Diaphorina citri psyllid: psy17365

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640------
MAKGRRFHNRNKSFAQKRREKEQKKANPKTDTRHENYAEIVRENKDFEQYYKAQKICPENEWDSMLETLKKDLPTAFRITNCSPEEAKALLSIVESKFFKELVNDQETSEEEKVAPICLPWYPEQMGWQLQLSRRAIRTSQAFSKLHQFLIMENATGHISRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAVIQRLIVETQGAVQLVDVSAITPALKYAPGLSQWRPASKDNLDGYGSFDEVPDKWKTQVRPQMFPTGDPSHHLERCSVFGLLPHQQGPRADNGEAESKPEPEASSPTREPPSKKRKRQPQGYKEDPFVFFNTDEAVWPPIRDFYEISPSLPVDCLLTRCLVGKKKIIYFTSPMVKNIIQSNENNLKIINTGVKSFARCDNKVMGCAFRFCQEGLSSMKAFIGEKRKVRVNREELITILNNSTPEQPTDLELLRPETRQTLTREGFGVGSCLLELQDDLPLSLVGWRGKSSVRAYISGSDLVHYLRLLGADVSKF
ccccccccccccHHHHHHHHHHHcccccccccccccHHHHHHHcHHHHHHHHHcccccHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEcccccccccHHHHHHHHHHHHccccccCEEEcccccccccccccccccEEEEcccccccHHHHHHHHHHcccccccccEEEEEEccccHHHHHHHHHHHccccccEEEEcccccccccccccccccccccccccEEEEccccccccccccccHHHHHcccccccccHHHHHHHHHHHHHccccccEEEEEcccccccccHHHHHHHHHHccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccEEEEcccccEEEEEEccHHHHHHHHHcccccEEEEccEEEEEEEccccccccEEEccccHHHHHHHHccccEEEEcHHHHHHHHHcccccccccccccccHHHHHHHHcccccEEEEEEECccccEEEEEEECccEEEEcccHHHHHHHHHHHccccccc
*************************************AEIVRENKDFEQYYKAQKICPENEWDSMLETLKKDLPTAFRITNCSPEEAKALLSIVESKFFKELVNDQETSEEEKVAPICLPWYPEQMGWQLQLSRRAIRTSQAFSKLHQFLIMENATGHISRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAVIQRLIVETQGAVQLVDVSAITPALKYAPGLSQWRPASKDNLDGYGSFDEVP**********MFPTGDPSHHLERCSVFGLL*******************************************PFVFFNTDEAVWPPIRDFYEISPSLPVDCLLTRCLVGKKKIIYFTSPMVKNIIQSNENNLKIINTGVKSFARCDNKVMGCAFRFCQEGLSSMKAFIGEKRKVRVNREELITILNNSTPEQPTDLELLRPETRQTLTREGFGVGSCLLELQDDLPLSLVGWRGKSSVRAYISGSDLVHYLRLLGADVSKF
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MAKGRRFHNRNKSFAQKRREKEQKKANPKTDTRHENYAEIVRENKDFEQYYKAQKICPENEWDSMLETLKKDLPTAFRITNCSPEEAKALLSIVESKFFKELVNDQETSEEEKVAPICLPWYPEQMGWQLQLSRRAIRTSQAFSKLHQFLIMENATGHISRQEAVSMIPPLLLDVQTHHKVLDMCAAPGSKTAQIIEMIHAADSNPVPSGLVVANDVDNNRCYMLVHQAKRLNSPCAIITNHDASVMPNVLYTDADGNKVPMKFDRVLCDVPCTGDGTMRKNPDIWTKWTPSNGNNLHGIQYRIVKRGVEMLAVGGKIAYSTCSLNPLEDEAVIQRLIVETQGAVQLVDVSAITPALKYAPGLSQWRPASKDNLDGYGSFDEVPDKWKTQVRPQMFPTGDPSHHLERCSVFGLLPHQQGPRADNGEAESKPEPEASSPTREPPSKKRKRQPQGYKEDPFVFFNTDEAVWPPIRDFYEISPSLPVDCLLTRCLVGKKKIIYFTSPMVKNIIQSNENNLKIINTGVKSFARCDNKVMGCAFRFCQEGLSSMKAFIGEKRKVRVNREELITILNNSTPEQPTDLELLRPETRQTLTREGFGVGSCLLELQDDLPLSLVGWRGKSSVRAYISGSDLVHYLRLLGADVSKF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Multisite-specific tRNA:(cytosine-C(5))-methyltransferase Methylates cytosine to m5C at several positions in different tRNAs and pre-tRNAs containing intron. Able to modify tRNAs at all four positions (34, 40, 48 and 49) at which m5C has been found in tRNAs. May be involved in ribosome biogenesis as its disruption leads to increased sensitivity to the antibiotic paromomycin.confidentP38205
Multisite-specific tRNA:(cytosine-C(5))-methyltransferase trm4a Methylates cytosine to m5C at several positions in different tRNAs and pre-tRNAs containing intron. Able to modify tRNAs at all four positions (34, 40, 48 and 49) at which m5C has been found in tRNAs.confidentQ9HGQ2
tRNA (cytosine(34)-C(5))-methyltransferase RNA methyltransferase that methylates tRNAs, and possibly RNA polymerase III transcripts. Methylates cytosine to 5-methylcytosine (m5C) at position 34 of intron-containing tRNA(Leu)(CAA) precursors. Not able to modify tRNAs at positions 48 or 49 (By similarity). May act downstream of Myc to regulate epidermal cell growth and proliferation. Required for proper spindle assembly and chromosome segregation, independently of its methyltransferase activity.confidentQ1HFZ0

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0000003 [BP]reproductionprobableGO:0008150
GO:0044444 [CC]cytoplasmic partprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0030488 [BP]tRNA methylationprobableGO:0009451, GO:0090304, GO:0034641, GO:0006807, GO:0034660, GO:1901360, GO:0034470, GO:0006139, GO:0044260, GO:0071704, GO:0010467, GO:0006400, GO:0032259, GO:0008033, GO:0009987, GO:0006725, GO:0043412, GO:0043414, GO:0008152, GO:0001510, GO:0046483, GO:0016070, GO:0044238, GO:0044237, GO:0043170, GO:0006399, GO:0008150, GO:0006396
GO:0016428 [MF]tRNA (cytosine-5-)-methyltransferase activityprobableGO:0003824, GO:0016427, GO:0008757, GO:0008173, GO:0016740, GO:0016741, GO:0003674, GO:0008175, GO:0008168

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.1.-.-Transferring one-carbon groups.probable
2.1.1.-15-hydroxyprostaglandin-I dehydrogenase (NADP(+)).probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3M4X, chain A
Confidence level:very confident
Coverage over the Query: 45-100,113-143,155-369,398-440,458-585,596-629
View the alignment between query and template
View the model in PyMOL
Template: 2B9E, chain A
Confidence level:very confident
Coverage over the Query: 72-143,155-275,292-352,365-377,394-427
View the alignment between query and template
View the model in PyMOL
Template: 2FRX, chain A
Confidence level:very confident
Coverage over the Query: 44-99,115-143,155-366,403-630
View the alignment between query and template
View the model in PyMOL