RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy17374
         (71 letters)



>d1qk1a1 a.83.1.1 (A:1-102) Creatine kinase, N-domain {Human (Homo
          sapiens), mitochondria [TaxId: 9606]}
          Length = 102

 Score = 25.5 bits (56), Expect = 0.45
 Identities = 10/40 (25%), Positives = 14/40 (35%), Gaps = 2/40 (5%)

Query: 2  CPNDYTPDDWQSIWSGSGNPLLYIRSVVSRAVMVHKCYQV 41
           P  +T D    I +G  NP       V       + Y+V
Sbjct: 42 TPTGWTLDQ--CIQTGVDNPGHPFIKTVGMVAGDEETYEV 79


>d1osya_ b.1.21.1 (A:) Fungal immunomodulatory protein, FIP
          {Golden needle mushroom (Flammulina velutipes) [TaxId:
          38945]}
          Length = 114

 Score = 23.8 bits (51), Expect = 1.8
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 6/35 (17%)

Query: 5  DYTPDDWQSIWSGSGNPLLYIRSVVSRAVMVHKCY 39
          DYTP+     W G G P  YI ++    V+  K Y
Sbjct: 19 DYTPN-----W-GRGTPSSYIDNLTFPKVLTDKKY 47


>d1qh4a1 a.83.1.1 (A:2-102) Creatine kinase, N-domain {Chicken
          (Gallus gallus), brain-type [TaxId: 9031]}
          Length = 101

 Score = 23.2 bits (50), Expect = 2.8
 Identities = 10/40 (25%), Positives = 15/40 (37%), Gaps = 2/40 (5%)

Query: 2  CPNDYTPDDWQSIWSGSGNPLLYIRSVVSRAVMVHKCYQV 41
            + +T DD   I +G  NP       V       + Y+V
Sbjct: 46 TSSGFTLDD--VIQTGVDNPGHPFIMTVGCVAGDEESYEV 83


>d1pfoa_ f.9.1.1 (A:) Perfringolysin {Clostridium perfringens
           [TaxId: 1502]}
          Length = 471

 Score = 22.9 bits (49), Expect = 4.3
 Identities = 5/22 (22%), Positives = 10/22 (45%)

Query: 7   TPDDWQSIWSGSGNPLLYIRSV 28
           T +D +     +  P L + +V
Sbjct: 221 TFNDLKQKGVSNEAPPLMVSNV 242


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.322    0.134    0.456 

Gapped
Lambda     K      H
   0.267   0.0645    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 286,294
Number of extensions: 9866
Number of successful extensions: 42
Number of sequences better than 10.0: 1
Number of HSP's gapped: 42
Number of HSP's successfully gapped: 6
Length of query: 71
Length of database: 2,407,596
Length adjustment: 39
Effective length of query: 32
Effective length of database: 1,872,126
Effective search space: 59908032
Effective search space used: 59908032
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 47 (22.1 bits)