BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17405
(241 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3MN8|A Chain A, Structure Of Drosophila Melanogaster Carboxypeptidase D
Isoform 1b Short
pdb|3MN8|B Chain B, Structure Of Drosophila Melanogaster Carboxypeptidase D
Isoform 1b Short
pdb|3MN8|C Chain C, Structure Of Drosophila Melanogaster Carboxypeptidase D
Isoform 1b Short
pdb|3MN8|D Chain D, Structure Of Drosophila Melanogaster Carboxypeptidase D
Isoform 1b Short
Length = 435
Score = 185 bits (470), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/193 (44%), Positives = 133/193 (68%), Gaps = 4/193 (2%)
Query: 39 DPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRN 98
+ E FL+ PHY S ++L + P++ K+H +G+S++ R+L ALQISRN S RN
Sbjct: 30 EDESFLQQPHYASQEQLEDLFAGLEKAYPNQAKVHFLGRSLEGRNLLALQISRNTRS-RN 88
Query: 99 LLKPMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGY 158
LL P KY+AN+HGDE VG +L+ Y+ +YL+ N + +L+N+TDI+++P++NPDGY
Sbjct: 89 LLTPPVKYIANMHGDETVGRQLLVYMAQYLLGNHERISDLGQLVNSTDIYLVPTMNPDGY 148
Query: 159 SAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFI 218
+ ++EG+C SL ++VGR NA +DLNR+FPD+ + S + L + +PET A++++I
Sbjct: 149 ALSQEGNCESLPNYVGRGNAANIDLNRDFPDRLEQSHVHQ---LRAQSRQPETAALVNWI 205
Query: 219 KNNPFVLSGNLHG 231
+ PFVLS N HG
Sbjct: 206 VSKPFVLSANFHG 218
>pdb|1UWY|A Chain A, Crystal Structure Of Human Carboxypeptidase M
Length = 426
Score = 157 bits (396), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 85/183 (46%), Positives = 113/183 (61%), Gaps = 13/183 (7%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y + + FL AQ S LHSIGKSV+ R+LW L + R R + P FKYVA
Sbjct: 5 YHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRFPKEHR-IGIPEFKYVA 63
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNS 168
N+HGDE VG EL+ +LI+YL+ +DG D +T LIN+T I I+PS+NPDG+ A K+ C
Sbjct: 64 NMHGDETVGRELLLHLIDYLVTSDGKDPEITNLINSTRIHIMPSMNPDGFEAVKKPDC-- 121
Query: 169 LASFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGN 228
+GR N N DLNRNFPD F+ ++ R +PET+A++ ++K FVLS N
Sbjct: 122 -YYSIGRENYNQYDLNRNFPDAFEYNNVSR---------QPETVAVMKWLKTETFVLSAN 171
Query: 229 LHG 231
LHG
Sbjct: 172 LHG 174
>pdb|1QMU|A Chain A, Duck Carboxypeptidase D Domain Ii
pdb|1H8L|A Chain A, Duck Carboxypeptidase D Domain Ii In Complex With Gemsa
Length = 380
Score = 156 bits (395), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 116/180 (64%), Gaps = 13/180 (7%)
Query: 52 FDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIH 111
F ++ FL A + PS +L+S+GKSV+ R+L+ ++IS N +P FKY+ N+H
Sbjct: 13 FSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGI-HEAGEPEFKYIGNMH 71
Query: 112 GDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLAS 171
G+EVVG EL+ LIEYL N GTD VT L+ +T I I+PS+NPDGY ++EG
Sbjct: 72 GNEVVGRELLLNLIEYLCKNFGTDPEVTDLVQSTRIHIMPSMNPDGYEKSQEG---DRGG 128
Query: 172 FVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHG 231
VGRNN+N DLNRNFPDQF ++ +PETLA++S++K PFVLS NLHG
Sbjct: 129 TVGRNNSNNYDLNRNFPDQFFQVTD---------PPQPETLAVMSWLKTYPFVLSANLHG 179
>pdb|2NSM|A Chain A, Crystal Structure Of The Human Carboxypeptidase N
(kininase I) Catalytic Domain
Length = 439
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 110/191 (57%), Gaps = 12/191 (6%)
Query: 52 FDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIH 111
+D+L + L + P +++SIG+SV+ R L+ L+ S + L+P KYV N+H
Sbjct: 9 YDDLVRTLYKVQNECPGITRVYSIGRSVEGRHLYVLEFSDHPGI-HEPLEPEVKYVGNMH 67
Query: 112 GDEVVGYELMNYLIEYLIIN-DGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLA 170
G+E +G ELM L E+L ++R+ +LI T I I+PS+NPDGY A N
Sbjct: 68 GNEALGRELMLQLSEFLCEEFRNRNQRIVQLIQDTRIHILPSMNPDGYEVAAAQGPNKPG 127
Query: 171 SFVGRNNANGVDLNRNFPD---------QFDSSSERREQPLNVK-KLEPETLAMISFIKN 220
VGRNNANGVDLNRNFPD ++ + P N K ++EPET A+I ++ +
Sbjct: 128 YLVGRNNANGVDLNRNFPDLNTYIYYNEKYGGPNHHLPLPDNWKSQVEPETRAVIRWMHS 187
Query: 221 NPFVLSGNLHG 231
FVLS NLHG
Sbjct: 188 FNFVLSANLHG 198
>pdb|3V38|A Chain A, Carboxypeptidase T Mutant L254n
Length = 326
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 18/149 (12%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y +++E+ + A P+ VK SIGKS + R+LWA++IS NV + N +P Y A
Sbjct: 9 YHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDEN--EPEVLYTA 66
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDG----------Y 158
H E + E+ Y ++ N D R+T L+N +I+I+ ++NPDG
Sbjct: 67 LHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDGGEYDISSGSYK 126
Query: 159 SAAKEGSCNSLASFVGRNNANGVDLNRNF 187
S K NS +S+V G DLNRN+
Sbjct: 127 SWRKNRQPNSGSSYV------GTDLNRNY 149
>pdb|3QNV|A Chain A, Carboxypeptidase T
pdb|4DJL|A Chain A, Carboxypeptidase T With N-sulfamoyl-l-phenylalanine
Length = 323
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 18/149 (12%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y +++E+ + A P+ VK SIGKS + R+LWA++IS NV + N +P Y A
Sbjct: 9 YHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDEN--EPEVLYTA 66
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDG----------Y 158
H E + E+ Y ++ N D R+T L+N +I+I+ ++NPDG
Sbjct: 67 LHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDGGEYDISSGSYK 126
Query: 159 SAAKEGSCNSLASFVGRNNANGVDLNRNF 187
S K NS +S+V G DLNRN+
Sbjct: 127 SWRKNRQPNSGSSYV------GTDLNRNY 149
>pdb|3PRT|A Chain A, Mutant Of The Carboxypeptidase T
Length = 323
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 18/149 (12%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y +++E+ + A P+ VK SIGKS + R+LWA++IS NV + N +P Y A
Sbjct: 9 YHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDEN--EPEVLYTA 66
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDG----------Y 158
H E + E+ Y ++ N D R+T L+N +I+I+ ++NPDG
Sbjct: 67 LHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDGGEYDISSGSYK 126
Query: 159 SAAKEGSCNSLASFVGRNNANGVDLNRNF 187
S K NS +S+V G DLNRN+
Sbjct: 127 SWRKNRQPNSGSSYV------GTDLNRNY 149
>pdb|1OBR|A Chain A, Carboxypeptidase T
pdb|3V7Z|A Chain A, Carboxypeptidase T With Gemsa
pdb|4DUK|A Chain A, Carboxypeptidase T With L-benzylsuccinic Acid
Length = 326
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 18/149 (12%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y +++E+ + A P+ VK SIGKS + R+LWA++IS NV + N +P Y A
Sbjct: 9 YHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDEN--EPEVLYTA 66
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDG----------Y 158
H E + E+ Y ++ N D R+T L+N +I+I+ ++NPDG
Sbjct: 67 LHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDGGEYDISSGSYK 126
Query: 159 SAAKEGSCNSLASFVGRNNANGVDLNRNF 187
S K NS +S+V G DLNRN+
Sbjct: 127 SWRKNRQPNSGSSYV------GTDLNRNY 149
>pdb|3LMS|A Chain A, Structure Of Human Activated Thrombin-Activatable
Fibrinolys Inhibitor, Tafia, In Complex With
Tick-Derived Funnelin Inh Tci
Length = 309
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 12/181 (6%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y S +E+ ++ +++P + IG S + L+ L++S + +N +
Sbjct: 9 YHSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKVSGKEQAAKNAIWID----C 64
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDG--YSAAKEGSC 166
IH E + + I ++ G + T L+ D +++P +N DG YS K
Sbjct: 65 GIHAREWISPAFCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPVVNVDGYDYSWKKNRMW 124
Query: 167 NSLASFVGRNNANGVDLNRNFP-----DQFDSSSERREQPLNVK-KLEPETLAMISFIKN 220
SF N+ G DLNRNF ++ SSS E + + EPE A+ SF++
Sbjct: 125 RKNRSFYANNHCIGTDLNRNFASKHWCEEGASSSSCSETYCGLYPESEPEVKAVASFLRR 184
Query: 221 N 221
N
Sbjct: 185 N 185
>pdb|1JQG|A Chain A, Crystal Structure Of The Carboxypeptidase A From
Helicoverpa Armigera
Length = 433
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 51 SFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANI 110
S++E+ +L A++ P+ V + GKS + R + L+IS + ++ KP+ + +
Sbjct: 123 SYEEVDAYLQELAKEFPNVVTVVEGGKSFEGRSIKYLRIS--TTNFQDASKPVVMMQSLL 180
Query: 111 HGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGS----C 166
H E V Y I L+I D + LIN D I+P NPDGY G
Sbjct: 181 HCREWVTLPATLYAIHKLVI----DVTESDLINNIDWIILPVANPDGYVHTFGGDRYWRK 236
Query: 167 NSLASFVGRNNANGVDLNRNFPDQFDSSS 195
N ++ N GVDLNRNF + ++S
Sbjct: 237 NRATGYMAGNLCMGVDLNRNFGMNWGTAS 265
>pdb|3D68|A Chain A, Crystal Structure Of A T325i/t329i/h333y/h335q Mutant Of
Thrombin- Activatable Fibrinolysis Inhibitor (tafi-iiyq)
pdb|3D68|B Chain B, Crystal Structure Of A T325i/t329i/h333y/h335q Mutant Of
Thrombin- Activatable Fibrinolysis Inhibitor (tafi-iiyq)
pdb|3D68|C Chain C, Crystal Structure Of A T325i/t329i/h333y/h335q Mutant Of
Thrombin- Activatable Fibrinolysis Inhibitor (tafi-iiyq)
Length = 424
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 12/182 (6%)
Query: 48 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 107
Y S +E+ ++ +++P + IG S + L+ L++S + +N +
Sbjct: 123 QYHSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKVSGKEQTAKNAIWID---- 178
Query: 108 ANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDG--YSAAKEGS 165
IH E + + I ++ G + T L+ D +++P +N DG YS K
Sbjct: 179 CGIHAREWISPAFCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPVVNVDGYDYSWKKNRM 238
Query: 166 CNSLASFVGRNNANGVDLNRNFP-----DQFDSSSERREQPLNVK-KLEPETLAMISFIK 219
SF N+ G DLNRNF ++ SSS E + + EPE A+ SF++
Sbjct: 239 WRKNRSFYANNHCIGTDLNRNFASKHWCEEGASSSSCSETYCGLYPESEPEVKAVASFLR 298
Query: 220 NN 221
N
Sbjct: 299 RN 300
>pdb|3D66|A Chain A, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3D66|B Chain B, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3D66|C Chain C, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3D67|A Chain A, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi) In Complex With
2-Guanidino-Ethyl-Mercaptosuccinic Acid (Gemsa)
pdb|3D67|B Chain B, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi) In Complex With
2-Guanidino-Ethyl-Mercaptosuccinic Acid (Gemsa)
pdb|3D67|C Chain C, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi) In Complex With
2-Guanidino-Ethyl-Mercaptosuccinic Acid (Gemsa)
Length = 424
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 12/181 (6%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y S +E+ ++ +++P + IG S + L+ L++S + +N +
Sbjct: 124 YHSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKVSGKEQTAKNAIWID----C 179
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDG--YSAAKEGSC 166
IH E + + I ++ G + T L+ D +++P +N DG YS K
Sbjct: 180 GIHAREWISPAFCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPVVNVDGYDYSWKKNRMW 239
Query: 167 NSLASFVGRNNANGVDLNRNFP-----DQFDSSSERREQPLNVK-KLEPETLAMISFIKN 220
SF N+ G DLNRNF ++ SSS E + + EPE A+ SF++
Sbjct: 240 RKNRSFYANNHCIGTDLNRNFASKHWCEEGASSSSCSETYCGLYPESEPEVKAVASFLRR 299
Query: 221 N 221
N
Sbjct: 300 N 300
>pdb|1AYE|A Chain A, Human Procarboxypeptidase A2
Length = 401
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y + +E+++ + ++P V +IG S +NR + L+ S +G + KP A
Sbjct: 105 YHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFS----TGGD--KPAIWLDA 158
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGY--SAAKEGSC 166
IH E V + ++ + G D +T +++ DIF++P NPDGY S K
Sbjct: 159 GIHAREWVTQATALWTANKIVSDYGKDPSITSILDALDIFLLPVTNPDGYVFSQTKNRMW 218
Query: 167 NSLASFVGRNNANGVDLNRNFPDQF 191
S V + GVD NRN+ F
Sbjct: 219 RKTRSKVSGSLCVGVDPNRNWDAGF 243
>pdb|4A37|A Chain A, Metallo-Carboxypeptidase From Pseudomonas Aeruginosa
pdb|4A37|B Chain B, Metallo-Carboxypeptidase From Pseudomonas Aeruginosa
pdb|4A38|A Chain A, Metallo-Carboxypeptidase From Pseudomonas Aureginosa In
Complex With L-Benzylsuccinic Acid
pdb|4A38|B Chain B, Metallo-Carboxypeptidase From Pseudomonas Aureginosa In
Complex With L-Benzylsuccinic Acid
pdb|4A39|A Chain A, Metallo-Carboxypeptidase From Pseudomonas Aeruginosa In
Complex With (2-Guanidinoethylmercapto)succinic Acid
pdb|4A39|B Chain B, Metallo-Carboxypeptidase From Pseudomonas Aeruginosa In
Complex With (2-Guanidinoethylmercapto)succinic Acid
Length = 388
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 35/162 (21%)
Query: 74 SIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIINDG 133
++G SVQ RD+ L++ R+ S L +A H E + M LIE L D
Sbjct: 148 AVGTSVQGRDIELLRVRRHPDSHLKLW-----VIAQQHPGEHMAEWFMEGLIERLQRPDD 202
Query: 134 TDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVG--RNNANGVDLNRNFPDQF 191
T+ + RL+ D++++P++NPDG +F G R NA G DLNR +
Sbjct: 203 TE--MQRLLEKADLYLVPNMNPDG-------------AFHGNLRTNAAGQDLNRAW---L 244
Query: 192 DSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGKK 233
+ S+ER PE + +K + L ++HG +
Sbjct: 245 EPSAER----------SPEVWFVQQEMKRHGVDLFLDIHGDE 276
>pdb|3D4U|A Chain A, Bovine Thrombin-Activatable Fibrinolysis Inhibitor (Tafia)
In Complex With Tick-Derived Carboxypeptidase Inhibitor
Length = 309
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 12/181 (6%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y S +E+ ++ ++ P V+ IG S + L+ L++S+ +N +
Sbjct: 9 YHSLNEIYSWIEVMTERYPDMVEKIHIGSSYEKYPLYVLKVSKKEQRAKNAMWID----C 64
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDG--YSAAKEGSC 166
IH E + + + + G ++ T L+ D +I+P +N DG Y+ K+
Sbjct: 65 GIHAREWISPAFCLWFVGSVTYYYGKEKMHTNLLKHMDFYIMPVVNVDGYDYTWKKDRMW 124
Query: 167 NSLASFVGRNNANGVDLNRNFPDQF------DSSSERREQPLNVKKLEPETLAMISFIKN 220
S +N G DLNRNF + SSS + EPE A+ F++
Sbjct: 125 RKNRSLHEKNACVGTDLNRNFASKHWCGEGASSSSCSEIYCGTYPESEPEVKAVADFLRR 184
Query: 221 N 221
N
Sbjct: 185 N 185
>pdb|1ZLI|A Chain A, Crystal Structure Of The Tick Carboxypeptidase Inhibitor
In Complex With Human Carboxypeptidase B
Length = 309
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 14/181 (7%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y +++ + + A +NP+ + IG + + R ++ L++ + +G+N KP
Sbjct: 11 YNNWETIEAWTQQVATENPALISRSVIGTTFEGRAIYLLKVGK---AGQN--KPAIFMDC 65
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDG--YSAAKEGSC 166
H E + + + + G + +VT L+N D +++P LN DG Y+ K
Sbjct: 66 GFHAREWISPAFCQWFVREAVRTYGREIQVTELLNKLDFYVLPVLNIDGYIYTWTKSRFW 125
Query: 167 NSLASFVGRNNANGVDLNRNFPDQFDSSSERREQPLN------VKKLEPETLAMISFIKN 220
S ++ G D NRNF + R P + + E ET A+ FI+N
Sbjct: 126 RKTRSTHTGSSCIGTDPNRNFDAGWCEIGASR-NPCDETYCGPAAESEKETKALADFIRN 184
Query: 221 N 221
Sbjct: 185 K 185
>pdb|3DGV|A Chain A, Crystal Structure Of Thrombin Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3DGV|B Chain B, Crystal Structure Of Thrombin Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3DGV|C Chain C, Crystal Structure Of Thrombin Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3OSL|A Chain A, Structure Of Bovine Thrombin-Activatable Fibrinolysis
Inhibitor In Complex With Tick Carboxypeptidase
Inhibitor
pdb|3OSL|C Chain C, Structure Of Bovine Thrombin-Activatable Fibrinolysis
Inhibitor In Complex With Tick Carboxypeptidase
Inhibitor
Length = 401
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 78/182 (42%), Gaps = 14/182 (7%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV- 107
Y S +E+ ++ ++ P V+ IG S + L+ L++S+ +N + ++
Sbjct: 101 YHSLNEIYSWIEVMTERYPDMVEKIHIGSSYEKYPLYVLKVSKKEQRAKNAM-----WID 155
Query: 108 ANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDG--YSAAKEGS 165
IH E + + + + G ++ T L+ D +I+P +N DG Y+ K+
Sbjct: 156 CGIHAREWISPAFCLWFVGSVTYYYGKEKMHTNLLKHMDFYIMPVVNVDGYDYTWKKDRM 215
Query: 166 CNSLASFVGRNNANGVDLNRNFPDQF------DSSSERREQPLNVKKLEPETLAMISFIK 219
S +N G DLNRNF + SSS + EPE A+ F++
Sbjct: 216 WRKNRSLHEKNACVGTDLNRNFASKHWCGEGASSSSCSEIYCGTYPESEPEVKAVADFLR 275
Query: 220 NN 221
N
Sbjct: 276 RN 277
>pdb|1KWM|A Chain A, Human Procarboxypeptidase B: Three-Dimensional Structure
And Implications For Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|1KWM|B Chain B, Human Procarboxypeptidase B: Three-Dimensional Structure
And Implications For Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
Length = 402
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 14/180 (7%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y ++ + + A +NP+ + IG + + R ++ L++ + +G+N KP
Sbjct: 104 YNKWETIEAWTQQVATENPALISRSVIGTTFEGRAIYLLKVGK---AGQN--KPAIFMDC 158
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDG--YSAAKEGSC 166
H E + + + + G + +VT L+N D +++P LN DG Y+ K
Sbjct: 159 GFHAREWISPAFCQWFVREAVRTYGREIQVTELLNKLDFYVLPVLNIDGYIYTWTKSRFW 218
Query: 167 NSLASFVGRNNANGVDLNRNFPDQFDSSSERREQPLN------VKKLEPETLAMISFIKN 220
S ++ G D NRNF + R P + + E ET A+ FI+N
Sbjct: 219 RKTRSTHTGSSCIGTDPNRNFDAGWCEIGASR-NPCDETYCGPAAESEKETKALADFIRN 277
>pdb|1DTD|A Chain A, Crystal Structure Of The Complex Between The Leech
Carboxypeptidase Inhibitor And The Human
Carboxypeptidase A2 (Lci-Cpa2)
Length = 303
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y + +E+++ + ++P V +IG S +NR + L+ S +G + KP A
Sbjct: 6 YHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFS----TGGD--KPAIWLDA 59
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGY--SAAKEGSC 166
IH E V + ++ + G D +T +++ DIF++P NPDGY S K
Sbjct: 60 GIHAREWVTQATALWTANKIVSDYGKDPSITSILDALDIFLLPVTNPDGYVFSQTKNRMW 119
Query: 167 NSLASFVGRNN-ANGVDLNRNFPDQF 191
S V + GVD NRN+ F
Sbjct: 120 RKTRSKVSAGSLCVGVDPNRNWDAGF 145
>pdb|1Z5R|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
pdb|1Z5R|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
pdb|1Z5R|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
pdb|1ZG7|A Chain A, Crystal Structure Of 2-(5-{[amino(Imino)methyl]amino}-2-
Chlorophenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG7|B Chain B, Crystal Structure Of 2-(5-{[amino(Imino)methyl]amino}-2-
Chlorophenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG7|C Chain C, Crystal Structure Of 2-(5-{[amino(Imino)methyl]amino}-2-
Chlorophenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG8|A Chain A, Crystal Structure Of (R)-2-(3-{[amino(Imino)
Methyl]amino}phenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG8|B Chain B, Crystal Structure Of (R)-2-(3-{[amino(Imino)
Methyl]amino}phenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG8|C Chain C, Crystal Structure Of (R)-2-(3-{[amino(Imino)
Methyl]amino}phenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG9|A Chain A, Crystal Structure Of 5-{[amino(Imino)methyl]amino}-2-
(Sulfanylmethyl)pentanoic Acid Bound To Activated
Porcine Pancreatic Carboxypeptidase B
pdb|1ZG9|B Chain B, Crystal Structure Of 5-{[amino(Imino)methyl]amino}-2-
(Sulfanylmethyl)pentanoic Acid Bound To Activated
Porcine Pancreatic Carboxypeptidase B
pdb|1ZG9|C Chain C, Crystal Structure Of 5-{[amino(Imino)methyl]amino}-2-
(Sulfanylmethyl)pentanoic Acid Bound To Activated
Porcine Pancreatic Carboxypeptidase B
pdb|2JEW|A Chain A, Crystal Structure Of ( (2s)-5-Amino-2-((1-N-Propyl-1h-
Imidazol-4-Yl)methyl)pentanoic Acid) Uk396,082 A Tafia
Inhibitor, Bound To Activated Porcine Pancreatic
Carboxypeptidaseb
pdb|2PIY|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
(S)-2-(3-Aminomethyl-Phenyl)-3-{hydroxy-
[(R)-2-Methyl-1-(3-Phenyl-Propane-1-Sulfonylamino)-
Propyl]- Phosphinoyl}-Propionic Acid {zk 528} Complex
pdb|2PIY|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
(S)-2-(3-Aminomethyl-Phenyl)-3-{hydroxy-
[(R)-2-Methyl-1-(3-Phenyl-Propane-1-Sulfonylamino)-
Propyl]- Phosphinoyl}-Propionic Acid {zk 528} Complex
pdb|2PIY|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
(S)-2-(3-Aminomethyl-Phenyl)-3-{hydroxy-
[(R)-2-Methyl-1-(3-Phenyl-Propane-1-Sulfonylamino)-
Propyl]- Phosphinoyl}-Propionic Acid {zk 528} Complex
pdb|2PIZ|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Guanidino-Phenyl)-3-[hydroxy-(3-
Phenyl-Propyl)-Phosphinoyl]-Propionic Acid Complex
pdb|2PIZ|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Guanidino-Phenyl)-3-[hydroxy-(3-
Phenyl-Propyl)-Phosphinoyl]-Propionic Acid Complex
pdb|2PIZ|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Guanidino-Phenyl)-3-[hydroxy-(3-
Phenyl-Propyl)-Phosphinoyl]-Propionic Acid Complex
pdb|2PJ0|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-2-Methyl-
Propyl)-Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-
Acetic Acid Complex
pdb|2PJ0|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-2-Methyl-
Propyl)-Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-
Acetic Acid Complex
pdb|2PJ0|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-2-Methyl-
Propyl)-Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-
Acetic Acid Complex
pdb|2PJ1|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-aminomethyl-phenyl)-[((r)-1-
Benzyloxycarbonylamino-2-methyl-propyl)-hydroxy-
Phosphinoyloxy]-acetic Acid Complex
pdb|2PJ1|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-aminomethyl-phenyl)-[((r)-1-
Benzyloxycarbonylamino-2-methyl-propyl)-hydroxy-
Phosphinoyloxy]-acetic Acid Complex
pdb|2PJ1|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-aminomethyl-phenyl)-[((r)-1-
Benzyloxycarbonylamino-2-methyl-propyl)-hydroxy-
Phosphinoyloxy]-acetic Acid Complex
pdb|2PJ2|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzyloxycarbonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]-Propionic Acid Complex
pdb|2PJ2|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzyloxycarbonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]-Propionic Acid Complex
pdb|2PJ2|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzyloxycarbonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]-Propionic Acid Complex
pdb|2PJ3|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-Guanidino-Phenyl)-{hydroxy-[(R)-2-
Methyl-1-(3-Phenyl-Propionylamino)-Propyl]-
Phosphinoyloxy}- Acetic Acid Complex
pdb|2PJ3|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-Guanidino-Phenyl)-{hydroxy-[(R)-2-
Methyl-1-(3-Phenyl-Propionylamino)-Propyl]-
Phosphinoyloxy}- Acetic Acid Complex
pdb|2PJ3|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-Guanidino-Phenyl)-{hydroxy-[(R)-2-
Methyl-1-(3-Phenyl-Propionylamino)-Propyl]-
Phosphinoyloxy}- Acetic Acid Complex
pdb|2PJ4|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-Benzyloxycarbonylamino-Cyclohexyl-
Methyl)-Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-
Acetic Acid Complex
pdb|2PJ4|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-Benzyloxycarbonylamino-Cyclohexyl-
Methyl)-Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-
Acetic Acid Complex
pdb|2PJ5|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-Hexyl)-
Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-Acetic Acid
Complex
pdb|2PJ5|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-Hexyl)-
Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-Acetic Acid
Complex
pdb|2PJ5|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-Hexyl)-
Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-Acetic Acid
Complex
pdb|2PJ6|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-{hydroxy-
[(R)-2-Methyl-1-(2-Phenyl-Ethanesulfonylamino)-Propyl]-
Phosphinoyl}-Propionic Acid Complex
pdb|2PJ7|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzenesulfonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]- Propionic Acid Complex
pdb|2PJ7|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzenesulfonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]- Propionic Acid Complex
pdb|2PJ7|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzenesulfonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]- Propionic Acid Complex
pdb|2PJ8|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-{[(R)-1-
(Biphenyl-4-Sulfonylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-Propionic Acid Complex
pdb|2PJ8|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-{[(R)-1-
(Biphenyl-4-Sulfonylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-Propionic Acid Complex
pdb|2PJ8|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-{[(R)-1-
(Biphenyl-4-Sulfonylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-Propionic Acid Complex
pdb|2PJ9|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-{[(R)-1-
(Benzo[1,2,
5]thiadiazole-4-Sulfonylamino)-2-Methyl-Propyl]-
Hydroxy-Phosphinoyl}-Propionic Acid Complex
pdb|2PJA|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
3-{[(R)-1-((S)-2-Benzyloxycarbonylamino-
3-Phenyl-Propionylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-2-(3-Guanidino-Phenyl)-Propionic Acid
Complex
pdb|2PJA|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
3-{[(R)-1-((S)-2-Benzyloxycarbonylamino-
3-Phenyl-Propionylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-2-(3-Guanidino-Phenyl)-Propionic Acid
Complex
pdb|2PJA|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
3-{[(R)-1-((S)-2-Benzyloxycarbonylamino-
3-Phenyl-Propionylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-2-(3-Guanidino-Phenyl)-Propionic Acid
Complex
pdb|2PJB|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
2-(3-aminomethyl-phenyl)-3-{[1-((s)-2-
Benzyloxycarbonylamino-3-phenyl-propane-1-
sulfonylamino)-2-
Methyl-propyl]-hydroxy-phosphinoyl}-propionic Acid
Complex
pdb|2PJB|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
2-(3-aminomethyl-phenyl)-3-{[1-((s)-2-
Benzyloxycarbonylamino-3-phenyl-propane-1-
sulfonylamino)-2-
Methyl-propyl]-hydroxy-phosphinoyl}-propionic Acid
Complex
pdb|2PJB|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
2-(3-aminomethyl-phenyl)-3-{[1-((s)-2-
Benzyloxycarbonylamino-3-phenyl-propane-1-
sulfonylamino)-2-
Methyl-propyl]-hydroxy-phosphinoyl}-propionic Acid
Complex
pdb|2PJC|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
({(R)-1-[(S)-2-Benzyloxycarbonylamino-3-
(4-Hydroxy-Phenyl)-Propionylamino]-2-Methyl-Propyl}-
Hydroxy-Phosphinoyloxy)-(3-Guanidino-Phenyl)-Acetic Acid
Complex
pdb|2PJC|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
({(R)-1-[(S)-2-Benzyloxycarbonylamino-3-
(4-Hydroxy-Phenyl)-Propionylamino]-2-Methyl-Propyl}-
Hydroxy-Phosphinoyloxy)-(3-Guanidino-Phenyl)-Acetic Acid
Complex
pdb|2PJC|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
({(R)-1-[(S)-2-Benzyloxycarbonylamino-3-
(4-Hydroxy-Phenyl)-Propionylamino]-2-Methyl-Propyl}-
Hydroxy-Phosphinoyloxy)-(3-Guanidino-Phenyl)-Acetic Acid
Complex
Length = 306
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 74/181 (40%), Gaps = 14/181 (7%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y +++ + + +NP + +IG + +++ L++ + G N KP
Sbjct: 9 YNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGK---PGPN--KPAIFMDC 63
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDG--YSAAKEGSC 166
H E + + + + ++ G + +T +N D +++P LN DG Y+ K
Sbjct: 64 GFHAREWISHAFCQWFVREAVLTYGYESHMTEFLNKLDFYVLPVLNIDGYIYTWTKNRMW 123
Query: 167 NSLASFVGRNNANGVDLNRNFPDQFDSSSERREQPLN------VKKLEPETLAMISFIKN 220
S G D NRNF D ++ P + + E ET A+ FI+N
Sbjct: 124 RKTRSTNAGTTCIGTDPNRNF-DAGWCTTGASTDPCDETYCGSAAESEKETKALADFIRN 182
Query: 221 N 221
N
Sbjct: 183 N 183
>pdb|3GLJ|A Chain A, A Polymorph Of Carboxypeptidase B Zymogen Structure
Length = 401
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 14/181 (7%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y +++ + + +NP + +IG + +++ L++ + G N KP
Sbjct: 104 YNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGK---PGPN--KPAIFMDC 158
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDG--YSAAKEGSC 166
H E + + + + ++ G + +T +N D +++P LN DG Y+ K
Sbjct: 159 GFHAREWISHAFCQWFVREAVLTYGYESHMTEFLNKLDFYVLPVLNIDGYIYTWTKNRMW 218
Query: 167 NSLASFVGRNNANGVDLNRNFPDQFDSSSERREQPLN------VKKLEPETLAMISFIKN 220
S G D NRNF + ++ + P + + E ET A+ FI+N
Sbjct: 219 RKTRSTNAGTTCIGTDPNRNFDAGWCTTGASTD-PCDETYCGSAAESEKETKALADFIRN 277
Query: 221 N 221
N
Sbjct: 278 N 278
>pdb|2PCU|A Chain A, Human Carboxypeptidase A4 In Complex With A Cleaved
Hexapeptide
Length = 305
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 10/147 (6%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y S + + + A P + IG S +NR ++ L+ S +G+ + +P A
Sbjct: 8 YHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFS----TGKGVRRPAVWLNA 63
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNS 168
IH E + + ++ + D +T ++ DIF++P NPDGY + + N
Sbjct: 64 GIHSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQ--TQNR 121
Query: 169 LASFVGRNNAN----GVDLNRNFPDQF 191
L N G D NRN+ F
Sbjct: 122 LWRKTRSRNPGSSCIGADPNRNWNASF 148
>pdb|4A94|A Chain A, Structure Of The Carboxypeptidase Inhibitor From Nerita
Versicolor In Complex With Human Cpa4
pdb|4A94|B Chain B, Structure Of The Carboxypeptidase Inhibitor From Nerita
Versicolor In Complex With Human Cpa4
Length = 310
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 10/147 (6%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y S + + + A P + IG S +NR ++ L+ S +G+ + +P A
Sbjct: 12 YHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFS----TGKGVRRPAVWLNA 67
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNS 168
IH E + + ++ + D +T ++ DIF++P NPDGY + + N
Sbjct: 68 GIHSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQ--TQNR 125
Query: 169 LASFVGRNNAN----GVDLNRNFPDQF 191
L N G D NRN+ F
Sbjct: 126 LWRKTRSRNPGSSCIGADPNRNWNASF 152
>pdb|2BO9|A Chain A, Human Carboxypeptidase A4 In Complex With Human Latexin.
pdb|2BO9|C Chain C, Human Carboxypeptidase A4 In Complex With Human Latexin
Length = 308
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 10/147 (6%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y S + + + A P + IG S +NR ++ L+ S +G+ + +P A
Sbjct: 10 YHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFS----TGKGVRRPAVWLNA 65
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNS 168
IH E + + ++ + D +T ++ DIF++P NPDGY + + N
Sbjct: 66 GIHSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQ--TQNR 123
Query: 169 LASFVGRNNAN----GVDLNRNFPDQF 191
L N G D NRN+ F
Sbjct: 124 LWRKTRSRNPGSSCIGADPNRNWNASF 150
>pdb|2BOA|A Chain A, Human Procarboxypeptidase A4.
pdb|2BOA|B Chain B, Human Procarboxypeptidase A4
Length = 404
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 10/147 (6%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y S + + + A P + IG S +NR ++ L+ S +G+ + +P A
Sbjct: 106 YHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFS----TGKGVRRPAVWLNA 161
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNS 168
IH E + + ++ + D +T ++ DIF++P NPDGY + + N
Sbjct: 162 GIHSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQ--TQNR 219
Query: 169 LASFVGRNNAN----GVDLNRNFPDQF 191
L N G D NRN+ F
Sbjct: 220 LWRKTRSRNPGSSCIGADPNRNWNASF 246
>pdb|1PYT|B Chain B, Ternary Complex Of Procarboxypeptidase A, Proproteinase E,
And Chymotrypsinogen C
pdb|3KGQ|A Chain A, Carboxypeptidase A Liganded To An Organic Small-Molecule:
Conformational Changes
Length = 309
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 16/182 (8%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y + DE+ F+ ++P V IG+S + R ++ L+ S G N +P
Sbjct: 12 YHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFS---TGGSN--RPAIWIDL 66
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNS 168
IH E + + + + G D T ++++ DIF+ NPDG+ A S N
Sbjct: 67 GIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGF--AFTHSQNR 124
Query: 169 LA----SFVGRNNANGVDLNRNFPDQF---DSSSERREQPLNVKKL--EPETLAMISFIK 219
L S + GVD NRN+ F +SS + + K E E +++ F+K
Sbjct: 125 LWRKTRSVTSSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANSEVEVKSIVDFVK 184
Query: 220 NN 221
++
Sbjct: 185 DH 186
>pdb|1HDQ|A Chain A, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With D-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|2CTB|A Chain A, The High Resolution Crystal Structure Of The Complex
Between Carboxypeptidase A And L-Phenyl Lactate
pdb|2CTC|A Chain A, The High Resolution Crystal Structure Of The Complex
Between Carboxypeptidase A And L-Phenyl Lactate
Length = 307
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 16/182 (8%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y + DE+ F+ ++P V IG+S + R ++ L+ S G N +P
Sbjct: 12 YHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFS---TGGSN--RPAIWIDL 66
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNS 168
IH E + + + + G D T ++++ DIF+ NPDG+ A S N
Sbjct: 67 GIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGF--AFTHSQNR 124
Query: 169 LA----SFVGRNNANGVDLNRNFPDQF---DSSSERREQPLNVKKL--EPETLAMISFIK 219
L S + GVD NRN+ F +SS + + K E E +++ F+K
Sbjct: 125 LWRKTRSVTSSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANSEVEVKSIVDFVK 184
Query: 220 NN 221
++
Sbjct: 185 DH 186
>pdb|1EE3|P Chain P, Cadmium-Substituted Bovine Pancreatic Carboxypeptidase A
(Alfa-Form) At Ph 7.5 And 2 Mm Chloride In Monoclinic
Crystal Form
pdb|1ELL|P Chain P, Cadmium-Substituted Bovine Pancreatic Carboxypeptidase A
(Alfa-Form) At Ph 7.5 And 0.25 M Chloride In Monoclinic
Crystal Form.
pdb|1ELM|P Chain P, Cadmium-Substituted Bovine Pacreatic Carboxypeptidase A
(Alfa-Form) At Ph 5.5 And 2 Mm Chloride In Monoclinic
Crystal Form.
pdb|1ZLH|A Chain A, Crystal Structure Of The Tick Carboxypeptidase Inhibitor
In Complex With Bovine Carboxypeptidase A
pdb|2ABZ|A Chain A, Crystal Structure Of C19aC43A MUTANT OF LEECH
Carboxypeptidase Inhibitor In Complex With Bovine
Carboxypeptidase A
pdb|2ABZ|B Chain B, Crystal Structure Of C19aC43A MUTANT OF LEECH
Carboxypeptidase Inhibitor In Complex With Bovine
Carboxypeptidase A
pdb|1ARM|A Chain A, Carboxypeptidase A With Zn Replaced By Hg
pdb|1YME|A Chain A, Structure Of Carboxypeptidase
pdb|3I1U|A Chain A, Carboxypeptidase A Inhibited By A Thiirane Mechanism-Based
Inactivator
pdb|3HLP|A Chain A, Carboxypeptidase A Liganded To An Organic Small-Molecule:
Conformational Changes
pdb|3HLP|B Chain B, Carboxypeptidase A Liganded To An Organic Small-Molecule:
Conformational Changes
pdb|3HUV|A Chain A, Carboxypeptidase A Liganded To An Organic Small-Molecule:
Conformational Changes
Length = 309
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 16/182 (8%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y + DE+ F+ ++P V IG+S + R ++ L+ S G N +P
Sbjct: 12 YHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFS---TGGSN--RPAIWIDL 66
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNS 168
IH E + + + + G D T ++++ DIF+ NPDG+ A S N
Sbjct: 67 GIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGF--AFTHSQNR 124
Query: 169 LA----SFVGRNNANGVDLNRNFPDQF---DSSSERREQPLNVKKL--EPETLAMISFIK 219
L S + GVD NRN+ F +SS + + K E E +++ F+K
Sbjct: 125 LWRKTRSVTSSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANSEVEVKSIVDFVK 184
Query: 220 NN 221
++
Sbjct: 185 DH 186
>pdb|1CPX|A Chain A, Beta Form Of Carboxypeptidase A (Residues 3-307) From
Bovine Pancreas In An Orthorhombic Crystal Form With Two
Zinc Ions In The Active Site.
pdb|1F57|A Chain A, Carboxypeptidase A Complex With D-Cysteine At 1.75 A
pdb|1M4L|A Chain A, Structure Of Native Carboxypeptidase A At 1.25 Resolution
pdb|1ARL|A Chain A, Carboxypeptidase A With Zn Removed
pdb|2RFH|A Chain A, Crystal Structure Analysis Of
Cpa-2-Benzyl-3-Nitropropanoic Acid Complex
Length = 307
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 16/182 (8%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y + DE+ F+ ++P V IG+S + R ++ L+ S G N +P
Sbjct: 12 YHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFS---TGGSN--RPAIWIDL 66
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNS 168
IH E + + + + G D T ++++ DIF+ NPDG+ A S N
Sbjct: 67 GIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGF--AFTHSQNR 124
Query: 169 LA----SFVGRNNANGVDLNRNFPDQF---DSSSERREQPLNVKKL--EPETLAMISFIK 219
L S + GVD NRN+ F +SS + + K E E +++ F+K
Sbjct: 125 LWRKTRSVTSSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANSEVEVKSIVDFVK 184
Query: 220 NN 221
++
Sbjct: 185 DH 186
>pdb|3FX6|A Chain A, X-Ray Crystallographic Studies On The Complex Of
Carboxypeptidase A With The Inhibitor Using Alpha-Nitro
Ketone As The Zinc-Binding Group
pdb|3FX6|C Chain C, X-Ray Crystallographic Studies On The Complex Of
Carboxypeptidase A With The Inhibitor Using Alpha-Nitro
Ketone As The Zinc-Binding Group
pdb|3FX6|E Chain E, X-Ray Crystallographic Studies On The Complex Of
Carboxypeptidase A With The Inhibitor Using Alpha-Nitro
Ketone As The Zinc-Binding Group
pdb|3FVL|A Chain A, Crystallogic Studies On The Complex Of Carboxypeptidase A
With Inhibitors Using Alpha-Hydroxy Ketone As
Zinc-Binding Group
pdb|3FVL|C Chain C, Crystallogic Studies On The Complex Of Carboxypeptidase A
With Inhibitors Using Alpha-Hydroxy Ketone As
Zinc-Binding Group
pdb|3FVL|E Chain E, Crystallogic Studies On The Complex Of Carboxypeptidase A
With Inhibitors Using Alpha-Hydroxy Ketone As
Zinc-Binding Group
Length = 307
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 16/182 (8%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y + DE+ F+ ++P V IG+S + R ++ L+ S G N +P
Sbjct: 12 YHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFS---TGGSN--RPAIWIDL 66
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNS 168
IH E + + + + G D T ++++ DIF+ NPDG+ A S N
Sbjct: 67 GIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGF--AFTHSQNR 124
Query: 169 LA----SFVGRNNANGVDLNRNFPDQF---DSSSERREQPLNVKKL--EPETLAMISFIK 219
L S + GVD NRN+ F +SS + + K E E +++ F+K
Sbjct: 125 LWRKTRSVTSSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANSEVEVKSIVDFVK 184
Query: 220 NN 221
++
Sbjct: 185 DH 186
>pdb|1BAV|A Chain A, Carboxypeptidase A Complexed With
2-Benzyl-3-Iodo-Propanoic Acid (Bip)
pdb|1BAV|B Chain B, Carboxypeptidase A Complexed With
2-Benzyl-3-Iodo-Propanoic Acid (Bip)
pdb|1BAV|C Chain C, Carboxypeptidase A Complexed With
2-Benzyl-3-Iodo-Propanoic Acid (Bip)
pdb|1BAV|D Chain D, Carboxypeptidase A Complexed With
2-Benzyl-3-Iodo-Propanoic Acid (Bip)
Length = 309
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 12/180 (6%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y + DE+ F+ Q+P V IG+S + R ++ L+ S G N +P
Sbjct: 12 YHTLDEIYDFMDLLVAQHPELVSKLQIGRSYEGRPIYVLKFS---TGGSN--RPAIWIDL 66
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGS--C 166
IH E + + + N G + T ++++ DIF+ NP+G++ +
Sbjct: 67 GIHSREWITQATGVWFAKKFTENYGQNPSFTAILDSMDIFLEIVTNPNGFAFTHSENRLW 126
Query: 167 NSLASFVGRNNANGVDLNRNFPDQF---DSSSERREQPLNVKKL--EPETLAMISFIKNN 221
S + GVD NRN+ F +SS + + K E E +++ F+KN+
Sbjct: 127 RKTRSVTSSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANSEVEVKSIVDFVKNH 186
>pdb|1HDU|A Chain A, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With Aminocarbonylphenylalanine At 1.75 A
pdb|1HDU|B Chain B, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With Aminocarbonylphenylalanine At 1.75 A
pdb|1HDU|D Chain D, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With Aminocarbonylphenylalanine At 1.75 A
pdb|1HDU|E Chain E, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With Aminocarbonylphenylalanine At 1.75 A
pdb|1HEE|A Chain A, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With L-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|1HEE|B Chain B, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With L-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|1HEE|D Chain D, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With L-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|1HEE|E Chain E, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With L-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|1IY7|A Chain A, Crystal Structure Of Cpa And Sulfamide-based Inhibitor
Complex
pdb|5CPA|A Chain A, Refined Crystal Structure Of Carboxypeptidase A At 1.54
Angstroms Resolution.
pdb|6CPA|A Chain A, Crystal Structure Of The Complex Of Carboxypeptidase A
With A Strongly Bound Phosphonate In A New Crystalline
Form: Comparison With Structures Of Other Complexes
pdb|7CPA|A Chain A, Comparison Of The Structures Of Three Carboxypeptidase A-
Phosphonate Complexes Determined By X-Ray
Crystallography
pdb|8CPA|A Chain A, Comparison Of The Structures Of Three Carboxypeptidase A-
Phosphonate Complexes Determined By X-Ray
Crystallography
pdb|3CPA|A Chain A, X-Ray Crystallographic Investigation Of Substrate Binding
To Carboxypeptidase A At Subzero Temperature
pdb|4CPA|A Chain A, Refined Crystal Structure Of The Potato Inhibitor Complex
Of Carboxypeptidase A At 2.5 Angstroms Resolution
pdb|4CPA|B Chain B, Refined Crystal Structure Of The Potato Inhibitor Complex
Of Carboxypeptidase A At 2.5 Angstroms Resolution
Length = 307
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 12/180 (6%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y + DE+ F+ Q+P V IG+S + R ++ L+ S G N +P
Sbjct: 12 YHTLDEIYDFMDLLVAQHPELVSKLQIGRSYEGRPIYVLKFS---TGGSN--RPAIWIDL 66
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGS--C 166
IH E + + + N G + T ++++ DIF+ NP+G++ +
Sbjct: 67 GIHSREWITQATGVWFAKKFTENYGQNPSFTAILDSMDIFLEIVTNPNGFAFTHSENRLW 126
Query: 167 NSLASFVGRNNANGVDLNRNFPDQF---DSSSERREQPLNVKKL--EPETLAMISFIKNN 221
S + GVD NRN+ F +SS + + K E E +++ F+KN+
Sbjct: 127 RKTRSVTSSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANSEVEVKSIVDFVKNH 186
>pdb|2V77|A Chain A, Crystal Structure Of Human Carboxypeptidase A1
pdb|2V77|B Chain B, Crystal Structure Of Human Carboxypeptidase A1
Length = 309
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 16/182 (8%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y + +E+ FL +NP V IG + + R ++ L+ S + +P
Sbjct: 12 YHTLEEIYDFLDLLVAENPHLVSKIQIGNTYEGRPIYVLKFSTGGSK-----RPAIWIDT 66
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNS 168
IH E V + + + + G D T +++T DIF+ NPDG+ A S N
Sbjct: 67 GIHSREWVTQASGVWFAKKITQDYGQDAAFTAILDTLDIFLEIVTNPDGF--AFTHSTNR 124
Query: 169 LASFVGRNNAN----GVDLNRNFPDQF---DSSSERREQPLNVK--KLEPETLAMISFIK 219
+ + A GVD NRN+ F +SS + + K E E +++ F+K
Sbjct: 125 MWRKTRSHTAGSLCIGVDPNRNWDAGFGLSGASSNPCSETYHGKFANSEVEVKSIVDFVK 184
Query: 220 NN 221
++
Sbjct: 185 DH 186
>pdb|3FJU|A Chain A, Ascaris Suum Carboxypeptidase Inhibitor In Complex With
Human Carboxypeptidase A1
Length = 307
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 16/182 (8%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y + +E+ FL +NP V IG + + R ++ L+ S + +P
Sbjct: 11 YHTLEEIYDFLDLLVAENPHLVSKIQIGNTYEGRPIYVLKFSTGGSK-----RPAIWIDT 65
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNS 168
IH E V + + + + G D T +++T DIF+ NPDG+ A S N
Sbjct: 66 GIHSREWVTQASGVWFAKKITQDYGQDAAFTAILDTLDIFLEIVTNPDGF--AFTHSTNR 123
Query: 169 LASFVGRNNAN----GVDLNRNFPDQF---DSSSERREQPLNVK--KLEPETLAMISFIK 219
+ + A GVD NRN+ F +SS + + K E E +++ F+K
Sbjct: 124 MWRKTRSHTAGSLCIGVDPNRNWDAGFGLSGASSNPCSETYHGKFANSEVEVKSIVDFVK 183
Query: 220 NN 221
++
Sbjct: 184 DH 185
>pdb|1NSA|A Chain A, Three-Dimensional Structure Of Porcine Procarboxypeptidase
B: A Structural Basis Of Its Inactivity
Length = 395
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 73/181 (40%), Gaps = 14/181 (7%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y +++ + + +NP + +IG + +++ L++ + G N KP
Sbjct: 98 YNNWETIEAWTEQVTSKNPDLISRSAIGTTFDGDNIYLLKVGK---PGSN--KPAIFMDC 152
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDG--YSAAKEGSC 166
H E + + + + G + +T ++ D +++P LN DG Y+ K
Sbjct: 153 GFHAREWISQAFCQWFVRDAVRTYGYEAHMTEFLDNLDFYVLPVLNIDGYIYTWTKNRMW 212
Query: 167 NSLASFVGRNNANGVDLNRNFPDQFDSSSERREQPLN------VKKLEPETLAMISFIKN 220
S ++ G D NRNF + + P N + E ET A+ FI+N
Sbjct: 213 RKTRSTNAGSSCTGTDPNRNFNAGW-CTVGASVNPCNETYCGSAAESEKETKALADFIRN 271
Query: 221 N 221
N
Sbjct: 272 N 272
>pdb|1CBX|A Chain A, Crystal Structure Of The Complex Between Carboxypeptidase
A And The Biproduct Analog Inhibitor L-Benzylsuccinate
At 2.0 Angstroms Resolution
pdb|1CPS|A Chain A, Structural Comparison Of Sulfodiimine And Sulfonamide
Inhibitors In Their Complexes With Zinc Enzymes
Length = 307
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 12/180 (6%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y + DE+ F+ ++P V IG+S + R ++ L+ S G N +P
Sbjct: 12 YHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFS---TGGSN--RPAIWIDL 66
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGS--C 166
IH E + + + N G + T ++++ DIF+ NP+G++ +
Sbjct: 67 GIHSREWITQATGVWFAKKFTENYGQNPSFTAILDSMDIFLEIVTNPNGFAFTHSENRLW 126
Query: 167 NSLASFVGRNNANGVDLNRNFPDQF---DSSSERREQPLNVKKL--EPETLAMISFIKNN 221
S + GVD NRN+ F +SS + + K E E +++ F+KN+
Sbjct: 127 RKTRSVTSSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANSEVEVKSIVDFVKNH 186
>pdb|1PCA|A Chain A, Three Dimensional Structure Of Porcine Pancreatic
Procarboxypeptidase A. A Comparison Of The A And B
Zymogens And Their Determinants For Inhibition And
Activation
Length = 403
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 18/183 (9%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y + +E+ F+ ++P+ V IG+S + R ++ L+ S G N +P +
Sbjct: 107 YHTLEEIYDFMDILVAEHPALVSKLQIGRSYEGRPIYVLKFS---TGGSN--RPAIWIDS 161
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNS 168
IH E + + + + N G + T ++++ DIF+ NP+G++ S N
Sbjct: 162 GIHSREWITQASGVWFAKKITENYGQNSSFTAILDSMDIFLEIVTNPNGFAFTH--SDNR 219
Query: 169 LASFVGRNNAN-----GVDLNRNFPDQF---DSSSERREQPLNVK--KLEPETLAMISFI 218
L R+ A+ G D NRN+ F +SS + + K E E ++ F+
Sbjct: 220 LWRKT-RSKASGSLCVGSDSNRNWDAGFGGAGASSSPCAETYHGKYPNSEVEVKSITDFV 278
Query: 219 KNN 221
KNN
Sbjct: 279 KNN 281
>pdb|3K2K|A Chain A, Crystal Structure Of Putative Carboxypeptidase
(Yp_103406.1) From Burkholderia Mallei Atcc 23344 At
2.49 A Resolution
Length = 403
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 23/173 (13%)
Query: 39 DPEPFLENPHYLSFD----ELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVA 94
D P ++ HY F+ E + A QQ P + + +G++V+ R + +
Sbjct: 117 DHTPEFDSIHYAYFEPYSEERHSEFLGAVQQXP-QASVVELGRTVEGRPXSLVVLGTPDE 175
Query: 95 SGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLI-INDGTDERVTR-LINTTDIFIIPS 152
+G K +A H E + L++ L+ D + + V R L + +I+P+
Sbjct: 176 AG--AAKKKVWIIARQHPGESXAEWFIEGLVKRLVGWGDWSGDPVARKLYDHATFYIVPN 233
Query: 153 LNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVK 205
NPDG + G+ R NA G +LNR + + +ER + L V+
Sbjct: 234 XNPDG---SVHGNL--------RTNAAGANLNREW---XEPDAERSPEVLVVR 272
>pdb|4AXV|A Chain A, Biochemical And Structural Characterization Of The Mpaa
Amidase As Part Of A Conserved Scavenging Pathway For
Peptidoglycan Derived Peptides In Gamma-Proteobacteria
Length = 243
Score = 34.3 bits (77), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 25/84 (29%)
Query: 149 IIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQ--------FDSSSERREQ 200
+I S NPD N L + R NAN VDLNR FP Q + SS +
Sbjct: 81 VILSXNPDA---------NQLGT---RANANQVDLNRAFPTQNWTEHGTVYRWSSHTPVR 128
Query: 201 PLNVK-----KLEPETLAMISFIK 219
+ VK +LEPE A+IS I+
Sbjct: 129 DVKVKTGDKEQLEPEVDALISLIE 152
>pdb|3L2N|A Chain A, Crystal Structure Of Putative Carboxypeptidase A
(yp_562911.1) From Shewanella Denitrificans Os-217 At
2.39 A Resolution
pdb|3L2N|B Chain B, Crystal Structure Of Putative Carboxypeptidase A
(yp_562911.1) From Shewanella Denitrificans Os-217 At
2.39 A Resolution
Length = 395
Score = 34.3 bits (77), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 59 LVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGY 118
L++A Q +P V +G ++ RD +++ + S +++ A H E
Sbjct: 139 LISAVQLHP-LVSTEHLGLTLDGRDXTLVKVGDDDPSKKSIW-----ITARQHPGETXAE 192
Query: 119 ELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNA 178
L+ L+ L+ ND + L++ + +I+P+ NPDG S+ + R NA
Sbjct: 193 WLVEGLLNQLLDNDCPTSKA--LLDKANFYIVPNXNPDG----------SVRGHL-RTNA 239
Query: 179 NGVDLNRNF 187
G +LNR +
Sbjct: 240 VGANLNREW 248
>pdb|2C1C|A Chain A, Structural Basis Of The Resistance Of An Insect
Carboxypeptidase To Plant Protease Inhibitors
pdb|2C1C|B Chain B, Structural Basis Of The Resistance Of An Insect
Carboxypeptidase To Plant Protease Inhibitors
Length = 312
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 57/146 (39%), Gaps = 15/146 (10%)
Query: 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 108
Y + + ++L ++ P + + +S + R + ++IS N KP+
Sbjct: 6 YQELEVIDEYLDYIGEKYPDVATVVNAAESFEGRPIKYIKISTTNFEDEN--KPVIFIDG 63
Query: 109 NIHGDEVVGYELMNYLIEYLIINDGTDERVTR--LINTTDIFIIPSLNPDGYSAAKEGSC 166
IH E + + + I L+ E VT L+ D ++P +NPDGY
Sbjct: 64 GIHAREWISPPSVTWAIHKLV------EDVTENDLLEKFDWILLPVVNPDGYKYTFTNER 117
Query: 167 NSLASFVGRNN-----ANGVDLNRNF 187
+ NN G D NRNF
Sbjct: 118 FWRKTRSTNNNPLSQICRGADGNRNF 143
>pdb|1CPB|B Chain B, Structure Of Carboxypeptidase B At 2.8 Angstroms
Resolution
Length = 217
Score = 30.4 bits (67), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Query: 137 RVTRLINTTDIFIIPSLNPDG--YSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSS 194
+T ++ D +++P +N DG Y+ S ++ G DLNRNF D S
Sbjct: 3 HMTEFLDKLDFYVLPVVNIDGYIYTWTTNRMWRKTRSTRAGSSCTGTDLNRNF-DAGWCS 61
Query: 195 SERREQPL------NVKKLEPETLAMISFIKNN 221
P + + E E+ A+ FI+N+
Sbjct: 62 IGASNNPCSETYCGSAAESEKESKAVADFIRNH 94
>pdb|1RM6|A Chain A, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1RM6|D Chain D, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1SB3|A Chain A, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1SB3|D Chain D, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
Length = 769
Score = 30.0 bits (66), Expect = 1.2, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 135 DERVTRLINTTDI--FIIPSLNPDGYSAAKEGSCNSLASFV 173
D RV ++ + DI I+ S++P+G AKE S LA F+
Sbjct: 693 DYRVPTIVESPDIEVIIVESMDPNGPFGAKEASEGMLAGFL 733
>pdb|3L7Y|A Chain A, The Crystal Structure Of Smu.1108c From Streptococcus
Mutans Ua159
Length = 304
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 136 ERVTRLINTTDI-FIIPSLNPDGYSAAKEG--SCNSLASFVGRNNANGVDLNRNFPDQFD 192
+R+ + + DI F++ S NP Y +E C+ +FVG N AN + N++ + F
Sbjct: 61 QRILKQLQERDIRFVVASSNP--YRQLREHFPDCHEQLTFVGENGANIISKNQSLIEVFQ 118
Query: 193 SSSE 196
+
Sbjct: 119 QRED 122
>pdb|2V17|L Chain L, Structure Of The Complex Of Antibody Mn423 With A Fragment
Of Tau Protein
pdb|3L1O|L Chain L, Crystal Structure Of Monoclonal Antibody Mn423 Fab
Fragment With Free Combining Site, Crystallized In The
Presence Of Zinc
Length = 214
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 179 NGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLS 226
+G L P +F S + L + +LEPE AM ++N + L+
Sbjct: 50 SGSTLQSGTPSRFSGSGSGTDFTLTISRLEPEDFAMYYCQQHNDYPLT 97
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,590,597
Number of Sequences: 62578
Number of extensions: 314819
Number of successful extensions: 837
Number of sequences better than 100.0: 54
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 777
Number of HSP's gapped (non-prelim): 56
length of query: 241
length of database: 14,973,337
effective HSP length: 96
effective length of query: 145
effective length of database: 8,965,849
effective search space: 1300048105
effective search space used: 1300048105
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)