BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17404
(305 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1QMU|A Chain A, Duck Carboxypeptidase D Domain Ii
pdb|1H8L|A Chain A, Duck Carboxypeptidase D Domain Ii In Complex With Gemsa
Length = 380
Score = 338 bits (867), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 169/343 (49%), Positives = 223/343 (65%), Gaps = 40/343 (11%)
Query: 1 MQAELEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEV 60
M+ L YP++TRLYSVG+SVE REL+V+E+S +PG+H+ G PEFKY+ NMHGNEV
Sbjct: 16 MEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGIHEAGEPEFKYIGNMHGNEV 75
Query: 61 VGREXXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGYERARE------------ 108
VGRE +YLC+N+ D VT ++Q+TRIH+MPSMNPDGYE+++E
Sbjct: 76 VGRELLLNLIEYLCKNFGTDPEVTDLVQSTRIHIMPSMNPDGYEKSQEGDRGGTVGRNNS 135
Query: 109 -------------------------AVEKWLQDIPFVLSANLHGGSLVANYPYDDNQAMK 143
AV WL+ PFVLSANLHGGSLV NYP+DD++
Sbjct: 136 NNYDLNRNFPDQFFQVTDPPQPETLAVMSWLKTYPFVLSANLHGGSLVVNYPFDDDE-QG 194
Query: 144 PQVDSPTPDDSIFKLLASSYANAHKKMYKDPGCPE-YPEENFPGGIVNGAQWYVVSGGMQ 202
+ S +PDD++F+ LA SY+ +KKMY+ C + YP E FP GI NGAQWY V GGMQ
Sbjct: 195 IAIYSKSPDDAVFQQLALSYSKENKKMYQGSPCKDLYPTEYFPHGITNGAQWYNVPGGMQ 254
Query: 203 DYNYIHANTLEITLELGCYKFPPAKDLPSYWEDNLPALLSYIEQVHRGVAGFV-KGREGE 261
D+NY++ N E+T+ELGC K+P A++LP YWE N +LL +I+QVHRG+ GFV +G
Sbjct: 255 DWNYLNTNCFEVTIELGCVKYPKAEELPKYWEQNRRSLLQFIKQVHRGIWGFVLDATDGR 314
Query: 262 GVAEASIAVEGLGHVVYSAQDGDYWRLLAPGNYTLHVSAPGED 304
G+ A+I+V + H V + +DGDYWRLL G Y + SA G D
Sbjct: 315 GILNATISVADINHPVTTYKDGDYWRLLVQGTYKVTASARGYD 357
>pdb|2NSM|A Chain A, Crystal Structure Of The Human Carboxypeptidase N
(kininase I) Catalytic Domain
Length = 439
Score = 268 bits (684), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 145/365 (39%), Positives = 202/365 (55%), Gaps = 69/365 (18%)
Query: 5 LEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEVVGRE 64
L + P +TR+YS+G+SVE R L+VLE S HPG+H+P PE KYV NMHGNE +GRE
Sbjct: 16 LYKVQNECPGITRVYSIGRSVEGRHLYVLEFSDHPGIHEPLEPEVKYVGNMHGNEALGRE 75
Query: 65 XXXXXAQYLCQNYK-IDDRVTRMLQTTRIHLM---------------------------- 95
+++LC+ ++ + R+ +++Q TRIH++
Sbjct: 76 LMLQLSEFLCEEFRNRNQRIVQLIQDTRIHILPSMNPDGYEVAAAQGPNKPGYLVGRNNA 135
Query: 96 ---------PSMN------------------PDGYERARE----AVEKWLQDIPFVLSAN 124
P +N PD ++ E AV +W+ FVLSAN
Sbjct: 136 NGVDLNRNFPDLNTYIYYNEKYGGPNHHLPLPDNWKSQVEPETRAVIRWMHSFNFVLSAN 195
Query: 125 LHGGSLVANYPYDDN-----QAMKPQVDSPTPDDSIFKLLASSYANAHKKMYKDPGCPEY 179
LHGG++VANYPYD + + ++ +PTPDD +F+ LA Y+ AH M++ C +Y
Sbjct: 196 LHGGAVVANYPYDKSFEHRVRGVRRTASTPTPDDKLFQKLAKVYSYAHGWMFQGWNCGDY 255
Query: 180 PEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCYKFPPAKDLPSYWEDNLPA 239
FP GI NGA WY +S GMQD+NY+H N EITLEL C KFPP ++L W N A
Sbjct: 256 ----FPDGITNGASWYSLSKGMQDFNYLHTNCFEITLELSCDKFPPEEELQREWLGNKEA 311
Query: 240 LLSYIEQVHRGVAGFVKGREGEGVAEASIAVEGLGHVVYSAQDGDYWRLLAPGNYTLHVS 299
L+ ++EQVH+G+ G V + +A A I+V G+ H V S GDY+RLL PG YT+ +
Sbjct: 312 LIQFLEQVHQGIKGMVLDQNYNNLANAVISVSGINHDVTSGDHGDYFRLLLPGIYTVSAT 371
Query: 300 APGED 304
APG D
Sbjct: 372 APGYD 376
>pdb|1UWY|A Chain A, Crystal Structure Of Human Carboxypeptidase M
Length = 426
Score = 265 bits (676), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 142/345 (41%), Positives = 199/345 (57%), Gaps = 43/345 (12%)
Query: 1 MQAELEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEV 60
M+A L+ + +NY ++T L+S+G+SV+ R LWVL + P H+ G+PEFKYVANMHG+E
Sbjct: 11 MEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRFPKEHRIGIPEFKYVANMHGDET 70
Query: 61 VGREXXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGYERARE------------ 108
VGRE YL + D +T ++ +TRIH+MPSMNPDG+E ++
Sbjct: 71 VGRELLLHLIDYLVTSDGKDPEITNLINSTRIHIMPSMNPDGFEAVKKPDCYYSIGRENY 130
Query: 109 -------------------------AVEKWLQDIPFVLSANLHGGSLVANYPYDDNQAMK 143
AV KWL+ FVLSANLHGG+LVA+YP+D+
Sbjct: 131 NQYDLNRNFPDAFEYNNVSRQPETVAVMKWLKTETFVLSANLHGGALVASYPFDNGVQAT 190
Query: 144 PQV--DSPTPDDSIFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGM 201
+ S TPDD +F+ LA +YA+ + M K C + NFP G+ NG WY + GGM
Sbjct: 191 GALYSRSLTPDDDVFQYLAHTYASRNPNMKKGDECKN--KMNFPNGVTNGYSWYPLQGGM 248
Query: 202 QDYNYIHANTLEITLELGCYKFPPAKDLPSYWEDNLPALLSYIEQVHRGVAGFVKGREGE 261
QDYNYI A EITLEL C K+P + LPS+W +N +L+ YI+QVH GV G V + G
Sbjct: 249 QDYNYIWAQCFEITLELSCCKYPREEKLPSFWNNNKASLIEYIKQVHLGVKGQVFDQNGN 308
Query: 262 GVAEASIAVEGLGHVV--YSAQDGDYWRLLAPGNYTLHVSAPGED 304
+ + V+ H+ + + G+Y+ LL PG+Y ++V+ PG D
Sbjct: 309 PLPNVIVEVQDRKHICPYRTNKYGEYYLLLLPGSYIINVTVPGHD 353
>pdb|3MN8|A Chain A, Structure Of Drosophila Melanogaster Carboxypeptidase D
Isoform 1b Short
pdb|3MN8|B Chain B, Structure Of Drosophila Melanogaster Carboxypeptidase D
Isoform 1b Short
pdb|3MN8|C Chain C, Structure Of Drosophila Melanogaster Carboxypeptidase D
Isoform 1b Short
pdb|3MN8|D Chain D, Structure Of Drosophila Melanogaster Carboxypeptidase D
Isoform 1b Short
Length = 435
Score = 234 bits (598), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 128/343 (37%), Positives = 188/343 (54%), Gaps = 52/343 (15%)
Query: 8 ITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEVVGREXXX 67
+ K YPN +++ +G+S+E R L L++S + P KY+ANMHG+E VGR+
Sbjct: 53 LEKAYPNQAKVHFLGRSLEGRNLLALQISRNTRSRNLLTPPVKYIANMHGDETVGRQLLV 112
Query: 68 XXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGYERARE------------------- 108
AQYL N++ + +++ +T I+L+P+MNPDGY ++E
Sbjct: 113 YMAQYLLGNHERISDLGQLVNSTDIYLVPTMNPDGYALSQEGNCESLPNYVGRGNAANID 172
Query: 109 ---------------------------AVEKWLQDIPFVLSANLHGGSLVANYPYDDNQA 141
A+ W+ PFVLSAN HGG++VA+YPYD++ A
Sbjct: 173 LNRDFPDRLEQSHVHQLRAQSRQPETAALVNWIVSKPFVLSANFHGGAVVASYPYDNSLA 232
Query: 142 MKPQVD-SPTPDDSIFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGG 200
+ S TPDD +FK LA +Y++ H M K C ++F GGI NGA WY +SGG
Sbjct: 233 HNECCEESLTPDDRVFKQLAHTYSDNHPIMRKGNNC----NDSFSGGITNGAHWYELSGG 288
Query: 201 MQDYNYIHANTLEITLELGCYKFPPAKDLPSYWEDNLPALLSYIEQVHRGVAGFVKGREG 260
MQD+NY +N E+T+EL C K+P A LP W+ N +LL + Q H G+ G V G
Sbjct: 289 MQDFNYAFSNCFELTIELSCCKYPAASTLPQEWQRNKASLLQLLRQAHIGIKGLVTDASG 348
Query: 261 EGVAEASIAVEGLGHV-VYSAQDGDYWRLLAPGNYTLHVSAPG 302
+A+A++ V GL + +++ G+YWRLL PG Y++H SA G
Sbjct: 349 FPIADANVYVAGLEEKPMRTSKRGEYWRLLTPGLYSVHASAFG 391
>pdb|3V38|A Chain A, Carboxypeptidase T Mutant L254n
Length = 326
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 1 MQAELEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEV 60
M ++ + NYPN+ + +S+G+S E RELW +++S + G + PE Y A H E
Sbjct: 15 MVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDE-NEPEVLYTALHHAREH 73
Query: 61 VGREXXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDG--YERAREAVEKWLQDIP 118
+ E QNY +D R+T ++ I+++ ++NPDG Y+ + + + W ++
Sbjct: 74 LTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDGGEYDISSGSYKSWRKNRQ 133
Query: 119 FVLSANLHGGSLVANYPY 136
++ G L NY Y
Sbjct: 134 PNSGSSYVGTDLNRNYGY 151
>pdb|3PRT|A Chain A, Mutant Of The Carboxypeptidase T
Length = 323
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 1 MQAELEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEV 60
M ++ + NYPN+ + +S+G+S E RELW +++S + G + PE Y A H E
Sbjct: 15 MVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDE-NEPEVLYTALHHAREH 73
Query: 61 VGREXXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDG--YERAREAVEKWLQDIP 118
+ E QNY +D R+T ++ I+++ ++NPDG Y+ + + + W ++
Sbjct: 74 LTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDGGEYDISSGSYKSWRKNRQ 133
Query: 119 FVLSANLHGGSLVANYPY 136
++ G L NY Y
Sbjct: 134 PNSGSSYVGTDLNRNYGY 151
>pdb|1OBR|A Chain A, Carboxypeptidase T
pdb|3V7Z|A Chain A, Carboxypeptidase T With Gemsa
pdb|4DUK|A Chain A, Carboxypeptidase T With L-benzylsuccinic Acid
Length = 326
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 1 MQAELEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEV 60
M ++ + NYPN+ + +S+G+S E RELW +++S + G + PE Y A H E
Sbjct: 15 MVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDE-NEPEVLYTALHHAREH 73
Query: 61 VGREXXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDG--YERAREAVEKWLQDIP 118
+ E QNY +D R+T ++ I+++ ++NPDG Y+ + + + W ++
Sbjct: 74 LTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDGGEYDISSGSYKSWRKNRQ 133
Query: 119 FVLSANLHGGSLVANYPY 136
++ G L NY Y
Sbjct: 134 PNSGSSYVGTDLNRNYGY 151
>pdb|3QNV|A Chain A, Carboxypeptidase T
pdb|4DJL|A Chain A, Carboxypeptidase T With N-sulfamoyl-l-phenylalanine
Length = 323
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 1 MQAELEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEV 60
M ++ + NYPN+ + +S+G+S E RELW +++S + G + PE Y A H E
Sbjct: 15 MVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDE-NEPEVLYTALHHAREH 73
Query: 61 VGREXXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDG--YERAREAVEKWLQDIP 118
+ E QNY +D R+T ++ I+++ ++NPDG Y+ + + + W ++
Sbjct: 74 LTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDGGEYDISSGSYKSWRKNRQ 133
Query: 119 FVLSANLHGGSLVANYPY 136
++ G L NY Y
Sbjct: 134 PNSGSSYVGTDLNRNYGY 151
>pdb|2BO9|A Chain A, Human Carboxypeptidase A4 In Complex With Human Latexin.
pdb|2BO9|C Chain C, Human Carboxypeptidase A4 In Complex With Human Latexin
Length = 308
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 4 ELEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEVVGR 63
E+++I ++P+L R +G S E R ++VL+ ST GV +P V A +H E + +
Sbjct: 19 EMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRPAV---WLNAGIHSREWISQ 75
Query: 64 EXXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGY 103
A+ + +Y+ D +T +L+ I L+P NPDGY
Sbjct: 76 ATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGY 115
>pdb|2PCU|A Chain A, Human Carboxypeptidase A4 In Complex With A Cleaved
Hexapeptide
Length = 305
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 4 ELEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEVVGR 63
E+++I ++P+L R +G S E R ++VL+ ST GV +P V A +H E + +
Sbjct: 17 EMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRPAV---WLNAGIHSREWISQ 73
Query: 64 EXXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGY 103
A+ + +Y+ D +T +L+ I L+P NPDGY
Sbjct: 74 ATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGY 113
>pdb|4A94|A Chain A, Structure Of The Carboxypeptidase Inhibitor From Nerita
Versicolor In Complex With Human Cpa4
pdb|4A94|B Chain B, Structure Of The Carboxypeptidase Inhibitor From Nerita
Versicolor In Complex With Human Cpa4
Length = 310
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 4 ELEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEVVGR 63
E+++I ++P+L R +G S E R ++VL+ ST GV +P V A +H E + +
Sbjct: 21 EMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRPAV---WLNAGIHSREWISQ 77
Query: 64 EXXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGY 103
A+ + +Y+ D +T +L+ I L+P NPDGY
Sbjct: 78 ATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGY 117
>pdb|2BOA|A Chain A, Human Procarboxypeptidase A4.
pdb|2BOA|B Chain B, Human Procarboxypeptidase A4
Length = 404
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 4 ELEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEVVGR 63
E+++I ++P+L R +G S E R ++VL+ ST GV +P V A +H E + +
Sbjct: 115 EMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRPAV---WLNAGIHSREWISQ 171
Query: 64 EXXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGY 103
A+ + +Y+ D +T +L+ I L+P NPDGY
Sbjct: 172 ATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGY 211
>pdb|1DTD|A Chain A, Crystal Structure Of The Complex Between The Leech
Carboxypeptidase Inhibitor And The Human
Carboxypeptidase A2 (Lci-Cpa2)
Length = 303
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 5/128 (3%)
Query: 1 MQAELEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEV 60
+ E++++ +P L ++G S E R + VL+ ST G KP + A +H E
Sbjct: 12 ISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFST--GGDKPAI---WLDAGIHAREW 66
Query: 61 VGREXXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGYERAREAVEKWLQDIPFV 120
V + A + +Y D +T +L I L+P NPDGY ++ W + V
Sbjct: 67 VTQATALWTANKIVSDYGKDPSITSILDALDIFLLPVTNPDGYVFSQTKNRMWRKTRSKV 126
Query: 121 LSANLHGG 128
+ +L G
Sbjct: 127 SAGSLCVG 134
>pdb|1AYE|A Chain A, Human Procarboxypeptidase A2
Length = 401
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 1 MQAELEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEV 60
+ E++++ +P L ++G S E R + VL+ ST G KP + A +H E
Sbjct: 111 ISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFST--GGDKPAI---WLDAGIHAREW 165
Query: 61 VGREXXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGYERAREAVEKW 113
V + A + +Y D +T +L I L+P NPDGY ++ W
Sbjct: 166 VTQATALWTANKIVSDYGKDPSITSILDALDIFLLPVTNPDGYVFSQTKNRMW 218
>pdb|3LMS|A Chain A, Structure Of Human Activated Thrombin-Activatable
Fibrinolys Inhibitor, Tafia, In Complex With
Tick-Derived Funnelin Inh Tci
Length = 309
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
Query: 5 LEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEVVGRE 64
+E IT+ +P++ +G S EK L+VL++S G + +H E +
Sbjct: 19 IEFITERHPDMLTKIHIGSSFEKYPLYVLKVS---GKEQAAKNAIWIDCGIHAREWISPA 75
Query: 65 XXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGYERAREAVEKWLQDIPFVLSAN 124
++ Q Y I + T +L+ ++MP +N DGY+ + + W ++ F + +
Sbjct: 76 FCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPVVNVDGYDYSWKKNRMWRKNRSFYANNH 135
Query: 125 LHGGSLVANY 134
G L N+
Sbjct: 136 CIGTDLNRNF 145
>pdb|3D68|A Chain A, Crystal Structure Of A T325i/t329i/h333y/h335q Mutant Of
Thrombin- Activatable Fibrinolysis Inhibitor (tafi-iiyq)
pdb|3D68|B Chain B, Crystal Structure Of A T325i/t329i/h333y/h335q Mutant Of
Thrombin- Activatable Fibrinolysis Inhibitor (tafi-iiyq)
pdb|3D68|C Chain C, Crystal Structure Of A T325i/t329i/h333y/h335q Mutant Of
Thrombin- Activatable Fibrinolysis Inhibitor (tafi-iiyq)
Length = 424
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
Query: 5 LEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEVVGRE 64
+E IT+ +P++ +G S EK L+VL++S G + +H E +
Sbjct: 134 IEFITERHPDMLTKIHIGSSFEKYPLYVLKVS---GKEQTAKNAIWIDCGIHAREWISPA 190
Query: 65 XXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGYERAREAVEKWLQDIPFVLSAN 124
++ Q Y I + T +L+ ++MP +N DGY+ + + W ++ F + +
Sbjct: 191 FCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPVVNVDGYDYSWKKNRMWRKNRSFYANNH 250
Query: 125 LHGGSLVANY 134
G L N+
Sbjct: 251 CIGTDLNRNF 260
>pdb|3D66|A Chain A, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3D66|B Chain B, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3D66|C Chain C, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3D67|A Chain A, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi) In Complex With
2-Guanidino-Ethyl-Mercaptosuccinic Acid (Gemsa)
pdb|3D67|B Chain B, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi) In Complex With
2-Guanidino-Ethyl-Mercaptosuccinic Acid (Gemsa)
pdb|3D67|C Chain C, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi) In Complex With
2-Guanidino-Ethyl-Mercaptosuccinic Acid (Gemsa)
Length = 424
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
Query: 5 LEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEVVGRE 64
+E IT+ +P++ +G S EK L+VL++S G + +H E +
Sbjct: 134 IEFITERHPDMLTKIHIGSSFEKYPLYVLKVS---GKEQTAKNAIWIDCGIHAREWISPA 190
Query: 65 XXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGYERAREAVEKWLQDIPFVLSAN 124
++ Q Y I + T +L+ ++MP +N DGY+ + + W ++ F + +
Sbjct: 191 FCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPVVNVDGYDYSWKKNRMWRKNRSFYANNH 250
Query: 125 LHGGSLVANY 134
G L N+
Sbjct: 251 CIGTDLNRNF 260
>pdb|3FJU|A Chain A, Ascaris Suum Carboxypeptidase Inhibitor In Complex With
Human Carboxypeptidase A1
Length = 307
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 4/109 (3%)
Query: 5 LEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEVVGRE 64
L+ + P+L +G + E R ++VL+ ST G +P + +H E V +
Sbjct: 21 LDLLVAENPHLVSKIQIGNTYEGRPIYVLKFST-GGSKRPAI---WIDTGIHSREWVTQA 76
Query: 65 XXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGYERAREAVEKW 113
A+ + Q+Y D T +L T I L NPDG+ W
Sbjct: 77 SGVWFAKKITQDYGQDAAFTAILDTLDIFLEIVTNPDGFAFTHSTNRMW 125
>pdb|2V77|A Chain A, Crystal Structure Of Human Carboxypeptidase A1
pdb|2V77|B Chain B, Crystal Structure Of Human Carboxypeptidase A1
Length = 309
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 4/109 (3%)
Query: 5 LEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEVVGRE 64
L+ + P+L +G + E R ++VL+ ST G +P + +H E V +
Sbjct: 22 LDLLVAENPHLVSKIQIGNTYEGRPIYVLKFST-GGSKRPAI---WIDTGIHSREWVTQA 77
Query: 65 XXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGYERAREAVEKW 113
A+ + Q+Y D T +L T I L NPDG+ W
Sbjct: 78 SGVWFAKKITQDYGQDAAFTAILDTLDIFLEIVTNPDGFAFTHSTNRMW 126
>pdb|1CPX|A Chain A, Beta Form Of Carboxypeptidase A (Residues 3-307) From
Bovine Pancreas In An Orthorhombic Crystal Form With Two
Zinc Ions In The Active Site.
pdb|1F57|A Chain A, Carboxypeptidase A Complex With D-Cysteine At 1.75 A
pdb|1M4L|A Chain A, Structure Of Native Carboxypeptidase A At 1.25 Resolution
pdb|1ARL|A Chain A, Carboxypeptidase A With Zn Removed
pdb|2RFH|A Chain A, Crystal Structure Analysis Of
Cpa-2-Benzyl-3-Nitropropanoic Acid Complex
Length = 307
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Query: 5 LEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEVVGRE 64
++ + +P L +G+S E R ++VL+ ST G ++P + +H E + +
Sbjct: 22 MDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFST-GGSNRPAI---WIDLGIHSREWITQA 77
Query: 65 XXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGYERAREAVEKW 113
A+ ++Y D T +L + I L NPDG+ W
Sbjct: 78 TGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNRLW 126
>pdb|1PYT|B Chain B, Ternary Complex Of Procarboxypeptidase A, Proproteinase E,
And Chymotrypsinogen C
pdb|3KGQ|A Chain A, Carboxypeptidase A Liganded To An Organic Small-Molecule:
Conformational Changes
Length = 309
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Query: 5 LEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEVVGRE 64
++ + +P L +G+S E R ++VL+ ST G ++P + +H E + +
Sbjct: 22 MDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFST-GGSNRPAI---WIDLGIHSREWITQA 77
Query: 65 XXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGYERAREAVEKW 113
A+ ++Y D T +L + I L NPDG+ W
Sbjct: 78 TGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNRLW 126
>pdb|1EE3|P Chain P, Cadmium-Substituted Bovine Pancreatic Carboxypeptidase A
(Alfa-Form) At Ph 7.5 And 2 Mm Chloride In Monoclinic
Crystal Form
pdb|1ELL|P Chain P, Cadmium-Substituted Bovine Pancreatic Carboxypeptidase A
(Alfa-Form) At Ph 7.5 And 0.25 M Chloride In Monoclinic
Crystal Form.
pdb|1ELM|P Chain P, Cadmium-Substituted Bovine Pacreatic Carboxypeptidase A
(Alfa-Form) At Ph 5.5 And 2 Mm Chloride In Monoclinic
Crystal Form.
pdb|1ZLH|A Chain A, Crystal Structure Of The Tick Carboxypeptidase Inhibitor
In Complex With Bovine Carboxypeptidase A
pdb|2ABZ|A Chain A, Crystal Structure Of C19aC43A MUTANT OF LEECH
Carboxypeptidase Inhibitor In Complex With Bovine
Carboxypeptidase A
pdb|2ABZ|B Chain B, Crystal Structure Of C19aC43A MUTANT OF LEECH
Carboxypeptidase Inhibitor In Complex With Bovine
Carboxypeptidase A
pdb|1ARM|A Chain A, Carboxypeptidase A With Zn Replaced By Hg
pdb|1YME|A Chain A, Structure Of Carboxypeptidase
pdb|3I1U|A Chain A, Carboxypeptidase A Inhibited By A Thiirane Mechanism-Based
Inactivator
pdb|3HLP|A Chain A, Carboxypeptidase A Liganded To An Organic Small-Molecule:
Conformational Changes
pdb|3HLP|B Chain B, Carboxypeptidase A Liganded To An Organic Small-Molecule:
Conformational Changes
pdb|3HUV|A Chain A, Carboxypeptidase A Liganded To An Organic Small-Molecule:
Conformational Changes
Length = 309
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Query: 5 LEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEVVGRE 64
++ + +P L +G+S E R ++VL+ ST G ++P + +H E + +
Sbjct: 22 MDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFST-GGSNRPAI---WIDLGIHSREWITQA 77
Query: 65 XXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGYERAREAVEKW 113
A+ ++Y D T +L + I L NPDG+ W
Sbjct: 78 TGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNRLW 126
>pdb|3FX6|A Chain A, X-Ray Crystallographic Studies On The Complex Of
Carboxypeptidase A With The Inhibitor Using Alpha-Nitro
Ketone As The Zinc-Binding Group
pdb|3FX6|C Chain C, X-Ray Crystallographic Studies On The Complex Of
Carboxypeptidase A With The Inhibitor Using Alpha-Nitro
Ketone As The Zinc-Binding Group
pdb|3FX6|E Chain E, X-Ray Crystallographic Studies On The Complex Of
Carboxypeptidase A With The Inhibitor Using Alpha-Nitro
Ketone As The Zinc-Binding Group
pdb|3FVL|A Chain A, Crystallogic Studies On The Complex Of Carboxypeptidase A
With Inhibitors Using Alpha-Hydroxy Ketone As
Zinc-Binding Group
pdb|3FVL|C Chain C, Crystallogic Studies On The Complex Of Carboxypeptidase A
With Inhibitors Using Alpha-Hydroxy Ketone As
Zinc-Binding Group
pdb|3FVL|E Chain E, Crystallogic Studies On The Complex Of Carboxypeptidase A
With Inhibitors Using Alpha-Hydroxy Ketone As
Zinc-Binding Group
Length = 307
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Query: 5 LEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEVVGRE 64
++ + +P L +G+S E R ++VL+ ST G ++P + +H E + +
Sbjct: 22 MDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFST-GGSNRPAI---WIDLGIHSREWITQA 77
Query: 65 XXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGYERAREAVEKW 113
A+ ++Y D T +L + I L NPDG+ W
Sbjct: 78 TGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNRLW 126
>pdb|1HDQ|A Chain A, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With D-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|2CTB|A Chain A, The High Resolution Crystal Structure Of The Complex
Between Carboxypeptidase A And L-Phenyl Lactate
pdb|2CTC|A Chain A, The High Resolution Crystal Structure Of The Complex
Between Carboxypeptidase A And L-Phenyl Lactate
Length = 307
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Query: 5 LEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEVVGRE 64
++ + +P L +G+S E R ++VL+ ST G ++P + +H E + +
Sbjct: 22 MDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFST-GGSNRPAI---WIDLGIHSREWITQA 77
Query: 65 XXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGYERAREAVEKW 113
A+ ++Y D T +L + I L NPDG+ W
Sbjct: 78 TGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNRLW 126
>pdb|1PCA|A Chain A, Three Dimensional Structure Of Porcine Pancreatic
Procarboxypeptidase A. A Comparison Of The A And B
Zymogens And Their Determinants For Inhibition And
Activation
Length = 403
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 5 LEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEVVGRE 64
++ + +P L +G+S E R ++VL+ ST G ++P + + +H E + +
Sbjct: 117 MDILVAEHPALVSKLQIGRSYEGRPIYVLKFST-GGSNRPAI---WIDSGIHSREWITQA 172
Query: 65 XXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGY 103
A+ + +NY + T +L + I L NP+G+
Sbjct: 173 SGVWFAKKITENYGQNSSFTAILDSMDIFLEIVTNPNGF 211
>pdb|1BAV|A Chain A, Carboxypeptidase A Complexed With
2-Benzyl-3-Iodo-Propanoic Acid (Bip)
pdb|1BAV|B Chain B, Carboxypeptidase A Complexed With
2-Benzyl-3-Iodo-Propanoic Acid (Bip)
pdb|1BAV|C Chain C, Carboxypeptidase A Complexed With
2-Benzyl-3-Iodo-Propanoic Acid (Bip)
pdb|1BAV|D Chain D, Carboxypeptidase A Complexed With
2-Benzyl-3-Iodo-Propanoic Acid (Bip)
Length = 309
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Query: 5 LEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYV-ANMHGNEVVGR 63
++ + +P L +G+S E R ++VL+ ST G ++P + ++ +H E + +
Sbjct: 22 MDLLVAQHPELVSKLQIGRSYEGRPIYVLKFST-GGSNRPAI----WIDLGIHSREWITQ 76
Query: 64 EXXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGYERAREAVEKW 113
A+ +NY + T +L + I L NP+G+ W
Sbjct: 77 ATGVWFAKKFTENYGQNPSFTAILDSMDIFLEIVTNPNGFAFTHSENRLW 126
>pdb|1CBX|A Chain A, Crystal Structure Of The Complex Between Carboxypeptidase
A And The Biproduct Analog Inhibitor L-Benzylsuccinate
At 2.0 Angstroms Resolution
pdb|1CPS|A Chain A, Structural Comparison Of Sulfodiimine And Sulfonamide
Inhibitors In Their Complexes With Zinc Enzymes
Length = 307
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Query: 5 LEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYV-ANMHGNEVVGR 63
++ + +P L +G+S E R ++VL+ ST G ++P + ++ +H E + +
Sbjct: 22 MDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFST-GGSNRPAI----WIDLGIHSREWITQ 76
Query: 64 EXXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGYERAREAVEKW 113
A+ +NY + T +L + I L NP+G+ W
Sbjct: 77 ATGVWFAKKFTENYGQNPSFTAILDSMDIFLEIVTNPNGFAFTHSENRLW 126
>pdb|1HDU|A Chain A, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With Aminocarbonylphenylalanine At 1.75 A
pdb|1HDU|B Chain B, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With Aminocarbonylphenylalanine At 1.75 A
pdb|1HDU|D Chain D, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With Aminocarbonylphenylalanine At 1.75 A
pdb|1HDU|E Chain E, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With Aminocarbonylphenylalanine At 1.75 A
pdb|1HEE|A Chain A, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With L-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|1HEE|B Chain B, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With L-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|1HEE|D Chain D, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With L-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|1HEE|E Chain E, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With L-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|1IY7|A Chain A, Crystal Structure Of Cpa And Sulfamide-based Inhibitor
Complex
pdb|5CPA|A Chain A, Refined Crystal Structure Of Carboxypeptidase A At 1.54
Angstroms Resolution.
pdb|6CPA|A Chain A, Crystal Structure Of The Complex Of Carboxypeptidase A
With A Strongly Bound Phosphonate In A New Crystalline
Form: Comparison With Structures Of Other Complexes
pdb|7CPA|A Chain A, Comparison Of The Structures Of Three Carboxypeptidase A-
Phosphonate Complexes Determined By X-Ray
Crystallography
pdb|8CPA|A Chain A, Comparison Of The Structures Of Three Carboxypeptidase A-
Phosphonate Complexes Determined By X-Ray
Crystallography
pdb|3CPA|A Chain A, X-Ray Crystallographic Investigation Of Substrate Binding
To Carboxypeptidase A At Subzero Temperature
pdb|4CPA|A Chain A, Refined Crystal Structure Of The Potato Inhibitor Complex
Of Carboxypeptidase A At 2.5 Angstroms Resolution
pdb|4CPA|B Chain B, Refined Crystal Structure Of The Potato Inhibitor Complex
Of Carboxypeptidase A At 2.5 Angstroms Resolution
Length = 307
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Query: 5 LEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYV-ANMHGNEVVGR 63
++ + +P L +G+S E R ++VL+ ST G ++P + ++ +H E + +
Sbjct: 22 MDLLVAQHPELVSKLQIGRSYEGRPIYVLKFST-GGSNRPAI----WIDLGIHSREWITQ 76
Query: 64 EXXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGYERAREAVEKW 113
A+ +NY + T +L + I L NP+G+ W
Sbjct: 77 ATGVWFAKKFTENYGQNPSFTAILDSMDIFLEIVTNPNGFAFTHSENRLW 126
>pdb|4A37|A Chain A, Metallo-Carboxypeptidase From Pseudomonas Aeruginosa
pdb|4A37|B Chain B, Metallo-Carboxypeptidase From Pseudomonas Aeruginosa
pdb|4A38|A Chain A, Metallo-Carboxypeptidase From Pseudomonas Aureginosa In
Complex With L-Benzylsuccinic Acid
pdb|4A38|B Chain B, Metallo-Carboxypeptidase From Pseudomonas Aureginosa In
Complex With L-Benzylsuccinic Acid
pdb|4A39|A Chain A, Metallo-Carboxypeptidase From Pseudomonas Aeruginosa In
Complex With (2-Guanidinoethylmercapto)succinic Acid
pdb|4A39|B Chain B, Metallo-Carboxypeptidase From Pseudomonas Aeruginosa In
Complex With (2-Guanidinoethylmercapto)succinic Acid
Length = 388
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 20 SVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEVVGREXXXXXAQYLCQNYKI 79
+VG SV+ R++ +L + HP H + +A H E + + L
Sbjct: 148 AVGTSVQGRDIELLRVRRHPDSHL----KLWVIAQQHPGEHMAEWFMEGLIERL--QRPD 201
Query: 80 DDRVTRMLQTTRIHLMPSMNPDG 102
D + R+L+ ++L+P+MNPDG
Sbjct: 202 DTEMQRLLEKADLYLVPNMNPDG 224
>pdb|3D4U|A Chain A, Bovine Thrombin-Activatable Fibrinolysis Inhibitor (Tafia)
In Complex With Tick-Derived Carboxypeptidase Inhibitor
Length = 309
Score = 34.7 bits (78), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 62/159 (38%), Gaps = 9/159 (5%)
Query: 5 LEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEVVGRE 64
+E +T+ YP++ +G S EK L+VL++S K + +H E +
Sbjct: 19 IEVMTERYPDMVEKIHIGSSYEKYPLYVLKVSKKEQRAKNAMW---IDCGIHAREWISPA 75
Query: 65 XXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGYERAREAVEKWLQDIPFVLSAN 124
+ Y + T +L+ ++MP +N DGY+ W +D + + +
Sbjct: 76 FCLWFVGSVTYYYGKEKMHTNLLKHMDFYIMPVVNVDGYDYT------WKKDRMWRKNRS 129
Query: 125 LHGGSLVANYPYDDNQAMKPQVDSPTPDDSIFKLLASSY 163
LH + + N A K S ++ +Y
Sbjct: 130 LHEKNACVGTDLNRNFASKHWCGEGASSSSCSEIYCGTY 168
>pdb|3DGV|A Chain A, Crystal Structure Of Thrombin Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3DGV|B Chain B, Crystal Structure Of Thrombin Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3DGV|C Chain C, Crystal Structure Of Thrombin Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3OSL|A Chain A, Structure Of Bovine Thrombin-Activatable Fibrinolysis
Inhibitor In Complex With Tick Carboxypeptidase
Inhibitor
pdb|3OSL|C Chain C, Structure Of Bovine Thrombin-Activatable Fibrinolysis
Inhibitor In Complex With Tick Carboxypeptidase
Inhibitor
Length = 401
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 64/160 (40%), Gaps = 11/160 (6%)
Query: 5 LEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYV-ANMHGNEVVGR 63
+E +T+ YP++ +G S EK L+VL++S K + ++ +H E +
Sbjct: 111 IEVMTERYPDMVEKIHIGSSYEKYPLYVLKVSKKEQRAKNAM----WIDCGIHAREWISP 166
Query: 64 EXXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGYERAREAVEKWLQDIPFVLSA 123
+ Y + T +L+ ++MP +N DGY+ W +D + +
Sbjct: 167 AFCLWFVGSVTYYYGKEKMHTNLLKHMDFYIMPVVNVDGYDYT------WKKDRMWRKNR 220
Query: 124 NLHGGSLVANYPYDDNQAMKPQVDSPTPDDSIFKLLASSY 163
+LH + + N A K S ++ +Y
Sbjct: 221 SLHEKNACVGTDLNRNFASKHWCGEGASSSSCSEIYCGTY 260
>pdb|1JQG|A Chain A, Crystal Structure Of The Carboxypeptidase A From
Helicoverpa Armigera
Length = 433
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 1 MQAELEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEV 60
+ A L+ + K +PN+ + G+S E R + L +ST P + +H E
Sbjct: 127 VDAYLQELAKEFPNVVTVVEGGKSFEGRSIKYLRIST-TNFQDASKPVVMMQSLLHCREW 185
Query: 61 VGREXXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGY 103
V Y ID + ++ ++P NPDGY
Sbjct: 186 V----TLPATLYAIHKLVIDVTESDLINNIDWIILPVANPDGY 224
>pdb|2KWP|A Chain A, Solution Structure Of The Aminoterminal Domain Of E. Coli
Nusa
Length = 129
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 151 PDDSIFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHAN 210
P + IF+ L S+ A A KK Y+ + G +W VV Q
Sbjct: 19 PREKIFEALESALATATKKKYEQEIDVRVQIDRKSGDFDTFRRWLVVDEVTQ-------P 71
Query: 211 TLEITLELGCYKFPPAKDLPSYWEDNLPAL 240
T EITLE Y+ + +L Y ED + ++
Sbjct: 72 TKEITLEAARYE-DESLNLGDYVEDQIESV 100
>pdb|2C1C|A Chain A, Structural Basis Of The Resistance Of An Insect
Carboxypeptidase To Plant Protease Inhibitors
pdb|2C1C|B Chain B, Structural Basis Of The Resistance Of An Insect
Carboxypeptidase To Plant Protease Inhibitors
Length = 312
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 44/100 (44%), Gaps = 5/100 (5%)
Query: 5 LEHITKNYPNLTRLYSVGQSVEKRELWVLELSTHPGVHKPGVPEFKYVANMHGNEVVGRE 64
L++I + YP++ + + +S E R + +++ST P +H E +
Sbjct: 16 LDYIGEKYPDVATVVNAAESFEGRPIKYIKIST-TNFEDENKPVIFIDGGIHAREWISPP 74
Query: 65 XXXXXAQYLCQNYKIDDRVTRMLQTTRIHLMPSMNPDGYE 104
L ++ +D +L+ L+P +NPDGY+
Sbjct: 75 SVTWAIHKLVEDVTEND----LLEKFDWILLPVVNPDGYK 110
>pdb|3NF4|A Chain A, Crystal Structure Of Acyl-Coa Dehydrogenase From
Mycobacterium Thermoresistibile Bound To Flavin Adenine
Dinucleotide
pdb|3NF4|B Chain B, Crystal Structure Of Acyl-Coa Dehydrogenase From
Mycobacterium Thermoresistibile Bound To Flavin Adenine
Dinucleotide
Length = 387
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 176 CPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCYKFP 224
C P + G ++NG++ ++ GG D+ + A T E + + C+ P
Sbjct: 149 CAATPTDG--GYVINGSKSWITHGGKADFYTLFARTGEGSRGVSCFLVP 195
>pdb|1LQ9|A Chain A, Crystal Structure Of A Monooxygenase From The Gene
Actva-Orf6 Of Streptomyces Coelicolor Strain A3(2)
pdb|1LQ9|B Chain B, Crystal Structure Of A Monooxygenase From The Gene
Actva-Orf6 Of Streptomyces Coelicolor Strain A3(2)
pdb|1N5Q|A Chain A, Crystal Structure Of A Monooxygenase From The Gene
Actva-Orf6 Of Streptomyces Coelicolor In Complex With
Dehydrated Sancycline
pdb|1N5Q|B Chain B, Crystal Structure Of A Monooxygenase From The Gene
Actva-Orf6 Of Streptomyces Coelicolor In Complex With
Dehydrated Sancycline
pdb|1N5S|A Chain A, Crystal Structure Of A Monooxygenase From The Gene
Actva-Orf6 Of Streptomyces Coelicolor In Complex With
The Ligand Acetyl Dithranol
pdb|1N5S|B Chain B, Crystal Structure Of A Monooxygenase From The Gene
Actva-Orf6 Of Streptomyces Coelicolor In Complex With
The Ligand Acetyl Dithranol
pdb|1N5T|A Chain A, Crystal Structure Of A Monooxygenase From The Gene
Actva-Orf6 Of Streptomyces Coelicolor In Complex With
The Ligand Oxidized Acetyl Dithranol
pdb|1N5T|B Chain B, Crystal Structure Of A Monooxygenase From The Gene
Actva-Orf6 Of Streptomyces Coelicolor In Complex With
The Ligand Oxidized Acetyl Dithranol
pdb|1N5V|A Chain A, Crystal Structure Of A Monooxygenase From The Gene
Actva-orf6 Of Streptomyces Coelicolor In Complex With
The Ligand Nanaomycin D
pdb|1N5V|B Chain B, Crystal Structure Of A Monooxygenase From The Gene
Actva-orf6 Of Streptomyces Coelicolor In Complex With
The Ligand Nanaomycin D
Length = 112
Score = 27.7 bits (60), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 104 ERAREAVEKWLQDIPFVLSANLHG---GSLVANYP-YDDNQAMK 143
E A V++W++++P LSA H G+ V NY ++ QA +
Sbjct: 29 ELATGGVQEWIREVPGFLSATYHASTDGTAVVNYAQWESEQAYR 72
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.135 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,587,622
Number of Sequences: 62578
Number of extensions: 468703
Number of successful extensions: 1049
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 986
Number of HSP's gapped (non-prelim): 49
length of query: 305
length of database: 14,973,337
effective HSP length: 98
effective length of query: 207
effective length of database: 8,840,693
effective search space: 1830023451
effective search space used: 1830023451
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)