Query psy17389
Match_columns 259
No_of_seqs 305 out of 1755
Neff 7.4
Searched_HMMs 29240
Date Fri Aug 16 21:12:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17389.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17389hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hy3_A 5-formyltetrahydrofolat 100.0 2.9E-49 1E-53 338.0 13.8 167 71-258 32-201 (203)
2 1ydm_A Hypothetical protein YQ 100.0 6.4E-47 2.2E-51 319.6 11.0 158 70-258 23-182 (187)
3 2jcb_A 5-formyltetrahydrofolat 100.0 2E-46 6.7E-51 319.7 9.7 157 71-258 35-193 (200)
4 1sou_A 5,10-methenyltetrahydro 100.0 5.8E-46 2E-50 315.4 9.4 155 70-258 24-178 (194)
5 1wkc_A HB8 TT1367 protein; str 100.0 2.4E-44 8.3E-49 303.1 9.3 148 71-258 22-169 (184)
6 1sbq_A H91_ORF164, 5,10-methen 100.0 3.9E-41 1.3E-45 284.4 10.4 138 70-256 49-189 (189)
7 3hy3_A 5-formyltetrahydrofolat 99.6 6.8E-17 2.3E-21 137.5 4.0 94 3-98 80-178 (203)
8 1sou_A 5,10-methenyltetrahydro 99.6 1.3E-15 4.5E-20 128.6 4.5 85 3-99 72-156 (194)
9 1ydm_A Hypothetical protein YQ 99.5 1.3E-15 4.5E-20 127.9 1.9 86 3-98 72-159 (187)
10 2jcb_A 5-formyltetrahydrofolat 99.5 1.9E-15 6.6E-20 128.2 2.6 86 3-98 83-170 (200)
11 1wkc_A HB8 TT1367 protein; str 99.5 1.1E-14 3.7E-19 122.1 3.6 80 3-98 67-146 (184)
12 1sbq_A H91_ORF164, 5,10-methen 98.9 4.5E-10 1.5E-14 94.2 3.1 49 47-98 121-169 (189)
13 3rrl_A Succinyl-COA:3-ketoacid 53.5 20 0.00068 30.2 5.4 64 185-255 150-219 (235)
14 3cdk_A Succinyl-COA:3-ketoacid 45.8 26 0.00089 29.5 4.9 62 186-254 151-218 (241)
15 1k6d_A Acetate COA-transferase 35.4 25 0.00085 29.0 3.1 65 186-257 148-218 (220)
16 4g85_A Histidine-tRNA ligase, 20.5 38 0.0013 31.5 1.8 51 205-255 368-426 (517)
17 4g84_A Histidine--tRNA ligase, 20.3 53 0.0018 29.8 2.7 52 205-256 315-374 (464)
No 1
>3hy3_A 5-formyltetrahydrofolate cyclo-ligase; antifolate, cancer, ATP-binding, binding, magnesium, nucleotide-binding; HET: 10F; 1.80A {Homo sapiens} PDB: 3hxt_A* 3hy4_A* 3hy6_A
Probab=100.00 E-value=2.9e-49 Score=338.03 Aligned_cols=167 Identities=39% Similarity=0.629 Sum_probs=138.7
Q ss_pred cccHHHHhhcccccccccceEEeeccCCCCCChHHHHHHHHhCCCEEEEceeecC--Cceeeeecccccccchhhcceee
Q psy17389 71 FSWPYIGCFLKHPVYEQSKRISIYVDRDDEISTRKIIQHICSSGKECFIPRYDKT--EMTMRIFRQTWSGEATLRSRVVL 148 (259)
Q Consensus 71 ~s~~i~drll~~~~~~~a~~I~ly~s~~~Ev~t~~li~~~~~~gk~v~lP~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 148 (259)
+|..+++++++++.++++++|++|+|+++||||.+|++++++.||+|+||++... .|.|
T Consensus 32 ~s~~i~~~l~~~~~~~~a~~I~~Y~~~~~Evdt~~li~~~~~~gk~v~lP~~~~~~~~m~~------------------- 92 (203)
T 3hy3_A 32 QSRVLSQKVIAHSEYQKSKRISIFLSMQDEIETEEIIKDIFQRGKICFIPRYRFQSNHMDM------------------- 92 (203)
T ss_dssp HHHHHHHHHHTCHHHHHCSEEECCCCCTTSCCCHHHHHHHHHTTCEEEEEEEETTTTEEEE-------------------
T ss_pred HHHHHHHHHHhCHhhhcCCEEEEEcCCCCCcCHHHHHHHHHHCCCEEEEEEEecCCCeEEE-------------------
Confidence 4899999999988899999999999999999999999999999999999999653 3776
Q ss_pred eeEEEeccCCccccccCcCccCCCCCCCCCcccccCCCCCEEEEcCceeeCCCCccccCCchhhhhhhhcccc-CCCccE
Q psy17389 149 RELVLHRYEDLDNLIKNKENILQHSQTEPTEDAMKTGGLDLVVVPGRAFTETGKRMGRGKGYYDTYLSELKRI-SPHCKT 227 (259)
Q Consensus 149 ~~~~~~~~~~~~~l~~~~~gi~eP~~~~~~~~~~~~~~idlvivP~lafd~~G~RLG~G~GyYDr~l~~~~~~-~~~~~~ 227 (259)
+.+.++++++.|++|+|||+||.......+.+....+|+|||||||||++|+|||||||||||||+.+... +.++.+
T Consensus 93 --~~~~~~~~~~~L~~g~~GI~EP~~~~~~~~~~~~~~~DlvlVP~vaFD~~G~RLG~GgGyYDR~L~~~~~~~~~~~~~ 170 (203)
T 3hy3_A 93 --VRIESPEEISLLPKTSWNIPQPGEGDVREEALSTGGLDLIFMPGLGFDKHGNRLGRGKGYYDAYLKRCLQHQEVKPYT 170 (203)
T ss_dssp --EEECCHHHHTTSCBCTTSCBCCCTTCCCCBGGGTTCCSEEEECCSEECTTCCEECSSSCHHHHHHHHHTTTCSSCCEE
T ss_pred --EEeCChhhhhhccCCCCCCCCCCCccccccccCccCCCEEEeCCeEECCCCceecCCCchHHHHHHHhhhhcCCCCeE
Confidence 55555544456889999999998653222234456899999999999999999999999999999987431 124678
Q ss_pred EEEecCcccccCCCCCCCCccCCEEEcCCCC
Q psy17389 228 IGLAFSCQMVEDLPMSDHDVPLDYVIHPLST 258 (259)
Q Consensus 228 igl~~~~Q~~~~ip~e~~D~~ld~iiTe~~~ 258 (259)
|||||++|+++++|+|+||++||+||||+|+
T Consensus 171 igla~~~Q~~~~lP~e~hDi~ld~iiTe~~~ 201 (203)
T 3hy3_A 171 LALAFKEQICLQVPVNENDMKVDEVLYEDSS 201 (203)
T ss_dssp EEECCGGGBCSCCCCC--CCCCSEEECC---
T ss_pred EEEecHHhccCCCCCCcccccCCEEEeCCCc
Confidence 9999999999999999999999999999986
No 2
>1ydm_A Hypothetical protein YQGN; northeast structural genomics, SR44, X-RAY, PSI, protein structure initiative; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=6.4e-47 Score=319.64 Aligned_cols=158 Identities=28% Similarity=0.498 Sum_probs=135.0
Q ss_pred hcccHHHHhhcccccccccceEEeeccCCCCCChHHHHHHHHhCCCEEEEceee--cCCceeeeecccccccchhhccee
Q psy17389 70 SFSWPYIGCFLKHPVYEQSKRISIYVDRDDEISTRKIIQHICSSGKECFIPRYD--KTEMTMRIFRQTWSGEATLRSRVV 147 (259)
Q Consensus 70 ~~s~~i~drll~~~~~~~a~~I~ly~s~~~Ev~t~~li~~~~~~gk~v~lP~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 147 (259)
.++..+++++++++.++++++|++|+|+++|+||.+|+++++++||+|+||++. ...|.|
T Consensus 23 ~~s~~i~~~l~~~~~~~~a~~I~~y~~~~~Evdt~~li~~~~~~gk~v~lP~~~~~~~~m~f------------------ 84 (187)
T 1ydm_A 23 QKTERMYKYLFSLPEWQNAGTIAVTISRGLEIPTRPVIEQAWEEGKQVCIPKCHPDTKKMQF------------------ 84 (187)
T ss_dssp HHHHHHHHHHHTSHHHHTCSEEECCCCCTTSCCCHHHHHHHHHTTCEEEEECC---CCCCCE------------------
T ss_pred HHHHHHHHHHHhCHHhhhCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEeEEecCCCcEEE------------------
Confidence 348889999999988999999999999999999999999999999999999985 344777
Q ss_pred eeeEEEeccCCccccccCcCccCCCCCCCCCcccccCCCCCEEEEcCceeeCCCCccccCCchhhhhhhhccccCCCccE
Q psy17389 148 LRELVLHRYEDLDNLIKNKENILQHSQTEPTEDAMKTGGLDLVVVPGRAFTETGKRMGRGKGYYDTYLSELKRISPHCKT 227 (259)
Q Consensus 148 ~~~~~~~~~~~~~~l~~~~~gi~eP~~~~~~~~~~~~~~idlvivP~lafd~~G~RLG~G~GyYDr~l~~~~~~~~~~~~ 227 (259)
+.+ ++.+.|.+|+|||+||..... .......+|+|||||||||++|+|||||||||||||+.+. ..+
T Consensus 85 ---~~~---~~~~~L~~~~~gi~EP~~~~~--~~~~~~~iDlvivP~vafD~~G~RLG~GgGyYDR~L~~~~-----~~~ 151 (187)
T 1ydm_A 85 ---RTY---QTDDQLETVYAGLLEPVIEKT--KEVNPSQIDLMIVPGVCFDVNGFRVGFGGGYYDRYLSEYE-----GKT 151 (187)
T ss_dssp ---EEC---CCCTTHHHHHTTSCCCC--CC--CCCCGGGCCEEECCCSEEETTSCEECCSCCSTTTGGGTCC-----SEE
T ss_pred ---EEe---CCCCccCcCCCCCCCCCCccc--ccCCccCCCEEEeCCeEECCCCCcccCCccHHHHHHHhCC-----CCE
Confidence 343 334568899999999975321 1123457999999999999999999999999999999873 368
Q ss_pred EEEecCcccccCCCCCCCCccCCEEEcCCCC
Q psy17389 228 IGLAFSCQMVEDLPMSDHDVPLDYVIHPLST 258 (259)
Q Consensus 228 igl~~~~Q~~~~ip~e~~D~~ld~iiTe~~~ 258 (259)
||+||++|+++++|+|+||++||+||||+++
T Consensus 152 igla~~~Q~~~~lP~e~hD~~ld~iiTe~~~ 182 (187)
T 1ydm_A 152 VSLLLECQLFAHVPRLPHDIPVHKLITEDRI 182 (187)
T ss_dssp EEECCGGGEESCCCCCTTCCCCSEEECSSCE
T ss_pred EEEEeHHHhcCCCCCccccCcCCEEEECCcE
Confidence 9999999999999999999999999999974
No 3
>2jcb_A 5-formyltetrahydrofolate cyclo-ligase family PROT; folate metabolism; HET: ADP; 1.6A {Bacillus anthracis}
Probab=100.00 E-value=2e-46 Score=319.68 Aligned_cols=157 Identities=31% Similarity=0.529 Sum_probs=135.7
Q ss_pred cccHHHHhhcccccccccceEEeeccCCCCCChHHHHHHHHhCCCEEEEceeecC--Cceeeeecccccccchhhcceee
Q psy17389 71 FSWPYIGCFLKHPVYEQSKRISIYVDRDDEISTRKIIQHICSSGKECFIPRYDKT--EMTMRIFRQTWSGEATLRSRVVL 148 (259)
Q Consensus 71 ~s~~i~drll~~~~~~~a~~I~ly~s~~~Ev~t~~li~~~~~~gk~v~lP~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 148 (259)
+|..+++++++++.++++++|++|+|+++|+||.+|++.++++||+|+||++... .|.|
T Consensus 35 ~s~~i~~~l~~~~~~~~a~~I~~Y~~~~~Evdt~~li~~~~~~gk~v~lP~~~~~~~~m~f------------------- 95 (200)
T 2jcb_A 35 LSEQIVFSLYEQKEWAEAKTIGITLSMENEVNTYPIIEKAWKEGKRVVVPKCNKETRTMSF------------------- 95 (200)
T ss_dssp HHHHHHHHHHTSHHHHHCSEEECCCCCTTSCCCHHHHHHHHHTTCEEEEEEEETTTTEEEE-------------------
T ss_pred HHHHHHHHHHhChhhhcCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEeEEEcCCCcEEE-------------------
Confidence 4888999999998899999999999999999999999999999999999998643 3666
Q ss_pred eeEEEeccCCccccccCcCccCCCCCCCCCcccccCCCCCEEEEcCceeeCCCCccccCCchhhhhhhhccccCCCccEE
Q psy17389 149 RELVLHRYEDLDNLIKNKENILQHSQTEPTEDAMKTGGLDLVVVPGRAFTETGKRMGRGKGYYDTYLSELKRISPHCKTI 228 (259)
Q Consensus 149 ~~~~~~~~~~~~~l~~~~~gi~eP~~~~~~~~~~~~~~idlvivP~lafd~~G~RLG~G~GyYDr~l~~~~~~~~~~~~i 228 (259)
+.+ ++.++|.+|+|||+||..... .......+|+|||||||||++|+|||||||||||||+.+. ..+|
T Consensus 96 --~~~---~~~~~L~~g~~GI~EP~~~~~--~~~~~~~iDlvlVP~vAfD~~G~RLG~GgGyYDR~La~~~-----~~~i 163 (200)
T 2jcb_A 96 --RQI---SNFDQLETVYMNLREPIPALT--EEVNADEIDLQIVPGVAYTERGERIGYGGGYYDRYLVHYK-----GKTL 163 (200)
T ss_dssp --EEE---SSGGGEEEEETTEEEECGGGC--EECCGGGCSEEECCCSEECTTSCEECSSSCHHHHHTTTCC-----SEEE
T ss_pred --EEe---CCCcccccCCCCCCCCCCccc--ccCCccCCCEEEECCeEECCCCCeeccCCchHHHHHhhcC-----CCEE
Confidence 343 334568999999999974221 1123457999999999999999999999999999999873 2689
Q ss_pred EEecCcccccCCCCCCCCccCCEEEcCCCC
Q psy17389 229 GLAFSCQMVEDLPMSDHDVPLDYVIHPLST 258 (259)
Q Consensus 229 gl~~~~Q~~~~ip~e~~D~~ld~iiTe~~~ 258 (259)
|+||++|+++++|+|+||++||+||||+++
T Consensus 164 gla~~~Q~v~~lP~e~hDi~ld~iiTe~~~ 193 (200)
T 2jcb_A 164 SLAYSFQMVEHIPVEPFDKNVEKIITEKGT 193 (200)
T ss_dssp EECCGGGBCSCCCCCTTCCCCSEEEETTEE
T ss_pred EEEehhhccCCCCCCccCCcCCEEEECCeE
Confidence 999999999999999999999999999874
No 4
>1sou_A 5,10-methenyltetrahydrofolate synthetase; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; NMR {Aquifex aeolicus} SCOP: c.124.1.6
Probab=100.00 E-value=5.8e-46 Score=315.44 Aligned_cols=155 Identities=26% Similarity=0.504 Sum_probs=134.9
Q ss_pred hcccHHHHhhcccccccccceEEeeccCCCCCChHHHHHHHHhCCCEEEEceeecCCceeeeecccccccchhhcceeee
Q psy17389 70 SFSWPYIGCFLKHPVYEQSKRISIYVDRDDEISTRKIIQHICSSGKECFIPRYDKTEMTMRIFRQTWSGEATLRSRVVLR 149 (259)
Q Consensus 70 ~~s~~i~drll~~~~~~~a~~I~ly~s~~~Ev~t~~li~~~~~~gk~v~lP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (259)
.+|..+++++++++.++++++|++|+|+++|+||.+|++.++++ |+|+||++....|.|
T Consensus 24 ~~s~~i~~~l~~~~~~~~a~~I~~y~~~~~Evdt~~li~~~~~~-k~v~lP~~~~~~m~f-------------------- 82 (194)
T 1sou_A 24 RLSEKVISNLKSLPEFKKSKKVALYCPIKGEVDLTPLFPEVLKE-KELILPKVEGNEISL-------------------- 82 (194)
T ss_dssp HHHHHHHHHHHHCHHHHHCCEEEECCCCSSCCCCGGGHHHHHHH-SEEEEEEESSSSEEE--------------------
T ss_pred HHHHHHHHHHHhChhhhcCCEEEEECCCCCCCCHHHHHHHHHHc-CCEEEEEecCCeeEE--------------------
Confidence 34888999999988899999999999999999999999999999 999999984445777
Q ss_pred eEEEeccCCccccccCcCccCCCCCCCCCcccccCCCCCEEEEcCceeeCCCCccccCCchhhhhhhhccccCCCccEEE
Q psy17389 150 ELVLHRYEDLDNLIKNKENILQHSQTEPTEDAMKTGGLDLVVVPGRAFTETGKRMGRGKGYYDTYLSELKRISPHCKTIG 229 (259)
Q Consensus 150 ~~~~~~~~~~~~l~~~~~gi~eP~~~~~~~~~~~~~~idlvivP~lafd~~G~RLG~G~GyYDr~l~~~~~~~~~~~~ig 229 (259)
+.+. +.++|++|+|||+||.. . .......+|+|||||||||++|+|||||||||||||+.+. +.+||
T Consensus 83 -~~~~---~~~~L~~g~~GI~EP~~-~---~~~~~~~iDlvlvP~vafD~~G~RLG~GgGyYDR~L~~~~-----~~~ig 149 (194)
T 1sou_A 83 -YRVH---SPACLGVGAFGIMEPVE-G---ERVNPEDVDFIAVPGVAFDLEGYRLGFGKGYYDRLLKRVK-----GLKVG 149 (194)
T ss_dssp -EEES---SSCCCEECSSSCEECCS-S---EEECGGGCSEEEECCSCBCSSSCBCCSCCSSHHHHHHHCC-----SEEEE
T ss_pred -EEEC---CCCccCCCCCCCCCCCc-c---ccCCCCCCCEEEECCeEECCCCceeccCCcHHHHHHHhcC-----CCEEE
Confidence 4443 33568899999999974 1 1123457999999999999999999999999999999873 36899
Q ss_pred EecCcccccCCCCCCCCccCCEEEcCCCC
Q psy17389 230 LAFSCQMVEDLPMSDHDVPLDYVIHPLST 258 (259)
Q Consensus 230 l~~~~Q~~~~ip~e~~D~~ld~iiTe~~~ 258 (259)
+||++|+++++|+|+||++||+||||+++
T Consensus 150 la~~~Q~v~~lP~e~hDi~ld~iiTe~~~ 178 (194)
T 1sou_A 150 VAYSFQVFERLPRDAWDIPVDVLVTEKNV 178 (194)
T ss_dssp ECCGGGBCSCCCCCSCCCCCSEEECSSCE
T ss_pred EEchHhccCCCCCCcccccCCEEEECCeE
Confidence 99999999999999999999999999874
No 5
>1wkc_A HB8 TT1367 protein; structural genomics, riken structural genomics/proteomi initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.124.1.6
Probab=100.00 E-value=2.4e-44 Score=303.08 Aligned_cols=148 Identities=25% Similarity=0.421 Sum_probs=121.3
Q ss_pred cccHHHHhhcccccccccceEEeeccCCCCCChHHHHHHHHhCCCEEEEceeecCCceeeeecccccccchhhcceeeee
Q psy17389 71 FSWPYIGCFLKHPVYEQSKRISIYVDRDDEISTRKIIQHICSSGKECFIPRYDKTEMTMRIFRQTWSGEATLRSRVVLRE 150 (259)
Q Consensus 71 ~s~~i~drll~~~~~~~a~~I~ly~s~~~Ev~t~~li~~~~~~gk~v~lP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (259)
++..+++++++++.++++++|++|+|+.+|+||.+|++ +++ |+|+||++..+.|.|
T Consensus 22 ~s~~i~~~l~~~~~~~~a~~I~~y~~~~~Evdt~~li~--~~~-k~v~lP~~~~~~m~f--------------------- 77 (184)
T 1wkc_A 22 LSRAVGAALLPWLRERGFRHILLYHPLPHELNLLPLME--AYP-ARYYLPKVAGKGLTV--------------------- 77 (184)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEECCCCCTTCCCCTTHHH--HSC-CEEEEEEEETTEEEE---------------------
T ss_pred HHHHHHHHHHhChhhhcCCEEEEECCCCCCcCHHHHHH--hhc-CCEEEeEEeCCceEE---------------------
Confidence 37889999999888999999999999999999999999 778 999999875335655
Q ss_pred EEEeccCCccccccCcCccCCCCCCCCCcccccCCCCCEEEEcCceeeCCCCccccCCchhhhhhhhccccCCCccEEEE
Q psy17389 151 LVLHRYEDLDNLIKNKENILQHSQTEPTEDAMKTGGLDLVVVPGRAFTETGKRMGRGKGYYDTYLSELKRISPHCKTIGL 230 (259)
Q Consensus 151 ~~~~~~~~~~~l~~~~~gi~eP~~~~~~~~~~~~~~idlvivP~lafd~~G~RLG~G~GyYDr~l~~~~~~~~~~~~igl 230 (259)
+.+ + +|.+|+|||+|| ... ......+|+|||||||||++|+|||||||||||||+.+. +.+||+
T Consensus 78 ~~~---~---~L~~~~~gi~EP-~~~----~~~~~~iDlvlvP~vafD~~G~RLG~GgGyYDR~L~~~~-----~~~igl 141 (184)
T 1wkc_A 78 HPF---G---PLAPGPFGLLEP-TTP----PEDPRVLDLVVVPGLAFDREGYRLGHGQGFYDRFLKEVR-----AATVGV 141 (184)
T ss_dssp EES---C---CBC-------CB-CSC----CBCGGGCSEEEECCSEEETTSCEECCSSCHHHHHHHHCC-----SEEEEE
T ss_pred EEe---c---ccCCCCCCCCCC-CCc----cCCCCCCCEEEECcEEECCCCCEeeCCccHHHHHHHhcC-----CCEEEE
Confidence 332 2 578999999999 322 113457999999999999999999999999999999873 468999
Q ss_pred ecCcccccCCCCCCCCccCCEEEcCCCC
Q psy17389 231 AFSCQMVEDLPMSDHDVPLDYVIHPLST 258 (259)
Q Consensus 231 ~~~~Q~~~~ip~e~~D~~ld~iiTe~~~ 258 (259)
||++|+++++|+|+||++||+||||+++
T Consensus 142 ~~~~Q~~~~lp~e~hD~~ld~iiT~~~~ 169 (184)
T 1wkc_A 142 VPQALLFPALPRDPWDVPVDHLATEAGV 169 (184)
T ss_dssp CCGGGEESCCCCCTTCCCCSEEEETTEE
T ss_pred EchhhccCCCCCccccCccCEEEECCEE
Confidence 9999999999999999999999999874
No 6
>1sbq_A H91_ORF164, 5,10-methenyltetrahydrofolate synthetase homolog; MTHFS, 5- formyltetrahydrofolate cyclo-ligase, structural genomics; 2.20A {Mycoplasma pneumoniae} SCOP: c.124.1.6 PDB: 1u3f_A* 1u3g_A*
Probab=100.00 E-value=3.9e-41 Score=284.39 Aligned_cols=138 Identities=23% Similarity=0.352 Sum_probs=118.5
Q ss_pred hcccHHHHhhccccccc-ccceEEeeccCCCCCChHHHHHHHHhCCC-EEEEceeecC-Cceeeeecccccccchhhcce
Q psy17389 70 SFSWPYIGCFLKHPVYE-QSKRISIYVDRDDEISTRKIIQHICSSGK-ECFIPRYDKT-EMTMRIFRQTWSGEATLRSRV 146 (259)
Q Consensus 70 ~~s~~i~drll~~~~~~-~a~~I~ly~s~~~Ev~t~~li~~~~~~gk-~v~lP~~~~~-~~~~~~~~~~~~~~~~~~~~~ 146 (259)
.++..+++++++++.++ ++++|++|+|+++|+||.+|++.++++|| +|+||++..+ .|.|
T Consensus 49 ~~s~~i~~~L~~~~~~~~~a~~I~~Y~~~~~Evdt~~li~~~~~~gk~~v~lP~~~~~~~m~f----------------- 111 (189)
T 1sbq_A 49 HLDQKINQKLVAFLTPKPCIKTIALYEPIKNEVTFVDFFFEFLKINQIRAVYPKVISDTEIIF----------------- 111 (189)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEECCCCCTTSCCCCHHHHHHHHHTTCEEEEEEECSSSCEEE-----------------
T ss_pred HHHHHHHHHHHHhHHhHhhCCEEEEECCCCCCCCHHHHHHHHHHcCCCeEEEeEEccCCceEE-----------------
Confidence 34888999999988899 99999999999999999999999999999 9999998543 3666
Q ss_pred eeeeEEEeccCCccccccCcCccCCCCCCCCCcccccCCCCCEEEEcCceeeCCCCccccCCchhhhhhhhccccCCCcc
Q psy17389 147 VLRELVLHRYEDLDNLIKNKENILQHSQTEPTEDAMKTGGLDLVVVPGRAFTETGKRMGRGKGYYDTYLSELKRISPHCK 226 (259)
Q Consensus 147 ~~~~~~~~~~~~~~~l~~~~~gi~eP~~~~~~~~~~~~~~idlvivP~lafd~~G~RLG~G~GyYDr~l~~~~~~~~~~~ 226 (259)
+. +++. |. ....+|+|||||||||++|+|||||||||||||+.+.. ++.
T Consensus 112 ----~~---~~~~------------~~---------~~~~iDlvlVP~vAfD~~G~RLG~GgGyYDR~La~~~~---~~~ 160 (189)
T 1sbq_A 112 ----ID---QETN------------TF---------EPNQIDCFLIPLVGFNKDNYRLGFGKGYYDRYLMQLTR---QQP 160 (189)
T ss_dssp ----EC---TTCC------------EE---------CGGGCCEEEEECSEECTTCCEECCSSCHHHHHGGGCCS---CCC
T ss_pred ----EE---eCCC------------CC---------CcccCCEEEECceEECCCCCEeecCCchHHHHHHhcCC---CCC
Confidence 22 2211 11 12368999999999999999999999999999998753 357
Q ss_pred EEEEecCcccccCCCCCCCCccCCEEEcCC
Q psy17389 227 TIGLAFSCQMVEDLPMSDHDVPLDYVIHPL 256 (259)
Q Consensus 227 ~igl~~~~Q~~~~ip~e~~D~~ld~iiTe~ 256 (259)
+||+||++|+++ +|+|+||++||+||||+
T Consensus 161 ~igla~~~Q~v~-lP~e~hDiplD~IiTe~ 189 (189)
T 1sbq_A 161 KIGIAYSFQKGD-FLADPWDVQLDLIINDE 189 (189)
T ss_dssp EEEEECGGGBCC-CCCCTTSCCCSEEEECC
T ss_pred EEEEechHheeC-CCCCcccCcCCEEEcCC
Confidence 899999999999 99999999999999985
No 7
>3hy3_A 5-formyltetrahydrofolate cyclo-ligase; antifolate, cancer, ATP-binding, binding, magnesium, nucleotide-binding; HET: 10F; 1.80A {Homo sapiens} PDB: 3hxt_A* 3hy4_A* 3hy6_A
Probab=99.64 E-value=6.8e-17 Score=137.47 Aligned_cols=94 Identities=28% Similarity=0.465 Sum_probs=70.0
Q ss_pred cccccC--CcceEEEEeecCCCCccccCCceeecCCCCCCCccccCCCCccEEEeccccccccCcccchhcccHHHHhhc
Q psy17389 3 LARYDK--TEMTMLKLHRYEDLDNLIKNKENILQHSQTEPTEDAMKTGGLDLVVVPGRAFTETGKRCTVSFSWPYIGCFL 80 (259)
Q Consensus 3 ~p~~~~--~~m~~~~~~~~~~~~~l~~~~~gI~EP~~~~~~~~~~~~~~ldlvivP~~afd~~g~R~g~~~s~~i~drll 80 (259)
||++.. +.|.|..+...++.+.|.+|+|||+||.........+..+++|++||||+|||++|+|+|| |+|||||++
T Consensus 80 lP~~~~~~~~m~~~~~~~~~~~~~L~~g~~GI~EP~~~~~~~~~~~~~~~DlvlVP~vaFD~~G~RLG~--GgGyYDR~L 157 (203)
T 3hy3_A 80 IPRYRFQSNHMDMVRIESPEEISLLPKTSWNIPQPGEGDVREEALSTGGLDLIFMPGLGFDKHGNRLGR--GKGYYDAYL 157 (203)
T ss_dssp EEEEETTTTEEEEEEECCHHHHTTSCBCTTSCBCCCTTCCCCBGGGTTCCSEEEECCSEECTTCCEECS--SSCHHHHHH
T ss_pred EEEEecCCCeEEEEEeCChhhhhhccCCCCCCCCCCCccccccccCccCCCEEEeCCeEECCCCceecC--CCchHHHHH
Confidence 788743 4687777765433346889999999997532111234566899999999999999999999 999999999
Q ss_pred cccc---ccccceEEeeccCC
Q psy17389 81 KHPV---YEQSKRISIYVDRD 98 (259)
Q Consensus 81 ~~~~---~~~a~~I~ly~s~~ 98 (259)
+... .....+|+++++++
T Consensus 158 ~~~~~~~~~~~~~igla~~~Q 178 (203)
T 3hy3_A 158 KRCLQHQEVKPYTLALAFKEQ 178 (203)
T ss_dssp HHHTTTCSSCCEEEEECCGGG
T ss_pred HHhhhhcCCCCeEEEEecHHh
Confidence 8421 12355799988876
No 8
>1sou_A 5,10-methenyltetrahydrofolate synthetase; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; NMR {Aquifex aeolicus} SCOP: c.124.1.6
Probab=99.56 E-value=1.3e-15 Score=128.63 Aligned_cols=85 Identities=19% Similarity=0.316 Sum_probs=67.5
Q ss_pred cccccCCcceEEEEeecCCCCccccCCceeecCCCCCCCccccCCCCccEEEeccccccccCcccchhcccHHHHhhccc
Q psy17389 3 LARYDKTEMTMLKLHRYEDLDNLIKNKENILQHSQTEPTEDAMKTGGLDLVVVPGRAFTETGKRCTVSFSWPYIGCFLKH 82 (259)
Q Consensus 3 ~p~~~~~~m~~~~~~~~~~~~~l~~~~~gI~EP~~~~~~~~~~~~~~ldlvivP~~afd~~g~R~g~~~s~~i~drll~~ 82 (259)
||++.++.|.|..+. +.++|.+|+|||+||.. . .......+|+++|||+|||++|+|+|| |+|||||+++.
T Consensus 72 lP~~~~~~m~f~~~~---~~~~L~~g~~GI~EP~~-~---~~~~~~~iDlvlvP~vafD~~G~RLG~--GgGyYDR~L~~ 142 (194)
T 1sou_A 72 LPKVEGNEISLYRVH---SPACLGVGAFGIMEPVE-G---ERVNPEDVDFIAVPGVAFDLEGYRLGF--GKGYYDRLLKR 142 (194)
T ss_dssp EEEESSSSEEEEEES---SSCCCEECSSSCEECCS-S---EEECGGGCSEEEECCSCBCSSSCBCCS--CCSSHHHHHHH
T ss_pred EEEecCCeeEEEEEC---CCCccCCCCCCCCCCCc-c---ccCCCCCCCEEEECCeEECCCCceecc--CCcHHHHHHHh
Confidence 687755667766664 45689999999999964 1 223457899999999999999999999 99999999984
Q ss_pred ccccccceEEeeccCCC
Q psy17389 83 PVYEQSKRISIYVDRDD 99 (259)
Q Consensus 83 ~~~~~a~~I~ly~s~~~ 99 (259)
. . ..+|+++++++-
T Consensus 143 ~--~-~~~igla~~~Q~ 156 (194)
T 1sou_A 143 V--K-GLKVGVAYSFQV 156 (194)
T ss_dssp C--C-SEEEEECCGGGB
T ss_pred c--C-CCEEEEEchHhc
Confidence 2 2 357999888763
No 9
>1ydm_A Hypothetical protein YQGN; northeast structural genomics, SR44, X-RAY, PSI, protein structure initiative; 2.50A {Bacillus subtilis}
Probab=99.53 E-value=1.3e-15 Score=127.87 Aligned_cols=86 Identities=20% Similarity=0.344 Sum_probs=65.7
Q ss_pred ccccc--CCcceEEEEeecCCCCccccCCceeecCCCCCCCccccCCCCccEEEeccccccccCcccchhcccHHHHhhc
Q psy17389 3 LARYD--KTEMTMLKLHRYEDLDNLIKNKENILQHSQTEPTEDAMKTGGLDLVVVPGRAFTETGKRCTVSFSWPYIGCFL 80 (259)
Q Consensus 3 ~p~~~--~~~m~~~~~~~~~~~~~l~~~~~gI~EP~~~~~~~~~~~~~~ldlvivP~~afd~~g~R~g~~~s~~i~drll 80 (259)
||++. ++.|.|..+. +.++|.+|+|||+||.... ....+...+|+++|||+|||++|+|+|| |+|||||++
T Consensus 72 lP~~~~~~~~m~f~~~~---~~~~L~~~~~gi~EP~~~~--~~~~~~~~iDlvivP~vafD~~G~RLG~--GgGyYDR~L 144 (187)
T 1ydm_A 72 IPKCHPDTKKMQFRTYQ---TDDQLETVYAGLLEPVIEK--TKEVNPSQIDLMIVPGVCFDVNGFRVGF--GGGYYDRYL 144 (187)
T ss_dssp EECC---CCCCCEEECC---CCTTHHHHHTTSCCCC--C--CCCCCGGGCCEEECCCSEEETTSCEECC--SCCSTTTGG
T ss_pred EeEEecCCCcEEEEEeC---CCCccCcCCCCCCCCCCcc--cccCCccCCCEEEeCCeEECCCCCcccC--CccHHHHHH
Confidence 68763 4568766554 5568999999999997421 1123467899999999999999999999 999999999
Q ss_pred ccccccccceEEeeccCC
Q psy17389 81 KHPVYEQSKRISIYVDRD 98 (259)
Q Consensus 81 ~~~~~~~a~~I~ly~s~~ 98 (259)
+.. . ..+|++.++++
T Consensus 145 ~~~--~-~~~igla~~~Q 159 (187)
T 1ydm_A 145 SEY--E-GKTVSLLLECQ 159 (187)
T ss_dssp GTC--C-SEEEEECCGGG
T ss_pred HhC--C-CCEEEEEeHHH
Confidence 852 2 36788888865
No 10
>2jcb_A 5-formyltetrahydrofolate cyclo-ligase family PROT; folate metabolism; HET: ADP; 1.6A {Bacillus anthracis}
Probab=99.53 E-value=1.9e-15 Score=128.22 Aligned_cols=86 Identities=22% Similarity=0.374 Sum_probs=66.2
Q ss_pred ccccc--CCcceEEEEeecCCCCccccCCceeecCCCCCCCccccCCCCccEEEeccccccccCcccchhcccHHHHhhc
Q psy17389 3 LARYD--KTEMTMLKLHRYEDLDNLIKNKENILQHSQTEPTEDAMKTGGLDLVVVPGRAFTETGKRCTVSFSWPYIGCFL 80 (259)
Q Consensus 3 ~p~~~--~~~m~~~~~~~~~~~~~l~~~~~gI~EP~~~~~~~~~~~~~~ldlvivP~~afd~~g~R~g~~~s~~i~drll 80 (259)
||++. ++.|.|..+. +.++|.+|+|||+||... .....+...+|+++|||+|||++|+|+|| |+|||||++
T Consensus 83 lP~~~~~~~~m~f~~~~---~~~~L~~g~~GI~EP~~~--~~~~~~~~~iDlvlVP~vAfD~~G~RLG~--GgGyYDR~L 155 (200)
T 2jcb_A 83 VPKCNKETRTMSFRQIS---NFDQLETVYMNLREPIPA--LTEEVNADEIDLQIVPGVAYTERGERIGY--GGGYYDRYL 155 (200)
T ss_dssp EEEEETTTTEEEEEEES---SGGGEEEEETTEEEECGG--GCEECCGGGCSEEECCCSEECTTSCEECS--SSCHHHHHT
T ss_pred EeEEEcCCCcEEEEEeC---CCcccccCCCCCCCCCCc--ccccCCccCCCEEEECCeEECCCCCeecc--CCchHHHHH
Confidence 68764 3457665554 567899999999999642 11133567899999999999999999999 999999999
Q ss_pred ccccccccceEEeeccCC
Q psy17389 81 KHPVYEQSKRISIYVDRD 98 (259)
Q Consensus 81 ~~~~~~~a~~I~ly~s~~ 98 (259)
+.. . ..+|++.++++
T Consensus 156 a~~--~-~~~igla~~~Q 170 (200)
T 2jcb_A 156 VHY--K-GKTLSLAYSFQ 170 (200)
T ss_dssp TTC--C-SEEEEECCGGG
T ss_pred hhc--C-CCEEEEEehhh
Confidence 852 2 26788888865
No 11
>1wkc_A HB8 TT1367 protein; structural genomics, riken structural genomics/proteomi initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.124.1.6
Probab=99.48 E-value=1.1e-14 Score=122.07 Aligned_cols=80 Identities=25% Similarity=0.308 Sum_probs=55.0
Q ss_pred cccccCCcceEEEEeecCCCCccccCCceeecCCCCCCCccccCCCCccEEEeccccccccCcccchhcccHHHHhhccc
Q psy17389 3 LARYDKTEMTMLKLHRYEDLDNLIKNKENILQHSQTEPTEDAMKTGGLDLVVVPGRAFTETGKRCTVSFSWPYIGCFLKH 82 (259)
Q Consensus 3 ~p~~~~~~m~~~~~~~~~~~~~l~~~~~gI~EP~~~~~~~~~~~~~~ldlvivP~~afd~~g~R~g~~~s~~i~drll~~ 82 (259)
||++.++.|.|..+ + +|.+|+|||+|| .. ......++|+++|||+|||++|+|+|| |+|||||+++.
T Consensus 67 lP~~~~~~m~f~~~---~---~L~~~~~gi~EP-~~----~~~~~~~iDlvlvP~vafD~~G~RLG~--GgGyYDR~L~~ 133 (184)
T 1wkc_A 67 LPKVAGKGLTVHPF---G---PLAPGPFGLLEP-TT----PPEDPRVLDLVVVPGLAFDREGYRLGH--GQGFYDRFLKE 133 (184)
T ss_dssp EEEEETTEEEEEES---C---CBC-------CB-CS----CCBCGGGCSEEEECCSEEETTSCEECC--SSCHHHHHHHH
T ss_pred EeEEeCCceEEEEe---c---ccCCCCCCCCCC-CC----ccCCCCCCCEEEECcEEECCCCCEeeC--CccHHHHHHHh
Confidence 68763335655444 3 789999999999 32 122457899999999999999999999 99999999984
Q ss_pred ccccccceEEeeccCC
Q psy17389 83 PVYEQSKRISIYVDRD 98 (259)
Q Consensus 83 ~~~~~a~~I~ly~s~~ 98 (259)
. +..+|++.++++
T Consensus 134 ~---~~~~igl~~~~Q 146 (184)
T 1wkc_A 134 V---RAATVGVVPQAL 146 (184)
T ss_dssp C---CSEEEEECCGGG
T ss_pred c---CCCEEEEEchhh
Confidence 2 346789888875
No 12
>1sbq_A H91_ORF164, 5,10-methenyltetrahydrofolate synthetase homolog; MTHFS, 5- formyltetrahydrofolate cyclo-ligase, structural genomics; 2.20A {Mycoplasma pneumoniae} SCOP: c.124.1.6 PDB: 1u3f_A* 1u3g_A*
Probab=98.91 E-value=4.5e-10 Score=94.25 Aligned_cols=49 Identities=18% Similarity=0.253 Sum_probs=40.9
Q ss_pred CCCccEEEeccccccccCcccchhcccHHHHhhcccccccccceEEeeccCC
Q psy17389 47 TGGLDLVVVPGRAFTETGKRCTVSFSWPYIGCFLKHPVYEQSKRISIYVDRD 98 (259)
Q Consensus 47 ~~~ldlvivP~~afd~~g~R~g~~~s~~i~drll~~~~~~~a~~I~ly~s~~ 98 (259)
..++|++||||+|||++|+|+|| |+|||||+++... ....+|++.++++
T Consensus 121 ~~~iDlvlVP~vAfD~~G~RLG~--GgGyYDR~La~~~-~~~~~igla~~~Q 169 (189)
T 1sbq_A 121 PNQIDCFLIPLVGFNKDNYRLGF--GKGYYDRYLMQLT-RQQPKIGIAYSFQ 169 (189)
T ss_dssp GGGCCEEEEECSEECTTCCEECC--SSCHHHHHGGGCC-SCCCEEEEECGGG
T ss_pred cccCCEEEECceEECCCCCEeec--CCchHHHHHHhcC-CCCCEEEEechHh
Confidence 35689999999999999999999 9999999998532 1256799888865
No 13
>3rrl_A Succinyl-COA:3-ketoacid-coenzyme A transferase SU; MCSG,PSI-biology, structural genomics, midwest center for ST genomics; 2.29A {Helicobacter pylori}
Probab=53.53 E-value=20 Score=30.20 Aligned_cols=64 Identities=8% Similarity=0.103 Sum_probs=43.7
Q ss_pred CCCCEEEEcCceeeCCCC-ccccCCchhhhhhhhccccCCCccEEEEecCccccc--CCCCCCCCcc---CCEEEcC
Q psy17389 185 GGLDLVVVPGRAFTETGK-RMGRGKGYYDTYLSELKRISPHCKTIGLAFSCQMVE--DLPMSDHDVP---LDYVIHP 255 (259)
Q Consensus 185 ~~idlvivP~lafd~~G~-RLG~G~GyYDr~l~~~~~~~~~~~~igl~~~~Q~~~--~ip~e~~D~~---ld~iiTe 255 (259)
-.+|+.||-+-..|++|| .++...++|+..++...+ .+|.-+ .++++ .++.+.-.+| +|+||--
T Consensus 150 ~~~DvAli~a~~aD~~GN~~~~~~~~~~~~~~a~aA~-----~vIvev--e~iv~~g~l~p~~v~ipg~~VD~VV~~ 219 (235)
T 3rrl_A 150 ITGDYGLIKAYKSDTLGNLVFRKTARNFNPLCAMAAK-----ICVAEV--EEIVPAGELDPDEIHLPGIYVQHIYKG 219 (235)
T ss_dssp CCEEEEEEECSEEETTCCEECCGGGCTTHHHHHHTEE-----EEEEEE--SEEECTTSSCTTTCSBCGGGCSEEEEC
T ss_pred CCCeEEEEEeeecCCCceEEEecCcccccHHHHHhcC-----EEEEEE--eeccccCccCCceEEeChHHeEEEEEC
Confidence 368999999999999998 555556788988776421 333322 23343 4655555677 9999853
No 14
>3cdk_A Succinyl-COA:3-ketoacid-coenzyme A transferase subunit A; CO-expressed complex, hetero-tetramer, structural genomics, PSI-2; 2.59A {Bacillus subtilis}
Probab=45.85 E-value=26 Score=29.45 Aligned_cols=62 Identities=16% Similarity=0.160 Sum_probs=42.5
Q ss_pred CCCEEEEcCceeeCCCC-ccccCCchhhhhhhhccccCCCccEEEEecCccccc--CCCCCCCCc---cCCEEEc
Q psy17389 186 GLDLVVVPGRAFTETGK-RMGRGKGYYDTYLSELKRISPHCKTIGLAFSCQMVE--DLPMSDHDV---PLDYVIH 254 (259)
Q Consensus 186 ~idlvivP~lafd~~G~-RLG~G~GyYDr~l~~~~~~~~~~~~igl~~~~Q~~~--~ip~e~~D~---~ld~iiT 254 (259)
.+|+.||=+-..|++|| .+|...++|+..++...+ .+|.-+ .++++ .++.+.-.+ -+|+||-
T Consensus 151 ~~DVAlI~a~~aD~~Gn~~~~~~~~~~~~~~a~aAk-----~VIveV--n~~vp~g~l~p~~v~ipg~~VD~VV~ 218 (241)
T 3cdk_A 151 TGDVAIVKAWKADTMGNLIFRKTARNFNPIAAMAGK-----ITIAEA--EEIVEAGELDPDHIHTPGIYVQHVVL 218 (241)
T ss_dssp CEEEEEEEEEEEETTCCEECCGGGCTTHHHHHHHEE-----EEEEEE--EEEECTTSSCTTTCSBCGGGCSEEEE
T ss_pred CCcEEEEEeccCCCCCeEEEecCchhhHHHHHHhCC-----EEEEEE--eCCCCccccCCceEEeChHHeEEEEE
Confidence 58999999999999999 788788899977766532 344332 22333 344444456 3898885
No 15
>1k6d_A Acetate COA-transferase alpha subunit; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.90A {Escherichia coli} SCOP: c.124.1.2
Probab=35.35 E-value=25 Score=29.05 Aligned_cols=65 Identities=14% Similarity=0.156 Sum_probs=44.4
Q ss_pred CCCEEEEcCceeeCCCC-ccccCCchhhhhhhhccccCCCccEEEEecCccccc--CCCCCCCCc---cCCEEEcCCC
Q psy17389 186 GLDLVVVPGRAFTETGK-RMGRGKGYYDTYLSELKRISPHCKTIGLAFSCQMVE--DLPMSDHDV---PLDYVIHPLS 257 (259)
Q Consensus 186 ~idlvivP~lafd~~G~-RLG~G~GyYDr~l~~~~~~~~~~~~igl~~~~Q~~~--~ip~e~~D~---~ld~iiTe~~ 257 (259)
.+|+.||=+-..|++|| .+|...++||..++...+ .+|.-+ .++++ .++.+.-.+ -+|+||-.++
T Consensus 148 ~~DVAli~a~~aD~~Gn~~~~~~~~~~~~~~a~aA~-----~VIveV--n~~vp~~~l~p~~v~ipg~~VD~VV~~~~ 218 (220)
T 1k6d_A 148 RADLALIRAHRCDTLGNLTYQLSARNFNPLIALAAD-----ITLVEP--DELVETGELQPDHIVTPGAVIDHIIVSQE 218 (220)
T ss_dssp CEEEEEEEEEEEETTCCEECCHHHHTTHHHHHHHEE-----EEEEEE--EEEECTTCSCGGGCCBCGGGCCEEECCCC
T ss_pred CCcEEEEEeecCCCCceEEEecCCccccHHHHHhcC-----EEEEEE--ccccCccccCCceEEeChHHeEEEEecCC
Confidence 58999999999999998 777778899998776532 344322 22333 354444455 4899985443
No 16
>4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens}
Probab=20.51 E-value=38 Score=31.51 Aligned_cols=51 Identities=14% Similarity=0.223 Sum_probs=32.4
Q ss_pred ccCCchhhhhhhhccccCCCccEEEEecCcccc--------cCCCCCCCCccCCEEEcC
Q psy17389 205 GRGKGYYDTYLSELKRISPHCKTIGLAFSCQMV--------EDLPMSDHDVPLDYVIHP 255 (259)
Q Consensus 205 G~G~GyYDr~l~~~~~~~~~~~~igl~~~~Q~~--------~~ip~e~~D~~ld~iiTe 255 (259)
--|||=||..++.+...+...+.||+++....+ ..++...+-.++|.+|.+
T Consensus 368 i~~GGRYD~Lv~~f~~~G~~~pavGfa~gierl~~~le~~~~~~~~~~~~~~~~V~v~~ 426 (517)
T 4g85_A 368 VAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVAS 426 (517)
T ss_dssp SEEEEECHHHHHTTSSSCCCCCEEEEEECHHHHHHHHHHHHHHTTCCCCSCCCCEEEEE
T ss_pred ecCCCchhHHHHHhccCCCCCCcccccchHHHHHHHHHHhccccCccccCCCCEEEEEe
Confidence 347899999999875444456889998764322 123444445566766643
No 17
>4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens}
Probab=20.25 E-value=53 Score=29.77 Aligned_cols=52 Identities=13% Similarity=0.212 Sum_probs=33.0
Q ss_pred ccCCchhhhhhhhccccCCCccEEEEecCcccc--------cCCCCCCCCccCCEEEcCC
Q psy17389 205 GRGKGYYDTYLSELKRISPHCKTIGLAFSCQMV--------EDLPMSDHDVPLDYVIHPL 256 (259)
Q Consensus 205 G~G~GyYDr~l~~~~~~~~~~~~igl~~~~Q~~--------~~ip~e~~D~~ld~iiTe~ 256 (259)
.-|||=||..++.+...+...+.||.+....-+ ..+|...+-.++|.+|...
T Consensus 315 i~~GGRYD~L~~~~~~~g~~~pavGfaigieRl~~~l~~~~~~~~~~~~~~~~~v~v~~~ 374 (464)
T 4g84_A 315 VAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASA 374 (464)
T ss_dssp EEEEEECCSTGGGTSTTCCCCCEEEEEECHHHHHHHHHHHHHTTTCCCCSCCCCEEEECS
T ss_pred eccCCchhHHHHHhccCCCCCCCccccccHHHHHHHHHHhccccCcccccccceEEEEeC
Confidence 347899999998875434456788887653211 2345455566677777654
Done!