BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17386
(276 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With
Bound Mgadp-Befx
Length = 770
Score = 196 bits (498), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 130/189 (68%), Gaps = 7/189 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G LVAVNP+K + IYTQ V + G + PH+FA+++ AY S+ + NQS +
Sbjct: 117 TYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLL 176
Query: 61 ISGESGAGKTETTKFILQYLCSVT----SNVSTWVEQQILEANTILEAFGNAKTVRNDNS 116
I+GESGAGKTE TK ++QYL SV +N S +EQQIL+AN ILEAFGNAKT RN+NS
Sbjct: 177 ITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNS 236
Query: 117 SRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINK 176
SRFGKF+++ F+ I G IQ YLLE+SR+ FQS ERNYH+FYQL+ A ++ K
Sbjct: 237 SRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGA---TAEEK 293
Query: 177 EIMHYTSEE 185
+ +H E
Sbjct: 294 KALHLAGPE 302
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 48/67 (71%), Gaps = 5/67 (7%)
Query: 192 VFAWLVNHINT--CTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHY 249
+F WLV IN C + F+GVLDI GFE F VNSFEQLCINYTNEKL +FFNH+
Sbjct: 429 LFLWLVKKINNVLCE---ERKAYFIGVLDIEGFEIFKVNSFEQLCINYTNEKLQQFFNHH 485
Query: 250 VFALEQE 256
+F LEQE
Sbjct: 486 MFKLEQE 492
>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e
Bound With Mgadp-Alf4
Length = 770
Score = 196 bits (497), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 130/189 (68%), Gaps = 7/189 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G LVAVNP+K + IYTQ V + G + PH+FA+++ AY S+ + NQS +
Sbjct: 117 TYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLL 176
Query: 61 ISGESGAGKTETTKFILQYLCSVT----SNVSTWVEQQILEANTILEAFGNAKTVRNDNS 116
I+GESGAGKTE TK ++QYL SV +N S +EQQIL+AN ILEAFGNAKT RN+NS
Sbjct: 177 ITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNS 236
Query: 117 SRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINK 176
SRFGKF+++ F+ I G IQ YLLE+SR+ FQS ERNYH+FYQL+ A ++ K
Sbjct: 237 SRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGA---TAEEK 293
Query: 177 EIMHYTSEE 185
+ +H E
Sbjct: 294 KALHLAGPE 302
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 48/67 (71%), Gaps = 5/67 (7%)
Query: 192 VFAWLVNHINT--CTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHY 249
+F WLV IN C + F+GVLDI GFE F VNSFEQLCINYTNEKL +FFNH+
Sbjct: 429 LFLWLVKKINNVLCQ---ERKAYFIGVLDIEGFEIFKVNSFEQLCINYTNEKLQQFFNHH 485
Query: 250 VFALEQE 256
+F LEQE
Sbjct: 486 MFKLEQE 492
>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentabromopseudilin
pdb|2JJ9|A Chain A, Crystal Structure Of Myosin-2 In Complex With Adp-
Metavanadate
pdb|3MJX|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Blebbistatin
Length = 788
Score = 196 bits (497), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 130/189 (68%), Gaps = 7/189 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G LVAVNP+K + IYTQ V + G + PH+FA+++ AY S+ + NQS +
Sbjct: 128 TYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLL 187
Query: 61 ISGESGAGKTETTKFILQYLCSVT----SNVSTWVEQQILEANTILEAFGNAKTVRNDNS 116
I+GESGAGKTE TK ++QYL SV +N S +EQQIL+AN ILEAFGNAKT RN+NS
Sbjct: 188 ITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNS 247
Query: 117 SRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINK 176
SRFGKF+++ F+ I G IQ YLLE+SR+ FQS ERNYH+FYQL+ A ++ K
Sbjct: 248 SRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGA---TAEEK 304
Query: 177 EIMHYTSEE 185
+ +H E
Sbjct: 305 KALHLAGPE 313
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 48/67 (71%), Gaps = 5/67 (7%)
Query: 192 VFAWLVNHINT--CTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHY 249
+F WLV IN C + F+GVLDI GFE F VNSFEQLCINYTNEKL +FFNH+
Sbjct: 440 LFLWLVKKINNVLCQ---ERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHH 496
Query: 250 VFALEQE 256
+F LEQE
Sbjct: 497 MFKLEQE 503
>pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N-
Methylanthraniloyl) Nucleotide Bound To Dictyostelium
Discoideum Myosin Motor Domain
Length = 762
Score = 196 bits (497), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 130/189 (68%), Gaps = 7/189 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G LVAVNP+K + IYTQ V + G + PH+FA+++ AY S+ + NQS +
Sbjct: 117 TYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLL 176
Query: 61 ISGESGAGKTETTKFILQYLCSVT----SNVSTWVEQQILEANTILEAFGNAKTVRNDNS 116
I+GESGAGKTE TK ++QYL SV +N S +EQQIL+AN ILEAFGNAKT RN+NS
Sbjct: 177 ITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNS 236
Query: 117 SRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINK 176
SRFGKF+++ F+ I G IQ YLLE+SR+ FQS ERNYH+FYQL+ A ++ K
Sbjct: 237 SRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSTSERNYHIFYQLLAGA---TAEEK 293
Query: 177 EIMHYTSEE 185
+ +H E
Sbjct: 294 KALHLAGPE 302
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 49/67 (73%), Gaps = 5/67 (7%)
Query: 192 VFAWLVNHINT--CTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHY 249
+F WLV IN C+ + F+GVLDI GFE F VNSFEQLCINYTNEKL +FFNH+
Sbjct: 429 LFLWLVKKINNVLCS---ERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHH 485
Query: 250 VFALEQE 256
+F +EQE
Sbjct: 486 MFKVEQE 492
>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed
With Gdp, Determined As Myosin Fusion
pdb|1JX2|A Chain A, Crystal Structure Of The Nucleotide-Free Dynamin A Gtpase
Domain, Determined As Myosin Fusion
Length = 776
Score = 196 bits (497), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 130/189 (68%), Gaps = 7/189 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G LVAVNP+K + IYTQ V + G + PH+FA+++ AY S+ + NQS +
Sbjct: 128 TYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLL 187
Query: 61 ISGESGAGKTETTKFILQYLCSVT----SNVSTWVEQQILEANTILEAFGNAKTVRNDNS 116
I+GESGAGKTE TK ++QYL SV +N S +EQQIL+AN ILEAFGNAKT RN+NS
Sbjct: 188 ITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNS 247
Query: 117 SRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINK 176
SRFGKF+++ F+ I G IQ YLLE+SR+ FQS ERNYH+FYQL+ A ++ K
Sbjct: 248 SRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGA---TAEEK 304
Query: 177 EIMHYTSEE 185
+ +H E
Sbjct: 305 KALHLAGPE 313
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 48/67 (71%), Gaps = 5/67 (7%)
Query: 192 VFAWLVNHINT--CTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHY 249
+F WLV IN C + F+GVLDI GFE F VNSFEQLCINYTNEKL +FFNH+
Sbjct: 440 LFLWLVKKINNVLCQ---ERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHH 496
Query: 250 VFALEQE 256
+F LEQE
Sbjct: 497 MFKLEQE 503
>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain
From Dictyostelium Discoideum Fused To The Gtpase Domain
Of Dynamin 1 From Rattus Norvegicus
Length = 776
Score = 196 bits (497), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 130/189 (68%), Gaps = 7/189 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G LVAVNP+K + IYTQ V + G + PH+FA+++ AY S+ + NQS +
Sbjct: 128 TYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLL 187
Query: 61 ISGESGAGKTETTKFILQYLCSVT----SNVSTWVEQQILEANTILEAFGNAKTVRNDNS 116
I+GESGAGKTE TK ++QYL SV +N S +EQQIL+AN ILEAFGNAKT RN+NS
Sbjct: 188 ITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNS 247
Query: 117 SRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINK 176
SRFGKF+++ F+ I G IQ YLLE+SR+ FQS ERNYH+FYQL+ A ++ K
Sbjct: 248 SRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGA---TAEEK 304
Query: 177 EIMHYTSEE 185
+ +H E
Sbjct: 305 KALHLAGPE 313
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 48/67 (71%), Gaps = 5/67 (7%)
Query: 192 VFAWLVNHINT--CTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHY 249
+F WLV IN C + F+GVLDI GFE F VNSFEQLCINYTNEKL +FFNH+
Sbjct: 440 LFLWLVKKINNVLCQ---ERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHH 496
Query: 250 VFALEQE 256
+F LEQE
Sbjct: 497 MFKLEQE 503
>pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Befx
Length = 770
Score = 196 bits (497), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 130/189 (68%), Gaps = 7/189 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G LVAVNP+K + IYTQ V + G + PH+FA+++ AY S+ + NQS +
Sbjct: 117 TYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLL 176
Query: 61 ISGESGAGKTETTKFILQYLCSVT----SNVSTWVEQQILEANTILEAFGNAKTVRNDNS 116
I+GESGAGKTE TK ++QYL SV +N S +EQQIL+AN ILEAFGNAKT RN+NS
Sbjct: 177 ITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNS 236
Query: 117 SRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINK 176
SRFGKF+++ F+ I G IQ YLLE+SR+ FQS ERNYH+FYQL+ A ++ K
Sbjct: 237 SRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGA---TAEEK 293
Query: 177 EIMHYTSEE 185
+ +H E
Sbjct: 294 KALHLAGPE 302
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 49/67 (73%), Gaps = 5/67 (7%)
Query: 192 VFAWLVNHINT--CTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHY 249
+F WLV IN C + F+GVLDI+GFE F VNSFEQLCINYTNEKL +FFNH+
Sbjct: 429 LFLWLVKKINNVLCQ---ERKAYFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHH 485
Query: 250 VFALEQE 256
+F LEQE
Sbjct: 486 MFKLEQE 492
>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Resveratrol
Length = 788
Score = 196 bits (497), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 130/189 (68%), Gaps = 7/189 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G LVAVNP+K + IYTQ V + G + PH+FA+++ AY S+ + NQS +
Sbjct: 128 TYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLL 187
Query: 61 ISGESGAGKTETTKFILQYLCSVT----SNVSTWVEQQILEANTILEAFGNAKTVRNDNS 116
I+GESGAGKTE TK ++QYL SV +N S +EQQIL+AN ILEAFGNAKT RN+NS
Sbjct: 188 ITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNS 247
Query: 117 SRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINK 176
SRFGKF+++ F+ I G IQ YLLE+SR+ FQS ERNYH+FYQL+ A ++ K
Sbjct: 248 SRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGA---TAEEK 304
Query: 177 EIMHYTSEE 185
+ +H E
Sbjct: 305 KALHLAGPE 313
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 48/67 (71%), Gaps = 5/67 (7%)
Query: 192 VFAWLVNHINT--CTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHY 249
+F WLV IN C + F+GVLDI GFE F VNSFEQLCINYTNEKL +FFNH+
Sbjct: 440 LFLWLVKKINNVLCQ---ERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHH 496
Query: 250 VFALEQE 256
+F LEQE
Sbjct: 497 MFKLEQE 503
>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And
Specificity For Myosin Ii
pdb|3BZ7|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ8|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ9|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
Length = 762
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 130/189 (68%), Gaps = 7/189 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G LVAVNP+K + IYTQ V + G + PH+FA+++ AY S+ + NQS +
Sbjct: 117 TYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLL 176
Query: 61 ISGESGAGKTETTKFILQYLCSVT----SNVSTWVEQQILEANTILEAFGNAKTVRNDNS 116
I+GESGAGKTE TK ++QYL SV +N S +EQQIL+AN ILEAFGNAKT RN+NS
Sbjct: 177 ITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNS 236
Query: 117 SRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINK 176
SRFGKF+++ F+ I G IQ YLLE+SR+ FQS ERNYH+FYQL+ A ++ K
Sbjct: 237 SRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGA---TAEEK 293
Query: 177 EIMHYTSEE 185
+ +H E
Sbjct: 294 KALHLAGPE 302
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 48/67 (71%), Gaps = 5/67 (7%)
Query: 192 VFAWLVNHINT--CTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHY 249
+F WLV IN C + F+GVLDI GFE F VNSFEQLCINYTNEKL +FFNH+
Sbjct: 429 LFLWLVKKINNVLCQ---ERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHH 485
Query: 250 VFALEQE 256
+F LEQE
Sbjct: 486 MFKLEQE 492
>pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
pdb|2Y8I|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 130/189 (68%), Gaps = 7/189 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G LVAVNP+K + IYTQ V + G + PH+FA+++ AY S+ + NQS +
Sbjct: 116 TYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLL 175
Query: 61 ISGESGAGKTETTKFILQYLCSVT----SNVSTWVEQQILEANTILEAFGNAKTVRNDNS 116
I+GESGAGKTE TK ++QYL SV +N S +EQQIL+AN ILEAFGNAKT RN+NS
Sbjct: 176 ITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNS 235
Query: 117 SRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINK 176
SRFGKF+++ F+ I G IQ YLLE+SR+ FQS ERNYH+FYQL+ A ++ K
Sbjct: 236 SRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGA---TAEEK 292
Query: 177 EIMHYTSEE 185
+ +H E
Sbjct: 293 KALHLAGPE 301
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 48/67 (71%), Gaps = 5/67 (7%)
Query: 192 VFAWLVNHINT--CTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHY 249
+F WLV IN C + F+GVLDI GFE F VNSFEQLCINYTNEKL +FFNH+
Sbjct: 428 LFLWLVKKINNVLCQ---ERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHH 484
Query: 250 VFALEQE 256
+F LEQE
Sbjct: 485 MFKLEQE 491
>pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 130/189 (68%), Gaps = 7/189 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G LVAVNP+K + IYTQ V + G + PH+FA+++ AY S+ + NQS +
Sbjct: 116 TYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLL 175
Query: 61 ISGESGAGKTETTKFILQYLCSVT----SNVSTWVEQQILEANTILEAFGNAKTVRNDNS 116
I+GESGAGKTE TK ++QYL SV +N S +EQQIL+AN ILEAFGNAKT RN+NS
Sbjct: 176 ITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNS 235
Query: 117 SRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINK 176
SRFGKF+++ F+ I G IQ YLLE+SR+ FQS ERNYH+FYQL+ A ++ K
Sbjct: 236 SRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGA---TAEEK 292
Query: 177 EIMHYTSEE 185
+ +H E
Sbjct: 293 KALHLAGPE 301
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 48/67 (71%), Gaps = 5/67 (7%)
Query: 192 VFAWLVNHINT--CTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHY 249
+F WLV IN C + F+GVLDI GFE F VNSFEQLCINYTNEKL +FFNH+
Sbjct: 428 LFLWLVKKINNVLCQ---ERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHH 484
Query: 250 VFALEQE 256
+F LEQE
Sbjct: 485 MFKLEQE 491
>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated
Inhibition Of Myosin Motor Activity
pdb|4AE3|A Chain A, Crystal Structure Of Ammosamide 272:myosin-2 Motor Domain
Complex
Length = 776
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 130/189 (68%), Gaps = 7/189 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G LVAVNP+K + IYTQ V + G + PH+FA+++ AY S+ + NQS +
Sbjct: 116 TYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLL 175
Query: 61 ISGESGAGKTETTKFILQYLCSVT----SNVSTWVEQQILEANTILEAFGNAKTVRNDNS 116
I+GESGAGKTE TK ++QYL SV +N S +EQQIL+AN ILEAFGNAKT RN+NS
Sbjct: 176 ITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNS 235
Query: 117 SRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINK 176
SRFGKF+++ F+ I G IQ YLLE+SR+ FQS ERNYH+FYQL+ A ++ K
Sbjct: 236 SRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGA---TAEEK 292
Query: 177 EIMHYTSEE 185
+ +H E
Sbjct: 293 KALHLAGPE 301
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 48/67 (71%), Gaps = 5/67 (7%)
Query: 192 VFAWLVNHINT--CTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHY 249
+F WLV IN C + F+GVLDI GFE F VNSFEQLCINYTNEKL +FFNH+
Sbjct: 428 LFLWLVKKINNVLCQ---ERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHH 484
Query: 250 VFALEQE 256
+F LEQE
Sbjct: 485 MFKLEQE 491
>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Alf4
Length = 770
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 130/189 (68%), Gaps = 7/189 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G LVAVNP+K + IYTQ V + G + PH+FA+++ AY S+ + NQS +
Sbjct: 117 TYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLL 176
Query: 61 ISGESGAGKTETTKFILQYLCSVT----SNVSTWVEQQILEANTILEAFGNAKTVRNDNS 116
I+GESGAGKTE TK ++QYL SV +N S +EQQIL+AN ILEAFGNAKT RN+NS
Sbjct: 177 ITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNS 236
Query: 117 SRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINK 176
SRFGKF+++ F+ I G IQ YLLE+SR+ FQS ERNYH+FYQL+ A ++ K
Sbjct: 237 SRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGA---TAEEK 293
Query: 177 EIMHYTSEE 185
+ +H E
Sbjct: 294 KALHLAGPE 302
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 49/67 (73%), Gaps = 5/67 (7%)
Query: 192 VFAWLVNHINT--CTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHY 249
+F WLV IN C + F+GVLDI+GFE F VNSFEQLCINYTNEKL +FFNH+
Sbjct: 429 LFLWLVKKINNVLCQ---ERKAYFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHH 485
Query: 250 VFALEQE 256
+F LEQE
Sbjct: 486 MFKLEQE 492
>pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 195 bits (496), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 130/189 (68%), Gaps = 7/189 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G LVAVNP+K + IYTQ V + G + PH+FA+++ AY S+ + NQS +
Sbjct: 117 TYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLL 176
Query: 61 ISGESGAGKTETTKFILQYLCSVT----SNVSTWVEQQILEANTILEAFGNAKTVRNDNS 116
I+GESGAGKTE TK ++QYL SV +N S +EQQIL+AN ILEAFGNAKT RN+NS
Sbjct: 177 ITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNS 236
Query: 117 SRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINK 176
SRFGKF+++ F+ I G IQ YLLE+SR+ FQS ERNYH+FYQL+ A ++ K
Sbjct: 237 SRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSTTERNYHIFYQLLAGA---TAEEK 293
Query: 177 EIMHYTSEE 185
+ +H E
Sbjct: 294 KALHLAGPE 302
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 49/67 (73%), Gaps = 5/67 (7%)
Query: 192 VFAWLVNHINT--CTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHY 249
+F WLV IN C+ + F+GVLDI GFE F VNSFEQLCINYTNEKL +FFNH+
Sbjct: 429 LFLWLVKKINNVLCS---ERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHH 485
Query: 250 VFALEQE 256
+F +EQE
Sbjct: 486 MFKVEQE 492
>pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 195 bits (496), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 130/189 (68%), Gaps = 7/189 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G LVAVNP+K + IYTQ V + G + PH+FA+++ AY S+ + NQS +
Sbjct: 117 TYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLL 176
Query: 61 ISGESGAGKTETTKFILQYLCSVT----SNVSTWVEQQILEANTILEAFGNAKTVRNDNS 116
I+GESGAGKTE TK ++QYL SV +N S +EQQIL+AN ILEAFGNAKT RN+NS
Sbjct: 177 ITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNS 236
Query: 117 SRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINK 176
SRFGKF+++ F+ I G IQ YLLE+SR+ FQS ERNYH+FYQL+ A ++ K
Sbjct: 237 SRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGA---TAEEK 293
Query: 177 EIMHYTSEE 185
+ +H E
Sbjct: 294 KALHLAGPE 302
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 48/67 (71%), Gaps = 5/67 (7%)
Query: 192 VFAWLVNHINT--CTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHY 249
+F WLV IN C + F+GVLDI GFE F VNSFEQLCINYTNEKL +FFNH+
Sbjct: 429 LFLWLVKKINNVLCQ---ERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHH 485
Query: 250 VFALEQE 256
+F LEQE
Sbjct: 486 MFKLEQE 492
>pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 195 bits (496), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 130/189 (68%), Gaps = 7/189 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G LVAVNP+K + IYTQ V + G + PH+FA+++ AY S+ + NQS +
Sbjct: 117 TYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLL 176
Query: 61 ISGESGAGKTETTKFILQYLCSVT----SNVSTWVEQQILEANTILEAFGNAKTVRNDNS 116
I+GESGAGKTE TK ++QYL SV +N S +EQQIL+AN ILEAFGNAKT RN+NS
Sbjct: 177 ITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNS 236
Query: 117 SRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINK 176
SRFGKF+++ F+ I G IQ YLLE+SR+ FQS ERNYH+FYQL+ A ++ K
Sbjct: 237 SRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSTTERNYHIFYQLLAGA---TAEEK 293
Query: 177 EIMHYTSEE 185
+ +H E
Sbjct: 294 KALHLAGPE 302
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 49/67 (73%), Gaps = 5/67 (7%)
Query: 192 VFAWLVNHINT--CTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHY 249
+F WLV IN C+ + F+GVLDI GFE F VNSFEQLCINYTNEKL +FFNH+
Sbjct: 429 LFLWLVKKINNVLCS---ERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHH 485
Query: 250 VFALEQE 256
+F +EQE
Sbjct: 486 MFKVEQE 492
>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With M-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D0Y|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O-Nitrophenyl Aminoethyldiphosphate
Beryllium Fluoride.
pdb|1D0Z|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With P-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1A|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1B|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminopropyldiphosphate
Beryllium Trifluoride.
pdb|1D1C|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With N-Methyl-O-Nitrophenyl
Aminoethyldiphosphate Beryllium Trifluoride
Length = 761
Score = 195 bits (496), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 130/189 (68%), Gaps = 7/189 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G LVAVNP+K + IYTQ V + G + PH+FA+++ AY S+ + NQS +
Sbjct: 117 TYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLL 176
Query: 61 ISGESGAGKTETTKFILQYLCSVT----SNVSTWVEQQILEANTILEAFGNAKTVRNDNS 116
I+GESGAGKTE TK ++QYL SV +N S +EQQIL+AN ILEAFGNAKT RN+NS
Sbjct: 177 ITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNS 236
Query: 117 SRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINK 176
SRFGKF+++ F+ I G IQ YLLE+SR+ FQS ERNYH+FYQL+ A ++ K
Sbjct: 237 SRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGA---TAEEK 293
Query: 177 EIMHYTSEE 185
+ +H E
Sbjct: 294 KALHLAGPE 302
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 48/67 (71%), Gaps = 5/67 (7%)
Query: 192 VFAWLVNHINT--CTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHY 249
+F WLV IN C + F+GVLDI GFE F VNSFEQLCINYTNEKL +FFNH+
Sbjct: 429 LFLWLVKKINNVLCQ---ERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHH 485
Query: 250 VFALEQE 256
+F LEQE
Sbjct: 486 MFKLEQE 492
>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Bef3
pdb|1MND|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Alf4
pdb|1MNE|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mg-Pyrophosphate
pdb|1VOM|A Chain A, Complex Between Dictyostelium Myosin And Mgadp And
Vanadate At 1.9a Resolution
Length = 762
Score = 195 bits (496), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 130/189 (68%), Gaps = 7/189 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G LVAVNP+K + IYTQ V + G + PH+FA+++ AY S+ + NQS +
Sbjct: 117 TYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLL 176
Query: 61 ISGESGAGKTETTKFILQYLCSVT----SNVSTWVEQQILEANTILEAFGNAKTVRNDNS 116
I+GESGAGKTE TK ++QYL SV +N S +EQQIL+AN ILEAFGNAKT RN+NS
Sbjct: 177 ITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNS 236
Query: 117 SRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINK 176
SRFGKF+++ F+ I G IQ YLLE+SR+ FQS ERNYH+FYQL+ A ++ K
Sbjct: 237 SRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGA---TAEEK 293
Query: 177 EIMHYTSEE 185
+ +H E
Sbjct: 294 KALHLAGPE 302
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 50/67 (74%), Gaps = 5/67 (7%)
Query: 192 VFAWLVNHINT--CTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHY 249
+F WLV IN C+ + + F+GVLDI GFE F VNSFEQLCINYTNEKL +FFNH+
Sbjct: 429 LFLWLVKKINNVLCS---ERAAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHH 485
Query: 250 VFALEQE 256
+F +EQE
Sbjct: 486 MFKVEQE 492
>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of
Dictyostellium Myosin Ii
pdb|1FMW|A Chain A, Crystal Structure Of The Mgatp Complex For The Motor
Domain Of Dictyostelium Myosin Ii
Length = 761
Score = 195 bits (496), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 130/189 (68%), Gaps = 7/189 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G LVAVNP+K + IYTQ V + G + PH+FA+++ AY S+ + NQS +
Sbjct: 117 TYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLL 176
Query: 61 ISGESGAGKTETTKFILQYLCSVT----SNVSTWVEQQILEANTILEAFGNAKTVRNDNS 116
I+GESGAGKTE TK ++QYL SV +N S +EQQIL+AN ILEAFGNAKT RN+NS
Sbjct: 177 ITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNS 236
Query: 117 SRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINK 176
SRFGKF+++ F+ I G IQ YLLE+SR+ FQS ERNYH+FYQL+ A ++ K
Sbjct: 237 SRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGA---TAEEK 293
Query: 177 EIMHYTSEE 185
+ +H E
Sbjct: 294 KALHLAGPE 302
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 48/67 (71%), Gaps = 5/67 (7%)
Query: 192 VFAWLVNHINT--CTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHY 249
+F WLV IN C + F+GVLDI GFE F VNSFEQLCINYTNEKL +FFNH+
Sbjct: 429 LFLWLVKKINNVLCQ---ERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHH 485
Query: 250 VFALEQE 256
+F +EQE
Sbjct: 486 MFKVEQE 492
>pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum
Motor Domain S456y Mutant In Complex With
Adp-Orthovanadate
Length = 692
Score = 195 bits (495), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 130/189 (68%), Gaps = 7/189 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G LVAVNP+K + IYTQ V + G + PH+FA+++ AY S+ + NQS +
Sbjct: 116 TYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLL 175
Query: 61 ISGESGAGKTETTKFILQYLCSVT----SNVSTWVEQQILEANTILEAFGNAKTVRNDNS 116
I+GESGAGKTE TK ++QYL SV +N S +EQQIL+AN ILEAFGNAKT RN+NS
Sbjct: 176 ITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNS 235
Query: 117 SRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINK 176
SRFGKF+++ F+ I G IQ YLLE+SR+ FQS ERNYH+FYQL+ A ++ K
Sbjct: 236 SRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGA---TAEEK 292
Query: 177 EIMHYTSEE 185
+ +H E
Sbjct: 293 KALHLAGPE 301
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 49/67 (73%), Gaps = 5/67 (7%)
Query: 192 VFAWLVNHINT--CTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHY 249
+F WLV IN C + F+GVLDI+GFE F VNSFEQLCINYTNEKL +FFNH+
Sbjct: 428 LFLWLVKKINNVLCQ---ERKAYFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHH 484
Query: 250 VFALEQE 256
+F LEQE
Sbjct: 485 MFKLEQE 491
>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYK|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYL|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
Length = 762
Score = 194 bits (494), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 130/189 (68%), Gaps = 7/189 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G LVAVNP+K + IYTQ V + G + PH+FA+++ AY S+ + NQS +
Sbjct: 117 TYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLL 176
Query: 61 ISGESGAGKTETTKFILQYLCSVT----SNVSTWVEQQILEANTILEAFGNAKTVRNDNS 116
I+GESGAGKTE TK ++QYL SV +N S +EQQIL+AN ILEAFGNAKT RN+N+
Sbjct: 177 ITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNA 236
Query: 117 SRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINK 176
SRFGKF+++ F+ I G IQ YLLE+SR+ FQS ERNYH+FYQL+ A ++ K
Sbjct: 237 SRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGA---TAEEK 293
Query: 177 EIMHYTSEE 185
+ +H E
Sbjct: 294 KALHLAGPE 302
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 48/67 (71%), Gaps = 5/67 (7%)
Query: 192 VFAWLVNHINT--CTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHY 249
+F WLV IN C + F+GVLDI GFE F VNSFEQLCINYTNEKL +FFNH+
Sbjct: 429 LFLWLVKKINNVLCQ---ERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHH 485
Query: 250 VFALEQE 256
+F LEQE
Sbjct: 486 MFKLEQE 492
>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With
Tribromodichloropseudilin
Length = 776
Score = 194 bits (493), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 130/189 (68%), Gaps = 7/189 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G LVAVNP+K + IYTQ V + G + PH+FA+++ AY S+ + NQS +
Sbjct: 116 TYSGLFLVAVNPFKIIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLL 175
Query: 61 ISGESGAGKTETTKFILQYLCSVT----SNVSTWVEQQILEANTILEAFGNAKTVRNDNS 116
I+GESGAGKTE TK ++QYL SV +N S +EQQIL+AN ILEAFGNAKT RN+NS
Sbjct: 176 ITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNS 235
Query: 117 SRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINK 176
SRFGKF+++ F+ I G IQ YLLE+SR+ FQS ERNYH+FYQL+ A ++ K
Sbjct: 236 SRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGA---TAEEK 292
Query: 177 EIMHYTSEE 185
+ +H E
Sbjct: 293 KALHLAGPE 301
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 48/67 (71%), Gaps = 5/67 (7%)
Query: 192 VFAWLVNHINT--CTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHY 249
+F WLV IN C + F+GVLDI GFE F VNSFEQLCINYTNEKL +FFNH+
Sbjct: 428 LFLWLVIKINNVLCQ---ERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHH 484
Query: 250 VFALEQE 256
+F LEQE
Sbjct: 485 MFKLEQE 491
>pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentachlorocarbazole
Length = 695
Score = 194 bits (492), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 130/189 (68%), Gaps = 7/189 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G LVAVNP+K + IYTQ V + G + PH+FA+++ AY S+ + NQS +
Sbjct: 116 TYSGLFLVAVNPFKIIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLL 175
Query: 61 ISGESGAGKTETTKFILQYLCSVT----SNVSTWVEQQILEANTILEAFGNAKTVRNDNS 116
I+GESGAGKTE TK ++QYL SV +N S +EQQIL+AN ILEAFGNAKT RN+NS
Sbjct: 176 ITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNS 235
Query: 117 SRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINK 176
SRFGKF+++ F+ I G IQ YLLE+SR+ FQS ERNYH+FYQL+ A ++ K
Sbjct: 236 SRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGA---TAEEK 292
Query: 177 EIMHYTSEE 185
+ +H E
Sbjct: 293 KALHLAGPE 301
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 48/67 (71%), Gaps = 5/67 (7%)
Query: 192 VFAWLVNHINT--CTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHY 249
+F WLV IN C + F+GVLDI GFE F VNSFEQLCINYTNEKL +FFNH+
Sbjct: 428 LFLWLVIKINNVLCQ---ERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHH 484
Query: 250 VFALEQE 256
+F LEQE
Sbjct: 485 MFKLEQE 491
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor
pdb|1G8X|B Chain B, Structure Of A Genetically Engineered Molecular Motor
Length = 1010
Score = 192 bits (489), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 129/189 (68%), Gaps = 7/189 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G LVAVNP+K + IYTQ V + G + PH+FA+++ AY S+ + NQS +
Sbjct: 117 TYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLL 176
Query: 61 ISGESGAGKTETTKFILQYLCSVT----SNVSTWVEQQILEANTILEAFGNAKTVRNDNS 116
I+GESGAGKTE TK ++QYL SV +N S +EQQIL+AN ILEAFGNAKT RN+NS
Sbjct: 177 ITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNS 236
Query: 117 SRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINK 176
S FGKF+++ F+ I G IQ YLLE+SR+ FQS ERNYH+FYQL+ A ++ K
Sbjct: 237 SEFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGA---TAEEK 293
Query: 177 EIMHYTSEE 185
+ +H E
Sbjct: 294 KALHLAGPE 302
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 49/67 (73%), Gaps = 5/67 (7%)
Query: 192 VFAWLVNHINT--CTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHY 249
+F WLV IN C+ + F+GVLDI GFE F VNSFEQLCINYTNEKL +FFNH+
Sbjct: 429 LFLWLVKKINNVLCS---ERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHH 485
Query: 250 VFALEQE 256
+F +EQE
Sbjct: 486 MFKVEQE 492
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|M Chain M, 3-D Structure Of Myosin-V Inhibited State
Length = 1080
Score = 189 bits (480), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 141/230 (61%), Gaps = 9/230 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY G +LVA+NPY++L IY + + Y G MG +PH+FA+AE AY + + NQS +
Sbjct: 101 TYCGIVLVAINPYEQLPIYGEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSII 160
Query: 61 ISGESGAGKTETTKFILQYLCSVTSNVSTW-VEQQILEANTILEAFGNAKTVRNDNSSRF 119
+SGESGAGKT + K+ ++Y +V+ + S VE+++L +N I+E+ GNAKT RNDNSSRF
Sbjct: 161 VSGESGAGKTVSAKYAMRYFATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRF 220
Query: 120 GKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSI----- 174
GK++++ FD ++ I G ++ YLLE+SR+ FQ+ ERNYH+FYQL +A
Sbjct: 221 GKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLG 280
Query: 175 NKEIMHYTSEEKSHVIWVF---AWLVNHINTCTNPGQDSTRFLGVLDIFG 221
N HYT + S VI +VN CT G + +G+ I
Sbjct: 281 NANYFHYTKQGGSPVIDGIDDAKEMVNTRQACTLLGISDSYQMGIFRILA 330
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 46/65 (70%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F W+V+H+N + F+GVLDI+GFE F +NSFEQ CINY NEKL + FN +VF
Sbjct: 411 LFNWIVDHVNKALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVF 470
Query: 252 ALEQE 256
LEQE
Sbjct: 471 KLEQE 475
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|B Chain B, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|C Chain C, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|D Chain D, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
Length = 766
Score = 188 bits (478), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 141/230 (61%), Gaps = 9/230 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY G +LVA+NPY++L IY + + Y G MG +PH+FA+AE AY + + NQS +
Sbjct: 101 TYCGIVLVAINPYEQLPIYGEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSII 160
Query: 61 ISGESGAGKTETTKFILQYLCSVTSNVSTW-VEQQILEANTILEAFGNAKTVRNDNSSRF 119
+SGESGAGKT + K+ ++Y +V+ + S VE+++L +N I+E+ GNAKT RNDNSSRF
Sbjct: 161 VSGESGAGKTVSAKYAMRYFATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRF 220
Query: 120 GKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSI----- 174
GK++++ FD ++ I G ++ YLLE+SR+ FQ+ ERNYH+FYQL +A
Sbjct: 221 GKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLG 280
Query: 175 NKEIMHYTSEEKSHVIWVF---AWLVNHINTCTNPGQDSTRFLGVLDIFG 221
N HYT + S VI +VN CT G + +G+ I
Sbjct: 281 NANYFHYTKQGGSPVIDGIDDAKEMVNTRQACTLLGISDSYQMGIFRILA 330
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 46/65 (70%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F W+V+H+N + F+GVLDI+GFE F +NSFEQ CINY NEKL + FN +VF
Sbjct: 411 LFNWIVDHVNKALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVF 470
Query: 252 ALEQE 256
LEQE
Sbjct: 471 KLEQE 475
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|A Chain A, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 795
Score = 188 bits (477), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 141/230 (61%), Gaps = 9/230 (3%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY G +LVA+NPY++L IY + + Y G MG +PH+FA+AE AY + + NQS +
Sbjct: 101 TYCGIVLVAINPYEQLPIYGEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSII 160
Query: 61 ISGESGAGKTETTKFILQYLCSVTSNVSTW-VEQQILEANTILEAFGNAKTVRNDNSSRF 119
+SGESGAGKT + K+ ++Y +V+ + S VE+++L +N I+E+ GNAKT RNDNSSRF
Sbjct: 161 VSGESGAGKTVSAKYAMRYFATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRF 220
Query: 120 GKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSI----- 174
GK++++ FD ++ I G ++ YLLE+SR+ FQ+ ERNYH+FYQL +A
Sbjct: 221 GKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLG 280
Query: 175 NKEIMHYTSEEKSHVIWVF---AWLVNHINTCTNPGQDSTRFLGVLDIFG 221
N HYT + S VI +VN CT G + +G+ I
Sbjct: 281 NANYFHYTKQGGSPVIDGIDDAKEMVNTRQACTLLGISDSYQMGIFRILA 330
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 46/65 (70%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F W+V+H+N + F+GVLDI+GFE F +NSFEQ CINY NEKL + FN +VF
Sbjct: 411 LFNWIVDHVNKALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVF 470
Query: 252 ALEQE 256
LEQE
Sbjct: 471 KLEQE 475
>pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 840
Score = 184 bits (467), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 122/180 (67%), Gaps = 12/180 (6%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G +AVNPY+ L IYT S + +Y G + PH+F++A+ AY ++ NQSC+
Sbjct: 114 TYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCL 173
Query: 61 ISGESGAGKTETTKFILQYLCSVTSNV------------STWVEQQILEANTILEAFGNA 108
I+GESGAGKTE+TK ++ Y V +N+ ++ +E QI+EAN +LEAFGNA
Sbjct: 174 ITGESGAGKTESTKKVIMYFARVAANLYKQKEEPVPNLRASNLEDQIIEANPVLEAFGNA 233
Query: 109 KTVRNDNSSRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAA 168
KTVRN+NSSRFGKF+++ F P I G I+ YLLE+SR+T+Q ERNYH+FYQ+ A
Sbjct: 234 KTVRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICSNA 293
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 46/65 (70%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F WLV +N + ++GVLDI GFE F NSFEQLCINYTNE+L +FFNH++F
Sbjct: 435 MFNWLVKRVNRTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMF 494
Query: 252 ALEQE 256
LEQE
Sbjct: 495 VLEQE 499
>pdb|1B7T|A Chain A, Myosin Digested By Papain
pdb|1L2O|A Chain A, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|A Chain A, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|A Chain A, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
Length = 835
Score = 178 bits (451), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/179 (48%), Positives = 117/179 (65%), Gaps = 11/179 (6%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G +AVNPY+ L IYT S + +Y G + PH+F++A+ AY ++ NQSC+
Sbjct: 114 TYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCL 173
Query: 61 ISGESGAGKTETTKFILQYLCSVTSNVSTW-----------VEQQILEANTILEAFGNAK 109
I+GESGAGKTE TK ++ YL V V +E QI++AN +LEA+GNAK
Sbjct: 174 ITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEGSLEDQIIQANPVLEAYGNAK 233
Query: 110 TVRNDNSSRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAA 168
T RN+NSSRFGKF+++ F P I G I+ YLLE+SR+T+Q ERNYH+FYQ+ A
Sbjct: 234 TTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICSNA 292
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 46/65 (70%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F WLV +N + ++GVLDI GFE F NSFEQLCINYTNE+L +FFNH++F
Sbjct: 434 MFNWLVRRVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMF 493
Query: 252 ALEQE 256
LEQE
Sbjct: 494 ILEQE 498
>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|A Chain A, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|A Chain A, Structure Of Nucleotide-free Scallop Myosin S1
Length = 840
Score = 177 bits (450), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/179 (48%), Positives = 117/179 (65%), Gaps = 11/179 (6%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G +AVNPY+ L IYT S + +Y G + PH+F++A+ AY ++ NQSC+
Sbjct: 114 TYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCL 173
Query: 61 ISGESGAGKTETTKFILQYLCSVTSNVSTW-----------VEQQILEANTILEAFGNAK 109
I+GESGAGKTE TK ++ YL V V +E QI++AN +LEA+GNAK
Sbjct: 174 ITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEGSLEDQIIQANPVLEAYGNAK 233
Query: 110 TVRNDNSSRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAA 168
T RN+NSSRFGKF+++ F P I G I+ YLLE+SR+T+Q ERNYH+FYQ+ A
Sbjct: 234 TTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICSNA 292
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 46/65 (70%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F WLV +N + ++GVLDI GFE F NSFEQLCINYTNE+L +FFNH++F
Sbjct: 434 MFNWLVRRVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMF 493
Query: 252 ALEQE 256
LEQE
Sbjct: 494 ILEQE 498
>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation
pdb|1KK8|A Chain A, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 837
Score = 177 bits (450), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/179 (48%), Positives = 117/179 (65%), Gaps = 11/179 (6%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G +AVNPY+ L IYT S + +Y G + PH+F++A+ AY ++ NQSC+
Sbjct: 114 TYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCL 173
Query: 61 ISGESGAGKTETTKFILQYLCSVTSNVSTW-----------VEQQILEANTILEAFGNAK 109
I+GESGAGKTE TK ++ YL V V +E QI++AN +LEA+GNAK
Sbjct: 174 ITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEGSLEDQIIQANPVLEAYGNAK 233
Query: 110 TVRNDNSSRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAA 168
T RN+NSSRFGKF+++ F P I G I+ YLLE+SR+T+Q ERNYH+FYQ+ A
Sbjct: 234 TTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICSNA 292
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 46/65 (70%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F WLV +N + ++GVLDI GFE F NSFEQLCINYTNE+L +FFNH++F
Sbjct: 434 MFNWLVRRVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMF 493
Query: 252 ALEQE 256
LEQE
Sbjct: 494 ILEQE 498
>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State
Length = 830
Score = 177 bits (450), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/179 (48%), Positives = 117/179 (65%), Gaps = 11/179 (6%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G +AVNPY+ L IYT S + +Y G + PH+F++A+ AY ++ NQSC+
Sbjct: 109 TYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCL 168
Query: 61 ISGESGAGKTETTKFILQYLCSVTSNVSTW-----------VEQQILEANTILEAFGNAK 109
I+GESGAGKTE TK ++ YL V V +E QI++AN +LEA+GNAK
Sbjct: 169 ITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEGSLEDQIIQANPVLEAYGNAK 228
Query: 110 TVRNDNSSRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAA 168
T RN+NSSRFGKF+++ F P I G I+ YLLE+SR+T+Q ERNYH+FYQ+ A
Sbjct: 229 TTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICSNA 287
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 46/65 (70%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F WLV +N + ++GVLDI GFE F NSFEQLCINYTNE+L +FFNH++F
Sbjct: 429 MFNWLVRRVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMF 488
Query: 252 ALEQE 256
LEQE
Sbjct: 489 ILEQE 493
>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|B Chain B, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|2W4T|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 831
Score = 177 bits (450), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/179 (48%), Positives = 117/179 (65%), Gaps = 11/179 (6%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G +AVNPY+ L IYT S + +Y G + PH+F++A+ AY ++ NQSC+
Sbjct: 110 TYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCL 169
Query: 61 ISGESGAGKTETTKFILQYLCSVTSNVSTW-----------VEQQILEANTILEAFGNAK 109
I+GESGAGKTE TK ++ YL V V +E QI++AN +LEA+GNAK
Sbjct: 170 ITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEGSLEDQIIQANPVLEAYGNAK 229
Query: 110 TVRNDNSSRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAA 168
T RN+NSSRFGKF+++ F P I G I+ YLLE+SR+T+Q ERNYH+FYQ+ A
Sbjct: 230 TTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICSNA 288
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 46/65 (70%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F WLV +N + ++GVLDI GFE F NSFEQLCINYTNE+L +FFNH++F
Sbjct: 430 MFNWLVRRVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMF 489
Query: 252 ALEQE 256
LEQE
Sbjct: 490 ILEQE 494
>pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii
Length = 838
Score = 177 bits (449), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 119/181 (65%), Gaps = 13/181 (7%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G +AVNPY+ L IYT S + +Y G + PH+F++A+ AY ++ NQSC+
Sbjct: 114 TYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCL 173
Query: 61 ISGESGAGKTETTKFILQYL----CSVTSNVSTW---------VEQQILEANTILEAFGN 107
I+GESGAGKTE TK ++ YL C+V S +E QI++AN +LEA+GN
Sbjct: 174 ITGESGAGKTENTKKVIMYLAKVACAVKKKTSEEEEADQKKGSLEDQIIQANPVLEAYGN 233
Query: 108 AKTVRNDNSSRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEA 167
AKT RN+NSSRFGKF+++ F P I G I+ YLLE+SR+T+Q ERNYH+FYQ+
Sbjct: 234 AKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICSN 293
Query: 168 A 168
A
Sbjct: 294 A 294
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 46/65 (70%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F WLV +N + ++GVLDI GFE F NSFEQLCINYTNE+L +FFNH++F
Sbjct: 436 MFNWLVKRVNRTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMF 495
Query: 252 ALEQE 256
LEQE
Sbjct: 496 VLEQE 500
>pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
pdb|4E7S|B Chain B, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
Length = 798
Score = 177 bits (448), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 127/186 (68%), Gaps = 5/186 (2%)
Query: 1 TYTGTILVAVNPYKEL-DIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSC 59
TY IL+AVNPY ++ IY+ + Y G +G+ PHVFA+A+ A+ ++ L ++QS
Sbjct: 97 TYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSI 156
Query: 60 VISGESGAGKTETTKFILQYLCSVTSNVSTWVEQQILEANTILEAFGNAKTVRNDNSSRF 119
++SGESGAGKTE TKF+L+YL + ++ +I+EAN +LEAFGNAKTVRN+NSSRF
Sbjct: 157 IVSGESGAGKTENTKFVLRYLTE-SYGTGQDIDDRIVEANPLLEAFGNAKTVRNNNSSRF 215
Query: 120 GKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINKEIM 179
GKF+++ F+ K + G + YLLE+SRI Q ERNYH+FY+L A S I +E +
Sbjct: 216 GKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGA--SEDI-RERL 272
Query: 180 HYTSEE 185
H +S +
Sbjct: 273 HLSSPD 278
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F +VN +N C P + S+ F+GVLDI GFE F NSFEQ CINY NEKL +FFN +
Sbjct: 440 LFDHVVNRVNQCF-PFETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERIL 498
Query: 252 ALEQEI 257
EQE+
Sbjct: 499 KEEQEL 504
>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4)
Length = 784
Score = 177 bits (448), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 127/186 (68%), Gaps = 5/186 (2%)
Query: 1 TYTGTILVAVNPYKEL-DIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSC 59
TY IL+AVNPY ++ IY+ + Y G +G+ PHVFA+A+ A+ ++ L ++QS
Sbjct: 84 TYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSI 143
Query: 60 VISGESGAGKTETTKFILQYLCSVTSNVSTWVEQQILEANTILEAFGNAKTVRNDNSSRF 119
++SGESGAGKTE TKF+L+YL + ++ +I+EAN +LEAFGNAKTVRN+NSSRF
Sbjct: 144 IVSGESGAGKTENTKFVLRYLTE-SYGTGQDIDDRIVEANPLLEAFGNAKTVRNNNSSRF 202
Query: 120 GKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINKEIM 179
GKF+++ F+ K + G + YLLE+SRI Q ERNYH+FY+L A S I +E +
Sbjct: 203 GKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGA--SEDI-RERL 259
Query: 180 HYTSEE 185
H +S +
Sbjct: 260 HLSSPD 265
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F +VN +N C P + S+ F+GVLDI GFE F NSFEQ CINY NEKL +FFN +
Sbjct: 427 LFDHVVNRVNQCF-PFETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERIL 485
Query: 252 ALEQEI 257
EQE+
Sbjct: 486 KEEQEL 491
>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
pdb|4E7Z|B Chain B, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
Length = 798
Score = 177 bits (448), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 127/186 (68%), Gaps = 5/186 (2%)
Query: 1 TYTGTILVAVNPYKEL-DIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSC 59
TY IL+AVNPY ++ IY+ + Y G +G+ PHVFA+A+ A+ ++ L ++QS
Sbjct: 97 TYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSI 156
Query: 60 VISGESGAGKTETTKFILQYLCSVTSNVSTWVEQQILEANTILEAFGNAKTVRNDNSSRF 119
++SGESGAGKTE TKF+L+YL + ++ +I+EAN +LEAFGNAKTVRN+NSSRF
Sbjct: 157 IVSGESGAGKTENTKFVLRYLTE-SYGTGQDIDDRIVEANPLLEAFGNAKTVRNNNSSRF 215
Query: 120 GKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINKEIM 179
GKF+++ F+ K + G + YLLE+SRI Q ERNYH+FY+L A S I +E +
Sbjct: 216 GKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGA--SEDI-RERL 272
Query: 180 HYTSEE 185
H +S +
Sbjct: 273 HLSSPD 278
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F +VN +N C P + S+ F+GVLDI GFE F NSFEQ CINY NEKL +FFN +
Sbjct: 440 LFDHVVNRVNQCF-PFETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERIL 498
Query: 252 ALEQEI 257
EQE+
Sbjct: 499 KEEQEL 504
>pdb|2X51|A Chain A, M6 Delta Insert1
Length = 789
Score = 177 bits (448), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 127/186 (68%), Gaps = 5/186 (2%)
Query: 1 TYTGTILVAVNPYKEL-DIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSC 59
TY IL+AVNPY ++ IY+ + Y G +G+ PHVFA+A+ A+ ++ L ++QS
Sbjct: 88 TYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSI 147
Query: 60 VISGESGAGKTETTKFILQYLCSVTSNVSTWVEQQILEANTILEAFGNAKTVRNDNSSRF 119
++SGESGAGKTE TKF+L+YL + ++ +I+EAN +LEAFGNAKTVRN+NSSRF
Sbjct: 148 IVSGESGAGKTENTKFVLRYLTE-SYGTGQDIDDRIVEANPLLEAFGNAKTVRNNNSSRF 206
Query: 120 GKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINKEIM 179
GKF+++ F+ K + G + YLLE+SRI Q ERNYH+FY+L A S I +E +
Sbjct: 207 GKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGA--SEDI-RERL 263
Query: 180 HYTSEE 185
H +S +
Sbjct: 264 HLSSPD 269
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F +VN +N C P + S+ F+GVLDI GFE F NSFEQ CINY NEKL +FFN +
Sbjct: 405 LFDHVVNRVNQCF-PFETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERIL 463
Query: 252 ALEQEI 257
EQE+
Sbjct: 464 KEEQEL 469
>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|2VB6|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 788
Score = 176 bits (447), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 127/186 (68%), Gaps = 5/186 (2%)
Query: 1 TYTGTILVAVNPYKEL-DIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSC 59
TY IL+AVNPY ++ IY+ + Y G +G+ PHVFA+A+ A+ ++ L ++QS
Sbjct: 87 TYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSI 146
Query: 60 VISGESGAGKTETTKFILQYLCSVTSNVSTWVEQQILEANTILEAFGNAKTVRNDNSSRF 119
++SGESGAGKTE TKF+L+YL + ++ +I+EAN +LEAFGNAKTVRN+NSSRF
Sbjct: 147 IVSGESGAGKTENTKFVLRYLTE-SYGTGQDIDDRIVEANPLLEAFGNAKTVRNNNSSRF 205
Query: 120 GKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINKEIM 179
GKF+++ F+ K + G + YLLE+SRI Q ERNYH+FY+L A S I +E +
Sbjct: 206 GKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGA--SEDI-RERL 262
Query: 180 HYTSEE 185
H +S +
Sbjct: 263 HLSSPD 268
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F +VN +N C P + S+ F+GVLDI GFE F NSFEQ CINY NEKL +FFN +
Sbjct: 404 LFDHVVNRVNQCF-PFETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERIL 462
Query: 252 ALEQEI 257
EQE+
Sbjct: 463 KEEQEL 468
>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
Length = 1052
Score = 176 bits (447), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 127/186 (68%), Gaps = 5/186 (2%)
Query: 1 TYTGTILVAVNPYKEL-DIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSC 59
TY IL+AVNPY ++ IY+ + Y G +G+ PHVFA+A+ A+ ++ L ++QS
Sbjct: 88 TYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSI 147
Query: 60 VISGESGAGKTETTKFILQYLCSVTSNVSTWVEQQILEANTILEAFGNAKTVRNDNSSRF 119
++SGESGAGKTE TKF+L+YL + ++ +I+EAN +LEAFGNAKTVRN+NSSRF
Sbjct: 148 IVSGESGAGKTENTKFVLRYLTE-SYGTGQDIDDRIVEANPLLEAFGNAKTVRNNNSSRF 206
Query: 120 GKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINKEIM 179
GKF+++ F+ K + G + YLLE+SRI Q ERNYH+FY+L A S I +E +
Sbjct: 207 GKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGA--SEDI-RERL 263
Query: 180 HYTSEE 185
H +S +
Sbjct: 264 HLSSPD 269
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F +VN +N C P + S+ F+GVLDI GFE F NSFEQ CINY NEKL +FFN +
Sbjct: 431 LFDHVVNRVNQCF-PFETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERIL 489
Query: 252 ALEQEI 257
EQE+
Sbjct: 490 KEEQEL 495
>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
Length = 814
Score = 176 bits (447), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 127/186 (68%), Gaps = 5/186 (2%)
Query: 1 TYTGTILVAVNPYKEL-DIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSC 59
TY IL+AVNPY ++ IY+ + Y G +G+ PHVFA+A+ A+ ++ L ++QS
Sbjct: 87 TYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSI 146
Query: 60 VISGESGAGKTETTKFILQYLCSVTSNVSTWVEQQILEANTILEAFGNAKTVRNDNSSRF 119
++SGESGAGKTE TKF+L+YL + ++ +I+EAN +LEAFGNAKTVRN+NSSRF
Sbjct: 147 IVSGESGAGKTENTKFVLRYLTE-SYGTGQDIDDRIVEANPLLEAFGNAKTVRNNNSSRF 205
Query: 120 GKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINKEIM 179
GKF+++ F+ K + G + YLLE+SRI Q ERNYH+FY+L A S I +E +
Sbjct: 206 GKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGA--SEDI-RERL 262
Query: 180 HYTSEE 185
H +S +
Sbjct: 263 HLSSPD 268
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F +VN +N C P + S+ F+GVLDI GFE F NSFEQ CINY NEKL +FFN +
Sbjct: 430 LFDHVVNRVNQCF-PFETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERIL 488
Query: 252 ALEQEI 257
EQE+
Sbjct: 489 KEEQEL 494
>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
Length = 858
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 127/186 (68%), Gaps = 5/186 (2%)
Query: 1 TYTGTILVAVNPYKEL-DIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSC 59
TY IL+AVNPY ++ IY+ + Y G +G+ PHVFA+A+ A+ ++ L ++QS
Sbjct: 88 TYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSI 147
Query: 60 VISGESGAGKTETTKFILQYLCSVTSNVSTWVEQQILEANTILEAFGNAKTVRNDNSSRF 119
++SGESGAGKTE TKF+L+YL + ++ +I+EAN +LEAFGNAKTVRN+NSSRF
Sbjct: 148 IVSGESGAGKTENTKFVLRYLTE-SYGTGQDIDDRIVEANPLLEAFGNAKTVRNNNSSRF 206
Query: 120 GKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINKEIM 179
GKF+++ F+ K + G + YLLE+SRI Q ERNYH+FY+L A S I +E +
Sbjct: 207 GKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGA--SEDI-RERL 263
Query: 180 HYTSEE 185
H +S +
Sbjct: 264 HLSSPD 269
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F +VN +N C P + S+ F+GVLDI GFE F NSFEQ CINY NEKL +FFN +
Sbjct: 431 LFDHVVNRVNQCF-PFETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERIL 489
Query: 252 ALEQEI 257
EQE+
Sbjct: 490 KEEQEL 495
>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
Length = 814
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 127/186 (68%), Gaps = 5/186 (2%)
Query: 1 TYTGTILVAVNPYKEL-DIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSC 59
TY IL+AVNPY ++ IY+ + Y G +G+ PHVFA+A+ A+ ++ L ++QS
Sbjct: 87 TYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSI 146
Query: 60 VISGESGAGKTETTKFILQYLCSVTSNVSTWVEQQILEANTILEAFGNAKTVRNDNSSRF 119
++SGESGAGKTE TKF+L+YL + ++ +I+EAN +LEAFGNAKTVRN+NSSRF
Sbjct: 147 IVSGESGAGKTENTKFVLRYLTE-SYGTGQDIDDRIVEANPLLEAFGNAKTVRNNNSSRF 205
Query: 120 GKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINKEIM 179
GKF+++ F+ K + G + YLLE+SRI Q ERNYH+FY+L A S I +E +
Sbjct: 206 GKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGA--SEDI-RERL 262
Query: 180 HYTSEE 185
H +S +
Sbjct: 263 HLSSPD 268
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F +VN +N C P + S+ F+GVLDI GFE F NSFEQ CINY NEKL +FFN +
Sbjct: 430 LFDHVVNRVNQCF-PFETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERIL 488
Query: 252 ALEQEI 257
EQE+
Sbjct: 489 KEEQEL 494
>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State
Length = 786
Score = 175 bits (443), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 126/186 (67%), Gaps = 5/186 (2%)
Query: 1 TYTGTILVAVNPYKEL-DIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSC 59
TY IL+AVNPY ++ IY+ + Y G +G+ PHVFA+A+ A+ ++ L ++QS
Sbjct: 85 TYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSI 144
Query: 60 VISGESGAGKTETTKFILQYLCSVTSNVSTWVEQQILEANTILEAFGNAKTVRNDNSSRF 119
++SGESGAGKTE TKF+L+YL + + +I+EAN +LEAFGNAKTVRN+NSSRF
Sbjct: 145 IVSGESGAGKTENTKFVLRYLTE-SYGTGQDIYDRIVEANPLLEAFGNAKTVRNNNSSRF 203
Query: 120 GKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINKEIM 179
GKF+++ F+ K + G + YLLE+SRI Q ERNYH+FY+L A S I +E +
Sbjct: 204 GKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGA--SEDI-RERL 260
Query: 180 HYTSEE 185
H +S +
Sbjct: 261 HLSSPD 266
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F +VN +N C P + S+ F+GVLDI GFE F NSFEQ CINY NEKL +FFN +
Sbjct: 428 LFDHVVNRVNQCF-PFETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERIL 486
Query: 252 ALEQEI 257
EQE+
Sbjct: 487 KEEQEL 492
>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
Length = 814
Score = 174 bits (442), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 126/186 (67%), Gaps = 5/186 (2%)
Query: 1 TYTGTILVAVNPYKEL-DIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSC 59
TY IL+AVNPY ++ IY+ + Y G +G+ PHVFA+A+ A+ ++ L ++QS
Sbjct: 87 TYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSI 146
Query: 60 VISGESGAGKTETTKFILQYLCSVTSNVSTWVEQQILEANTILEAFGNAKTVRNDNSSRF 119
++SGESGAGKTE TKF+L+YL + + +I+EAN +LEAFGNAKTVRN+NSSRF
Sbjct: 147 IVSGESGAGKTENTKFVLRYLTE-SYGTGQDIYDRIVEANPLLEAFGNAKTVRNNNSSRF 205
Query: 120 GKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINKEIM 179
GKF+++ F+ K + G + YLLE+SRI Q ERNYH+FY+L A S I +E +
Sbjct: 206 GKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGA--SEDI-RERL 262
Query: 180 HYTSEE 185
H +S +
Sbjct: 263 HLSSPD 268
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F +VN +N C P + S+ F+GVLDI GFE F NSFEQ CINY NEKL +FFN +
Sbjct: 430 LFDHVVNRVNQCF-PFETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERIL 488
Query: 252 ALEQEI 257
EQE+
Sbjct: 489 KEEQEL 494
>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 788
Score = 174 bits (442), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 126/186 (67%), Gaps = 5/186 (2%)
Query: 1 TYTGTILVAVNPYKEL-DIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSC 59
TY IL+AVNPY ++ IY+ + Y G +G+ PHVFA+A+ A+ ++ L ++QS
Sbjct: 87 TYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKLSQSI 146
Query: 60 VISGESGAGKTETTKFILQYLCSVTSNVSTWVEQQILEANTILEAFGNAKTVRNDNSSRF 119
++SGESGAGKTE TKF+L+YL + + +I+EAN +LEAFGNAKTVRN+NSSRF
Sbjct: 147 IVSGESGAGKTENTKFVLRYLTE-SYGTGQDIYDRIVEANPLLEAFGNAKTVRNNNSSRF 205
Query: 120 GKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSSSINKEIM 179
GKF+++ F+ K + G + YLLE+SRI Q ERNYH+FY+L A S I +E +
Sbjct: 206 GKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGA--SEDI-RERL 262
Query: 180 HYTSEE 185
H +S +
Sbjct: 263 HLSSPD 268
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F +VN +N C P + S+ F+GVLDI GFE F NSFEQ CINY NEKL +FFN +
Sbjct: 404 LFDHVVNRVNQCF-PFETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERIL 462
Query: 252 ALEQEI 257
EQE+
Sbjct: 463 KEEQEL 468
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|A Chain A, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|A Chain A, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|A Chain A, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 839
Score = 170 bits (431), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 118/184 (64%), Gaps = 16/184 (8%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G +A+NPY+ L IYTQ V +Y G + PH+F++A+ AY + NQS +
Sbjct: 114 TYSGLFCIAINPYRRLPIYTQGLVDKYRGKRRAEMPPHLFSIADNAYQYMLQDRENQSML 173
Query: 61 ISGESGAGKTETTKFILQYLCSVTSNVSTW----------------VEQQILEANTILEA 104
I+GESGAGKTE TK ++QY V ++++ +E QI++ N +LEA
Sbjct: 174 ITGESGAGKTENTKKVIQYFALVAASLAGKKDKKEEEKKKDEKKGTLEDQIVQCNPVLEA 233
Query: 105 FGNAKTVRNDNSSRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQL 164
+GNAKT RN+NSSRFGKF+++ F + I G I+ YLLE+SR+T+Q ERNYH+FYQL
Sbjct: 234 YGNAKTTRNNNSSRFGKFIRIHFGTQGKIAGADIETYLLEKSRVTYQQSAERNYHIFYQL 293
Query: 165 VEAA 168
+ A
Sbjct: 294 LSPA 297
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 46/65 (70%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F WLV +N + F+GVLDI GFE F NSFEQLCINYTNE+L +FFNH++F
Sbjct: 437 MFNWLVRRVNQTLDTKAKRQFFIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMF 496
Query: 252 ALEQE 256
LEQE
Sbjct: 497 VLEQE 501
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In
Pre-power Stroke State
Length = 995
Score = 170 bits (430), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 140/233 (60%), Gaps = 22/233 (9%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G V +NPYK+L IYT++ V Y G K PHV+A+ E AY S+ +QS +
Sbjct: 91 TYSGLFCVVINPYKQLPIYTEAIVEMYRGKKRHEVPPHVYAVTEGAYRSMLQDREDQSIL 150
Query: 61 ISGESGAGKTETTKFILQYLCSVTSN--------VSTWVEQQILEANTILEAFGNAKTVR 112
+GESGAGKTE TK ++QYL V S+ V +E+Q+L+AN ILEAFGNAKTV+
Sbjct: 151 CTGESGAGKTENTKKVIQYLAHVASSPKGRKEPGVPGELERQLLQANPILEAFGNAKTVK 210
Query: 113 NDNSSRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYSS 172
NDNSSRFGKF+++ FD I G I+ YLLE+SR Q+ E ++H+FYQL+ A
Sbjct: 211 NDNSSRFGKFIRINFDVAGYIVGANIETYLLEKSRAIRQAKDECSFHIFYQLLGGA--GE 268
Query: 173 SINKEIMHYTSEEKSHVIWVFAWLVNHINTCTNPGQDSTRF---LGVLDIFGF 222
+ +++ E SH + +L N ++PGQ+ F L L + GF
Sbjct: 269 QLKADLLL---EPCSH----YRFLTN--GPSSSPGQERELFQETLESLRVLGF 312
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 49/67 (73%), Gaps = 3/67 (4%)
Query: 192 VFAWLVNHINTCTN--PGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHY 249
+F WLV +N + P Q ++ FLG+LDI GFE F +NSFEQLCINYTNEKL + FNH
Sbjct: 406 LFRWLVLRLNRALDRSPRQGAS-FLGILDIAGFEIFQLNSFEQLCINYTNEKLQQLFNHT 464
Query: 250 VFALEQE 256
+F LEQE
Sbjct: 465 MFVLEQE 471
>pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|B Chain B, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|C Chain C, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|D Chain D, Motor Domain Of Myoe, A Class-I Myosin
Length = 697
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 120/174 (68%), Gaps = 3/174 (1%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY G ++++ NP+K L+IY +S + Y+G PH++ALA AY S++ NQ +
Sbjct: 39 TYIGDVVISTNPFKNLNIYKESDIKAYNGRYKYEMPPHMYALANDAYRSMRQSQENQCVI 98
Query: 61 ISGESGAGKTETTKFILQYLCSVTSNVST---WVEQQILEANTILEAFGNAKTVRNDNSS 117
ISGESGAGKTE +K I+Q+L V+SN S + + +L++N +LEAFGNAKT+RNDNSS
Sbjct: 99 ISGESGAGKTEASKKIMQFLTFVSSNQSPNGERISKMLLDSNPLLEAFGNAKTLRNDNSS 158
Query: 118 RFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYS 171
RFGK+M++ F+ G I +YLLE+SR+ ++ GER++H+FYQ+++ S
Sbjct: 159 RFGKYMEMQFNAVGSPIGGKITNYLLEKSRVVGRTQGERSFHIFYQMLKGLSQS 212
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 40/65 (61%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F WLV+ INT N + +G+LDI+GFE F NSFEQL IN+ NEKL + F
Sbjct: 360 LFNWLVSKINTIINCTTEKGPVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTL 419
Query: 252 ALEQE 256
EQE
Sbjct: 420 KSEQE 424
>pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7H|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7L|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
Length = 697
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 120/174 (68%), Gaps = 3/174 (1%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY G ++++ NP+K L+IY +S + Y+G PH++ALA AY S++ NQ +
Sbjct: 39 TYIGDVVISTNPFKNLNIYKESDIKAYNGRYKYEMPPHMYALANDAYRSMRQSQENQCVI 98
Query: 61 ISGESGAGKTETTKFILQYLCSVTSNVST---WVEQQILEANTILEAFGNAKTVRNDNSS 117
ISGESGAGKTE +K I+Q+L V+SN S + + +L++N +LEAFGNAKT+RNDNSS
Sbjct: 99 ISGESGAGKTEASKKIMQFLTFVSSNQSPNGERISKMLLDSNPLLEAFGNAKTLRNDNSS 158
Query: 118 RFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLVEAAQYS 171
RFGK+M++ F+ G I +YLLE+SR+ ++ GER++H+FYQ+++ S
Sbjct: 159 RFGKYMEMQFNAVGSPIGGKITNYLLEKSRVVGRTQGERSFHIFYQMLKGLSQS 212
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 40/65 (61%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F WLV+ INT N + +G+LDI+GFE F NSFEQL IN+ NEKL + F
Sbjct: 360 LFNWLVSKINTIINCTTEKGPVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTL 419
Query: 252 ALEQE 256
EQE
Sbjct: 420 KSEQE 424
>pdb|2W4A|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 840
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 112/176 (63%), Gaps = 11/176 (6%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G V VNPYK L +Y V Y G K PH+F++++ AY + NQS +
Sbjct: 114 TYSGLFCVTVNPYKWLPVYNPKVVLAYRGKKRQEAPPHIFSISDNAYQFMLTDRENQSIL 173
Query: 61 ISGESGAGKTETTKFILQYLCSVTSN-----------VSTWVEQQILEANTILEAFGNAK 109
I+GESGAGKT TK ++QY ++ ++ + +E QI+ AN +LEAFGNAK
Sbjct: 174 ITGESGAGKTVNTKRVIQYFATIAASGEKKKEEQSGKMQGTLEDQIISANPLLEAFGNAK 233
Query: 110 TVRNDNSSRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLV 165
TVRNDNSSRFGKF+++ F + I+ YLLE+SR+TFQ P ER+YH+FYQ++
Sbjct: 234 TVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVTFQLPAERSYHIFYQIM 289
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 47/65 (72%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F W+V IN + Q F+GVLDI GFE F NSFEQLCIN+TNEKL +FFNH++F
Sbjct: 434 MFLWMVIRINQQLDTKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMF 493
Query: 252 ALEQE 256
LEQE
Sbjct: 494 VLEQE 498
>pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|B Chain B, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|C Chain C, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|D Chain D, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|E Chain E, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|F Chain F, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
Length = 791
Score = 163 bits (413), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 115/183 (62%), Gaps = 15/183 (8%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G V +NPYK+L IY++ + Y G K PH++A+A+ AY S+ +QS +
Sbjct: 114 TYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYAIADTAYRSMLQDREDQSIL 173
Query: 61 ISGESGAGKTETTKFILQYLCSVTSNVSTW---------------VEQQILEANTILEAF 105
+GESGAGKTE TK ++QYL V S+ +E+Q+L+AN ILEAF
Sbjct: 174 CTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQGPSFSYGELEKQLLQANPILEAF 233
Query: 106 GNAKTVRNDNSSRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLV 165
GNAKTV+NDNSSRFGKF+++ FD I G I+ YLLE+SR Q+ ER +H+FY L+
Sbjct: 234 GNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKDERTFHIFYYLI 293
Query: 166 EAA 168
A
Sbjct: 294 AGA 296
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 192 VFAWLVNHINTCTNP-GQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYV 250
+F W++ +N + + FLG+LDI GFE F +NSFEQLCINYTNEKL + FNH +
Sbjct: 437 LFRWILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTM 496
Query: 251 FALEQE 256
F LEQE
Sbjct: 497 FILEQE 502
>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
Length = 820
Score = 163 bits (413), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 115/183 (62%), Gaps = 15/183 (8%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G V +NPYK+L IY++ + Y G K PH++A+A+ AY S+ +QS +
Sbjct: 114 TYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYAIADTAYRSMLQDREDQSIL 173
Query: 61 ISGESGAGKTETTKFILQYLCSVTSNVSTW---------------VEQQILEANTILEAF 105
+GESGAGKTE TK ++QYL V S+ +E+Q+L+AN ILEAF
Sbjct: 174 CTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQGPSFSYGELEKQLLQANPILEAF 233
Query: 106 GNAKTVRNDNSSRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLV 165
GNAKTV+NDNSSRFGKF+++ FD I G I+ YLLE+SR Q+ ER +H+FY L+
Sbjct: 234 GNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKDERTFHIFYYLI 293
Query: 166 EAA 168
A
Sbjct: 294 AGA 296
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 192 VFAWLVNHINTCTNP-GQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYV 250
+F W++ +N + + FLG+LDI GFE F +NSFEQLCINYTNEKL + FNH +
Sbjct: 437 LFRWILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTM 496
Query: 251 FALEQE 256
F LEQE
Sbjct: 497 FILEQE 502
>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 971
Score = 163 bits (413), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 115/183 (62%), Gaps = 15/183 (8%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G V +NPYK+L IY++ + Y G K PH++A+A+ AY S+ +QS +
Sbjct: 114 TYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYAIADTAYRSMLQDREDQSIL 173
Query: 61 ISGESGAGKTETTKFILQYLCSVTSNVSTW---------------VEQQILEANTILEAF 105
+GESGAGKTE TK ++QYL V S+ +E+Q+L+AN ILEAF
Sbjct: 174 CTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQGPSFSYGELEKQLLQANPILEAF 233
Query: 106 GNAKTVRNDNSSRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLV 165
GNAKTV+NDNSSRFGKF+++ FD I G I+ YLLE+SR Q+ ER +H+FY L+
Sbjct: 234 GNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKDERTFHIFYYLI 293
Query: 166 EAA 168
A
Sbjct: 294 AGA 296
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 192 VFAWLVNHINTCTNP-GQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYV 250
+F W++ +N + + FLG+LDI GFE F +NSFEQLCINYTNEKL + FNH +
Sbjct: 437 LFRWILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTM 496
Query: 251 FALEQE 256
F LEQE
Sbjct: 497 FILEQE 502
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 973
Score = 163 bits (413), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 115/183 (62%), Gaps = 15/183 (8%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G V +NPYK+L IY++ + Y G K PH++A+A+ AY S+ +QS +
Sbjct: 114 TYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYAIADTAYRSMLQDREDQSIL 173
Query: 61 ISGESGAGKTETTKFILQYLCSVTSNVSTW---------------VEQQILEANTILEAF 105
+GESGAGKTE TK ++QYL V S+ +E+Q+L+AN ILEAF
Sbjct: 174 CTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQGPSFSYGELEKQLLQANPILEAF 233
Query: 106 GNAKTVRNDNSSRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLV 165
GNAKTV+NDNSSRFGKF+++ FD I G I+ YLLE+SR Q+ ER +H+FY L+
Sbjct: 234 GNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKDERTFHIFYYLI 293
Query: 166 EAA 168
A
Sbjct: 294 AGA 296
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 192 VFAWLVNHINTCTNP-GQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYV 250
+F W++ +N + + FLG+LDI GFE F +NSFEQLCINYTNEKL + FNH +
Sbjct: 437 LFRWILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTM 496
Query: 251 FALEQE 256
F LEQE
Sbjct: 497 FILEQE 502
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|D Chain D, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 909
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 115/183 (62%), Gaps = 15/183 (8%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G V +NPYK+L IY++ + Y G K PH++A+A+ AY S+ +QS +
Sbjct: 114 TYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYAIADTAYRSMLQDREDQSIL 173
Query: 61 ISGESGAGKTETTKFILQYLCSVTSNVSTW---------------VEQQILEANTILEAF 105
+GESGAGKTE TK ++QYL V S+ +E+Q+L+AN ILEAF
Sbjct: 174 CTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQGPSFSYGELEKQLLQANPILEAF 233
Query: 106 GNAKTVRNDNSSRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLV 165
GNAKTV+NDNSSRFGKF+++ FD I G I+ YLLE+SR Q+ ER +H+FY L+
Sbjct: 234 GNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKDERTFHIFYYLI 293
Query: 166 EAA 168
A
Sbjct: 294 AGA 296
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 192 VFAWLVNHINTCTNP-GQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYV 250
+F W++ +N + + FLG+LDI GFE F +NSFEQLCINYTNEKL + FNH +
Sbjct: 437 LFRWILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTM 496
Query: 251 FALEQE 256
F LEQE
Sbjct: 497 FILEQE 502
>pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
pdb|4DB1|B Chain B, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
Length = 783
Score = 160 bits (406), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 108/175 (61%), Gaps = 10/175 (5%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G V VNPYK L +YT V Y G K PH+F++++ AY + NQS +
Sbjct: 116 TYSGLFCVTVNPYKWLPVYTPEVVAAYRGKKRSEAPPHIFSISDNAYQYMLTDRENQSIL 175
Query: 61 ISGESGAGKTETTKFILQYLCSVT----------SNVSTWVEQQILEANTILEAFGNAKT 110
I+GESGAGKT TK ++QY + S +E QI++AN LEAFGNAKT
Sbjct: 176 ITGESGAGKTVNTKRVIQYFAVIAAIGDRSKKDQSPGKGTLEDQIIQANPALEAFGNAKT 235
Query: 111 VRNDNSSRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLV 165
VRNDNSSRFGKF+++ F + I+ YLLE+SR+ FQ ER+YH+FYQ++
Sbjct: 236 VRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVIFQLKAERDYHIFYQIL 290
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 46/65 (70%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F W+V IN Q F+GVLDI GFE F NSFEQLCIN+TNEKL +FFNH++F
Sbjct: 435 MFNWMVTRINATLETKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMF 494
Query: 252 ALEQE 256
LEQE
Sbjct: 495 VLEQE 499
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|V Chain V, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 1184
Score = 159 bits (401), Expect = 2e-39, Method: Composition-based stats.
Identities = 84/183 (45%), Positives = 115/183 (62%), Gaps = 15/183 (8%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G V +NPYK+L IY++ + Y G K PH++A+A+ AY S+ +QS +
Sbjct: 114 TYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYAIADTAYRSMLQDREDQSIL 173
Query: 61 ISGESGAGKTETTKFILQYLCSVTSNVST---------------WVEQQILEANTILEAF 105
+GESGAGKTE TK ++QYL V S+ +E+Q+L+AN ILEAF
Sbjct: 174 CTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQGPSFSYGELEKQLLQANPILEAF 233
Query: 106 GNAKTVRNDNSSRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLV 165
GNAKTV+NDNSSRFGKF+++ FD I G I+ YLLE+SR Q+ ER +H+FY L+
Sbjct: 234 GNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKDERTFHIFYYLI 293
Query: 166 EAA 168
A
Sbjct: 294 AGA 296
Score = 79.0 bits (193), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/66 (54%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 192 VFAWLVNHINTCTNPGQ-DSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYV 250
+F W++ +N + + FLG+LDI GFE F +NSFEQLCINYTNEKL + FNH +
Sbjct: 437 LFRWILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTM 496
Query: 251 FALEQE 256
F LEQE
Sbjct: 497 FILEQE 502
>pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|S Chain S, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 840
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 107/176 (60%), Gaps = 11/176 (6%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G V VNPY L +Y V Y G K PH+F++++ AY + NQS +
Sbjct: 114 TYSGLFCVTVNPYXWLPVYNPXVVLAYRGKKRQEAPPHIFSISDNAYQFMLTDRENQSIL 173
Query: 61 ISGESGAGKTETTKFILQYLCSVTSN-----------VSTWVEQQILEANTILEAFGNAK 109
I+GESGAGKT T ++QY ++ ++ + +E QI+ AN +LEAFGNA
Sbjct: 174 ITGESGAGKTVNTXRVIQYFATIAASGEKKKEEQSGKMQGTLEDQIISANPLLEAFGNAX 233
Query: 110 TVRNDNSSRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLV 165
TVRNDNSSRFG F+++ F + I+ YLLE SR+TFQ P ER+YH+FYQ++
Sbjct: 234 TVRNDNSSRFGXFIRIHFGATGKLASADIETYLLEXSRVTFQLPAERSYHIFYQIM 289
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 46/65 (70%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F W+V IN + Q F+GVLDI GFE F NSFEQLCIN+TNE L +FFNH++F
Sbjct: 434 MFLWMVIRINQQLDTKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEXLQQFFNHHMF 493
Query: 252 ALEQE 256
LEQE
Sbjct: 494 VLEQE 498
>pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 843
Score = 154 bits (390), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 107/176 (60%), Gaps = 11/176 (6%)
Query: 1 TYTGTILVAVNPYKELDIYTQSKVCEYHGAKMGSQEPHVFALAEAAYSSLQNLDVNQSCV 60
TY+G V VNPY L +Y V Y G K PH+F++++ AY + NQS +
Sbjct: 117 TYSGLFCVTVNPYXWLPVYNPXVVLAYRGKKRQEAPPHIFSISDNAYQFMLTDRENQSIL 176
Query: 61 ISGESGAGKTETTKFILQYLCSVTSN-----------VSTWVEQQILEANTILEAFGNAK 109
I+GESGAGKT T ++QY ++ ++ + +E QI+ AN +LEAFGNA
Sbjct: 177 ITGESGAGKTVNTXRVIQYFATIAASGEKKKEEQSGKMQGTLEDQIISANPLLEAFGNAX 236
Query: 110 TVRNDNSSRFGKFMQVCFDPKWMIKGCIIQDYLLEQSRITFQSPGERNYHVFYQLV 165
TVRNDNSSRFG F+++ F + I+ YLLE SR+TFQ P ER+YH+FYQ++
Sbjct: 237 TVRNDNSSRFGXFIRIHFGATGKLASADIETYLLEXSRVTFQLPAERSYHIFYQIM 292
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 46/65 (70%)
Query: 192 VFAWLVNHINTCTNPGQDSTRFLGVLDIFGFENFAVNSFEQLCINYTNEKLHKFFNHYVF 251
+F W+V IN + Q F+GVLDI GFE F NSFEQLCIN+TNE L +FFNH++F
Sbjct: 437 MFLWMVIRINQQLDTKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEXLQQFFNHHMF 496
Query: 252 ALEQE 256
LEQE
Sbjct: 497 VLEQE 501
>pdb|3LBB|A Chain A, The Crystal Structure Of Smu.793 From Streptococcus Mutans
Ua159
pdb|3LBB|B Chain B, The Crystal Structure Of Smu.793 From Streptococcus Mutans
Ua159
pdb|3LBE|A Chain A, The Crystal Structure Of Smu.793 From Streptococcus Mutans
Ua159 Bound To Acetyl Coa
pdb|3LBE|B Chain B, The Crystal Structure Of Smu.793 From Streptococcus Mutans
Ua159 Bound To Acetyl Coa
pdb|3LBE|C Chain C, The Crystal Structure Of Smu.793 From Streptococcus Mutans
Ua159 Bound To Acetyl Coa
pdb|3LBE|D Chain D, The Crystal Structure Of Smu.793 From Streptococcus Mutans
Ua159 Bound To Acetyl Coa
Length = 163
Score = 27.7 bits (60), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 222 FENFAVNSFEQLCINYTNEKLHKFFNHYVFA 252
FENF + SFE+ + T E + K N+Y FA
Sbjct: 46 FENFDMVSFEKGHVIVTTEVVDKSLNYYGFA 76
>pdb|1I4Y|A Chain A, The Crystal Structure Of Phascolopsis Gouldii Wild Type
Methemerythrin
pdb|1I4Y|B Chain B, The Crystal Structure Of Phascolopsis Gouldii Wild Type
Methemerythrin
pdb|1I4Y|C Chain C, The Crystal Structure Of Phascolopsis Gouldii Wild Type
Methemerythrin
pdb|1I4Y|D Chain D, The Crystal Structure Of Phascolopsis Gouldii Wild Type
Methemerythrin
pdb|1I4Y|E Chain E, The Crystal Structure Of Phascolopsis Gouldii Wild Type
Methemerythrin
pdb|1I4Y|F Chain F, The Crystal Structure Of Phascolopsis Gouldii Wild Type
Methemerythrin
pdb|1I4Y|G Chain G, The Crystal Structure Of Phascolopsis Gouldii Wild Type
Methemerythrin
pdb|1I4Y|H Chain H, The Crystal Structure Of Phascolopsis Gouldii Wild Type
Methemerythrin
Length = 114
Score = 27.7 bits (60), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Query: 164 LVEAAQYS-----SSINKEIMHYTSEEKSHVIWVFAWLVNHINT 202
L++A+QY ++ +H K V W +WLVNHI T
Sbjct: 62 LMQASQYQFYDEHKKEHETFIHALDNWKGDVKWAKSWLVNHIKT 105
>pdb|1HRB|A Chain A, Atomic Models For The Polypeptide Backbones Of
Myohemerythrin And Hemerythrin
pdb|1HRB|B Chain B, Atomic Models For The Polypeptide Backbones Of
Myohemerythrin And Hemerythrin
Length = 113
Score = 27.3 bits (59), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Query: 164 LVEAAQYS--SSINKE---IMHYTSEEKSHVIWVFAWLVNHINT 202
L+EA+QY KE ++ K V W AWLVNHI T
Sbjct: 61 LMEASQYQFYDEHKKEHDGFINALDNWKGDVKWAKAWLVNHIKT 104
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.133 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,174,965
Number of Sequences: 62578
Number of extensions: 319978
Number of successful extensions: 1300
Number of sequences better than 100.0: 68
Number of HSP's better than 100.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1096
Number of HSP's gapped (non-prelim): 137
length of query: 276
length of database: 14,973,337
effective HSP length: 97
effective length of query: 179
effective length of database: 8,903,271
effective search space: 1593685509
effective search space used: 1593685509
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)