Query psy17390
Match_columns 522
No_of_seqs 369 out of 2524
Neff 8.3
Searched_HMMs 29240
Date Fri Aug 16 21:16:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17390.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17390hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 6.7E-44 2.3E-48 384.1 22.7 297 131-435 30-488 (510)
2 2rh1_A Beta-2-adrenergic recep 100.0 4.9E-41 1.7E-45 360.6 21.1 289 132-435 39-478 (500)
3 3vw7_A Proteinase-activated re 100.0 1.5E-40 5.2E-45 353.6 21.1 297 131-436 18-467 (484)
4 3eml_A Human adenosine A2A rec 100.0 3.3E-40 1.1E-44 350.8 17.9 294 134-432 22-469 (488)
5 4dkl_A MU-type opioid receptor 100.0 1.7E-39 5.7E-44 343.1 22.9 289 131-431 15-453 (464)
6 3uon_A Human M2 muscarinic ace 100.0 6E-40 2E-44 347.2 19.4 288 133-436 23-460 (467)
7 2ks9_A Substance-P receptor; w 100.0 1E-38 3.5E-43 327.2 27.6 290 133-434 32-322 (364)
8 2lnl_A C-X-C chemokine recepto 100.0 1.8E-39 6.2E-44 323.9 21.0 279 133-435 11-295 (296)
9 3odu_A C-X-C chemokine recepto 100.0 1.2E-39 4.1E-44 348.3 18.4 195 132-335 47-242 (502)
10 1u19_A Rhodopsin; G protein-co 100.0 1.9E-38 6.5E-43 322.5 26.1 290 131-436 36-326 (349)
11 4amj_A Beta-1 adrenergic recep 100.0 3.6E-39 1.2E-43 322.5 18.1 291 131-435 9-302 (315)
12 4eiy_A Adenosine receptor A2A/ 100.0 5.3E-40 1.8E-44 345.6 12.1 298 130-432 28-428 (447)
13 4ea3_A Fusion protein of nocic 100.0 8E-38 2.7E-42 329.5 27.4 287 130-433 122-409 (434)
14 3v2y_A Sphingosine 1-phosphate 100.0 4.5E-38 1.6E-42 339.3 24.4 187 133-333 63-250 (520)
15 3pbl_A D(3) dopamine receptor, 100.0 2.5E-38 8.4E-43 336.3 20.8 188 133-335 38-230 (481)
16 3rze_A Histamine H1 receptor, 100.0 2.5E-38 8.7E-43 333.2 19.3 287 134-436 9-445 (452)
17 2z73_A Rhodopsin; visual pigme 100.0 5E-37 1.7E-41 324.3 26.5 289 131-428 32-330 (448)
18 3sn6_R Lysozyme, beta-2 adrene 100.0 8.9E-38 3E-42 336.3 15.7 291 132-436 181-493 (514)
19 1hll_A Alpha-2A adrenergic rec 98.3 2.1E-07 7.2E-12 59.5 2.0 29 219-247 2-31 (32)
20 2koe_A Human cannabinoid recep 97.5 4.1E-05 1.4E-09 51.3 1.9 33 396-432 4-36 (40)
21 2ki9_A Cannabinoid receptor 2; 96.9 5.8E-05 2E-09 48.3 -2.0 28 351-379 2-29 (33)
22 2lot_A Apelin receptor; membra 95.3 0.0019 6.4E-08 47.7 -1.0 31 135-165 30-60 (64)
23 3eml_A Human adenosine A2A rec 90.7 3.4 0.00012 42.1 14.4 40 398-437 431-470 (488)
24 3odu_A C-X-C chemokine recepto 83.2 14 0.00048 37.7 13.8 77 347-424 405-487 (502)
25 4eiy_A Adenosine receptor A2A/ 81.4 1.9 6.6E-05 43.5 6.2 37 400-436 392-428 (447)
26 2z73_A Rhodopsin; visual pigme 51.9 1.9E+02 0.0064 28.6 17.6 42 399-440 297-338 (448)
27 2ks9_A Substance-P receptor; w 51.0 1.7E+02 0.0057 27.8 18.5 48 134-183 30-77 (364)
28 1u19_A Rhodopsin; G protein-co 32.8 3E+02 0.01 25.5 13.5 53 129-183 31-83 (349)
29 4ea3_A Fusion protein of nocic 30.0 4E+02 0.014 26.0 21.1 50 133-184 122-171 (434)
30 4dkl_A MU-type opioid receptor 29.4 4E+02 0.014 25.9 12.3 52 131-184 12-63 (464)
31 4ay9_X Follicle-stimulating ho 28.5 16 0.00053 35.8 0.8 19 2-20 249-267 (350)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=100.00 E-value=6.7e-44 Score=384.09 Aligned_cols=297 Identities=19% Similarity=0.255 Sum_probs=226.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHhhhccCCC---CchhHHhHHHHHHHHHHHhcchhhhhhhhcc--ccccccccc
Q psy17390 131 RKLLKLTLTQFSELPFGVLGNGTLVLIFARHKNMR---SVPNTYILSLALGDLLVIICGVPFTSTLYTL--ESWPYGPHI 205 (522)
Q Consensus 131 ~~~~~~~ii~~ii~llgi~gN~lVi~vi~~~r~lr---~~~~~li~nLAvaDll~~l~~lp~~i~~~~~--~~~~~~~~~ 205 (522)
...++++++|.+++++|++||++|++++.++|++| +++|+|++|||+||++++++.+|+.+...+. +.|.+|+.+
T Consensus 30 ~~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~~~ 109 (510)
T 4grv_A 30 YSKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAG 109 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhHHH
Confidence 44567888999999999999999999999877655 6889999999999999999999998876553 579999999
Q ss_pred chhhhhhhhhhhHHHHHHHHHHHHHHHHHhhccccccc-cCCchhhhhhHHHHHHHHHHHHHHHhhhcccccccc-CCCc
Q psy17390 206 CKLSEATRDISIGVSVFTLTALSAERYCAIVNPIRSHI-SSKPLTIVTAFAIWVLAIILALPSALFSHVQPATTA-SNDT 283 (522)
Q Consensus 206 C~~~~~l~~~~~~~Si~~L~~ISidRy~aI~~Pl~y~~-~t~r~~~~~i~~iWl~s~l~alp~~~~~~~~~~~~~-~~~~ 283 (522)
|++..++..++..+|+++|++||+|||+||++|++|+. .+++++..+++++|++++++++|+++.++....... ....
T Consensus 110 C~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~ 189 (510)
T 4grv_A 110 CRGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSADGTHPG 189 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHEEEEECSSSSCCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHHHHhhcccccccCCCCCC
Confidence 99999999999999999999999999999999999987 899999999999999999999999998776543322 2223
Q ss_pred eEEecCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC-------------------------
Q psy17390 284 IYFCSPFPIEYGQQYKQTVVLCKFLAYYLGPLCVIACFYILMARHLELSTRNMPG------------------------- 338 (522)
Q Consensus 284 ~~~C~~~~~~~~~~~~~~y~~~~~i~~~~iPliiii~~Y~~I~~~lr~~~~~~~~------------------------- 338 (522)
...|.+.+.. .....|.++.+++.|++|+++|+++|.+|+++++++.+....
T Consensus 190 ~~~c~~~~~~---~~~~~~~~~~~~~~f~iP~~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (510)
T 4grv_A 190 GLVCTPIVDT---ATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMVNIFEMLRIDEGLRLKIYKDTEGYYTIGIGH 266 (510)
T ss_dssp GEEEEECSCH---HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTSCTHHHHHHHHTCCEEEEEECTTSCEEEETTE
T ss_pred cccccccccc---chhhhhhhhhhhHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhcccccccccccccccccccccccc
Confidence 4567654432 445567777778889999999999999999999864321000
Q ss_pred --------------------------------------------------------------------------------
Q psy17390 339 -------------------------------------------------------------------------------- 338 (522)
Q Consensus 339 -------------------------------------------------------------------------------- 338 (522)
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (510)
T 4grv_A 267 LLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGV 346 (510)
T ss_dssp ECCCSSSHHHHHHSCCC---CCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHSCSHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCccccccCcCCCCCCCCcccCCccccccCCCCcccccccccCCCCCCCcCccccccccccCCccccCCCCCC
Confidence
Q ss_pred ----------------------------------------------CccCcchhHHHHHHHHHHHHHHHHHHHHhhhHHH
Q psy17390 339 ----------------------------------------------ELLGQSSQSRARKKVAKMVSVLASSTLASTLSPY 372 (522)
Q Consensus 339 ----------------------------------------------~~~~~~~~~~~~~k~~k~l~iiv~~f~lc~w~P~ 372 (522)
......+..++++|++||+++|+++|++| |+||
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~erk~~k~L~iVv~~F~iC-WlPf 425 (510)
T 4grv_A 347 AGFTNSLRMLNNKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSGSVQALRHGVLVARAVVIAFVVC-WLPY 425 (510)
T ss_dssp TTCHHHHHHHTTTCHHHHHHHHHSSCSCCSSHHHHHHHHHHHHHSSSGGGTTSTTTHHHHHHHHHHHHHHHHHHH-HHHH
T ss_pred CCCCccccccccCCCcccccccccccccccCCccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 00000112246789999999999999999 9999
Q ss_pred HHHHHHhhcccCCcch----hhHHHHHHHHHHHhhhhccCChhhhHHhHHHHhHHHHHHhhhhcCcc
Q psy17390 373 TSLVVCLGNISTGICS----VVVHLAVNYNMMSPWCHSIVPPVEDSTLALALGFHQIQSFTKLSSVY 435 (522)
Q Consensus 373 ~i~~l~~~~~~~~~~~----~~~~~~~~~~~~l~~~ns~lNPiIY~~iy~~~~~~~~~~frk~~~~~ 435 (522)
+++.++..+.+..... ....+...+..+|.|+|||+||+||++++.- ||+.|+|.++|+
T Consensus 426 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~Y~NS~iNPiIY~~~n~~----FR~aFk~iL~C~ 488 (510)
T 4grv_A 426 HVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALAYASSAINPILYNLVSAN----FRQVFLSTLACL 488 (510)
T ss_dssp HHHHHHHHTTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC----CCCC--------
T ss_pred HHHHHHHHHcCcccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH----HHHHHHHHHhhc
Confidence 9998887554433221 2334455678899999999999977655544 445557766654
No 2
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=100.00 E-value=4.9e-41 Score=360.65 Aligned_cols=289 Identities=15% Similarity=0.184 Sum_probs=226.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHhhhccCCCCchhHHhHHHHHHHHHHHhcchhhhhhhhcccccccccccchhhhh
Q psy17390 132 KLLKLTLTQFSELPFGVLGNGTLVLIFARHKNMRSVPNTYILSLALGDLLVIICGVPFTSTLYTLESWPYGPHICKLSEA 211 (522)
Q Consensus 132 ~~~~~~ii~~ii~llgi~gN~lVi~vi~~~r~lr~~~~~li~nLAvaDll~~l~~lp~~i~~~~~~~~~~~~~~C~~~~~ 211 (522)
...++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|+.+.....+.|.+|...|++..+
T Consensus 39 ~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~~~~~ 118 (500)
T 2rh1_A 39 WVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTS 118 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhhHHHH
Confidence 34567888999999999999999999999999999999999999999999999999999888888899999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHhhccccccc-cCCchhhhhhHHHHHHHHHHHHHHHh-hhccccccccCCCceEEecC
Q psy17390 212 TRDISIGVSVFTLTALSAERYCAIVNPIRSHI-SSKPLTIVTAFAIWVLAIILALPSAL-FSHVQPATTASNDTIYFCSP 289 (522)
Q Consensus 212 l~~~~~~~Si~~L~~ISidRy~aI~~Pl~y~~-~t~r~~~~~i~~iWl~s~l~alp~~~-~~~~~~~~~~~~~~~~~C~~ 289 (522)
+..++..+|++++++||+|||+||++|++|+. .+++++..+++++|+++++++++|++ .+..... .....|..
T Consensus 119 ~~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~~~~-----~~~~~c~~ 193 (500)
T 2rh1_A 119 IDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATH-----QEAINCYA 193 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCS-----HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHHHHHHHhcchheeeecccc-----cCcceecc
Confidence 99999999999999999999999999999886 89999999999999999999965543 3322110 11123543
Q ss_pred CCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-----CC------------CCc------------
Q psy17390 290 FPIEYGQQYKQTVVLCKFLAYYLGPLCVIACFYILMARHLELSTRN-----MP------------GEL------------ 340 (522)
Q Consensus 290 ~~~~~~~~~~~~y~~~~~i~~~~iPliiii~~Y~~I~~~lr~~~~~-----~~------------~~~------------ 340 (522)
.+...+......|.++..++.+++|+++|+++|.+|++.+|++.++ .. +..
T Consensus 194 ~~~~~~~~~~~~y~~~~~~~~~~iPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (500)
T 2rh1_A 194 EETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSP 273 (500)
T ss_dssp CTTCCCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHTCCEEEEEECTTSCEEEETTEEEESCS
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccccccCCCCCCCCCCcc
Confidence 2211111223456777778889999999999999999999987654 00 000
Q ss_pred ----------------c---------------------------------------------------------------
Q psy17390 341 ----------------L--------------------------------------------------------------- 341 (522)
Q Consensus 341 ----------------~--------------------------------------------------------------- 341 (522)
.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (500)
T 2rh1_A 274 SLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNS 353 (500)
T ss_dssp CHHHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHSCHHHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred cccccccccccccCCCCCCccchhhhhhcccCCccccccccccCCCCCCCCCcccccccchhhcccCCCCccccccccCc
Confidence 0
Q ss_pred -----------------------------------------CcchhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhh
Q psy17390 342 -----------------------------------------GQSSQSRARKKVAKMVSVLASSTLASTLSPYTSLVVCLG 380 (522)
Q Consensus 342 -----------------------------------------~~~~~~~~~~k~~k~l~iiv~~f~lc~w~P~~i~~l~~~ 380 (522)
...+..++++|++|++++|+++|++| |+||.++.++..
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ka~ktl~ivv~~F~ic-WlP~~i~~l~~~ 432 (500)
T 2rh1_A 354 LRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLC-WLPFFIVNIVHV 432 (500)
T ss_dssp HHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSGGGTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred hhhhhcccccccccccccccccCCCCcccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 00000126789999999999999999 999999988775
Q ss_pred cccCCcchhhHHHHHHHHHHHhhhhccCChhhhHHhHHHHhHHHHHHhhhhcCcc
Q psy17390 381 NISTGICSVVVHLAVNYNMMSPWCHSIVPPVEDSTLALALGFHQIQSFTKLSSVY 435 (522)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~l~~~ns~lNPiIY~~iy~~~~~~~~~~frk~~~~~ 435 (522)
..... ....+..+..++.++||++||+||. +...+|+.|+|.+++.
T Consensus 433 ~~~~~----~~~~~~~~~~~L~y~NS~iNPiIY~-----~n~~FR~af~~il~~~ 478 (500)
T 2rh1_A 433 IQDNL----IRKEVYILLNWIGYVNSGFNPLIYC-----RSPDFRIAFQELLCLR 478 (500)
T ss_dssp HSTTS----SCHHHHHHHHHHHHHGGGTHHHHGG-----GSHHHHHHHHHHTTC-
T ss_pred HcCCc----ccHHHHHHHHHHHHHHHhhcchhhh-----ccHHHHHHHHHHHhhh
Confidence 53221 2234556788999999999999884 3566777778877653
No 3
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=353.61 Aligned_cols=297 Identities=16% Similarity=0.201 Sum_probs=223.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHhhhccCCCCchhHHhHHHHHHHHHHHhcchhhhhhhhcc-cccccccccchhh
Q psy17390 131 RKLLKLTLTQFSELPFGVLGNGTLVLIFARHKNMRSVPNTYILSLALGDLLVIICGVPFTSTLYTL-ESWPYGPHICKLS 209 (522)
Q Consensus 131 ~~~~~~~ii~~ii~llgi~gN~lVi~vi~~~r~lr~~~~~li~nLAvaDll~~l~~lp~~i~~~~~-~~~~~~~~~C~~~ 209 (522)
....++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|+++++. +|+.+..... +.|.++...|++.
T Consensus 18 ~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~-~~~~~~~~~~~~~~~~~~~~C~~~ 96 (484)
T 3vw7_A 18 WLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSV-LPFKISYYFSGSDWQFGSELCRFV 96 (484)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTT-HHHHHHHHHTTSCCCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCcccchhHHhHH
Confidence 4456788899999999999999999999999999999999999999999999874 5655554444 5899999999999
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHhhccccccc-cCCchhhhhhHHHHHHHHHHHHHHHhhhccccccccCCCceEEec
Q psy17390 210 EATRDISIGVSVFTLTALSAERYCAIVNPIRSHI-SSKPLTIVTAFAIWVLAIILALPSALFSHVQPATTASNDTIYFCS 288 (522)
Q Consensus 210 ~~l~~~~~~~Si~~L~~ISidRy~aI~~Pl~y~~-~t~r~~~~~i~~iWl~s~l~alp~~~~~~~~~~~~~~~~~~~~C~ 288 (522)
.++..++..+|++++++||+|||+||++|++|+. .+++++..+++++|++++++++|+++........ ......|.
T Consensus 97 ~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~---~~~~~~C~ 173 (484)
T 3vw7_A 97 TAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVP---GLGITTCH 173 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEET---TTTEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccC---CCCCceee
Confidence 9999999999999999999999999999999986 8999999999999999999999999877654422 23446797
Q ss_pred CCCccc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC--------------Ccc------------
Q psy17390 289 PFPIEY-GQQYKQTVVLCKFLAYYLGPLCVIACFYILMARHLELSTRNMPG--------------ELL------------ 341 (522)
Q Consensus 289 ~~~~~~-~~~~~~~y~~~~~i~~~~iPliiii~~Y~~I~~~lr~~~~~~~~--------------~~~------------ 341 (522)
..+... ...+...|.++..++.+++|+++|+++|++|++.++++.++.+. ...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ti~~~~~~~~ 253 (484)
T 3vw7_A 174 DVLSETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSANIFEMLRIDEGLRLKIYKNTEGYYTIGIGHLLTK 253 (484)
T ss_dssp SSCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHCCEEEEEECTTSCEEEETTEEEES
T ss_pred ccCCccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhHHHHhhhhccchhhhhccccccceeeeccccccC
Confidence 644432 23445557777778889999999999999999999987641100 000
Q ss_pred --------------------------------------------------------------------------------
Q psy17390 342 -------------------------------------------------------------------------------- 341 (522)
Q Consensus 342 -------------------------------------------------------------------------------- 341 (522)
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 333 (484)
T 3vw7_A 254 SPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFT 333 (484)
T ss_dssp SSCHHHHHHHHHHHHTSCCSSBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHTTSCHHHHHHHHHHHHHHHHHHHHTTH
T ss_pred CcchhcccccccccccccCCCCCCcccccccccccccccccccccccccCcccccccccccchhhccccccCccccccch
Confidence
Q ss_pred -------------------------------------------CcchhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q psy17390 342 -------------------------------------------GQSSQSRARKKVAKMVSVLASSTLASTLSPYTSLVVC 378 (522)
Q Consensus 342 -------------------------------------------~~~~~~~~~~k~~k~l~iiv~~f~lc~w~P~~i~~l~ 378 (522)
......++++|++||+++++++|++| |+||.++.++
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~r~~k~l~~v~~~F~ic-wlP~~i~~l~ 412 (484)
T 3vw7_A 334 NSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYANRSKKSRALFLSAAVFCIFIIC-FGPTNVLLIA 412 (484)
T ss_dssp HHHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHCSSHHHHCHHHHHHHHHHHHHHHHHHHHT-THHHHHHHHH
T ss_pred hhhhhhhccchhhhhhhhhhhhhhccCcccccCccceeecchhccccchhHHHHHHHHHHHHHHHHHHH-hhHHHHHHHH
Confidence 00013456789999999999999999 9999999887
Q ss_pred hhcccC-CcchhhHHHHHHHHHHHhhhhccCChhhhHHhHHHHhHHHHHHhhhhcCccc
Q psy17390 379 LGNIST-GICSVVVHLAVNYNMMSPWCHSIVPPVEDSTLALALGFHQIQSFTKLSSVYT 436 (522)
Q Consensus 379 ~~~~~~-~~~~~~~~~~~~~~~~l~~~ns~lNPiIY~~iy~~~~~~~~~~frk~~~~~~ 436 (522)
...... .........+..+..++.++||++||+|| .++...+|++|+|.+||+.
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~iNPiIY----~~~~~~fR~~~~~ll~~~~ 467 (484)
T 3vw7_A 413 HYSFLSHTSTTEAAYFAYLLCVCVSSISCCIDPLIY----YYASSECQRYVYSILCCKE 467 (484)
T ss_dssp HHHTCTTCTTSHHHHHHHHHHHHHHTTHHHHHHHHH----HHTSSCC------------
T ss_pred HHHHhccccchhHHHHHHHHHHHHHHhccccchHHH----HHhhHHHHHHHHHHHhhcc
Confidence 643322 22233444566788999999999999966 4555556666677776543
No 4
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=100.00 E-value=3.3e-40 Score=350.83 Aligned_cols=294 Identities=16% Similarity=0.129 Sum_probs=226.4
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHhhhccCCCCchhHHhHHHHHHHHHHHhcchhhhhhhhcccccccccccchhhhhhh
Q psy17390 134 LKLTLTQFSELPFGVLGNGTLVLIFARHKNMRSVPNTYILSLALGDLLVIICGVPFTSTLYTLESWPYGPHICKLSEATR 213 (522)
Q Consensus 134 ~~~~ii~~ii~llgi~gN~lVi~vi~~~r~lr~~~~~li~nLAvaDll~~l~~lp~~i~~~~~~~~~~~~~~C~~~~~l~ 213 (522)
.++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|+.+... ..|..+...|++..++.
T Consensus 22 ~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~--~~~~~~~~~C~~~~~~~ 99 (488)
T 3eml_A 22 SVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHGCLFIACFV 99 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHT--TCCEECHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccccccchHHHHHHHHH
Confidence 4677888999999999999999999999999999999999999999999998999877644 36888889999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhccccccc-cCCchhhhhhHHHHHHHHHHHHHHHhhhccccccccCCCceEEecCCCc
Q psy17390 214 DISIGVSVFTLTALSAERYCAIVNPIRSHI-SSKPLTIVTAFAIWVLAIILALPSALFSHVQPATTASNDTIYFCSPFPI 292 (522)
Q Consensus 214 ~~~~~~Si~~L~~ISidRy~aI~~Pl~y~~-~t~r~~~~~i~~iWl~s~l~alp~~~~~~~~~~~~~~~~~~~~C~~~~~ 292 (522)
.++..+|++++++||+|||+||++|++|+. .+++++..+++++|++++++++|+++.+...............|...+.
T Consensus 100 ~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 179 (488)
T 3eml_A 100 LVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCGEGQV 179 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGGTCCSSCC-------CCSSCTTCE
T ss_pred HHHHHHHHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccccccc
Confidence 999999999999999999999999999876 8999999999999999999999999877655433222222344654322
Q ss_pred c---cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCc-----------------------------
Q psy17390 293 E---YGQQYKQTVVLCKFLAYYLGPLCVIACFYILMARHLELSTRNMPGEL----------------------------- 340 (522)
Q Consensus 293 ~---~~~~~~~~y~~~~~i~~~~iPliiii~~Y~~I~~~lr~~~~~~~~~~----------------------------- 340 (522)
. .+......+.++.+++.+++|+++|+++|++|++.+|++.++.+...
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (488)
T 3eml_A 180 ACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSP 259 (488)
T ss_dssp ECCHHHHSCHHHHHTTTHHHHTHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHTCCEEEEEECTTSCEEEETTEEEESSS
T ss_pred eeeccccccchhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhccccccchhhccccccceeccccccCCCCc
Confidence 1 12223344555667788999999999999999999998754421000
Q ss_pred --------------------------------------------------------------------------------
Q psy17390 341 -------------------------------------------------------------------------------- 340 (522)
Q Consensus 341 -------------------------------------------------------------------------------- 340 (522)
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (488)
T 3eml_A 260 SLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNS 339 (488)
T ss_dssp CHHHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHSCHHHHHHHHHHHHHHCHHHHTTCHHH
T ss_pred cccccccccccCCCCCCCCCCChhhhccCcccCccccccccCCCCCCCCCcCCcchHHHhhhhccccCCCCCCccCCCCc
Confidence
Q ss_pred -----------------------------------------cCcchhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHh
Q psy17390 341 -----------------------------------------LGQSSQSRARKKVAKMVSVLASSTLASTLSPYTSLVVCL 379 (522)
Q Consensus 341 -----------------------------------------~~~~~~~~~~~k~~k~l~iiv~~f~lc~w~P~~i~~l~~ 379 (522)
....+..++++|++|++++++++|++| |+|+.++.++.
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~iv~~F~ic-w~P~~i~~~~~ 418 (488)
T 3eml_A 340 LRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYRSTLQKEVHAAKSLAIIVGLFALC-WLPLHIINCFT 418 (488)
T ss_dssp HHHHHTTCHHHHHHHHTTSHHHHHCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred chhhhhccccccccCcccccCcccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHH
Confidence 000112367899999999999999999 99999998877
Q ss_pred hcccCCcchhhHHHHHHHHHHHhhhhccCChhhhHHhHHHHhHHHHHHhhhhc
Q psy17390 380 GNISTGICSVVVHLAVNYNMMSPWCHSIVPPVEDSTLALALGFHQIQSFTKLS 432 (522)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~l~~~ns~lNPiIY~~iy~~~~~~~~~~frk~~ 432 (522)
...... ......+..+..++.++||++||+||.+...-|+..+++.|++.+
T Consensus 419 ~~~~~~--~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~l~~~~~ 469 (488)
T 3eml_A 419 FFCPDC--SHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHV 469 (488)
T ss_dssp HHCTTS--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTT
T ss_pred hccCcc--ccccHHHHHHHHHHHHHHhhhchhhhhhcCHHHHHHHHHHHhhcc
Confidence 544322 222334556788899999999999776666665555544444433
No 5
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=100.00 E-value=1.7e-39 Score=343.14 Aligned_cols=289 Identities=19% Similarity=0.339 Sum_probs=233.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHhhhccCCCCchhHHhHHHHHHHHHHHhcchhhhhhhhcccccccccccchhhh
Q psy17390 131 RKLLKLTLTQFSELPFGVLGNGTLVLIFARHKNMRSVPNTYILSLALGDLLVIICGVPFTSTLYTLESWPYGPHICKLSE 210 (522)
Q Consensus 131 ~~~~~~~ii~~ii~llgi~gN~lVi~vi~~~r~lr~~~~~li~nLAvaDll~~l~~lp~~i~~~~~~~~~~~~~~C~~~~ 210 (522)
...+++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|+++++. +|+.+.....+.|.++...|++..
T Consensus 15 ~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~~~~~~~~~C~~~~ 93 (464)
T 4dkl_A 15 VTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLMGTWPFGNILCKIVI 93 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSCCSCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcccccchhhhHH
Confidence 3456788889999999999999999999999999999999999999999999986 999888888899999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhhccccccc-cCCchhhhhhHHHHHHHHHHHHHHHhhhccccccccCCCceEEecC
Q psy17390 211 ATRDISIGVSVFTLTALSAERYCAIVNPIRSHI-SSKPLTIVTAFAIWVLAIILALPSALFSHVQPATTASNDTIYFCSP 289 (522)
Q Consensus 211 ~l~~~~~~~Si~~L~~ISidRy~aI~~Pl~y~~-~t~r~~~~~i~~iWl~s~l~alp~~~~~~~~~~~~~~~~~~~~C~~ 289 (522)
++..++..+|++++++||+|||+||++|++|+. .+++++..+++++|++++++++|+++....... .+...|..
T Consensus 94 ~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~~~~-----~~~~~c~~ 168 (464)
T 4dkl_A 94 SIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYR-----QGSIDCTL 168 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCCEEE-----TTEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHHHHHHHHHheeeccc-----CCCceEEe
Confidence 999999999999999999999999999999886 899999999999999999999999886554332 23467876
Q ss_pred CCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC------------------------------
Q psy17390 290 FPIEYGQQYKQTVVLCKFLAYYLGPLCVIACFYILMARHLELSTRNMPGE------------------------------ 339 (522)
Q Consensus 290 ~~~~~~~~~~~~y~~~~~i~~~~iPliiii~~Y~~I~~~lr~~~~~~~~~------------------------------ 339 (522)
.+...+..+...|.++.+++.+++|+++|+++|++|++.+|+++++.+..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (464)
T 4dkl_A 169 TFSHPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRNIFEMLRIDEGLRLKIYKNTEGYYTIGIGHLLTKSP 248 (464)
T ss_dssp CCSSSHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCCCCSHHHHHHHHHCCEEEEEECTTSCEEEETTEEEESSS
T ss_pred ecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhccccccccccccCCCCCccccccccccCCC
Confidence 55554444566777888888899999999999999999998765411000
Q ss_pred --------------------------------------------------------------------------------
Q psy17390 340 -------------------------------------------------------------------------------- 339 (522)
Q Consensus 340 -------------------------------------------------------------------------------- 339 (522)
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (464)
T 4dkl_A 249 SLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNS 328 (464)
T ss_dssp CSHHHHHHHHHHHSSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHTSCHHHHHHHHHHHHHHCHHHHHTCHHH
T ss_pred ccccccccccccccccccceecCCccccccccCCcccccccccCCCCCccccCcccccchhhhhccccCCCCCccccccc
Confidence
Q ss_pred ---------------------------------------ccCcchhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhh
Q psy17390 340 ---------------------------------------LLGQSSQSRARKKVAKMVSVLASSTLASTLSPYTSLVVCLG 380 (522)
Q Consensus 340 ---------------------------------------~~~~~~~~~~~~k~~k~l~iiv~~f~lc~w~P~~i~~l~~~ 380 (522)
.....+..++++|++|++++++++|++| |+|+.++.++..
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~k~l~~v~~~F~ic-w~P~~i~~l~~~ 407 (464)
T 4dkl_A 329 LRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYEKDRNLRRITRMVLVVVAVFIVC-WTPIHIYVIIKA 407 (464)
T ss_dssp HHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSTTTSCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred ccchhhcccchhhcccccccccccCccccceeeecccccccchhHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHH
Confidence 0001122356789999999999999999 999999988765
Q ss_pred cccCCcchhhHHHHHHHHHHHhhhhccCChhhhHHhHHHHhHHHHHHhhhh
Q psy17390 381 NISTGICSVVVHLAVNYNMMSPWCHSIVPPVEDSTLALALGFHQIQSFTKL 431 (522)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~l~~~ns~lNPiIY~~iy~~~~~~~~~~frk~ 431 (522)
..... ..........+..++.++||++||+||.+.. ..+|++|+|.
T Consensus 408 ~~~~~-~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~----~~fR~~~~~l 453 (464)
T 4dkl_A 408 LITIP-ETTFQTVSWHFCIALGYTNSCLNPVLYAFLD----ENFKRCFREF 453 (464)
T ss_dssp HSCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----HHHHHHHHHH
T ss_pred HhcCC-ccccchhHHHHHHHHHHhhhchhHHHHHHhh----HHHHHHHHHH
Confidence 43322 2233344556788899999999999775554 4455555664
No 6
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=100.00 E-value=6e-40 Score=347.16 Aligned_cols=288 Identities=17% Similarity=0.244 Sum_probs=229.8
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHhhhccCCCCchhHHhHHHHHHHHHHHhcchhhhhhhhcccccccccccchhhhhh
Q psy17390 133 LLKLTLTQFSELPFGVLGNGTLVLIFARHKNMRSVPNTYILSLALGDLLVIICGVPFTSTLYTLESWPYGPHICKLSEAT 212 (522)
Q Consensus 133 ~~~~~ii~~ii~llgi~gN~lVi~vi~~~r~lr~~~~~li~nLAvaDll~~l~~lp~~i~~~~~~~~~~~~~~C~~~~~l 212 (522)
..++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.+++.+|..+.....+.|.++...|++..++
T Consensus 23 ~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~ 102 (467)
T 3uon_A 23 VVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLAL 102 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhHHHHH
Confidence 45678888999999999999999999999999999999999999999999999999999888889999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhhccccccc-cCCchhhhhhHHHHHHHHHHHHHHHhhhccccccccCCCceEEecCCC
Q psy17390 213 RDISIGVSVFTLTALSAERYCAIVNPIRSHI-SSKPLTIVTAFAIWVLAIILALPSALFSHVQPATTASNDTIYFCSPFP 291 (522)
Q Consensus 213 ~~~~~~~Si~~L~~ISidRy~aI~~Pl~y~~-~t~r~~~~~i~~iWl~s~l~alp~~~~~~~~~~~~~~~~~~~~C~~~~ 291 (522)
..++..+|++++++||+|||+||++|++|+. .+++++..+++++|++++++++|+++.+...... .......|...+
T Consensus 103 ~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~--~~~~~~~C~~~~ 180 (467)
T 3uon_A 103 DYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGV--RTVEDGECYIQF 180 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC--CCCCSSCCCCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--cCCCCCcceeec
Confidence 9999999999999999999999999999886 8999999999999999999999998876554322 112224576432
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC--------------------------------
Q psy17390 292 IEYGQQYKQTVVLCKFLAYYLGPLCVIACFYILMARHLELSTRNMPGE-------------------------------- 339 (522)
Q Consensus 292 ~~~~~~~~~~y~~~~~i~~~~iPliiii~~Y~~I~~~lr~~~~~~~~~-------------------------------- 339 (522)
. ....|.++..++.+++|+++|+++|++|++.+|++.++.+..
T Consensus 181 ~-----~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (467)
T 3uon_A 181 F-----SNAAVTFGTAIAAFYLPVIIMTVLYWHISRASKSRINIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSL 255 (467)
T ss_dssp G-----GSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHSCCEEEEEECTTSCEEEETTEECCCCSSH
T ss_pred C-----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhhcccccceeeccchhhcccccCcccccCCcc
Confidence 2 233567777788899999999999999999999875421100
Q ss_pred ---------------c----------------------------------------------------------------
Q psy17390 340 ---------------L---------------------------------------------------------------- 340 (522)
Q Consensus 340 ---------------~---------------------------------------------------------------- 340 (522)
.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (467)
T 3uon_A 256 NAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLR 335 (467)
T ss_dssp HHHHHHHHHHHSSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHHHHHHGGGHHHHH
T ss_pred cccccccccccccCCCCcccccccccccccccchhhcccccCCCCCccccccccccccccccceeeccccCCCccccccc
Confidence 0
Q ss_pred --------------------------------------cCcchhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcc
Q psy17390 341 --------------------------------------LGQSSQSRARKKVAKMVSVLASSTLASTLSPYTSLVVCLGNI 382 (522)
Q Consensus 341 --------------------------------------~~~~~~~~~~~k~~k~l~iiv~~f~lc~w~P~~i~~l~~~~~ 382 (522)
....+..++++|++|++++++++|++| |+|+.++.++....
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~ic-w~P~~i~~~~~~~~ 414 (467)
T 3uon_A 336 MLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYPPPSREKKVTRTILAILLAFIIT-WAPYNVMVLINTFC 414 (467)
T ss_dssp HHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSTTSCCCSSCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHC
T ss_pred hhhhcCccccccccccccccCCCCcccccccchhhcccccccccchHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHH
Confidence 000000124589999999999999999 99999998887554
Q ss_pred cCCcchhhHHHHHHHHHHHhhhhccCChhhhHHhHHHHhHHHHHHhhhhcCccc
Q psy17390 383 STGICSVVVHLAVNYNMMSPWCHSIVPPVEDSTLALALGFHQIQSFTKLSSVYT 436 (522)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~l~~~ns~lNPiIY~~iy~~~~~~~~~~frk~~~~~~ 436 (522)
... .......+..++.++||++||+|| ..+...+|++|++.++|..
T Consensus 415 ~~~----~~~~~~~i~~~L~~~ns~~NPiIY----~~~~~~fR~~~~~ll~c~~ 460 (467)
T 3uon_A 415 APC----IPNTVWTIGYWLCYINSTINPACY----ALCNATFKKTFKHLLMCHY 460 (467)
T ss_dssp STT----SCHHHHHHHHHHHHHTTTHHHHHH----HHHCHHHHHHHHHHCC---
T ss_pred hcc----cchHHHHHHHHHHHHhhhhhhHHH----HHcCHHHHHHHHHHHhhhc
Confidence 322 124455678889999999999966 5555666667777776544
No 7
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=100.00 E-value=1e-38 Score=327.22 Aligned_cols=290 Identities=21% Similarity=0.273 Sum_probs=229.1
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHhhhccCCCCchhHHhHHHHHHHHHHHhcchhhhhhhhcccccccccccchhhhhh
Q psy17390 133 LLKLTLTQFSELPFGVLGNGTLVLIFARHKNMRSVPNTYILSLALGDLLVIICGVPFTSTLYTLESWPYGPHICKLSEAT 212 (522)
Q Consensus 133 ~~~~~ii~~ii~llgi~gN~lVi~vi~~~r~lr~~~~~li~nLAvaDll~~l~~lp~~i~~~~~~~~~~~~~~C~~~~~l 212 (522)
..++.+++.+++++|++||+++++++.++|++|+++|++++|||++|++.+++.+|..+.....+.|.+++..|++..++
T Consensus 32 ~~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~ 111 (364)
T 2ks9_A 32 IVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFF 111 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhHHHH
Confidence 34557888999999999999999999999999999999999999999999998899888877778999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhhccccccccCCchhhhhhHHHHHHHHHHHHHHHhhhccccccccCCCceEEecCCCc
Q psy17390 213 RDISIGVSVFTLTALSAERYCAIVNPIRSHISSKPLTIVTAFAIWVLAIILALPSALFSHVQPATTASNDTIYFCSPFPI 292 (522)
Q Consensus 213 ~~~~~~~Si~~L~~ISidRy~aI~~Pl~y~~~t~r~~~~~i~~iWl~s~l~alp~~~~~~~~~~~~~~~~~~~~C~~~~~ 292 (522)
..++..+|++++++||+|||+||++|++|+ .+++++..+++++|++++++++|.++....... .....|...+.
T Consensus 112 ~~~~~~~s~~~l~~isidRy~aI~~P~~~~-~~~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~-----~~~~~C~~~~~ 185 (364)
T 2ks9_A 112 PIAAVFASIYSMTAVAFDRYMAIIHPLQPR-LSATATKVVICVIWVLALLLAFPQGYYSTTETM-----PSRVVCMIEWP 185 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCTTS-CCHHHHHHHHHHHHHHHHHHHTTTTTTSCCCBC-----TTCSSBCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccc-cccchHHHHHHHHHHHHHHHHhHHHHHhhheec-----CCCCEEeecCC
Confidence 999999999999999999999999999987 688889999999999999999988765433221 12346875443
Q ss_pred cc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccCcchhHHHHHHHHHHHHHHHHHHHHhhhHH
Q psy17390 293 EY-GQQYKQTVVLCKFLAYYLGPLCVIACFYILMARHLELSTRNMPGELLGQSSQSRARKKVAKMVSVLASSTLASTLSP 371 (522)
Q Consensus 293 ~~-~~~~~~~y~~~~~i~~~~iPliiii~~Y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~k~~k~l~iiv~~f~lc~w~P 371 (522)
.. +..+...|.+...++.+++|+++++++|.+|++.+|+++++.+. ..+.+++.++++|++|++++++++|++| |+|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~~~~~~~-~~~~~~~~~~~~k~~~~~~~v~~~f~~~-~~P 263 (364)
T 2ks9_A 186 EHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDS-SDRYHEQVSAKRKVVKMMIVVVCTFAIC-WLP 263 (364)
T ss_dssp CCCTTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCSCCCSSSS-SSCSSHHHHHHHHHHHHHHHHHHHHHHH-HHH
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-chhhhhhHHhhhhHHHHHHHHHHHHHHH-HHH
Confidence 32 23345667777788889999999999999999999876543322 2233455677899999999999999999 999
Q ss_pred HHHHHHHhhcccCCcchhhHHHHHHHHHHHhhhhccCChhhhHHhHHHHhHHHHHHhhhhcCc
Q psy17390 372 YTSLVVCLGNISTGICSVVVHLAVNYNMMSPWCHSIVPPVEDSTLALALGFHQIQSFTKLSSV 434 (522)
Q Consensus 372 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~lNPiIY~~iy~~~~~~~~~~frk~~~~ 434 (522)
+.++.++..................+..++.++||++||+||.+.... +|++++|.+++
T Consensus 264 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~----fR~~~~~~~~~ 322 (364)
T 2ks9_A 264 FHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDR----FRLGFKHAFRC 322 (364)
T ss_dssp HHHHHHHHHHSTTSCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHCHH----HHHHHHHHHSS
T ss_pred HHHHHHHHHhCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH----HHHHHHHHHhh
Confidence 999887764332221112223344567778899999999977555544 44555555543
No 8
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=323.89 Aligned_cols=279 Identities=19% Similarity=0.325 Sum_probs=221.7
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHhhhccCCCCchhHHhHHHHHHHHHHHhcchhhhhhhhcccccccccccchhhhhh
Q psy17390 133 LLKLTLTQFSELPFGVLGNGTLVLIFARHKNMRSVPNTYILSLALGDLLVIICGVPFTSTLYTLESWPYGPHICKLSEAT 212 (522)
Q Consensus 133 ~~~~~ii~~ii~llgi~gN~lVi~vi~~~r~lr~~~~~li~nLAvaDll~~l~~lp~~i~~~~~~~~~~~~~~C~~~~~l 212 (522)
..++.+++.+++++|++||+++++++.++|++|+++|+|++|||++|+++++ .+|+.+.... .+|..|+..|+...++
T Consensus 11 ~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l-~~p~~~~~~~-~~~~~~~~~c~~~~~~ 88 (296)
T 2lnl_A 11 KYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWAASKV-NGWIFGTFLCKVVSLL 88 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHH-HHHHHHHHHH-SSSCCSSHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHH-hhhHHHhhcc-CCCccchhHHHHHhhh
Confidence 3466788899999999999999999999999999999999999999999987 5676665444 5699999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhhccccccccCCchhhhhhHHHHHHHHHHHHHHHhhhccccccccCCCceEEecCCCc
Q psy17390 213 RDISIGVSVFTLTALSAERYCAIVNPIRSHISSKPLTIVTAFAIWVLAIILALPSALFSHVQPATTASNDTIYFCSPFPI 292 (522)
Q Consensus 213 ~~~~~~~Si~~L~~ISidRy~aI~~Pl~y~~~t~r~~~~~i~~iWl~s~l~alp~~~~~~~~~~~~~~~~~~~~C~~~~~ 292 (522)
..++..+|++++++||+|||+||++|++|+...++++..+++++|+++++.++|+.+......... ....|.....
T Consensus 89 ~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~~~~W~~s~~~~~p~~~~~~~~~~~~----~~~~~~~~~~ 164 (296)
T 2lnl_A 89 KEVNFYSGILLLACISVDRYLAIVHATRTLTQKRHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNN----SSPVCYEVLG 164 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSSCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCCCCT----TSCCCCSCCS
T ss_pred hhhhHHHHHHHHHHHHhhhhhhhhhccccchhhhhhhHheehHHHHHHHHHhcchhhcceeecCCC----CCceeeeecc
Confidence 999999999999999999999999999988766677788889999999999999988776654321 1122332222
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccCcchhHHHHHHHHHHHHHHHHHHHHhhhHHH
Q psy17390 293 EYGQQYKQTVVLCKFLAYYLGPLCVIACFYILMARHLELSTRNMPGELLGQSSQSRARKKVAKMVSVLASSTLASTLSPY 372 (522)
Q Consensus 293 ~~~~~~~~~y~~~~~i~~~~iPliiii~~Y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~k~~k~l~iiv~~f~lc~w~P~ 372 (522)
.........+.+....+.+++|+.++..+|.++.+.++++ ..++++|++|++++++++|++| |+|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~~~-------------~~~~~~k~~~~~~~v~~~f~ic-w~P~ 230 (296)
T 2lnl_A 165 NDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKA-------------HMGQKHRAMRVIFAVVLIFLLC-WLPY 230 (296)
T ss_dssp CCTTTTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSSSC-------------CCHHHHTHHHHHHHHHHHHHHH-HHHH
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------hhhhhhhHHHHHHHhhhheeee-ehHH
Confidence 2333445567777778889999999999999987766543 2345778999999999999999 9999
Q ss_pred HHHHHHhhcccCCcc------hhhHHHHHHHHHHHhhhhccCChhhhHHhHHHHhHHHHHHhhhhcCcc
Q psy17390 373 TSLVVCLGNISTGIC------SVVVHLAVNYNMMSPWCHSIVPPVEDSTLALALGFHQIQSFTKLSSVY 435 (522)
Q Consensus 373 ~i~~l~~~~~~~~~~------~~~~~~~~~~~~~l~~~ns~lNPiIY~~iy~~~~~~~~~~frk~~~~~ 435 (522)
.+..+.......... ......+..+..+++++||++||+|| ..+.+.+|++|+|.+||+
T Consensus 231 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY----~~~~~~fR~~~~~ll~cr 295 (296)
T 2lnl_A 231 NLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIY----AFIGQNFRHGFLKILAMH 295 (296)
T ss_dssp HHHHHHHHHTCSSSCSCHHHHHHHTTHHHHHHHHHGGGGGTHHHHHH----HHHCSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhccccCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHH----HhcCHHHHHHHHHHhcCC
Confidence 999887644332211 12223455678889999999999966 555666677778888765
No 9
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=100.00 E-value=1.2e-39 Score=348.26 Aligned_cols=195 Identities=25% Similarity=0.441 Sum_probs=169.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHhhhccCCCCchhHHhHHHHHHHHHHHhcchhhhhhhhcccccccccccchhhhh
Q psy17390 132 KLLKLTLTQFSELPFGVLGNGTLVLIFARHKNMRSVPNTYILSLALGDLLVIICGVPFTSTLYTLESWPYGPHICKLSEA 211 (522)
Q Consensus 132 ~~~~~~ii~~ii~llgi~gN~lVi~vi~~~r~lr~~~~~li~nLAvaDll~~l~~lp~~i~~~~~~~~~~~~~~C~~~~~ 211 (522)
...++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|++++ +.+|+.+.... ..|.++...|++..+
T Consensus 47 ~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~-~~~~~~~~~C~~~~~ 124 (502)
T 3odu_A 47 NKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAV-ANWYFGNFLCKAVHV 124 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHH-TCCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHh-cCCcCCchhhhhHHH
Confidence 3567788899999999999999999999999999999999999999999996 47888776555 479999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHhhccccccc-cCCchhhhhhHHHHHHHHHHHHHHHhhhccccccccCCCceEEecCC
Q psy17390 212 TRDISIGVSVFTLTALSAERYCAIVNPIRSHI-SSKPLTIVTAFAIWVLAIILALPSALFSHVQPATTASNDTIYFCSPF 290 (522)
Q Consensus 212 l~~~~~~~Si~~L~~ISidRy~aI~~Pl~y~~-~t~r~~~~~i~~iWl~s~l~alp~~~~~~~~~~~~~~~~~~~~C~~~ 290 (522)
+..++..+|++++++||+|||+||++|++|+. .+++++..+++++|++++++++|+++.......+ +...|...
T Consensus 125 ~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~-----~~~~C~~~ 199 (502)
T 3odu_A 125 IYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEAD-----DRYICDRF 199 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEEEEECS-----SSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHHHHHHHHHHHHHheeeeccC-----CceEEeec
Confidence 99999999999999999999999999999887 8888999999999999999999999877655422 33678754
Q ss_pred CcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q psy17390 291 PIEYGQQYKQTVVLCKFLAYYLGPLCVIACFYILMARHLELSTRN 335 (522)
Q Consensus 291 ~~~~~~~~~~~y~~~~~i~~~~iPliiii~~Y~~I~~~lr~~~~~ 335 (522)
+.. ......|.+...++.+++|+++|+++|++|++.+|++.++
T Consensus 200 ~~~--~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~ 242 (502)
T 3odu_A 200 YPN--DLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSN 242 (502)
T ss_dssp CSS--HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHGGGCSCC
T ss_pred CCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 432 3455667777788889999999999999999999996654
No 10
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=100.00 E-value=1.9e-38 Score=322.48 Aligned_cols=290 Identities=17% Similarity=0.211 Sum_probs=232.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHhhhccCCCCchhHHhHHHHHHHHHHHhcchhhhhhhhcccccccccccchhhh
Q psy17390 131 RKLLKLTLTQFSELPFGVLGNGTLVLIFARHKNMRSVPNTYILSLALGDLLVIICGVPFTSTLYTLESWPYGPHICKLSE 210 (522)
Q Consensus 131 ~~~~~~~ii~~ii~llgi~gN~lVi~vi~~~r~lr~~~~~li~nLAvaDll~~l~~lp~~i~~~~~~~~~~~~~~C~~~~ 210 (522)
....++.+++.+++++|++||+++++++.+++++|+++|++++|||++|++.++..+|..+.....+.|.+++..|++..
T Consensus 36 ~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~ 115 (349)
T 1u19_A 36 WQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEG 115 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHHHHHH
Confidence 34557788889999999999999999999999999999999999999999999988998888777788999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhhccccccccCCchhhhhhHHHHHHHHHHHHHHHhhhccccccccCCCceEEecCC
Q psy17390 211 ATRDISIGVSVFTLTALSAERYCAIVNPIRSHISSKPLTIVTAFAIWVLAIILALPSALFSHVQPATTASNDTIYFCSPF 290 (522)
Q Consensus 211 ~l~~~~~~~Si~~L~~ISidRy~aI~~Pl~y~~~t~r~~~~~i~~iWl~s~l~alp~~~~~~~~~~~~~~~~~~~~C~~~ 290 (522)
++..++..+|++++++||+|||+||++|+++++.+++++..+++++|+++++.++|+++.+...... . ....|...
T Consensus 116 ~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~--~--~~~~C~~~ 191 (349)
T 1u19_A 116 FFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPE--G--MQCSCGID 191 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCCCCHHHHHHHHHHHHHHHHHHHSGGGTTSSCCEEE--T--TTTEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheeeCCccceeeccchhHHHHHHHHHHHHHHHHHHHHheeeeecc--C--Cceeeccc
Confidence 9999999999999999999999999999998878889999999999999999999998866443221 1 12467654
Q ss_pred Cccc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccCcchhHHHHHHHHHHHHHHHHHHHHhhh
Q psy17390 291 PIEY-GQQYKQTVVLCKFLAYYLGPLCVIACFYILMARHLELSTRNMPGELLGQSSQSRARKKVAKMVSVLASSTLASTL 369 (522)
Q Consensus 291 ~~~~-~~~~~~~y~~~~~i~~~~iPliiii~~Y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~k~~k~l~iiv~~f~lc~w 369 (522)
+... +......|.+...++.+++|+++++++|.+|++++|++.++.+ .+++..++++|.+|++++++++|++| |
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~f~i~-~ 266 (349)
T 1u19_A 192 YYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQ----ESATTQKAEKEVTRMVIIMVIAFLIC-W 266 (349)
T ss_dssp CSCCCGGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCSSC----SSSHHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred ccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc----cchhhHHHHHHHHHHHHHHHHHHHHH-H
Confidence 3322 2234566777777888999999999999999999988765432 22445677889999999999999999 9
Q ss_pred HHHHHHHHHhhcccCCcchhhHHHHHHHHHHHhhhhccCChhhhHHhHHHHhHHHHHHhhhhcCccc
Q psy17390 370 SPYTSLVVCLGNISTGICSVVVHLAVNYNMMSPWCHSIVPPVEDSTLALALGFHQIQSFTKLSSVYT 436 (522)
Q Consensus 370 ~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~lNPiIY~~iy~~~~~~~~~~frk~~~~~~ 436 (522)
+|+.+..+.......... ......+..++.++||++||+||.+ +...+|++++|.++|+.
T Consensus 267 ~P~~i~~~~~~~~~~~~~---~~~~~~~~~~l~~~ns~~nPiiY~~----~~~~fR~~~~~~~~c~~ 326 (349)
T 1u19_A 267 LPYAGVAFYIFTHQGSDF---GPIFMTIPAFFAKTSAVYNPVIYIM----MNKQFRNCMVTTLCCGK 326 (349)
T ss_dssp HHHHHHHHHHHHTTTSCC---CHHHHHHHHHHGGGGGTHHHHHHHH----TCHHHHHHHHHHHTSSC
T ss_pred HHHHHHhHhheecCCccc---chHHHHHHHHHHHHHHHHhHHHHHH----HhHHHHHHHHHHhcccC
Confidence 999988776543222111 1234456778899999999996644 44555566677665543
No 11
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=100.00 E-value=3.6e-39 Score=322.48 Aligned_cols=291 Identities=16% Similarity=0.203 Sum_probs=227.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHhhhccCCCCchhHHhHHHHHHHHHHHhcchhhhhhhhcccccccccccchhhh
Q psy17390 131 RKLLKLTLTQFSELPFGVLGNGTLVLIFARHKNMRSVPNTYILSLALGDLLVIICGVPFTSTLYTLESWPYGPHICKLSE 210 (522)
Q Consensus 131 ~~~~~~~ii~~ii~llgi~gN~lVi~vi~~~r~lr~~~~~li~nLAvaDll~~l~~lp~~i~~~~~~~~~~~~~~C~~~~ 210 (522)
.......+++.+++++|++||+++++++.+++++|+++|++++|||++|++.+++.+|..+.....+.|.+|+..|++..
T Consensus 9 ~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 88 (315)
T 4amj_A 9 QWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWT 88 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHHHHHH
Confidence 34556788889999999999999999999999999999999999999999999989999888888899999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhhccccccc-cCCchhhhhhHHHHHHHHHHHHHHHhhhccccccccCCCceEEecC
Q psy17390 211 ATRDISIGVSVFTLTALSAERYCAIVNPIRSHI-SSKPLTIVTAFAIWVLAIILALPSALFSHVQPATTASNDTIYFCSP 289 (522)
Q Consensus 211 ~l~~~~~~~Si~~L~~ISidRy~aI~~Pl~y~~-~t~r~~~~~i~~iWl~s~l~alp~~~~~~~~~~~~~~~~~~~~C~~ 289 (522)
++..++..+|++++++||+|||+||++|++|+. .+++++..+++++|++++++++|+++........ .....|..
T Consensus 89 ~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~----~~~~~c~~ 164 (315)
T 4amj_A 89 SLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDED----PQALKCYQ 164 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCS----HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHhccccC----CCcccccc
Confidence 999999999999999999999999999999886 8999999999999999999998888754433211 11234543
Q ss_pred CCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccC--cchhHHHHHHHHHHHHHHHHHHHHh
Q psy17390 290 FPIEYGQQYKQTVVLCKFLAYYLGPLCVIACFYILMARHLELSTRNMPGELLG--QSSQSRARKKVAKMVSVLASSTLAS 367 (522)
Q Consensus 290 ~~~~~~~~~~~~y~~~~~i~~~~iPliiii~~Y~~I~~~lr~~~~~~~~~~~~--~~~~~~~~~k~~k~l~iiv~~f~lc 367 (522)
.+...+......|.....++.+++|+++++++|.+|++.+|++.++.+....+ ++...++++|.++++++++++|++|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~f~i~ 244 (315)
T 4amj_A 165 DPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKTSRVMLMREHKALKTLGIIMGVFTLC 244 (315)
T ss_dssp CTTCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC------------CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhhhhhhhHHHHHHHHHHHHHHH
Confidence 33222223345667777788899999999999999999999887665443322 2233457889999999999999999
Q ss_pred hhHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHhhhhccCChhhhHHhHHHHhHHHHHHhhhhcCcc
Q psy17390 368 TLSPYTSLVVCLGNISTGICSVVVHLAVNYNMMSPWCHSIVPPVEDSTLALALGFHQIQSFTKLSSVY 435 (522)
Q Consensus 368 ~w~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~lNPiIY~~iy~~~~~~~~~~frk~~~~~ 435 (522)
|+|+.+..+........ .......+..++.++||++||+||. +...+|++++|.+++.
T Consensus 245 -~~P~~i~~~~~~~~~~~----~~~~~~~~~~~l~~~ns~~nPiiY~-----~~~~fR~~~~~~l~~~ 302 (315)
T 4amj_A 245 -WLPFFLVNIVNVFNRDL----VPDWLFVAFNWLGYANSAMNPIIYC-----RSPDFRKAFKRLLAFP 302 (315)
T ss_dssp -HHHHHHHHHHHHHCTTS----SCHHHHHHHHHHHHHGGGTHHHHGG-----GSHHHHHHHHHHHC--
T ss_pred -HHHHHHHHHHHHhcCcc----chHHHHHHHHHHHHHhccccHHHHc-----CcHHHHHHHHHHhCCC
Confidence 99999998876443222 1123445667788899999999773 4566667777777653
No 12
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=100.00 E-value=5.3e-40 Score=345.58 Aligned_cols=298 Identities=16% Similarity=0.147 Sum_probs=224.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhccCCCCchhHHhHHHHHHHHHHHhcchhhhhhhhcccccccccccchhh
Q psy17390 130 LRKLLKLTLTQFSELPFGVLGNGTLVLIFARHKNMRSVPNTYILSLALGDLLVIICGVPFTSTLYTLESWPYGPHICKLS 209 (522)
Q Consensus 130 ~~~~~~~~ii~~ii~llgi~gN~lVi~vi~~~r~lr~~~~~li~nLAvaDll~~l~~lp~~i~~~~~~~~~~~~~~C~~~ 209 (522)
.....+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.+++.+|..+... ..|..+...|++.
T Consensus 28 ~~~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~--~~~~~~~~~C~~~ 105 (447)
T 4eiy_A 28 IMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHGCLFI 105 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHH--TTCEEEHHHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccCccHHHHH
Confidence 34455778888999999999999999999999999999999999999999999998999877633 4677788899999
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHhhccccccc-cCCchhhhhhHHHHHHHHHHHHHHHhhhccccccccCCCceEEec
Q psy17390 210 EATRDISIGVSVFTLTALSAERYCAIVNPIRSHI-SSKPLTIVTAFAIWVLAIILALPSALFSHVQPATTASNDTIYFCS 288 (522)
Q Consensus 210 ~~l~~~~~~~Si~~L~~ISidRy~aI~~Pl~y~~-~t~r~~~~~i~~iWl~s~l~alp~~~~~~~~~~~~~~~~~~~~C~ 288 (522)
.++..++..+|++++++||+|||+||++|++|+. .+++++..+++++|++++++++|+++.+...............|.
T Consensus 106 ~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 185 (447)
T 4eiy_A 106 ACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCG 185 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGGTCSSTTSCCHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHHHHHHHHHhhhheeccccccCcccccccccc
Confidence 9999999999999999999999999999999876 899999999999999999999999887655432211000111233
Q ss_pred CCCcc---cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC--------------------------
Q psy17390 289 PFPIE---YGQQYKQTVVLCKFLAYYLGPLCVIACFYILMARHLELSTRNMPGE-------------------------- 339 (522)
Q Consensus 289 ~~~~~---~~~~~~~~y~~~~~i~~~~iPliiii~~Y~~I~~~lr~~~~~~~~~-------------------------- 339 (522)
..+.. .+......+.++.+++.+++|+++|+++|++|++.+|++.++....
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (447)
T 4eiy_A 186 EGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLADLEDNWETLNDNLKVIEKADNAAQVKDALTK 265 (447)
T ss_dssp TTEEECCHHHHSCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHH
T ss_pred ccchhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHhccCcCcCCccccchhhhccchh
Confidence 21110 1112233444444566789999999999999999999874432110
Q ss_pred -------------------------------------------------------------------------ccCcchh
Q psy17390 340 -------------------------------------------------------------------------LLGQSSQ 346 (522)
Q Consensus 340 -------------------------------------------------------------------------~~~~~~~ 346 (522)
.....+.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (447)
T 4eiy_A 266 MRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLERARST 345 (447)
T ss_dssp HHHHHHHHHC---------------CHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHTHHHHHHHHHHH
T ss_pred hhccCCCCCCCCCCCCcCCCCCCcccccccCCCCCCCCccchhhhhcccCCcCcccchhhhhcccccchhhccccchhHH
Confidence 0000122
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHhhhhccCChhhhHHhHHHHhHHHHH
Q psy17390 347 SRARKKVAKMVSVLASSTLASTLSPYTSLVVCLGNISTGICSVVVHLAVNYNMMSPWCHSIVPPVEDSTLALALGFHQIQ 426 (522)
Q Consensus 347 ~~~~~k~~k~l~iiv~~f~lc~w~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~lNPiIY~~iy~~~~~~~~~ 426 (522)
.++++|++|++++++++|++| |+|+.++.++....... .........+..++.++||++||+||.+...-||..+++
T Consensus 346 ~~~~~r~~k~l~~vv~~F~ic-w~P~~i~~~~~~~~~~~--~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~ 422 (447)
T 4eiy_A 346 LQKEVHAAKSLAIIVGLFALC-WLPLHIINCFTFFCPDC--SHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRK 422 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCTTS--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhhhee-ccHHHHHHHHHHhcCcc--cccchHHHHHHHHHHHHHhccchhhhHhccHHHHHHHHH
Confidence 367889999999999999999 99999998876543321 122234556788899999999999776666666655544
Q ss_pred Hhhhhc
Q psy17390 427 SFTKLS 432 (522)
Q Consensus 427 ~frk~~ 432 (522)
.|++..
T Consensus 423 ~~~~~~ 428 (447)
T 4eiy_A 423 IIRSHV 428 (447)
T ss_dssp HHHHTC
T ss_pred HHHHHH
Confidence 444433
No 13
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=100.00 E-value=8e-38 Score=329.47 Aligned_cols=287 Identities=26% Similarity=0.387 Sum_probs=223.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhccCCCCchhHHhHHHHHHHHHHHhcchhhhhhhhcccccccccccchhh
Q psy17390 130 LRKLLKLTLTQFSELPFGVLGNGTLVLIFARHKNMRSVPNTYILSLALGDLLVIICGVPFTSTLYTLESWPYGPHICKLS 209 (522)
Q Consensus 130 ~~~~~~~~ii~~ii~llgi~gN~lVi~vi~~~r~lr~~~~~li~nLAvaDll~~l~~lp~~i~~~~~~~~~~~~~~C~~~ 209 (522)
.....++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|++. ++.+|..+.....+.|.++...|++.
T Consensus 122 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~~~~~~~~~C~~~ 200 (434)
T 4ea3_A 122 LGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLGFWPFGNALCKTV 200 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHTSCTTHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhcCCcCcccHHHHH
Confidence 34566778888999999999999999999999999999999999999999998 45789888888888899999999999
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHhhccccccc-cCCchhhhhhHHHHHHHHHHHHHHHhhhccccccccCCCceEEec
Q psy17390 210 EATRDISIGVSVFTLTALSAERYCAIVNPIRSHI-SSKPLTIVTAFAIWVLAIILALPSALFSHVQPATTASNDTIYFCS 288 (522)
Q Consensus 210 ~~l~~~~~~~Si~~L~~ISidRy~aI~~Pl~y~~-~t~r~~~~~i~~iWl~s~l~alp~~~~~~~~~~~~~~~~~~~~C~ 288 (522)
.++..++..+|++++++||+|||+||++|++|+. .+++++..+++++|++++++++|.++........ ....|.
T Consensus 201 ~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~-----~~~~c~ 275 (434)
T 4ea3_A 201 IAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAQVED-----EEIECL 275 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCS-----SCCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhHHHHHHhhHheeeeeEeec-----CceeEE
Confidence 9999999999999999999999999999999886 8999999999999999999999988765443221 224576
Q ss_pred CCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccCcchhHHHHHHHHHHHHHHHHHHHHhh
Q psy17390 289 PFPIEYGQQYKQTVVLCKFLAYYLGPLCVIACFYILMARHLELSTRNMPGELLGQSSQSRARKKVAKMVSVLASSTLAST 368 (522)
Q Consensus 289 ~~~~~~~~~~~~~y~~~~~i~~~~iPliiii~~Y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~k~~k~l~iiv~~f~lc~ 368 (522)
......+..+...|.+...++.+++|+++++++|.+|++.+|+++++. +..++.++++|+++++++++++|++|
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~vv~~F~i~- 349 (434)
T 4ea3_A 276 VEIPTPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLS-----GSREKDRNLRRITRLVLVVVAVFVGC- 349 (434)
T ss_dssp ECCCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCSSCS-----SCHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred EecCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-----cchhhHHHHhHHHHHHHHHHHHHHHH-
Confidence 544444445556777888888899999999999999999998765432 23455677889999999999999999
Q ss_pred hHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHhhhhccCChhhhHHhHHHHhHHHHHHhhhhcC
Q psy17390 369 LSPYTSLVVCLGNISTGICSVVVHLAVNYNMMSPWCHSIVPPVEDSTLALALGFHQIQSFTKLSS 433 (522)
Q Consensus 369 w~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~lNPiIY~~iy~~~~~~~~~~frk~~~ 433 (522)
|+|+.++.++....... ..........+..++.++||++||+||.+. ...+|+.++|.+|
T Consensus 350 w~P~~i~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~ns~lNPiIY~~~----~~~fR~~~~~~~~ 409 (434)
T 4ea3_A 350 WTPVQVFVLAQGLGVQP-SSETAVAILRFCTALGYVNSCLNPILYAFL----DENFKACFRKFCC 409 (434)
T ss_dssp HHHHHHHHHHHHTTCCC-CSHHHHHHHHHHHHHHHHHHHHHHHHHHHH----CHHHHHHHC----
T ss_pred HHHHHHHHHHHHhccCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhC
Confidence 99999988876432222 122233344566778899999999977544 4445555565554
No 14
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=100.00 E-value=4.5e-38 Score=339.34 Aligned_cols=187 Identities=20% Similarity=0.209 Sum_probs=156.0
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHhhhccCCCCchhHHhHHHHHHHHHHHhcchhhhhhhhcccccccccccchhhhhh
Q psy17390 133 LLKLTLTQFSELPFGVLGNGTLVLIFARHKNMRSVPNTYILSLALGDLLVIICGVPFTSTLYTLESWPYGPHICKLSEAT 212 (522)
Q Consensus 133 ~~~~~ii~~ii~llgi~gN~lVi~vi~~~r~lr~~~~~li~nLAvaDll~~l~~lp~~i~~~~~~~~~~~~~~C~~~~~l 212 (522)
..++.+++++++++|++||++|++++.+++++|+++|+|++|||++|++++++.+|..+.. ....|.++...|++..++
T Consensus 63 ~~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~~~~~~~~c~~~~~~ 141 (520)
T 3v2y_A 63 IKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS-GATTYKLTPAQWFLREGS 141 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGGTTSCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccceeeCccccchHHHH
Confidence 3678889999999999999999999999999999999999999999999999888877665 557789999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhhccccccc-cCCchhhhhhHHHHHHHHHHHHHHHhhhccccccccCCCceEEecCCC
Q psy17390 213 RDISIGVSVFTLTALSAERYCAIVNPIRSHI-SSKPLTIVTAFAIWVLAIILALPSALFSHVQPATTASNDTIYFCSPFP 291 (522)
Q Consensus 213 ~~~~~~~Si~~L~~ISidRy~aI~~Pl~y~~-~t~r~~~~~i~~iWl~s~l~alp~~~~~~~~~~~~~~~~~~~~C~~~~ 291 (522)
..++..+|+++|++||+|||+||+ |++|+. .+++++..+++++|++++++++|+++++.... +...|...+
T Consensus 142 ~~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~-------~~~~C~~~~ 213 (520)
T 3v2y_A 142 MFVALSASVFSLLAIAIERYITML-KMKLHNGSNNFRLFLLISACWVISLILGGLPIMGWNCIS-------ALSSCSTVL 213 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC-C-------CCHHHHHHHHHHHHHHHHHHHTTTTTCBCTT-------CGGGBCSSS
T ss_pred HHHHHHHHHHHHHHHHHHHhhEEe-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHeecccc-------CCCcccccC
Confidence 999999999999999999999999 999886 89999999999999999999999998776542 224687544
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy17390 292 IEYGQQYKQTVVLCKFLAYYLGPLCVIACFYILMARHLELST 333 (522)
Q Consensus 292 ~~~~~~~~~~y~~~~~i~~~~iPliiii~~Y~~I~~~lr~~~ 333 (522)
... ...|.++ .++.|++|+++|++||.+|++.+|++.
T Consensus 214 ~~~----~~~~~~~-~~~~~~lPl~ii~~~Y~~I~~~l~~~~ 250 (520)
T 3v2y_A 214 PLY----HKHYILF-CTTVFTLLLLSIVILYCRIYSLVRTRN 250 (520)
T ss_dssp TTB----BHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Ccc----chHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 322 2233333 345699999999999999999999875
No 15
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=336.28 Aligned_cols=188 Identities=22% Similarity=0.318 Sum_probs=161.4
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHhhhccCCCCchhHHhHHHHHHHHHHHhcchhhhhhhhcc-cccccccccchhhhh
Q psy17390 133 LLKLTLTQFSELPFGVLGNGTLVLIFARHKNMRSVPNTYILSLALGDLLVIICGVPFTSTLYTL-ESWPYGPHICKLSEA 211 (522)
Q Consensus 133 ~~~~~ii~~ii~llgi~gN~lVi~vi~~~r~lr~~~~~li~nLAvaDll~~l~~lp~~i~~~~~-~~~~~~~~~C~~~~~ 211 (522)
..++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|..+..... +.|.++...|++..+
T Consensus 38 ~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~ 117 (481)
T 3pbl_A 38 HAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFVT 117 (481)
T ss_dssp ---CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhhHHH
Confidence 4456778899999999999999999999999999999999999999999999899988876665 679999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHhhccccc---c-ccCCchhhhhhHHHHHHHHHHHHHHHhhhccccccccCCCceEEe
Q psy17390 212 TRDISIGVSVFTLTALSAERYCAIVNPIRS---H-ISSKPLTIVTAFAIWVLAIILALPSALFSHVQPATTASNDTIYFC 287 (522)
Q Consensus 212 l~~~~~~~Si~~L~~ISidRy~aI~~Pl~y---~-~~t~r~~~~~i~~iWl~s~l~alp~~~~~~~~~~~~~~~~~~~~C 287 (522)
+..++..+|++++++||+|||+||++|++| . ..+++++..+++++|++++++++|+++.+.... ....|
T Consensus 118 ~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~-------~~~~C 190 (481)
T 3pbl_A 118 LDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTTG-------DPTVC 190 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTTCCCS-------STTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHheecccC-------CCCcc
Confidence 999999999999999999999999999998 3 378889999999999999999999988665432 12357
Q ss_pred cCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q psy17390 288 SPFPIEYGQQYKQTVVLCKFLAYYLGPLCVIACFYILMARHLELSTRN 335 (522)
Q Consensus 288 ~~~~~~~~~~~~~~y~~~~~i~~~~iPliiii~~Y~~I~~~lr~~~~~ 335 (522)
.... ..|.++..++.+++|+++|+++|++|++.+|++.++
T Consensus 191 ~~~~--------~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~ 230 (481)
T 3pbl_A 191 SISN--------PDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRK 230 (481)
T ss_dssp SCCC--------HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred cccC--------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 5321 235566678889999999999999999999987654
No 16
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=333.22 Aligned_cols=287 Identities=15% Similarity=0.214 Sum_probs=222.9
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHhhhccCCCCchhHHhHHHHHHHHHHHhcchhhhhhhhcccccccccccchhhhhhh
Q psy17390 134 LKLTLTQFSELPFGVLGNGTLVLIFARHKNMRSVPNTYILSLALGDLLVIICGVPFTSTLYTLESWPYGPHICKLSEATR 213 (522)
Q Consensus 134 ~~~~ii~~ii~llgi~gN~lVi~vi~~~r~lr~~~~~li~nLAvaDll~~l~~lp~~i~~~~~~~~~~~~~~C~~~~~l~ 213 (522)
.++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.+++.+|..+.....+.|.++...|++..++.
T Consensus 9 ~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~ 88 (452)
T 3rze_A 9 MPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLSMD 88 (452)
T ss_dssp CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHHHHHH
Confidence 35667889999999999999999999999999999999999999999999999999999888899999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhccccccc-cCCchhhhhhHHHHHHHHHHHHHHHhhhccccccccCCCceEEecCCCc
Q psy17390 214 DISIGVSVFTLTALSAERYCAIVNPIRSHI-SSKPLTIVTAFAIWVLAIILALPSALFSHVQPATTASNDTIYFCSPFPI 292 (522)
Q Consensus 214 ~~~~~~Si~~L~~ISidRy~aI~~Pl~y~~-~t~r~~~~~i~~iWl~s~l~alp~~~~~~~~~~~~~~~~~~~~C~~~~~ 292 (522)
.++..+|++++++||+|||+||++|++|+. .+++++..+++++|++++++++|.+.+....... .......|...+.
T Consensus 89 ~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~--~~~~~~~C~~~~~ 166 (452)
T 3rze_A 89 YVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPILGWNHFMQQT--SVRREDKCETDFY 166 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHHCCCC---------CCSSSSCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccc--ccCCCCeecCCCc
Confidence 999999999999999999999999999876 8999999999999999999999866543332211 1112245653322
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCc--------------------------------
Q psy17390 293 EYGQQYKQTVVLCKFLAYYLGPLCVIACFYILMARHLELSTRNMPGEL-------------------------------- 340 (522)
Q Consensus 293 ~~~~~~~~~y~~~~~i~~~~iPliiii~~Y~~I~~~lr~~~~~~~~~~-------------------------------- 340 (522)
....|.++..++.+++|+++|+++|++|++.+|++.++.+...
T Consensus 167 -----~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (452)
T 3rze_A 167 -----DVTWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLN 241 (452)
T ss_dssp -----TCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHCEEEEEEECTTSCEEEEETEECSSCSSHH
T ss_pred -----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHhhhhhhhhhhhcccCCcccccccccccccCCCCC
Confidence 1334666777888999999999999999999987644310000
Q ss_pred --------------------------------------------------------------------------------
Q psy17390 341 -------------------------------------------------------------------------------- 340 (522)
Q Consensus 341 -------------------------------------------------------------------------------- 340 (522)
T Consensus 242 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (452)
T 3rze_A 242 AAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRM 321 (452)
T ss_dssp HHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHCHHHHTSCHHHHHH
T ss_pred cccccccCCCCCCCCccccCCcccchhcCCCcccccCcccccccCCcccCCCccccccccccccccCCCCCCccccCcch
Confidence
Q ss_pred -------------------------------------cCcchhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhccc
Q psy17390 341 -------------------------------------LGQSSQSRARKKVAKMVSVLASSTLASTLSPYTSLVVCLGNIS 383 (522)
Q Consensus 341 -------------------------------------~~~~~~~~~~~k~~k~l~iiv~~f~lc~w~P~~i~~l~~~~~~ 383 (522)
.......++++|++|++++++++|++| |+|+.++.++.....
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~vv~~f~ic-wlP~~i~~l~~~~~~ 400 (452)
T 3rze_A 322 LQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYLHMNRERKAAKQLGFIMAAFILC-WIPYFIFFMVIAFCK 400 (452)
T ss_dssp HHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSGGGCSCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHS
T ss_pred hhhcCCccccccccCCccCCCCCcccchhhhhhccccccchHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHhc
Confidence 000012347889999999999999999 999999888765433
Q ss_pred CCcchhhHHHHHHHHHHHhhhhccCChhhhHHhHHHHhHHHHHHhhhhcCccc
Q psy17390 384 TGICSVVVHLAVNYNMMSPWCHSIVPPVEDSTLALALGFHQIQSFTKLSSVYT 436 (522)
Q Consensus 384 ~~~~~~~~~~~~~~~~~l~~~ns~lNPiIY~~iy~~~~~~~~~~frk~~~~~~ 436 (522)
..... ....+..++.++||++||+||. .+...+|+++++.++++.
T Consensus 401 ~~~~~----~~~~~~~~L~~~ns~~NPiIY~----~~~~~fR~~~~~ll~~~~ 445 (452)
T 3rze_A 401 NCCNE----HLHMFTIWLGYINSTLNPLIYP----LCNENFKKTFKRILHIRS 445 (452)
T ss_dssp CCSCT----TTHHHHHHHHHHHHHHHHHHHH----HHCHHHHHHHHHHHTC--
T ss_pred ccccH----HHHHHHHHHHHHHhcccchhhh----hccHHHHHHHHHHHHhcc
Confidence 32221 1234677888999999999664 455566666677776544
No 17
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=100.00 E-value=5e-37 Score=324.29 Aligned_cols=289 Identities=20% Similarity=0.290 Sum_probs=225.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHhhhccCCCCchhHHhHHHHHHHHHHHhc-chhhhhhhhcccccccccccchhh
Q psy17390 131 RKLLKLTLTQFSELPFGVLGNGTLVLIFARHKNMRSVPNTYILSLALGDLLVIIC-GVPFTSTLYTLESWPYGPHICKLS 209 (522)
Q Consensus 131 ~~~~~~~ii~~ii~llgi~gN~lVi~vi~~~r~lr~~~~~li~nLAvaDll~~l~-~lp~~i~~~~~~~~~~~~~~C~~~ 209 (522)
....++.+++.+++++|++||+++++++.++|++|++.|++++|||++|++.+++ .+|..+.....+.|.++...|++.
T Consensus 32 ~~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 111 (448)
T 2z73_A 32 AVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVY 111 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCHHHHHHH
Confidence 4456778888999999999999999999999999999999999999999999986 488888777778899999999999
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHhhccccccc-cCCchhhhhhHHHHHHHHHHHHHHHhhhccccccccCCCceEEec
Q psy17390 210 EATRDISIGVSVFTLTALSAERYCAIVNPIRSHI-SSKPLTIVTAFAIWVLAIILALPSALFSHVQPATTASNDTIYFCS 288 (522)
Q Consensus 210 ~~l~~~~~~~Si~~L~~ISidRy~aI~~Pl~y~~-~t~r~~~~~i~~iWl~s~l~alp~~~~~~~~~~~~~~~~~~~~C~ 288 (522)
.++..++..+|++++++||+|||++|++|++|+. .+++++..+++++|++++++++++++.+...... .....|.
T Consensus 112 ~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~----~~~~~c~ 187 (448)
T 2z73_A 112 GFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLE----GVLCNCS 187 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGGTSSCEEEC----TTSSSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHHHHHHHHhceeeeeec----CCceeEe
Confidence 9999999999999999999999999999999876 8999999999999999999999988876544322 1223465
Q ss_pred CCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC----c----cCcchhHHHHHHHHHHHHHH
Q psy17390 289 PFPIEYGQQYKQTVVLCKFLAYYLGPLCVIACFYILMARHLELSTRNMPGE----L----LGQSSQSRARKKVAKMVSVL 360 (522)
Q Consensus 289 ~~~~~~~~~~~~~y~~~~~i~~~~iPliiii~~Y~~I~~~lr~~~~~~~~~----~----~~~~~~~~~~~k~~k~l~ii 360 (522)
..+...+ .....+.++..++.+++|+++++++|.+|++.+|++.++.+.. . +..++..++++|++|+++++
T Consensus 188 ~~~~~~~-~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~i 266 (448)
T 2z73_A 188 FDYISRD-STTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVI 266 (448)
T ss_dssp ECCSCCS-HHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhccccHHHHHHHHHHHH
Confidence 4332222 2344566666777899999999999999999998865432111 0 00112234688999999999
Q ss_pred HHHHHHhhhHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHhhhhccCChhhhHHhHHHHhHHHHHHh
Q psy17390 361 ASSTLASTLSPYTSLVVCLGNISTGICSVVVHLAVNYNMMSPWCHSIVPPVEDSTLALALGFHQIQSF 428 (522)
Q Consensus 361 v~~f~lc~w~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~lNPiIY~~iy~~~~~~~~~~f 428 (522)
+++|++| |+|+.++.++....... ........+..++.++||++||+||.+....||..+++.|
T Consensus 267 v~~F~i~-~~P~~i~~~~~~~~~~~---~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~ 330 (448)
T 2z73_A 267 VSQFLLS-WSPYAVVALLAQFGPLE---WVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTF 330 (448)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHSCGG---GCCHHHHHHHHHHHHHGGGSHHHHHHHHCHHHHHHHHHHC
T ss_pred HHHHHHH-hHHHHHHHHHHHhCCcc---cCChHHHHHHHHHHHHHHhhcchHHHHhhHHHHHHHHHHH
Confidence 9999999 99999988776432211 1122344567788899999999977666555555443333
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=100.00 E-value=8.9e-38 Score=336.33 Aligned_cols=291 Identities=15% Similarity=0.201 Sum_probs=224.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHhhhccCCCCchhHHhHHHHHHHHHHHhcchhhhhhhhcccccccccccchhhhh
Q psy17390 132 KLLKLTLTQFSELPFGVLGNGTLVLIFARHKNMRSVPNTYILSLALGDLLVIICGVPFTSTLYTLESWPYGPHICKLSEA 211 (522)
Q Consensus 132 ~~~~~~ii~~ii~llgi~gN~lVi~vi~~~r~lr~~~~~li~nLAvaDll~~l~~lp~~i~~~~~~~~~~~~~~C~~~~~ 211 (522)
...++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|..+.....+.|.++...|++..+
T Consensus 181 ~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 260 (514)
T 3sn6_R 181 WVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTS 260 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchhhhHHH
Confidence 34567888899999999999999999999999999999999999999999999999999888888899999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHhhccccccc-cCCchhhhhhHHHHHHHHHHHHHHHhhhccccccccCCCceEEecCC
Q psy17390 212 TRDISIGVSVFTLTALSAERYCAIVNPIRSHI-SSKPLTIVTAFAIWVLAIILALPSALFSHVQPATTASNDTIYFCSPF 290 (522)
Q Consensus 212 l~~~~~~~Si~~L~~ISidRy~aI~~Pl~y~~-~t~r~~~~~i~~iWl~s~l~alp~~~~~~~~~~~~~~~~~~~~C~~~ 290 (522)
+..++..+|++++++||+|||++|++|++|+. .+++++..+++++|++++++++++++........ .....|...
T Consensus 261 l~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~~~----~~~~~c~~~ 336 (514)
T 3sn6_R 261 IDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATH----QEAINCYAE 336 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC-------CHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHHHhhhhhccceeccc----Ccccceeec
Confidence 99999999999999999999999999999887 8999999999999999999997766543222111 111234322
Q ss_pred CcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC---------------------ccCcchhHHH
Q psy17390 291 PIEYGQQYKQTVVLCKFLAYYLGPLCVIACFYILMARHLELSTRNMPGE---------------------LLGQSSQSRA 349 (522)
Q Consensus 291 ~~~~~~~~~~~y~~~~~i~~~~iPliiii~~Y~~I~~~lr~~~~~~~~~---------------------~~~~~~~~~~ 349 (522)
....+......|.++..++.+++|+++|+++|.+|++.+|++.++.+.. .+..++..++
T Consensus 337 ~~~~~~~~~~~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (514)
T 3sn6_R 337 ETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGRFHVQNLSQVEQDGRTGHGLRRSSKFCLK 416 (514)
T ss_dssp SSCCCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------------------------CHH
T ss_pred ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhhhHH
Confidence 2111122345677777788899999999999999999998764332110 0111222357
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcccCCcchhhHHHHHHHHHHHhhhhccCChhhhHHhHHHHhHHHHHHhh
Q psy17390 350 RKKVAKMVSVLASSTLASTLSPYTSLVVCLGNISTGICSVVVHLAVNYNMMSPWCHSIVPPVEDSTLALALGFHQIQSFT 429 (522)
Q Consensus 350 ~~k~~k~l~iiv~~f~lc~w~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~lNPiIY~~iy~~~~~~~~~~fr 429 (522)
++|.++++++++++|++| |+|+.++.++........ ......+..++.++||++||+||. +...+|+.++
T Consensus 417 ~~r~~~~l~~iv~~F~lc-wlP~~i~~~~~~~~~~~~----~~~~~~~~~~l~~~ns~~NPiIY~-----~~~~fR~~~~ 486 (514)
T 3sn6_R 417 EHKALKTLGIIMGTFTLC-WLPFFIVNIVHVIQDNLI----RKEVYILLNWIGYVNSGFNPLIYC-----RSPDFRIAFQ 486 (514)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHSTTSS----CHHHHHHHHHHHHHHHHHHHHHHT-----TCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHccccc----chHHHHHHHHHHHHHHhhhHHhhc-----CCHHHHHHHH
Confidence 789999999999999999 999999888764422211 123445677888999999999772 4566777778
Q ss_pred hhcCccc
Q psy17390 430 KLSSVYT 436 (522)
Q Consensus 430 k~~~~~~ 436 (522)
+.+|++.
T Consensus 487 ~~l~~~~ 493 (514)
T 3sn6_R 487 ELLCLRR 493 (514)
T ss_dssp TTCC---
T ss_pred HHhCcCc
Confidence 7776543
No 19
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.30 E-value=2.1e-07 Score=59.50 Aligned_cols=29 Identities=28% Similarity=0.465 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHhhccccccc-cCCc
Q psy17390 219 VSVFTLTALSAERYCAIVNPIRSHI-SSKP 247 (522)
Q Consensus 219 ~Si~~L~~ISidRy~aI~~Pl~y~~-~t~r 247 (522)
+|+++|++||+|||+||++|++|+. .+++
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t~~ 31 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRTPR 31 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 6899999999999999999999876 5544
No 20
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=97.46 E-value=4.1e-05 Score=51.26 Aligned_cols=33 Identities=15% Similarity=0.118 Sum_probs=22.6
Q ss_pred HHHHHHhhhhccCChhhhHHhHHHHhHHHHHHhhhhc
Q psy17390 396 NYNMMSPWCHSIVPPVEDSTLALALGFHQIQSFTKLS 432 (522)
Q Consensus 396 ~~~~~l~~~ns~lNPiIY~~iy~~~~~~~~~~frk~~ 432 (522)
.+..+++++||++||+||++.. ..+|+.+++.+
T Consensus 4 ~~~~~l~~~ns~lNPiIY~~~~----~~fr~~~~~~~ 36 (40)
T 2koe_A 4 AFASMLCLLNSTVNPIIYALRS----KDLRHAFRSMF 36 (40)
T ss_dssp HHHHHHHHHHHHSSTTTTBTTB----HHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHcc----HHHHHHHHHHh
Confidence 4567788999999999885554 33444445544
No 21
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=96.88 E-value=5.8e-05 Score=48.33 Aligned_cols=28 Identities=18% Similarity=0.235 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHh
Q psy17390 351 KKVAKMVSVLASSTLASTLSPYTSLVVCL 379 (522)
Q Consensus 351 ~k~~k~l~iiv~~f~lc~w~P~~i~~l~~ 379 (522)
+|.+|++++++++|++| |+||++..++.
T Consensus 2 ~k~~k~l~~vv~~F~ic-W~P~~i~~~~~ 29 (33)
T 2ki9_A 2 VRLAKTLGLVLAVLLIC-WFPVLALMAHS 29 (33)
T ss_dssp CSSSSHHHHHHHHHTTT-SSHHHHHHTTT
T ss_pred chhhhhHHHHHHHHHHH-HhHHHHHHHHH
Confidence 46788999999999999 99999987653
No 22
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=95.34 E-value=0.0019 Score=47.71 Aligned_cols=31 Identities=19% Similarity=0.280 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHhhhccCCC
Q psy17390 135 KLTLTQFSELPFGVLGNGTLVLIFARHKNMR 165 (522)
Q Consensus 135 ~~~ii~~ii~llgi~gN~lVi~vi~~~r~lr 165 (522)
+++++|++++++|++||++|++++.++|..+
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~~~ 60 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKGHH 60 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSSSC
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEecccc
Confidence 5778899999999999999999999877643
No 23
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=90.66 E-value=3.4 Score=42.11 Aligned_cols=40 Identities=15% Similarity=-0.101 Sum_probs=32.9
Q ss_pred HHHHhhhhccCChhhhHHhHHHHhHHHHHHhhhhcCcccc
Q psy17390 398 NMMSPWCHSIVPPVEDSTLALALGFHQIQSFTKLSSVYTD 437 (522)
Q Consensus 398 ~~~l~~~ns~lNPiIY~~iy~~~~~~~~~~frk~~~~~~~ 437 (522)
...+..+=..+|+.+.+++|..+...+|+++++.+++..+
T Consensus 431 ~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~l~~~~~~ 470 (488)
T 3eml_A 431 LMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVL 470 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHhhhchhhhhhcCHHHHHHHHHHHhhccc
Confidence 3444455666899999999999999999999999988663
No 24
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=83.20 E-value=14 Score=37.68 Aligned_cols=77 Identities=16% Similarity=0.121 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcccCC------cchhhHHHHHHHHHHHhhhhccCChhhhHHhHHHH
Q psy17390 347 SRARKKVAKMVSVLASSTLASTLSPYTSLVVCLGNISTG------ICSVVVHLAVNYNMMSPWCHSIVPPVEDSTLALAL 420 (522)
Q Consensus 347 ~~~~~k~~k~l~iiv~~f~lc~w~P~~i~~l~~~~~~~~------~~~~~~~~~~~~~~~l~~~ns~lNPiIY~~iy~~~ 420 (522)
.++++|++|++++++++|++| |+|+.++.++....... ........+..+..++.++||++||+||.+...-|
T Consensus 405 ~~~~~k~~k~l~~vv~~F~ic-w~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~f 483 (502)
T 3odu_A 405 GHQKRKALKTTVILILAFFAC-WLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKF 483 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTTTCCC
T ss_pred hHhHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHHHhcccchhhhhhcCHHH
Confidence 356799999999999999999 99999987765432111 11234445566888999999999999886666555
Q ss_pred hHHH
Q psy17390 421 GFHQ 424 (522)
Q Consensus 421 ~~~~ 424 (522)
|..+
T Consensus 484 R~~~ 487 (502)
T 3odu_A 484 KTSA 487 (502)
T ss_dssp CCCH
T ss_pred HHHH
Confidence 5544
No 25
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=81.38 E-value=1.9 Score=43.49 Aligned_cols=37 Identities=14% Similarity=-0.085 Sum_probs=30.9
Q ss_pred HHhhhhccCChhhhHHhHHHHhHHHHHHhhhhcCccc
Q psy17390 400 MSPWCHSIVPPVEDSTLALALGFHQIQSFTKLSSVYT 436 (522)
Q Consensus 400 ~l~~~ns~lNPiIY~~iy~~~~~~~~~~frk~~~~~~ 436 (522)
.+...=..+|+.+.+++|..+...+|+++++.+++..
T Consensus 392 ~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~~~~ 428 (447)
T 4eiy_A 392 YLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHV 428 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhccchhhhHhccHHHHHHHHHHHHHHH
Confidence 3444455689999999999999999999999998765
No 26
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=51.86 E-value=1.9e+02 Score=28.60 Aligned_cols=42 Identities=5% Similarity=0.032 Sum_probs=33.7
Q ss_pred HHHhhhhccCChhhhHHhHHHHhHHHHHHhhhhcCccccccc
Q psy17390 399 MMSPWCHSIVPPVEDSTLALALGFHQIQSFTKLSSVYTDVCE 440 (522)
Q Consensus 399 ~~l~~~ns~lNPiIY~~iy~~~~~~~~~~frk~~~~~~~~c~ 440 (522)
..+..+-..+|+.+.+++|..+...+|++++|.++....+|.
T Consensus 297 ~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~~~~~~~~ 338 (448)
T 2z73_A 297 AQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQ 338 (448)
T ss_dssp HHHHHHHHHHGGGSHHHHHHHHCHHHHHHHHHHCGGGGSTTC
T ss_pred HHHHHHHHHHHHhhcchHHHHhhHHHHHHHHHHHHHHHHhcc
Confidence 334455667899999999999999999999999976554554
No 27
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=51.01 E-value=1.7e+02 Score=27.79 Aligned_cols=48 Identities=10% Similarity=-0.035 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHhhhccCCCCchhHHhHHHHHHHHHHH
Q psy17390 134 LKLTLTQFSELPFGVLGNGTLVLIFARHKNMRSVPNTYILSLALGDLLVI 183 (522)
Q Consensus 134 ~~~~ii~~ii~llgi~gN~lVi~vi~~~r~lr~~~~~li~nLAvaDll~~ 183 (522)
....+...+..+++++|=+..++++.--.+.++..+ ..|+-++.+..+
T Consensus 30 ~~~~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~--~~~~~l~~Laia 77 (364)
T 2ks9_A 30 WQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRT--VTNYFLVNLAFA 77 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCC--HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc--hHHHHHHHHHHH
Confidence 333444666778888998888888887666555443 345555555544
No 28
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=32.82 E-value=3e+02 Score=25.52 Aligned_cols=53 Identities=15% Similarity=0.080 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhccCCCCchhHHhHHHHHHHHHHH
Q psy17390 129 KLRKLLKLTLTQFSELPFGVLGNGTLVLIFARHKNMRSVPNTYILSLALGDLLVI 183 (522)
Q Consensus 129 ~~~~~~~~~ii~~ii~llgi~gN~lVi~vi~~~r~lr~~~~~li~nLAvaDll~~ 183 (522)
.........++..+..+++++|=+..++++.--.+.++..+ ..|.-++.+..+
T Consensus 31 ~~~~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~--~~~~ll~~Lai~ 83 (349)
T 1u19_A 31 YLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRT--PLNYILLNLAVA 83 (349)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCS--HHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcC--chhHHHHHHHHH
Confidence 34566667778788889999999999999988777655543 445555555554
No 29
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=29.99 E-value=4e+02 Score=26.02 Aligned_cols=50 Identities=12% Similarity=-0.142 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHhhhccCCCCchhHHhHHHHHHHHHHHh
Q psy17390 133 LLKLTLTQFSELPFGVLGNGTLVLIFARHKNMRSVPNTYILSLALGDLLVII 184 (522)
Q Consensus 133 ~~~~~ii~~ii~llgi~gN~lVi~vi~~~r~lr~~~~~li~nLAvaDll~~l 184 (522)
.....++.++..+++++|=+..++++.--.+.++... ..|+-++.+.++=
T Consensus 122 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~--~~~~ll~~LAvsD 171 (434)
T 4ea3_A 122 LGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKT--ATNIYIFNLALAD 171 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCC--HHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCc--hhHHHHHHHHHHH
Confidence 4445566677777888898888888887766555543 4455555555443
No 30
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=29.37 E-value=4e+02 Score=25.88 Aligned_cols=52 Identities=8% Similarity=-0.084 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHhhhccCCCCchhHHhHHHHHHHHHHHh
Q psy17390 131 RKLLKLTLTQFSELPFGVLGNGTLVLIFARHKNMRSVPNTYILSLALGDLLVII 184 (522)
Q Consensus 131 ~~~~~~~ii~~ii~llgi~gN~lVi~vi~~~r~lr~~~~~li~nLAvaDll~~l 184 (522)
.......++.++..+++++|=+..++++.--.+.+...+ ..|+-+..+.++=
T Consensus 12 ~~~~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~--~~~~~l~~La~~D 63 (464)
T 4dkl_A 12 PSMVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKT--ATNIYIFNLALAD 63 (464)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCS--HHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCC--HHHHHHHHHHHHH
Confidence 345555667777788899999999999887665554443 3466666666554
No 31
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=28.46 E-value=16 Score=35.77 Aligned_cols=19 Identities=5% Similarity=-0.146 Sum_probs=15.1
Q ss_pred CcccccccccHHHHHHHhc
Q psy17390 2 DHSITSYALNPIWMELLMG 20 (522)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~ 20 (522)
+++-++|.+|||.|.....
T Consensus 249 ~~l~l~~~~~c~~~~~~~~ 267 (350)
T 4ay9_X 249 MEASLTYPSHCCAFANWRR 267 (350)
T ss_dssp CEEECSCHHHHHHHHHSCC
T ss_pred hhCcCCCCccccchhhhhh
Confidence 5667899999999986543
Done!