RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17388
(272 letters)
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS
kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 208
Score = 167 bits (423), Expect = 3e-52
Identities = 87/188 (46%), Positives = 123/188 (65%), Gaps = 7/188 (3%)
Query: 19 GQSNICLLFPGLSGAGKTSISFQIESYLIAQG-IPAYALDGDNLRNGINANLAFSEEDRN 77
Q + + GLS +GK++++ ++E L+ + AY LDGDN+R G+N +L FSE DRN
Sbjct: 21 NQRGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRFGLNKDLGFSEADRN 80
Query: 78 ENVRRAAECAKMFAECGFIALCSFVSPTAAARDRAREIH------RNANLEFFEVFVNTP 131
EN+RR AE AK+FA+ IA+ SF+SP RD AR++H L F EV+V+ P
Sbjct: 81 ENIRRIAEVAKLFADSNSIAITSFISPYRKDRDTARQLHEVATPGEETGLPFVEVYVDVP 140
Query: 132 VEICEQRDVKGHYKKAREGKIKSFTGVSQPYEAPKNPDLILETVNVPVEKCANSVLDMIA 191
VE+ EQRD KG YKKAREG IK FTG+S PYEAP NP++ ++ +PV+ ++D +
Sbjct: 141 VEVAEQRDPKGLYKKAREGVIKEFTGISAPYEAPANPEVHVKNYELPVQDAVKQIIDYLD 200
Query: 192 AKGLIPAR 199
KG +PA+
Sbjct: 201 TKGYLPAK 208
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS
kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 120 bits (301), Expect = 3e-34
Identities = 92/185 (49%), Positives = 126/185 (68%)
Query: 13 LRDFKEGQSNICLLFPGLSGAGKTSISFQIESYLIAQGIPAYALDGDNLRNGINANLAFS 72
+ + G + GLSGAGKT++S +E YL+ GIP Y LDGDN+R G+N NL FS
Sbjct: 10 VVGTRGGFRGCTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGFS 69
Query: 73 EEDRNENVRRAAECAKMFAECGFIALCSFVSPTAAARDRAREIHRNANLEFFEVFVNTPV 132
EDR ENVRR AE AK+FA+ G + + SF+SP R+ AR+IH A+L FFEVFV+ P+
Sbjct: 70 PEDREENVRRIAEVAKLFADAGLVCITSFISPYTQDRNNARQIHEGASLPFFEVFVDAPL 129
Query: 133 EICEQRDVKGHYKKAREGKIKSFTGVSQPYEAPKNPDLILETVNVPVEKCANSVLDMIAA 192
+CEQRDVKG YKKAR G+IK FTG+ YE P+ P+L+L+T + V C V++++
Sbjct: 130 HVCEQRDVKGLYKKARAGEIKGFTGIDSEYEKPEAPELVLKTDSCDVNDCVQQVVELLQE 189
Query: 193 KGLIP 197
+ ++P
Sbjct: 190 RDIVP 194
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 104 bits (258), Expect = 6e-28
Identities = 56/182 (30%), Positives = 94/182 (51%), Gaps = 2/182 (1%)
Query: 19 GQSNICLLFPGLSGAGKTSISFQIESYLIAQGIPAY-ALDGDNLRNGINANLAFSEEDRN 77
+ G +GK +I+ ++ L QG + L GD +R+ +++ L F+ EDR+
Sbjct: 3 ATQGFTIFLTGYMNSGKDAIARALQVTLNQQGGRSVSLLLGDTVRHELSSELGFTREDRH 62
Query: 78 ENVRRAAECAKMFAECGFIALCSFVSPTAAARDRAREIHRNANLEFFEVFVNTPVEICEQ 137
N++R A A G + + ++P +R AR+ A FF V V TP+E CEQ
Sbjct: 63 TNIQRIAFVATELTRAGAAVIAAPIAPYEESRKFARDAVSQAG-SFFLVHVATPLEHCEQ 121
Query: 138 RDVKGHYKKAREGKIKSFTGVSQPYEAPKNPDLILETVNVPVEKCANSVLDMIAAKGLIP 197
D +G Y AR G+IK FTGV PYE P+ DL+++ V + ++ ++ ++G +
Sbjct: 122 SDKRGIYAAARRGEIKGFTGVDDPYETPEKADLVVDFSKQSVRSIVHEIILVLESQGFLE 181
Query: 198 AR 199
+
Sbjct: 182 RQ 183
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 80.8 bits (198), Expect = 3e-19
Identities = 24/177 (13%), Positives = 51/177 (28%), Gaps = 17/177 (9%)
Query: 25 LLFPGLSGAGKTSISFQIESYLIAQGI----------PAYALDGDNLRNGINANLAFSEE 74
++ G S AGK+ I ++S L + + +A+ S
Sbjct: 6 IILNGGSSAGKSGIVRCLQSVLPEPWLAFGVDSLIEAMPLKMQSAEGGIEFDADGGVSIG 65
Query: 75 DRNENVRRAAECAKMFAECGFIALCSFVSPTAAARDRAREIHRNANLEFFEVFVNTPVEI 134
+ A + + A + R +L+ V V +
Sbjct: 66 PEFRALEGAWAEGVVAMARAGARIIIDDVFLGGAAAQERWRSFVGDLDVLWVGVRCDGAV 125
Query: 135 CEQRDVKGHYKKAREGKIKSFTGVSQP-YEAPKNPDLILETVNVPVEKCANSVLDMI 190
E R+ AR ++ D+ ++T + +CA ++ +
Sbjct: 126 AEGRE------TARGDRVAGMAAKQAYVVHEGVEYDVEVDTTHKESIECAWAIAAHV 176
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 73.4 bits (179), Expect = 1e-16
Identities = 28/176 (15%), Positives = 56/176 (31%), Gaps = 14/176 (7%)
Query: 25 LLFPGLSGAGKTSISFQIESYLIAQGIPAYALDGDNLRNGINA-----NLAFSEEDRNEN 79
LL G G+GK++I+ + + G+P D+L I L S +
Sbjct: 7 LLLSGHPGSGKSTIAEALANLP---GVPKVHFHSDDLWGYIKHGRIDPWLPQSHQQNRMI 63
Query: 80 VRRAAECAKMFAECGFIALCSFVSPTAAARDRAREIHRNANLEFFEVFVNTPVEICEQRD 139
++ AA+ A +A+ G+ + V + R + +E C R
Sbjct: 64 MQIAADVAGRYAKEGYFVILDGV-VRPDWLPAFTALARPLHYIVLRTTAAEAIERCLDRG 122
Query: 140 VKGHYKKAREGKIKSFTGVSQPYEAPKNPDLILETVNVPVEKCANSVLDMIAAKGL 195
+ S +E +L ++ S ++ + +
Sbjct: 123 GDSLSDPLVVADLHSQFADLGAFE-----HHVLPVSGKDTDQALQSAINALQSGRF 173
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 122
Score = 64.7 bits (158), Expect = 5e-14
Identities = 12/175 (6%), Positives = 34/175 (19%), Gaps = 64/175 (36%)
Query: 24 CLLFPGLSGAGKTSISFQIESYL--IAQGIPAYALDGDNLRNGINANLAFSEEDRNENVR 81
++ + +S + S G + +N
Sbjct: 8 SIVLGNSLTVSREQLSIALLSTFLQFGGGRYYKIFEHNNKT------------------- 48
Query: 82 RAAECAKMFAECGFIALCSFVSPTAAARDRAREIHRNANLEFFEVFVNTPVEICEQRDVK 141
E + ++ + + + +
Sbjct: 49 ----------ELLSLI---------------QDFIGSG--SGLIIPDQWEDDKDSVVGKQ 81
Query: 142 GHYKKAREGKIKSFTGVSQPYEAPKNPDLILETVNVPVEKCANSVLDMIAAKGLI 196
Y + + D+ LE+ + P+ V+ + G
Sbjct: 82 NVY----------------LLDTSSSADIQLESADEPISHIVQKVVLFLEDNGFF 120
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 63.5 bits (153), Expect = 6e-13
Identities = 30/177 (16%), Positives = 71/177 (40%), Gaps = 15/177 (8%)
Query: 19 GQSNICLLFPGLSGAGKTSISFQIESYLIAQGIPAYALDGDNLRNGINANLAFSEEDRNE 78
+ + G+SG+GK++++ ++ L A + L + + +++DR
Sbjct: 3 NHDHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKP 62
Query: 79 NVRRAAECAKMFAECGFIALCSFVSPTAAARDRAREIHRNANLEFFEVFVNTPVEICEQR 138
++ + A ++L + RD RE + N +++ ++ E R
Sbjct: 63 WLQALNDAAFAMQRTNKVSLIVCSALKKHYRDLLREGNPN----LSFIYLKGDFDVIESR 118
Query: 139 DVKGHYKKAREGKIKSFTGVSQPYEAPKNP-----DLILETVNVPVEKCANSVLDMI 190
KAR+G + +E + P D+++ ++ P+E S +++I
Sbjct: 119 ------LKARKGHFFKTQMLVTQFETLQEPGADETDVLVVDIDQPLEGVVASTIEVI 169
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 61.9 bits (149), Expect = 2e-12
Identities = 23/171 (13%), Positives = 49/171 (28%), Gaps = 7/171 (4%)
Query: 25 LLFPGLSGAGKTSISFQIESYLIAQGIPAYALDGDNLRNGINANLAFSEEDRNENVRRAA 84
L F SG GKT++ ++ L A+GI + + ++ S E R +
Sbjct: 5 LAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDKPGKDSYELRKAGAAQTI 64
Query: 85 ECAKMFAECGFIALCSFVSPTAAARDRAREIHRNANLEFFEVFVNTPVEICEQRDVKGHY 144
++ R + E F + + +
Sbjct: 65 VASQQRWALMTETPDEEELDLQFLASRMDTSKLDLI--LVEGFKHEEIAKIVLFRDGAGH 122
Query: 145 KKAREGKIKSFTGVSQPYEAPKN-PDLILETVNVPVEKCANSVLDMIAAKG 194
+ + V+ + L + VE A+ V++ + +
Sbjct: 123 RPEELVIDRHVIAVASDVPLNLDVALLDIND----VEGLADFVVEWMQKQN 169
>d1v47a1 b.122.1.3 (A:4-135) ATP sulfurylase N-terminal domain
{Thermus thermophilus [TaxId: 274]}
Length = 132
Score = 60.2 bits (146), Expect = 4e-12
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 207 LPRLDIGVIDLQWVQVIAEGWSSPLKGFMREDEFLKTIHFNTLDSNVNQSVAIVLAVTGE 266
LP L+IG + ++ +A G P+KGFM +E L H L + ++ I+L +
Sbjct: 2 LPALEIGEDERLDLENLATGAFFPVKGFMTREEALSVAHEMRLPTGEVWTIPILLQFREK 61
Query: 267 DK 268
+
Sbjct: 62 PR 63
>d1x6va1 b.122.1.3 (A:229-389) ATP sulfurylase N-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 161
Score = 60.3 bits (146), Expect = 6e-12
Identities = 39/70 (55%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
Query: 205 EALPRLDIGVIDLQWVQVIAEGWSSPLKGFMREDEFLKTIHFNTLDSN--VNQSVAIVLA 262
E LP L I +D+QWVQV+AEGW++PL GFMRE E+L+ +HF+ L +N SV IVL
Sbjct: 24 ETLPALKINKVDMQWVQVLAEGWATPLNGFMREREYLQCLHFDCLLDGGVINLSVPIVLT 83
Query: 263 VTGEDKQRLE 272
T EDK+RL+
Sbjct: 84 ATHEDKERLD 93
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 61.1 bits (147), Expect = 7e-12
Identities = 29/199 (14%), Positives = 56/199 (28%), Gaps = 33/199 (16%)
Query: 25 LLFPGLSGAGKTSISFQIESYLIAQGIPAYALDGDNLRNGINANLAFSEEDRNENVRRAA 84
++ GL GKT IS ++ YL G+P + R + E +N
Sbjct: 5 IVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVGQYRRDMVKTYKSFEFFLPDNEEGLK 64
Query: 85 ECAKMFAEC------------GFIALCSFVSPTAAARDRAREIHRNAN--LEFFEVFVNT 130
+ G +A+ + T R F E
Sbjct: 65 IRKQCALAALNDVRKFLSEEGGHVAVFDATNTTRERRAMIFNFGEQNGYKTFFVESICVD 124
Query: 131 PVEI----------------CEQRDVKGHYKKAREGKIKSFTGVSQPYEAPKNPDLILET 174
P I + + + + E S+ + + + + ++
Sbjct: 125 PEVIAANIVQVKLGSPDYVNRDSDEATEDFMRRIECYENSYESLDEEQDRDLS---YIKI 181
Query: 175 VNVPVEKCANSVLDMIAAK 193
++V N V D I ++
Sbjct: 182 MDVGQSYVVNRVADHIQSR 200
>d1g8fa1 b.122.1.3 (A:2-168) ATP sulfurylase N-terminal domain
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 167
Score = 60.0 bits (145), Expect = 9e-12
Identities = 13/66 (19%), Positives = 30/66 (45%)
Query: 207 LPRLDIGVIDLQWVQVIAEGWSSPLKGFMREDEFLKTIHFNTLDSNVNQSVAIVLAVTGE 266
+ ++ L +++I G SPL GF+ E+++ + + L ++ I L V
Sbjct: 31 ILVWNLTPRQLCDIELILNGGFSPLTGFLNENDYSSVVTDSRLADGTLWTIPITLDVDEA 90
Query: 267 DKQRLE 272
+++
Sbjct: 91 FANQIK 96
>d1m8pa1 b.122.1.3 (A:1-170) ATP sulfurylase N-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 170
Score = 60.0 bits (145), Expect = 9e-12
Identities = 18/68 (26%), Positives = 31/68 (45%)
Query: 204 IEALPRLDIGVIDLQWVQVIAEGWSSPLKGFMREDEFLKTIHFNTLDSNVNQSVAIVLAV 263
E+LP + + L +++I G SPL+GFM + ++ + N L S+ I L
Sbjct: 28 AESLPAVTLTERQLCDLELIMNGGFSPLEGFMNQADYDRVCEDNRLADGNVFSMPITLDA 87
Query: 264 TGEDKQRL 271
+ E
Sbjct: 88 SQEVIDEK 95
>d1jhda1 b.122.1.3 (A:1-173) ATP sulfurylase N-terminal domain
{Sulfur-oxidizing endosymbiont of Riftia pachyptila
[TaxId: 35843]}
Length = 173
Score = 55.4 bits (133), Expect = 4e-10
Identities = 15/65 (23%), Positives = 26/65 (40%)
Query: 204 IEALPRLDIGVIDLQWVQVIAEGWSSPLKGFMREDEFLKTIHFNTLDSNVNQSVAIVLAV 263
E+LP + I ++ G+ SPL+GFM + + TL V ++ +
Sbjct: 28 AESLPSVVISSQAAGNAVMMGAGYFSPLQGFMNVADAMGAAEKMTLSDGSFFPVPVLCLL 87
Query: 264 TGEDK 268
D
Sbjct: 88 ENTDA 92
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 53.5 bits (127), Expect = 2e-09
Identities = 21/172 (12%), Positives = 53/172 (30%), Gaps = 10/172 (5%)
Query: 29 GLSGAGKTSISFQIESYLIAQGIPAYALDGDNLRNGINANLAFSEEDRNE---NVRRAAE 85
G +G GK++ ++ + L ++GD + + + E + +
Sbjct: 9 GPAGVGKSTTCKRLAAQLDNSAY----IEGDIINHMVVGGYRPPWESDELLALTWKNITD 64
Query: 86 CAKMFAECGFIALCSFVSPTAAARD-RAREIHRNANLEFFEVFVNTPVEICEQRDVKGHY 144
F + +++ A + ++E + + T E +RD
Sbjct: 65 LTVNFLLAQNDVVLDYIAFPDEAEALAQTVQAKVDDVEIRFIILWTNREELLRRDAL--R 122
Query: 145 KKAREGKIKSFTGVSQPYEAPKNPDLILETVNVPVEKCANSVLDMIAAKGLI 196
KK + + V + + T ++ + V ++ I
Sbjct: 123 KKDEQMGERCLELVEEFESKGIDERYFYNTSHLQPTNLNDIVKNLKTNPRFI 174
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 51.7 bits (122), Expect = 8e-09
Identities = 26/174 (14%), Positives = 56/174 (32%), Gaps = 14/174 (8%)
Query: 22 NICLLFPGLSGAGKTSISFQIESYLIAQGIPAYALDGDNLRNGINANLAFSEEDRNENVR 81
NI L+ G GAGK++I Q+ L + Y D + + + + E R
Sbjct: 4 NIFLV--GPMGAGKSTIGRQLAQQL---NMEFYDSDQEIEKRTGADVGWVFDLEGEEGFR 58
Query: 82 RAAECAKMFAECGFIALCSFVSPTAAARDRAREIHRNANLEFFEVFVNTPVEICEQRDVK 141
E + + + +R+ + V++ T +E R +
Sbjct: 59 DREEKVINELTEKQGIVLATGGGSVKSRETRNRLSAR----GVVVYLETTIEKQLARTQR 114
Query: 142 GHYKKAREGKIKSFTGVSQPYEA-----PKNPDLILETVNVPVEKCANSVLDMI 190
+ + + + D+ + T + + AN ++ M+
Sbjct: 115 DKKRPLLHVETPPREVLEALANERNPLYEEIADVTIRTDDQSAKVVANQIIHML 168
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 42.4 bits (98), Expect = 1e-05
Identities = 21/138 (15%), Positives = 42/138 (30%), Gaps = 12/138 (8%)
Query: 25 LLFPGLSGAGKTSISFQIESYLIAQGIPAYALDGDNLRNGINANLAFSEEDRN------- 77
+L G G+GK++ + IA+ Y ++ D+ R I A+ E
Sbjct: 5 ILTIGCPGSGKSTWA----REFIAKNPGFYNINRDDYRQSIMAHEERDEYKYTKKKEGIV 60
Query: 78 -ENVRRAAECAKMFAECGFIALCSFVSPTAAARDRAREIHRNANLEFFEVFVNTPVEICE 136
A+ + + S + R + + + P
Sbjct: 61 TGMQFDTAKSILYGGDSVKGVIISDTNLNPERRLAWETFAKEYGWKVEHKVFDVPWTELV 120
Query: 137 QRDVKGHYKKAREGKIKS 154
+R+ K K ++S
Sbjct: 121 KRNSKRGTKAVPIDVLRS 138
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 41.2 bits (95), Expect = 4e-05
Identities = 24/190 (12%), Positives = 52/190 (27%), Gaps = 26/190 (13%)
Query: 26 LFPGLSGAGKTSISFQIESYLIAQGIPAYALD-GDNLRNGINANLAFSEEDRN------- 77
+ G+ G GK+++ +++ L QGI ++ GD + + D
Sbjct: 5 IVTGIPGVGKSTVLAKVKEILDNQGINNKIINYGDFMLATALKLGYAKDRDEMRKLSVEK 64
Query: 78 ------ENVRRAAECAKMFAECGFIALC--SFVSPTAAARDRAREIHRNANLEFFEVFVN 129
+ + AE A+ E +P+ + N +
Sbjct: 65 QKKLQIDAAKGIAEEARAGGEGYLFIDTHAVIRTPSGYLPGLPSYVITEINPSVIFLLEA 124
Query: 130 TPVEICEQR---------DVKGHYKKAREGKIKSFTGVSQPYEAPKNPDLILETVNVPVE 180
P I ++ D + + A ++ V
Sbjct: 125 DPKIILSRQKRDTTRNRNDYSDESVILETINFARYAATASAVLAGS-TVKVIVNVEGDPS 183
Query: 181 KCANSVLDMI 190
AN ++ +
Sbjct: 184 IAANEIIRSM 193
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 33.7 bits (76), Expect = 0.011
Identities = 18/156 (11%), Positives = 41/156 (26%), Gaps = 23/156 (14%)
Query: 25 LLFPGLSGAGKTSISFQIESYLIAQGIPAYALDGDNLRNGINANLAFSEEDRNENVRRAA 84
++ G GAGK++ + D + +R
Sbjct: 17 VVAVGFPGAGKSTFIQEHLVSA---------------------GYVHVNRDTLGSWQRCV 55
Query: 85 ECAKMFAECGFIALCSFVSPTAAARDRAREIHRNANLEFFEVFVNTPVEICEQRDVKGHY 144
+ G + +P +R R + ++A + +E +
Sbjct: 56 SSCQAALRQGKRVVIDNTNPDVPSRARYIQCAKDAGVPCRCFNFCATIEQARHNNRFREM 115
Query: 145 KKAREGKI--KSFTGVSQPYEAPKNPDLILETVNVP 178
+ + +E P + LE + +P
Sbjct: 116 TDPSHAPVSDMVMFSYRKQFEPPTLAEGFLEILEIP 151
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 32.6 bits (73), Expect = 0.032
Identities = 21/185 (11%), Positives = 53/185 (28%), Gaps = 20/185 (10%)
Query: 26 LFPGLSGAGKTSISFQIESYLIAQGIPAYALDGDNLRNGINANLA-------FSEEDRNE 78
+ G+ G G T+ S L +G+ + ++ + + D
Sbjct: 5 VVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVSFGSVMFEVAKEENLVSDRDQMRKMDPET 64
Query: 79 NVRRAAECAKMFAECGFIALC------SFVSPTAAARDRAREIHRNANLEFFEVFVNTPV 132
R + AE + + +P + N + V T
Sbjct: 65 QKRIQKMAGRKIAEMAKESPVAVDTHSTVSTPKGYLPGLPSWVLNELNPDLIIVVETTGD 124
Query: 133 EICEQRDVKGHYKKAREG--KIKSFTGVSQPY-----EAPKNPDLILETVNVPVEKCANS 185
EI +R + + I+ +++ I++ N +++
Sbjct: 125 EILMRRMSDETRVRDLDTASTIEQHQFMNRCAAMSYGVLTGATVKIVQNRNGLLDQAVEE 184
Query: 186 VLDMI 190
+ +++
Sbjct: 185 LTNVL 189
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium
discoideum, class-I myosin MyoE [TaxId: 44689]}
Length = 684
Score = 33.1 bits (75), Expect = 0.038
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 13 LRDFKEGQSNICLLFPGLSGAGKTSISFQIESYLIAQG 50
R ++ Q N C++ G SGAGKT S +I +L
Sbjct: 77 YRSMRQSQENQCVIISGESGAGKTEASKKIMQFLTFVS 114
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken
(Gallus gallus), Va isoform [TaxId: 9031]}
Length = 730
Score = 32.8 bits (74), Expect = 0.046
Identities = 9/36 (25%), Positives = 14/36 (38%)
Query: 13 LRDFKEGQSNICLLFPGLSGAGKTSISFQIESYLIA 48
+ + N ++ G SGAGKT + Y
Sbjct: 85 YKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFAT 120
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter
sphaeroides [TaxId: 1063]}
Length = 288
Score = 31.4 bits (71), Expect = 0.10
Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Query: 29 GLSGAGKTSISFQIESYLIAQGIPAYALDGDN----LRNGINANLAFSEEDRNENV 80
G SGAG +++ + +G+ A +++GD R + A L +
Sbjct: 11 GSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAFHRFNRADMKAELDRRYAAGDATF 66
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 30.3 bits (67), Expect = 0.13
Identities = 22/170 (12%), Positives = 45/170 (26%), Gaps = 8/170 (4%)
Query: 22 NICLLFPGLSGAGKTSISFQIESYLIAQGIPAYALDGDNLRNGINANLAFSEEDRNENVR 81
L+ GL G+GK++I ++ L G+ D + + D + R
Sbjct: 3 KAVLV--GLPGSGKSTIGRRLAKAL---GVGLLDTDVAIEQRTGRSIADIFATDGEQEFR 57
Query: 82 RAAECAKMFAECGFIALCSFVSPTAAARDRAREIHRNANLEFFEVFVNTPVEICEQRDVK 141
R E A + S + + + +
Sbjct: 58 RIEEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRP 117
Query: 142 GHYKKAREGKIKSFTGVSQP-YEAPKNPDLILETVNVPVEKCANSVLDMI 190
R K ++ P Y + + ++T +L +
Sbjct: 118 LLAGPDRAEKYRALMAKRAPLYR--RVATMRVDTNRRNPGAVVRHILSRL 165
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain
{Dictyostelium discoideum [TaxId: 44689]}
Length = 712
Score = 31.2 bits (70), Expect = 0.13
Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 10/123 (8%)
Query: 13 LRDFKEGQSNICLLFPGLSGAGKTSISFQIESYLIAQGIPAYALDGDNLRNGINAN---- 68
R + + N LL G SGAGKT + ++ YL + A L I
Sbjct: 116 YRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPIL 175
Query: 69 --LAFSEEDRNENVRRAAECAKM-FAECGFIALCSFVSPTAAARDRAREIHRNANLEFFE 125
++ RN N R + ++ F GFI+ S S +++R + ++ +
Sbjct: 176 EAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLL---EKSRVVFQSETERNYH 232
Query: 126 VFV 128
+F
Sbjct: 233 IFY 235
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken
(Gallus gallus), pectoral muscle [TaxId: 9031]}
Length = 710
Score = 30.9 bits (69), Expect = 0.16
Identities = 23/133 (17%), Positives = 47/133 (35%), Gaps = 21/133 (15%)
Query: 13 LRDFKEGQSNICLLFPGLSGAGKTSISFQIESYLIAQGIPAYALDGDNLRNGINANLAFS 72
R + + + +L G SGAGKT + ++ YL ++ G + +
Sbjct: 82 YRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQGPSFSYGEL 141
Query: 73 EE-----------------DRNENVRRAAECAK-MFAECGFIALCSFVSPTAAARDRARE 114
E+ +N+N R + + F G+I + +++R
Sbjct: 142 EKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANI---ETYLLEKSRA 198
Query: 115 IHRNANLEFFEVF 127
I + + F +F
Sbjct: 199 IRQAKDERTFHIF 211
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni
[TaxId: 197]}
Length = 161
Score = 29.9 bits (66), Expect = 0.19
Identities = 23/174 (13%), Positives = 50/174 (28%), Gaps = 20/174 (11%)
Query: 22 NICLLFPGLSGAGKTSISFQIESYLIAQGIPAYALDGDNLRNGINANLAFSEEDRNENVR 81
NI + G G+GK++++ + L + D + E+ R
Sbjct: 2 NIVFI--GFMGSGKSTLARALAKDL---DLVFLDSDFLIEQKFNQKVSEIFEQKR----- 51
Query: 82 RAAECAKMFAECGFIALCSFVSPTAAARDRAREIHRNANLEFFEVFVNTPVEICEQRDVK 141
E E S A N F +++ E ++R
Sbjct: 52 ---ENFFREQEQKMADFFSSCEKACIATGGGFVNVSNLEKAGFCIYLKADFEYLKKR--L 106
Query: 142 GHYKKAREGKIKSFTGVSQPYEA-----PKNPDLILETVNVPVEKCANSVLDMI 190
+ ++ + Y + + IL N +++ + + +I
Sbjct: 107 DKDEISKRPLFYDEIKAKKLYNERLSKYEQKANFILNIENKNIDELLSEIKKVI 160
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken
(Gallus gallus), pectoral muscle [TaxId: 9031]}
Length = 794
Score = 30.8 bits (69), Expect = 0.21
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 14 RDFKEGQSNICLLFPGLSGAGKTSISFQIESYLIA 48
+ + N +L G SGAGKT + ++ Y
Sbjct: 115 QFMLTDRENQSILITGESGAGKTVNTKRVIQYFAT 149
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay
scallop (Aequipecten irradians) [TaxId: 31199]}
Length = 789
Score = 30.8 bits (69), Expect = 0.21
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 13 LRDFKEGQSNICLLFPGLSGAGKTSISFQIESYLIAQG 50
++ + N L G SGAGKT + ++ YL
Sbjct: 112 YQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVA 149
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP)
carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus
thermophilus [TaxId: 274]}
Length = 318
Score = 29.6 bits (66), Expect = 0.44
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 26 LFPGLSGAGKTSISFQIESYLIAQ 49
+F GLSG GKT++S E LI
Sbjct: 18 VFFGLSGTGKTTLSTDPERPLIGD 41
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major
[TaxId: 5664]}
Length = 174
Score = 28.8 bits (63), Expect = 0.51
Identities = 25/169 (14%), Positives = 51/169 (30%), Gaps = 8/169 (4%)
Query: 22 NICLLFPGLSGAGKTSISFQIESYLIAQGIPAYALDGDNLRNGINANLAFSEEDRNENVR 81
NI + G G GKTS++ I + L L+ L + + E +
Sbjct: 7 NILIT--GTPGTGKTSMAEMIAAELDGFQH----LEVGKLVKENHFYTEYDTELDTHIIE 60
Query: 82 RAAECAKMFAECGFIALCSFVSPTAAARDRAREIHRNANLEFFEVFVNTPVEICEQRDVK 141
E + + + + E + + E +R
Sbjct: 61 EKDEDRLLDFMEPIMVSRGNHVVDYHSSELFPERWFHMVV-VLHTSTEVLFERLTKRQYS 119
Query: 142 GHYKKAREGKIKSFTGVSQPYEAPKNPDLILETVNVPVEKCANSVLDMI 190
K+A + + + D++L N +E+ A +V ++
Sbjct: 120 -EAKRAENMEAEIQCICEEEARDAYEDDIVLVRENDTLEQMAATVEEIR 167
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP)
carboxykinase (ATP-oxaloacetate carboxy-lyase)
{Trypanosoma cruzi [TaxId: 5693]}
Length = 323
Score = 29.2 bits (65), Expect = 0.52
Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 13/59 (22%)
Query: 5 CNEGKESWLRDFKEGQSNICLLFPGLSGAGKTSISFQIESYLIAQGIPAYALDGDNLRN 63
N GK+ ++ + F GLSG GKT++S LI + + N
Sbjct: 8 ANVGKQG----------DVTVFF-GLSGTGKTTLSADPHRNLIGD--DEHVWTDRGVFN 53
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 28.6 bits (63), Expect = 0.67
Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 25 LLFPGLSGAGKTSI--SFQIESYLIAQGIPAYALDGDNLR 62
LL G +GK++I +I ++ GI D +
Sbjct: 9 LLLLGAGESGKSTIVKQMRILHVVLTSGIFETKFQVDKVN 48
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli
[TaxId: 562]}
Length = 210
Score = 28.4 bits (62), Expect = 0.69
Identities = 17/71 (23%), Positives = 25/71 (35%), Gaps = 4/71 (5%)
Query: 27 FPGLSGAGKTSISFQIESYLIAQGIPAYAL----DGDNLRNGINANLAFSEEDRNENVRR 82
GL GAGKT+ + L GI G L + + L + +E +
Sbjct: 7 IEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLLLDIKSVGDEVITD 66
Query: 83 AAECAKMFAEC 93
AE +A
Sbjct: 67 KAEVLMFYAAR 77
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain
{Staphylococcus xylosus [TaxId: 1288]}
Length = 169
Score = 28.0 bits (62), Expect = 0.75
Identities = 13/64 (20%), Positives = 22/64 (34%), Gaps = 12/64 (18%)
Query: 22 NICLLFPGLSGAGKTSISFQIESYLIAQG--------IPAYALDGDNLRNGINANLAFSE 73
+ +L G SG GK+ + + LI +G + + D L +
Sbjct: 15 GVGVLITGDSGIGKSETALE----LIKRGHRLVADDNVEIREISKDELIGRAPKLIEHLL 70
Query: 74 EDRN 77
E R
Sbjct: 71 EIRG 74
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP)
carboxykinase (ATP-oxaloacetate carboxy-lyase)
{Escherichia coli [TaxId: 562]}
Length = 313
Score = 28.5 bits (63), Expect = 0.77
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 26 LFPGLSGAGKTSISFQIESYLI 47
+F GLSG GKT++S + LI
Sbjct: 18 VFFGLSGTGKTTLSTDPKRRLI 39
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 28.2 bits (61), Expect = 1.1
Identities = 17/95 (17%), Positives = 32/95 (33%), Gaps = 2/95 (2%)
Query: 8 GKESWLRDFKEGQSNICLLFPGLSGAGKTSISFQIESYLIAQGIPAYALDGDNLRNGINA 67
+E + K ++ I L+ GL GK+SI + L I +
Sbjct: 16 DREKEIEKLKGLRAPITLVL-GLRRTGKSSIIKIGINELNLPYIYLDLRKFEERNYISYK 74
Query: 68 NLAFS-EEDRNENVRRAAECAKMFAECGFIALCSF 101
+ +++ N+ V+R K I +
Sbjct: 75 DFLLELQKEINKLVKRLPSLLKALKNIQGIVIMGN 109
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 28.1 bits (61), Expect = 1.2
Identities = 16/231 (6%), Positives = 52/231 (22%), Gaps = 17/231 (7%)
Query: 27 FPGLSGAGKTSISFQIESYLIAQGIPAYALDGDNLRNGINANLAFSEEDRNENVRRAAEC 86
G GK++ + + + A + + +
Sbjct: 7 IEGNIAVGKSTFVKLLTKTYPEWHVATEPVATWQNIQAAGNQKACTAQSLGNLLDMMYRE 66
Query: 87 AKMFAECGFIALCSFVSPTAAARDRAREIHRNANLEFFEVFVNTPVEICEQRDVKGHYKK 146
++ + + + V + ++ + +
Sbjct: 67 PARWSYTFQTFSF-----LSRLKVQLEPFPEKLLQARKPVQIFERSVYSDRYIFAKNLFE 121
Query: 147 AREGKIKSFTGVSQPYEAPKNPDLILETVNVPVEKCANSVLDMIAAKGLIPARQFFFIEA 206
+ + T++ + A+ P +
Sbjct: 122 NGSLSDIEWHIYQDWHSFLLWEFASRITLHGFIYLQAS------------PQVCLKRLYQ 169
Query: 207 LPRLDIGVIDLQWVQVIAEGWSSPLKGFMREDEFLKTIHFNTLDSNVNQSV 257
R + I+L +++ + + L + F ++ L +VN
Sbjct: 170 RAREEEKGIELAYLEQLHGQHEAWLIHKTTKLHFEALMNIPVLVLDVNDDF 220
>d1kjsa_ a.50.1.1 (A:) C5a anaphylotoxin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 74
Score = 25.9 bits (57), Expect = 1.6
Identities = 9/30 (30%), Positives = 11/30 (36%)
Query: 64 GINANLAFSEEDRNENVRRAAECAKMFAEC 93
G N + E R + C K F EC
Sbjct: 25 GACVNNDETCEQRAARISLGPRCIKAFTEC 54
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 27.2 bits (59), Expect = 1.8
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 27 FPGLSGAGKTSISFQIESYLIAQGIPA 53
G+ AGK++ S ++ L A G A
Sbjct: 8 LEGVDRAGKSTQSRKLVEALCAAGHRA 34
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 27.0 bits (58), Expect = 2.1
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 11 SWLRDFKEGQSNICLLFPGLSGAGKTSISFQI 42
S L+ + L+F GL AGKT++ +
Sbjct: 2 SVLQFLGLYKKTGKLVFLGLDNAGKTTLLHML 33
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 26.8 bits (58), Expect = 2.4
Identities = 21/175 (12%), Positives = 43/175 (24%), Gaps = 22/175 (12%)
Query: 22 NICLLFPGLSGAGKTSISFQIESYLIAQGIPAYALDGDNLRNGINANLAFSEEDRNENVR 81
NI L G G GKT++ ++ S G+ + + + +
Sbjct: 6 NILLT--GTPGVGKTTLGKELASKS---GLKYINVGDLAREEQLYDGYDEEYDCPILDED 60
Query: 82 RAAECAKMFAECGFIALCSFVSPTAAARDRAREIHRNANLEFFEVFVNTPVEICEQRDVK 141
R + G + + + T + +R
Sbjct: 61 RVVDELDNQMREGGVIVDYHGC-----------DFFPERWFHIVFVLRTDTNVLYERLET 109
Query: 142 GHYKKAREGKIKSFTGVSQPYEA-----PKNPDLILETVNVP-VEKCANSVLDMI 190
Y + + YE + L + +E + +L I
Sbjct: 110 RGYNEKKLTDNIQCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVDQILKWI 164
>d1c5aa_ a.50.1.1 (A:) C5a anaphylotoxin {Pig (Sus scrofa
domestica) [TaxId: 9823]}
Length = 66
Score = 25.2 bits (55), Expect = 2.7
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 64 GINANLAFSEEDRNENVRRAAECAKMFAEC 93
G N + E+R ++ +C K F +C
Sbjct: 25 GAYRNDDETCEERAARIKIGPKCVKAFKDC 54
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 26.5 bits (57), Expect = 2.9
Identities = 13/56 (23%), Positives = 21/56 (37%)
Query: 16 FKEGQSNICLLFPGLSGAGKTSISFQIESYLIAQGIPAYALDGDNLRNGINANLAF 71
+ EG +L G G+GKT+ E Y + ++ NG+N
Sbjct: 3 YAEGTQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRNVNGVNLLELM 58
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 26.3 bits (56), Expect = 3.3
Identities = 14/65 (21%), Positives = 24/65 (36%)
Query: 29 GLSGAGKTSISFQIESYLIAQGIPAYALDGDNLRNGINANLAFSEEDRNENVRRAAECAK 88
GLS +GKT+++ Q+ L QGI D+ E+ E +
Sbjct: 29 GLSRSGKTTLANQLSQTLREQGISVCVFHMDDHIVERAKRYHTGNEEWFEYYYLQWDVEW 88
Query: 89 MFAEC 93
+ +
Sbjct: 89 LTHQL 93
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 26.2 bits (56), Expect = 4.0
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 27 FPGLSGAGKTSISFQIESYLIAQGIPA 53
G+ GAGK ++ ++ A G
Sbjct: 5 IEGVDGAGKRTLVEKLSGAFRAAGRSV 31
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 26.0 bits (56), Expect = 4.2
Identities = 4/14 (28%), Positives = 8/14 (57%)
Query: 25 LLFPGLSGAGKTSI 38
+L G +GK++
Sbjct: 5 ILLLGAGESGKSTF 18
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain
{Mycoplasma pneumoniae [TaxId: 2104]}
Length = 177
Score = 25.7 bits (56), Expect = 4.5
Identities = 8/29 (27%), Positives = 13/29 (44%), Gaps = 4/29 (13%)
Query: 22 NICLLFPGLSGAGKTSISFQIESYLIAQG 50
+ +L G SG GK+ + LI +
Sbjct: 15 GVGVLLTGRSGIGKSECALD----LINKN 39
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 26.1 bits (56), Expect = 4.5
Identities = 7/25 (28%), Positives = 12/25 (48%), Gaps = 7/25 (28%)
Query: 14 RDFKEGQSNICLLFPGLSGAGKTSI 38
R+ K + LL G +GK++
Sbjct: 1 RELK-----LLLL--GTGESGKSTF 18
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain
{Lactobacillus casei [TaxId: 1582]}
Length = 176
Score = 25.6 bits (56), Expect = 5.2
Identities = 8/29 (27%), Positives = 15/29 (51%), Gaps = 4/29 (13%)
Query: 22 NICLLFPGLSGAGKTSISFQIESYLIAQG 50
+ +L G SG GK+ + + L+ +G
Sbjct: 14 GLGVLITGDSGVGKSETALE----LVQRG 38
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 25.7 bits (55), Expect = 5.2
Identities = 7/26 (26%), Positives = 15/26 (57%), Gaps = 7/26 (26%)
Query: 13 LRDFKEGQSNICLLFPGLSGAGKTSI 38
+R++K + +L G G GK+++
Sbjct: 1 MREYK-----VVVL--GSGGVGKSAL 19
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 25.7 bits (55), Expect = 5.5
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 25 LLFPGLSGAGKTSI 38
LL G +GK++I
Sbjct: 5 LLLLGAGESGKSTI 18
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 25.7 bits (55), Expect = 5.6
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 19 GQSNICLLFPGLSGAGKTSISFQI 42
G + +L GL AGKT+I +++
Sbjct: 9 GNKEMRILMLGLDAAGKTTILYKL 32
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 25.7 bits (55), Expect = 5.7
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 11 SWLRDFKEGQS-NICLLFPGLSGAGKTSI 38
S LR K + +L GL AGKT++
Sbjct: 4 SILRKLKSAPDQEVRILLLGLDNAGKTTL 32
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 25.4 bits (54), Expect = 6.2
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 7/26 (26%)
Query: 13 LRDFKEGQSNICLLFPGLSGAGKTSI 38
LR+ K +CLL G +G GK+SI
Sbjct: 2 LRELK-----VCLL--GDTGVGKSSI 20
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 25.3 bits (54), Expect = 6.8
Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 7/138 (5%)
Query: 25 LLFPGLSGAGKTSISFQ------IESYLIAQGIPAYALDGDNLRNGINANLAFSEEDRNE 78
++ G G GK++++ Q +E Y + + L + ++
Sbjct: 7 VIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYA 66
Query: 79 NVRRA-AECAKMFAECGFIALCSFVSPTAAARDRAREIHRNANLEFFEVFVNTPVEICEQ 137
+R + F I + TA R++ + + N+ F V + +E Q
Sbjct: 67 AIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDKRQ 126
Query: 138 RDVKGHYKKAREGKIKSF 155
V+ +A + +
Sbjct: 127 VSVEEAKNRADQWNVNYV 144
>d1flca1 b.19.1.3 (A:151-306) Hemagglutinin domain of
haemagglutinin-esterase-fusion glycoprotein HEF1
{Influenza C virus [TaxId: 11552]}
Length = 156
Score = 25.0 bits (54), Expect = 7.0
Identities = 8/23 (34%), Positives = 9/23 (39%)
Query: 165 PKNPDLILETVNVPVEKCANSVL 187
KNP L + V KC L
Sbjct: 29 LKNPALYTQEVKPSENKCGKENL 51
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia
chrysanthemi [TaxId: 556]}
Length = 170
Score = 24.9 bits (53), Expect = 8.1
Identities = 6/25 (24%), Positives = 12/25 (48%), Gaps = 2/25 (8%)
Query: 22 NICLLFPGLSGAGKTSISFQIESYL 46
I ++ G G G T++ ++ L
Sbjct: 4 PIFMV--GARGCGMTTVGRELARAL 26
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 24.9 bits (53), Expect = 8.3
Identities = 7/26 (26%), Positives = 15/26 (57%), Gaps = 7/26 (26%)
Query: 13 LRDFKEGQSNICLLFPGLSGAGKTSI 38
+R++K + +L G G GK+++
Sbjct: 1 MREYK-----LVVL--GSGGVGKSAL 19
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 25.0 bits (53), Expect = 8.9
Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 7/25 (28%)
Query: 14 RDFKEGQSNICLLFPGLSGAGKTSI 38
R+ + + +L GL AGKT+I
Sbjct: 1 RELR-----LLML--GLDNAGKTTI 18
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 24.9 bits (53), Expect = 9.4
Identities = 6/25 (24%), Positives = 8/25 (32%)
Query: 27 FPGLSGAGKTSISFQIESYLIAQGI 51
GL GKT+ + L
Sbjct: 8 IEGLDRTGKTTQCNILYKKLQPNCK 32
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.136 0.400
Gapped
Lambda K H
0.267 0.0449 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,009,496
Number of extensions: 46271
Number of successful extensions: 273
Number of sequences better than 10.0: 1
Number of HSP's gapped: 268
Number of HSP's successfully gapped: 70
Length of query: 272
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 188
Effective length of database: 1,254,276
Effective search space: 235803888
Effective search space used: 235803888
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.5 bits)