Query psy17394
Match_columns 163
No_of_seqs 179 out of 314
Neff 5.2
Searched_HMMs 29240
Date Fri Aug 16 21:21:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17394.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17394hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b1z_M Phosphatase and actin r 100.0 7E-40 2.4E-44 247.2 12.1 114 2-115 1-115 (115)
2 2yje_M MKL/myocardin-like prot 100.0 2.1E-29 7.2E-34 195.1 5.0 112 5-116 5-128 (137)
3 3tpm_B MAL; nuclear import, pr 99.9 1.6E-26 5.4E-31 175.4 11.4 105 7-111 3-119 (120)
4 4b1z_M Phosphatase and actin r 99.7 2.6E-18 9.1E-23 129.2 7.4 70 5-74 42-112 (115)
5 2yje_M MKL/myocardin-like prot 99.7 1.4E-18 4.9E-23 134.4 0.5 73 5-77 49-127 (137)
6 3tpm_B MAL; nuclear import, pr 99.7 4.4E-17 1.5E-21 123.4 7.7 69 5-73 45-119 (120)
7 2v52_M MKL/myocardin-like prot 98.7 1.4E-09 4.7E-14 64.8 0.4 28 45-72 3-30 (32)
8 2v52_M MKL/myocardin-like prot 98.6 3.2E-08 1.1E-12 58.9 3.0 29 7-35 3-31 (32)
9 4b1v_M Phosphatase and actin r 96.6 0.0012 4.1E-08 38.6 2.6 27 46-72 4-30 (32)
10 4b1v_M Phosphatase and actin r 94.0 0.039 1.3E-06 32.1 2.6 25 9-33 5-29 (32)
11 3mab_A Uncharacterized protein 33.8 24 0.00083 24.7 2.4 24 127-150 65-88 (93)
12 3odc_A Poly [ADP-ribose] polym 30.3 16 0.00054 26.5 0.9 30 127-156 79-108 (111)
13 3pes_A Uncharacterized protein 29.2 37 0.0013 23.4 2.5 27 121-147 52-81 (85)
14 3rp9_A Mitogen-activated prote 22.3 2.6E+02 0.009 23.0 7.2 79 78-157 371-451 (458)
15 3bqs_A Uncharacterized protein 20.3 65 0.0022 22.3 2.6 23 127-149 65-87 (93)
No 1
>4b1z_M Phosphatase and actin regulator 1; structural protein, nucleotide-binding, transcription regula transcription, muscle protein, ATP-binding; HET: ATP; 3.30A {Mus musculus}
Probab=100.00 E-value=7e-40 Score=247.15 Aligned_cols=114 Identities=60% Similarity=0.868 Sum_probs=107.1
Q ss_pred hhhhhhhhhHHHHHhcCCCChHHHhhhCCCCCCcHHHHHHHHHHHHHHHHHHhcCCCChhHHHHCCCCCCCcHHHHHHHH
Q psy17394 2 LASKIARKDSLAIKLALRPDRQELIDRNILQVQSEKERQETKQVIGARLIRRLSMRPTVEELEDRNILKKQTAAEEKKLK 81 (163)
Q Consensus 2 la~kv~rkd~L~~kL~~RP~~~eL~~rnIL~~~s~~~~~l~r~~~~d~L~rkL~~RP~~eELv~rnIL~~~~~~~~~~~k 81 (163)
||+||+|||+|+.+|++||++++|+++||||+.++++++++|++++|+|+++|++||+++||+++|||++++++++..++
T Consensus 1 la~kv~RKdsL~~kL~~Rp~~~eLv~~~Ilp~~s~~~~~~~r~~~~d~L~rkLs~RP~~eeL~qrnIL~~~~~~~~~~~k 80 (115)
T 4b1z_M 1 LAMKVCRKDSLAIKLSNRPSKRELEEKNILPRQTDEERLELRQQIGTKLTRRLSQRPTAEELEQRNILKPRNEQEEQEEK 80 (115)
T ss_dssp -----CHHHHHHHHHTTCCCHHHHHHTTSSCSSCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHTTTSSCCSCHHHHHHHH
T ss_pred CchHhHhHHHHHHHHhcCCCHHHHHhcCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCHHHHHHcCCCCCCCHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999888899
Q ss_pred HHHHHHhhhhhcCCCChHHHhhhhhc-ccccccee
Q psy17394 82 EEKKKMLLRKLSFRPTVDELKEKKII-RFNDYIEV 115 (163)
Q Consensus 82 ~~~k~~L~~kLs~RPt~~eL~~k~IL-~F~~~Vev 115 (163)
.++++.|++||++|||+.||+++||| +|++||+|
T Consensus 81 ~~l~~~L~~KLs~RP~~~EL~ek~ILi~f~~yvev 115 (115)
T 4b1z_M 81 REIKRRLTRKLSQRPTVEELRERKILIRFSDYVEV 115 (115)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHTTCSCSTTSSTTC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHcCchhhhhccccC
Confidence 99999999999999999999999997 99999997
No 2
>2yje_M MKL/myocardin-like protein 1; motor protein; HET: LAB ATP; 3.10A {Mus musculus} PDB: 2yjf_M*
Probab=99.95 E-value=2.1e-29 Score=195.06 Aligned_cols=112 Identities=26% Similarity=0.334 Sum_probs=41.4
Q ss_pred hhhhhhHHHHHhcCCCChHHHhhhCCCCCCcH------HHHHHHHHHHHHHHHHHhcCCCChhHHHHCCCCCCCcHHHHH
Q psy17394 5 KIARKDSLAIKLALRPDRQELIDRNILQVQSE------KERQETKQVIGARLIRRLSMRPTVEELEDRNILKKQTAAEEK 78 (163)
Q Consensus 5 kv~rkd~L~~kL~~RP~~~eL~~rnIL~~~s~------~~~~l~r~~~~d~L~rkL~~RP~~eELv~rnIL~~~~~~~~~ 78 (163)
.-+|+|+|+.+|++||++++|+++||||+.+. ...++++++++|.|+++|++||+++|||++|||+.++++|+.
T Consensus 5 ~~~rk~sL~~kL~~Rp~~~eL~~~~Ilp~~~~~ps~~~~~~~Ler~~~~d~L~~kL~~RP~~~eLv~rnIL~~~~~apsl 84 (137)
T 2yje_M 5 LSERKNVLQLKLQQRRTREELVSQGIMPPLKSPAAFHEQRRSLERARTEDYLKRKIRSRPERAELVRMHILEETSAEPSL 84 (137)
T ss_dssp --CHHHHHHHHHHSCCCHHHHHHTTSSCCSSSCSTTHHHHHHHHHHHHHHHHHC--------------------------
T ss_pred cHHHHHHHHHHHhcCCCHHHHHHcCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHcCCCCCCCcChHH
Confidence 34799999999999999999999999997543 346789999999999999999999999999999999999874
Q ss_pred HH-HHHH-----HHHhhhhhcCCCChHHHhhhhhccccccceec
Q psy17394 79 KL-KEEK-----KKMLLRKLSFRPTVDELKEKKIIRFNDYIEVT 116 (163)
Q Consensus 79 ~~-k~~~-----k~~L~~kLs~RPt~~eL~~k~IL~F~~~Vev~ 116 (163)
++ +.++ +..|+++|++|||+++|+++|||.|+++|+-.
T Consensus 85 qa~q~eL~r~~~~d~L~~kL~~RP~~~eLve~nIL~~~~~v~~~ 128 (137)
T 2yje_M 85 QAKQLKLKRARLADDLNEKIAQRPGPMELVEKNILPVESSLKEA 128 (137)
T ss_dssp --------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHcCCCCCCccHHHH
Confidence 43 2333 34699999999999999999999999998643
No 3
>3tpm_B MAL; nuclear import, protein transport-transcription complex; 2.10A {Mus musculus} PDB: 3tpq_M* 2v51_E*
Probab=99.94 E-value=1.6e-26 Score=175.38 Aligned_cols=105 Identities=29% Similarity=0.375 Sum_probs=91.8
Q ss_pred hhhhHHHHHhcCCCChHHHhhhCCCCCC------cHHHHHHHHHHHHHHHHHHhcCCCChhHHHHCCCCCCCcHHHHHHH
Q psy17394 7 ARKDSLAIKLALRPDRQELIDRNILQVQ------SEKERQETKQVIGARLIRRLSMRPTVEELEDRNILKKQTAAEEKKL 80 (163)
Q Consensus 7 ~rkd~L~~kL~~RP~~~eL~~rnIL~~~------s~~~~~l~r~~~~d~L~rkL~~RP~~eELv~rnIL~~~~~~~~~~~ 80 (163)
+||++|+.+|++||++++|+++||||+. ....+++.+++++|+|+++|++||+++||+++|||++++++|+.++
T Consensus 3 ~rk~~L~lkLq~Rr~r~qL~~qgIlp~~~~~~~~~~~~~~l~r~~~~d~L~~kl~~RP~~~eL~~rnIL~~~~~~p~lq~ 82 (120)
T 3tpm_B 3 ERKNVLQLKLQQRRTREELVSQGIMPPLKSPAAFHEQRRSLERARTEDYLKRKIRSRPERAELVRMHILEETSAEPSLQA 82 (120)
T ss_pred hhHHHHHHHHhcCCCHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhcCCcccccchhHHH
Confidence 7899999999999999999999999993 2335788999999999999999999999999999999999987433
Q ss_pred -HHH-----HHHHhhhhhcCCCChHHHhhhhhccccc
Q psy17394 81 -KEE-----KKKMLLRKLSFRPTVDELKEKKIIRFND 111 (163)
Q Consensus 81 -k~~-----~k~~L~~kLs~RPt~~eL~~k~IL~F~~ 111 (163)
+++ ++..|++||++|||+++|+++|||..+.
T Consensus 83 ~~~~L~r~~~~d~L~~kl~~RP~~~eLv~~nIL~~d~ 119 (120)
T 3tpm_B 83 KQLKLKRARLADDLNEKIAQRPGPMELVEKNILPVES 119 (120)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHcCCCCCCC
Confidence 222 3446999999999999999999997654
No 4
>4b1z_M Phosphatase and actin regulator 1; structural protein, nucleotide-binding, transcription regula transcription, muscle protein, ATP-binding; HET: ATP; 3.30A {Mus musculus}
Probab=99.74 E-value=2.6e-18 Score=129.23 Aligned_cols=70 Identities=44% Similarity=0.610 Sum_probs=65.7
Q ss_pred hhhhhhHHHHHhcCCCChHHHhhhCCCCCCcHHHHHHHHHHHHHHHHHHhcCCCChhHHHHCCCC-CCCcH
Q psy17394 5 KIARKDSLAIKLALRPDRQELIDRNILQVQSEKERQETKQVIGARLIRRLSMRPTVEELEDRNIL-KKQTA 74 (163)
Q Consensus 5 kv~rkd~L~~kL~~RP~~~eL~~rnIL~~~s~~~~~l~r~~~~d~L~rkL~~RP~~eELv~rnIL-~~~~~ 74 (163)
|-...|+|.++|++||+++||+++|||++.+++++.++++++++.|++||++||+++||+++||| +|+..
T Consensus 42 r~~~~d~L~rkLs~RP~~eeL~qrnIL~~~~~~~~~~~k~~l~~~L~~KLs~RP~~~EL~ek~ILi~f~~y 112 (115)
T 4b1z_M 42 RQQIGTKLTRRLSQRPTAEELEQRNILKPRNEQEEQEEKREIKRRLTRKLSQRPTVEELRERKILIRFSDY 112 (115)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHTTTSSCCSCHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHTTCSCSTTSS
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHcCchhhhhcc
Confidence 44668999999999999999999999999999999999999999999999999999999999998 88654
No 5
>2yje_M MKL/myocardin-like protein 1; motor protein; HET: LAB ATP; 3.10A {Mus musculus} PDB: 2yjf_M*
Probab=99.70 E-value=1.4e-18 Score=134.37 Aligned_cols=73 Identities=27% Similarity=0.434 Sum_probs=8.3
Q ss_pred hhhhhhHHHHHhcCCCChHHHhhhCCCCCCcHH------HHHHHHHHHHHHHHHHhcCCCChhHHHHCCCCCCCcHHHH
Q psy17394 5 KIARKDSLAIKLALRPDRQELIDRNILQVQSEK------ERQETKQVIGARLIRRLSMRPTVEELEDRNILKKQTAAEE 77 (163)
Q Consensus 5 kv~rkd~L~~kL~~RP~~~eL~~rnIL~~~s~~------~~~l~r~~~~d~L~rkL~~RP~~eELv~rnIL~~~~~~~~ 77 (163)
|-+++|+|.++|++||+++|||++|||+.++.+ +++++|++++|.|+++|++||+++|||++|||++++.+..
T Consensus 49 r~~~~d~L~~kL~~RP~~~eLv~rnIL~~~~~apslqa~q~eL~r~~~~d~L~~kL~~RP~~~eLve~nIL~~~~~v~~ 127 (137)
T 2yje_M 49 RARTEDYLKRKIRSRPERAELVRMHILEETSAEPSLQAKQLKLKRARLADDLNEKIAQRPGPMELVEKNILPVESSLKE 127 (137)
T ss_dssp HHHHHHHHHC---------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHcCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHcCCCCCCccHHH
Confidence 447899999999999999999999999998765 3778999999999999999999999999999998776543
No 6
>3tpm_B MAL; nuclear import, protein transport-transcription complex; 2.10A {Mus musculus} PDB: 3tpq_M* 2v51_E*
Probab=99.69 E-value=4.4e-17 Score=123.44 Aligned_cols=69 Identities=28% Similarity=0.426 Sum_probs=63.6
Q ss_pred hhhhhhHHHHHhcCCCChHHHhhhCCCCCCcHHH------HHHHHHHHHHHHHHHhcCCCChhHHHHCCCCCCCc
Q psy17394 5 KIARKDSLAIKLALRPDRQELIDRNILQVQSEKE------RQETKQVIGARLIRRLSMRPTVEELEDRNILKKQT 73 (163)
Q Consensus 5 kv~rkd~L~~kL~~RP~~~eL~~rnIL~~~s~~~------~~l~r~~~~d~L~rkL~~RP~~eELv~rnIL~~~~ 73 (163)
+-..+|+|.++|++||+++||+++|||+.+++++ +++++++++|.|+++|++||+++|||++|||+.++
T Consensus 45 r~~~~d~L~~kl~~RP~~~eL~~rnIL~~~~~~p~lq~~~~~L~r~~~~d~L~~kl~~RP~~~eLv~~nIL~~d~ 119 (120)
T 3tpm_B 45 RARTEDYLKRKIRSRPERAELVRMHILEETSAEPSLQAKQLKLKRARLADDLNEKIAQRPGPMELVEKNILPVES 119 (120)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHhcCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHcCCCCCCC
Confidence 3467899999999999999999999999988664 77899999999999999999999999999999875
No 7
>2v52_M MKL/myocardin-like protein 1; structural protein/contractIle protein, structural protein, contractIle protein, nucleotide-binding; HET: LAB ATP; 1.45A {Mus musculus}
Probab=98.73 E-value=1.4e-09 Score=64.83 Aligned_cols=28 Identities=29% Similarity=0.364 Sum_probs=17.4
Q ss_pred HHHHHHHHHhcCCCChhHHHHCCCCCCC
Q psy17394 45 VIGARLIRRLSMRPTVEELEDRNILKKQ 72 (163)
Q Consensus 45 ~~~d~L~rkL~~RP~~eELv~rnIL~~~ 72 (163)
+.+|.|+++|.+||+++|||++|||+++
T Consensus 3 k~~D~Lk~kl~~RPdR~eLV~~~IL~~s 30 (32)
T 2v52_M 3 RTEDYLKRKIRSRPERAELVRMHILEET 30 (32)
T ss_dssp SCSHHHHHHHHTCCCHHHHHHTTSSCCC
T ss_pred hHHHHHHHHHHcCCCHHHHHHhcCCCCC
Confidence 3456666666666666666666666654
No 8
>2v52_M MKL/myocardin-like protein 1; structural protein/contractIle protein, structural protein, contractIle protein, nucleotide-binding; HET: LAB ATP; 1.45A {Mus musculus}
Probab=98.57 E-value=3.2e-08 Score=58.93 Aligned_cols=29 Identities=38% Similarity=0.542 Sum_probs=26.2
Q ss_pred hhhhHHHHHhcCCCChHHHhhhCCCCCCc
Q psy17394 7 ARKDSLAIKLALRPDRQELIDRNILQVQS 35 (163)
Q Consensus 7 ~rkd~L~~kL~~RP~~~eL~~rnIL~~~s 35 (163)
+.+|+|+++|.+||+++|||++|||+.++
T Consensus 3 k~~D~Lk~kl~~RPdR~eLV~~~IL~~s~ 31 (32)
T 2v52_M 3 RTEDYLKRKIRSRPERAELVRMHILEETS 31 (32)
T ss_dssp SCSHHHHHHHHTCCCHHHHHHTTSSCCC-
T ss_pred hHHHHHHHHHHcCCCHHHHHHhcCCCCCC
Confidence 45799999999999999999999999875
No 9
>4b1v_M Phosphatase and actin regulator 1; structural protein, nucleotide-binding, transcription regula transcription, muscle protein, ATP-binding; HET: ATP LAB; 1.75A {Mus musculus}
Probab=96.65 E-value=0.0012 Score=38.58 Aligned_cols=27 Identities=44% Similarity=0.585 Sum_probs=22.5
Q ss_pred HHHHHHHHhcCCCChhHHHHCCCCCCC
Q psy17394 46 IGARLIRRLSMRPTVEELEDRNILKKQ 72 (163)
Q Consensus 46 ~~d~L~rkL~~RP~~eELv~rnIL~~~ 72 (163)
+...|+||+|.|-+++||+.||+|+.-
T Consensus 4 ts~vlerkis~rqsreelikrgvlke~ 30 (32)
T 4b1v_M 4 TSAALERKISMRQSREELIKRGVLKEI 30 (32)
T ss_dssp -CHHHHHHHHTCCCHHHHHHTTSCCCC
T ss_pred hHHHHHHHHHhcccHHHHHHhhhhhhc
Confidence 456789999999999999999999864
No 10
>4b1v_M Phosphatase and actin regulator 1; structural protein, nucleotide-binding, transcription regula transcription, muscle protein, ATP-binding; HET: ATP LAB; 1.75A {Mus musculus}
Probab=93.97 E-value=0.039 Score=32.13 Aligned_cols=25 Identities=36% Similarity=0.636 Sum_probs=22.2
Q ss_pred hhHHHHHhcCCCChHHHhhhCCCCC
Q psy17394 9 KDSLAIKLALRPDRQELIDRNILQV 33 (163)
Q Consensus 9 kd~L~~kL~~RP~~~eL~~rnIL~~ 33 (163)
...|++|++.|.+++||+.+|.|..
T Consensus 5 s~vlerkis~rqsreelikrgvlke 29 (32)
T 4b1v_M 5 SAALERKISMRQSREELIKRGVLKE 29 (32)
T ss_dssp CHHHHHHHHTCCCHHHHHHTTSCCC
T ss_pred HHHHHHHHHhcccHHHHHHhhhhhh
Confidence 3569999999999999999999864
No 11
>3mab_A Uncharacterized protein; NYSGXRC, PSI-2, structural genomics; 1.42A {Listeria monocytogenes} PDB: 3bqt_A
Probab=33.80 E-value=24 Score=24.69 Aligned_cols=24 Identities=17% Similarity=0.322 Sum_probs=21.9
Q ss_pred CCCCcCCHHhHHHHHHHHHHhhhh
Q psy17394 127 KPWTRLTPKDKAAIRKELNEFKSS 150 (163)
Q Consensus 127 ~~~~rLtp~~~~~Ir~eLn~~k~~ 150 (163)
.+|+-|+++.|+.+++=.+.||..
T Consensus 65 ~~w~~l~~~~K~~L~~~~~~lk~~ 88 (93)
T 3mab_A 65 IRWHGLDEAKKIELKKFHQSLEGH 88 (93)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHCC-
T ss_pred CcHHHCCHHHHHHHHHHHHHhhcc
Confidence 689999999999999999999984
No 12
>3odc_A Poly [ADP-ribose] polymerase 1; protein-DNA complex, PARP zinc finger, DNA binding protein-D complex; 2.80A {Homo sapiens} PDB: 3ode_A 2l31_A
Probab=30.32 E-value=16 Score=26.46 Aligned_cols=30 Identities=37% Similarity=0.555 Sum_probs=18.8
Q ss_pred CCCCcCCHHhHHHHHHHHHHhhhhcccccc
Q psy17394 127 KPWTRLTPKDKAAIRKELNEFKSSEMEVHQ 156 (163)
Q Consensus 127 ~~~~rLtp~~~~~Ir~eLn~~k~~em~vh~ 156 (163)
.-|..|.+.|.+.|++-|..+|+..++-|.
T Consensus 79 ~Gf~~L~~eDQe~Ikk~i~~~~~~~~~~~~ 108 (111)
T 3odc_A 79 KGFSLLATEDKEALKKQLPGVKSEGLEHHH 108 (111)
T ss_dssp ETGGGSCHHHHHHHHHHSCC----------
T ss_pred CChHHCCHHHHHHHHHHHHhhccccchhcc
Confidence 469999999999999999999998777653
No 13
>3pes_A Uncharacterized protein GP49; PSI2, structural genomics, protein structure initiative, MID center for structural genomics, MCSG; 1.30A {Pseudomonas phage yua}
Probab=29.16 E-value=37 Score=23.43 Aligned_cols=27 Identities=30% Similarity=0.620 Sum_probs=22.5
Q ss_pred CCCCCC-CCC--CcCCHHhHHHHHHHHHHh
Q psy17394 121 YDRRAD-KPW--TRLTPKDKAAIRKELNEF 147 (163)
Q Consensus 121 ydrr~d-~~~--~rLtp~~~~~Ir~eLn~~ 147 (163)
-||||- +|| -.||..++++|-.|.-++
T Consensus 52 ~DRRGR~A~WLE~K~T~~~r~RI~~~i~~~ 81 (85)
T 3pes_A 52 RDRRGRPAPWLERKLTEAERERIDQAVFDR 81 (85)
T ss_dssp ECTTSCBCHHHHTTCCHHHHHHHHHHHHHH
T ss_pred eeccCCccHHHHhHhhHHHHHHHHHHHHHH
Confidence 479998 788 489999999999887654
No 14
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=22.26 E-value=2.6e+02 Score=22.96 Aligned_cols=79 Identities=19% Similarity=0.237 Sum_probs=47.4
Q ss_pred HHHHHHHHHHhhhhhcCCCChHHHhhhhhccccccceecc-cccCCCCCCCCCCcCCH-HhHHHHHHHHHHhhhhccccc
Q psy17394 78 KKLKEEKKKMLLRKLSFRPTVDELKEKKIIRFNDYIEVTQ-AHDYDRRADKPWTRLTP-KDKAAIRKELNEFKSSEMEVH 155 (163)
Q Consensus 78 ~~~k~~~k~~L~~kLs~RPt~~eL~~k~IL~F~~~Vev~~-~~~ydrr~d~~~~rLtp-~~~~~Ir~eLn~~k~~em~vh 155 (163)
....++++++|..-=..|||.+++.+--.+.--....+.. +..--+-+-..|..++. ..+..|..|+..|+- ++.+.
T Consensus 371 ~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~-~~~~~ 449 (458)
T 3rp9_A 371 ADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAEVETNATEKVRLPFNDWMNMDEPQLRYAFVKEIQRYHP-EIQLP 449 (458)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCCGGGCCCCSSCCCCSSCTTSCCCHHHHHHHHHHHHTTTCT-TCCCC
T ss_pred HHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCCCccCCCCCCCCCCCccccccCCHHHHHHHHHHHHHHhCc-cccCC
Confidence 4567889999998889999999998766542111111111 00000001125777774 556778899999886 56555
Q ss_pred cc
Q psy17394 156 QE 157 (163)
Q Consensus 156 ~~ 157 (163)
..
T Consensus 450 ~~ 451 (458)
T 3rp9_A 450 RR 451 (458)
T ss_dssp C-
T ss_pred CC
Confidence 43
No 15
>3bqs_A Uncharacterized protein; 10114F, NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.42A {Listeria monocytogenes str} PDB: 3bqt_A 3mab_A
Probab=20.34 E-value=65 Score=22.34 Aligned_cols=23 Identities=17% Similarity=0.339 Sum_probs=20.3
Q ss_pred CCCCcCCHHhHHHHHHHHHHhhh
Q psy17394 127 KPWTRLTPKDKAAIRKELNEFKS 149 (163)
Q Consensus 127 ~~~~rLtp~~~~~Ir~eLn~~k~ 149 (163)
.+|+-||++.|+.++..+|.+.-
T Consensus 65 ~~w~~l~~~~K~~L~~~~~~~~~ 87 (93)
T 3bqs_A 65 IRWHGLDEAKKIELKKFHQSLEG 87 (93)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHC-
T ss_pred CCHHHCCHHHHHHHHHHHHHhhc
Confidence 79999999999999999888764
Done!