Query psy17366
Match_columns 91
No_of_seqs 108 out of 1048
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 20:33:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17366.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17366hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kin_B Kinesin heavy chain; mo 99.9 3.7E-25 1.3E-29 141.6 5.6 79 3-83 25-114 (117)
2 2kin_B Kinesin; motor protein, 99.9 4.9E-25 1.7E-29 137.7 3.1 70 3-74 29-99 (100)
3 3cob_A Kinesin heavy chain-lik 99.9 4.5E-23 1.6E-27 152.8 4.7 78 3-84 280-357 (369)
4 3b6u_A Kinesin-like protein KI 99.9 2.1E-22 7.2E-27 149.4 5.3 67 3-71 306-372 (372)
5 2y65_A Kinesin, kinesin heavy 99.9 1.7E-22 5.8E-27 149.5 4.3 75 3-79 286-361 (365)
6 3bfn_A Kinesin-like protein KI 99.8 4E-22 1.4E-26 148.6 3.3 67 3-71 300-366 (388)
7 2vvg_A Kinesin-2; motor protei 99.8 1.3E-21 4.3E-26 144.2 3.3 60 3-64 288-347 (350)
8 1x88_A Kinesin-like protein KI 99.8 6.1E-21 2.1E-25 140.9 4.9 56 3-60 303-358 (359)
9 1goj_A Kinesin, kinesin heavy 99.8 9.9E-21 3.4E-25 139.6 5.0 61 3-65 283-343 (355)
10 2wbe_C Bipolar kinesin KRP-130 99.8 7.1E-21 2.4E-25 141.1 1.8 58 3-62 314-371 (373)
11 2owm_A Nckin3-434, related to 99.8 4.7E-20 1.6E-24 139.3 5.7 59 3-65 368-427 (443)
12 1t5c_A CENP-E protein, centrom 99.8 3.4E-20 1.2E-24 136.5 4.7 59 3-65 283-341 (349)
13 2zfi_A Kinesin-like protein KI 99.8 4.1E-20 1.4E-24 136.7 4.1 56 3-60 307-362 (366)
14 1ry6_A Internal kinesin; kines 99.8 6.4E-20 2.2E-24 135.6 4.0 56 3-60 284-339 (360)
15 3lre_A Kinesin-like protein KI 99.7 1E-18 3.4E-23 128.9 4.5 48 3-52 308-355 (355)
16 3t0q_A AGR253WP; kinesin, alph 99.7 1.4E-18 4.7E-23 127.8 4.6 52 3-56 297-348 (349)
17 1f9v_A Kinesin-like protein KA 99.7 7.8E-19 2.7E-23 129.1 3.0 53 3-57 294-346 (347)
18 3nwn_A Kinesin-like protein KI 99.7 7E-19 2.4E-23 130.0 2.6 48 3-52 312-359 (359)
19 1bg2_A Kinesin; motor protein, 99.7 1.4E-18 4.8E-23 126.8 3.9 48 3-52 278-325 (325)
20 3dc4_A Kinesin-like protein NO 99.7 2.9E-18 1E-22 126.0 5.3 53 3-57 288-340 (344)
21 4etp_A Kinesin-like protein KA 99.7 2.1E-18 7E-23 129.0 4.5 53 3-57 350-402 (403)
22 2nr8_A Kinesin-like protein KI 99.7 1.8E-18 6.3E-23 127.7 2.6 48 3-52 311-358 (358)
23 2heh_A KIF2C protein; kinesin, 99.7 3.6E-18 1.2E-22 127.3 4.2 51 3-55 334-385 (387)
24 2h58_A Kinesin-like protein KI 99.7 2.1E-18 7.1E-23 126.1 2.6 49 3-53 281-329 (330)
25 3u06_A Protein claret segregat 99.7 7.5E-18 2.6E-22 126.3 4.5 53 3-57 335-387 (412)
26 4a14_A Kinesin, kinesin-like p 99.7 7.6E-18 2.6E-22 123.6 4.4 46 3-50 299-344 (344)
27 2rep_A Kinesin-like protein KI 99.7 9.8E-18 3.4E-22 124.5 4.6 48 3-52 329-376 (376)
28 1v8k_A Kinesin-like protein KI 99.7 4.5E-18 1.5E-22 127.5 2.7 53 3-57 354-407 (410)
29 4h1g_A Maltose binding protein 99.7 1E-17 3.5E-22 131.6 4.2 49 3-53 664-712 (715)
30 3gbj_A KIF13B protein; kinesin 99.7 7.7E-18 2.6E-22 124.1 2.6 47 3-51 303-349 (354)
31 3vp9_A General transcriptional 60.3 3 0.0001 25.0 1.0 24 65-88 68-91 (92)
32 4dzn_A Coiled-coil peptide CC- 53.8 17 0.00058 17.1 3.3 18 66-83 10-27 (33)
33 1use_A VAsp, vasodilator-stimu 52.6 19 0.00066 18.6 3.2 21 63-83 13-33 (45)
34 1go4_E MAD1 (mitotic arrest de 46.7 21 0.00073 21.5 3.2 24 64-87 74-97 (100)
35 3nmd_A CGMP dependent protein 45.7 35 0.0012 19.3 3.9 25 64-88 46-70 (72)
36 3he5_B Synzip2; heterodimeric 44.9 23 0.00079 18.3 2.7 20 64-83 30-49 (52)
37 2er8_A Regulatory protein Leu3 43.6 30 0.001 18.5 3.4 24 63-86 47-70 (72)
38 3ra3_B P2F; coiled coil domain 43.5 24 0.00083 16.0 2.4 17 68-84 10-26 (28)
39 2lw9_A Unconventionnal myosin- 40.8 36 0.0012 17.9 3.1 21 63-83 4-24 (51)
40 3he5_A Synzip1; heterodimeric 40.1 33 0.0011 17.5 2.8 19 64-82 30-48 (49)
41 3twe_A Alpha4H; unknown functi 39.2 28 0.00097 15.6 2.2 17 66-82 9-25 (27)
42 2wuj_A Septum site-determining 37.9 40 0.0014 17.9 3.2 23 65-87 34-56 (57)
43 2a3d_A Protein (de novo three- 36.1 51 0.0017 18.0 3.4 43 44-87 6-48 (73)
44 2ki0_A DS119; beta-alpha-beta, 35.8 37 0.0012 16.2 2.4 19 72-90 15-33 (36)
45 3i00_A HIP-I, huntingtin-inter 35.0 47 0.0016 20.5 3.6 25 59-83 9-33 (120)
46 1a93_B MAX protein, coiled coi 30.2 53 0.0018 15.9 2.9 20 65-84 14-33 (34)
47 1pyi_A Protein (pyrimidine pat 29.3 69 0.0024 17.9 3.5 25 64-88 47-71 (96)
48 1zme_C Proline utilization tra 28.6 21 0.0007 19.0 1.0 21 65-85 44-64 (70)
49 2wg5_A General control protein 28.6 39 0.0013 20.2 2.4 24 65-88 14-37 (109)
50 2ynq_A ESSB; membrane protein, 27.4 40 0.0014 22.0 2.3 38 48-85 112-149 (161)
51 3lay_A Zinc resistance-associa 27.1 1.3E+02 0.0044 19.6 4.9 24 60-83 108-131 (175)
52 1kd8_A GABH AIV, GCN4 acid bas 26.0 40 0.0014 16.5 1.7 18 67-84 17-34 (36)
53 1deb_A APC protein, adenomatou 25.6 19 0.00067 19.1 0.5 20 66-85 11-30 (54)
54 1got_G GT-gamma; complex (GTP- 25.6 40 0.0014 19.0 1.9 24 66-89 18-41 (73)
55 3ni0_A Bone marrow stromal ant 24.7 71 0.0024 19.1 2.9 20 65-84 67-86 (99)
56 2lw1_A ABC transporter ATP-bin 24.1 94 0.0032 17.6 3.4 21 65-85 29-49 (89)
57 3mq7_A Bone marrow stromal ant 23.9 72 0.0025 19.8 2.9 21 65-85 71-91 (121)
58 2yy0_A C-MYC-binding protein; 23.7 88 0.003 16.3 3.2 16 67-82 35-50 (53)
59 2kgn_A Protein STE5; MAPKKK, S 22.8 17 0.00058 16.2 -0.1 14 3-16 5-18 (26)
60 3m91_A Proteasome-associated A 22.5 95 0.0032 16.2 3.3 20 65-84 30-49 (51)
61 1kd8_B GABH BLL, GCN4 acid bas 20.6 84 0.0029 15.3 2.2 17 68-84 18-34 (36)
No 1
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9
Probab=99.91 E-value=3.7e-25 Score=141.64 Aligned_cols=79 Identities=28% Similarity=0.271 Sum_probs=65.9
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhhhccceecCCchHHH-----------HHHHH
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNARI-----------IRELR 71 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I~~~~~~n~~~~~~~-----------i~~l~ 71 (91)
-+|+||+||+ |||||||+|+||+||+|+..+++||++||+||+|||.|+|.|.+|.++..+. +..|+
T Consensus 25 RdSkLT~lL~--dsLggn~~t~~i~~isp~~~~~~eTl~TL~fa~rak~i~n~~~~n~~~~~~~l~~~~~~e~~~~~~L~ 102 (117)
T 3kin_B 25 RDSKMTRILQ--DSLGGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNTVSVNLELTAEEWKKKYEKEKEKNKALK 102 (117)
T ss_dssp GGSHHHHHTH--HHHHSSSEEEEEEEECCSGGGHHHHHHHHHHHHHHTTCEEEECCCBCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHH--HHcCCCccceeeeeeCCCcccHHHHHHHHHHHHHhCcccCCceecCcCCHHHHHHHHHHHHHHHHHHH
Confidence 4789999999 9999999999999999999999999999999999999999999999765432 34455
Q ss_pred HHHHHHHHHHHh
Q psy17366 72 QEVDKLKEMLIS 83 (91)
Q Consensus 72 ~ei~~L~~~L~~ 83 (91)
++++.|+.+|..
T Consensus 103 ~~i~~Le~el~~ 114 (117)
T 3kin_B 103 SVIQHLEVELNR 114 (117)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555555555543
No 2
>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9
Probab=99.90 E-value=4.9e-25 Score=137.71 Aligned_cols=70 Identities=29% Similarity=0.285 Sum_probs=62.6
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhhhccceecCCchHH-HHHHHHHHH
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNAR-IIRELRQEV 74 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I~~~~~~n~~~~~~-~i~~l~~ei 74 (91)
-+|+||+||+ |||||||+|+||+||+|+..+++||++||+||+|||.|++.|.+|++...+ .++++++|+
T Consensus 29 RdSkLT~lL~--dsLgGnskt~mi~~vsp~~~~~~ETl~TL~fA~rak~i~~~~~~n~~~~~~~l~~~~~~e~ 99 (100)
T 2kin_B 29 RDSKMTRILQ--DSLDGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNTVSVNLELTAEEWKKKYEKEK 99 (100)
T ss_dssp GGCHHHHHTH--HHHHSSEEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCEEEECCEEECCHHHHHHHHHHHH
T ss_pred ccchHHHHHH--HHhcCCCceeEEEEeCcccchHHHHHHHHHHHHHHHhccCcceeccCCCHHHHHHHHHHhh
Confidence 4789999999 999999999999999999999999999999999999999999999976654 455566665
No 3
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=99.87 E-value=4.5e-23 Score=152.81 Aligned_cols=78 Identities=29% Similarity=0.360 Sum_probs=66.3
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhhhccceecCCchHHHHHHHHHHHHHHHHHHH
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNARIIRELRQEVDKLKEMLI 82 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I~~~~~~n~~~~~~~i~~l~~ei~~L~~~L~ 82 (91)
-+|+||+||+ |||||||+|+||+||||+..+++||++||+||+|||.|+|.|.+|.++ +.|.+|+++++.++.+..
T Consensus 280 RdSkLT~lLq--dsLgGnskt~mIa~isP~~~~~~ETl~TLrfA~rak~i~~~~~~n~~~--~ei~~L~~~l~~~~~~~~ 355 (369)
T 3cob_A 280 RNHKLTMLMS--DSLGGNAKTLMFVNISPAESNLDETHNSLTYASRVRSIVNDPSKNVSS--KEVARLKKLVSYWKEQAG 355 (369)
T ss_dssp GGCHHHHHTT--TTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCEEC--HHHHHHHHHTTCC-----
T ss_pred cCCHHHHHHH--HhcCCCccEEEEEEeCCccccHHHHHHHHHHHHHHhhcccCCcccCCH--HHHHHHHHHHHHHHHhcC
Confidence 4789999999 999999999999999999999999999999999999999999999988 567788888887777654
Q ss_pred hc
Q psy17366 83 SA 84 (91)
Q Consensus 83 ~~ 84 (91)
..
T Consensus 356 ~~ 357 (369)
T 3cob_A 356 RK 357 (369)
T ss_dssp --
T ss_pred CC
Confidence 43
No 4
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=99.86 E-value=2.1e-22 Score=149.39 Aligned_cols=67 Identities=49% Similarity=0.637 Sum_probs=54.5
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhhhccceecCCchHHHHHHHH
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNARIIRELR 71 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I~~~~~~n~~~~~~~i~~l~ 71 (91)
-+|+||+||+ |||||||+|+||+||||+..+++||++||+||+|||.|+|.|.+|+++...++++|+
T Consensus 306 RdSkLT~lLq--dsLgGnskt~mIa~vsP~~~~~~ETlsTLrfA~rak~I~n~~~~n~~~~~~~~~~~~ 372 (372)
T 3b6u_A 306 RDSKLTRLLQ--DSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVNEDPKDALLREFQ 372 (372)
T ss_dssp GGSHHHHHTT--TTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCC-----------
T ss_pred cccHHHHHHH--HhcCCCccEEEEEEeCCcccCHHHHHHHHHHHHHHhhccccceecCChHHHHHHhcC
Confidence 4789999999 999999999999999999999999999999999999999999999998877777653
No 5
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=99.86 E-value=1.7e-22 Score=149.52 Aligned_cols=75 Identities=32% Similarity=0.321 Sum_probs=59.6
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhhhccceecCCchHH-HHHHHHHHHHHHHH
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNAR-IIRELRQEVDKLKE 79 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I~~~~~~n~~~~~~-~i~~l~~ei~~L~~ 79 (91)
-+|+||+||+ |||||||+|+||+||||+..+++||++||+||+|||.|+|.|.+|+++..+ .++.+++|+++++.
T Consensus 286 RdSkLT~lLq--dsLgGnskt~mI~~isP~~~~~~ETl~TL~fA~rak~I~n~~~~n~~~~~~~~~~~~~~e~~~~~~ 361 (365)
T 2y65_A 286 RDSKLTRILQ--ESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKNAR 361 (365)
T ss_dssp GGCHHHHHTG--GGTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCEEECCCEEECCSHHHHHC----------
T ss_pred ccCHHHHHHH--hhcCCCccEEEEEEecCccCCHHHHHHHHHHHHHHhcccCcceeCCCCCHHHHHHHHHHHHHHHHH
Confidence 4789999999 999999999999999999999999999999999999999999999977654 45557777776653
No 6
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=99.84 E-value=4e-22 Score=148.56 Aligned_cols=67 Identities=21% Similarity=0.401 Sum_probs=47.5
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhhhccceecCCchHHHHHHHH
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNARIIRELR 71 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I~~~~~~n~~~~~~~i~~l~ 71 (91)
-+|+||+||+ |||||||+|+||+||||+..+++||++||+||+|||.|+|+|.+|++++...+..++
T Consensus 300 RdSkLTrlLq--dsLgGnskT~mIa~iSP~~~~~~ETlsTLrfA~rak~I~n~p~~n~~~~~~~l~~~k 366 (388)
T 3bfn_A 300 RDSKLTRLLQ--DSLGGSAHSILIANIAPERRFYLDTVSALNFAARSKEVINRPFTNESLQPHALGPVK 366 (388)
T ss_dssp GGSHHHHHTT--TSSSTTCEEEEEEEECCSGGGHHHHHHHHHHHCSEEEEC------------------
T ss_pred cccHHHHHHH--HhhCCCccEEEEEEECCccccHHHHHHHHHHHHHHhhCcCcCcccCCCCHHHHHHHH
Confidence 4789999999 999999999999999999999999999999999999999999999988776554444
No 7
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=99.83 E-value=1.3e-21 Score=144.22 Aligned_cols=60 Identities=48% Similarity=0.678 Sum_probs=57.1
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhhhccceecCCchH
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNA 64 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I~~~~~~n~~~~~ 64 (91)
-+|+||+||+ |||||||+|+||+||||+..+++||++||+||+|||.|+|+|.+|+++..
T Consensus 288 RdSkLT~lLq--dsLgGnskt~mI~~isP~~~~~~ETl~TL~fA~rak~i~n~~~~n~~~~~ 347 (350)
T 2vvg_A 288 RDSKLTRLLQ--DSLGGNSKTLMCANISPASTNYDETMSTLRYADRAKQIKNKPRINEDPKD 347 (350)
T ss_dssp GGCHHHHHTT--TTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCBSCTT
T ss_pred cccHHHHHHH--HhcCCCccEEEEEEeCCccccHHHHHHHHHHHHHHhhccccceecCCchh
Confidence 4789999999 99999999999999999999999999999999999999999999998764
No 8
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=99.82 E-value=6.1e-21 Score=140.90 Aligned_cols=56 Identities=43% Similarity=0.548 Sum_probs=51.6
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhhhccceecC
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVVNE 60 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I~~~~~~n~ 60 (91)
-+|+||+||+ |||||||+|+||+||||+..+++||++||+||+|||.|+|+|.+|+
T Consensus 303 RdSkLT~lLq--dsLgGnskt~mIa~vsP~~~~~~ETl~TLrfA~rak~I~n~p~vn~ 358 (359)
T 1x88_A 303 RESKLTRILQ--DSLGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNKPEVNQ 358 (359)
T ss_dssp GGSHHHHHTG--GGSSSSSEEEEEEEECCCGGGHHHHHHHHHHHHHHTTCCCCCC---
T ss_pred ccchHHHHHH--HHhCCCCeEEEEEEECCCcccHHHHHHHHHHHHHHhhccCcceeCC
Confidence 4789999999 9999999999999999999999999999999999999999999986
No 9
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=99.81 E-value=9.9e-21 Score=139.62 Aligned_cols=61 Identities=34% Similarity=0.394 Sum_probs=57.2
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhhhccceecCCchHH
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNAR 65 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I~~~~~~n~~~~~~ 65 (91)
-+|+||+||+ |||||||+|+||+||||+..+++||++||+||+|||.|+|+|.+|.++...
T Consensus 283 RdSkLT~lLq--dsLgGns~t~mI~~isP~~~~~~ETl~TL~fA~rak~I~n~~~vn~~~~~~ 343 (355)
T 1goj_A 283 RDSKLTRILQ--ESLGGNSRTTLIINCSPSSYNDAETLSTLRFGMRAKSIKNKAKVNAELSPA 343 (355)
T ss_dssp GGCHHHHHTG--GGTTSSCEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCSSSSCS
T ss_pred ccCHHHHHHH--HHhCCCCcEEEEEEECcccccHHHHHHHHHHHHHHhhccCCceeCCCCCHH
Confidence 4789999999 999999999999999999999999999999999999999999999976543
No 10
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster}
Probab=99.80 E-value=7.1e-21 Score=141.15 Aligned_cols=58 Identities=43% Similarity=0.505 Sum_probs=55.4
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhhhccceecCCc
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVVNEDP 62 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I~~~~~~n~~~ 62 (91)
-+|+||+||+ |||||||+|+||+||||+..+++||++||+||+|||.|+|+|.+|++.
T Consensus 314 RdSkLT~lLq--dsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I~n~p~vN~~~ 371 (373)
T 2wbe_C 314 RESKLTRLLQ--ESLGGRTKTSIIATISPGHKDIEETLSTLEYAHRAKNIQNKPEVNQKL 371 (373)
T ss_dssp GGCHHHHHTH--HHHHSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCEECCCCCEEC
T ss_pred ccchHHHHHH--HHhCCCceEEEEEEeCCCcccHHHHHHHHHHHHHHhhccccceecccc
Confidence 4789999999 999999999999999999999999999999999999999999999864
No 11
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=99.79 E-value=4.7e-20 Score=139.29 Aligned_cols=59 Identities=47% Similarity=0.617 Sum_probs=51.3
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhhhccceecC-CchHH
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVVNE-DPNAR 65 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I~~~~~~n~-~~~~~ 65 (91)
-+|+||+||+ |||||||+|+||+||||+ +++||++||+||+|||.|+|+|.+|+ ++...
T Consensus 368 RdSkLTrLLq--dsLgGnskT~mIa~iSP~--~~~ETlsTLrfA~rak~I~n~~~vN~~d~~~~ 427 (443)
T 2owm_A 368 RDSVLTWLLK--DSLGGNSKTAMIACISPT--DYDETLSTLRYADQAKRIRTRAVVNQVDGVSA 427 (443)
T ss_dssp GGSHHHHHST--TTTTSSCEEEEEEEECSS--CHHHHHHHHHHHHHHTTCEECCCCCCC-----
T ss_pred cccHhHHHHH--HhhCCCCcEEEEEEeccc--cHHHHHHHHHHHHHHhhccccceecccCCccH
Confidence 3788999988 999999999999999997 59999999999999999999999999 55443
No 12
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}
Probab=99.79 E-value=3.4e-20 Score=136.51 Aligned_cols=59 Identities=27% Similarity=0.401 Sum_probs=53.2
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhhhccceecCCchHH
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNAR 65 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I~~~~~~n~~~~~~ 65 (91)
-+|+||+||+ |||||||+|+||+||+|+ +++||++||+||+|||.|+|.|.+|+++...
T Consensus 283 RdSkLT~lLq--dsLgGnskt~mI~~isP~--~~~ETlsTL~fA~rak~I~n~~~vn~~~~~~ 341 (349)
T 1t5c_A 283 RDSKLTRILQ--NSLGGNAKTRIICTITPV--SFDETLTALQFASTAKYMKNTPYVNEVSTDE 341 (349)
T ss_dssp GGSHHHHHTG--GGTTSSSEEEEEEEECTT--CSHHHHHHHHHHHHHTTCCCCCCCCEEC---
T ss_pred cccHHHHHHH--HhcCCCceEEEEEEeCCC--CHHHHHHHHHHHHHHhhcccCceeccCCCCC
Confidence 4789999999 999999999999999997 5899999999999999999999999977544
No 13
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*
Probab=99.79 E-value=4.1e-20 Score=136.73 Aligned_cols=56 Identities=55% Similarity=0.636 Sum_probs=44.5
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhhhccceecC
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVVNE 60 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I~~~~~~n~ 60 (91)
-+|+||+||+ |||||||+|+||+||||+..+++||++||+||+|||.|+|.|.++.
T Consensus 307 RdSkLT~lLq--dsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I~~~~~~~~ 362 (366)
T 2zfi_A 307 RDSVLTWLLR--ENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIRNTVSVNH 362 (366)
T ss_dssp GGSHHHHHTG--GGSSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHTC----------
T ss_pred cccHHHHHHH--HHhCCCceEEEEEEeCCCcccHHHHHHHHHHHHHHhhccCCCCCCC
Confidence 4789999999 9999999999999999999999999999999999999999998864
No 14
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9
Probab=99.78 E-value=6.4e-20 Score=135.56 Aligned_cols=56 Identities=30% Similarity=0.395 Sum_probs=45.6
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhhhccceecC
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVVNE 60 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I~~~~~~n~ 60 (91)
-+|+||+||+ |||||||+|+||+||||+..+++||++||+||+|||.|+|.|..+.
T Consensus 284 RdSkLT~lLq--dsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~i~n~~~~~~ 339 (360)
T 1ry6_A 284 RDSELTKVLR--DIFVGKSKSIMIANISPTISCCEQTLNTLRYSSRVKNKGNSKLEGK 339 (360)
T ss_dssp GGCHHHHHTG--GGGSSSCEEEEEEEECCBGGGHHHHHHHHHHHHHHCC---------
T ss_pred ccCHHHHHHH--HHhCCCCeEEEEEEeCCCcccHHHHHHHHHHHHHHhhcccCcccCC
Confidence 4789999999 9999999999999999999999999999999999999999776654
No 15
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0
Probab=99.74 E-value=1e-18 Score=128.89 Aligned_cols=48 Identities=38% Similarity=0.548 Sum_probs=44.4
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhh
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRI 52 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I 52 (91)
-+|+||+||+ |||||||+|+||+||||+..+++||++||+||+|||.|
T Consensus 308 RdSkLT~lL~--dsLgGnskt~mIa~isP~~~~~~ETl~TL~fA~rak~I 355 (355)
T 3lre_A 308 RNSKLTRLLK--DSLGGNCQTIMIAAVSPSSVFYDDTYNTLKYANRAKDI 355 (355)
T ss_dssp GGSHHHHHTT--TTSSTTSEEEEEEEECCBGGGHHHHHHHHHHHHHTC--
T ss_pred ccCHHHHHHH--HhcCCCceEEEEEEeCCchhhHHHHHHHHHHHHHhccC
Confidence 4789999999 99999999999999999999999999999999999986
No 16
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii}
Probab=99.73 E-value=1.4e-18 Score=127.85 Aligned_cols=52 Identities=23% Similarity=0.284 Sum_probs=45.5
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhhhccc
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHA 56 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I~~~~ 56 (91)
-||+||+||+ |||||||+|+||+||||+..+++||++||+||+|++.|+..+
T Consensus 297 RdSkLT~lLq--dsLgGnskt~mi~~vsP~~~~~~ETl~TL~fA~rv~~ik~~~ 348 (349)
T 3t0q_A 297 RNSKLTYLLQ--YSLVGDSKTLMFVNIPPDPNHISETLNSLRFASKVNSTKIAK 348 (349)
T ss_dssp GGSHHHHHHG--GGSSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHHC-----
T ss_pred cCCHHHHHHH--HhcCCCceEEEEEEeCCchhhHHHHHHHHHHHHHhhhcccCC
Confidence 4789999999 999999999999999999999999999999999999998754
No 17
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A*
Probab=99.73 E-value=7.8e-19 Score=129.14 Aligned_cols=53 Identities=26% Similarity=0.300 Sum_probs=49.1
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhhhccce
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAV 57 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I~~~~~ 57 (91)
-+|+||+||+ |||||||+|+||+||||+..+++||++||+||+||+.|+..+.
T Consensus 294 RdSkLT~lLq--dsLgGnskt~mI~~vsP~~~~~~ETl~TLrfA~r~~~i~~~~r 346 (347)
T 1f9v_A 294 RNSKLTYLLQ--YSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVNSTRLVSR 346 (347)
T ss_dssp GGSHHHHHHH--HHHSTTCEEEEEEEECCSGGGHHHHHHHHHHHHHHCCTTTC--
T ss_pred ccCHHHHHHH--HHhCCCccEEEEEEeCCccccHHHHHHHHHHHHHHhhhccCCC
Confidence 4789999999 9999999999999999999999999999999999999998764
No 18
>3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens}
Probab=99.73 E-value=7e-19 Score=129.96 Aligned_cols=48 Identities=29% Similarity=0.343 Sum_probs=46.0
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhh
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRI 52 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I 52 (91)
-||+||+||+ |||||||+|+||+||||+..+++||++||+||+|||.|
T Consensus 312 RdSkLT~lLq--dsLgGnskt~mI~~isP~~~~~~ETlsTL~fA~rak~I 359 (359)
T 3nwn_A 312 RQCKLTHALK--DSLGGNCNMVLVTNIYGEAAQLEETLSSLRFASRMKLV 359 (359)
T ss_dssp GGSHHHHHTH--HHHSSSSEEEEEEEECCSGGGHHHHHHHHHHHTTGGGC
T ss_pred ccCHHHHHHH--HhcCCCccEEEEEEeCCchhhHHHHHHHHHHHHHHcCC
Confidence 4789999999 99999999999999999999999999999999999987
No 19
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A*
Probab=99.73 E-value=1.4e-18 Score=126.85 Aligned_cols=48 Identities=31% Similarity=0.335 Sum_probs=46.0
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhh
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRI 52 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I 52 (91)
-+|+||+||+ |||||||+|+||+||||+..+++||++||+||+|||.|
T Consensus 278 RdSkLT~lLq--dsLgGns~t~mia~vsP~~~~~~ETl~TL~fa~rak~I 325 (325)
T 1bg2_A 278 RDSKMTRILQ--DSLGGNCRTTIVICCSPSSYNESETKSTLLFGQRAKTI 325 (325)
T ss_dssp GGSHHHHHGG--GTSSSSCEEEEEEEECCBGGGHHHHHHHHHHHHTSCCC
T ss_pred cccHHHHHHH--HHhCCCCcEEEEEEECCccccHHHHHHHHHHHHHhccC
Confidence 4789999999 99999999999999999999999999999999999986
No 20
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A*
Probab=99.72 E-value=2.9e-18 Score=126.01 Aligned_cols=53 Identities=26% Similarity=0.277 Sum_probs=48.9
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhhhccce
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAV 57 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I~~~~~ 57 (91)
-+|+||+||+ |||||||+|+||+||||+..+++||++||+||+||+.....|.
T Consensus 288 RdSkLT~lLq--dsLgGnskt~mIa~isP~~~~~~ETlsTL~fA~ra~~~~~~~~ 340 (344)
T 3dc4_A 288 RDSVLTTVLQ--ASLTAQSYLTFLACISPHQCDLSETLSTLRFGTSAKAAALEHH 340 (344)
T ss_dssp GGSHHHHHTT--TTSSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHHHHTTTC-
T ss_pred cccHHHHHHH--HHhCCCCEEEEEEEeCCchhhHHHHHHHHHHHHHHhhcCCCCC
Confidence 4789999999 9999999999999999999999999999999999999876653
No 21
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=99.72 E-value=2.1e-18 Score=128.97 Aligned_cols=53 Identities=26% Similarity=0.300 Sum_probs=46.6
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhhhccce
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAV 57 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I~~~~~ 57 (91)
-||+||+||+ |||||||+|+||+||||+..+++||++||+||+|++.++..|.
T Consensus 350 RdSkLT~LLq--dsLgGnskt~mi~~vsP~~~~~~ETl~TL~fA~rv~~~~~~~r 402 (403)
T 4etp_A 350 RNSKLTYLLQ--YSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVNSTRLVSR 402 (403)
T ss_dssp GGSHHHHHTG--GGTSTTCEEEEEEEECCSGGGHHHHHHHHHHHHHHCCC-----
T ss_pred ccchHHHHHH--HhcCCCceEEEEEEeCCchhhHHHHHHHHHHHHHHhhcccCCC
Confidence 4789999999 9999999999999999999999999999999999999998774
No 22
>2nr8_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural genomics consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} PDB: 3nwn_A*
Probab=99.71 E-value=1.8e-18 Score=127.66 Aligned_cols=48 Identities=29% Similarity=0.343 Sum_probs=46.1
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhh
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRI 52 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I 52 (91)
-||+||+||+ |||||||+|+||+||+|+..+++||++||+||+|||.|
T Consensus 311 RdSkLT~LLq--dsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~Rak~I 358 (358)
T 2nr8_A 311 RQCKLTHALK--DSLGGNCNMVLVTNIYGEAAQLEETLSSLRFASRMKLV 358 (358)
T ss_dssp GGSHHHHHTH--HHHSSSSEEEEEEEECCSGGGHHHHHHHHHHHTTGGGC
T ss_pred ccCHHHHHHH--HhcCCCCeEEEEEEeCCchhhHHHHHHHHHHHHHhccC
Confidence 4789999999 99999999999999999999999999999999999986
No 23
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D*
Probab=99.71 E-value=3.6e-18 Score=127.26 Aligned_cols=51 Identities=39% Similarity=0.543 Sum_probs=45.2
Q ss_pred hhhhhhhhhccCCC-CCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhhhcc
Q psy17366 3 GKHWILGLLRYWEN-PTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRIVNH 55 (91)
Q Consensus 3 ~~~~ltkllr~qds-LgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I~~~ 55 (91)
-+|+||+||+ || |||||+|+||+||||+..+++||++||+||+|||.|++.
T Consensus 334 RdSKLTrlLq--dsllGgnskT~mIa~isP~~~~~~ETlsTLrfA~rak~I~~~ 385 (387)
T 2heh_A 334 RESKLTQVLR--DSFIGENSRTCMIATISPGISSCEYTLNTLRYADRVKELSPH 385 (387)
T ss_dssp GGSHHHHHTG--GGGSSTTEEEEEEEEECCBGGGHHHHHHHHHHHHHHCC----
T ss_pred cccHHHHHHh--hhccCCCCeEEEEEEeCCccchHHHHHHHHHHHHHhccCcCC
Confidence 4789999999 99 699999999999999999999999999999999999875
No 24
>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens}
Probab=99.71 E-value=2.1e-18 Score=126.15 Aligned_cols=49 Identities=33% Similarity=0.440 Sum_probs=44.6
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhhh
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRIV 53 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I~ 53 (91)
-+|+||+||+ |||||||+|+||+||||+..+++||++||+||+|||.|+
T Consensus 281 RdSkLT~lL~--dsLgGns~t~mI~~isP~~~~~~ETl~TL~fA~rak~i~ 329 (330)
T 2h58_A 281 RNSKLTYLLQ--DSLSGDSKTLMVVQVSPVEKNTSETLYSLKFAERVRSVE 329 (330)
T ss_dssp GGSHHHHHTH--HHHSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHC---
T ss_pred cccHHHHHHH--HHhCCCceEEEEEEeCCccccHHHHHHHHHHHHHHhhCc
Confidence 4789999999 999999999999999999999999999999999999986
No 25
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=99.70 E-value=7.5e-18 Score=126.31 Aligned_cols=53 Identities=25% Similarity=0.279 Sum_probs=47.9
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhhhccce
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAV 57 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I~~~~~ 57 (91)
-+|+||+||+ |||||||+|+||+||||+..+++||++||+||+|++.|+..+.
T Consensus 335 RdSkLT~LLq--dsLgGnskt~mI~~vsP~~~~~~ETl~TLrfA~rv~~i~~~~~ 387 (412)
T 3u06_A 335 RNSKLTHLLM--PSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCKMTKA 387 (412)
T ss_dssp GGSHHHHHHG--GGTSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHHHHCC---
T ss_pred cccHHHHHHH--HhcCCCceEEEEEEeCCChhhHHHHHHHHHHHHHHhhcccccc
Confidence 4789999999 9999999999999999999999999999999999999985443
No 26
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A*
Probab=99.70 E-value=7.6e-18 Score=123.65 Aligned_cols=46 Identities=41% Similarity=0.590 Sum_probs=44.0
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhh
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAK 50 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak 50 (91)
-+|+||+||+ |||||||+|+||+||||+..+++||++||+||+|||
T Consensus 299 RdSkLT~lLq--dsLgGnskt~mI~~vsP~~~~~~ETl~TL~fA~rAk 344 (344)
T 4a14_A 299 RDSKITRILK--DSLGGNAKTVMIACVSPSSSDFDETLNTLNYASRAQ 344 (344)
T ss_dssp GGCHHHHHTT--TSSSTTSEEEEEEEECCBGGGHHHHHHHHHHHHHTC
T ss_pred chhhHHHHhH--hhcCCCcceEEEEEeCCCccchhHHhhhhhhhhhcC
Confidence 4789999999 999999999999999999999999999999999997
No 27
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}
Probab=99.69 E-value=9.8e-18 Score=124.47 Aligned_cols=48 Identities=25% Similarity=0.376 Sum_probs=44.4
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhh
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRI 52 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I 52 (91)
-+|+||+||+ |||||||+|+||+||||+..+++||++||+||+|++++
T Consensus 329 RdSkLT~LLq--dsLgGnskT~mIa~isP~~~~~~ETlsTLrfA~Rv~~~ 376 (376)
T 2rep_A 329 RNSKLTYLLQ--NSLGGSAKMLMFVNISPLEENVSESLNSLRFASKVNQC 376 (376)
T ss_dssp GGSHHHHHTG--GGTSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHC--
T ss_pred cCCHHHHHHH--HhhCCCCeEEEEEEeCCchhhHHHHHHHHHHHHHHhcC
Confidence 4789999999 99999999999999999999999999999999999863
No 28
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A*
Probab=99.69 E-value=4.5e-18 Score=127.51 Aligned_cols=53 Identities=36% Similarity=0.498 Sum_probs=46.8
Q ss_pred hhhhhhhhhccCCC-CCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhhhccce
Q psy17366 3 GKHWILGLLRYWEN-PTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAV 57 (91)
Q Consensus 3 ~~~~ltkllr~qds-LgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I~~~~~ 57 (91)
-+|+||+||+ || |||||+|+||+||||+..+++||++||+||+|||.|...|.
T Consensus 354 RdSKLTrLLq--dsllGgnskT~mIa~iSP~~~~~~ETlsTLrfA~rak~i~~~~~ 407 (410)
T 1v8k_A 354 RESKLTQVLR--DSFIGENSRTCMIAMISPGISSCEYTLNTLRYADRVKELSHHHH 407 (410)
T ss_dssp CCCHHHHHTT--HHHHSSSEEEEEEEEECCBGGGHHHHHHHHHHHHHHHTTC----
T ss_pred ccchhHHHHh--hcccCCCceEEEEEEeCCccccHHHHHHHHHHHHHhccCCCCCC
Confidence 3789999999 99 69999999999999999999999999999999999987764
No 29
>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}
Probab=99.69 E-value=1e-17 Score=131.62 Aligned_cols=49 Identities=24% Similarity=0.360 Sum_probs=45.4
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhhhh
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKRIV 53 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~I~ 53 (91)
-+|+||+||+ |||||||+|+||+||||+..+++||++||+||+|||+|+
T Consensus 664 R~SkLT~lL~--~slggn~~t~~i~~isp~~~~~~et~~tL~fa~r~~~i~ 712 (715)
T 4h1g_A 664 RNSKLTYLLK--HSLGGNSKTLMFVNISPLTKDLNETINSLRFATKVNNTR 712 (715)
T ss_dssp GGCHHHHHTG--GGTSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHCC--
T ss_pred ccCHHHHHHH--hhcCCCceEEEEEEECCChhhHHHHHHHHHHHHHhccce
Confidence 4789999999 999999999999999999999999999999999999997
No 30
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9
Probab=99.68 E-value=7.7e-18 Score=124.11 Aligned_cols=47 Identities=62% Similarity=0.731 Sum_probs=44.4
Q ss_pred hhhhhhhhhccCCCCCCCcceeEEEeeCCCCCCHHHHHhHHHHHhHhhh
Q psy17366 3 GKHWILGLLRYWENPTMLHKTVMVATVSPAADNYEETLSTLRYADRAKR 51 (91)
Q Consensus 3 ~~~~ltkllr~qdsLgGns~t~~I~~vsp~~~~~~ETlsTL~fa~rak~ 51 (91)
-+|+||+||+ |||||||+|+||+||||+..+++||++||+||.||+.
T Consensus 303 RdSkLT~lLq--dsLgGnskt~mIa~vsP~~~~~~ETlsTLr~a~~~~~ 349 (354)
T 3gbj_A 303 RDSVLTWLLK--DSLGGNSKTAMVATVSPAADNYDETLSTLRYADRAKH 349 (354)
T ss_dssp GGSHHHHHTH--HHHSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHC-
T ss_pred cccHHHHHHH--HHhCCCCeEEEEEEeCCCcchHHHHHHHHHHHHHhhh
Confidence 4789999999 9999999999999999999999999999999999985
No 31
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=60.27 E-value=3 Score=24.98 Aligned_cols=24 Identities=17% Similarity=0.217 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCc
Q psy17366 65 RIIRELRQEVDKLKEMLISAGVPV 88 (91)
Q Consensus 65 ~~i~~l~~ei~~L~~~L~~~~~~~ 88 (91)
+.-..+++||.+|+.+|...+..+
T Consensus 68 kmKq~YEeEI~rLr~eLe~r~~q~ 91 (92)
T 3vp9_A 68 KMKDAYEEEIKHLKLGLEQRDHQI 91 (92)
T ss_dssp HHHHHHHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCC
Confidence 445568999999999999887654
No 32
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=53.77 E-value=17 Score=17.12 Aligned_cols=18 Identities=28% Similarity=0.359 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy17366 66 IIRELRQEVDKLKEMLIS 83 (91)
Q Consensus 66 ~i~~l~~ei~~L~~~L~~ 83 (91)
.|..|+.||+.|+.++..
T Consensus 10 eiaalkkeiaalkfeiaa 27 (33)
T 4dzn_A 10 EIAALKKEIAALKFEIAA 27 (33)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 355566666666666553
No 33
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=52.62 E-value=19 Score=18.64 Aligned_cols=21 Identities=29% Similarity=0.631 Sum_probs=15.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHh
Q psy17366 63 NARIIRELRQEVDKLKEMLIS 83 (91)
Q Consensus 63 ~~~~i~~l~~ei~~L~~~L~~ 83 (91)
+.+.+.+++.|+++.+.++-+
T Consensus 13 KqEIL~E~RkElqK~K~EIIe 33 (45)
T 1use_A 13 KQELLEEVKKELQKVKEEIIE 33 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 346678888888888877654
No 34
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=46.69 E-value=21 Score=21.50 Aligned_cols=24 Identities=17% Similarity=0.223 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCC
Q psy17366 64 ARIIRELRQEVDKLKEMLISAGVP 87 (91)
Q Consensus 64 ~~~i~~l~~ei~~L~~~L~~~~~~ 87 (91)
...+..|++|+++|+..+...+..
T Consensus 74 ~~~~e~Lq~E~erLr~~v~~lEeg 97 (100)
T 1go4_E 74 REDHSQLQAECERLRGLLRAMERG 97 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc
Confidence 356889999999999999888764
No 35
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=45.70 E-value=35 Score=19.33 Aligned_cols=25 Identities=8% Similarity=0.005 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCc
Q psy17366 64 ARIIRELRQEVDKLKEMLISAGVPV 88 (91)
Q Consensus 64 ~~~i~~l~~ei~~L~~~L~~~~~~~ 88 (91)
...+.+..++|..|+.+|.+..+.+
T Consensus 46 Ek~L~ekd~eI~~LqseLDKfrSVl 70 (72)
T 3nmd_A 46 ELELDQKDELIQMLQNELDKYRSVI 70 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccC
Confidence 3457778888888888888776543
No 36
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=44.95 E-value=23 Score=18.26 Aligned_cols=20 Identities=35% Similarity=0.617 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q psy17366 64 ARIIRELRQEVDKLKEMLIS 83 (91)
Q Consensus 64 ~~~i~~l~~ei~~L~~~L~~ 83 (91)
.+.|..|+.||++|+.+.+.
T Consensus 30 ekiianlrdeiarlenevas 49 (52)
T 3he5_B 30 EKIIANLRDEIARLENEVAS 49 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 35678888999998888654
No 37
>2er8_A Regulatory protein Leu3; Zn(2)Cys(6) binuclear cluster motif, transcription activator/DNA complex; 2.85A {Saccharomyces cerevisiae} PDB: 2ere_A 2erg_A
Probab=43.57 E-value=30 Score=18.46 Aligned_cols=24 Identities=8% Similarity=0.094 Sum_probs=18.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCC
Q psy17366 63 NARIIRELRQEVDKLKEMLISAGV 86 (91)
Q Consensus 63 ~~~~i~~l~~ei~~L~~~L~~~~~ 86 (91)
....+..|+++|+.|+..|.....
T Consensus 47 ~~~~~~~Le~ri~~Le~~l~~l~~ 70 (72)
T 2er8_A 47 KRARNEAIEKRFKELTRTLTNLTS 70 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC--
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhc
Confidence 346688999999999999987653
No 38
>3ra3_B P2F; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=43.53 E-value=24 Score=15.98 Aligned_cols=17 Identities=24% Similarity=0.347 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHhc
Q psy17366 68 RELRQEVDKLKEMLISA 84 (91)
Q Consensus 68 ~~l~~ei~~L~~~L~~~ 84 (91)
..|+.||+.|+.+++..
T Consensus 10 arlkqeiaaleyeiaal 26 (28)
T 3ra3_B 10 ARLKQEIAALEYEIAAL 26 (28)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHh
Confidence 35677777777776654
No 39
>2lw9_A Unconventionnal myosin-X; MYO10 anti-CC, motor protein; NMR {Homo sapiens}
Probab=40.77 E-value=36 Score=17.93 Aligned_cols=21 Identities=24% Similarity=0.352 Sum_probs=16.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHh
Q psy17366 63 NARIIRELRQEVDKLKEMLIS 83 (91)
Q Consensus 63 ~~~~i~~l~~ei~~L~~~L~~ 83 (91)
..+.|..|..||+.|+.+-..
T Consensus 4 Q~EEILRLErEIE~Lqrqke~ 24 (51)
T 2lw9_A 4 QVEEILRLEKEIEDLQRMKEQ 24 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 456788999999999887554
No 40
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=40.06 E-value=33 Score=17.47 Aligned_cols=19 Identities=21% Similarity=0.396 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy17366 64 ARIIRELRQEVDKLKEMLI 82 (91)
Q Consensus 64 ~~~i~~l~~ei~~L~~~L~ 82 (91)
.+.|..|+.||+.|+..+.
T Consensus 30 kdliaylekeianlrkkie 48 (49)
T 3he5_A 30 KDLIAYLEKEIANLRKKIE 48 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 4568888889988887764
No 41
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=39.20 E-value=28 Score=15.62 Aligned_cols=17 Identities=24% Similarity=0.464 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy17366 66 IIRELRQEVDKLKEMLI 82 (91)
Q Consensus 66 ~i~~l~~ei~~L~~~L~ 82 (91)
.+..|++.+.+|+..|.
T Consensus 9 eledlqerlrklrkklr 25 (27)
T 3twe_A 9 ELEDLQERLRKLRKKLR 25 (27)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 45566666666666654
No 42
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=37.91 E-value=40 Score=17.86 Aligned_cols=23 Identities=4% Similarity=-0.044 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCC
Q psy17366 65 RIIRELRQEVDKLKEMLISAGVP 87 (91)
Q Consensus 65 ~~i~~l~~ei~~L~~~L~~~~~~ 87 (91)
..+..|.+++..|+.++...+..
T Consensus 34 ~~~~~l~~e~~~L~~~~~~l~~~ 56 (57)
T 2wuj_A 34 KDYEIVLRKKTELEAKVNELDER 56 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Confidence 44777888888888888776543
No 43
>2a3d_A Protein (de novo three-helix bundle); NMR {Synthetic construct} SCOP: k.9.1.1
Probab=36.08 E-value=51 Score=18.04 Aligned_cols=43 Identities=12% Similarity=0.127 Sum_probs=28.4
Q ss_pred HHHhHhhhhhccceecCCchHHHHHHHHHHHHHHHHHHHhcCCC
Q psy17366 44 RYADRAKRIVNHAVVNEDPNARIIRELRQEVDKLKEMLISAGVP 87 (91)
Q Consensus 44 ~fa~rak~I~~~~~~n~~~~~~~i~~l~~ei~~L~~~L~~~~~~ 87 (91)
.|-+|.-.|+...+....+.. .+..++.||+..+.+|+.....
T Consensus 6 efkqrlaaiktrlqalggsea-elaafekeiaafeselqaykgk 48 (73)
T 2a3d_A 6 EFKQRLAAIKTRLQALGGSEA-ELAAFEKEIAAFESELQAYKGK 48 (73)
T ss_dssp HHHHHHHHHHHHHHHCSSGGG-THHHHHHHHHHHHHHHHHSSSC
T ss_pred HHHHHHHHHHHHHHHhcCcHH-HHHHHHHHHHHHHHHHHHhccC
Confidence 466777777776665554443 3566778888888888776543
No 44
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=35.79 E-value=37 Score=16.23 Aligned_cols=19 Identities=37% Similarity=0.525 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHhcCCCccc
Q psy17366 72 QEVDKLKEMLISAGVPVSW 90 (91)
Q Consensus 72 ~ei~~L~~~L~~~~~~~~~ 90 (91)
+|+.+|+++-.+..+++.|
T Consensus 15 eelkklkeeakkanirvtf 33 (36)
T 2ki0_A 15 EELKKLKEEAKKANIRVTF 33 (36)
T ss_dssp HHHHHHHHHHHHHCCCCCB
T ss_pred HHHHHHHHHHHhccEEEEe
Confidence 4666777777777776654
No 45
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=34.99 E-value=47 Score=20.47 Aligned_cols=25 Identities=32% Similarity=0.482 Sum_probs=16.6
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHh
Q psy17366 59 NEDPNARIIRELRQEVDKLKEMLIS 83 (91)
Q Consensus 59 n~~~~~~~i~~l~~ei~~L~~~L~~ 83 (91)
..++...+|..|+.++..|+.++..
T Consensus 9 ~~d~rD~~Ie~Lkreie~lk~ele~ 33 (120)
T 3i00_A 9 NKDEKDHLIERLYREISGLKAQLEN 33 (120)
T ss_dssp -CCTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 3355566777777777777777654
No 46
>1a93_B MAX protein, coiled coil, LZ; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Mus musculus} SCOP: h.1.3.1 PDB: 2a93_B
Probab=30.17 E-value=53 Score=15.92 Aligned_cols=20 Identities=15% Similarity=0.245 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q psy17366 65 RIIRELRQEVDKLKEMLISA 84 (91)
Q Consensus 65 ~~i~~l~~ei~~L~~~L~~~ 84 (91)
.-|.+++.+...|+.++...
T Consensus 14 qDIddlkrQN~~Le~Qir~l 33 (34)
T 1a93_B 14 QDIDDLKRQNALLEQQVRAL 33 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHHHHhc
Confidence 34777888888887777543
No 47
>1pyi_A Protein (pyrimidine pathway regulator 1); protein-DNA complex, transcription/DNA complex, GAL4, zinc finger, Zn2Cys6, binuclear cluster; HET: DNA; 3.20A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1
Probab=29.28 E-value=69 Score=17.90 Aligned_cols=25 Identities=16% Similarity=0.146 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCc
Q psy17366 64 ARIIRELRQEVDKLKEMLISAGVPV 88 (91)
Q Consensus 64 ~~~i~~l~~ei~~L~~~L~~~~~~~ 88 (91)
...+..|++++..|+..|.+.+...
T Consensus 47 ~~~~~~Le~rl~~le~~l~~~~~~~ 71 (96)
T 1pyi_A 47 RSYVFFLEDRLAVMMRVLKEYGVDP 71 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 4468889999999999999877643
No 48
>1zme_C Proline utilization transcription activator; complex (transcription regulation/DNA), PUT3, Zn2Cys6, binuclear cluster; HET: DNA 5IU; 2.50A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1 PDB: 1ajy_A
Probab=28.61 E-value=21 Score=18.98 Aligned_cols=21 Identities=10% Similarity=0.216 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcC
Q psy17366 65 RIIRELRQEVDKLKEMLISAG 85 (91)
Q Consensus 65 ~~i~~l~~ei~~L~~~L~~~~ 85 (91)
..+..|++++..|+.+|....
T Consensus 44 ~~~~~L~~ri~~Le~~l~~l~ 64 (70)
T 1zme_C 44 KYLQQLQKDLNDKTEENNRLK 64 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 346667777777777666543
No 49
>2wg5_A General control protein GCN4, proteasome-activating nucleotidase; transcription hydrolase complex, nucleotide-binding; 2.10A {Saccharomyces cerevisiae} PDB: 2wg6_A
Probab=28.55 E-value=39 Score=20.21 Aligned_cols=24 Identities=17% Similarity=0.155 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCc
Q psy17366 65 RIIRELRQEVDKLKEMLISAGVPV 88 (91)
Q Consensus 65 ~~i~~l~~ei~~L~~~L~~~~~~~ 88 (91)
.....+++++..++.++......-
T Consensus 14 ~~~~~l~~~i~~lkeel~~L~~~P 37 (109)
T 2wg5_A 14 DKVEELLSKNYHLENEVARLRSPP 37 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC
Confidence 356677888888888877655443
No 50
>2ynq_A ESSB; membrane protein, secretion, type V, secretion system; 2.40A {Geobacillus thermodenitrificans}
Probab=27.36 E-value=40 Score=22.01 Aligned_cols=38 Identities=13% Similarity=0.212 Sum_probs=29.3
Q ss_pred HhhhhhccceecCCchHHHHHHHHHHHHHHHHHHHhcC
Q psy17366 48 RAKRIVNHAVVNEDPNARIIRELRQEVDKLKEMLISAG 85 (91)
Q Consensus 48 rak~I~~~~~~n~~~~~~~i~~l~~ei~~L~~~L~~~~ 85 (91)
.--.|++.+....+...+.+..++.+|..+..++.+.+
T Consensus 112 ~~~~vk~d~~Lsg~er~ekL~~~~~ei~e~~k~~~e~~ 149 (161)
T 2ynq_A 112 YREQIKGDTDLSGDEKQKKLDEIDQEIKEYERERKESE 149 (161)
T ss_dssp HHHHHHTCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455777777777778889999999999998877643
No 51
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=27.14 E-value=1.3e+02 Score=19.59 Aligned_cols=24 Identities=21% Similarity=0.376 Sum_probs=18.7
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHh
Q psy17366 60 EDPNARIIRELRQEVDKLKEMLIS 83 (91)
Q Consensus 60 ~~~~~~~i~~l~~ei~~L~~~L~~ 83 (91)
..++.+.|+.+.+|+..|+.++..
T Consensus 108 ~~~DeakI~aL~~Ei~~Lr~qL~~ 131 (175)
T 3lay_A 108 SSPDTAKINAVAKEMESLGQKLDE 131 (175)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 466777888888888888887764
No 52
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=26.03 E-value=40 Score=16.54 Aligned_cols=18 Identities=22% Similarity=0.329 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHhc
Q psy17366 67 IRELRQEVDKLKEMLISA 84 (91)
Q Consensus 67 i~~l~~ei~~L~~~L~~~ 84 (91)
-..|++|+.+|+..+.+.
T Consensus 17 ~~~Le~EV~RL~~ll~~~ 34 (36)
T 1kd8_A 17 VWHLENEVARLEKENAEC 34 (36)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhccc
Confidence 346788888888887654
No 53
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=25.63 E-value=19 Score=19.13 Aligned_cols=20 Identities=20% Similarity=0.307 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHhcC
Q psy17366 66 IIRELRQEVDKLKEMLISAG 85 (91)
Q Consensus 66 ~i~~l~~ei~~L~~~L~~~~ 85 (91)
++..|+.|...|+++|....
T Consensus 11 QVe~Lk~ENshLrrEL~dNS 30 (54)
T 1deb_A 11 QVEALKMENSNLRQELEDNS 30 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHhhH
Confidence 45556666666666665543
No 54
>1got_G GT-gamma; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: a.137.3.1 PDB: 1tbg_E 2trc_G 1b9y_B 1b9x_B 1a0r_G*
Probab=25.58 E-value=40 Score=19.00 Aligned_cols=24 Identities=33% Similarity=0.340 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcc
Q psy17366 66 IIRELRQEVDKLKEMLISAGVPVS 89 (91)
Q Consensus 66 ~i~~l~~ei~~L~~~L~~~~~~~~ 89 (91)
.+..++.+++.|+.++.-.-..||
T Consensus 18 ~~~~lr~~veqLr~el~~~RikVS 41 (73)
T 1got_G 18 EKDKLKMEVDQLKKEVTLERMLVS 41 (73)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCHH
T ss_pred cHHHHHHHHHHHHHHHCCchhhHH
Confidence 477899999999999876655544
No 55
>3ni0_A Bone marrow stromal antigen 2; coiled-coil, antiviral defense, immune system, GPI anchor; 1.60A {Mus musculus}
Probab=24.69 E-value=71 Score=19.11 Aligned_cols=20 Identities=40% Similarity=0.469 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q psy17366 65 RIIRELRQEVDKLKEMLISA 84 (91)
Q Consensus 65 ~~i~~l~~ei~~L~~~L~~~ 84 (91)
+.+.+|+.||..|..+|.+.
T Consensus 67 ~~v~elqgEI~~Lnq~Lqda 86 (99)
T 3ni0_A 67 ARIKELENEVTKLNQELENL 86 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34888999999998888764
No 56
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=24.15 E-value=94 Score=17.62 Aligned_cols=21 Identities=14% Similarity=0.452 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcC
Q psy17366 65 RIIRELRQEVDKLKEMLISAG 85 (91)
Q Consensus 65 ~~i~~l~~ei~~L~~~L~~~~ 85 (91)
..|..|..+++.|..+|..++
T Consensus 29 ~~Ie~LE~~i~~le~~ladp~ 49 (89)
T 2lw1_A 29 QLLEDLEAKLEALQTQVADAS 49 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHHHHhCcc
Confidence 457778888888888887765
No 57
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=23.91 E-value=72 Score=19.80 Aligned_cols=21 Identities=29% Similarity=0.431 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcC
Q psy17366 65 RIIRELRQEVDKLKEMLISAG 85 (91)
Q Consensus 65 ~~i~~l~~ei~~L~~~L~~~~ 85 (91)
+.+.+|+.||..|..+|.+..
T Consensus 71 ~~vqeLqgEI~~Lnq~Lq~a~ 91 (121)
T 3mq7_A 71 KKVEELEGEITTLNHKLQDAS 91 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 347778888888877776543
No 58
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=23.70 E-value=88 Score=16.33 Aligned_cols=16 Identities=31% Similarity=0.341 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHHHHH
Q psy17366 67 IRELRQEVDKLKEMLI 82 (91)
Q Consensus 67 i~~l~~ei~~L~~~L~ 82 (91)
+..|.++++.|+.+|.
T Consensus 35 ~~~L~~~~~el~~~l~ 50 (53)
T 2yy0_A 35 YEAIVEENKKLKAKLA 50 (53)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHh
Confidence 4444555555555544
No 59
>2kgn_A Protein STE5; MAPKKK, STE11 SAM, STE50 SAM, cytoplasm, pheromone response, phosphoprotein, signaling protein; NMR {Synthetic} PDB: 2l4u_A
Probab=22.84 E-value=17 Score=16.24 Aligned_cols=14 Identities=36% Similarity=0.745 Sum_probs=9.1
Q ss_pred hhhhhhhhhccCCC
Q psy17366 3 GKHWILGLLRYWEN 16 (91)
Q Consensus 3 ~~~~ltkllr~qds 16 (91)
|.-|--||-|||.|
T Consensus 5 gkkwteklarfqrs 18 (26)
T 2kgn_A 5 GKKWTEKLARFQRS 18 (26)
T ss_dssp HGGGTTTHHHHGGG
T ss_pred hhHHHHHHHHHHHh
Confidence 45667777777654
No 60
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=22.47 E-value=95 Score=16.23 Aligned_cols=20 Identities=25% Similarity=0.320 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q psy17366 65 RIIRELRQEVDKLKEMLISA 84 (91)
Q Consensus 65 ~~i~~l~~ei~~L~~~L~~~ 84 (91)
+.++.-+.+|..|+.+++..
T Consensus 30 ~~L~~AR~el~~Lkeele~L 49 (51)
T 3m91_A 30 ETLKEARQQLLALREEVDRL 49 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 34677788888888888754
No 61
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=20.64 E-value=84 Score=15.34 Aligned_cols=17 Identities=24% Similarity=0.337 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHhc
Q psy17366 68 RELRQEVDKLKEMLISA 84 (91)
Q Consensus 68 ~~l~~ei~~L~~~L~~~ 84 (91)
..|++|+.+|+..+.+.
T Consensus 18 ~~Le~eV~RLk~ll~~~ 34 (36)
T 1kd8_B 18 WHLKNKVARLKKKNAEC 34 (36)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccc
Confidence 45778888888777543
Done!