
T ss_pred HHHHHHHHhCCCcEEEEcCCCCCCChHHHHH-HHHHHhhCCCeEEEcc
Confidence 6788889999999999876532 4555544 5888887765444443
No 372
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=82.69 E-value=2.3 Score=42.20 Aligned_cols=138 Identities=13% Similarity=0.064 Sum_probs=77.7
Q ss_pred CCCeEEEEcCCCc-hHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCC
Q psy17365 177 THHKVLDMCAAPG-SKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 177 pg~~VLDmCAaPG-gKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~ 255 (646)
.|..+|=-+|+.+ |....+|..+.. ....|+.+|.+...++.+.+.++..+...+.++..|.+........-.
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~------~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 78 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQ------LGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFE 78 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHH------TTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHH
Confidence 3667787777653 667777777652 134799999999999888888888887778888889876422110000
Q ss_pred CCCCCCCCCCeeecCCCCCCCccccc-Cccc-cccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGDGTMRK-NPDI-WTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~G~lrk-~pd~-~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
.-.......|.++.++-..+...+.. ..+. +..|....-.++ .....+...+..+++.||.||..
T Consensus 79 ~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~-~~~~~~~~~~~~~~~~~G~IVni 145 (256)
T 4fs3_A 79 QIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISS-YSLTIVAHEAKKLMPEGGSIVAT 145 (256)
T ss_dssp HHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHT-HHHHHHHHHHHTTCTTCEEEEEE
T ss_pred HHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHH-HHHHHHHHHHHHHhccCCEEEEE
Confidence 00011356898887765433222211 1111 011210000011 11223445566778889998854
No 373
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=82.64 E-value=2.1 Score=44.53 Aligned_cols=52 Identities=13% Similarity=0.130 Sum_probs=34.3
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP 235 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ 235 (646)
.++++|++||-.+| .|+....+++++.. ....|++.|.++++++.++ .+|..
T Consensus 158 ~~~~~g~~vlV~Ga-~ggiG~~~~~~a~~------~Ga~Vi~~~~~~~~~~~~~----~~g~~ 209 (354)
T 2j8z_A 158 GNVQAGDYVLIHAG-LSGVGTAAIQLTRM------AGAIPLVTAGSQKKLQMAE----KLGAA 209 (354)
T ss_dssp SCCCTTCEEEESST-TSHHHHHHHHHHHH------TTCEEEEEESCHHHHHHHH----HHTCS
T ss_pred cCCCCCCEEEEECC-ccHHHHHHHHHHHH------cCCEEEEEeCCHHHHHHHH----HcCCc
Confidence 46889999997764 34554444444431 1248999999999987763 45654
No 374
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=81.24 E-value=2.2 Score=43.51 Aligned_cols=95 Identities=16% Similarity=0.178 Sum_probs=55.8
Q ss_pred CCCC--CCeEEEEcC--CCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcc
Q psy17365 174 DVQT--HHKVLDMCA--APGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPN 249 (646)
Q Consensus 174 d~~p--g~~VLDmCA--aPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~ 249 (646)
++++ |. ||=.+| +-|..++|+|..+ +. .|++.+.+++|++.++ .+|...+. +.+....
T Consensus 142 ~~~~~~g~-VlV~Ga~G~vG~~aiqla~~~--------Ga-~Vi~~~~~~~~~~~~~----~lGa~~vi--~~~~~~~-- 203 (324)
T 3nx4_A 142 GIRPQDGE-VVVTGASGGVGSTAVALLHKL--------GY-QVAAVSGRESTHGYLK----SLGANRIL--SRDEFAE-- 203 (324)
T ss_dssp TCCGGGCC-EEESSTTSHHHHHHHHHHHHT--------TC-CEEEEESCGGGHHHHH----HHTCSEEE--EGGGSSC--
T ss_pred ccCCCCCe-EEEECCCcHHHHHHHHHHHHc--------CC-EEEEEeCCHHHHHHHH----hcCCCEEE--ecCCHHH--
Confidence 3555 45 776554 3355556666554 23 8999999999988775 47865432 2211111
Q ss_pred ccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 250 VLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 250 ~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
... .....+|.|+ | |+|. ..+..++++|++||++|..
T Consensus 204 ~~~------~~~~~~d~v~-d--~~g~--------------------------~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 204 SRP------LEKQLWAGAI-D--TVGD--------------------------KVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp CCS------SCCCCEEEEE-E--SSCH--------------------------HHHHHHHHTEEEEEEEEEC
T ss_pred HHh------hcCCCccEEE-E--CCCc--------------------------HHHHHHHHHHhcCCEEEEE
Confidence 100 0113588765 4 3331 2478899999999999853
No 375
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=81.06 E-value=2 Score=44.91 Aligned_cols=100 Identities=20% Similarity=0.207 Sum_probs=60.5
Q ss_pred cCCCCCCeEEEEcC--CCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccc
Q psy17365 173 LDVQTHHKVLDMCA--APGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNV 250 (646)
Q Consensus 173 Ld~~pg~~VLDmCA--aPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~ 250 (646)
.++++|++||=.+| +-|..++++|... ...|++.+.++++++.++ .+|...+ +..+...+...
T Consensus 159 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~---------Ga~Vi~~~~~~~~~~~~~----~~Ga~~~--~~~~~~~~~~~ 223 (362)
T 2c0c_A 159 GGLSEGKKVLVTAAAGGTGQFAMQLSKKA---------KCHVIGTCSSDEKSAFLK----SLGCDRP--INYKTEPVGTV 223 (362)
T ss_dssp TCCCTTCEEEETTTTBTTHHHHHHHHHHT---------TCEEEEEESSHHHHHHHH----HTTCSEE--EETTTSCHHHH
T ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHhC---------CCEEEEEECCHHHHHHHH----HcCCcEE--EecCChhHHHH
Confidence 36889999998874 3455556666553 237999999999887664 4676532 23222221110
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
.. ... ...+|.|+- |+|. ..+..++++|++||++|..
T Consensus 224 ~~-~~~----~~g~D~vid---~~g~--------------------------~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 224 LK-QEY----PEGVDVVYE---SVGG--------------------------AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp HH-HHC----TTCEEEEEE---CSCT--------------------------HHHHHHHHHEEEEEEEEEC
T ss_pred HH-Hhc----CCCCCEEEE---CCCH--------------------------HHHHHHHHHHhcCCEEEEE
Confidence 00 000 135887774 3331 2467789999999998853
No 376
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=81.04 E-value=1.6 Score=45.78 Aligned_cols=51 Identities=8% Similarity=0.035 Sum_probs=33.2
Q ss_pred CCC-CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q psy17365 174 DVQ-THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP 235 (646)
Q Consensus 174 d~~-pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ 235 (646)
.++ +|++||=.+| |+....+++++... ...|++.+.++.+++.+. +.+|..
T Consensus 183 ~~~~~g~~VlV~Ga--G~vG~~~~q~a~~~------Ga~Vi~~~~~~~~~~~~~---~~lGa~ 234 (366)
T 1yqd_A 183 GLDEPGKHIGIVGL--GGLGHVAVKFAKAF------GSKVTVISTSPSKKEEAL---KNFGAD 234 (366)
T ss_dssp TCCCTTCEEEEECC--SHHHHHHHHHHHHT------TCEEEEEESCGGGHHHHH---HTSCCS
T ss_pred CcCCCCCEEEEECC--CHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHH---HhcCCc
Confidence 567 9999999875 44444444433211 237999999998876653 256765
No 377
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=81.03 E-value=3.4 Score=40.68 Aligned_cols=136 Identities=14% Similarity=0.018 Sum_probs=74.7
Q ss_pred CCeEEEEcCCCc-hHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 178 HHKVLDMCAAPG-SKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 178 g~~VLDmCAaPG-gKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
|.+||=.+|+.| |...+++..+... ...|+.++.+....+.+.+..+..+..++.++..|.+...........
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 80 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEA------GARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFAS 80 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHT------TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHC------CCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHH
Confidence 556776666532 4777777776532 347888888877667676666666665788888998765322100000
Q ss_pred CCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhh----hHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 257 GNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNN----LHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 257 g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~----l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
-.......|.++..+-....+.. +..+...+.+.... ...-...+++.++.+++.+|++|+.+
T Consensus 81 ~~~~~g~id~li~~Ag~~~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 81 IKEQVGVIHGIAHCIAFANKEEL---VGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp HHHHHSCCCEEEECCCCCCGGGG---SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HHHHhCCeeEEEEcccccccccc---ccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 00011368988887643331100 00001112221111 11223456777788888899988754
No 378
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=80.90 E-value=2.7 Score=43.19 Aligned_cols=100 Identities=16% Similarity=0.149 Sum_probs=57.5
Q ss_pred cCCCCCCeEEEEcC--CCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccc
Q psy17365 173 LDVQTHHKVLDMCA--APGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNV 250 (646)
Q Consensus 173 Ld~~pg~~VLDmCA--aPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~ 250 (646)
.++++|++||=.+| |-|..+++++... ...|++.|.+.++++.+++ +|... ++..+...+...
T Consensus 141 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~---------G~~Vi~~~~~~~~~~~~~~----~g~~~--~~d~~~~~~~~~ 205 (333)
T 1wly_A 141 HKVKPGDYVLIHAAAGGMGHIMVPWARHL---------GATVIGTVSTEEKAETARK----LGCHH--TINYSTQDFAEV 205 (333)
T ss_dssp SCCCTTCEEEETTTTSTTHHHHHHHHHHT---------TCEEEEEESSHHHHHHHHH----HTCSE--EEETTTSCHHHH
T ss_pred hCCCCCCEEEEECCccHHHHHHHHHHHHC---------CCEEEEEeCCHHHHHHHHH----cCCCE--EEECCCHHHHHH
Confidence 46889999998775 3344444444432 2489999999988877643 56542 222221111110
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEE
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAY 320 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVY 320 (646)
.. ...+ ...+|.|+. |+|. ..+..++++|++||++|.
T Consensus 206 i~-~~~~---~~~~d~vi~---~~g~--------------------------~~~~~~~~~l~~~G~iv~ 242 (333)
T 1wly_A 206 VR-EITG---GKGVDVVYD---SIGK--------------------------DTLQKSLDCLRPRGMCAA 242 (333)
T ss_dssp HH-HHHT---TCCEEEEEE---CSCT--------------------------TTHHHHHHTEEEEEEEEE
T ss_pred HH-HHhC---CCCCeEEEE---CCcH--------------------------HHHHHHHHhhccCCEEEE
Confidence 00 0000 135888774 3332 126778899999999874
No 379
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=79.68 E-value=1 Score=46.88 Aligned_cols=70 Identities=19% Similarity=0.199 Sum_probs=43.5
Q ss_pred eEEE-ecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccC
Q psy17365 237 AIIT-NHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVG 315 (646)
Q Consensus 237 i~v~-~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpG 315 (646)
..++ ++|+..+.... ....||.|++|||.... .+ .|. ........-...|..+.++|++|
T Consensus 39 ~~l~i~gD~l~~L~~l--------~~~svDlI~tDPPY~~~------~d---~~~--~~~~~~~~~~~~l~~~~rvLk~~ 99 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKL--------PDDSVQLIICDPPYNIM------LA---DWD--DHMDYIGWAKRWLAEAERVLSPT 99 (319)
T ss_dssp EEEEEECCHHHHHHTS--------CTTCEEEEEECCCSBCC------GG---GGG--TCSSHHHHHHHHHHHHHHHEEEE
T ss_pred ceEEECCcHHHHHHhC--------ccCCcCEEEECCCCCCC------CC---Ccc--CHHHHHHHHHHHHHHHHHHcCCC
Confidence 4566 88886543211 12479999999998542 11 121 12223344567788889999999
Q ss_pred CeEEEEcCCCC
Q psy17365 316 GKIAYSTCSLN 326 (646)
Q Consensus 316 G~LVYSTCSl~ 326 (646)
|.|+.. |+..
T Consensus 100 G~i~i~-~~~~ 109 (319)
T 1eg2_A 100 GSIAIF-GGLQ 109 (319)
T ss_dssp EEEEEE-ECSC
T ss_pred eEEEEE-cCcc
Confidence 998866 4533
No 380
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=79.32 E-value=1.2 Score=45.75 Aligned_cols=50 Identities=18% Similarity=0.128 Sum_probs=34.2
Q ss_pred CCCCCC-eEEEEcC--CCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC
Q psy17365 174 DVQTHH-KVLDMCA--APGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC 236 (646)
Q Consensus 174 d~~pg~-~VLDmCA--aPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n 236 (646)
++++|+ +||=.+| +-|..++|+|..++ ..|++.+.+++|++.++ .+|...
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G---------a~vi~~~~~~~~~~~~~----~lGa~~ 198 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKRG---------YDVVASTGNREAADYLK----QLGASE 198 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHHT---------CCEEEEESSSSTHHHHH----HHTCSE
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHCC---------CEEEEEeCCHHHHHHHH----HcCCcE
Confidence 578886 8998876 33445566665542 36999999988877664 467654
No 381
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=79.06 E-value=3 Score=40.75 Aligned_cols=135 Identities=12% Similarity=-0.010 Sum_probs=74.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhh-cCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHA-ADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~-~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
+.+|| +.-|.|+...+++..+.. . ...|++++.+..++..+.+.+...+ .++.++..|.+....+......
T Consensus 4 ~k~vl-ITGasggIG~~~a~~L~~~~------g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~ 75 (276)
T 1wma_A 4 IHVAL-VTGGNKGIGLAIVRDLCRLF------SGDVVLTARDVTRGQAAVQQLQAEG-LSPRFHQLDIDDLQSIRALRDF 75 (276)
T ss_dssp CCEEE-ESSCSSHHHHHHHHHHHHHS------SSEEEEEESSHHHHHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHhc------CCeEEEEeCChHHHHHHHHHHHhcC-CeeEEEECCCCCHHHHHHHHHH
Confidence 44566 666789999999988763 2 2479999999988887777776655 3567788887764221100000
Q ss_pred CCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcC
Q psy17365 257 GNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTC 323 (646)
Q Consensus 257 g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTC 323 (646)
-......+|.|+..+-....+... .+. ...|. ........-...+++.+++.++++|++||.+.
T Consensus 76 ~~~~~g~id~li~~Ag~~~~~~~~-~~~-~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS 139 (276)
T 1wma_A 76 LRKEYGGLDVLVNNAGIAFKVADP-TPF-HIQAE-VTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS 139 (276)
T ss_dssp HHHHHSSEEEEEECCCCCCCTTCC-SCH-HHHHH-HHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HHHhcCCCCEEEECCcccccCCCc-ccc-HHHHH-hhhheeeeeHHHHHHHHHHhhCCCCEEEEECC
Confidence 000013689888765322211100 000 00110 00111112234567777788877899998753
No 382
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=78.71 E-value=3.3 Score=43.16 Aligned_cols=52 Identities=12% Similarity=0.020 Sum_probs=34.1
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP 235 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ 235 (646)
.++++|++||-.+|+ |+....+++.+.. ....|++.+.++++++.+ +.+|..
T Consensus 166 ~~~~~g~~vlV~Gas-ggiG~~~~~~a~~------~Ga~Vi~~~~~~~~~~~~----~~~ga~ 217 (351)
T 1yb5_A 166 ACVKAGESVLVHGAS-GGVGLAACQIARA------YGLKILGTAGTEEGQKIV----LQNGAH 217 (351)
T ss_dssp SCCCTTCEEEEETCS-SHHHHHHHHHHHH------TTCEEEEEESSHHHHHHH----HHTTCS
T ss_pred hCCCCcCEEEEECCC-ChHHHHHHHHHHH------CCCEEEEEeCChhHHHHH----HHcCCC
Confidence 468899999988763 3444444443321 124799999999988754 456754
No 383
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=78.65 E-value=2.2 Score=44.17 Aligned_cols=97 Identities=15% Similarity=0.110 Sum_probs=57.7
Q ss_pred cCCCCCCeEEEEcCC--CchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccc
Q psy17365 173 LDVQTHHKVLDMCAA--PGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNV 250 (646)
Q Consensus 173 Ld~~pg~~VLDmCAa--PGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~ 250 (646)
..+++|++||=.+|+ -|..++++|... ...|++. .++.+++.+ +.+|... +. +...+...
T Consensus 146 ~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~---------Ga~Vi~~-~~~~~~~~~----~~lGa~~---i~-~~~~~~~~ 207 (343)
T 3gaz_A 146 AQVQDGQTVLIQGGGGGVGHVAIQIALAR---------GARVFAT-ARGSDLEYV----RDLGATP---ID-ASREPEDY 207 (343)
T ss_dssp TCCCTTCEEEEETTTSHHHHHHHHHHHHT---------TCEEEEE-ECHHHHHHH----HHHTSEE---EE-TTSCHHHH
T ss_pred cCCCCCCEEEEecCCCHHHHHHHHHHHHC---------CCEEEEE-eCHHHHHHH----HHcCCCE---ec-cCCCHHHH
Confidence 467899999988743 344555555543 2378999 888887765 3467653 22 22221110
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEE
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAY 320 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVY 320 (646)
...... ...+|.|+- |+|. ..+..++++|++||++|.
T Consensus 208 ~~~~~~----~~g~D~vid---~~g~--------------------------~~~~~~~~~l~~~G~iv~ 244 (343)
T 3gaz_A 208 AAEHTA----GQGFDLVYD---TLGG--------------------------PVLDASFSAVKRFGHVVS 244 (343)
T ss_dssp HHHHHT----TSCEEEEEE---SSCT--------------------------HHHHHHHHHEEEEEEEEE
T ss_pred HHHHhc----CCCceEEEE---CCCc--------------------------HHHHHHHHHHhcCCeEEE
Confidence 000001 135897764 4441 247788999999999984
No 384
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=77.59 E-value=4.9 Score=40.12 Aligned_cols=86 Identities=14% Similarity=0.077 Sum_probs=55.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
|.+|| +.-|.|+...+++..+... ...|++++.+..+++.+...+...+..++.++..|.+...........-
T Consensus 28 ~k~vl-ITGasggIG~~la~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~ 100 (286)
T 1xu9_A 28 GKKVI-VTGASKGIGREMAYHLAKM------GAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQA 100 (286)
T ss_dssp TCEEE-ESSCSSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHH
Confidence 55677 5556788888888877532 3479999999999888877777767666788888887632211000000
Q ss_pred CCCCCCCCeeecC
Q psy17365 258 NKVPMKFDRVLCD 270 (646)
Q Consensus 258 ~~~~~~FD~IL~D 270 (646)
......+|.|+..
T Consensus 101 ~~~~g~iD~li~n 113 (286)
T 1xu9_A 101 GKLMGGLDMLILN 113 (286)
T ss_dssp HHHHTSCSEEEEC
T ss_pred HHHcCCCCEEEEC
Confidence 0001368988876
No 385
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=76.98 E-value=2.8 Score=45.28 Aligned_cols=51 Identities=12% Similarity=0.021 Sum_probs=35.2
Q ss_pred cCCCCCCeEEEEcC-C-CchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC
Q psy17365 173 LDVQTHHKVLDMCA-A-PGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPC 236 (646)
Q Consensus 173 Ld~~pg~~VLDmCA-a-PGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~n 236 (646)
.++++|++||=.+| | -|..++|+|..+ ...|++++.++.|++.++ .+|...
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~---------Ga~vi~~~~~~~~~~~~~----~lGa~~ 276 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAG---------GANPICVVSSPQKAEICR----AMGAEA 276 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT---------TCEEEEEESSHHHHHHHH----HHTCCE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc---------CCeEEEEECCHHHHHHHH----hhCCcE
Confidence 46889999997765 2 344555555543 247888889999988764 478753
No 386
>1sqw_A Saccharomyces cerevisiae NIP7P homolog; PUA, unknown function; 1.90A {Homo sapiens} SCOP: b.122.1.1 d.17.6.3 PDB: 1t5y_A
Probab=76.77 E-value=2.8 Score=40.44 Aligned_cols=127 Identities=14% Similarity=0.169 Sum_probs=77.9
Q ss_pred hhhhhHhhhCCCCCCCCCceeeeccC-----CCcCEEEEcChhhHHHHhhCCCCceEEeCceeeEEEecCCCCccceeec
Q psy17365 468 VWPPIRDFYEISPSLPVDCLLTRCLV-----GKKKIIYFTSPMVKNIIQSNENNLKIINTGVKSFARCDNKVMGCAFRFC 542 (646)
Q Consensus 468 ~~~~i~~~ygi~~~f~~~~~~~R~~~-----g~~~~iy~~s~~~~~i~~~~~~~lkiv~~Gvk~F~r~~~~~~~c~~Ri~ 542 (646)
+++.+..|-|-+ ...|+.|..+ ..++.|||+|+.+.+.+. +..+.+++++|+-+=.-... . .||++
T Consensus 12 vf~kL~~yiG~n----~~~li~~~~~~~~frl~~~rVyyv~~~i~~~a~-~i~r~~l~s~Gtc~Gkftk~--g--kF~L~ 82 (188)
T 1sqw_A 12 MFEKIAKYIGEN----LQLLVDRPDGTYCFRLHNDRVYYVSEKIMKLAA-NISGDKLVSLGTCFGKFTKT--H--KFRLH 82 (188)
T ss_dssp HHHHHHHHHGGG----THHHHEETTEEEEEEEETTEEEEEEHHHHHTTT-SSCHHHHHHHSEEEEEECTT--S--CEEEC
T ss_pred HHHHHHHHhccC----HHHHhcCCCCceEEEecCCEEEEECHHHHHHHh-cCCcCCeeEeeeEEEEEecC--C--cEEEc
Confidence 466777776643 2223333210 135899999998887653 34567899999976332221 1 59999
Q ss_pred cchhHHHhhhhCCCcEEEeCHHHHHHHHhcCCCCCCccccccCHHHHhhhcccCCCCccEEEEEec-CCCeEEE
Q psy17365 543 QEGLSSMKAFIGEKRKVRVNREELITILNNSTPEQPTDLELLRPETRQTLTREGFGVGSCLLELQD-DLPLSLV 615 (646)
Q Consensus 543 ~eg~~~l~~~~~~kr~v~~~~~~~~~ll~~~~p~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~-~~~~~~~ 615 (646)
-+|+..|+||. . -+|-+..+--..+|...+.+. ..+..+++ ++..|.-|+++.. +..+.++
T Consensus 83 It~l~~La~~~-~-~kV~Vk~~~E~~flyG~nVfk-~~V~~i~e---------~i~~~~~VvV~n~~d~pLG~G 144 (188)
T 1sqw_A 83 VTALDYLAPYA-K-YKVWIKPGAEQSFLYGNHVLK-SGLGRITE---------NTSQYQGVVVYSMADIPLGFG 144 (188)
T ss_dssp GGGHHHHGGGC-S-CEEEECHHHHHHHTTTCCEEG-GGEEEECT---------TCCTTCEEEEEETTCCEEEEE
T ss_pred hhHHHHhhhcc-C-cEEEECCCceeeEEeccchhH-HhhhhcCC---------CCCCCCEEEEEeCCCCEEEEE
Confidence 99999999985 4 555667666666666655430 01222222 5567777888775 4444443
No 387
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=76.64 E-value=3.5 Score=44.32 Aligned_cols=54 Identities=17% Similarity=0.164 Sum_probs=34.8
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCe
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCA 237 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni 237 (646)
.++++|++||=.+| .|+....++++... -...|++.+.++.+++.+ +.+|...+
T Consensus 216 ~~~~~g~~VlV~Ga-sG~iG~~a~qla~~------~Ga~vi~~~~~~~~~~~~----~~lGa~~~ 269 (447)
T 4a0s_A 216 AQMKQGDIVLIWGA-SGGLGSYAIQFVKN------GGGIPVAVVSSAQKEAAV----RALGCDLV 269 (447)
T ss_dssp TCCCTTCEEEETTT-TSHHHHHHHHHHHH------TTCEEEEEESSHHHHHHH----HHTTCCCE
T ss_pred cCCCCCCEEEEECC-CCHHHHHHHHHHHH------cCCEEEEEeCCHHHHHHH----HhcCCCEE
Confidence 56889999996665 34444433333321 134788999999998776 45787643
No 388
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=76.42 E-value=4.9 Score=40.63 Aligned_cols=147 Identities=16% Similarity=0.022 Sum_probs=77.0
Q ss_pred ecccccccccccCCCCCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEE
Q psy17365 162 QEAVSMIPPLLLDVQTHHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIIT 240 (646)
Q Consensus 162 Qd~~Sml~~~~Ld~~pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~ 240 (646)
|-+.||-+...+ .|.+||=.+|+. ++...+++..+... ...|+.+|.+....+.+....+..+. +.++
T Consensus 17 ~gp~sm~~~~~l---~~k~vlVTGasg~~GIG~~ia~~la~~------G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~ 85 (296)
T 3k31_A 17 QGPGSMRTGMLM---EGKKGVIIGVANDKSLAWGIAKAVCAQ------GAEVALTYLSETFKKRVDPLAESLGV--KLTV 85 (296)
T ss_dssp ----CCCCCCTT---TTCEEEEECCCSTTSHHHHHHHHHHHT------TCEEEEEESSGGGHHHHHHHHHHHTC--CEEE
T ss_pred cCCccccchhcc---CCCEEEEEeCCCCCCHHHHHHHHHHHC------CCEEEEEeCChHHHHHHHHHHHhcCC--eEEE
Confidence 556676554332 466788777764 47788888877532 34788999998766666665555553 5677
Q ss_pred ecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhh----hHHHHHHHHHHHHHhhccCC
Q psy17365 241 NHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNN----LHGIQYRIVKRGVEMLAVGG 316 (646)
Q Consensus 241 ~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~----l~~lQ~~IL~~A~~lLKpGG 316 (646)
..|.+...........-.......|.++..+-......+. .+ +...+.++... ...-...+++.++..++.+|
T Consensus 86 ~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~-~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g 162 (296)
T 3k31_A 86 PCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELK-GR--YVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGG 162 (296)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHT-SC--GGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCE
T ss_pred EcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCccccc-CC--hhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 8888764221100000000124689888866432210000 00 01112111111 11223456777778888899
Q ss_pred eEEEEc
Q psy17365 317 KIAYST 322 (646)
Q Consensus 317 ~LVYST 322 (646)
++|+.+
T Consensus 163 ~IV~is 168 (296)
T 3k31_A 163 SILTLS 168 (296)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 998754
No 389
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=75.56 E-value=0.99 Score=45.83 Aligned_cols=91 Identities=24% Similarity=0.279 Sum_probs=56.7
Q ss_pred CCCCCeEEEEcC--CCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCC-CCCcccc
Q psy17365 175 VQTHHKVLDMCA--APGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDA-SVMPNVL 251 (646)
Q Consensus 175 ~~pg~~VLDmCA--aPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da-~~~p~~~ 251 (646)
+++|++||-.+| +-|..++++|..+ ...|++.|.++.+++.++ .+|...+ +..+. ..+...
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~---------Ga~Vi~~~~~~~~~~~~~----~~ga~~~--~~~~~~~~~~~~- 186 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM---------GLRVLAAASRPEKLALPL----ALGAEEA--ATYAEVPERAKA- 186 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT---------TCEEEEEESSGGGSHHHH----HTTCSEE--EEGGGHHHHHHH-
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC---------CCEEEEEeCCHHHHHHHH----hcCCCEE--EECCcchhHHHH-
Confidence 789999998886 2344555555543 238999999999887663 4676532 22211 111100
Q ss_pred ccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEE
Q psy17365 252 YTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAY 320 (646)
Q Consensus 252 ~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVY 320 (646)
...+|.|+- +. + ..+..++++|++||++|.
T Consensus 187 ---------~~~~d~vid-~g--~---------------------------~~~~~~~~~l~~~G~~v~ 216 (302)
T 1iz0_A 187 ---------WGGLDLVLE-VR--G---------------------------KEVEESLGLLAHGGRLVY 216 (302)
T ss_dssp ---------TTSEEEEEE-CS--C---------------------------TTHHHHHTTEEEEEEEEE
T ss_pred ---------hcCceEEEE-CC--H---------------------------HHHHHHHHhhccCCEEEE
Confidence 035888875 43 1 125678899999999884
No 390
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=75.41 E-value=4.9 Score=39.37 Aligned_cols=130 Identities=15% Similarity=0.050 Sum_probs=72.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcC-CHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDV-DNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Di-s~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
+.+|| +.-|.|+...++++.+... ...|++++. +..++..+...++..+. ++.++..|.+....+......
T Consensus 21 ~k~vl-ItGasggiG~~la~~l~~~------G~~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~ 92 (274)
T 1ja9_A 21 GKVAL-TTGAGRGIGRGIAIELGRR------GASVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQADISKPSEVVALFDK 92 (274)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHT------TCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEE-EeCCCchHHHHHHHHHHHC------CCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHH
Confidence 55666 5667789999999887632 347888888 88887777776666553 467778887753221100000
Q ss_pred CCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhh----hHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 257 GNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNN----LHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 257 g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~----l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
-......+|.|+..+-....+.+. ..+.+.... ...-...+++.+++.++.||++|+.+
T Consensus 93 ~~~~~~~~d~vi~~Ag~~~~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~s 155 (274)
T 1ja9_A 93 AVSHFGGLDFVMSNSGMEVWCDEL-------EVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTS 155 (274)
T ss_dssp HHHHHSCEEEEECCCCCCCCCCGG-------GCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHcCCCCEEEECCCCCCCcccc-------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEc
Confidence 000013578888765433222111 112111111 11223456666777776678888753
No 391
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=74.27 E-value=8.6 Score=38.87 Aligned_cols=131 Identities=12% Similarity=0.040 Sum_probs=73.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
.|..||=.+ |.|+...+++..+... ...|++.+.+..++..+.+.+...+. ++.++..|.+...........
T Consensus 30 ~gk~vlVTG-as~gIG~~la~~l~~~------G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~ 101 (301)
T 3tjr_A 30 DGRAAVVTG-GASGIGLATATEFARR------GARLVLSDVDQPALEQAVNGLRGQGF-DAHGVVCDVRHLDEMVRLADE 101 (301)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeC-CCCHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHH
Confidence 466777555 4577888888877532 34799999999999888887776653 577788888764321100000
Q ss_pred CCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhh----HHHHHHHHHHHHHhhcc---CCeEEEEc
Q psy17365 257 GNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNL----HGIQYRIVKRGVEMLAV---GGKIAYST 322 (646)
Q Consensus 257 g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l----~~lQ~~IL~~A~~lLKp---GG~LVYST 322 (646)
-.......|.|+..+--...+.+. ..+.++.... ..-...+++.++..++. +|++|+.+
T Consensus 102 ~~~~~g~id~lvnnAg~~~~~~~~-------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~is 167 (301)
T 3tjr_A 102 AFRLLGGVDVVFSNAGIVVAGPLA-------QMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTA 167 (301)
T ss_dssp HHHHHSSCSEEEECCCCCCCBCGG-------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred HHHhCCCCCEEEECCCcCCCCCcc-------cCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 000113689998876433322221 1122221111 12233456666665543 68888753
No 392
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=73.98 E-value=5.3 Score=41.46 Aligned_cols=56 Identities=13% Similarity=0.084 Sum_probs=34.2
Q ss_pred cCCCCCCeEEEEcC--CCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCe
Q psy17365 173 LDVQTHHKVLDMCA--APGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCA 237 (646)
Q Consensus 173 Ld~~pg~~VLDmCA--aPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni 237 (646)
.++++|++||=.+| +-|..++|+|..++ ...|++++.++++.+. .+.++.+|...+
T Consensus 163 ~~~~~g~~VlV~Ga~G~vG~~aiqlak~~G--------a~vi~~~~~~~~~~~~-~~~~~~lGa~~v 220 (357)
T 1zsy_A 163 EQLQPGDSVIQNASNSGVGQAVIQIAAALG--------LRTINVVRDRPDIQKL-SDRLKSLGAEHV 220 (357)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHT--------CEEEEEECCCSCHHHH-HHHHHHTTCSEE
T ss_pred hccCCCCEEEEeCCcCHHHHHHHHHHHHcC--------CEEEEEecCccchHHH-HHHHHhcCCcEE
Confidence 46889999998876 34666777777653 4456666665432211 123456887643
No 393
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=73.45 E-value=3.4 Score=41.93 Aligned_cols=88 Identities=13% Similarity=-0.005 Sum_probs=56.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
|.+|| +.-|.|+...+++..+... ...|+.+|.+..++..+.+.+...+..++.++..|.+...........-
T Consensus 41 ~k~vl-VTGas~GIG~aia~~la~~------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 113 (293)
T 3rih_A 41 ARSVL-VTGGTKGIGRGIATVFARA------GANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTV 113 (293)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHT------TCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHH
Confidence 44555 5666788888888887532 3479999999998888877777666567888888987642211000000
Q ss_pred CCCCCCCCeeecCCC
Q psy17365 258 NKVPMKFDRVLCDVP 272 (646)
Q Consensus 258 ~~~~~~FD~IL~D~P 272 (646)
.......|.++..+-
T Consensus 114 ~~~~g~iD~lvnnAg 128 (293)
T 3rih_A 114 VDAFGALDVVCANAG 128 (293)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 001246898888764
No 394
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=73.21 E-value=7.4 Score=38.20 Aligned_cols=132 Identities=14% Similarity=0.051 Sum_probs=74.4
Q ss_pred CCCeEEEEcCCCc-hHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCC
Q psy17365 177 THHKVLDMCAAPG-SKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 177 pg~~VLDmCAaPG-gKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~ 255 (646)
.|.+||=.++ .| |...+++..+... ...|++++.+..++..+...++..+..++.++..|.+..........
T Consensus 21 ~~k~vlITGa-sg~GIG~~~a~~l~~~------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~ 93 (266)
T 3o38_A 21 KGKVVLVTAA-AGTGIGSTTARRALLE------GADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALIT 93 (266)
T ss_dssp TTCEEEESSC-SSSSHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECC-CCCchHHHHHHHHHHC------CCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHH
Confidence 3556665554 34 5677777776532 34799999999999888888877666678889999876432110000
Q ss_pred CCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhh----hHHHHHHHHHHHHHhhc---cCCeEEEEc
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNN----LHGIQYRIVKRGVEMLA---VGGKIAYST 322 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~----l~~lQ~~IL~~A~~lLK---pGG~LVYST 322 (646)
.-.......|.|+..+--+..+.+. ..+.++... ...-...+++.++..++ .+|++|+.+
T Consensus 94 ~~~~~~g~id~li~~Ag~~~~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~s 160 (266)
T 3o38_A 94 QTVEKAGRLDVLVNNAGLGGQTPVV-------DMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNA 160 (266)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGG-------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEEC
T ss_pred HHHHHhCCCcEEEECCCcCCCCCcc-------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeC
Confidence 0000123689998876433322211 112221111 11223455666666664 567888753
No 395
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=73.19 E-value=4.4 Score=42.29 Aligned_cols=93 Identities=16% Similarity=0.105 Sum_probs=54.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCH---HHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDN---NRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~---~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
|++||-.+| |+....+++++... +. .|++.|.+. ++++.++ .+|...+ ..+ .+..... .
T Consensus 181 g~~VlV~Ga--G~vG~~~~q~a~~~-----Ga-~Vi~~~~~~~~~~~~~~~~----~~ga~~v---~~~--~~~~~~~-~ 242 (366)
T 2cdc_A 181 CRKVLVVGT--GPIGVLFTLLFRTY-----GL-EVWMANRREPTEVEQTVIE----ETKTNYY---NSS--NGYDKLK-D 242 (366)
T ss_dssp TCEEEEESC--HHHHHHHHHHHHHH-----TC-EEEEEESSCCCHHHHHHHH----HHTCEEE---ECT--TCSHHHH-H
T ss_pred CCEEEEECC--CHHHHHHHHHHHhC-----CC-EEEEEeCCccchHHHHHHH----HhCCcee---chH--HHHHHHH-H
Confidence 999999987 55544444443211 23 899999998 8876553 4675432 222 2211100 0
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHH-HHHHHhhccCCeEEEE
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIV-KRGVEMLAVGGKIAYS 321 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL-~~A~~lLKpGG~LVYS 321 (646)
. ...+|.|+- |+|.. ..+ ..++++|++||++|..
T Consensus 243 -~----~~~~d~vid---~~g~~-------------------------~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 243 -S----VGKFDVIID---ATGAD-------------------------VNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp -H----HCCEEEEEE---CCCCC-------------------------THHHHHHGGGEEEEEEEEEC
T ss_pred -h----CCCCCEEEE---CCCCh-------------------------HHHHHHHHHHHhcCCEEEEE
Confidence 0 135898875 33321 134 7788999999998854
No 396
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=72.64 E-value=2.1 Score=43.92 Aligned_cols=75 Identities=12% Similarity=0.164 Sum_probs=40.5
Q ss_pred CCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHHHHHHHHHc
Q psy17365 262 MKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAVIQRLIVET 341 (646)
Q Consensus 262 ~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~VV~~~L~~~ 341 (646)
.++|+||+|..-.-.|. ++ ..-......++. ++.-|.++|+|||.+|--.-...--.-|.++..+.+.+
T Consensus 205 ~k~DvV~SDMApn~sGh---------~y-qQC~DHarii~L-al~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~F 273 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYH---------HY-QQCEDHAIKLSM-LTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQF 273 (320)
T ss_dssp CCEEEEEEECCCCCCSC---------HH-HHHHHHHHHHHH-THHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTE
T ss_pred CcCCEEEEcCCCCCCCc---------cc-cccchHHHHHHH-HHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHHhc
Confidence 57999999965333331 00 100122223333 89999999999999993322222113455555544443
Q ss_pred cCcEEEe
Q psy17365 342 QGAVQLV 348 (646)
Q Consensus 342 ~~~~elv 348 (646)
. .+..+
T Consensus 274 ~-~Vr~v 279 (320)
T 2hwk_A 274 K-FSRVC 279 (320)
T ss_dssp E-EEEEE
T ss_pred c-eeeee
Confidence 2 34444
No 397
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=72.37 E-value=8.6 Score=40.18 Aligned_cols=101 Identities=12% Similarity=0.089 Sum_probs=59.8
Q ss_pred CCCCeEEEEcCC--CchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccccc
Q psy17365 176 QTHHKVLDMCAA--PGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYT 253 (646)
Q Consensus 176 ~pg~~VLDmCAa--PGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~ 253 (646)
++|++||=.+|+ -|..++|+|..++ ..|++.. +++|++.+ +.+|... +++.....+.....
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~G---------a~Vi~~~-~~~~~~~~----~~lGa~~--vi~~~~~~~~~~v~- 225 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSG---------YIPIATC-SPHNFDLA----KSRGAEE--VFDYRAPNLAQTIR- 225 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTT---------CEEEEEE-CGGGHHHH----HHTTCSE--EEETTSTTHHHHHH-
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCC---------CEEEEEe-CHHHHHHH----HHcCCcE--EEECCCchHHHHHH-
Confidence 899999988773 5667777776642 3677774 78887655 4678653 33332222211000
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhh-ccCCeEEEEcCCCCc
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEML-AVGGKIAYSTCSLNP 327 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lL-KpGG~LVYSTCSl~p 327 (646)
... ...+|.|+- |+|.. ..+..++++| ++||++|. |...+
T Consensus 226 ~~t----~g~~d~v~d---~~g~~-------------------------~~~~~~~~~l~~~~G~iv~--~g~~~ 266 (371)
T 3gqv_A 226 TYT----KNNLRYALD---CITNV-------------------------ESTTFCFAAIGRAGGHYVS--LNPFP 266 (371)
T ss_dssp HHT----TTCCCEEEE---SSCSH-------------------------HHHHHHHHHSCTTCEEEEE--SSCCC
T ss_pred HHc----cCCccEEEE---CCCch-------------------------HHHHHHHHHhhcCCCEEEE--EecCc
Confidence 000 124898773 44432 3477788899 69999873 45433
No 398
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=71.04 E-value=6.6 Score=40.64 Aligned_cols=103 Identities=15% Similarity=0.130 Sum_probs=58.9
Q ss_pred cCCCCC--CeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccc
Q psy17365 173 LDVQTH--HKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNV 250 (646)
Q Consensus 173 Ld~~pg--~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~ 250 (646)
.++++| ++||-.+| .|+....+++++... +.+.|++.|.+..+++.+.+ .+|... ++..+...+...
T Consensus 154 ~~~~~g~~~~vlI~Ga-sggiG~~~~~~a~~~-----Ga~~Vi~~~~~~~~~~~~~~---~~g~~~--~~d~~~~~~~~~ 222 (357)
T 2zb4_A 154 GHITAGSNKTMVVSGA-AGACGSVAGQIGHFL-----GCSRVVGICGTHEKCILLTS---ELGFDA--AINYKKDNVAEQ 222 (357)
T ss_dssp SCCCTTSCCEEEESST-TBHHHHHHHHHHHHT-----TCSEEEEEESCHHHHHHHHH---TSCCSE--EEETTTSCHHHH
T ss_pred cCCCCCCccEEEEECC-CcHHHHHHHHHHHHC-----CCCeEEEEeCCHHHHHHHHH---HcCCce--EEecCchHHHHH
Confidence 468899 99998776 345555444444311 23489999999988776643 256542 222221111110
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEE
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAY 320 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVY 320 (646)
.. ... ...+|.|+. |+|. ..+..++++|++||++|.
T Consensus 223 ~~-~~~----~~~~d~vi~---~~G~--------------------------~~~~~~~~~l~~~G~iv~ 258 (357)
T 2zb4_A 223 LR-ESC----PAGVDVYFD---NVGG--------------------------NISDTVISQMNENSHIIL 258 (357)
T ss_dssp HH-HHC----TTCEEEEEE---SCCH--------------------------HHHHHHHHTEEEEEEEEE
T ss_pred HH-Hhc----CCCCCEEEE---CCCH--------------------------HHHHHHHHHhccCcEEEE
Confidence 00 000 015787764 3331 247788999999999985
No 399
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=70.67 E-value=14 Score=37.17 Aligned_cols=150 Identities=14% Similarity=0.028 Sum_probs=73.3
Q ss_pred EEecccccccccccCCCCCCeEEEEcCCCc-hHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeE
Q psy17365 160 SRQEAVSMIPPLLLDVQTHHKVLDMCAAPG-SKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAI 238 (646)
Q Consensus 160 ~~Qd~~Sml~~~~Ld~~pg~~VLDmCAaPG-gKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~ 238 (646)
+.|.+.+|-... ..-.|.+||=.+|+.| |...+++..+... ...|+.++.+....+.+.+..+..+ .+.
T Consensus 15 ~~~gp~~~~~~~--~~l~gk~~lVTGasg~~GIG~aia~~la~~------G~~V~~~~r~~~~~~~~~~~~~~~~--~~~ 84 (293)
T 3grk_A 15 QTQGPGSMTAQS--GLLQGKRGLILGVANNRSIAWGIAKAAREA------GAELAFTYQGDALKKRVEPLAEELG--AFV 84 (293)
T ss_dssp --------------CTTTTCEEEEECCCSSSSHHHHHHHHHHHT------TCEEEEEECSHHHHHHHHHHHHHHT--CEE
T ss_pred cccCCCCCCccc--ccCCCCEEEEEcCCCCCcHHHHHHHHHHHC------CCEEEEEcCCHHHHHHHHHHHHhcC--Cce
Confidence 345555553321 2235678887777654 5777777776522 3468889998766565555555554 467
Q ss_pred EEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhh----hhHHHHHHHHHHHHHhhcc
Q psy17365 239 ITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGN----NLHGIQYRIVKRGVEMLAV 314 (646)
Q Consensus 239 v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~----~l~~lQ~~IL~~A~~lLKp 314 (646)
++..|.+...........-.......|.++..+--...+.+. .+ +...+.++.. ....-...+++.++..++.
T Consensus 85 ~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~-~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~ 161 (293)
T 3grk_A 85 AGHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELT-GR--YIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD 161 (293)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHT-SC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT
T ss_pred EEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCccccc-cc--ccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 788888764221100000000124689888866322100000 00 0111222111 1112234567778888888
Q ss_pred CCeEEEEc
Q psy17365 315 GGKIAYST 322 (646)
Q Consensus 315 GG~LVYST 322 (646)
+|++|+.+
T Consensus 162 ~g~Iv~is 169 (293)
T 3grk_A 162 GGSILTLT 169 (293)
T ss_dssp CEEEEEEE
T ss_pred CCEEEEEe
Confidence 99998754
No 400
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=70.37 E-value=12 Score=37.29 Aligned_cols=88 Identities=9% Similarity=0.000 Sum_probs=53.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcC-CHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDV-DNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Di-s~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~ 255 (646)
.+..||=. -|.|+...++++.+... ...|+.+|. +..+++.+...+...+ ..+.++..|.+..........
T Consensus 28 ~~k~~lVT-Gas~GIG~aia~~la~~------G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~ 99 (280)
T 4da9_A 28 ARPVAIVT-GGRRGIGLGIARALAAS------GFDIAITGIGDAEGVAPVIAELSGLG-ARVIFLRADLADLSSHQATVD 99 (280)
T ss_dssp CCCEEEEE-TTTSHHHHHHHHHHHHT------TCEEEEEESCCHHHHHHHHHHHHHTT-CCEEEEECCTTSGGGHHHHHH
T ss_pred CCCEEEEe-cCCCHHHHHHHHHHHHC------CCeEEEEeCCCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHH
Confidence 35566644 45677888888877532 347888885 7888887777777665 357788889876432210000
Q ss_pred CCCCCCCCCCeeecCCC
Q psy17365 256 DGNKVPMKFDRVLCDVP 272 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~P 272 (646)
.-.......|.++..+-
T Consensus 100 ~~~~~~g~iD~lvnnAg 116 (280)
T 4da9_A 100 AVVAEFGRIDCLVNNAG 116 (280)
T ss_dssp HHHHHHSCCCEEEEECC
T ss_pred HHHHHcCCCCEEEECCC
Confidence 00001236898888663
No 401
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=69.87 E-value=5.9 Score=40.39 Aligned_cols=93 Identities=17% Similarity=0.171 Sum_probs=54.4
Q ss_pred cCCCCCCeEEEEc-CC-CchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCC-Ccc
Q psy17365 173 LDVQTHHKVLDMC-AA-PGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASV-MPN 249 (646)
Q Consensus 173 Ld~~pg~~VLDmC-Aa-PGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~-~p~ 249 (646)
..+++|++||=.+ +| -|..++|+|..+ ...|++.+ +..+++. ++.+|... +++.+... +..
T Consensus 148 ~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~---------Ga~vi~~~-~~~~~~~----~~~lGa~~--~i~~~~~~~~~~ 211 (321)
T 3tqh_A 148 AEVKQGDVVLIHAGAGGVGHLAIQLAKQK---------GTTVITTA-SKRNHAF----LKALGAEQ--CINYHEEDFLLA 211 (321)
T ss_dssp TTCCTTCEEEESSTTSHHHHHHHHHHHHT---------TCEEEEEE-CHHHHHH----HHHHTCSE--EEETTTSCHHHH
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHc---------CCEEEEEe-ccchHHH----HHHcCCCE--EEeCCCcchhhh
Confidence 4789999999664 22 244555555543 23788887 5555444 45678764 23322211 111
Q ss_pred ccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEE
Q psy17365 250 VLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAY 320 (646)
Q Consensus 250 ~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVY 320 (646)
....+|.|+- |+|. ..+..++++|++||++|.
T Consensus 212 ----------~~~g~D~v~d---~~g~--------------------------~~~~~~~~~l~~~G~iv~ 243 (321)
T 3tqh_A 212 ----------ISTPVDAVID---LVGG--------------------------DVGIQSIDCLKETGCIVS 243 (321)
T ss_dssp ----------CCSCEEEEEE---SSCH--------------------------HHHHHHGGGEEEEEEEEE
T ss_pred ----------hccCCCEEEE---CCCc--------------------------HHHHHHHHhccCCCEEEE
Confidence 0135887764 4442 123678899999999984
No 402
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=69.06 E-value=11 Score=37.07 Aligned_cols=133 Identities=11% Similarity=0.006 Sum_probs=72.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
|.+|| +.-|.|+...+++..+... ...|+..|.+..+++.+.+.+...+ ..+.++..|.+...........-
T Consensus 12 ~k~vl-VTGas~gIG~~ia~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~ 83 (256)
T 3gaf_A 12 DAVAI-VTGAAAGIGRAIAGTFAKA------GASVVVTDLKSEGAEAVAAAIRQAG-GKAIGLECNVTDEQHREAVIKAA 83 (256)
T ss_dssp TCEEE-ECSCSSHHHHHHHHHHHHH------TCEEEEEESSHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHH
Confidence 45555 4556678888888877532 3479999999999988888887766 35777788887642211000000
Q ss_pred CCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhcc--CCeEEEEc
Q psy17365 258 NKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAV--GGKIAYST 322 (646)
Q Consensus 258 ~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKp--GG~LVYST 322 (646)
.......|.++..+--+..+.+...++ .|... ......-...+++.++..++. +|++|+.+
T Consensus 84 ~~~~g~id~lv~nAg~~~~~~~~~~~~---~~~~~-~~vN~~g~~~l~~~~~~~~~~~~~g~iv~is 146 (256)
T 3gaf_A 84 LDQFGKITVLVNNAGGGGPKPFDMPMS---DFEWA-FKLNLFSLFRLSQLAAPHMQKAGGGAILNIS 146 (256)
T ss_dssp HHHHSCCCEEEECCCCCCCCCTTCCHH---HHHHH-HHHHTHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHcCCCCEEEECCCCCCCCCCCCCHH---HHHHH-HHHHhHHHHHHHHHHHHHHHhcCCcEEEEEc
Confidence 001236898888764333322211111 11100 111112233456666666543 67888753
No 403
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=68.84 E-value=13 Score=36.65 Aligned_cols=133 Identities=11% Similarity=-0.017 Sum_probs=74.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCC------------HHHHHHHHHHHHHcCCCCeEEEecCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVD------------NNRCYMLVHQAKRLNSPCAIITNHDA 244 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis------------~~Rl~~L~~n~~rlg~~ni~v~~~Da 244 (646)
.|.+||=. -|.|+...+++..+... ...|+.+|.+ ..+++.+...+...+ .++.++..|.
T Consensus 9 ~gk~vlVT-Gas~gIG~~ia~~l~~~------G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~ 80 (287)
T 3pxx_A 9 QDKVVLVT-GGARGQGRSHAVKLAEE------GADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG-RKAYTAEVDV 80 (287)
T ss_dssp TTCEEEEE-TTTSHHHHHHHHHHHHT------TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT-SCEEEEECCT
T ss_pred CCCEEEEe-CCCChHHHHHHHHHHHC------CCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC-CceEEEEccC
Confidence 35566644 45577888888877532 3478889887 777777777776665 3577788888
Q ss_pred CCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 245 SVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 245 ~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
+...........-.......|.++..+--...+ ....++ .|.. .......-...+++.++..++.+|++|+.+
T Consensus 81 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~---~~~~-~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 81 RDRAAVSRELANAVAEFGKLDVVVANAGICPLG-AHLPVQ---AFAD-AFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC-TTCCTH---HHHH-HHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCcCccc-CcCCHH---HHHH-HhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 764321100000000113689888876433222 111111 1111 011111223456777788888899998764
No 404
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=68.30 E-value=50 Score=32.51 Aligned_cols=89 Identities=11% Similarity=0.006 Sum_probs=58.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCC-ccccccCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVM-PNVLYTDAD 256 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~-p~~~~~~~~ 256 (646)
+.+|| +.-|.||...+++..+... ...|++.+.+..++..+...+...+..++.++..|.+.. .........
T Consensus 12 ~k~vl-ITGas~GIG~~~a~~L~~~------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~ 84 (311)
T 3o26_A 12 RRCAV-VTGGNKGIGFEICKQLSSN------GIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADF 84 (311)
T ss_dssp CCEEE-ESSCSSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHH
T ss_pred CcEEE-EecCCchHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHH
Confidence 44565 5666788899998887532 348999999999988888888777666788889998775 211000000
Q ss_pred CCCCCCCCCeeecCCCC
Q psy17365 257 GNKVPMKFDRVLCDVPC 273 (646)
Q Consensus 257 g~~~~~~FD~IL~D~PC 273 (646)
-.......|.++..|--
T Consensus 85 ~~~~~g~iD~lv~nAg~ 101 (311)
T 3o26_A 85 IKTHFGKLDILVNNAGV 101 (311)
T ss_dssp HHHHHSSCCEEEECCCC
T ss_pred HHHhCCCCCEEEECCcc
Confidence 00012368999987643
No 405
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=67.98 E-value=36 Score=36.72 Aligned_cols=125 Identities=16% Similarity=0.197 Sum_probs=71.2
Q ss_pred CCchHHHHHHHHhhhcCCCCCCCc-EEEEEcCCHHHHHHHHHHH------------HHc-CCCCeEEEecCCCCCccccc
Q psy17365 187 APGSKTAQIIEMIHAADSNPVPSG-LVVANDVDNNRCYMLVHQA------------KRL-NSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 187 aPGgKT~~lae~l~~~~~~~~~~G-~VvA~Dis~~Rl~~L~~n~------------~rl-g~~ni~v~~~Da~~~p~~~~ 252 (646)
|.|...+.+|..+.. .| .|+++|+++++++.|.+.. ++. ...++.++. |+
T Consensus 18 GlGyvGlp~A~~La~-------~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~tt-d~-------- 81 (431)
T 3ojo_A 18 GLGYIGLPTSIMFAK-------HGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVST-TP-------- 81 (431)
T ss_dssp CCSTTHHHHHHHHHH-------TTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEES-SC--------
T ss_pred eeCHHHHHHHHHHHH-------CCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeC-ch--------
Confidence 556666667766642 33 7999999999998886520 000 011222221 11
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHH
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEA 332 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~ 332 (646)
..-|.|++=+|-..+..-...||+ ..+ +...+...+.|++|..+|+.+ |+.|.-.+.
T Consensus 82 ---------~~aDvvii~VpTp~~~~~~~~~Dl------------~~V-~~~~~~i~~~l~~g~iVV~~S-TV~pgtt~~ 138 (431)
T 3ojo_A 82 ---------EASDVFIIAVPTPNNDDQYRSCDI------------SLV-MRALDSILPFLKKGNTIIVES-TIAPKTMDD 138 (431)
T ss_dssp ---------CCCSEEEECCCCCBCSSSSCBBCC------------HHH-HHHHHHHGGGCCTTEEEEECS-CCCTTHHHH
T ss_pred ---------hhCCEEEEEeCCCccccccCCccH------------HHH-HHHHHHHHHhCCCCCEEEEec-CCChhHHHH
Confidence 246888887773322100023443 111 122345566788877777654 899988898
Q ss_pred HHHHHHHHcc----CcEEEeec
Q psy17365 333 VIQRLIVETQ----GAVQLVDV 350 (646)
Q Consensus 333 VV~~~L~~~~----~~~elv~~ 350 (646)
+.+.+++..+ .++.+++.
T Consensus 139 v~~~i~e~~g~~~~~d~~v~~~ 160 (431)
T 3ojo_A 139 FVKPVIENLGFTIGEDIYLVHC 160 (431)
T ss_dssp THHHHHHTTTCCBTTTEEEEEC
T ss_pred HHHHHHHHcCCCcCCCeEEEEC
Confidence 8888887543 23556553
No 406
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=67.29 E-value=14 Score=36.38 Aligned_cols=130 Identities=9% Similarity=-0.065 Sum_probs=72.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHH-cCCCCeEEEecCCCCCccccccCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKR-LNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~r-lg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
|..||= .-|.|+...+++..+... ...|+.+|.+..+++.+.+.+.. .+..++.++..|.+...........
T Consensus 8 ~k~~lV-TGas~GIG~aia~~l~~~------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 80 (265)
T 3lf2_A 8 EAVAVV-TGGSSGIGLATVELLLEA------GAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEA 80 (265)
T ss_dssp TCEEEE-ETCSSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEE-eCCCChHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHH
Confidence 445554 445677888888877532 34799999999998888877765 5555578888888764321100000
Q ss_pred CCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhh----hhHHHHHHHHHHHHHhhcc--CCeEEEE
Q psy17365 257 GNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGN----NLHGIQYRIVKRGVEMLAV--GGKIAYS 321 (646)
Q Consensus 257 g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~----~l~~lQ~~IL~~A~~lLKp--GG~LVYS 321 (646)
-.......|.++..+--+..+.+. ..+.++.. ....-...+++.++..++. +|++|+.
T Consensus 81 ~~~~~g~id~lvnnAg~~~~~~~~-------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~i 144 (265)
T 3lf2_A 81 CERTLGCASILVNNAGQGRVSTFA-------ETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCV 144 (265)
T ss_dssp HHHHHCSCSEEEECCCCCCCBCTT-------TCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEE
T ss_pred HHHHcCCCCEEEECCCCCCCCCcc-------cCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEE
Confidence 000123689888866432222211 11222111 1112233556666776644 5777764
No 407
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=66.73 E-value=9 Score=39.98 Aligned_cols=96 Identities=17% Similarity=0.129 Sum_probs=54.3
Q ss_pred CCCCCeEEEEcCC--CchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccc
Q psy17365 175 VQTHHKVLDMCAA--PGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 175 ~~pg~~VLDmCAa--PGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~ 252 (646)
+++|++||=.+|+ -|..++|+|..+ ...|++.+ +..+++.+ +.+|...+ +..+...+.....
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~---------Ga~Vi~~~-~~~~~~~~----~~lGa~~v--~~~~~~~~~~~~~ 244 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW---------DAHVTAVC-SQDASELV----RKLGADDV--IDYKSGSVEEQLK 244 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT---------TCEEEEEE-CGGGHHHH----HHTTCSEE--EETTSSCHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC---------CCEEEEEe-ChHHHHHH----HHcCCCEE--EECCchHHHHHHh
Confidence 7899999987742 344455555543 23788888 66776554 46786532 2222111111000
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEE
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAY 320 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVY 320 (646)
....+|.|+- |+|... ..+..++++|++||++|.
T Consensus 245 -------~~~g~D~vid---~~g~~~------------------------~~~~~~~~~l~~~G~iv~ 278 (375)
T 2vn8_A 245 -------SLKPFDFILD---NVGGST------------------------ETWAPDFLKKWSGATYVT 278 (375)
T ss_dssp -------TSCCBSEEEE---SSCTTH------------------------HHHGGGGBCSSSCCEEEE
T ss_pred -------hcCCCCEEEE---CCCChh------------------------hhhHHHHHhhcCCcEEEE
Confidence 0135898774 444221 124566788999999884
No 408
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=66.68 E-value=7.8 Score=40.00 Aligned_cols=101 Identities=11% Similarity=0.040 Sum_probs=56.6
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCC
Q psy17365 176 QTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 176 ~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~ 255 (646)
++|+.++=+.+|.|+....+++++... ...|++.|.+++|++.++ .+|... +++.+...+........
T Consensus 162 ~~g~~~vli~gg~g~vG~~a~qla~~~------Ga~Vi~~~~~~~~~~~~~----~~Ga~~--~~~~~~~~~~~~v~~~~ 229 (349)
T 3pi7_A 162 QEGEKAFVMTAGASQLCKLIIGLAKEE------GFRPIVTVRRDEQIALLK----DIGAAH--VLNEKAPDFEATLREVM 229 (349)
T ss_dssp HHCCSEEEESSTTSHHHHHHHHHHHHH------TCEEEEEESCGGGHHHHH----HHTCSE--EEETTSTTHHHHHHHHH
T ss_pred hCCCCEEEEeCCCcHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHH----HcCCCE--EEECCcHHHHHHHHHHh
Confidence 566444446667776665555544321 238999999999987764 467653 23332222211000000
Q ss_pred CCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
. ...+|.|+- |+|. ..+..++++|++||++|..
T Consensus 230 ~----~~g~D~vid---~~g~--------------------------~~~~~~~~~l~~~G~iv~~ 262 (349)
T 3pi7_A 230 K----AEQPRIFLD---AVTG--------------------------PLASAIFNAMPKRARWIIY 262 (349)
T ss_dssp H----HHCCCEEEE---SSCH--------------------------HHHHHHHHHSCTTCEEEEC
T ss_pred c----CCCCcEEEE---CCCC--------------------------hhHHHHHhhhcCCCEEEEE
Confidence 0 125897764 4442 1246688999999999853
No 409
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=65.99 E-value=11 Score=36.94 Aligned_cols=88 Identities=11% Similarity=-0.062 Sum_probs=54.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHc--CCCCeEEEecCCCCCccccccCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRL--NSPCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rl--g~~ni~v~~~Da~~~p~~~~~~~ 255 (646)
+..||= .-|.|+...+++..+... ...|+..+.+..+++.+.+.+... +...+.++..|.+..........
T Consensus 7 ~k~~lV-TGas~GIG~aia~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 79 (250)
T 3nyw_A 7 KGLAII-TGASQGIGAVIAAGLATD------GYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIK 79 (250)
T ss_dssp CCEEEE-ESTTSHHHHHHHHHHHHH------TCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHH
T ss_pred CCEEEE-ECCCcHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHH
Confidence 445554 455677888888877532 347999999999998888877765 33567788888876432110000
Q ss_pred CCCCCCCCCCeeecCCC
Q psy17365 256 DGNKVPMKFDRVLCDVP 272 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~P 272 (646)
.-.......|.++..+-
T Consensus 80 ~~~~~~g~iD~lvnnAg 96 (250)
T 3nyw_A 80 DIHQKYGAVDILVNAAA 96 (250)
T ss_dssp HHHHHHCCEEEEEECCC
T ss_pred HHHHhcCCCCEEEECCC
Confidence 00001236898888664
No 410
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=65.70 E-value=16 Score=35.92 Aligned_cols=88 Identities=14% Similarity=0.002 Sum_probs=57.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
|.+|| +.-|.|+...+++..+... ...|+.++.+..+++.+.+.++..+..++.++..|.+...........-
T Consensus 10 ~k~vl-VTGas~gIG~aia~~l~~~------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (262)
T 3pk0_A 10 GRSVV-VTGGTKGIGRGIATVFARA------GANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRA 82 (262)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 45565 5556688888888877532 3479999999999988888887776567888889987643211000000
Q ss_pred CCCCCCCCeeecCCC
Q psy17365 258 NKVPMKFDRVLCDVP 272 (646)
Q Consensus 258 ~~~~~~FD~IL~D~P 272 (646)
.......|.++..+-
T Consensus 83 ~~~~g~id~lvnnAg 97 (262)
T 3pk0_A 83 VEEFGGIDVVCANAG 97 (262)
T ss_dssp HHHHSCCSEEEECCC
T ss_pred HHHhCCCCEEEECCC
Confidence 001236898888663
No 411
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=65.60 E-value=8.8 Score=39.74 Aligned_cols=56 Identities=14% Similarity=0.076 Sum_probs=31.9
Q ss_pred cCCCCC-CeEEEEcC--CCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCe
Q psy17365 173 LDVQTH-HKVLDMCA--APGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCA 237 (646)
Q Consensus 173 Ld~~pg-~~VLDmCA--aPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni 237 (646)
.++++| ++||=.+| +-|..++|+|..++ ..|++...+...+......++.+|...+
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~G---------a~vi~~~~~~~~~~~~~~~~~~lGa~~v 220 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLN---------FNSISVIRDRPNLDEVVASLKELGATQV 220 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHHT---------CEEEEEECCCTTHHHHHHHHHHHTCSEE
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHCC---------CEEEEEecCccccHHHHHHHHhcCCeEE
Confidence 368899 99997665 23455666666542 3566665444332222223456787643
No 412
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=65.46 E-value=3.2 Score=42.20 Aligned_cols=70 Identities=14% Similarity=0.069 Sum_probs=47.2
Q ss_pred CCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHHHHHHHHHc
Q psy17365 262 MKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAVIQRLIVET 341 (646)
Q Consensus 262 ~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~VV~~~L~~~ 341 (646)
++||.|++++. |=.++- +-..-..-+-.-.-+-..|+..|+|||.+|...-.+.---.|.||..+.+++
T Consensus 210 grYDlVfvNv~-----TpyR~H------HYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE~vV~alARkF 278 (324)
T 3trk_A 210 GRYDLVVINIH-----TPFRIH------HYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVLGRKF 278 (324)
T ss_dssp CCEEEEEEECC-----CCCCSS------HHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTE
T ss_pred CceeEEEEecC-----Cccccc------hHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccccchHHHHHHHHhhh
Confidence 68999999975 111110 1111122222223456789999999999999888888888899999887765
Q ss_pred c
Q psy17365 342 Q 342 (646)
Q Consensus 342 ~ 342 (646)
.
T Consensus 279 ~ 279 (324)
T 3trk_A 279 R 279 (324)
T ss_dssp E
T ss_pred e
Confidence 4
No 413
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=63.53 E-value=2.3 Score=44.09 Aligned_cols=100 Identities=14% Similarity=0.140 Sum_probs=50.8
Q ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccc
Q psy17365 173 LDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLY 252 (646)
Q Consensus 173 Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~ 252 (646)
.++++|++||=.+|+ |+....++++.... +...|++.+ +..+.+.+ + +|...+ ++.+ ..+.....
T Consensus 138 ~~~~~g~~VlV~Ga~-G~vG~~a~qla~~~-----g~~~V~~~~-~~~~~~~~----~-~ga~~~--~~~~-~~~~~~~~ 202 (349)
T 4a27_A 138 ANLREGMSVLVHSAG-GGVGQAVAQLCSTV-----PNVTVFGTA-STFKHEAI----K-DSVTHL--FDRN-ADYVQEVK 202 (349)
T ss_dssp SCCCTTCEEEESSTT-SHHHHHHHHHHTTS-----TTCEEEEEE-CGGGHHHH----G-GGSSEE--EETT-SCHHHHHH
T ss_pred cCCCCCCEEEEEcCC-cHHHHHHHHHHHHc-----CCcEEEEeC-CHHHHHHH----H-cCCcEE--EcCC-ccHHHHHH
Confidence 468899999977663 44444444333210 245788888 55554443 2 676533 2222 11111000
Q ss_pred cCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEE
Q psy17365 253 TDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYS 321 (646)
Q Consensus 253 ~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYS 321 (646)
... ...+|.|+- |+|.. .+..++++|++||++|..
T Consensus 203 -~~~----~~g~Dvv~d---~~g~~--------------------------~~~~~~~~l~~~G~~v~~ 237 (349)
T 4a27_A 203 -RIS----AEGVDIVLD---CLCGD--------------------------NTGKGLSLLKPLGTYILY 237 (349)
T ss_dssp -HHC----TTCEEEEEE---ECC---------------------------------CTTEEEEEEEEEE
T ss_pred -Hhc----CCCceEEEE---CCCch--------------------------hHHHHHHHhhcCCEEEEE
Confidence 000 136897774 44422 135578899999999853
No 414
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=63.34 E-value=20 Score=34.50 Aligned_cols=133 Identities=14% Similarity=0.086 Sum_probs=74.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCC--CCCccccccC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDA--SVMPNVLYTD 254 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da--~~~p~~~~~~ 254 (646)
.|.+|| +.-|.|+...+++..+... ...|++.+.+..+++.+.+.++..+..++.++..|. +.........
T Consensus 13 ~~k~vl-ITGas~gIG~~ia~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~ 85 (247)
T 3i1j_A 13 KGRVIL-VTGAARGIGAAAARAYAAH------GASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELA 85 (247)
T ss_dssp TTCEEE-ESSTTSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHH
T ss_pred CCCEEE-EeCCCChHHHHHHHHHHHC------CCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHH
Confidence 355666 5556788888888887632 347999999999999998888888766677776665 3221100000
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhh----hHHHHHHHHHHHHHhhcc--CCeEEEEc
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNN----LHGIQYRIVKRGVEMLAV--GGKIAYST 322 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~----l~~lQ~~IL~~A~~lLKp--GG~LVYST 322 (646)
..-.......|.++..+-..+... .+...+.++... ...-...+++.++.+++. +|++|+.+
T Consensus 86 ~~~~~~~g~id~lv~nAg~~~~~~------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~is 153 (247)
T 3i1j_A 86 ARVEHEFGRLDGLLHNASIIGPRT------PLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTS 153 (247)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCS------CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEEC
T ss_pred HHHHHhCCCCCEEEECCccCCCCC------CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEc
Confidence 000001236899888764322110 011112221111 112233566667776643 57888754
No 415
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=63.24 E-value=15 Score=37.44 Aligned_cols=88 Identities=6% Similarity=-0.031 Sum_probs=55.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEecCCCCCccccccCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS-PCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~-~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
|.+||=.+ |+|+...+++..+... ...|++.+.+..+++.+.+.+...+. .++.++..|.+....+......
T Consensus 8 ~k~vlVTG-as~gIG~~la~~l~~~------G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 80 (319)
T 3ioy_A 8 GRTAFVTG-GANGVGIGLVRQLLNQ------GCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADE 80 (319)
T ss_dssp TCEEEEET-TTSTHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEcC-CchHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 55676555 5577888888887532 34799999999999888887776654 2578888898764221100000
Q ss_pred CCCCCCCCCeeecCCC
Q psy17365 257 GNKVPMKFDRVLCDVP 272 (646)
Q Consensus 257 g~~~~~~FD~IL~D~P 272 (646)
-.......|.|+..+-
T Consensus 81 ~~~~~g~id~lv~nAg 96 (319)
T 3ioy_A 81 VEARFGPVSILCNNAG 96 (319)
T ss_dssp HHHHTCCEEEEEECCC
T ss_pred HHHhCCCCCEEEECCC
Confidence 0001235798888763
No 416
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=63.07 E-value=14 Score=36.91 Aligned_cols=101 Identities=13% Similarity=0.044 Sum_probs=58.3
Q ss_pred ccccccccccCCCCCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecC
Q psy17365 164 AVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHD 243 (646)
Q Consensus 164 ~~Sml~~~~Ld~~pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~D 243 (646)
+.+|-....+++ .|.+||= .-|.|+...+++..+... ...|+.++.+..+++.+...+...+. ++.++..|
T Consensus 19 ~~~m~~~~~~~l-~gk~~lV-TGas~GIG~aia~~la~~------G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D 89 (276)
T 3r1i_A 19 PGSMSVLDLFDL-SGKRALI-TGASTGIGKKVALAYAEA------GAQVAVAARHSDALQVVADEIAGVGG-KALPIRCD 89 (276)
T ss_dssp ----CGGGGGCC-TTCEEEE-ESTTSHHHHHHHHHHHHT------TCEEEEEESSGGGGHHHHHHHHHTTC-CCEEEECC
T ss_pred CCCcccccccCC-CCCEEEE-eCCCCHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcC
Confidence 444433223333 3556664 455678888888877532 34799999999998888888777664 46777888
Q ss_pred CCCCccccccCCCCCCCCCCCCeeecCCCC
Q psy17365 244 ASVMPNVLYTDADGNKVPMKFDRVLCDVPC 273 (646)
Q Consensus 244 a~~~p~~~~~~~~g~~~~~~FD~IL~D~PC 273 (646)
.+...........-.......|.++..+--
T Consensus 90 l~d~~~v~~~~~~~~~~~g~iD~lvnnAg~ 119 (276)
T 3r1i_A 90 VTQPDQVRGMLDQMTGELGGIDIAVCNAGI 119 (276)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 876432110000000012368998887643
No 417
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=63.01 E-value=25 Score=33.53 Aligned_cols=86 Identities=10% Similarity=-0.005 Sum_probs=53.0
Q ss_pred CeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHH-HcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 179 HKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAK-RLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 179 ~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~-rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
.+|| +.-|.|+...+++..+... ...|+..+.+..+++.+.+.+. ..+ ..+.++..|.+...........-
T Consensus 3 k~vl-ITGas~gIG~~ia~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~ 74 (235)
T 3l77_A 3 KVAV-ITGASRGIGEAIARALARD------GYALALGARSVDRLEKIAHELMQEQG-VEVFYHHLDVSKAESVEEFSKKV 74 (235)
T ss_dssp CEEE-EESCSSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTCHHHHHHHCC-H
T ss_pred CEEE-EECCCcHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHhhcC-CeEEEEEeccCCHHHHHHHHHHH
Confidence 3455 4456688888888887632 3468999999999888877765 334 45778888887643211000000
Q ss_pred CCCCCCCCeeecCCC
Q psy17365 258 NKVPMKFDRVLCDVP 272 (646)
Q Consensus 258 ~~~~~~FD~IL~D~P 272 (646)
.......|.++..+-
T Consensus 75 ~~~~g~id~li~~Ag 89 (235)
T 3l77_A 75 LERFGDVDVVVANAG 89 (235)
T ss_dssp HHHHSSCSEEEECCC
T ss_pred HHhcCCCCEEEECCc
Confidence 001136898888663
No 418
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=62.86 E-value=15 Score=36.12 Aligned_cols=87 Identities=11% Similarity=0.001 Sum_probs=54.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHH-cCCCCeEEEecCCCCCccccccCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKR-LNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~r-lg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
|.+|| +.-|.|+...+++..+... ...|+.++.+..+++.+...+.. .+ ..+.++..|.+...........
T Consensus 20 ~k~vl-VTGas~gIG~aia~~l~~~------G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~v~~~~~~ 91 (266)
T 4egf_A 20 GKRAL-ITGATKGIGADIARAFAAA------GARLVLSGRDVSELDAARRALGEQFG-TDVHTVAIDLAEPDAPAELARR 91 (266)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTSTTHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHH
Confidence 45565 5556678888888887632 34799999999998887777665 34 4577888888765322100000
Q ss_pred CCCCCCCCCeeecCCC
Q psy17365 257 GNKVPMKFDRVLCDVP 272 (646)
Q Consensus 257 g~~~~~~FD~IL~D~P 272 (646)
-.......|.++..+-
T Consensus 92 ~~~~~g~id~lv~nAg 107 (266)
T 4egf_A 92 AAEAFGGLDVLVNNAG 107 (266)
T ss_dssp HHHHHTSCSEEEEECC
T ss_pred HHHHcCCCCEEEECCC
Confidence 0001236898888764
No 419
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=62.55 E-value=25 Score=38.54 Aligned_cols=134 Identities=14% Similarity=0.110 Sum_probs=72.6
Q ss_pred CeEEEEcCCCchHHHHHHHHhhhcCCCCCCC-c--EEEEEcCCHH----HHHHHHHHHHHc---------------CCCC
Q psy17365 179 HKVLDMCAAPGSKTAQIIEMIHAADSNPVPS-G--LVVANDVDNN----RCYMLVHQAKRL---------------NSPC 236 (646)
Q Consensus 179 ~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~-G--~VvA~Dis~~----Rl~~L~~n~~rl---------------g~~n 236 (646)
++|-=+++| ...+.+|..+. .. | .|+++|+++. +++.+.+..... ...+
T Consensus 19 mkIaVIGlG--~mG~~lA~~la-------~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~ 89 (478)
T 3g79_A 19 KKIGVLGMG--YVGIPAAVLFA-------DAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGK 89 (478)
T ss_dssp CEEEEECCS--TTHHHHHHHHH-------HSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTC
T ss_pred CEEEEECcC--HHHHHHHHHHH-------HhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCC
Confidence 456555554 44455555554 13 4 5999999999 887765411000 0122
Q ss_pred eEEEecCCCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCC
Q psy17365 237 AIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGG 316 (646)
Q Consensus 237 i~v~~~Da~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG 316 (646)
+.++. |... ....|.|++-+|-..+..-.+.||+ ..+ ...++...+.|++|-
T Consensus 90 l~~tt-d~ea--------------~~~aDvViiaVptp~~~~~~~~~dl---------~~v----~~~~~~i~~~l~~g~ 141 (478)
T 3g79_A 90 FECTP-DFSR--------------ISELDAVTLAIQTPFANPKDLEPDF---------SAL----IDGIRNVGKYLKPGM 141 (478)
T ss_dssp EEEES-CGGG--------------GGGCSEEEECCCCCCCSSCCSSCCC---------HHH----HHHHHHHHHHCCTTC
T ss_pred eEEeC-cHHH--------------HhcCCEEEEecCCchhccCCccccH---------HHH----HHHHHHHHhhcCCCc
Confidence 33321 2111 1357999998873321100001333 111 133455667788877
Q ss_pred eEEEEcCCCCccccHHHHHHHHH-Hcc----CcEEEeec
Q psy17365 317 KIAYSTCSLNPLEDEAVIQRLIV-ETQ----GAVQLVDV 350 (646)
Q Consensus 317 ~LVYSTCSl~p~ENE~VV~~~L~-~~~----~~~elv~~ 350 (646)
.+|+. .|+.|.-.+.+...+++ ..+ .++.+++.
T Consensus 142 iVV~~-STv~pgtt~~v~~~ile~~~g~~~~~d~~v~~~ 179 (478)
T 3g79_A 142 LVVLE-STITPGTTEGMAKQILEEESGLKAGEDFALAHA 179 (478)
T ss_dssp EEEEC-SCCCTTTTTTHHHHHHHHHHCCCBTTTBEEEEC
T ss_pred EEEEe-CCCChHHHHHHHHHHHHHhcCCCcCCceeEEeC
Confidence 77765 48999999989888884 343 13555553
No 420
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=62.49 E-value=28 Score=30.68 Aligned_cols=72 Identities=13% Similarity=-0.006 Sum_probs=45.5
Q ss_pred eEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCCCC
Q psy17365 180 KVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADGNK 259 (646)
Q Consensus 180 ~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g~~ 259 (646)
+|+=+| -|.....+++.+... .-.|+++|.++++++.+.. .| +.++.+|++....+.. .+
T Consensus 9 ~viIiG--~G~~G~~la~~L~~~------g~~v~vid~~~~~~~~~~~----~g---~~~i~gd~~~~~~l~~---a~-- 68 (140)
T 3fwz_A 9 HALLVG--YGRVGSLLGEKLLAS------DIPLVVIETSRTRVDELRE----RG---VRAVLGNAANEEIMQL---AH-- 68 (140)
T ss_dssp CEEEEC--CSHHHHHHHHHHHHT------TCCEEEEESCHHHHHHHHH----TT---CEEEESCTTSHHHHHH---TT--
T ss_pred CEEEEC--cCHHHHHHHHHHHHC------CCCEEEEECCHHHHHHHHH----cC---CCEEECCCCCHHHHHh---cC--
Confidence 455444 477888888887531 3479999999999877653 34 4677888865322110 01
Q ss_pred CCCCCCeeecCCC
Q psy17365 260 VPMKFDRVLCDVP 272 (646)
Q Consensus 260 ~~~~FD~IL~D~P 272 (646)
...+|.|++-.|
T Consensus 69 -i~~ad~vi~~~~ 80 (140)
T 3fwz_A 69 -LECAKWLILTIP 80 (140)
T ss_dssp -GGGCSEEEECCS
T ss_pred -cccCCEEEEECC
Confidence 246888887544
No 421
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=62.19 E-value=37 Score=32.47 Aligned_cols=87 Identities=14% Similarity=0.102 Sum_probs=54.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
+.+|| +.-|.|+...+++..+... ...|++++.+..++..+.+.++..+. ++.++..|.+...........-
T Consensus 11 ~~~vl-VtGasggiG~~la~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~ 82 (255)
T 1fmc_A 11 GKCAI-ITGAGAGIGKEIAITFATA------GASVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSALADFA 82 (255)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHTT------TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEE-EECCccHHHHHHHHHHHHC------CCEEEEEcCCHHHHHHHHHHHHHhCC-ceEEEEcCCCCHHHHHHHHHHH
Confidence 45565 5567789999999887621 34799999999988877777766553 5677788877532211000000
Q ss_pred CCCCCCCCeeecCCC
Q psy17365 258 NKVPMKFDRVLCDVP 272 (646)
Q Consensus 258 ~~~~~~FD~IL~D~P 272 (646)
......+|.|+..+-
T Consensus 83 ~~~~~~~d~vi~~Ag 97 (255)
T 1fmc_A 83 ISKLGKVDILVNNAG 97 (255)
T ss_dssp HHHHSSCCEEEECCC
T ss_pred HHhcCCCCEEEECCC
Confidence 000136899888654
No 422
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=62.09 E-value=96 Score=30.16 Aligned_cols=62 Identities=15% Similarity=0.097 Sum_probs=44.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcC-CHHHHHHHHHHHHHc-CCCCeEEEecCCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDV-DNNRCYMLVHQAKRL-NSPCAIITNHDASVM 247 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Di-s~~Rl~~L~~n~~rl-g~~ni~v~~~Da~~~ 247 (646)
|..|| +.-|.|+...+++..+... ...|++++. +..+++.+...+... + .++.++..|.+..
T Consensus 11 ~k~~l-VTGas~gIG~~ia~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~ 74 (276)
T 1mxh_A 11 CPAAV-ITGGARRIGHSIAVRLHQQ------GFRVVVHYRHSEGAAQRLVAELNAARA-GSAVLCKGDLSLS 74 (276)
T ss_dssp CCEEE-ETTCSSHHHHHHHHHHHHT------TCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSS
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHC------CCEEEEEeCCChHHHHHHHHHHHHhcC-CceEEEeccCCCc
Confidence 44566 6667788999999887532 347999999 888888777766554 4 4577788888765
No 423
>2p38_A Protein involved in ribosomal biogenesis; two alpha/beta domains, PUA domain, biosynthetic protein; 1.80A {Pyrococcus abyssi}
Probab=61.30 E-value=33 Score=32.21 Aligned_cols=131 Identities=14% Similarity=0.088 Sum_probs=85.9
Q ss_pred hhhhhHhhhCCCCCCCCCceee-eccCCCcCEEEEcChhhHHHHhhCCCCceEEeCceeeEEE--ecCCCCccceeeccc
Q psy17365 468 VWPPIRDFYEISPSLPVDCLLT-RCLVGKKKIIYFTSPMVKNIIQSNENNLKIINTGVKSFAR--CDNKVMGCAFRFCQE 544 (646)
Q Consensus 468 ~~~~i~~~ygi~~~f~~~~~~~-R~~~g~~~~iy~~s~~~~~i~~~~~~~lkiv~~Gvk~F~r--~~~~~~~c~~Ri~~e 544 (646)
+++.+.+| + . +..+++.+ |. ...+|||++..+.+.+.+ . +.++++.|+-+=.- .+++.. .||++-+
T Consensus 18 i~~~L~~y-~-~--~~~~~~~~~~~---~~~~Vy~v~~~~~~~~~~-~-~~~l~s~G~~~Gk~~~~~t~~~--kf~pti~ 86 (166)
T 2p38_A 18 ILKEAEKY-G-E--LLHEFFCVVEG---KYRDVYAVNEEVWKIIED-I-NMRPYSLGTFVGTIRVDENLVE--KFYPNLE 86 (166)
T ss_dssp HHHHHHTT-E-E--ECCCCEEEEES---SSEEEEEECHHHHHHTTT-C-CCCGGGTEEEEEEEEECTTSCE--EEEECHH
T ss_pred HHHHHHHh-c-C--CCcccEEEEEc---cCcEEEEECcHHHHHhhc-c-CccceEEEEEEEEEEecccCCC--eEEEehH
Confidence 45556554 3 2 23344443 33 357899999998887654 3 77888999655333 112222 5999999
Q ss_pred hhHHHhhhhCCCcEEEeCHHHHHHHHhcCCCCCCccccccCHHHHhhhcccCCCCccEEEEEec-CCCeEEEEe----ee
Q psy17365 545 GLSSMKAFIGEKRKVRVNREELITILNNSTPEQPTDLELLRPETRQTLTREGFGVGSCLLELQD-DLPLSLVGW----RG 619 (646)
Q Consensus 545 g~~~l~~~~~~kr~v~~~~~~~~~ll~~~~p~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~-~~~~~~~~w----~g 619 (646)
|+..+ ++ .+.+|-+.......+|.......| .+.+.+ ...|..|++++. +.++.++.+ +|
T Consensus 87 ~l~~l-~~--~k~kV~V~~~ae~~flyG~dV~k~-gI~~~~-----------~~~~~~VvV~~~~~~pLG~G~a~~s~~g 151 (166)
T 2p38_A 87 FFSLI-KL--EKNYVILGPKASFLFTTGKDAPKE-AVREIK-----------WQGSKRVVVLNDLGDIIGIGLINPKSDR 151 (166)
T ss_dssp HHTTE-EE--CSSEEEECHHHHHHHHTTCCBCGG-GEEEEE-----------CSSCSEEEEECTTSCEEEEEEECTTCST
T ss_pred Hhhhc-cc--cccEEEECCcceEeeecCCCcchh-cceEEe-----------ecCCCEEEEEECCCcEEEEEEEEECCCC
Confidence 99999 65 567888999988989887665411 132221 356777888776 677888888 67
Q ss_pred cccee
Q psy17365 620 KSSVR 624 (646)
Q Consensus 620 ~~s~~ 624 (646)
+.-.|
T Consensus 152 kvv~n 156 (166)
T 2p38_A 152 RFIKN 156 (166)
T ss_dssp TSEEE
T ss_pred EEEEE
Confidence 65444
No 424
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=60.85 E-value=32 Score=33.03 Aligned_cols=87 Identities=10% Similarity=0.014 Sum_probs=55.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
+.+|| +.-|.|+...+++..+... ...|++.+.+..+++.+...++..+. .+.++..|.+...........-
T Consensus 5 ~k~vl-ITGas~gIG~~~a~~l~~~------G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~ 76 (247)
T 3lyl_A 5 EKVAL-VTGASRGIGFEVAHALASK------GATVVGTATSQASAEKFENSMKEKGF-KARGLVLNISDIESIQNFFAEI 76 (247)
T ss_dssp TCEEE-ESSCSSHHHHHHHHHHHHT------TCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEE-EECCCChHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHH
Confidence 44555 5556788888888887632 34799999999999888888777664 4777888887643211000000
Q ss_pred CCCCCCCCeeecCCC
Q psy17365 258 NKVPMKFDRVLCDVP 272 (646)
Q Consensus 258 ~~~~~~FD~IL~D~P 272 (646)
.......|.|+..+-
T Consensus 77 ~~~~~~id~li~~Ag 91 (247)
T 3lyl_A 77 KAENLAIDILVNNAG 91 (247)
T ss_dssp HHTTCCCSEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 011246898888764
No 425
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=60.54 E-value=25 Score=34.25 Aligned_cols=89 Identities=9% Similarity=-0.044 Sum_probs=54.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCC--CCCccccccC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDA--SVMPNVLYTD 254 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da--~~~p~~~~~~ 254 (646)
.|..||= .-|.|+...+++..+... ...|+.+|.+..++..+.+.+...+...+.++..|. +.........
T Consensus 11 ~~k~vlV-TGas~gIG~aia~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 83 (252)
T 3f1l_A 11 NDRIILV-TGASDGIGREAAMTYARY------GATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLA 83 (252)
T ss_dssp TTCEEEE-ESTTSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHH
T ss_pred CCCEEEE-eCCCChHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHH
Confidence 3556664 445677888888877532 347999999999988888777766555667777787 4321110000
Q ss_pred CCCCCCCCCCCeeecCCC
Q psy17365 255 ADGNKVPMKFDRVLCDVP 272 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~P 272 (646)
..-.......|.++..+-
T Consensus 84 ~~~~~~~g~id~lv~nAg 101 (252)
T 3f1l_A 84 QRIAVNYPRLDGVLHNAG 101 (252)
T ss_dssp HHHHHHCSCCSEEEECCC
T ss_pred HHHHHhCCCCCEEEECCc
Confidence 000011246898888663
No 426
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=59.85 E-value=23 Score=34.25 Aligned_cols=87 Identities=13% Similarity=0.027 Sum_probs=55.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
|.+||= .-|.|+...+++..+... ...|++.|.+..++..+.+.++..+. .+.++..|.+...........-
T Consensus 9 ~k~vlI-TGas~giG~~~a~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~ 80 (253)
T 3qiv_A 9 NKVGIV-TGSGGGIGQAYAEALARE------GAAVVVADINAEAAEAVAKQIVADGG-TAISVAVDVSDPESAKAMADRT 80 (253)
T ss_dssp TCEEEE-ETTTSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEE-ECCCChHHHHHHHHHHHC------CCEEEEEcCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHH
Confidence 556664 455678888888887632 34799999999999888888776553 5677788887643211000000
Q ss_pred CCCCCCCCeeecCCC
Q psy17365 258 NKVPMKFDRVLCDVP 272 (646)
Q Consensus 258 ~~~~~~FD~IL~D~P 272 (646)
.......|.|+..+-
T Consensus 81 ~~~~g~id~li~~Ag 95 (253)
T 3qiv_A 81 LAEFGGIDYLVNNAA 95 (253)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 001136899888763
No 427
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=59.23 E-value=23 Score=35.20 Aligned_cols=88 Identities=8% Similarity=-0.078 Sum_probs=53.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHc----CCCCeEEEecCCCCCcccccc
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRL----NSPCAIITNHDASVMPNVLYT 253 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rl----g~~ni~v~~~Da~~~p~~~~~ 253 (646)
|.+||=.+ |.|+...+++..+... ...|++++.+..++..+...+... .-.++.++..|.+........
T Consensus 18 ~k~vlVTG-asggIG~~la~~l~~~------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 90 (303)
T 1yxm_A 18 GQVAIVTG-GATGIGKAIVKELLEL------GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNL 90 (303)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHH
Confidence 55677544 5688888998887532 347999999998888777766541 123577888888764221100
Q ss_pred CCCCCCCCCCCCeeecCCC
Q psy17365 254 DADGNKVPMKFDRVLCDVP 272 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~P 272 (646)
...-......+|.|+..+-
T Consensus 91 ~~~~~~~~g~id~li~~Ag 109 (303)
T 1yxm_A 91 VKSTLDTFGKINFLVNNGG 109 (303)
T ss_dssp HHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHcCCCCEEEECCC
Confidence 0000000135899888664
No 428
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=59.02 E-value=26 Score=34.51 Aligned_cols=87 Identities=10% Similarity=-0.031 Sum_probs=54.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
+.+|| +.-|.|+...+++..+... ...|++++.+..++..+...++..+. ++.++..|.+...........-
T Consensus 31 ~k~vl-ITGasggIG~~la~~L~~~------G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~ 102 (272)
T 1yb1_A 31 GEIVL-ITGAGHGIGRLTAYEFAKL------KSKLVLWDINKHGLEETAAKCKGLGA-KVHTFVVDCSNREDIYSSAKKV 102 (272)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEE-EECCCchHHHHHHHHHHHC------CCEEEEEEcCHHHHHHHHHHHHhcCC-eEEEEEeeCCCHHHHHHHHHHH
Confidence 45666 4556688888998887532 34799999999988887777766653 5777888887642211000000
Q ss_pred CCCCCCCCeeecCCC
Q psy17365 258 NKVPMKFDRVLCDVP 272 (646)
Q Consensus 258 ~~~~~~FD~IL~D~P 272 (646)
......+|.|+..+-
T Consensus 103 ~~~~g~iD~li~~Ag 117 (272)
T 1yb1_A 103 KAEIGDVSILVNNAG 117 (272)
T ss_dssp HHHTCCCSEEEECCC
T ss_pred HHHCCCCcEEEECCC
Confidence 001236899988764
No 429
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=58.76 E-value=25 Score=34.32 Aligned_cols=87 Identities=9% Similarity=-0.067 Sum_probs=53.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
|.+|| +.-|.|+...+++..+... ...|++++.+..++..+...+...+. ++.++..|.+...........-
T Consensus 9 ~k~vl-VTGas~giG~~ia~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~ 80 (260)
T 2ae2_A 9 GCTAL-VTGGSRGIGYGIVEELASL------GASVYTCSRNQKELNDCLTQWRSKGF-KVEASVCDLSSRSERQELMNTV 80 (260)
T ss_dssp TCEEE-EESCSSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHH
Confidence 55676 4455788888888877532 34799999999988777766665543 4677788877542211000000
Q ss_pred CCCC-CCCCeeecCCC
Q psy17365 258 NKVP-MKFDRVLCDVP 272 (646)
Q Consensus 258 ~~~~-~~FD~IL~D~P 272 (646)
.... ...|.++..+-
T Consensus 81 ~~~~~g~id~lv~~Ag 96 (260)
T 2ae2_A 81 ANHFHGKLNILVNNAG 96 (260)
T ss_dssp HHHTTTCCCEEEECCC
T ss_pred HHHcCCCCCEEEECCC
Confidence 0001 46898888663
No 430
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=58.56 E-value=9.3 Score=37.56 Aligned_cols=128 Identities=9% Similarity=0.087 Sum_probs=72.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
.|.+||=.+ |.|+...+++..+... ...|+..|.+..+++.+.+.+ + .++.++..|.+...........
T Consensus 7 ~gk~~lVTG-as~gIG~a~a~~l~~~------G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~~~~~v~~~~~~ 75 (255)
T 4eso_A 7 QGKKAIVIG-GTHGMGLATVRRLVEG------GAEVLLTGRNESNIARIREEF---G-PRVHALRSDIADLNEIAVLGAA 75 (255)
T ss_dssp TTCEEEEET-CSSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHH---G-GGEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHh---C-CcceEEEccCCCHHHHHHHHHH
Confidence 355666555 5677888888877532 347999999998887766554 3 3567788888764321100000
Q ss_pred CCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhh----hHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 257 GNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNN----LHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 257 g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~----l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
-.......|.++..+-.+..+.+. ..+.++... ...-...+++.++..++.+|++|+.+
T Consensus 76 ~~~~~g~id~lv~nAg~~~~~~~~-------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 76 AGQTLGAIDLLHINAGVSELEPFD-------QVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp HHHHHSSEEEEEECCCCCCCBCGG-------GCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHHHhCCCCEEEECCCCCCCCChh-------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 000123689888766433332221 112222111 11223456677778888889998764
No 431
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=58.51 E-value=27 Score=35.07 Aligned_cols=88 Identities=9% Similarity=-0.023 Sum_probs=54.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC--CeEEEecCCCCCccccccCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP--CAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~--ni~v~~~Da~~~p~~~~~~~ 255 (646)
|..|| +.-|.|+...+++..+... ...|++++.+..+++.+...+...+.. ++.++..|.+..........
T Consensus 26 ~k~vl-VTGas~gIG~aia~~L~~~------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 98 (297)
T 1xhl_A 26 GKSVI-ITGSSNGIGRSAAVIFAKE------GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIIN 98 (297)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHH
Confidence 44555 5566788888888887532 347999999999888877777665542 57778888876422110000
Q ss_pred CCCCCCCCCCeeecCCC
Q psy17365 256 DGNKVPMKFDRVLCDVP 272 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~P 272 (646)
.-.......|.|+..+-
T Consensus 99 ~~~~~~g~iD~lvnnAG 115 (297)
T 1xhl_A 99 TTLAKFGKIDILVNNAG 115 (297)
T ss_dssp HHHHHHSCCCEEEECCC
T ss_pred HHHHhcCCCCEEEECCC
Confidence 00001136898888764
No 432
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=58.46 E-value=50 Score=33.00 Aligned_cols=91 Identities=8% Similarity=-0.086 Sum_probs=54.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcC-CCCeEEEecCCCCCccccccCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLN-SPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg-~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
|.+||=.+ |.||...++|..+..... ..-.|+..+.+..+++.+.+.+.... -..+.++..|.+...........
T Consensus 33 ~k~~lVTG-as~GIG~aia~~l~~~G~---~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 108 (287)
T 3rku_A 33 KKTVLITG-ASAGIGKATALEYLEASN---GDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN 108 (287)
T ss_dssp TCEEEEES-TTSHHHHHHHHHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred CCEEEEec-CCChHHHHHHHHHHHcCC---CCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 55666555 557778888876642100 01289999999999988887776542 34577888888764322110000
Q ss_pred CCCCCCCCCeeecCCC
Q psy17365 257 GNKVPMKFDRVLCDVP 272 (646)
Q Consensus 257 g~~~~~~FD~IL~D~P 272 (646)
-.......|.++..+-
T Consensus 109 ~~~~~g~iD~lVnnAG 124 (287)
T 3rku_A 109 LPQEFKDIDILVNNAG 124 (287)
T ss_dssp SCGGGCSCCEEEECCC
T ss_pred HHHhcCCCCEEEECCC
Confidence 0112246898888663
No 433
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=58.40 E-value=29 Score=33.90 Aligned_cols=88 Identities=11% Similarity=-0.000 Sum_probs=55.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
.|..|| +.-|.|+...+++..+... ...|++.+.+..+++.+.+.+...+. ++.++..|.+...........
T Consensus 28 ~~k~vl-ITGas~gIG~~la~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~ 99 (262)
T 3rkr_A 28 SGQVAV-VTGASRGIGAAIARKLGSL------GARVVLTARDVEKLRAVEREIVAAGG-EAESHACDLSHSDAIAAFATG 99 (262)
T ss_dssp TTCEEE-ESSTTSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEE-EECCCChHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHHHHhCC-ceeEEEecCCCHHHHHHHHHH
Confidence 355666 4556688888888887632 34799999999999888888777653 577888888764321100000
Q ss_pred CCCCCCCCCeeecCCC
Q psy17365 257 GNKVPMKFDRVLCDVP 272 (646)
Q Consensus 257 g~~~~~~FD~IL~D~P 272 (646)
-.......|.|+..+-
T Consensus 100 ~~~~~g~id~lv~~Ag 115 (262)
T 3rkr_A 100 VLAAHGRCDVLVNNAG 115 (262)
T ss_dssp HHHHHSCCSEEEECCC
T ss_pred HHHhcCCCCEEEECCC
Confidence 0001236898888654
No 434
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=58.24 E-value=21 Score=35.00 Aligned_cols=87 Identities=11% Similarity=-0.036 Sum_probs=53.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
|.+|| +.-|.|+...+++..+... ...|++++.+..+++.+...+...+. ++.++..|.+...........-
T Consensus 7 ~k~vl-VTGas~gIG~~ia~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~ 78 (262)
T 1zem_A 7 GKVCL-VTGAGGNIGLATALRLAEE------GTAIALLDMNREALEKAEASVREKGV-EARSYVCDVTSEEAVIGTVDSV 78 (262)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHTTTS-CEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHH
Confidence 55666 4555678888888887532 34789999999888877776665543 4677788876542211000000
Q ss_pred CCCCCCCCeeecCCC
Q psy17365 258 NKVPMKFDRVLCDVP 272 (646)
Q Consensus 258 ~~~~~~FD~IL~D~P 272 (646)
.......|.++..+-
T Consensus 79 ~~~~g~id~lv~nAg 93 (262)
T 1zem_A 79 VRDFGKIDFLFNNAG 93 (262)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHhCCCCEEEECCC
Confidence 001236898888763
No 435
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=58.14 E-value=9.8 Score=42.49 Aligned_cols=71 Identities=13% Similarity=0.215 Sum_probs=46.7
Q ss_pred CCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHHHHHHHHH
Q psy17365 261 PMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAVIQRLIVE 340 (646)
Q Consensus 261 ~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~VV~~~L~~ 340 (646)
..+||.|++|+. ..+|.+ +-..-...+-.-.-|-..|+.+|+|||.+|...--+.---.|.||..+-++
T Consensus 219 ~~ryDlvfvn~~----t~yr~H-------HyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyADr~sE~vv~alaRk 287 (670)
T 4gua_A 219 QARYDLVFINIG----TKYRNH-------HFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYADRNSEDVVTALARK 287 (670)
T ss_dssp CCCEEEEEECCC----CCCCSC-------HHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCSHHHHHHHHHHHHT
T ss_pred CCcccEEEEecC----CCcccc-------hHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeeccccchHHHHHHHHhh
Confidence 358999999974 111110 011111112222245668999999999999888888888889999988877
Q ss_pred cc
Q psy17365 341 TQ 342 (646)
Q Consensus 341 ~~ 342 (646)
+.
T Consensus 288 F~ 289 (670)
T 4gua_A 288 FV 289 (670)
T ss_dssp EE
T ss_pred ee
Confidence 64
No 436
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=57.99 E-value=26 Score=34.03 Aligned_cols=85 Identities=14% Similarity=0.090 Sum_probs=51.9
Q ss_pred eEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCCCC
Q psy17365 180 KVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADGNK 259 (646)
Q Consensus 180 ~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g~~ 259 (646)
.|| +.-|.|+...+++..+... ...|++.+.+..+++.+.+.+...+. ++.++..|.+...........-..
T Consensus 4 ~vl-VTGas~gIG~~ia~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~ 75 (256)
T 1geg_A 4 VAL-VTGAGQGIGKAIALRLVKD------GFAVAIADYNDATAKAVASEINQAGG-HAVAVKVDVSDRDQVFAAVEQARK 75 (256)
T ss_dssp EEE-EETTTSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHH
T ss_pred EEE-EECCCChHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHH
Confidence 444 4456688888888877532 34799999999888877776665553 467777887763221100000000
Q ss_pred CCCCCCeeecCCC
Q psy17365 260 VPMKFDRVLCDVP 272 (646)
Q Consensus 260 ~~~~FD~IL~D~P 272 (646)
.....|.++..+-
T Consensus 76 ~~g~id~lv~nAg 88 (256)
T 1geg_A 76 TLGGFDVIVNNAG 88 (256)
T ss_dssp HTTCCCEEEECCC
T ss_pred HhCCCCEEEECCC
Confidence 1236898888663
No 437
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=57.10 E-value=15 Score=36.04 Aligned_cols=87 Identities=15% Similarity=0.068 Sum_probs=55.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
|.+|| +.-|.||...+++..+... ...|+++|.+..+++.+...++..+. ++.++..|.+...........-
T Consensus 7 ~k~vl-VTGas~GIG~aia~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~ 78 (252)
T 3h7a_A 7 NATVA-VIGAGDYIGAEIAKKFAAE------GFTVFAGRRNGEKLAPLVAEIEAAGG-RIVARSLDARNEDEVTAFLNAA 78 (252)
T ss_dssp SCEEE-EECCSSHHHHHHHHHHHHT------TCEEEEEESSGGGGHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEE-EECCCchHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECcCCCHHHHHHHHHHH
Confidence 44566 4455677888888877532 34799999999999888888877653 5778888887643211000000
Q ss_pred CCCCCCCCeeecCCCC
Q psy17365 258 NKVPMKFDRVLCDVPC 273 (646)
Q Consensus 258 ~~~~~~FD~IL~D~PC 273 (646)
... ...|.++..+-.
T Consensus 79 ~~~-g~id~lv~nAg~ 93 (252)
T 3h7a_A 79 DAH-APLEVTIFNVGA 93 (252)
T ss_dssp HHH-SCEEEEEECCCC
T ss_pred Hhh-CCceEEEECCCc
Confidence 001 367888876643
No 438
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=56.91 E-value=17 Score=36.33 Aligned_cols=88 Identities=10% Similarity=-0.068 Sum_probs=55.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
|..|| +.-|.|+...+++..+... ...|+++|.+..+++.+.+.+...+...+.++..|.+...........-
T Consensus 33 gk~~l-VTGas~GIG~aia~~la~~------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 105 (281)
T 4dry_A 33 GRIAL-VTGGGTGVGRGIAQALSAE------GYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAV 105 (281)
T ss_dssp -CEEE-ETTTTSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEE-EeCCCCHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 45555 5556788888898887532 3479999999999888887776655555677888887643211000000
Q ss_pred CCCCCCCCeeecCCC
Q psy17365 258 NKVPMKFDRVLCDVP 272 (646)
Q Consensus 258 ~~~~~~FD~IL~D~P 272 (646)
.......|.++..+-
T Consensus 106 ~~~~g~iD~lvnnAG 120 (281)
T 4dry_A 106 RAEFARLDLLVNNAG 120 (281)
T ss_dssp HHHHSCCSEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 001246898888663
No 439
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=56.81 E-value=34 Score=33.61 Aligned_cols=131 Identities=16% Similarity=0.143 Sum_probs=72.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcC-CHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDV-DNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Di-s~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
|.+|| +.-|.|+...+++..+... ...|+..+. +..+++.+.+.++..+. ++.++..|.+...........
T Consensus 18 ~k~~l-VTGas~gIG~aia~~l~~~------G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~ 89 (270)
T 3is3_A 18 GKVAL-VTGSGRGIGAAVAVHLGRL------GAKVVVNYANSTKDAEKVVSEIKALGS-DAIAIKADIRQVPEIVKLFDQ 89 (270)
T ss_dssp TCEEE-ESCTTSHHHHHHHHHHHHT------TCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEE-EECCCchHHHHHHHHHHHC------CCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHH
Confidence 55666 4555678888888877532 236766665 56677777777777653 467778888764321100000
Q ss_pred CCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhh----hhHHHHHHHHHHHHHhhccCCeEEEEcC
Q psy17365 257 GNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGN----NLHGIQYRIVKRGVEMLAVGGKIAYSTC 323 (646)
Q Consensus 257 g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~----~l~~lQ~~IL~~A~~lLKpGG~LVYSTC 323 (646)
-.......|.++..+--...+.+. ..+.++.. ....-...+++.++..++.+|++|+.+.
T Consensus 90 ~~~~~g~id~lvnnAg~~~~~~~~-------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 90 AVAHFGHLDIAVSNSGVVSFGHLK-------DVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HHHHHSCCCEEECCCCCCCCCCGG-------GCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHHcCCCCEEEECCCCCCCCCcc-------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 000123688888766433222211 11222111 1112234567788888888999997643
No 440
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=56.70 E-value=31 Score=34.15 Aligned_cols=132 Identities=11% Similarity=0.063 Sum_probs=72.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcC-CHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDV-DNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Di-s~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~ 255 (646)
.|.+||=.+ |.|+...+++..+... ...|+..+. +..+++.+...++..+. .+.++..|.+........-.
T Consensus 30 ~gk~~lVTG-as~GIG~aia~~la~~------G~~V~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~ 101 (271)
T 3v2g_A 30 AGKTAFVTG-GSRGIGAAIAKRLALE------GAAVALTYVNAAERAQAVVSEIEQAGG-RAVAIRADNRDAEAIEQAIR 101 (271)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHT------TCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHC------CCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHH
Confidence 355666555 5577888888877532 235666644 56777777777777664 46777888876432110000
Q ss_pred CCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhh----hHHHHHHHHHHHHHhhccCCeEEEEcC
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNN----LHGIQYRIVKRGVEMLAVGGKIAYSTC 323 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~----l~~lQ~~IL~~A~~lLKpGG~LVYSTC 323 (646)
.-.......|.++..+-....+.+. ..+.++... ...-...+++.++..++.+|++|+.+.
T Consensus 102 ~~~~~~g~iD~lvnnAg~~~~~~~~-------~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 102 ETVEALGGLDILVNSAGIWHSAPLE-------ETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGG-------GCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHHHcCCCcEEEECCCCCCCCChh-------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 0000123689888876433222211 112221111 112234567778888888999997644
No 441
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=56.52 E-value=27 Score=34.05 Aligned_cols=85 Identities=12% Similarity=0.103 Sum_probs=49.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEecCCCCCccccccCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS-PCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~-~ni~v~~~Da~~~p~~~~~~~ 255 (646)
.+.+|| +.-|.|+...+++..+... ...|++.+.+..+...+...+ +. .++.++..|.+..........
T Consensus 15 ~~k~vl-ITGasggiG~~~a~~l~~~------G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~ 84 (278)
T 2bgk_A 15 QDKVAI-ITGGAGGIGETTAKLFVRY------GAKVVIADIADDHGQKVCNNI---GSPDVISFVHCDVTKDEDVRNLVD 84 (278)
T ss_dssp TTCEEE-EESTTSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHH---CCTTTEEEEECCTTCHHHHHHHHH
T ss_pred cCCEEE-EECCCCHHHHHHHHHHHHC------CCEEEEEcCChhHHHHHHHHh---CCCCceEEEECCCCCHHHHHHHHH
Confidence 355677 4456788899998887532 347899999988766554433 22 257788888876432110000
Q ss_pred CCCCCCCCCCeeecCC
Q psy17365 256 DGNKVPMKFDRVLCDV 271 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~ 271 (646)
.-.......|.|+..+
T Consensus 85 ~~~~~~~~id~li~~A 100 (278)
T 2bgk_A 85 TTIAKHGKLDIMFGNV 100 (278)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 0000013589888765
No 442
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=56.47 E-value=26 Score=35.15 Aligned_cols=87 Identities=14% Similarity=-0.062 Sum_probs=53.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
|..||= .-|.|+...+++..+... ...|++++.+..+++.+...++..+. .+.++..|.+...........-
T Consensus 34 ~k~vlV-TGas~gIG~aia~~L~~~------G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~ 105 (291)
T 3cxt_A 34 GKIALV-TGASYGIGFAIASAYAKA------GATIVFNDINQELVDRGMAAYKAAGI-NAHGYVCDVTDEDGIQAMVAQI 105 (291)
T ss_dssp TCEEEE-ETCSSHHHHHHHHHHHHT------TCEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEE-eCCCcHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHH
Confidence 556664 455688888888877532 34799999999888877776665553 4667778877532211000000
Q ss_pred CCCCCCCCeeecCCC
Q psy17365 258 NKVPMKFDRVLCDVP 272 (646)
Q Consensus 258 ~~~~~~FD~IL~D~P 272 (646)
.......|.|+..+-
T Consensus 106 ~~~~g~iD~lvnnAg 120 (291)
T 3cxt_A 106 ESEVGIIDILVNNAG 120 (291)
T ss_dssp HHHTCCCCEEEECCC
T ss_pred HHHcCCCcEEEECCC
Confidence 001235898888663
No 443
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=56.12 E-value=31 Score=33.23 Aligned_cols=87 Identities=18% Similarity=0.128 Sum_probs=53.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcC-CHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDV-DNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Di-s~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
|.+|| +.-|.|+...+++..+... ...|++.+. +..+++.+.+.+...+. ++.++..|.+...........
T Consensus 4 ~k~vl-VTGas~giG~~ia~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~ 75 (246)
T 2uvd_A 4 GKVAL-VTGASRGIGRAIAIDLAKQ------GANVVVNYAGNEQKANEVVDEIKKLGS-DAIAVRADVANAEDVTNMVKQ 75 (246)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHT------TCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHC------CCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHH
Confidence 44555 5667788899998887632 347888888 88888777777666553 467777887754221100000
Q ss_pred CCCCCCCCCeeecCCC
Q psy17365 257 GNKVPMKFDRVLCDVP 272 (646)
Q Consensus 257 g~~~~~~FD~IL~D~P 272 (646)
-.......|.++..+-
T Consensus 76 ~~~~~g~id~lv~nAg 91 (246)
T 2uvd_A 76 TVDVFGQVDILVNNAG 91 (246)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 0000136898888664
No 444
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=55.87 E-value=29 Score=33.62 Aligned_cols=87 Identities=10% Similarity=-0.037 Sum_probs=53.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
|..||=.+ |.|+...+++..+... ...|++++.+..+++.+.+.+...+. ++.++..|.+...........-
T Consensus 7 ~k~~lVTG-as~gIG~aia~~l~~~------G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~~~~~~~~~ 78 (247)
T 2jah_A 7 GKVALITG-ASSGIGEATARALAAE------GAAVAIAARRVEKLRALGDELTAAGA-KVHVLELDVADRQGVDAAVAST 78 (247)
T ss_dssp TCEEEEES-CSSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHH
Confidence 45566444 5678888888877532 34799999999988887777765553 5677788877632211000000
Q ss_pred CCCCCCCCeeecCCC
Q psy17365 258 NKVPMKFDRVLCDVP 272 (646)
Q Consensus 258 ~~~~~~FD~IL~D~P 272 (646)
.......|.++..+-
T Consensus 79 ~~~~g~id~lv~nAg 93 (247)
T 2jah_A 79 VEALGGLDILVNNAG 93 (247)
T ss_dssp HHHHSCCSEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 001136898888653
No 445
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=55.77 E-value=34 Score=32.55 Aligned_cols=85 Identities=15% Similarity=0.014 Sum_probs=51.2
Q ss_pred eEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEE-EcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCCC
Q psy17365 180 KVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVA-NDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADGN 258 (646)
Q Consensus 180 ~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA-~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g~ 258 (646)
+|| +.-|.|+...+++..+... ...|++ .+.+..+++.+.+.++..+. ++.++..|.+...........-.
T Consensus 3 ~vl-VTGasggiG~~la~~l~~~------G~~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~ 74 (244)
T 1edo_A 3 VVV-VTGASRGIGKAIALSLGKA------GCKVLVNYARSAKAAEEVSKQIEAYGG-QAITFGGDVSKEADVEAMMKTAI 74 (244)
T ss_dssp EEE-ETTCSSHHHHHHHHHHHHT------TCEEEEEESSCHHHHHHHHHHHHHHTC-EEEEEECCTTSHHHHHHHHHHHH
T ss_pred EEE-EeCCCchHHHHHHHHHHHC------CCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEeCCCCCHHHHHHHHHHHH
Confidence 444 5667889999999887632 236777 58888888777776665553 56777888775422110000000
Q ss_pred CCCCCCCeeecCCC
Q psy17365 259 KVPMKFDRVLCDVP 272 (646)
Q Consensus 259 ~~~~~FD~IL~D~P 272 (646)
......|.|+..+-
T Consensus 75 ~~~g~id~li~~Ag 88 (244)
T 1edo_A 75 DAWGTIDVVVNNAG 88 (244)
T ss_dssp HHSSCCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 01236898888664
No 446
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=55.74 E-value=25 Score=34.90 Aligned_cols=87 Identities=10% Similarity=0.019 Sum_probs=52.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
.+..||=. -|.|+...+++..+... ...|+++|.+..+++.+...+...+ ++.++..|.+...........
T Consensus 28 ~~k~vlVT-Gas~gIG~aia~~L~~~------G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~Dv~d~~~v~~~~~~ 98 (276)
T 2b4q_A 28 AGRIALVT-GGSRGIGQMIAQGLLEA------GARVFICARDAEACADTATRLSAYG--DCQAIPADLSSEAGARRLAQA 98 (276)
T ss_dssp TTCEEEEE-TTTSHHHHHHHHHHHHT------TCEEEEECSCHHHHHHHHHHHTTSS--CEEECCCCTTSHHHHHHHHHH
T ss_pred CCCEEEEe-CCCChHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHhcC--ceEEEEeeCCCHHHHHHHHHH
Confidence 35566644 55688888888877532 3479999999988776666554434 577777887653221100000
Q ss_pred CCCCCCCCCeeecCCC
Q psy17365 257 GNKVPMKFDRVLCDVP 272 (646)
Q Consensus 257 g~~~~~~FD~IL~D~P 272 (646)
-.......|.|+..+-
T Consensus 99 ~~~~~g~iD~lvnnAg 114 (276)
T 2b4q_A 99 LGELSARLDILVNNAG 114 (276)
T ss_dssp HHHHCSCCSEEEECCC
T ss_pred HHHhcCCCCEEEECCC
Confidence 0001236898888664
No 447
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=55.72 E-value=57 Score=31.23 Aligned_cols=84 Identities=14% Similarity=0.162 Sum_probs=51.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
++.+|| +.-|.|+...+++..+... ...|++.+.+..+++.+...+. .++.+...|.+........ .
T Consensus 13 ~~k~vl-VTGas~gIG~~~a~~l~~~------G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~-~- 79 (249)
T 3f9i_A 13 TGKTSL-ITGASSGIGSAIARLLHKL------GSKVIISGSNEEKLKSLGNALK----DNYTIEVCNLANKEECSNL-I- 79 (249)
T ss_dssp TTCEEE-ETTTTSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHC----SSEEEEECCTTSHHHHHHH-H-
T ss_pred CCCEEE-EECCCChHHHHHHHHHHHC------CCEEEEEcCCHHHHHHHHHHhc----cCccEEEcCCCCHHHHHHH-H-
Confidence 466677 5566788888888887532 3479999999988777655432 3567777787653221100 0
Q ss_pred CCCCCCCCCeeecCCCCCC
Q psy17365 257 GNKVPMKFDRVLCDVPCTG 275 (646)
Q Consensus 257 g~~~~~~FD~IL~D~PCSG 275 (646)
......|.|+..+-...
T Consensus 80 --~~~~~id~li~~Ag~~~ 96 (249)
T 3f9i_A 80 --SKTSNLDILVCNAGITS 96 (249)
T ss_dssp --HTCSCCSEEEECCC---
T ss_pred --HhcCCCCEEEECCCCCC
Confidence 01136899988764433
No 448
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=55.10 E-value=26 Score=34.64 Aligned_cols=87 Identities=7% Similarity=-0.068 Sum_probs=54.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
|..|| +.-|.|+...+++..+... ...|++++.+..+++.+...++..+.. +.++..|.+...........-
T Consensus 28 ~k~~l-VTGas~GIG~aia~~la~~------G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~ 99 (270)
T 3ftp_A 28 KQVAI-VTGASRGIGRAIALELARR------GAMVIGTATTEAGAEGIGAAFKQAGLE-GRGAVLNVNDATAVDALVEST 99 (270)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHT------TCEEEEEESSHHHHHHHHHHHHHHTCC-CEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEEeCCCHHHHHHHHHHH
Confidence 44555 5667788888888877532 347999999999998888888776643 566677876532211000000
Q ss_pred CCCCCCCCeeecCCC
Q psy17365 258 NKVPMKFDRVLCDVP 272 (646)
Q Consensus 258 ~~~~~~FD~IL~D~P 272 (646)
.......|.++..+-
T Consensus 100 ~~~~g~iD~lvnnAg 114 (270)
T 3ftp_A 100 LKEFGALNVLVNNAG 114 (270)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 001236898888764
No 449
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=55.02 E-value=1.7e+02 Score=28.91 Aligned_cols=83 Identities=12% Similarity=-0.072 Sum_probs=52.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEE-ecCCCCCccccccCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIIT-NHDASVMPNVLYTDA 255 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~-~~Da~~~p~~~~~~~ 255 (646)
.+.+||= .-|.|....+++..+... ...|++.+.+..+...+...+....-.++.++ .+|.+....+.
T Consensus 10 ~~~~vlV-TGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~---- 78 (342)
T 1y1p_A 10 EGSLVLV-TGANGFVASHVVEQLLEH------GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYD---- 78 (342)
T ss_dssp TTCEEEE-ETTTSHHHHHHHHHHHHT------TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTT----
T ss_pred CCCEEEE-ECCccHHHHHHHHHHHHC------CCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHH----
Confidence 4667874 456799999999877532 24799999998877666554433222457776 78876543211
Q ss_pred CCCCCCCCCCeeecCCCC
Q psy17365 256 DGNKVPMKFDRVLCDVPC 273 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PC 273 (646)
.....+|.|+.-+..
T Consensus 79 ---~~~~~~d~vih~A~~ 93 (342)
T 1y1p_A 79 ---EVIKGAAGVAHIASV 93 (342)
T ss_dssp ---TTTTTCSEEEECCCC
T ss_pred ---HHHcCCCEEEEeCCC
Confidence 111358999886653
No 450
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=54.99 E-value=27 Score=34.63 Aligned_cols=88 Identities=9% Similarity=-0.060 Sum_probs=53.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
|.+||= .-|.|+...+++..+... ...|++.+.+..++..+...+....-.++.++..|.+...........-
T Consensus 26 ~k~vlI-TGasggiG~~la~~L~~~------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 98 (302)
T 1w6u_A 26 GKVAFI-TGGGTGLGKGMTTLLSSL------GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSEL 98 (302)
T ss_dssp TCEEEE-ETTTSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEE-ECCCchHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHH
Confidence 556664 455688888898887532 3479999999988877766665431235778888887532211000000
Q ss_pred CCCCCCCCeeecCCC
Q psy17365 258 NKVPMKFDRVLCDVP 272 (646)
Q Consensus 258 ~~~~~~FD~IL~D~P 272 (646)
......+|.|+..+-
T Consensus 99 ~~~~g~id~li~~Ag 113 (302)
T 1w6u_A 99 IKVAGHPNIVINNAA 113 (302)
T ss_dssp HHHTCSCSEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 001236799988664
No 451
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=54.87 E-value=30 Score=34.14 Aligned_cols=88 Identities=9% Similarity=-0.031 Sum_probs=55.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC--CeEEEecCCCCCccccccCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP--CAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~--ni~v~~~Da~~~p~~~~~~~ 255 (646)
|.+||=. -|.|+...+++..+... ...|+.+|.+..++..+.+.++..+.. .+.++..|.+..........
T Consensus 11 ~k~vlVT-Gas~gIG~aia~~l~~~------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 83 (281)
T 3svt_A 11 DRTYLVT-GGGSGIGKGVAAGLVAA------GASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVD 83 (281)
T ss_dssp TCEEEEE-TTTSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHH
T ss_pred CCEEEEe-CCCcHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHH
Confidence 5566644 45677888888877532 347999999999988888888776653 57778888876432110000
Q ss_pred CCCCCCCCCCeeecCCC
Q psy17365 256 DGNKVPMKFDRVLCDVP 272 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~P 272 (646)
.-.......|.++..+-
T Consensus 84 ~~~~~~g~id~lv~nAg 100 (281)
T 3svt_A 84 AVTAWHGRLHGVVHCAG 100 (281)
T ss_dssp HHHHHHSCCCEEEECCC
T ss_pred HHHHHcCCCCEEEECCC
Confidence 00001236898888663
No 452
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=54.48 E-value=11 Score=36.81 Aligned_cols=137 Identities=10% Similarity=-0.033 Sum_probs=71.8
Q ss_pred CCCCeEEEEcCC-CchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 176 QTHHKVLDMCAA-PGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 176 ~pg~~VLDmCAa-PGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
..+.+||=.+|+ +|+...+++..+... ...|++++.+....+.+.+..+..+ .+.++..|.+........-
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~ 83 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKRE------GAELAFTYVGDRFKDRITEFAAEFG--SELVFPCDVADDAQIDALF 83 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHT------TCEEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHc------CCCEEEEecchhhHHHHHHHHHHcC--CcEEEECCCCCHHHHHHHH
Confidence 356678866664 478888888887532 3478889888655555555445544 3677788887643211000
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhh----HHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNL----HGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l----~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
..-.......|.++..+--...+.+.. ..+...+.++.... ..-...+++.++..++.+|++|+.+
T Consensus 84 ~~~~~~~g~id~lv~nAg~~~~~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 84 ASLKTHWDSLDGLVHSIGFAPREAIAG--DFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp HHHHHHCSCEEEEEECCCCCCGGGGSS--CTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHcCCCCEEEECCccCccccccC--ccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 000001246798887663222110000 00000122222111 1223456677778888888888754
No 453
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=54.44 E-value=20 Score=37.77 Aligned_cols=102 Identities=15% Similarity=0.144 Sum_probs=58.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
+|.+|+=+++ |+....+++.+... + ..|++.|.++.+++.+.+ .+|.. +.+...+...+...
T Consensus 167 ~g~~V~ViG~--G~iG~~~a~~a~~~-----G-a~V~~~d~~~~~l~~~~~---~~g~~-~~~~~~~~~~l~~~------ 228 (377)
T 2vhw_A 167 EPADVVVIGA--GTAGYNAARIANGM-----G-ATVTVLDINIDKLRQLDA---EFCGR-IHTRYSSAYELEGA------ 228 (377)
T ss_dssp CCCEEEEECC--SHHHHHHHHHHHHT-----T-CEEEEEESCHHHHHHHHH---HTTTS-SEEEECCHHHHHHH------
T ss_pred CCCEEEEECC--CHHHHHHHHHHHhC-----C-CEEEEEeCCHHHHHHHHH---hcCCe-eEeccCCHHHHHHH------
Confidence 5789998887 66666666665421 2 379999999998876643 24543 11111111111111
Q ss_pred CCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 257 GNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 257 g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
...+|.|+.-+++.+. ..|.+ +...+++.+|+||+||-..
T Consensus 229 ----l~~aDvVi~~~~~p~~----~t~~l------------------i~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 229 ----VKRADLVIGAVLVPGA----KAPKL------------------VSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp ----HHHCSEEEECCCCTTS----CCCCC------------------BCHHHHTTSCTTCEEEEGG
T ss_pred ----HcCCCEEEECCCcCCC----CCcce------------------ecHHHHhcCCCCcEEEEEe
Confidence 1258988875544332 12222 2345677899999988544
No 454
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=54.40 E-value=28 Score=34.48 Aligned_cols=87 Identities=11% Similarity=0.094 Sum_probs=53.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
+.+|| +.-|.||...+++..+... ...|+..+.+..+++.+...++..+. .+.++..|.+...........-
T Consensus 4 ~k~~l-VTGas~GIG~aia~~la~~------G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~ 75 (264)
T 3tfo_A 4 DKVIL-ITGASGGIGEGIARELGVA------GAKILLGARRQARIEAIATEIRDAGG-TALAQVLDVTDRHSVAAFAQAA 75 (264)
T ss_dssp TCEEE-ESSTTSHHHHHHHHHHHHT------TCEEEEEESSHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEE-EeCCccHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHH
Confidence 34455 4556678888888887532 34799999999999888888777653 4667778877532211000000
Q ss_pred CCCCCCCCeeecCCC
Q psy17365 258 NKVPMKFDRVLCDVP 272 (646)
Q Consensus 258 ~~~~~~FD~IL~D~P 272 (646)
.......|.++..+-
T Consensus 76 ~~~~g~iD~lVnnAG 90 (264)
T 3tfo_A 76 VDTWGRIDVLVNNAG 90 (264)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 001236898888663
No 455
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=54.18 E-value=34 Score=34.13 Aligned_cols=87 Identities=13% Similarity=0.011 Sum_probs=55.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
|..+| +.-|.+|....+|..+.. ....|+.+|.+.++++.+.+.+...|. ++..+..|.+........-..-
T Consensus 9 gKval-VTGas~GIG~aia~~la~------~Ga~Vvi~~~~~~~~~~~~~~l~~~g~-~~~~~~~Dv~~~~~v~~~~~~~ 80 (255)
T 4g81_D 9 GKTAL-VTGSARGLGFAYAEGLAA------AGARVILNDIRATLLAESVDTLTRKGY-DAHGVAFDVTDELAIEAAFSKL 80 (255)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHH------TTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHH------CCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHH
Confidence 55555 455566778888887753 245899999999999988888887764 4677788877632211000000
Q ss_pred CCCCCCCCeeecCCC
Q psy17365 258 NKVPMKFDRVLCDVP 272 (646)
Q Consensus 258 ~~~~~~FD~IL~D~P 272 (646)
.....+.|.++.++-
T Consensus 81 ~~~~G~iDiLVNNAG 95 (255)
T 4g81_D 81 DAEGIHVDILINNAG 95 (255)
T ss_dssp HHTTCCCCEEEECCC
T ss_pred HHHCCCCcEEEECCC
Confidence 012356898887763
No 456
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=54.03 E-value=18 Score=35.72 Aligned_cols=135 Identities=14% Similarity=0.046 Sum_probs=71.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEE-cCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVAN-DVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~-Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
|..||= .-|.||...++|..+... ...|+.+ ..+..+++.+...+...+. .+.++..|.+...........
T Consensus 27 ~k~~lV-TGas~GIG~aia~~la~~------G~~Vv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~ 98 (267)
T 3u5t_A 27 NKVAIV-TGASRGIGAAIAARLASD------GFTVVINYAGKAAAAEEVAGKIEAAGG-KALTAQADVSDPAAVRRLFAT 98 (267)
T ss_dssp CCEEEE-ESCSSHHHHHHHHHHHHH------TCEEEEEESSCSHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEE-eCCCCHHHHHHHHHHHHC------CCEEEEEcCCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHH
Confidence 555664 455677788888777532 2355555 5667777777777776654 467778888764321100000
Q ss_pred CCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcC
Q psy17365 257 GNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTC 323 (646)
Q Consensus 257 g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTC 323 (646)
-.......|.++..+--...+.+...+.- .|.. .......-...+++.++..++.+|++|+.+.
T Consensus 99 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~--~~~~-~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS 162 (267)
T 3u5t_A 99 AEEAFGGVDVLVNNAGIMPLTTIAETGDA--VFDR-VIAVNLKGTFNTLREAAQRLRVGGRIINMST 162 (267)
T ss_dssp HHHHHSCEEEEEECCCCCCCCCGGGCCHH--HHHH-HHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHH--HHHH-HHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence 00012368888876643222222111110 1110 0111122234567788888888999997653
No 457
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=53.42 E-value=31 Score=34.10 Aligned_cols=88 Identities=8% Similarity=-0.059 Sum_probs=54.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC--CeEEEecCCCCCccccccCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP--CAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~--ni~v~~~Da~~~p~~~~~~~ 255 (646)
|.+|| +.-|.|+...+++..+... ...|++++.+..++..+.+.+...+.. ++.++..|.+..........
T Consensus 6 ~k~vl-VTGas~gIG~~ia~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 78 (280)
T 1xkq_A 6 NKTVI-ITGSSNGIGRTTAILFAQE------GANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIIN 78 (280)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred CCEEE-EECCCChHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHH
Confidence 44555 5556788888888887532 347999999999888777766655432 57778888876422110000
Q ss_pred CCCCCCCCCCeeecCCC
Q psy17365 256 DGNKVPMKFDRVLCDVP 272 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~P 272 (646)
.-.......|.++..+-
T Consensus 79 ~~~~~~g~iD~lv~nAg 95 (280)
T 1xkq_A 79 STLKQFGKIDVLVNNAG 95 (280)
T ss_dssp HHHHHHSCCCEEEECCC
T ss_pred HHHHhcCCCCEEEECCC
Confidence 00001136898888764
No 458
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=53.27 E-value=33 Score=33.55 Aligned_cols=87 Identities=13% Similarity=-0.005 Sum_probs=55.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
.|..||=.+ |.|+...+++..+... ...|+..|.+..+++.+.+.+...+. ++.++..|.+...........
T Consensus 10 ~~k~vlVTG-as~gIG~aia~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~ 81 (264)
T 3ucx_A 10 TDKVVVISG-VGPALGTTLARRCAEQ------GADLVLAARTVERLEDVAKQVTDTGR-RALSVGTDITDDAQVAHLVDE 81 (264)
T ss_dssp TTCEEEEES-CCTTHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHH
T ss_pred CCcEEEEEC-CCcHHHHHHHHHHHHC------cCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHH
Confidence 456677555 5567788888777532 34799999999999888888877653 577788888764321100000
Q ss_pred CCCCCCCCCeeecCC
Q psy17365 257 GNKVPMKFDRVLCDV 271 (646)
Q Consensus 257 g~~~~~~FD~IL~D~ 271 (646)
-.......|.++..+
T Consensus 82 ~~~~~g~id~lv~nA 96 (264)
T 3ucx_A 82 TMKAYGRVDVVINNA 96 (264)
T ss_dssp HHHHTSCCSEEEECC
T ss_pred HHHHcCCCcEEEECC
Confidence 001124689888876
No 459
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=52.84 E-value=29 Score=34.30 Aligned_cols=87 Identities=13% Similarity=0.132 Sum_probs=55.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
|.+|| +.-|.|+...+++..+... ...|+.+|.+..++..+.+.++..+. ++.++..|.+...........-
T Consensus 26 gk~~l-VTGas~gIG~aia~~la~~------G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~ 97 (271)
T 4ibo_A 26 GRTAL-VTGSSRGLGRAMAEGLAVA------GARILINGTDPSRVAQTVQEFRNVGH-DAEAVAFDVTSESEIIEAFARL 97 (271)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHT------TCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHH
Confidence 55565 5556788888888887532 34799999999998888888776653 5777888887643211000000
Q ss_pred CCCCCCCCeeecCCC
Q psy17365 258 NKVPMKFDRVLCDVP 272 (646)
Q Consensus 258 ~~~~~~FD~IL~D~P 272 (646)
.......|.++..+-
T Consensus 98 ~~~~g~iD~lv~nAg 112 (271)
T 4ibo_A 98 DEQGIDVDILVNNAG 112 (271)
T ss_dssp HHHTCCCCEEEECCC
T ss_pred HHHCCCCCEEEECCC
Confidence 001236898888764
No 460
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=52.77 E-value=91 Score=33.60 Aligned_cols=117 Identities=9% Similarity=-0.034 Sum_probs=63.0
Q ss_pred CCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHc-------------CCCCeEEEecCCCCCcccccc
Q psy17365 187 APGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRL-------------NSPCAIITNHDASVMPNVLYT 253 (646)
Q Consensus 187 aPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rl-------------g~~ni~v~~~Da~~~p~~~~~ 253 (646)
|.|.....+|..+... .-.|+++|+++.+++.+.+..... ...++.++ .|...
T Consensus 9 G~G~vG~~lA~~La~~------G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t-~d~~e------- 74 (450)
T 3gg2_A 9 GIGYVGLVSATCFAEL------GANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFG-TEIEQ------- 74 (450)
T ss_dssp CCSHHHHHHHHHHHHT------TCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEE-SCHHH-------
T ss_pred CcCHHHHHHHHHHHhc------CCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEE-CCHHH-------
Confidence 5677777777776521 237999999999988876521000 01122222 11110
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHH
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAV 333 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~V 333 (646)
.....|.|++=+|-.-+. ...||+ . .-..++....+.|++|-.+| ..+|+.|...+.+
T Consensus 75 ------a~~~aDvViiaVptp~~~--~~~~dl------------~-~v~~v~~~i~~~l~~g~iVV-~~STv~pgt~~~l 132 (450)
T 3gg2_A 75 ------AVPEADIIFIAVGTPAGE--DGSADM------------S-YVLDAARSIGRAMSRYILIV-TKSTVPVGSYRLI 132 (450)
T ss_dssp ------HGGGCSEEEECCCCCBCT--TSSBCC------------H-HHHHHHHHHHHHCCSCEEEE-ECSCCCTTHHHHH
T ss_pred ------HHhcCCEEEEEcCCCccc--CCCcCh------------H-HHHHHHHHHHhhCCCCCEEE-EeeeCCCcchHHH
Confidence 013478999877633211 112332 1 11244556667788755555 4457888777766
Q ss_pred HHHHHH
Q psy17365 334 IQRLIV 339 (646)
Q Consensus 334 V~~~L~ 339 (646)
...+.+
T Consensus 133 ~~~l~~ 138 (450)
T 3gg2_A 133 RKAIQE 138 (450)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 544333
No 461
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=52.60 E-value=33 Score=33.45 Aligned_cols=87 Identities=13% Similarity=0.059 Sum_probs=51.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
.|.+||= .-|.|+...+++..+... ...|+..|.+..++..+...+ + ..+.++..|.+...........
T Consensus 7 ~~k~vlV-TGas~gIG~~ia~~l~~~------G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~v~~~~~~ 75 (259)
T 4e6p_A 7 EGKSALI-TGSARGIGRAFAEAYVRE------GATVAIADIDIERARQAAAEI---G-PAAYAVQMDVTRQDSIDAAIAA 75 (259)
T ss_dssp TTCEEEE-ETCSSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHH---C-TTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEE-ECCCcHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHh---C-CCceEEEeeCCCHHHHHHHHHH
Confidence 3556664 456688888888887532 347999999998877665443 3 3467778888764221100000
Q ss_pred CCCCCCCCCeeecCCCCC
Q psy17365 257 GNKVPMKFDRVLCDVPCT 274 (646)
Q Consensus 257 g~~~~~~FD~IL~D~PCS 274 (646)
-.......|.++..+--+
T Consensus 76 ~~~~~g~id~lv~~Ag~~ 93 (259)
T 4e6p_A 76 TVEHAGGLDILVNNAALF 93 (259)
T ss_dssp HHHHSSSCCEEEECCCCC
T ss_pred HHHHcCCCCEEEECCCcC
Confidence 001124689999876433
No 462
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=52.44 E-value=26 Score=34.79 Aligned_cols=89 Identities=10% Similarity=-0.004 Sum_probs=54.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcC-CHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDV-DNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Di-s~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
+.+||=.+ |.|+...+++..+... ...|+.+|. +..+++.+...+.......+.++..|.+...........
T Consensus 25 ~k~~lVTG-as~GIG~~ia~~la~~------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 97 (281)
T 3v2h_A 25 TKTAVITG-STSGIGLAIARTLAKA------GANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAM 97 (281)
T ss_dssp TCEEEEET-CSSHHHHHHHHHHHHT------TCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHH
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHC------CCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHH
Confidence 44566444 5677888888877532 347888998 677777777777665445678888888764221100000
Q ss_pred CCCCCCCCCeeecCCCC
Q psy17365 257 GNKVPMKFDRVLCDVPC 273 (646)
Q Consensus 257 g~~~~~~FD~IL~D~PC 273 (646)
-.......|.++..+--
T Consensus 98 ~~~~~g~iD~lv~nAg~ 114 (281)
T 3v2h_A 98 VADRFGGADILVNNAGV 114 (281)
T ss_dssp HHHHTSSCSEEEECCCC
T ss_pred HHHHCCCCCEEEECCCC
Confidence 00112468998887643
No 463
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=52.34 E-value=32 Score=33.19 Aligned_cols=87 Identities=15% Similarity=0.134 Sum_probs=52.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcC-CHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDV-DNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Di-s~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
+.+|| +.-|.|+...+++..+... ...|++++. +..++..+.+.+...+ .++.++..|.+...........
T Consensus 7 ~k~vl-ITGasggiG~~~a~~l~~~------G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~ 78 (261)
T 1gee_A 7 GKVVV-ITGSSTGLGKSMAIRFATE------KAKVVVNYRSKEDEANSVLEEIKKVG-GEAIAVKGDVTVESDVINLVQS 78 (261)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHT------TCEEEEEESSCHHHHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEE-EeCCCChHHHHHHHHHHHC------CCEEEEEcCCChHHHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHH
Confidence 45566 5556788889998877532 347889998 8888777777666554 3467778887753221100000
Q ss_pred CCCCCCCCCeeecCCC
Q psy17365 257 GNKVPMKFDRVLCDVP 272 (646)
Q Consensus 257 g~~~~~~FD~IL~D~P 272 (646)
-......+|.|+..+-
T Consensus 79 ~~~~~g~id~li~~Ag 94 (261)
T 1gee_A 79 AIKEFGKLDVMINNAG 94 (261)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 0000136899888664
No 464
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=51.85 E-value=46 Score=33.90 Aligned_cols=109 Identities=15% Similarity=0.011 Sum_probs=60.4
Q ss_pred eEEEEcCCCchHHHHHHHHhhhcCCCCCCCc--EEEEEcCCH---HHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 180 KVLDMCAAPGSKTAQIIEMIHAADSNPVPSG--LVVANDVDN---NRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 180 ~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G--~VvA~Dis~---~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
+|-=+ |.|.....+|..+. ..| .|++.|.++ .+.....+.+...|. . ..+....
T Consensus 26 ~IgvI--G~G~mG~~lA~~L~-------~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~----~-~~s~~e~------- 84 (317)
T 4ezb_A 26 TIAFI--GFGEAAQSIAGGLG-------GRNAARLAAYDLRFNDPAASGALRARAAELGV----E-PLDDVAG------- 84 (317)
T ss_dssp EEEEE--CCSHHHHHHHHHHH-------TTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC----E-EESSGGG-------
T ss_pred eEEEE--CccHHHHHHHHHHH-------HcCCCeEEEEeCCCccccchHHHHHHHHHCCC----C-CCCHHHH-------
Confidence 45444 46788888887775 244 799999997 233333334444454 1 1021111
Q ss_pred CCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCccccHHHH
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAVI 334 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~VV 334 (646)
....|.|++=+|- +.. .+.+......+++|.. |.+++|..|...+.+.
T Consensus 85 ------~~~aDvVi~avp~---------~~~----------------~~~~~~i~~~l~~~~i-vv~~st~~p~~~~~~~ 132 (317)
T 4ezb_A 85 ------IACADVVLSLVVG---------AAT----------------KAVAASAAPHLSDEAV-FIDLNSVGPDTKALAA 132 (317)
T ss_dssp ------GGGCSEEEECCCG---------GGH----------------HHHHHHHGGGCCTTCE-EEECCSCCHHHHHHHH
T ss_pred ------HhcCCEEEEecCC---------HHH----------------HHHHHHHHhhcCCCCE-EEECCCCCHHHHHHHH
Confidence 1247889987761 110 1234555667888554 4466678777666554
Q ss_pred HHHHHHcc
Q psy17365 335 QRLIVETQ 342 (646)
Q Consensus 335 ~~~L~~~~ 342 (646)
+.+.+.+
T Consensus 133 -~~l~~~g 139 (317)
T 4ezb_A 133 -GAIATGK 139 (317)
T ss_dssp -HHHHTSS
T ss_pred -HHHHHcC
Confidence 4455544
No 465
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=51.63 E-value=28 Score=34.34 Aligned_cols=131 Identities=14% Similarity=0.064 Sum_probs=70.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcC-------------CHHHHHHHHHHHHHcCCCCeEEEecC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDV-------------DNNRCYMLVHQAKRLNSPCAIITNHD 243 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Di-------------s~~Rl~~L~~n~~rlg~~ni~v~~~D 243 (646)
.|..||=.+ |.|+...+++..+... ...|+++|. +..+++.+.+.+...+. .+.++..|
T Consensus 14 ~gk~~lVTG-as~gIG~a~a~~la~~------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D 85 (280)
T 3pgx_A 14 QGRVAFITG-AARGQGRSHAVRLAAE------GADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGR-KALTRVLD 85 (280)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHT------TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTC-CEEEEECC
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHC------CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEEcC
Confidence 355666544 5577888888877532 347888887 67888887777776653 46777788
Q ss_pred CCCCccccccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhh----hHHHHHHHHHHHHHhhcc---CC
Q psy17365 244 ASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNN----LHGIQYRIVKRGVEMLAV---GG 316 (646)
Q Consensus 244 a~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~----l~~lQ~~IL~~A~~lLKp---GG 316 (646)
.+...........-.......|.++..+--...+.+. ..+.++... ...-...+++.++..++. +|
T Consensus 86 v~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~-------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g 158 (280)
T 3pgx_A 86 VRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVW-------ELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGG 158 (280)
T ss_dssp TTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGG-------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCE
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc-------cCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCC
Confidence 8764221100000000123689888866433222111 112222111 112223456666666542 68
Q ss_pred eEEEEc
Q psy17365 317 KIAYST 322 (646)
Q Consensus 317 ~LVYST 322 (646)
++|+.+
T Consensus 159 ~iv~is 164 (280)
T 3pgx_A 159 SIVVVS 164 (280)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 888754
No 466
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=51.36 E-value=33 Score=33.77 Aligned_cols=87 Identities=13% Similarity=0.005 Sum_probs=51.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHH-HHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQA-KRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~-~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
|..|| +.-|.|+...+++..+... ...|++++.+..++..+...+ +..+. .+.++..|.+...........
T Consensus 21 ~k~~l-VTGas~gIG~~ia~~l~~~------G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~v~~~~~~ 92 (267)
T 1vl8_A 21 GRVAL-VTGGSRGLGFGIAQGLAEA------GCSVVVASRNLEEASEAAQKLTEKYGV-ETMAFRCDVSNYEEVKKLLEA 92 (267)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHH
Confidence 44566 4455688888888887532 347999999998887776665 34443 466777887653221100000
Q ss_pred CCCCCCCCCeeecCCC
Q psy17365 257 GNKVPMKFDRVLCDVP 272 (646)
Q Consensus 257 g~~~~~~FD~IL~D~P 272 (646)
-.......|.++..+-
T Consensus 93 ~~~~~g~iD~lvnnAg 108 (267)
T 1vl8_A 93 VKEKFGKLDTVVNAAG 108 (267)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 0001136898888664
No 467
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=51.21 E-value=33 Score=33.71 Aligned_cols=87 Identities=16% Similarity=0.048 Sum_probs=54.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEecCCCCCccccccCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSP-CAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~-ni~v~~~Da~~~p~~~~~~~~ 256 (646)
+..||= .-|.|+...++++.+... ...|++++.+..++..+...+...+.. .+.++..|.+....+......
T Consensus 32 ~k~vlV-TGasggIG~~la~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 104 (279)
T 1xg5_A 32 DRLALV-TGASGGIGAAVARALVQQ------GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSA 104 (279)
T ss_dssp TCEEEE-ESTTSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEE-ECCCchHHHHHHHHHHHC------CCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHH
Confidence 556664 456788888888877532 347999999999988887777776643 467778888754221100000
Q ss_pred CCCCCCCCCeeecCC
Q psy17365 257 GNKVPMKFDRVLCDV 271 (646)
Q Consensus 257 g~~~~~~FD~IL~D~ 271 (646)
-......+|.|+..+
T Consensus 105 ~~~~~g~iD~vi~~A 119 (279)
T 1xg5_A 105 IRSQHSGVDICINNA 119 (279)
T ss_dssp HHHHHCCCSEEEECC
T ss_pred HHHhCCCCCEEEECC
Confidence 000013589888755
No 468
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=51.11 E-value=28 Score=34.54 Aligned_cols=90 Identities=9% Similarity=-0.053 Sum_probs=55.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
+..||=.+ |.|+...+++..+... ...|++++.+..++..+...+...+. .+.++..|.+...........-
T Consensus 24 ~k~~lVTG-as~GIG~aia~~la~~------G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~ 95 (279)
T 3sju_A 24 PQTAFVTG-VSSGIGLAVARTLAAR------GIAVYGCARDAKNVSAAVDGLRAAGH-DVDGSSCDVTSTDEVHAAVAAA 95 (279)
T ss_dssp -CEEEEES-TTSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeC-CCCHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHH
Confidence 45666444 5677888888877532 34799999999998888877776553 4777888887643211000000
Q ss_pred CCCCCCCCeeecCCCCCC
Q psy17365 258 NKVPMKFDRVLCDVPCTG 275 (646)
Q Consensus 258 ~~~~~~FD~IL~D~PCSG 275 (646)
.......|.++..+--..
T Consensus 96 ~~~~g~id~lv~nAg~~~ 113 (279)
T 3sju_A 96 VERFGPIGILVNSAGRNG 113 (279)
T ss_dssp HHHHCSCCEEEECCCCCC
T ss_pred HHHcCCCcEEEECCCCCC
Confidence 001236898888764433
No 469
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=50.91 E-value=37 Score=35.70 Aligned_cols=94 Identities=16% Similarity=0.059 Sum_probs=61.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEE-EcCCHHHHHHHHHHHHHcCCCC--eEEEecCCCCCcccccc
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVA-NDVDNNRCYMLVHQAKRLNSPC--AIITNHDASVMPNVLYT 253 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA-~Dis~~Rl~~L~~n~~rlg~~n--i~v~~~Da~~~p~~~~~ 253 (646)
++.+||.+..+-|..|+.++.. .++. .| |.-....+.+|+.++|+.. +.+...-. .
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~------------~~~~~~d-s~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~------- 96 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH------------KPYSIGD-SYISELATRENLRLNGIDESSVKFLDSTA-D------- 96 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG------------CCEEEES-CHHHHHHHHHHHHHTTCCGGGSEEEETTS-C-------
T ss_pred CCCCEEEECCCCCHHHHhhccC------------CceEEEh-HHHHHHHHHHHHHHcCCCccceEeccccc-c-------
Confidence 3457999999999998877532 1233 35 5555578899999999864 33332111 1
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEE
Q psy17365 254 DADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAY 320 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVY 320 (646)
....||.|++-.|-+ +..+ ...|..+...|++|+.|+-
T Consensus 97 ------~~~~~~~v~~~lpk~----------------------~~~l-~~~L~~l~~~l~~~~~i~~ 134 (375)
T 4dcm_A 97 ------YPQQPGVVLIKVPKT----------------------LALL-EQQLRALRKVVTSDTRIIA 134 (375)
T ss_dssp ------CCSSCSEEEEECCSC----------------------HHHH-HHHHHHHHTTCCTTSEEEE
T ss_pred ------cccCCCEEEEEcCCC----------------------HHHH-HHHHHHHHhhCCCCCEEEE
Confidence 125799999877611 1111 3567788889999998863
No 470
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=50.70 E-value=36 Score=33.26 Aligned_cols=87 Identities=6% Similarity=0.020 Sum_probs=52.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEE-cCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVAN-DVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~-Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
|.+|| +.-|.|+...+++..+... ...|+.. +.+..++..+.+.++..+. .+.++..|.+...........
T Consensus 4 ~k~vl-VTGas~gIG~aia~~l~~~------G~~vv~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~ 75 (258)
T 3oid_A 4 NKCAL-VTGSSRGVGKAAAIRLAEN------GYNIVINYARSKKAALETAEEIEKLGV-KVLVVKANVGQPAKIKEMFQQ 75 (258)
T ss_dssp CCEEE-ESSCSSHHHHHHHHHHHHT------TCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEE-EecCCchHHHHHHHHHHHC------CCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHH
Confidence 44555 5556788888888887632 2356665 8899888888877776653 577788888764321100000
Q ss_pred CCCCCCCCCeeecCCC
Q psy17365 257 GNKVPMKFDRVLCDVP 272 (646)
Q Consensus 257 g~~~~~~FD~IL~D~P 272 (646)
-.......|.++..+-
T Consensus 76 ~~~~~g~id~lv~nAg 91 (258)
T 3oid_A 76 IDETFGRLDVFVNNAA 91 (258)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 0001246898888663
No 471
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=50.70 E-value=1e+02 Score=30.04 Aligned_cols=81 Identities=12% Similarity=0.109 Sum_probs=49.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
|.+|| +.-|.|+...+++..+... ...|+..|.+..+++.+...+ + .++.++..|.+...........-
T Consensus 30 ~k~vl-VTGas~GIG~aia~~l~~~------G~~Vi~~~r~~~~~~~~~~~~---~-~~~~~~~~Dl~~~~~v~~~~~~~ 98 (281)
T 3ppi_A 30 GASAI-VSGGAGGLGEATVRRLHAD------GLGVVIADLAAEKGKALADEL---G-NRAEFVSTNVTSEDSVLAAIEAA 98 (281)
T ss_dssp TEEEE-EETTTSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHH---C-TTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEE-EECCCChHHHHHHHHHHHC------CCEEEEEeCChHHHHHHHHHh---C-CceEEEEcCCCCHHHHHHHHHHH
Confidence 55666 4455677888888877532 347999999998887766554 3 35778888887643211000000
Q ss_pred CCCCCCCCeeecC
Q psy17365 258 NKVPMKFDRVLCD 270 (646)
Q Consensus 258 ~~~~~~FD~IL~D 270 (646)
......|.++..
T Consensus 99 -~~~~~id~lv~~ 110 (281)
T 3ppi_A 99 -NQLGRLRYAVVA 110 (281)
T ss_dssp -TTSSEEEEEEEC
T ss_pred -HHhCCCCeEEEc
Confidence 112357888876
No 472
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=49.99 E-value=35 Score=33.51 Aligned_cols=88 Identities=13% Similarity=0.041 Sum_probs=53.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCC------------HHHHHHHHHHHHHcCCCCeEEEecCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVD------------NNRCYMLVHQAKRLNSPCAIITNHDA 244 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis------------~~Rl~~L~~n~~rlg~~ni~v~~~Da 244 (646)
.|.+||=. -|.|+...+++..+... ...|+++|.+ ..++..+.+.+...+. .+.++..|.
T Consensus 12 ~gk~vlVT-Gas~gIG~~ia~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~ 83 (278)
T 3sx2_A 12 TGKVAFIT-GAARGQGRAHAVRLAAD------GADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS-RIVARQADV 83 (278)
T ss_dssp TTCEEEEE-STTSHHHHHHHHHHHHT------TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC-CEEEEECCT
T ss_pred CCCEEEEE-CCCChHHHHHHHHHHHC------CCeEEEEecccccccccccccchHHHHHHHHHHHhcCC-eEEEEeCCC
Confidence 35566644 45677888888877532 3478888887 7777777777766663 577888888
Q ss_pred CCCccccccCCCCCCCCCCCCeeecCCC
Q psy17365 245 SVMPNVLYTDADGNKVPMKFDRVLCDVP 272 (646)
Q Consensus 245 ~~~p~~~~~~~~g~~~~~~FD~IL~D~P 272 (646)
+...........-.......|.++..+-
T Consensus 84 ~~~~~v~~~~~~~~~~~g~id~lv~nAg 111 (278)
T 3sx2_A 84 RDRESLSAALQAGLDELGRLDIVVANAG 111 (278)
T ss_dssp TCHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 7643211000000001136898888663
No 473
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=49.34 E-value=33 Score=33.42 Aligned_cols=87 Identities=6% Similarity=0.019 Sum_probs=53.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
|.+|| +.-|.|+...+++..+... ...|++.|.+..++..+...++..+ ..+.++..|.+...........-
T Consensus 6 ~k~vl-VTGas~gIG~aia~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~ 77 (257)
T 3imf_A 6 EKVVI-ITGGSSGMGKGMATRFAKE------GARVVITGRTKEKLEEAKLEIEQFP-GQILTVQMDVRNTDDIQKMIEQI 77 (257)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHCCST-TCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHH
Confidence 44555 5556788888888887532 3479999999999888777665544 35777888887642211000000
Q ss_pred CCCCCCCCeeecCCC
Q psy17365 258 NKVPMKFDRVLCDVP 272 (646)
Q Consensus 258 ~~~~~~FD~IL~D~P 272 (646)
.......|.++..+-
T Consensus 78 ~~~~g~id~lv~nAg 92 (257)
T 3imf_A 78 DEKFGRIDILINNAA 92 (257)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 001236898888663
No 474
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=49.00 E-value=43 Score=33.91 Aligned_cols=91 Identities=10% Similarity=0.020 Sum_probs=54.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCC------------HHHHHHHHHHHHHcCCCCeEEEecCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVD------------NNRCYMLVHQAKRLNSPCAIITNHDA 244 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis------------~~Rl~~L~~n~~rlg~~ni~v~~~Da 244 (646)
.|..|| +.-|.|+...+++..+... ...|+++|.+ ..++..+...+...+. .+.++..|.
T Consensus 45 ~gk~~l-VTGas~GIG~aia~~la~~------G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv 116 (317)
T 3oec_A 45 QGKVAF-ITGAARGQGRTHAVRLAQD------GADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGR-RIIARQADV 116 (317)
T ss_dssp TTCEEE-ESSCSSHHHHHHHHHHHHT------TCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCT
T ss_pred CCCEEE-EeCCCcHHHHHHHHHHHHC------CCeEEEEecccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCC
Confidence 355565 5556678888888877532 3478888876 6777777666666653 577788888
Q ss_pred CCCccccccCCCCCCCCCCCCeeecCCCCCC
Q psy17365 245 SVMPNVLYTDADGNKVPMKFDRVLCDVPCTG 275 (646)
Q Consensus 245 ~~~p~~~~~~~~g~~~~~~FD~IL~D~PCSG 275 (646)
+...........-.......|.++..+--+.
T Consensus 117 ~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~ 147 (317)
T 3oec_A 117 RDLASLQAVVDEALAEFGHIDILVSNVGISN 147 (317)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 7643211000000001246899888764333
No 475
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=48.82 E-value=31 Score=34.49 Aligned_cols=134 Identities=9% Similarity=-0.022 Sum_probs=71.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCC--HHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVD--NNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTD 254 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis--~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~ 254 (646)
.|.+||=.+ |.|+...+++..+... ...|+.++.+ ...++.+...++..+ .++.++..|.+.........
T Consensus 48 ~~k~vlVTG-as~GIG~aia~~la~~------G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~ 119 (294)
T 3r3s_A 48 KDRKALVTG-GDSGIGRAAAIAYARE------GADVAINYLPAEEEDAQQVKALIEECG-RKAVLLPGDLSDESFARSLV 119 (294)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHT------TCEEEEECCGGGHHHHHHHHHHHHHTT-CCEEECCCCTTSHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHC------CCEEEEEeCCcchhHHHHHHHHHHHcC-CcEEEEEecCCCHHHHHHHH
Confidence 355666555 5678888888877532 3468888876 345666666666665 35777788877632211000
Q ss_pred CCCCCCCCCCCeeecCCCCCC-Cccccc-CccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 255 ADGNKVPMKFDRVLCDVPCTG-DGTMRK-NPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 255 ~~g~~~~~~FD~IL~D~PCSG-~G~lrk-~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
..-.......|.++..+--.. .+.+.. .++ .|.. .......-...+++.++..++.+|++|+.+
T Consensus 120 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~---~~~~-~~~vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 120 HKAREALGGLDILALVAGKQTAIPEIKDLTSE---QFQQ-TFAVNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp HHHHHHHTCCCEEEECCCCCCCCSSGGGCCHH---HHHH-HHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHcCCCCEEEECCCCcCCCCCcccCCHH---HHHH-HHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 000001246898887653211 111111 111 1110 111111223467778888888899999764
No 476
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=48.65 E-value=55 Score=33.45 Aligned_cols=81 Identities=11% Similarity=0.126 Sum_probs=52.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
.+.+|| +.-|+|+...+++..+.... +...|++.+.++.+...+...+ ...++.++.+|.+....+..
T Consensus 20 ~~k~vl-VTGatG~iG~~l~~~L~~~~----g~~~V~~~~r~~~~~~~~~~~~---~~~~v~~~~~Dl~d~~~l~~---- 87 (344)
T 2gn4_A 20 DNQTIL-ITGGTGSFGKCFVRKVLDTT----NAKKIIVYSRDELKQSEMAMEF---NDPRMRFFIGDVRDLERLNY---- 87 (344)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHHC----CCSEEEEEESCHHHHHHHHHHH---CCTTEEEEECCTTCHHHHHH----
T ss_pred CCCEEE-EECCCcHHHHHHHHHHHhhC----CCCEEEEEECChhhHHHHHHHh---cCCCEEEEECCCCCHHHHHH----
Confidence 466777 55667999999998875210 1127999999988876665443 33568888889876432211
Q ss_pred CCCCCCCCCeeecCCC
Q psy17365 257 GNKVPMKFDRVLCDVP 272 (646)
Q Consensus 257 g~~~~~~FD~IL~D~P 272 (646)
....+|.|+.-+.
T Consensus 88 ---~~~~~D~Vih~Aa 100 (344)
T 2gn4_A 88 ---ALEGVDICIHAAA 100 (344)
T ss_dssp ---HTTTCSEEEECCC
T ss_pred ---HHhcCCEEEECCC
Confidence 0135899988654
No 477
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=48.23 E-value=12 Score=38.34 Aligned_cols=37 Identities=30% Similarity=0.614 Sum_probs=30.3
Q ss_pred HHHHHHHHHhhccCCeEEEEcCCCCccccHHHHHHHHHHc
Q psy17365 302 YRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAVIQRLIVET 341 (646)
Q Consensus 302 ~~IL~~A~~lLKpGG~LVYSTCSl~p~ENE~VV~~~L~~~ 341 (646)
...|..|..+|+|||+|+.- |++..|+- +|..+++++
T Consensus 213 ~~~L~~a~~~L~~gGrl~vi--sfHSLEDR-iVK~~~~~~ 249 (285)
T 1wg8_A 213 KEFLEQAAEVLAPGGRLVVI--AFHSLEDR-VVKRFLRES 249 (285)
T ss_dssp HHHHHHHHHHEEEEEEEEEE--ECSHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEE--ecCcHHHH-HHHHHHHhC
Confidence 36788999999999999864 78888885 778888763
No 478
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=48.22 E-value=2.1e+02 Score=28.14 Aligned_cols=63 Identities=21% Similarity=0.105 Sum_probs=44.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEc-CCHHHHHHHHHHHH-HcCCCCeEEEecCCCCCc
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVAND-VDNNRCYMLVHQAK-RLNSPCAIITNHDASVMP 248 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~D-is~~Rl~~L~~n~~-rlg~~ni~v~~~Da~~~p 248 (646)
|..|| +.-|.|+...+++..+... ...|++++ .+..++..+...+. ..+ .++.++..|.+...
T Consensus 9 ~k~~l-VTGas~GIG~aia~~la~~------G~~V~~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 9 VPVAL-VTGAAKRLGRSIAEGLHAE------GYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVA 73 (291)
T ss_dssp CCEEE-ETTCSSHHHHHHHHHHHHT------TCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSC
T ss_pred CCEEE-EECCCchHHHHHHHHHHHC------CCeEEEEcCCCHHHHHHHHHHHhhhcC-CeeEEEEeecCCcc
Confidence 44555 5556688888888887532 34788999 99988887777665 444 35777888887654
No 479
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=48.08 E-value=51 Score=35.68 Aligned_cols=122 Identities=13% Similarity=0.005 Sum_probs=68.7
Q ss_pred EcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHH------------HHc-CCCCeEEEecCCCCCccc
Q psy17365 184 MCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQA------------KRL-NSPCAIITNHDASVMPNV 250 (646)
Q Consensus 184 mCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~------------~rl-g~~ni~v~~~Da~~~p~~ 250 (646)
..-|.|...+.+|..+.. ..-.|++.|+++++++.+.+.. ++. ...++.++ .|...
T Consensus 12 ~vIGlG~vG~~~A~~La~------~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~t-td~~e---- 80 (446)
T 4a7p_A 12 AMIGTGYVGLVSGACFSD------FGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFT-TDLAE---- 80 (446)
T ss_dssp EEECCSHHHHHHHHHHHH------TTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEE-SCHHH----
T ss_pred EEEcCCHHHHHHHHHHHH------CCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEE-CCHHH----
Confidence 455788888888887752 1237999999999988775420 000 00122222 11100
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEcCCCCcccc
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLED 330 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYSTCSl~p~EN 330 (646)
.....|.|++=+|-..+. -...||+ .. -+..++...+.|++|-.+|+. .|+.|.-.
T Consensus 81 ---------a~~~aDvvii~Vptp~~~-~~~~~Dl------------~~-v~~v~~~i~~~l~~g~iVV~~-STv~pgtt 136 (446)
T 4a7p_A 81 ---------GVKDADAVFIAVGTPSRR-GDGHADL------------SY-VFAAAREIAENLTKPSVIVTK-STVPVGTG 136 (446)
T ss_dssp ---------HHTTCSEEEECCCCCBCT-TTCCBCT------------HH-HHHHHHHHHHSCCSCCEEEEC-SCCCTTHH
T ss_pred ---------HHhcCCEEEEEcCCCCcc-ccCCccH------------HH-HHHHHHHHHHhcCCCCEEEEe-CCCCchHH
Confidence 013478888876643210 0123443 11 123445666788887777764 48888888
Q ss_pred HHHHHHHHHH
Q psy17365 331 EAVIQRLIVE 340 (646)
Q Consensus 331 E~VV~~~L~~ 340 (646)
+.+...+.+.
T Consensus 137 ~~l~~~l~e~ 146 (446)
T 4a7p_A 137 DEVERIIAEV 146 (446)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 8776655444
No 480
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=47.14 E-value=40 Score=33.67 Aligned_cols=134 Identities=7% Similarity=-0.023 Sum_probs=70.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHH-HHHHHHHHHHHcCCCCeEEEecCCCCCccccccCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNN-RCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~-Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~ 255 (646)
.|.+||=.+ |.|+...+++..+... ...|+..+.+.. ..+.+.+.++..+ ..+.++..|.+........-.
T Consensus 46 ~gk~vlVTG-as~GIG~aia~~la~~------G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~ 117 (291)
T 3ijr_A 46 KGKNVLITG-GDSGIGRAVSIAFAKE------GANIAIAYLDEEGDANETKQYVEKEG-VKCVLLPGDLSDEQHCKDIVQ 117 (291)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHT------TCEEEEEESSCHHHHHHHHHHHHTTT-CCEEEEESCTTSHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHC------CCEEEEEeCCchHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHH
Confidence 355676555 5677888888877532 347888888765 3444555455544 357778888876422110000
Q ss_pred CCCCCCCCCCeeecCCCCCCC-ccccc-CccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 256 DGNKVPMKFDRVLCDVPCTGD-GTMRK-NPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~PCSG~-G~lrk-~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
.-.......|.++..+--... +.+.. .++ .|.. .......-...+++.++..++.+|++|+.+
T Consensus 118 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~---~~~~-~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 118 ETVRQLGSLNILVNNVAQQYPQQGLEYITAE---QLEK-TFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp HHHHHHSSCCEEEECCCCCCCCSSGGGCCHH---HHHH-HHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred HHHHHcCCCCEEEECCCCcCCCCCcccCCHH---HHHH-HHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 000012368988876532111 11110 111 1110 111112233467778888888899998764
No 481
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=47.05 E-value=95 Score=29.31 Aligned_cols=80 Identities=15% Similarity=0.058 Sum_probs=48.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
.+.+|| +.-|.|+...++++.+... ...|++++.+..++..+... . .++.++..|.+........ .
T Consensus 6 ~~~~vl-VTGasggiG~~~a~~l~~~------G~~V~~~~r~~~~~~~~~~~---~--~~~~~~~~D~~~~~~~~~~-~- 71 (244)
T 1cyd_A 6 SGLRAL-VTGAGKGIGRDTVKALHAS------GAKVVAVTRTNSDLVSLAKE---C--PGIEPVCVDLGDWDATEKA-L- 71 (244)
T ss_dssp TTCEEE-EESTTSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHH---S--TTCEEEECCTTCHHHHHHH-H-
T ss_pred CCCEEE-EeCCCchHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHh---c--cCCCcEEecCCCHHHHHHH-H-
Confidence 355666 4556788889998887532 34799999998876655432 2 3455667787654221100 0
Q ss_pred CCCCCCCCCeeecCCC
Q psy17365 257 GNKVPMKFDRVLCDVP 272 (646)
Q Consensus 257 g~~~~~~FD~IL~D~P 272 (646)
......|.|+..+-
T Consensus 72 --~~~~~id~vi~~Ag 85 (244)
T 1cyd_A 72 --GGIGPVDLLVNNAA 85 (244)
T ss_dssp --TTCCCCSEEEECCC
T ss_pred --HHcCCCCEEEECCc
Confidence 01235898888664
No 482
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=46.87 E-value=22 Score=34.39 Aligned_cols=63 Identities=16% Similarity=0.034 Sum_probs=40.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCC------CCeEEEecCCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNS------PCAIITNHDASVM 247 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~------~ni~v~~~Da~~~ 247 (646)
+.+|| +.-|.|+...+++..+... ...|++.+.+..++..+...+...+. .++.++..|.+..
T Consensus 7 ~k~vl-ITGasggiG~~la~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 75 (264)
T 2pd6_A 7 SALAL-VTGAGSGIGRAVSVRLAGE------GATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEA 75 (264)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHT------TCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSH
T ss_pred CCEEE-EECCCChHHHHHHHHHHHC------CCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCH
Confidence 44566 4556788888888877532 34799999998887766554433331 3567778887753
No 483
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=46.84 E-value=80 Score=31.00 Aligned_cols=87 Identities=10% Similarity=-0.053 Sum_probs=53.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
+..||=.+ |.|+...+++..+... ...|++++.+..+++.+...+...+. ++.++..|.+...........-
T Consensus 22 ~k~vlVTG-as~gIG~~ia~~l~~~------G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~v~~~~~~~ 93 (277)
T 2rhc_B 22 SEVALVTG-ATSGIGLEIARRLGKE------GLRVFVCARGEEGLRTTLKELREAGV-EADGRTCDVRSVPEIEALVAAV 93 (277)
T ss_dssp SCEEEEET-CSSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHH
Confidence 55666544 5688888888877532 34799999999888877777666553 4677788877532211000000
Q ss_pred CCCCCCCCeeecCCC
Q psy17365 258 NKVPMKFDRVLCDVP 272 (646)
Q Consensus 258 ~~~~~~FD~IL~D~P 272 (646)
.......|.|+..+-
T Consensus 94 ~~~~g~iD~lv~~Ag 108 (277)
T 2rhc_B 94 VERYGPVDVLVNNAG 108 (277)
T ss_dssp HHHTCSCSEEEECCC
T ss_pred HHHhCCCCEEEECCC
Confidence 001236898888663
No 484
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=46.82 E-value=43 Score=31.93 Aligned_cols=87 Identities=8% Similarity=0.003 Sum_probs=50.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEE-cCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVAN-DVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~-Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
+.+|| +.-|.|+...++++.+... ...|+++ +.+...+..+...+...+ .++.++..|.+...........
T Consensus 5 ~~~vl-ItGasggiG~~~a~~l~~~------G~~V~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~ 76 (247)
T 2hq1_A 5 GKTAI-VTGSSRGLGKAIAWKLGNM------GANIVLNGSPASTSLDATAEEFKAAG-INVVVAKGDVKNPEDVENMVKT 76 (247)
T ss_dssp TCEEE-ESSCSSHHHHHHHHHHHHT------TCEEEEEECTTCSHHHHHHHHHHHTT-CCEEEEESCTTSHHHHHHHHHH
T ss_pred CcEEE-EECCCchHHHHHHHHHHHC------CCEEEEEcCcCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHH
Confidence 45566 5556788899998887532 2367777 667777766666665554 3577788888764221100000
Q ss_pred CCCCCCCCCeeecCCC
Q psy17365 257 GNKVPMKFDRVLCDVP 272 (646)
Q Consensus 257 g~~~~~~FD~IL~D~P 272 (646)
-.......|.|+..+-
T Consensus 77 ~~~~~~~~d~vi~~Ag 92 (247)
T 2hq1_A 77 AMDAFGRIDILVNNAG 92 (247)
T ss_dssp HHHHHSCCCEEEECC-
T ss_pred HHHhcCCCCEEEECCC
Confidence 0000136899988764
No 485
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=46.73 E-value=42 Score=32.23 Aligned_cols=87 Identities=9% Similarity=0.034 Sum_probs=53.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
+.+|| +.-|.|+...++++.+... ...|++++.+..++..+...++..+. ++.++..|.+....+......-
T Consensus 13 ~k~vl-ItGasggiG~~la~~l~~~------G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~ 84 (260)
T 3awd_A 13 NRVAI-VTGGAQNIGLACVTALAEA------GARVIIADLDEAMATKAVEDLRMEGH-DVSSVVMDVTNTESVQNAVRSV 84 (260)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEE-EeCCCchHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHH
Confidence 55666 4456688889998887532 34799999999888777666665543 5777888887642211000000
Q ss_pred CCCCCCCCeeecCCC
Q psy17365 258 NKVPMKFDRVLCDVP 272 (646)
Q Consensus 258 ~~~~~~FD~IL~D~P 272 (646)
.......|.|+..+-
T Consensus 85 ~~~~~~id~vi~~Ag 99 (260)
T 3awd_A 85 HEQEGRVDILVACAG 99 (260)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 000135898887653
No 486
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=46.70 E-value=33 Score=33.15 Aligned_cols=82 Identities=16% Similarity=0.080 Sum_probs=47.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
|.+|| +.-|.|+...++++.+... ...|++.+.+..++..+.. .++ +.++..|.+...........-
T Consensus 5 ~k~vl-VTGas~giG~~ia~~l~~~------G~~V~~~~r~~~~~~~~~~---~~~---~~~~~~D~~~~~~~~~~~~~~ 71 (245)
T 1uls_A 5 DKAVL-ITGAAHGIGRATLELFAKE------GARLVACDIEEGPLREAAE---AVG---AHPVVMDVADPASVERGFAEA 71 (245)
T ss_dssp TCEEE-EESTTSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHH---TTT---CEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHH---HcC---CEEEEecCCCHHHHHHHHHHH
Confidence 44566 4556788888888877532 3478999999887765543 333 566777876532211000000
Q ss_pred CCCCCCCCeeecCCC
Q psy17365 258 NKVPMKFDRVLCDVP 272 (646)
Q Consensus 258 ~~~~~~FD~IL~D~P 272 (646)
.......|.++..+-
T Consensus 72 ~~~~g~id~lvn~Ag 86 (245)
T 1uls_A 72 LAHLGRLDGVVHYAG 86 (245)
T ss_dssp HHHHSSCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 001235898888664
No 487
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=46.41 E-value=50 Score=32.44 Aligned_cols=87 Identities=8% Similarity=-0.115 Sum_probs=53.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
|..||=.+ |.|+...+++..+... ...|++++.+..+++.+.+.+...+. ++.++..|.+...........-
T Consensus 21 ~k~vlVTG-as~gIG~aia~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~ 92 (273)
T 1ae1_A 21 GTTALVTG-GSKGIGYAIVEELAGL------GARVYTCSRNEKELDECLEIWREKGL-NVEGSVCDLLSRTERDKLMQTV 92 (273)
T ss_dssp TCEEEEES-CSSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEEC-CcchHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHH
Confidence 55666544 5678888888877532 34799999999888777666665543 4677788876532211000000
Q ss_pred CCCC-CCCCeeecCCC
Q psy17365 258 NKVP-MKFDRVLCDVP 272 (646)
Q Consensus 258 ~~~~-~~FD~IL~D~P 272 (646)
.... ...|.++..+-
T Consensus 93 ~~~~~g~id~lv~nAg 108 (273)
T 1ae1_A 93 AHVFDGKLNILVNNAG 108 (273)
T ss_dssp HHHTTSCCCEEEECCC
T ss_pred HHHcCCCCcEEEECCC
Confidence 0001 46898888763
No 488
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=46.25 E-value=35 Score=33.73 Aligned_cols=88 Identities=11% Similarity=0.023 Sum_probs=47.9
Q ss_pred CCCeEEEEcCCC-chHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCC
Q psy17365 177 THHKVLDMCAAP-GSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDA 255 (646)
Q Consensus 177 pg~~VLDmCAaP-GgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~ 255 (646)
.|.+||=.+|++ |+...+++..+... ...|++++.+......+.+-.+..+ ++.++..|.+..........
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~------G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~ 91 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHRE------GAQLAFTYATPKLEKRVREIAKGFG--SDLVVKCDVSLDEDIKNLKK 91 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHT------TCEEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHc------CCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHH
Confidence 366788777653 88888888877532 3478888888752222222222233 35667788765322110000
Q ss_pred CCCCCCCCCCeeecCCC
Q psy17365 256 DGNKVPMKFDRVLCDVP 272 (646)
Q Consensus 256 ~g~~~~~~FD~IL~D~P 272 (646)
.-.......|.|+..+-
T Consensus 92 ~~~~~~g~iD~lv~~Ag 108 (285)
T 2p91_A 92 FLEENWGSLDIIVHSIA 108 (285)
T ss_dssp HHHHHTSCCCEEEECCC
T ss_pred HHHHHcCCCCEEEECCC
Confidence 00001246898888764
No 489
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=46.23 E-value=43 Score=33.15 Aligned_cols=127 Identities=12% Similarity=0.075 Sum_probs=67.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
|.+||= .-|.|+...+++..+... ...|++.|.+..++..+... ++ ..+.++..|.+...........-
T Consensus 27 ~k~vlV-TGas~GIG~aia~~l~~~------G~~V~~~~r~~~~~~~~~~~---~~-~~~~~~~~Dv~d~~~v~~~~~~~ 95 (277)
T 4dqx_A 27 QRVCIV-TGGGSGIGRATAELFAKN------GAYVVVADVNEDAAVRVANE---IG-SKAFGVRVDVSSAKDAESMVEKT 95 (277)
T ss_dssp TCEEEE-ETTTSHHHHHHHHHHHHT------TCEEEEEESSHHHHHHHHHH---HC-TTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEE-ECCCcHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHH---hC-CceEEEEecCCCHHHHHHHHHHH
Confidence 455664 455677888888877532 34799999999887666544 33 34667778877642211000000
Q ss_pred CCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhh----hHHHHHHHHHHHHHhhcc--CCeEEEEc
Q psy17365 258 NKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNN----LHGIQYRIVKRGVEMLAV--GGKIAYST 322 (646)
Q Consensus 258 ~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~----l~~lQ~~IL~~A~~lLKp--GG~LVYST 322 (646)
.......|.++..+--+..+.+. ..+.++... ...-...+++.++..++. +|++|+.+
T Consensus 96 ~~~~g~iD~lv~nAg~~~~~~~~-------~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~is 159 (277)
T 4dqx_A 96 TAKWGRVDVLVNNAGFGTTGNVV-------TIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTT 159 (277)
T ss_dssp HHHHSCCCEEEECCCCCCCBCTT-------TSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEEC
T ss_pred HHHcCCCCEEEECCCcCCCCCcc-------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEC
Confidence 00123689888876433222211 112221111 112233456667776654 57888754
No 490
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=46.21 E-value=14 Score=48.63 Aligned_cols=102 Identities=18% Similarity=0.167 Sum_probs=58.5
Q ss_pred CCCCCCeEEEEcCCCchH---HHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccc
Q psy17365 174 DVQTHHKVLDMCAAPGSK---TAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNV 250 (646)
Q Consensus 174 d~~pg~~VLDmCAaPGgK---T~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~ 250 (646)
.+++|++||=.+ |.|+. ++|+|..+ ...|++.+.+.++.+.+++....+|...+ ++.....+...
T Consensus 1664 ~l~~Ge~VLI~g-aaGgVG~aAiqlAk~~---------Ga~Viat~~s~~k~~~l~~~~~~lga~~v--~~~~~~~~~~~ 1731 (2512)
T 2vz8_A 1664 RMQPGESVLIHS-GSGGVGQAAIAIALSR---------GCRVFTTVGSAEKRAYLQARFPQLDETCF--ANSRDTSFEQH 1731 (2512)
T ss_dssp CCCTTCEEEETT-TTSHHHHHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHCTTCCSTTE--EESSSSHHHHH
T ss_pred cCCCCCEEEEEe-CChHHHHHHHHHHHHc---------CCEEEEEeCChhhhHHHHhhcCCCCceEE--ecCCCHHHHHH
Confidence 578999999653 44444 45555543 24799999999888777654323454433 22222222110
Q ss_pred cccCCCCCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhhHHHHHHHHHHHHHhhccCCeEEE
Q psy17365 251 LYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAY 320 (646)
Q Consensus 251 ~~~~~~g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l~~lQ~~IL~~A~~lLKpGG~LVY 320 (646)
.....+| ..+|+||- |+| | ..+..++++|++||++|.
T Consensus 1732 i~~~t~g----~GvDvVld---~~g-~-------------------------~~l~~~l~~L~~~Gr~V~ 1768 (2512)
T 2vz8_A 1732 VLRHTAG----KGVDLVLN---SLA-E-------------------------EKLQASVRCLAQHGRFLE 1768 (2512)
T ss_dssp HHHTTTS----CCEEEEEE---CCC-H-------------------------HHHHHHHTTEEEEEEEEE
T ss_pred HHHhcCC----CCceEEEE---CCC-c-------------------------hHHHHHHHhcCCCcEEEE
Confidence 0000111 35888773 333 2 347788899999998874
No 491
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=46.09 E-value=44 Score=32.87 Aligned_cols=88 Identities=11% Similarity=0.062 Sum_probs=52.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcC-------------CHHHHHHHHHHHHHcCCCCeEEEecC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDV-------------DNNRCYMLVHQAKRLNSPCAIITNHD 243 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Di-------------s~~Rl~~L~~n~~rlg~~ni~v~~~D 243 (646)
.|..||=. -|.|+...+++..+... ...|+++|. +..++..+.+.+...+. .+.++..|
T Consensus 10 ~~k~~lVT-Gas~GIG~a~a~~la~~------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D 81 (277)
T 3tsc_A 10 EGRVAFIT-GAARGQGRAHAVRMAAE------GADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR-RIVAAVVD 81 (277)
T ss_dssp TTCEEEEE-STTSHHHHHHHHHHHHT------TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECC
T ss_pred CCCEEEEE-CCccHHHHHHHHHHHHc------CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECC
Confidence 35566644 45677788888877532 347888988 67777777776666553 57777888
Q ss_pred CCCCccccccCCCCCCCCCCCCeeecCCC
Q psy17365 244 ASVMPNVLYTDADGNKVPMKFDRVLCDVP 272 (646)
Q Consensus 244 a~~~p~~~~~~~~g~~~~~~FD~IL~D~P 272 (646)
.+...........-.......|.++..+-
T Consensus 82 ~~~~~~v~~~~~~~~~~~g~id~lvnnAg 110 (277)
T 3tsc_A 82 TRDFDRLRKVVDDGVAALGRLDIIVANAG 110 (277)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 87643211000000001246898888764
No 492
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=46.03 E-value=32 Score=32.67 Aligned_cols=82 Identities=16% Similarity=0.062 Sum_probs=48.3
Q ss_pred CeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCCC
Q psy17365 179 HKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADGN 258 (646)
Q Consensus 179 ~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g~ 258 (646)
.+|| +.-|.|+...+++..+... ...|++++.+..+++.+... ++ ++.++..|.+...........-.
T Consensus 6 k~vl-VtGasggiG~~~a~~l~~~------G~~V~~~~r~~~~~~~~~~~---~~--~~~~~~~D~~~~~~~~~~~~~~~ 73 (234)
T 2ehd_A 6 GAVL-ITGASRGIGEATARLLHAK------GYRVGLMARDEKRLQALAAE---LE--GALPLPGDVREEGDWARAVAAME 73 (234)
T ss_dssp CEEE-ESSTTSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHH---ST--TCEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEE-EECCCcHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHH---hh--hceEEEecCCCHHHHHHHHHHHH
Confidence 3455 5667789999999887532 34789999998877655443 22 56777788775322110000000
Q ss_pred CCCCCCCeeecCCC
Q psy17365 259 KVPMKFDRVLCDVP 272 (646)
Q Consensus 259 ~~~~~FD~IL~D~P 272 (646)
.....+|.|+..+-
T Consensus 74 ~~~~~id~li~~Ag 87 (234)
T 2ehd_A 74 EAFGELSALVNNAG 87 (234)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 00135898887653
No 493
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=46.01 E-value=68 Score=29.81 Aligned_cols=70 Identities=14% Similarity=0.076 Sum_probs=46.3
Q ss_pred eEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCCCC
Q psy17365 180 KVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADGNK 259 (646)
Q Consensus 180 ~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g~~ 259 (646)
+|| +.-|+|+...++++.+... .-.|++.+.++.++..+ ...++.++.+|.+.... .
T Consensus 2 kil-VtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~-------~~~~~~~~~~D~~d~~~---------~ 58 (224)
T 3h2s_A 2 KIA-VLGATGRAGSAIVAEARRR------GHEVLAVVRDPQKAADR-------LGATVATLVKEPLVLTE---------A 58 (224)
T ss_dssp EEE-EETTTSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHH-------TCTTSEEEECCGGGCCH---------H
T ss_pred EEE-EEcCCCHHHHHHHHHHHHC------CCEEEEEEecccccccc-------cCCCceEEecccccccH---------h
Confidence 444 3456788999999887532 34799999998875533 22467888888876432 1
Q ss_pred CCCCCCeeecCCC
Q psy17365 260 VPMKFDRVLCDVP 272 (646)
Q Consensus 260 ~~~~FD~IL~D~P 272 (646)
....+|.|+.-+.
T Consensus 59 ~~~~~d~vi~~ag 71 (224)
T 3h2s_A 59 DLDSVDAVVDALS 71 (224)
T ss_dssp HHTTCSEEEECCC
T ss_pred hcccCCEEEECCc
Confidence 1246898887543
No 494
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=45.98 E-value=47 Score=32.75 Aligned_cols=130 Identities=15% Similarity=0.153 Sum_probs=68.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHH-HHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNN-RCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~-Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
|..|| +.-|.|+...+++..+... ...|++.+.+.. .++.+.+.+...+. ++.++..|.+...........
T Consensus 29 ~k~vl-VTGas~gIG~~ia~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~ 100 (283)
T 1g0o_A 29 GKVAL-VTGAGRGIGREMAMELGRR------GCKVIVNYANSTESAEEVVAAIKKNGS-DAACVKANVGVVEDIVRMFEE 100 (283)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHT------TCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHC------CCEEEEEeCCchHHHHHHHHHHHHhCC-CeEEEEcCCCCHHHHHHHHHH
Confidence 44555 5556788889998887632 347888888764 35555555555553 466777887653221100000
Q ss_pred CCCCCCCCCeeecCCCCCCCcccccCccccccCCcchhh----hhHHHHHHHHHHHHHhhccCCeEEEEc
Q psy17365 257 GNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGN----NLHGIQYRIVKRGVEMLAVGGKIAYST 322 (646)
Q Consensus 257 g~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~----~l~~lQ~~IL~~A~~lLKpGG~LVYST 322 (646)
-.......|.|+..+--...+.+. ..+.++.. ....-...+++.++..++.+|++|+.+
T Consensus 101 ~~~~~g~iD~lv~~Ag~~~~~~~~-------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 101 AVKIFGKLDIVCSNSGVVSFGHVK-------DVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGG-------GCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred HHHHcCCCCEEEECCCcCCCCCcc-------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 000113689888766322222111 11111111 111223456677777777788888764
No 495
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=45.93 E-value=51 Score=31.75 Aligned_cols=129 Identities=10% Similarity=0.042 Sum_probs=68.9
Q ss_pred CeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcC-CHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 179 HKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDV-DNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 179 ~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Di-s~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
.+|| +.-|.|+...+++..+... ...|+.++. +..+++.+.+.++..+. .+.++..|.+........-..-
T Consensus 5 k~~l-VTGas~gIG~~ia~~l~~~------G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~ 76 (246)
T 3osu_A 5 KSAL-VTGASRGIGRSIALQLAEE------GYNVAVNYAGSKEKAEAVVEEIKAKGV-DSFAIQANVADADEVKAMIKEV 76 (246)
T ss_dssp CEEE-ETTCSSHHHHHHHHHHHHT------TCEEEEEESSCHHHHHHHHHHHHHTTS-CEEEEECCTTCHHHHHHHHHHH
T ss_pred CEEE-EECCCChHHHHHHHHHHHC------CCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHH
Confidence 3444 5666788888888887532 236767666 66788877777776654 4667788877643211000000
Q ss_pred CCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhh----hHHHHHHHHHHHHHhh--ccCCeEEEEc
Q psy17365 258 NKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNN----LHGIQYRIVKRGVEML--AVGGKIAYST 322 (646)
Q Consensus 258 ~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~----l~~lQ~~IL~~A~~lL--KpGG~LVYST 322 (646)
.......|.++..+--+..+.+.. .+.++... ...-...+++.++..+ +.+|++|+.+
T Consensus 77 ~~~~g~id~lv~nAg~~~~~~~~~-------~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~is 140 (246)
T 3osu_A 77 VSQFGSLDVLVNNAGITRDNLLMR-------MKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLS 140 (246)
T ss_dssp HHHHSCCCEEEECCCCCCCCCTTT-------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred HHHcCCCCEEEECCCCCCCCCccc-------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 001236898888764333332211 11111111 1112234556666655 3568888754
No 496
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=45.87 E-value=44 Score=33.18 Aligned_cols=127 Identities=10% Similarity=0.043 Sum_probs=67.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
|.+|| +.-|.|+...+++..+... ...|+++|.+..++..+...+ + ..+.++..|.+........-..-
T Consensus 29 gk~vl-VTGas~gIG~aia~~la~~------G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~d~~~v~~~~~~~ 97 (277)
T 3gvc_A 29 GKVAI-VTGAGAGIGLAVARRLADE------GCHVLCADIDGDAADAAATKI---G-CGAAACRVDVSDEQQIIAMVDAC 97 (277)
T ss_dssp TCEEE-ETTTTSTHHHHHHHHHHHT------TCEEEEEESSHHHHHHHHHHH---C-SSCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHc---C-CcceEEEecCCCHHHHHHHHHHH
Confidence 55566 5556677888888877532 347999999998877665544 3 34677788887643211000000
Q ss_pred CCCCCCCCeeecCCCCCCCcccccCccccccCCcchhhhh----HHHHHHHHHHHHHhh--ccCCeEEEEc
Q psy17365 258 NKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNL----HGIQYRIVKRGVEML--AVGGKIAYST 322 (646)
Q Consensus 258 ~~~~~~FD~IL~D~PCSG~G~lrk~pd~~~~w~~~~~~~l----~~lQ~~IL~~A~~lL--KpGG~LVYST 322 (646)
.......|.++..+--...+.+. ..+.++.... ..-...+++.++..+ +.+|++|+.+
T Consensus 98 ~~~~g~iD~lvnnAg~~~~~~~~-------~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~is 161 (277)
T 3gvc_A 98 VAAFGGVDKLVANAGVVHLASLI-------DTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLS 161 (277)
T ss_dssp HHHHSSCCEEEECCCCCCCBCTT-------TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHcCCCCEEEECCCCCCCCChh-------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEc
Confidence 00123689888765322222111 1122221111 122234556666655 4568888753
No 497
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=45.77 E-value=33 Score=34.14 Aligned_cols=87 Identities=14% Similarity=-0.074 Sum_probs=53.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCCC
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADG 257 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~g 257 (646)
+..||=. -|.|+...+++..+... ...|+++|.+..+++.+...+...+. .+.++..|.+...........-
T Consensus 28 ~k~~lVT-Gas~GIG~aia~~la~~------G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~ 99 (283)
T 3v8b_A 28 SPVALIT-GAGSGIGRATALALAAD------GVTVGALGRTRTEVEEVADEIVGAGG-QAIALEADVSDELQMRNAVRDL 99 (283)
T ss_dssp CCEEEEE-SCSSHHHHHHHHHHHHT------TCEEEEEESSHHHHHHHHHHHTTTTC-CEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEE-CCCCHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHH
Confidence 5566644 45677888888877532 34799999999998887777665443 4677888887642211000000
Q ss_pred CCCCCCCCeeecCCC
Q psy17365 258 NKVPMKFDRVLCDVP 272 (646)
Q Consensus 258 ~~~~~~FD~IL~D~P 272 (646)
.......|.++..+-
T Consensus 100 ~~~~g~iD~lVnnAg 114 (283)
T 3v8b_A 100 VLKFGHLDIVVANAG 114 (283)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHhCCCCEEEECCC
Confidence 001236898888664
No 498
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=45.62 E-value=2e+02 Score=28.96 Aligned_cols=63 Identities=21% Similarity=0.105 Sum_probs=45.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEc-CCHHHHHHHHHHHH-HcCCCCeEEEecCCCCCc
Q psy17365 178 HHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVAND-VDNNRCYMLVHQAK-RLNSPCAIITNHDASVMP 248 (646)
Q Consensus 178 g~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~D-is~~Rl~~L~~n~~-rlg~~ni~v~~~Da~~~p 248 (646)
|..|| +.-|.|+...+++..+... ...|++++ .+..++..+...+. ..+ .++.++..|.+...
T Consensus 46 ~k~~l-VTGas~GIG~aia~~La~~------G~~Vv~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~d~~ 110 (328)
T 2qhx_A 46 VPVAL-VTGAAKRLGRSIAEGLHAE------GYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVA 110 (328)
T ss_dssp CCEEE-ETTCSSHHHHHHHHHHHHT------TCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSC
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHC------CCEEEEEcCCCHHHHHHHHHHHHhhcC-CeEEEEEeeCCCch
Confidence 44555 5666788899999887532 34788899 99988887777665 444 45777888887653
No 499
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=44.94 E-value=40 Score=32.10 Aligned_cols=85 Identities=12% Similarity=-0.001 Sum_probs=50.6
Q ss_pred eEEEEcCCCchHHHHHHHHhhhcCCCCCCCc------EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCcccccc
Q psy17365 180 KVLDMCAAPGSKTAQIIEMIHAADSNPVPSG------LVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYT 253 (646)
Q Consensus 180 ~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G------~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~ 253 (646)
+|| +.-|.|+...+++..+... +.. .|++.+.+..++..+...+...+ .++.++..|.+........
T Consensus 4 ~vl-ITGasggiG~~la~~l~~~-----G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~ 76 (244)
T 2bd0_A 4 ILL-ITGAGKGIGRAIALEFARA-----ARHHPDFEPVLVLSSRTAADLEKISLECRAEG-ALTDTITADISDMADVRRL 76 (244)
T ss_dssp EEE-EETTTSHHHHHHHHHHHHH-----TTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT-CEEEEEECCTTSHHHHHHH
T ss_pred EEE-EECCCChHHHHHHHHHHHh-----cCcccccceEEEEEeCCHHHHHHHHHHHHccC-CeeeEEEecCCCHHHHHHH
Confidence 455 4556788888888877532 111 79999999988877776665443 3567788888753221100
Q ss_pred CCCCCCCCCCCCeeecCC
Q psy17365 254 DADGNKVPMKFDRVLCDV 271 (646)
Q Consensus 254 ~~~g~~~~~~FD~IL~D~ 271 (646)
...-.......|.|+..+
T Consensus 77 ~~~~~~~~g~id~li~~A 94 (244)
T 2bd0_A 77 TTHIVERYGHIDCLVNNA 94 (244)
T ss_dssp HHHHHHHTSCCSEEEECC
T ss_pred HHHHHHhCCCCCEEEEcC
Confidence 000000123689888765
No 500
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=44.71 E-value=40 Score=33.30 Aligned_cols=89 Identities=10% Similarity=0.010 Sum_probs=53.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhhhcCCCCCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEecCCCCCccccccCCC
Q psy17365 177 THHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDAD 256 (646)
Q Consensus 177 pg~~VLDmCAaPGgKT~~lae~l~~~~~~~~~~G~VvA~Dis~~Rl~~L~~n~~rlg~~ni~v~~~Da~~~p~~~~~~~~ 256 (646)
.|.+||=. -|.|+...++++.+... ...|+..+.+..++..+...+....-.++.++..|.+........-..
T Consensus 26 ~~k~~lVT-Gas~GIG~aia~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 98 (277)
T 4fc7_A 26 RDKVAFIT-GGGSGIGFRIAEIFMRH------GCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQ 98 (277)
T ss_dssp TTCEEEEE-TTTSHHHHHHHHHHHTT------TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEe-CCCchHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 35566644 45678888888887621 337999999998887776666443224577888888764221100000
Q ss_pred CCCCCCCCCeeecCCC
Q psy17365 257 GNKVPMKFDRVLCDVP 272 (646)
Q Consensus 257 g~~~~~~FD~IL~D~P 272 (646)
-.......|.++..+-
T Consensus 99 ~~~~~g~id~lv~nAg 114 (277)
T 4fc7_A 99 ALKEFGRIDILINCAA 114 (277)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCc
Confidence 0001236898887663
Done!