Query psy17405
Match_columns 241
No_of_seqs 134 out of 1238
Neff 7.9
Searched_HMMs 46136
Date Fri Aug 16 21:40:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17405.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/17405hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd06247 M14_CPO Peptidase M14 100.0 1.2E-49 2.6E-54 349.1 21.7 190 46-240 1-199 (298)
2 cd03870 M14_CPA Peptidase M14 100.0 1.2E-49 2.5E-54 350.0 21.2 190 45-240 2-199 (301)
3 cd03872 M14_CPA6 Carboxypeptid 100.0 1.6E-49 3.4E-54 348.3 20.8 188 48-240 1-197 (300)
4 KOG2650|consensus 100.0 1.1E-49 2.4E-54 359.5 18.9 193 43-240 115-318 (418)
5 cd06246 M14_CPB2 Peptidase M14 100.0 3.2E-49 7E-54 347.2 21.4 190 46-240 2-200 (300)
6 cd03871 M14_CPB Peptidase M14 100.0 3.1E-49 6.7E-54 346.9 20.8 190 45-240 2-200 (300)
7 cd06248 M14_CPA_CPB_like Pepti 100.0 3.2E-48 6.9E-53 342.0 20.6 192 46-240 1-203 (304)
8 cd03869 M14_CPX_like Peptidase 100.0 6.8E-48 1.5E-52 348.2 21.7 192 47-240 3-213 (405)
9 cd03859 M14_CPT Peptidase M14- 100.0 8.5E-48 1.8E-52 338.4 21.6 191 47-240 2-206 (295)
10 cd03868 M14_CPD_I The first ca 100.0 5.1E-47 1.1E-51 343.2 20.8 183 49-240 1-183 (372)
11 cd03863 M14_CPD_II The second 100.0 5.5E-47 1.2E-51 341.4 20.3 180 47-240 4-183 (375)
12 cd06245 M14_CPD_III The third 100.0 1.4E-46 3.1E-51 337.9 20.9 179 48-240 1-179 (363)
13 cd06905 Peptidase_M14-like_8 A 100.0 5.1E-46 1.1E-50 333.0 21.9 192 46-240 1-268 (360)
14 cd03867 M14_CPZ Peptidase M14- 100.0 3.2E-46 6.9E-51 339.6 20.7 190 49-240 1-203 (395)
15 cd03864 M14_CPN Peptidase M14 100.0 4.5E-46 9.8E-51 337.0 20.7 190 49-240 1-201 (392)
16 smart00631 Zn_pept Zn_pept. 100.0 9.1E-46 2E-50 323.1 21.8 187 49-240 1-190 (277)
17 cd03858 M14_CP_N-E_like Carbox 100.0 1.3E-45 2.9E-50 334.4 20.6 183 49-240 1-184 (374)
18 cd06227 Peptidase_M14-like_2 A 100.0 2.7E-45 5.8E-50 318.0 20.6 182 49-240 2-191 (272)
19 cd03866 M14_CPM Peptidase M14 100.0 1.8E-45 3.9E-50 332.4 20.2 179 47-240 3-181 (376)
20 cd03860 M14_CP_A-B_like The Pe 100.0 3.2E-45 6.9E-50 322.1 21.2 185 49-240 1-194 (294)
21 cd03865 M14_CPE_H Peptidase M1 100.0 3.4E-45 7.4E-50 330.7 20.3 192 47-240 3-209 (402)
22 cd06226 M14_CPT_like Peptidase 100.0 4.9E-43 1.1E-47 306.6 19.4 173 66-240 1-207 (293)
23 PF00246 Peptidase_M14: Zinc c 100.0 1.5E-42 3.3E-47 302.8 17.8 180 55-240 1-185 (279)
24 cd06228 Peptidase_M14-like_3 A 100.0 1.5E-40 3.2E-45 293.6 15.8 161 74-240 5-198 (332)
25 cd06229 M14_Endopeptidase_I Pe 100.0 1.2E-38 2.6E-43 275.1 15.1 154 78-240 1-179 (255)
26 cd06242 Peptidase_M14-like_1_5 100.0 5.7E-38 1.2E-42 271.9 18.4 155 49-235 2-156 (268)
27 KOG2649|consensus 100.0 9.5E-38 2.1E-42 280.6 17.4 191 45-240 65-265 (500)
28 cd06237 M14_Nna1_like_3 A bact 100.0 1.6E-37 3.5E-42 265.6 17.7 156 46-240 4-164 (244)
29 cd06234 M14_Nna1_like_1 A bact 100.0 4E-37 8.6E-42 265.2 18.0 161 42-235 3-163 (263)
30 cd06908 M14_AGBL4_like Peptida 100.0 7.4E-37 1.6E-41 263.1 17.0 155 59-240 1-161 (261)
31 cd06241 Peptidase_M14-like_1_4 100.0 1.9E-34 4E-39 249.7 16.4 157 57-235 1-164 (266)
32 cd06239 Peptidase_M14-like_1_2 100.0 8.2E-34 1.8E-38 240.4 16.5 136 62-235 2-137 (231)
33 cd03856 M14_Nna1_like Peptidas 100.0 6.2E-34 1.3E-38 246.9 15.7 152 47-234 8-164 (269)
34 cd06235 M14_Nna1_like_2 Subgro 100.0 2.5E-33 5.3E-38 242.0 16.2 148 66-240 9-161 (258)
35 cd03862 Peptidase_M14-like_7 A 100.0 3.6E-33 7.7E-38 242.0 16.3 144 80-240 8-169 (273)
36 cd06243 Peptidase_M14-like_1_6 100.0 4.6E-33 1E-37 236.6 15.2 128 75-232 1-130 (236)
37 cd06238 Peptidase_M14-like_1_1 100.0 9.9E-33 2.1E-37 239.0 12.9 141 75-233 1-177 (271)
38 cd06236 M14_AGBL5_like Peptida 100.0 2.3E-31 5.1E-36 232.4 15.9 146 69-240 15-184 (304)
39 cd06244 Peptidase_M14-like_1_7 100.0 2.1E-31 4.5E-36 228.5 14.3 133 75-235 1-172 (268)
40 cd03857 Peptidase_M14-like_1 P 100.0 3.3E-31 7.2E-36 224.9 15.3 127 75-232 1-131 (226)
41 cd06907 M14_AGBL2-3_like Pepti 100.0 1.7E-30 3.7E-35 222.6 15.4 147 67-240 11-162 (261)
42 PRK10602 murein peptide amidas 100.0 5.6E-31 1.2E-35 223.5 11.8 133 70-233 15-160 (237)
43 cd06240 Peptidase_M14-like_1_3 100.0 6.6E-30 1.4E-34 221.0 13.9 147 71-235 1-181 (273)
44 cd06904 M14_MpaA_like Peptidas 100.0 4.8E-28 1E-32 198.5 11.9 111 104-235 1-113 (178)
45 cd06906 M14_Nna1 Peptidase M14 99.9 8.7E-27 1.9E-31 200.6 15.2 154 59-239 4-168 (278)
46 cd06231 Peptidase_M14-like_4 A 99.9 2.9E-26 6.3E-31 195.2 14.5 125 69-234 14-141 (236)
47 cd00596 Peptidase_M14_like The 99.9 1.3E-26 2.7E-31 192.4 10.9 112 104-240 1-112 (196)
48 cd06232 Peptidase_M14-like_5 P 99.9 1.9E-25 4.1E-30 186.5 13.4 138 50-232 2-143 (240)
49 cd06233 Peptidase_M14-like_6 P 99.8 2.6E-17 5.7E-22 143.0 15.2 160 50-235 3-220 (283)
50 KOG3641|consensus 99.7 6.9E-17 1.5E-21 148.0 11.1 166 42-238 372-545 (650)
51 cd06251 M14_ASTE_ASPA_like_1 A 99.6 3.9E-15 8.4E-20 130.8 10.2 109 84-234 9-119 (287)
52 cd06250 M14_PaAOTO_like An unc 99.6 6.5E-15 1.4E-19 132.9 11.7 99 74-190 4-105 (359)
53 cd06255 M14_ASTE_ASPA_like_5 A 99.6 9.8E-15 2.1E-19 128.5 11.4 120 76-235 3-125 (293)
54 cd06254 M14_ASTE_ASPA_like_4 A 99.6 8.1E-15 1.8E-19 128.8 9.8 111 82-235 4-119 (288)
55 cd06230 M14_ASTE_ASPA_like The 99.5 1.5E-14 3.3E-19 124.7 8.8 95 104-234 1-97 (252)
56 cd06252 M14_ASTE_ASPA_like_2 A 99.5 3E-14 6.5E-19 126.7 10.2 112 81-236 21-136 (316)
57 PF10994 DUF2817: Protein of u 99.5 3.6E-13 7.7E-18 120.2 15.6 160 50-235 3-221 (341)
58 TIGR02994 ectoine_eutE ectoine 99.5 1.3E-13 2.8E-18 122.9 10.7 113 83-239 36-152 (325)
59 COG2866 Predicted carboxypepti 99.5 1.3E-13 2.7E-18 124.9 8.5 101 69-189 120-222 (374)
60 cd06253 M14_ASTE_ASPA_like_3 A 99.5 3.4E-13 7.3E-18 119.0 11.0 115 82-235 8-125 (298)
61 PF04952 AstE_AspA: Succinylgl 99.4 1.3E-13 2.7E-18 121.1 5.7 107 102-236 3-113 (292)
62 COG3608 Predicted deacylase [G 99.4 3.6E-12 7.8E-17 112.3 10.1 108 84-235 38-149 (331)
63 PRK02259 aspartoacylase; Provi 99.3 1.8E-11 3.8E-16 107.6 8.2 100 102-234 3-108 (288)
64 cd06909 M14_ASPA Aspartoacylas 99.2 2.4E-11 5.3E-16 106.3 8.4 99 102-233 1-105 (282)
65 cd06256 M14_ASTE_ASPA_like_6 A 99.2 4E-11 8.6E-16 107.0 9.3 97 102-233 35-131 (327)
66 cd06910 M14_ASTE_ASPA_like_7 A 99.2 9E-11 2E-15 102.4 7.8 100 102-235 1-106 (272)
67 cd03855 M14_ASTE Peptidase M14 99.1 4.1E-10 8.9E-15 100.5 11.1 99 100-232 41-149 (322)
68 PRK05324 succinylglutamate des 99.1 4.7E-10 1E-14 100.3 10.6 99 100-232 46-153 (329)
69 TIGR03242 arg_catab_astE succi 99.1 6.6E-10 1.4E-14 99.0 9.6 98 101-232 41-148 (319)
70 COG2988 Succinylglutamate desu 98.1 6.9E-06 1.5E-10 71.0 6.3 103 103-234 45-150 (324)
71 PF09892 DUF2119: Uncharacteri 97.5 0.00035 7.7E-09 56.9 6.5 83 102-235 7-89 (193)
72 COG4073 Uncharacterized protei 96.9 0.0026 5.6E-08 50.9 5.6 81 102-234 14-95 (198)
73 KOG3641|consensus 64.0 4 8.6E-05 39.1 1.6 121 46-187 49-190 (650)
74 COG1029 FwdB Formylmethanofura 50.6 40 0.00086 30.9 5.5 45 137-190 272-319 (429)
75 COG3741 HutG N-formylglutamate 50.0 40 0.00087 29.3 5.3 11 221-231 144-154 (272)
76 KOG3374|consensus 49.8 98 0.0021 25.4 7.1 57 46-107 38-97 (210)
77 KOG1350|consensus 45.3 10 0.00022 34.2 0.9 64 55-120 208-272 (521)
78 COG0055 AtpD F0F1-type ATP syn 32.8 49 0.0011 30.6 3.3 58 55-120 164-222 (468)
79 PF05127 Helicase_RecD: Helica 30.1 58 0.0013 26.6 3.1 31 100-130 113-143 (177)
80 KOG2501|consensus 28.2 2E+02 0.0044 23.0 5.8 67 54-161 54-130 (157)
81 KOG4088|consensus 27.8 20 0.00043 28.2 -0.0 24 103-126 124-147 (167)
82 TIGR02867 spore_II_P stage II 27.4 3.4E+02 0.0074 22.5 7.3 73 48-130 62-134 (196)
83 PF07454 SpoIIP: Stage II spor 27.4 2.9E+02 0.0062 24.1 7.1 79 47-131 138-217 (268)
84 PF13174 TPR_6: Tetratricopept 27.4 85 0.0018 16.7 2.7 18 51-68 15-32 (33)
85 PF11943 DUF3460: Protein of u 25.5 58 0.0013 21.7 1.9 18 53-70 5-22 (60)
86 TIGR02722 lp_ uncharacterized 25.3 2.7E+02 0.0058 22.7 6.3 15 19-33 7-21 (189)
87 PF06925 MGDG_synth: Monogalac 24.7 71 0.0015 25.2 2.7 25 208-232 75-99 (169)
88 PF15240 Pro-rich: Proline-ric 22.8 81 0.0018 25.8 2.6 25 16-40 3-27 (179)
89 PRK10319 N-acetylmuramoyl-l-al 20.6 3.4E+02 0.0073 23.9 6.3 22 212-233 115-136 (287)
No 1
>cd06247 M14_CPO Peptidase M14 carboxypeptidase (CP) O (CPO, also known as metallocarboxypeptidase C; EC 3.4.17.) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPO has not been well characterized as yet, and little is known about it. Based on modeling studies, CPO has been suggested to have specificity for acidic residues rather than aliphatic/aromatic residues as in A-like enzymes or basic residues as in B-like enzymes. It remains to be demonstrated that CPO is functional as an MCP.
Probab=100.00 E-value=1.2e-49 Score=349.05 Aligned_cols=190 Identities=22% Similarity=0.290 Sum_probs=173.4
Q ss_pred CCCCCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHH
Q psy17405 46 NPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLI 125 (241)
Q Consensus 46 ~~~y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~ 125 (241)
+.+|++|+||.++|++|+++||+++++.+||+|+|||+|++++|+++. ...||+|+|+||+||+||+|++++++++
T Consensus 1 ~~~Y~~~~ei~~~l~~L~~~~p~~v~l~~iG~S~EgR~I~~l~i~~~~----~~~k~~i~i~~giHarEwi~~~~~l~~i 76 (298)
T cd06247 1 YTKYHPMDEIYNWMDQIKEKYSELVSQHYLGCTYELRPMYYLKIGWPS----DKPKKIIWMDCGIHAREWISPAFCQWFV 76 (298)
T ss_pred CCCcCCHHHHHHHHHHHHHHCCCcEEEEeceECcCCceEEEEEeecCC----CCCCcEEEEeccccccccccHHHHHHHH
Confidence 468999999999999999999999999999999999999999999643 2458999999999999999999999999
Q ss_pred HHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCC--CCCCCccCCCCCCCCCCCCCC-----CCC
Q psy17405 126 EYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVG--RNNANGVDLNRNFPDQFDSSS-----ERR 198 (241)
Q Consensus 126 ~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~--r~n~~GvDlNRnf~~~w~~~~-----~~~ 198 (241)
++|++++..|+.++++|++++|+|||++||||++++++.++.|++++.. +.+|.||||||||++.|+..+ |..
T Consensus 77 ~~Ll~~y~~d~~~~~ll~~~~i~ivP~~NPDGy~ys~~~~r~wRknr~~~~~~~c~GVDLNRNf~~~w~~~g~s~~p~~~ 156 (298)
T cd06247 77 KEILQNYKTDPILRKVLKNVDFYVLPVLNIDGYIYTWTTDRLWRKNRSPHNNGTCYGVDLNRNFNSQWCSIGASRNCRSN 156 (298)
T ss_pred HHHHHHhccCHHHHHHHhcCeEEEEeeecCCcceEEecccceecccCCCCCCCCccccccccCCCCccccCCCCCCCCCC
Confidence 9999998889999999999999999999999999999999888876543 468999999999999997642 457
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhCCCeE--EEEecCCCcceeccC
Q psy17405 199 EQPLNVKKLEPETLAMISFIKNNPFVL--SGNLHGKKPNKVKFP 240 (241)
Q Consensus 199 ~~~~~~~~sepEt~al~~~~~~~~~~~--~idlH~g~~~~~~yp 240 (241)
.|+|+.|+|||||+||+++++++++++ ++|+|+++.. ++||
T Consensus 157 ~y~G~~pfSEpEt~ai~~~~~~~~~~i~~~l~~Hsyg~~-i~~P 199 (298)
T cd06247 157 IFCGTGPESEPETKAVARLIESKKSDILCYLTIHSYGQL-ILLP 199 (298)
T ss_pred CcCCCCCCCcHHHHHHHHHHHhcCcceEEEEEeccCCCe-EEeC
Confidence 899999999999999999999997665 9999999977 9998
No 2
>cd03870 M14_CPA Peptidase M14 Carboxypeptidase (CP) A (CPA) belongs to the A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA enzymes generally favor hydrophobic residues. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase A (PCPA) is produced by the exocrine pancreas and stored as a stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. This subfamily includes CPA1, CPA2 and CPA4 forms. Within these A forms, there are slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 p
Probab=100.00 E-value=1.2e-49 Score=349.97 Aligned_cols=190 Identities=22% Similarity=0.318 Sum_probs=174.6
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHH
Q psy17405 45 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYL 124 (241)
Q Consensus 45 ~~~~y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l 124 (241)
.+.+|++|+|+.++|++|+++||+++++.+||+|+|||+|++++|+++.. .||+|+|+||+||+||+|+++++++
T Consensus 2 ~~~~Y~~~~ei~~~l~~L~~~~p~~v~~~~iG~S~eGR~I~~l~is~~~~-----~kp~v~i~~giHarE~i~~~~~l~~ 76 (301)
T cd03870 2 NYATYHTLDEIYDFMDLLVAEHPNLVSKLQIGRSYEGRPIYVLKFSTGGS-----NRPAIWIDAGIHSREWITQATGVWF 76 (301)
T ss_pred CccccCCHHHHHHHHHHHHHHCCCceEEEecccCCCCCeEEEEEEecCCC-----CCceEEEeccccccchhhHHHHHHH
Confidence 47789999999999999999999999999999999999999999997542 6899999999999999999999999
Q ss_pred HHHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCC--CCCCCCccCCCCCCCCCCCCC-----CCC
Q psy17405 125 IEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFV--GRNNANGVDLNRNFPDQFDSS-----SER 197 (241)
Q Consensus 125 ~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~--~r~n~~GvDlNRnf~~~w~~~-----~~~ 197 (241)
+++|+.+++.|+.++++|++++|+|||++||||++++++.++.|++++. ...+|.||||||||+..|+.. .|.
T Consensus 77 ~~~L~~~~~~d~~~~~lLd~~~i~ivP~~NPDG~~~s~~~~r~wrknr~~~~~~~~~GVDLNRNf~~~w~~~g~s~~p~~ 156 (301)
T cd03870 77 AKKITEDYGQDPSFTAILDSMDIFLEIVTNPDGYVFTHSQNRLWRKTRSVTSGSLCVGVDPNRNWDAGFGGAGASSNPCS 156 (301)
T ss_pred HHHHHHhcccCHHHHHHHHhCcEEEEeeecCchhhheecccceeecCCCCCCCCCccccccccCCCcccCcCCCCCCCCc
Confidence 9999999888899999999999999999999999999888888877553 467899999999999999854 245
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHhC-CCeEEEEecCCCcceeccC
Q psy17405 198 REQPLNVKKLEPETLAMISFIKNN-PFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 198 ~~~~~~~~~sepEt~al~~~~~~~-~~~~~idlH~g~~~~~~yp 240 (241)
..|+|+.|+|||||+||++++.+. ++.+++|+|+++.. ++||
T Consensus 157 ~~Y~G~~pfSEpEt~av~~~~~~~~~~~~~l~lHS~g~~-i~yP 199 (301)
T cd03870 157 ETYHGPYANSEVEVKSIVDFVKSHGNFKAFISIHSYSQL-LLYP 199 (301)
T ss_pred cccCCCCCCccHHHHHHHHHHhhCCCeEEEEEeccCCce-EEec
Confidence 679999999999999999999987 68999999999987 8898
No 3
>cd03872 M14_CPA6 Carboxypeptidase (CP) A6 (CPA6, also known as CPAH; EC 3.4.17.1), belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA6 prefers large hydrophobic C-terminal amino acids as well as histidine, while peptides with a penultimate glycine or proline are very poorly cleaved. Several neuropeptides are processed by CPA6, including Met- and Leu-enkephalin, angiotensin I, and neurotensin. CPA6 converts enkephalin and neurotensin into forms known to be inactive toward their receptors, but converts inactive angiotensin I into the biologically active angiotensin II. Thus, CPA6 plays a possible role in the regulation of neuropeptides in the extracellular environment within the olfactory bulb where it is highly expresse
Probab=100.00 E-value=1.6e-49 Score=348.30 Aligned_cols=188 Identities=21% Similarity=0.327 Sum_probs=172.7
Q ss_pred CCCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHH
Q psy17405 48 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEY 127 (241)
Q Consensus 48 ~y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~ 127 (241)
.|++|+||.++|++|+++||+++++.+||+|+|||+|++++|+++.. ..||.|+|.||+||+||+|++++++++++
T Consensus 1 ~Y~~~~ei~~~l~~L~~~~p~~v~l~~iG~S~EGR~i~~l~i~~~~~----~~k~~i~i~~giHarEwi~~~~~~~~i~~ 76 (300)
T cd03872 1 VYHPLEEIESWMFYMNKTHSDLVHLFSIGKSYEGRSLYVLKLGKRTR----SYKKAVWIDCGIHAREWIGPAFCQWFVKE 76 (300)
T ss_pred CCCCHHHHHHHHHHHHHHCCCceEEEEeeecCCCCceEEEEEecCCC----CCCCeEEEecccccccccCHHHHHHHHHH
Confidence 38999999999999999999999999999999999999999996432 46899999999999999999999999999
Q ss_pred HHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCC--CCCCCCccCCCCCCCCCCCCCC-----CCCCC
Q psy17405 128 LIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFV--GRNNANGVDLNRNFPDQFDSSS-----ERREQ 200 (241)
Q Consensus 128 L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~--~r~n~~GvDlNRnf~~~w~~~~-----~~~~~ 200 (241)
|+.+++.|+.++++|++++|+|||++||||+++++++++.|++++. .+.+|.||||||||++.|+..+ |...|
T Consensus 77 Ll~~~~~d~~~~~lL~~~~~~ivP~vNPDGy~ys~~~~r~wrknR~~~~~~~c~GVDLNRNf~~~w~~~g~s~~Pcs~~Y 156 (300)
T cd03872 77 ALNSYQTDPAMKKMLNQLYFYVMPVFNVDGYHYSWTNDRFWRKTRSKNSRYQCRGVDANRNWKVKWCDEGASLHPCDDTY 156 (300)
T ss_pred HHHhccCChHHHHHHhhCeEEEEeeecCCcceeeeccchhhhccCCCCCCCCccccccccccCcccCCCCCCCCCCCCCC
Confidence 9999888999999999999999999999999999999988877644 4678999999999999997653 45789
Q ss_pred CCCCCCCcHHHHHHHHHHHhC--CCeEEEEecCCCcceeccC
Q psy17405 201 PLNVKKLEPETLAMISFIKNN--PFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 201 ~~~~~~sepEt~al~~~~~~~--~~~~~idlH~g~~~~~~yp 240 (241)
.|+.|+|||||+||++++.++ .+.+++|+|+++.. ++||
T Consensus 157 ~G~~pfSEpEt~al~~~~~~~~~~i~~~ls~Hsyg~~-i~~P 197 (300)
T cd03872 157 CGPFPESEPEVKAVAQFLRKHRKHVRAYLSFHAYAQM-LLYP 197 (300)
T ss_pred CCCCCCCcHHHHHHHHHHHhCCccceEEEEEccCCcE-EEec
Confidence 999999999999999999997 47779999999988 8898
No 4
>KOG2650|consensus
Probab=100.00 E-value=1.1e-49 Score=359.47 Aligned_cols=193 Identities=28% Similarity=0.346 Sum_probs=178.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHH
Q psy17405 43 FLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMN 122 (241)
Q Consensus 43 ~~~~~~y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~ 122 (241)
.+.+..|++++||.+||++|+.+||++|++..||+|+|||+|.+++|+.+. ..+||+|||.||+||+||+++.+++
T Consensus 115 ~~~~~~Y~~le~I~~~l~~l~~~~P~~v~~~~IG~s~EgR~i~~lkIs~~~----~~~k~~I~id~GiHAREWIspAta~ 190 (418)
T KOG2650|consen 115 DFNWERYHSLEEIYEWLDNLAERYPDLVSLIHIGRSYEGRPLKVLKISGGD----NRNKKAIFIDAGIHAREWISPATAL 190 (418)
T ss_pred cccHHHhcCHHHHHHHHHHHHHhCCCceEEEEcccccCCceEEEEEecCCC----CCCCceEEEecchhHHhhccHHHHH
Confidence 357889999999999999999999999999999999999999999999752 2468999999999999999999999
Q ss_pred HHHHHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCC---CCCccCCCCCCCCCCCCC-----
Q psy17405 123 YLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRN---NANGVDLNRNFPDQFDSS----- 194 (241)
Q Consensus 123 ~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~---n~~GvDlNRnf~~~w~~~----- 194 (241)
+++++|+..|+.|+.++++|++++|+|+|++|||||+|+++.+|.|+|++.... .|.||||||||+..|++.
T Consensus 191 ~~i~qLv~~y~~~~~~~~ll~~~dwyI~Pv~NPDGYeYS~t~~R~WRKnRs~~~~~~~C~GvDlNRNfd~~W~~~~Gas~ 270 (418)
T KOG2650|consen 191 WFINQLVSSYGRDPAVTKLLDKLDWYILPVVNPDGYEYSRTTDRLWRKNRSPNGCASRCIGVDLNRNFDFHWGGGKGASS 270 (418)
T ss_pred HHHHHHHhhhccCHHHHHHHhcCcEEEEeeecCCcceeeecccccccccCCCCCCCCeeeCCCCCCCccCcCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999988765433 599999999999999883
Q ss_pred -CCCCCCCCCCCCCcHHHHHHHHHHHhC--CCeEEEEecCCCcceeccC
Q psy17405 195 -SERREQPLNVKKLEPETLAMISFIKNN--PFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 195 -~~~~~~~~~~~~sepEt~al~~~~~~~--~~~~~idlH~g~~~~~~yp 240 (241)
.|+..|.|+.|||||||++|.+|+.+. ++.++|+|||+++. ++||
T Consensus 271 ~PCse~Y~G~~pfSEpEt~av~~fi~~~~~~i~~yislHSYsQ~-llyP 318 (418)
T KOG2650|consen 271 DPCSETYAGPSPFSEPETRAVRDFITSFENNIKAYISLHSYSQL-LLYP 318 (418)
T ss_pred CCCccccCCCCCCCcHHHHHHHHHHHhcCcceEEEEEeccccee-EEec
Confidence 266889999999999999999999996 46999999999977 9999
No 5
>cd06246 M14_CPB2 Peptidase M14 Carboxypeptidase (CP) B2 (CPB2, also known as plasma carboxypeptidase B, carboxypeptidase U, and CPU), belongs to the carboxpeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPB2 enzyme displays B-like activity; it only cleaves the basic residues lysine or arginine. It is produced and secreted by the liver as the inactive precursor, procarboxypeptidase U or PCPB2, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). It circulates in plasma as a zymogen bound to plasminogen, and the active enzyme, TAFIa, inhibits fibrinolysis. It is highly regulated, increased TAFI concentrations are thought to increase the risk of thrombosis and coronary artery disease by reducing fibrinolytic activity whil
Probab=100.00 E-value=3.2e-49 Score=347.20 Aligned_cols=190 Identities=22% Similarity=0.307 Sum_probs=173.3
Q ss_pred CCCCCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHH
Q psy17405 46 NPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLI 125 (241)
Q Consensus 46 ~~~y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~ 125 (241)
+.+|++|+|+.++|++|+++||+++++.+||+|+|||+|++++|++.. ...||+|+|+||+||+||+|++++++++
T Consensus 2 ~~~Y~~~~ei~~~l~~l~~~~p~~v~~~~iG~S~egR~I~~l~is~~~----~~~k~~v~i~~giHarE~i~~~~~l~~i 77 (300)
T cd06246 2 YEQYHSLNEIYSWIEFITERHSDMLEKIHIGSSFEKRPLYVLKVSGKE----QTAKNAIWIDCGIHAREWISPAFCLWFV 77 (300)
T ss_pred CCccCCHHHHHHHHHHHHHHCCCcEEEEecccCCCCCeEEEEEEeCCC----CCCCCeEEEecccCccchhhHHHHHHHH
Confidence 468999999999999999999999999999999999999999999642 2468999999999999999999999999
Q ss_pred HHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCC--CCCCCCccCCCCCCCCCCCCCC-----CCC
Q psy17405 126 EYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFV--GRNNANGVDLNRNFPDQFDSSS-----ERR 198 (241)
Q Consensus 126 ~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~--~r~n~~GvDlNRnf~~~w~~~~-----~~~ 198 (241)
++|++.++.|+.++++|++++|+|||++||||+++++++++.|++++. ...+|.|||||||||+.|+..+ |..
T Consensus 78 ~~Ll~~~~~d~~~~~lL~~~~i~ivP~~NPDG~~~~~~~~r~wRknr~~~~~~~~~GVDLNRNf~~~w~~~g~s~~p~~~ 157 (300)
T cd06246 78 GHATQFYGIDGQMTNLLRHMDFYIMPVMNVDGYDYTWKKNRMWRKNRSFYANSHCIGTDLNRNFDAKWCCEGASSSSCSE 157 (300)
T ss_pred HHHHHHhcCCHHHHHHHHhCeEEEEEeecCCceeEEEeccceeecCCCCCCCCCccCcccccccccccCCCCCCCCCCCC
Confidence 999998888999999999999999999999999999998888887654 3467999999999999997542 457
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhCC--CeEEEEecCCCcceeccC
Q psy17405 199 EQPLNVKKLEPETLAMISFIKNNP--FVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 199 ~~~~~~~~sepEt~al~~~~~~~~--~~~~idlH~g~~~~~~yp 240 (241)
.|+|+.|+|||||+||.+++++++ +..+||+|+++.+ ++||
T Consensus 158 ~y~G~~p~SEpEt~av~~~~~~~~~~i~~~is~Hs~g~~-i~~P 200 (300)
T cd06246 158 TYCGPYPESEPEVKAVASFLRRHINQIKAYISMHSYSQM-ILFP 200 (300)
T ss_pred CcCCCCCCccHHHHHHHHHHHhCCcceeEEEEeccCCcE-EEec
Confidence 899999999999999999999985 5679999999988 8898
No 6
>cd03871 M14_CPB Peptidase M14 Carboxypeptidase B (CPB) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Carboxypeptidase B (CPB) enzymes only cleave the basic residues lysine or arginine. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase B (PCPB) is produced by the exocrine pancreas and stored as stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. PCPB has been reported to be a good serum marker for the diagnosis of acute pancreatitis and graft rejection in pancreas transplant recipients.
Probab=100.00 E-value=3.1e-49 Score=346.94 Aligned_cols=190 Identities=20% Similarity=0.314 Sum_probs=173.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHH
Q psy17405 45 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYL 124 (241)
Q Consensus 45 ~~~~y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l 124 (241)
.+.+|++|+||.++|++|+++||+++++.+||+|+|||+|++++|+++. .+||+|+|+||+||+||+|+++++++
T Consensus 2 ~~~~Y~~~~ei~~~l~~la~~~p~~v~~~~IG~S~eGR~i~~l~i~~~~-----~~kp~v~i~~giHarE~i~~~~~l~~ 76 (300)
T cd03871 2 SYEKYNNWETIEAWTEQVASENPDLISRSQIGTTFEGRPIYLLKVGKPG-----VNKPAIFMDCGFHAREWISPAFCQWF 76 (300)
T ss_pred CccccCCHHHHHHHHHHHHHHCCCceEEEEeeeCCCCCeeEEEEEccCC-----CCCCeEEEeccccccccccHHHHHHH
Confidence 4779999999999999999999999999999999999999999999743 36899999999999999999999999
Q ss_pred HHHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCC--CCCCCccCCCCCCCCCCCCCC-----CC
Q psy17405 125 IEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVG--RNNANGVDLNRNFPDQFDSSS-----ER 197 (241)
Q Consensus 125 ~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~--r~n~~GvDlNRnf~~~w~~~~-----~~ 197 (241)
+++|++.|+.|+.++++|++++|+|||++||||++++++.++.|++++.. ..+|.|||||||||..|+..+ |.
T Consensus 77 i~~l~~~y~~d~~~~~lL~~~~~~ivP~~NPDG~~~s~~~~r~wrknr~~~~~~~c~GVDLNRNf~~~w~~~g~s~~pc~ 156 (300)
T cd03871 77 VREAVRTYGREAIMTELLDKLDFYVLPVLNIDGYIYTWTKNRMWRKTRSTNAGSSCIGTDPNRNFNAGWCTVGASRNPCD 156 (300)
T ss_pred HHHHHHHccCCHHHHHHHHcCeEEEEEeecCCcCeeeeccCHHHHHhcCCCCCCCccccccCcCCCCccCCCCCCCCCCC
Confidence 99999999889999999999999999999999999999999888775433 345899999999999997642 45
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHhCC--CeEEEEecCCCcceeccC
Q psy17405 198 REQPLNVKKLEPETLAMISFIKNNP--FVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 198 ~~~~~~~~~sepEt~al~~~~~~~~--~~~~idlH~g~~~~~~yp 240 (241)
..|+|+.|+||||||||++++.+.+ +..++|+|++++. ++||
T Consensus 157 ~~Y~G~~p~SEpEt~Al~~~~~~~~~~~~~~l~~HSyg~~-i~~P 200 (300)
T cd03871 157 ETYCGSAPESEKETKALADFIRNNLSSIKAYLTIHSYSQM-LLYP 200 (300)
T ss_pred CCcCCCCCCCCHHHHHHHHHHHhcCcceeEEEEeccCccE-EEec
Confidence 6899999999999999999999974 5779999999988 8898
No 7
>cd06248 M14_CPA_CPB_like Peptidase M14 Carboxypeptidase A/B-like subfamily: This is one of two main M14 carboxypeptidase subfamilies, defined by sequence and structural homology, the other being N/E. Carboxypeptidases (CPs) hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Majority of the proteins in this subfamily have not been characterized as yet. The A/B enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; the proenzymes are called procarboxypeptidases. These enzymes exhibit distinct substrate specificity pattern; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5,
Probab=100.00 E-value=3.2e-48 Score=341.97 Aligned_cols=192 Identities=24% Similarity=0.348 Sum_probs=173.6
Q ss_pred CCCCCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHH
Q psy17405 46 NPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLI 125 (241)
Q Consensus 46 ~~~y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~ 125 (241)
+++|++|+|+.++|++|+++||+++++.+||+|++||+|++++|++..+ ....||+|+|+||+||+||+|++++++++
T Consensus 1 ~~~Y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~I~~~~~--~~~~k~~v~i~~giHarE~~~~~~~l~~~ 78 (304)
T cd06248 1 FDSYHPLEDHLQWLRDLQAAFPNNSELFTIGKSYEGRTILGLHIWGSGG--EKGSKPAIVIHGTVHAREWISTMTVEYLA 78 (304)
T ss_pred CCccCCHHHHHHHHHHHHHHCCCceEEeceEECCCCCeEEEEEEecCCC--CCCCCcEEEEECCcCcCccccHHHHHHHH
Confidence 3579999999999999999999999999999999999999999997532 24568999999999999999999999999
Q ss_pred HHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCC--CCCCCccCCCCCCCCCCCCC-----CCCC
Q psy17405 126 EYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVG--RNNANGVDLNRNFPDQFDSS-----SERR 198 (241)
Q Consensus 126 ~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~--r~n~~GvDlNRnf~~~w~~~-----~~~~ 198 (241)
++|++.+..|+.++++|++++|+|||++||||+++.++.++.|++++.. ..+|.|||||||||..|+.. .|..
T Consensus 79 ~~L~~~~~~d~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~~~wRknr~~~~~~~~~GVDLNRNf~~~w~~~g~s~~p~s~ 158 (304)
T cd06248 79 YQLLTGYGSDATVTALLDKFDFYIIPVVNPDGFVYTQTSDRLWRKNRQPTSGSSCVGTDLNRNWPYKWDGGGSSTNPCSE 158 (304)
T ss_pred HHHHHhhccCHHHHHHHHhCcEEEEeeecCchhhhhccchhhhhhcCCCCCCCCceeecCCCCCCCcccCCCCCCCCCCC
Confidence 9999998788999999999999999999999999998888888776543 35689999999999999863 2456
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhC----CCeEEEEecCCCcceeccC
Q psy17405 199 EQPLNVKKLEPETLAMISFIKNN----PFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 199 ~~~~~~~~sepEt~al~~~~~~~----~~~~~idlH~g~~~~~~yp 240 (241)
.|+|+.|+|||||+||+++++++ ++.+++|+|+++.. ++||
T Consensus 159 ~Y~G~~~~sEpEt~av~~~~~~~~~~~~~~~~l~~Hs~~~~-i~~P 203 (304)
T cd06248 159 TYRGESPGDAPEAKALAAFLNKLAEGQGIVGYIDWHSYSQL-ILYP 203 (304)
T ss_pred CcCCCCCCccHHHHHHHHHHHhccccCceEEEEEeccCcce-EEec
Confidence 79999999999999999999997 49999999999977 8898
No 8
>cd03869 M14_CPX_like Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Proteins belonging to this subgroup include CP-like protein X1 (CPX1), CP-like protein X2 (CPX2), and aortic CP-like protein (ACLP) and its isoform adipocyte enhancer binding protein-1 (AEBP1). AEBP1 is a truncated form of ACLP, which may arise from alternative splicing of the gene. These proteins are inactive towards standard CP substrates because they lack one or more critical active site and substrate-binding residues that are necessary for activity. They may function as binding proteins rather than as active CPs or display catalytic activity toward other substrates. Pro
Probab=100.00 E-value=6.8e-48 Score=348.23 Aligned_cols=192 Identities=33% Similarity=0.575 Sum_probs=170.7
Q ss_pred CCCCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHH
Q psy17405 47 PHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIE 126 (241)
Q Consensus 47 ~~y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~ 126 (241)
.+||+|+||.++|++|+++||+++++++||+|+|||+|++++|+++++ ....+||.|+++|++||+||+|+++++++++
T Consensus 3 f~yh~y~em~~~L~~la~~yP~i~~l~sIGkS~EGR~L~~l~Is~~~~-~~~~~kP~v~~~g~iHgrE~ig~~~~l~li~ 81 (405)
T cd03869 3 FKHHNYKDMRQLMKVVNEMCPNITRIYNIGKSYQGLKLYAMEISDNPG-EHELGEPEFRYVAGMHGNEVLGRELLLLLMQ 81 (405)
T ss_pred CccCCHHHHHHHHHHHHHHCCCceEEEEeEECcCCceEEEEEEecCCc-cccCCCCeEEEEcccCCCcHHHHHHHHHHHH
Confidence 479999999999999999999999999999999999999999997654 4455799999999999999999999999999
Q ss_pred HHHHhc-CCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCC----CCCCC-------
Q psy17405 127 YLIIND-GTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPD----QFDSS------- 194 (241)
Q Consensus 127 ~L~~~~-~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~----~w~~~------- 194 (241)
+|+++| ..|+.+++||++++|+|+|++||||+++++++.+..+.++.+|.||+|||||||||. .|+..
T Consensus 82 ~L~~~y~~~d~~v~~Ll~~~~i~IvP~~NPDG~e~s~~~~~~~~~Wrk~R~na~GVDLNRNFp~~~~~~W~~~~~~~~~~ 161 (405)
T cd03869 82 FLCQEYLAGNPRVVHLVEETRIHLLPSMNPDGYEKAYEAGSELGGWALGRWTEEGIDINHNFPDLNTILWEAEDKKKVPR 161 (405)
T ss_pred HHHHhhhcCCHHHHHHHhcCeEEEEeeeCCchhhhhhhcCccccccccCccCCCCccccCCCcccccccccccccccccc
Confidence 999988 578999999999999999999999999987764332333456889999999999995 78632
Q ss_pred -------CCCCCCCCCCCCCcHHHHHHHHHHHhCCCeEEEEecCCCcceeccC
Q psy17405 195 -------SERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 195 -------~~~~~~~~~~~~sepEt~al~~~~~~~~~~~~idlH~g~~~~~~yp 240 (241)
.|...|.|..+++||||+||++|+++++|++..++|+|+++ +.||
T Consensus 162 ~~~~~~~Pc~~~Y~G~~~~sEPET~Av~~~i~~~~FvLSanlHgG~lv-~~YP 213 (405)
T cd03869 162 KVPNHHIPIPEWYLSENATVAPETRAVIAWMEKIPFVLGANLQGGELV-VSYP 213 (405)
T ss_pred cccccCCCCccccCCCCCCCcHHHHHHHHHHHhCCceEEEEecCccEE-EEcC
Confidence 24467888899999999999999999999999999999988 5698
No 9
>cd03859 M14_CPT Peptidase M14-like domain of carboxypeptidase (CP) T (CPT), CPT belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT has moderate similarity to CPA and CPB, and exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues like CPA and C-terminal positively charged residues like CPB. CPA and CPB are M14 family peptidases but do not belong to this CPT group. The substrate specificity difference between CPT and CPA and CPB is ascribed to a few amino acid substitutions at the substrate-binding pocket while the spatial organization of the binding site remains the same as in all Zn-CPs. CPT has increased thermal stability in presence of Ca2+ ions, and two disulfide bridges which give an additional stabilization factor.
Probab=100.00 E-value=8.5e-48 Score=338.44 Aligned_cols=191 Identities=31% Similarity=0.459 Sum_probs=173.3
Q ss_pred CCCCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHH
Q psy17405 47 PHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIE 126 (241)
Q Consensus 47 ~~y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~ 126 (241)
..|+||+||.++|++|+++||+++++.+||+|++||+|++++|++++. ....||+|+|+|++||+|++|+++++++++
T Consensus 2 ~~y~~y~ei~~~l~~l~~~~p~~v~~~~iG~S~eGR~i~~l~i~~~~~--~~~~kp~i~i~~~iH~~E~~g~~~~l~~i~ 79 (295)
T cd03859 2 RGYHNYLEMVDELNAAAAAYPNLTKVKSIGKSYEGRDIIAVKISDNVA--TDENKPEVLYTSTHHAREWLSLEMAIYLMH 79 (295)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCceEEEeeeecCCCCeEEEEEEecCCC--CCCCCCEEEEECCcCccchhhHHHHHHHHH
Confidence 479999999999999999999999999999999999999999998653 345799999999999999999999999999
Q ss_pred HHHHhcCCCHHHHHhhcCceEEEEeccCccccccccc--CCCCCCCCCCC----CCCCCccCCCCCCCCCCCCC------
Q psy17405 127 YLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKE--GSCNSLASFVG----RNNANGVDLNRNFPDQFDSS------ 194 (241)
Q Consensus 127 ~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~--~~~~~~~~~~~----r~n~~GvDlNRnf~~~w~~~------ 194 (241)
+|+.++..|+.++++|++++|+|||++||||+++.++ .++.|++++.. +.||.||||||||++.|+..
T Consensus 80 ~L~~~~~~d~~~~~lL~~~~i~ivP~~NPDG~~~~~~~~~~~~wrkn~~~~~~~~~~~~GvDLNRNf~~~w~~~~~g~s~ 159 (295)
T cd03859 80 YLLENYGKDPRIQNLVDNRELWFVPVVNPDGYEYDETTGGYRSWRKNRRDNSGDISSSDGVDLNRNYGYKWGYDSGGSSN 159 (295)
T ss_pred HHHHhhccCHHHHHHHhcCeEEEEeeeCCCcceEEeeccCccceeccCCCCCCCcCcceeecCCCCCCcccCCCCCCCCC
Confidence 9999887789999999999999999999999999887 56666665432 36899999999999999863
Q ss_pred -CCCCCCCCCCCCCcHHHHHHHHHHHhC-CCeEEEEecCCCcceeccC
Q psy17405 195 -SERREQPLNVKKLEPETLAMISFIKNN-PFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 195 -~~~~~~~~~~~~sepEt~al~~~~~~~-~~~~~idlH~g~~~~~~yp 240 (241)
.|...|+|+.|+|||||+||+++++++ ++.+++|+|+++.. ++||
T Consensus 160 ~p~~~~y~G~~p~sepEt~av~~~~~~~~~~~~~l~~Hs~g~~-i~~P 206 (295)
T cd03859 160 DPSSETYRGPSAFSEPETQAIRDFVESHKNIKTALNYHTYSNL-WLYP 206 (295)
T ss_pred CCCCCCccCCCCCchHHHHHHHHHHHhCCCeEEEEEeecCCce-EEeC
Confidence 245789999999999999999999999 99999999999988 8898
No 10
>cd03868 M14_CPD_I The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain I. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at p
Probab=100.00 E-value=5.1e-47 Score=343.15 Aligned_cols=183 Identities=52% Similarity=0.953 Sum_probs=167.4
Q ss_pred CCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHH
Q psy17405 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYL 128 (241)
Q Consensus 49 y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L 128 (241)
|++|+||.++|++|+++||+++++.+||+|++||+|++++|+++++ .....||.|+|+|++||+||+|++++++|+++|
T Consensus 1 Y~~y~ei~~~l~~l~~~~p~~~~l~~iG~S~eGR~i~~l~is~~~~-~~~~~kp~v~~~~~iH~~E~ig~~~~l~l~~~L 79 (372)
T cd03868 1 YHHYEELTDLLHSLAKKYPNIARLHSIGRSVEGRELWVLRITDNVN-RREPGEPMFKYVGNMHGDETVGRQVLIYLAQYL 79 (372)
T ss_pred CCCHHHHHHHHHHHHHHCCCcEEEEeccccCCCceEEEEEEecCCC-CCCCCCCeEEEECCcCCCcHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999998654 345679999999999999999999999999999
Q ss_pred HHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q psy17405 129 IINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLE 208 (241)
Q Consensus 129 ~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~~~~~~~~~~~~se 208 (241)
++++..|++++++|++++|+|||++||||+++.+++++ ++.++.+|.||.|||||||||..|+.... +.+++|
T Consensus 80 ~~~y~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~-~~~~~~~R~n~~GvDLNRnf~~~~~~~~~------~~~~se 152 (372)
T cd03868 80 LENYGGDERVTELVNTTDIYLMPSMNPDGFERSQEGDC-SCGGYGGRENANNVDLNRNFPDQFEGKLQ------RLSERQ 152 (372)
T ss_pred HHhcccCHHHHHHHhCCEEEEEeeeCCchHHhhcccCc-cccCCCccCCCCCccCCCCCCcccCCcCC------CCCCCC
Confidence 99988899999999999999999999999999887775 34455689999999999999999976532 457799
Q ss_pred HHHHHHHHHHHhCCCeEEEEecCCCcceeccC
Q psy17405 209 PETLAMISFIKNNPFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 209 pEt~al~~~~~~~~~~~~idlH~g~~~~~~yp 240 (241)
|||+||++++++++|++++|+|+|++. +.||
T Consensus 153 pEt~av~~~~~~~~~~l~~~lH~~~~~-~~yP 183 (372)
T cd03868 153 PETVAMMKWIRSNPFVLSGNLHGGSVV-ASYP 183 (372)
T ss_pred HHHHHHHHHHhhCCcEEEEEccCccEE-Eecc
Confidence 999999999999999999999999988 7798
No 11
>cd03863 M14_CPD_II The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain II. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, while the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally ac
Probab=100.00 E-value=5.5e-47 Score=341.41 Aligned_cols=180 Identities=48% Similarity=0.754 Sum_probs=165.7
Q ss_pred CCCCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHH
Q psy17405 47 PHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIE 126 (241)
Q Consensus 47 ~~y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~ 126 (241)
..||+|+||.++|++|+++||+++++.+||+|+|||+|++++|+++++ ....+||.|+++|++||+||+|++++++|++
T Consensus 4 f~~h~y~ei~~~l~~l~~~~P~i~~l~~IG~S~eGR~I~~l~Is~~~~-~~~~~kp~v~~~g~iHg~E~ig~~~~l~li~ 82 (375)
T cd03863 4 FRHHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPG-IHEPGEPEFKYIGNMHGNEVVGRELLLNLIE 82 (375)
T ss_pred CccCCHHHHHHHHHHHHHHCCCcEEEEEcccCCccceEEEEEEecCCC-cccCCCCeEEEEccccCCcHHHHHHHHHHHH
Confidence 468999999999999999999999999999999999999999997554 3455799999999999999999999999999
Q ss_pred HHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy17405 127 YLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKK 206 (241)
Q Consensus 127 ~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~~~~~~~~~~~~ 206 (241)
+|+++|+.|+.+++||++++|+|+|++||||+++.+++++.|.+ +|.|++|||||||||..|... ...
T Consensus 83 ~L~~~y~~d~~v~~ll~~~~i~IvP~~NPDG~e~~~~~~~~~~~---~R~n~~GVDLNRNfp~~~~~~---------~~~ 150 (375)
T cd03863 83 YLCKNFGTDPEVTDLVQSTRIHIMPSMNPDGYEKSQEGDRGGTV---GRNNSNNYDLNRNFPDQFFQV---------TDP 150 (375)
T ss_pred HHHHhccCCHHHHHHHhCCEEEEEeccCCchHHheecCCccccc---ccccCCCcccccCCccccccC---------CCC
Confidence 99999988999999999999999999999999999988887753 689999999999999999642 234
Q ss_pred CcHHHHHHHHHHHhCCCeEEEEecCCCcceeccC
Q psy17405 207 LEPETLAMISFIKNNPFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 207 sepEt~al~~~~~~~~~~~~idlH~g~~~~~~yp 240 (241)
+||||+||++++++++|.+++++|||+++ +.||
T Consensus 151 ~EpEt~Av~~~~~~~~f~l~~~lHsg~~~-~~yP 183 (375)
T cd03863 151 PQPETLAVMSWLKSYPFVLSANLHGGSLV-VNYP 183 (375)
T ss_pred CcHHHHHHHHHHhhCCceEEEEecCCCEE-EEcc
Confidence 79999999999999999999999999988 7798
No 12
>cd06245 M14_CPD_III The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain III. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active a
Probab=100.00 E-value=1.4e-46 Score=337.87 Aligned_cols=179 Identities=36% Similarity=0.580 Sum_probs=163.4
Q ss_pred CCCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHH
Q psy17405 48 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEY 127 (241)
Q Consensus 48 ~y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~ 127 (241)
+||+|+||.++|++|+++||+++++.+||+|+|||+|++++|+++++ ...+.||.|+++||+||+||+|++++++++++
T Consensus 1 ~Yh~y~ei~~~l~~l~~~~p~i~~l~~IG~S~eGR~l~~l~Is~~~~-~~~~~kp~v~~~~giHg~E~ig~e~~l~l~~~ 79 (363)
T cd06245 1 RYHHYKELSEFLRGLTLNYPHITNLTSLGQSVEFRPILSLEISNKPN-NSEPEEPKIRFVAGIHGNAPVGTELLLALAEF 79 (363)
T ss_pred CCCCHHHHHHHHHHHHHHCCCceEEEEeeecCCCceEEEEEecCCCC-CCCCCCCEEEEECCccCCcHHHHHHHHHHHHH
Confidence 59999999999999999999999999999999999999999997654 44567999999999999999999999999999
Q ss_pred HHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy17405 128 LIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKL 207 (241)
Q Consensus 128 L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~~~~~~~~~~~~s 207 (241)
|++.++.|+.+++||++++|+|+|++||||+++.+++++. + ..+|.||+|||||||||..| .|..|++
T Consensus 80 L~~~y~~d~~v~~ll~~~~i~ivP~~NPDG~e~~~~~~~~-~--~~~r~na~GvDLNRNf~~~~---------~g~~~~s 147 (363)
T cd06245 80 LCMNYGKNPAVTKLIDRTRIVIVPSLNPDGREKAQEKQCT-S--KEGHTNAHGKDLDTDFTSNA---------SNMSADV 147 (363)
T ss_pred HHHHccCCHHHHHHHhCCEEEEEeccCCchHHHeecCCCc-c--cCCCCCcccccCCCCCCccc---------CCCCCCC
Confidence 9999888999999999999999999999999998776632 2 24689999999999999865 3456789
Q ss_pred cHHHHHHHHHHHhCCCeEEEEecCCCcceeccC
Q psy17405 208 EPETLAMISFIKNNPFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 208 epEt~al~~~~~~~~~~~~idlH~g~~~~~~yp 240 (241)
||||+||++++++.+|.+++++|+|+++ ++||
T Consensus 148 epEt~Av~~~~~~~~f~l~~~lH~~~~~-~~yP 179 (363)
T cd06245 148 QPETKAIIDNLISKDFTLSVALDGGSVV-ATYP 179 (363)
T ss_pred cHHHHHHHHHHHhCCceEEEEEcCCcEE-EEec
Confidence 9999999999999999999999999998 7798
No 13
>cd06905 Peptidase_M14-like_8 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=100.00 E-value=5.1e-46 Score=333.02 Aligned_cols=192 Identities=33% Similarity=0.467 Sum_probs=168.0
Q ss_pred CCCCCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHH
Q psy17405 46 NPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLI 125 (241)
Q Consensus 46 ~~~y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~ 125 (241)
+..|++|+||.++|++|+++||+++++.+||+|+|||+|++++|++... .....||+|+|.|++||+||+|++++++++
T Consensus 1 ~~~Y~ty~ei~~~L~~La~~~P~lv~l~~IG~S~EGR~I~~l~Is~~~~-~~~~~Kp~I~i~~giHarEwig~~~~l~li 79 (360)
T cd06905 1 FSRYYRYDELTAALQAWASAYPQLCSLESIGKSYEGRDIWLLTLTNQAT-GPDREKPAFWIDANIHATEVTGSAVALYVI 79 (360)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCceEEEEeeecCCCCceEEEEecCCCC-CCCCCCcEEEEecCCCCCchHHHHHHHHHH
Confidence 4589999999999999999999999999999999999999999997543 344579999999999999999999999999
Q ss_pred HHHHHhcCCCHHHHHhhcCceEEEEeccCccccccccc-CCCCCCCCCCC------------------------------
Q psy17405 126 EYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKE-GSCNSLASFVG------------------------------ 174 (241)
Q Consensus 126 ~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~-~~~~~~~~~~~------------------------------ 174 (241)
++|++.++.++.++++|++++|+|||++||||++++++ +.+.|++++..
T Consensus 80 ~~Ll~~y~~d~~i~~lLd~~~~~IvP~vNPDG~e~~~~~~~r~wRk~r~~~~~~~~~~g~~~~D~n~D~~~~~mr~~d~~ 159 (360)
T cd06905 80 QTLLNGYGSDPEVTRLLDGYTFYILPRLNPDGAEQALTHPPYVRRSSRRPYPYPDRIDGLYPEDIDGDGLILQMRVKDPC 159 (360)
T ss_pred HHHHHhccCCHHHHHHHhcCeEEEEeeeCCChheEEeeccccccccCCCCcccccccccccccccCccchhheeeccccc
Confidence 99999887899999999999999999999999999887 66655443210
Q ss_pred ---C------------C-----------------------------CCCccCCCCCCCCCCCCCCCCCCCCCCCCCCcHH
Q psy17405 175 ---R------------N-----------------------------NANGVDLNRNFPDQFDSSSERREQPLNVKKLEPE 210 (241)
Q Consensus 175 ---r------------~-----------------------------n~~GvDlNRnf~~~w~~~~~~~~~~~~~~~sepE 210 (241)
+ . .+.||||||||++.|+..+ ...|.|..|+||||
T Consensus 160 g~w~~~~~~p~~m~~~~~~~~~g~~y~~~~eg~~~~~dg~~~~~~~~~~GvDlNRNf~~~W~~~~-~~~y~G~~p~SEpE 238 (360)
T cd06905 160 GAWKVSERDPRIMVRREPDEFGGTYYRLLPEGLIRNYDGYNIKIAPPLEGLDFNRNFPHDWRPEG-EQYGAGPFPFSEPE 238 (360)
T ss_pred cccccccccchhhccccccccCceeeeecccccccccccccccccccccCCCcccCcCCCCCCCC-CcCCCCCCCCChHH
Confidence 0 0 1269999999999997643 45678999999999
Q ss_pred HHHHHHHHHhC-CCeEEEEecCCCcceeccC
Q psy17405 211 TLAMISFIKNN-PFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 211 t~al~~~~~~~-~~~~~idlH~g~~~~~~yp 240 (241)
|+||.+++.++ ++.++|++|++++. ++||
T Consensus 239 t~av~~~~~~~~~i~~~is~Hsyg~~-il~P 268 (360)
T cd06905 239 TRAVVEFWTDHPNINGFISYHTYSGV-ILRP 268 (360)
T ss_pred HHHHHHHHhcCCCeEEEEEecCCcCe-eeeC
Confidence 99999999997 57899999999988 8888
No 14
>cd03867 M14_CPZ Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPZ is a secreted Zn-dependent enzyme whose biological function is largely unknown. Unlike other members of the N/E subfamily, CPZ has a bipartite structure, which consists of an N-terminal cysteine-rich domain (CRD) whose sequence is similar to Wnt-binding proteins, and a C-terminal CP catalytic domain that removes C-terminal Arg residues from substrates. CPZ is enriched in the extracellular matrix and is widely distributed during early embryogenesis. That the CRD of CPZ can bind to Wnt4 suggests that CPZ plays a role in Wnt signaling.
Probab=100.00 E-value=3.2e-46 Score=339.62 Aligned_cols=190 Identities=38% Similarity=0.618 Sum_probs=165.2
Q ss_pred CCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHH
Q psy17405 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYL 128 (241)
Q Consensus 49 y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L 128 (241)
||+|+||.++|++|+++||+++++.+||+|+|||+|++++|+++++ .....||+|+|.||+||+||+|++++++|+++|
T Consensus 1 y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~EGR~i~~l~is~~~~-~~~~~kp~v~i~~giHg~E~ig~~~~~~l~~~L 79 (395)
T cd03867 1 HHSYSQMVSVLKRTAARCSHIARTYSIGRSFEGRDLLVIEFSSNPG-QHELLEPEVKYIGNMHGNEVLGRELLIYLAQFL 79 (395)
T ss_pred CCCHHHHHHHHHHHHHhCCCceEEEEccccCCCceEEEEEeccCCC-cccccCCeEEEEccccCCcHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999997654 445568999999999999999999999999999
Q ss_pred HHhc-CCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCC-------CC---C
Q psy17405 129 IIND-GTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSS-------SE---R 197 (241)
Q Consensus 129 ~~~~-~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~-------~~---~ 197 (241)
++++ ..|+.++++|++++|+|||++||||++++++.++....++.+|.||+|||||||||..|+.. +. .
T Consensus 80 ~~~~~~~d~~v~~ll~~~~i~ivP~~NPDG~e~~~~~~~~~~~wr~~R~n~~GvDLNRNf~~~~~~~~~~~~~~g~~~~~ 159 (395)
T cd03867 80 CSEYLLGNQRIQTLINTTRIHLLPSMNPDGYEAAASEGAGYNGWTNGRQNAQNIDLNRNFPDLTSEVYRRRRQRGARTDH 159 (395)
T ss_pred HHhhhcCCHHHHHHhhCcEEEEEeccCCchHHhhhhcCccccccccCCcCCCCcccccCCCcchhhhcchhhcccccccC
Confidence 9987 57899999999999999999999999998876653333456799999999999999998642 11 1
Q ss_pred CCCCCC--CCCCcHHHHHHHHHHHhCCCeEEEEecCCCcceeccC
Q psy17405 198 REQPLN--VKKLEPETLAMISFIKNNPFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 198 ~~~~~~--~~~sepEt~al~~~~~~~~~~~~idlH~g~~~~~~yp 240 (241)
++.|.+ .+.|||||+||++|+++++|.+++++|||+++ +.||
T Consensus 160 ~p~p~~~~~~~sepEt~Av~~~~~~~~~~l~~s~Hs~~~~-~~yP 203 (395)
T cd03867 160 IPIPDSYWFGKVAPETKAVMKWMRSIPFVLSASLHGGDLV-VSYP 203 (395)
T ss_pred CCCccccccCccCHHHHHHHHHHhhCCceEEEEccCccee-EEcc
Confidence 122211 34689999999999999999999999999988 7798
No 15
>cd03864 M14_CPN Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3.4.17.3) is an extracellular glycoprotein synthesized in the liver and released into the blood, where it is present in high concentrations. CPN belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPN plays an important role in protecting the body from excessive buildup of potentially deleterious peptides that normally act as local autocrine or paracrine hormones. It specifically removes C-terminal basic residues. As CPN can cleave lysine more avidly than arginine residues it is also called lysine carboxypeptidase. CPN substrates inclu
Probab=100.00 E-value=4.5e-46 Score=336.96 Aligned_cols=190 Identities=44% Similarity=0.656 Sum_probs=164.1
Q ss_pred CCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHH
Q psy17405 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYL 128 (241)
Q Consensus 49 y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L 128 (241)
||+|+||.++|++|+++||+++++.+||+|++||+|++++|+++++ .....||.|+++|++||+|++|++++++|+++|
T Consensus 1 ~h~y~em~~~L~~l~~~yP~i~~l~sIG~SveGR~i~~l~is~~~~-~~~~~kp~v~~~g~iHg~E~ig~e~ll~l~~~L 79 (392)
T cd03864 1 HHRYDDLVRALYAVQNECPYITRIYSIGRSVEGRHLYVLEFSDNPG-IHEPLEPEFKYVGNMHGNEVLGRELLIQLSEFL 79 (392)
T ss_pred CCCHHHHHHHHHHHHHHCCCeEEEEEeeeccCCceEEEEEecCCCc-cccCCCCEEEEEcccCCCcHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999998654 445679999999999999999999999999999
Q ss_pred HHhc-CCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCC----CCCCC----
Q psy17405 129 IIND-GTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSS----SERRE---- 199 (241)
Q Consensus 129 ~~~~-~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~----~~~~~---- 199 (241)
+++| .+++++++||++++|+|||++||||++++.++.+.+.....+|.|++|||||||||..|... ...++
T Consensus 80 ~~~y~~~d~~v~~lL~~~~i~ivP~~NPDG~e~~~~~~~~~~~~~~~R~Na~GVDLNRNFp~~~~~~~~~~~~~g~~~~~ 159 (392)
T cd03864 80 CEEYRNGNERITRLIQDTRIHILPSMNPDGYEVAARQGPEFNGYLVGRNNANGVDLNRNFPDLNTLMYYNEKYGGPNHHL 159 (392)
T ss_pred HHhcccCCHHHHHHHhcCeEEEEeeeCCchHHhhhccCCCcCccccccccccCcccccCCCcccccchhhhccCCccccC
Confidence 9988 45899999999999999999999999998766554444446799999999999999875422 11110
Q ss_pred --CCCCCCCCcHHHHHHHHHHHhCCCeEEEEecCCCcceeccC
Q psy17405 200 --QPLNVKKLEPETLAMISFIKNNPFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 200 --~~~~~~~sepEt~al~~~~~~~~~~~~idlH~g~~~~~~yp 240 (241)
.....+++||||+||++|+++++|++++|+|||+++ +.||
T Consensus 160 P~~~~~~~~~epET~Av~~~~~~~~fvls~nlHgG~~v-~~YP 201 (392)
T cd03864 160 PLPDNWKSQVEPETLAVIQWMQNYNFVLSANLHGGAVV-ANYP 201 (392)
T ss_pred CCccccccccCHHHHHHHHHHHhcCcEEEEEccCCcee-eeCC
Confidence 001136799999999999999999999999999999 5598
No 16
>smart00631 Zn_pept Zn_pept.
Probab=100.00 E-value=9.1e-46 Score=323.10 Aligned_cols=187 Identities=39% Similarity=0.572 Sum_probs=170.1
Q ss_pred CCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHH
Q psy17405 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYL 128 (241)
Q Consensus 49 y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L 128 (241)
|+||+|+.++|++|+++||+++++.+||+|.+||+|++++|+++. ...||.|+|+|++||+|++|++++++++++|
T Consensus 1 y~ty~e~~~~l~~l~~~~~~~v~~~~iG~S~~Gr~i~~~~i~~~~----~~~k~~v~i~a~~Hg~E~~g~~~~~~~i~~L 76 (277)
T smart00631 1 YHSYEEIEAWLKELAARYPDLVRLVSIGKSVEGRPIWVLKISDGG----SHNKPAIFIDAGIHAREWIGPATALYLINQL 76 (277)
T ss_pred CCCHHHHHHHHHHHHHHCCCceEEEeceecCCCCceEEEEEeCCC----CCCCcEEEEECCccccccccHHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999753 2358999999999999999999999999999
Q ss_pred HHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCC--CCCCCCCCCCCC
Q psy17405 129 IINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSS--SERREQPLNVKK 206 (241)
Q Consensus 129 ~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~--~~~~~~~~~~~~ 206 (241)
+.+++.++.++.+|++++|+|||++||||+++.+++++.|++++....|+.||||||||+..|+.. .+...|+|+.|+
T Consensus 77 ~~~~~~~~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~~~wr~~r~~~~~~~GvDLNRnf~~~w~~~~~p~~~~y~G~~~~ 156 (277)
T smart00631 77 LENYGRDPRITKLLDKTDIYIVPVLNPDGYEYTHTGDRLWRKNRSPNSNCRGVDLNRNFPFHWGKTGNPCSETYAGPSPF 156 (277)
T ss_pred HHhcccCHHHHHHHHcCcEEEEEeecCchhhheecccccccCCCCCCCCCcCcccCCCCCCCCCCCCCCCCCCcCCCCCC
Confidence 998877899999999999999999999999998888877765444335899999999999999873 245678999999
Q ss_pred CcHHHHHHHHHHHhC-CCeEEEEecCCCcceeccC
Q psy17405 207 LEPETLAMISFIKNN-PFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 207 sepEt~al~~~~~~~-~~~~~idlH~g~~~~~~yp 240 (241)
||||||||++++.++ +|++++|+|+++.. ++||
T Consensus 157 sepEt~ai~~~~~~~~~~~~~id~Hs~~~~-i~~p 190 (277)
T smart00631 157 SEPETKAVRDFIRSNRRFVLYIDLHSYSQL-ILYP 190 (277)
T ss_pred CcHHHHHHHHHHHhcCCeeEEEEeccCCcE-EEec
Confidence 999999999999999 99999999999866 7888
No 17
>cd03858 M14_CP_N-E_like Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappr
Probab=100.00 E-value=1.3e-45 Score=334.44 Aligned_cols=183 Identities=51% Similarity=0.823 Sum_probs=168.2
Q ss_pred CCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHH
Q psy17405 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYL 128 (241)
Q Consensus 49 y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L 128 (241)
|++|+||.++|++|+++||+++++.+||+|++||+|++++|++++. .....||.|+|+||+||+||+|++++++|+++|
T Consensus 1 Y~~y~ei~~~l~~l~~~~p~~~~~~~iG~S~eGR~i~~l~i~~~~~-~~~~~kp~v~i~agiH~~E~~g~~~~~~l~~~L 79 (374)
T cd03858 1 YHNYAELESFLKEVAANYPNITRLYSIGKSVQGRDLWVLEISDNPG-VHEPGEPEFKYVGNMHGNEVVGRELLLRLAQYL 79 (374)
T ss_pred CCCHHHHHHHHHHHHHhCCCceEEEEcccCCCCCEEEEEEEecCCC-CCCCCCceEEEeccccCCchhHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999998654 334579999999999999999999999999999
Q ss_pred HHhcC-CCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy17405 129 IINDG-TDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKL 207 (241)
Q Consensus 129 ~~~~~-~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~~~~~~~~~~~~s 207 (241)
+.++. .|+.+++||++++|+|||++||||+++.+++++.|++ +|.|+.|||||||||..|+..+. .|+.+++
T Consensus 80 ~~~~~~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~w~~---~R~n~~GvDLNRnf~~~~~~~~~----~G~~~~s 152 (374)
T cd03858 80 CENYGAGDPRITRLVDNTRIHIMPSMNPDGYEKAAEGDCGGLT---GRYNANGVDLNRNFPDLFFTNYR----SSDNGPR 152 (374)
T ss_pred HHHhccCCHHHHHHHhCCEEEEEcccCCchhhhhcccCCcccc---cCCCCcceecccCCCcccccccc----cCCCccc
Confidence 99875 7899999999999999999999999999888877654 68899999999999999976644 5777889
Q ss_pred cHHHHHHHHHHHhCCCeEEEEecCCCcceeccC
Q psy17405 208 EPETLAMISFIKNNPFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 208 epEt~al~~~~~~~~~~~~idlH~g~~~~~~yp 240 (241)
|||||||++++++++|++++|+|+++.. +.||
T Consensus 153 epEt~al~~~~~~~~~~~~i~~Hs~~~~-~~yp 184 (374)
T cd03858 153 QPETKAVMNWIKSIPFVLSANLHGGALV-ANYP 184 (374)
T ss_pred CHHHHHHHHHHhhCCceEEEEccCCceE-EEcc
Confidence 9999999999999999999999999976 8888
No 18
>cd06227 Peptidase_M14-like_2 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=100.00 E-value=2.7e-45 Score=317.96 Aligned_cols=182 Identities=23% Similarity=0.252 Sum_probs=165.0
Q ss_pred CCC-HHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHH
Q psy17405 49 YLS-FDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEY 127 (241)
Q Consensus 49 y~t-y~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~ 127 (241)
||+ ++||.++|++|+++||+ +++.++|+|++||+|++++++.... ....||.|+|.||+||+||+|++++++|+++
T Consensus 2 Yh~~~~ei~~~l~~l~~~~p~-~~~~~ig~S~egr~i~~i~~~~~~~--~~~~k~~i~i~agiHarE~i~~~~~l~li~~ 78 (272)
T cd06227 2 YHTATDEINEEADALVKNIRL-SRLGELIESVKVRNFSSITLNPNGD--PSKKKVKALLLFGEHARELISPETGLHLLSN 78 (272)
T ss_pred ccCCHHHHHHHHHHHHHHCCC-cEEeeeeeccCCceeeEEEecCCCC--CCCCCCEEEEECCccCCchhhHHHHHHHHHH
Confidence 899 99999999999999999 8999999999999999999997533 1146899999999999999999999999999
Q ss_pred HHHhcCC----CHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCC---CCCCC
Q psy17405 128 LIINDGT----DERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSSS---ERREQ 200 (241)
Q Consensus 128 L~~~~~~----~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~---~~~~~ 200 (241)
|+.++.. ++.++++|++++|+|||++||||+++.+++++ .+|+|++|||||||||+.|+... |...|
T Consensus 79 L~~~~~~~~~~~~~~~~lL~~~~i~ivP~~NPDG~~~~~~~~~------~wR~N~~GVDLNRNf~~~w~~~~~~~~~~~y 152 (272)
T cd06227 79 LCGELAETFDWGDLLKNILDNFDLKIIPNENPDGRKKVESGNY------CLRENENGVDLNRNYGADWGFKEDDYEDEEY 152 (272)
T ss_pred HHHhcccccchhHHHHHHHhcCcEEEEeccCCchheeEeccCc------ccccCCccccccccCCcccccCCCCcccccc
Confidence 9998643 37899999999999999999999999877664 46888999999999999998653 56789
Q ss_pred CCCCCCCcHHHHHHHHHHHhCCCeEEEEecCCCcceeccC
Q psy17405 201 PLNVKKLEPETLAMISFIKNNPFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 201 ~~~~~~sepEt~al~~~~~~~~~~~~idlH~g~~~~~~yp 240 (241)
+|+.|+|||||+||++++++++|++++|+|+++.. ++||
T Consensus 153 ~G~~~~sEpEt~av~~~~~~~~~~~~i~~Hs~~~~-i~~P 191 (272)
T cd06227 153 SGPAPFSEPETRVLRDLLTSFSPDVFLSVHSGTLA-LFTP 191 (272)
T ss_pred CCCCCCCcHHHHHHHHHHHhCCCeEEEEeccCCCE-EEec
Confidence 99999999999999999999999999999999977 8887
No 19
>cd03866 M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPM is an extracellular glycoprotein, bound to cell membranes via a glycosyl-phosphatidylinositol on the C-terminus of the protein. It specifically removes C-terminal basic residues such as lysine and arginine from peptides and proteins. The highest levels of CPM have been found in human lung and placenta, but significant amounts are present in kidney, blood vessels, intestine, brain, and peripheral nerves. CPM has also been found in soluble form in various body fluids, including amniotic fluid, seminal plasma and urine. Due to its wide distribution in a variety of tissues, it is believed that it plays an important role in the cont
Probab=100.00 E-value=1.8e-45 Score=332.37 Aligned_cols=179 Identities=46% Similarity=0.799 Sum_probs=162.7
Q ss_pred CCCCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHH
Q psy17405 47 PHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIE 126 (241)
Q Consensus 47 ~~y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~ 126 (241)
.+|++|+||.++|++|+++||+++++.+||+|+|||+|++++|++.+. .....||.|+++|++||+||+|+++++++++
T Consensus 3 ~~Y~~~~ei~~~l~~l~~~~p~i~~l~~IG~S~eGR~i~~l~ig~~~~-~~~~~~P~v~~~~~iHg~E~ig~~~~l~l~~ 81 (376)
T cd03866 3 FNYHNTEQMEAYLKDVNKNYPSITHLHSIGQSVEGRELWVLVLGRFPR-EHRIGIPEFKYVANMHGNEVVGRELLLHLID 81 (376)
T ss_pred cccCCHHHHHHHHHHHHHhCCCcEEEEEeeccCCCceEEEEEeccCCc-cccCCCCeEEEEcccCCCcHHHHHHHHHHHH
Confidence 579999999999999999999999999999999999999999997543 3456789999999999999999999999999
Q ss_pred HHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy17405 127 YLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKK 206 (241)
Q Consensus 127 ~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~~~~~~~~~~~~ 206 (241)
+|+++|+.|+.++++|++++|+|+|++||||+++.+ .++.|+ .+|.||+|||||||||..|+... ..
T Consensus 82 ~L~~~y~~d~~i~~lL~~~~i~ivP~~NPDG~e~~~-~~~~~~---~~R~N~~GvDLNRnf~~~w~~~~---------~~ 148 (376)
T cd03866 82 YLVTSYGSDPVITRLLNSTRIHIMPSMNPDGFEASK-PDCYYS---VGRYNKNGYDLNRNFPDAFEENN---------EQ 148 (376)
T ss_pred HHHHhcCCCHHHHHHHhCCEEEEEeccCCchhhhcc-cccccc---cccccCCCcccCcCchhhhccCC---------CC
Confidence 999998889999999999999999999999999974 445443 47999999999999999997541 23
Q ss_pred CcHHHHHHHHHHHhCCCeEEEEecCCCcceeccC
Q psy17405 207 LEPETLAMISFIKNNPFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 207 sepEt~al~~~~~~~~~~~~idlH~g~~~~~~yp 240 (241)
+||||+||++++++++|++++|+|+|+++ +.||
T Consensus 149 sepEt~al~~~~~~~~~~l~~~~H~~~~~-~~YP 181 (376)
T cd03866 149 RQPETRAVMEWLKSETFVLSANLHGGALV-ASYP 181 (376)
T ss_pred CcHHHHHHHHHHHhcCcEEEEEccCCceE-Eecc
Confidence 89999999999999999999999999988 7788
No 20
>cd03860 M14_CP_A-B_like The Peptidase M14 Carboxypeptidase (CP) A/B subfamily is one of two main M14 CP subfamilies defined by sequence and structural homology, the other being the N/E subfamily. CPs hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5, CPA6, CPB, CPO and CPU. CPA1, CPA2 and CPB are produced by the
Probab=100.00 E-value=3.2e-45 Score=322.11 Aligned_cols=185 Identities=28% Similarity=0.364 Sum_probs=167.6
Q ss_pred CCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHH
Q psy17405 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYL 128 (241)
Q Consensus 49 y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L 128 (241)
|+||+||.++|++|++++|+++++.+||+|.+||+|++++|++.. ...||+|+|+|++||+|++|++++++++++|
T Consensus 1 Y~ty~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~l~i~~~~----~~~k~~v~i~~~~Hg~E~~g~~~~~~~~~~L 76 (294)
T cd03860 1 YHTYDEIYAWLDELAQKYPDLVTVETIGRSYEGRPIKGVKISNGG----RSNKPAIFIDAGIHAREWISPATALYIINQL 76 (294)
T ss_pred CCCHHHHHHHHHHHHHHCCCceEEEeeeeCCCCCeEEEEEEecCC----CCCCcEEEEECCcCcCccccHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999864 2468999999999999999999999999999
Q ss_pred HHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCC--CCCCCccCCCCCCCCCCCCC-----CCCCCCC
Q psy17405 129 IINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVG--RNNANGVDLNRNFPDQFDSS-----SERREQP 201 (241)
Q Consensus 129 ~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~--r~n~~GvDlNRnf~~~w~~~-----~~~~~~~ 201 (241)
+.++ ++.++++|++++|+|||++||||+++.+++++.|++++.. +.++.|||||||||..|+.. .+...|+
T Consensus 77 ~~~~--~~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~wrknr~~~~~~~~~GvDLNRnf~~~w~~~~~~~~p~~~~y~ 154 (294)
T cd03860 77 VESY--DPEVTDLLDNYDWYILPVANPDGYEYTHTTDRLWRKNRSPNSGGGCVGVDLNRNFDYHWGGGGASSDPCSETYA 154 (294)
T ss_pred HHcc--CHHHHHHHHcCeEEEEeeecCCchhhhccccchhcccCCCCCCCCceeeccCCCCCCCCccCCCCCCCCCCCcc
Confidence 9854 3788999999999999999999999988888877765432 46799999999999999864 2456799
Q ss_pred CCCCCCcHHHHHHHHHHHhC--CCeEEEEecCCCcceeccC
Q psy17405 202 LNVKKLEPETLAMISFIKNN--PFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 202 ~~~~~sepEt~al~~~~~~~--~~~~~idlH~g~~~~~~yp 240 (241)
|+.|+|||||+||+++++++ +|++++|+|+++.. ++||
T Consensus 155 G~~~~sepEt~al~~~~~~~~~~~~~~ld~Hs~~~~-i~~P 194 (294)
T cd03860 155 GPSAFSEPETRAVRDFLLSLRGRIKAYLSLHSYGQL-ILYP 194 (294)
T ss_pred CCCCCchHHHHHHHHHHHhccccEEEEEEeccCCce-EEcC
Confidence 99999999999999999999 79999999999976 8888
No 21
>cd03865 M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (CPE, also known as carboxypeptidase H, and enkephalin convertase; EC 3.4.17.10) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPE is an important enzyme responsible for the proteolytic processing of prohormone intermediates (such as pro-insulin, pro-opiomelanocortin, or pro-gonadotropin-releasing hormone) by specifically removing C-terminal basic residues. In addition, it has been proposed that the regulated secretory pathway (RSP) of the nervous and endocrine systems utilizes membrane-bound CPE as a sorting receptor. A naturally occurring point mutation in CPE reduces the stability of the enzyme and causes its degradation, leading to an accumulation of numerous neuroendocrine pe
Probab=100.00 E-value=3.4e-45 Score=330.73 Aligned_cols=192 Identities=41% Similarity=0.635 Sum_probs=162.0
Q ss_pred CCCCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHH
Q psy17405 47 PHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIE 126 (241)
Q Consensus 47 ~~y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~ 126 (241)
.+||+|+||.++|++++++||+++++.+||+|+|||+|++++|+++++ ....+||.|+++|++||+||+|.++++++++
T Consensus 3 f~Yh~y~e~~~~L~~l~~~~p~i~~l~~IG~S~eGR~I~~l~Is~~~~-~~~~~kP~v~i~g~iHg~E~ig~~~~l~l~~ 81 (402)
T cd03865 3 FEYHRYPELREALVSVWLQCPSISRIYTVGRSFEGRELLVIEMSDNPG-EHEPGEPEFKYIGNMHGNEAVGRELLIYLAQ 81 (402)
T ss_pred cccCCHHHHHHHHHHHHHHCCCceEEEecccccCCCeEEEEEeecCCC-CCCCCCCEEEEECCcCCCcHHHHHHHHHHHH
Confidence 479999999999999999999999999999999999999999997654 4556799999999999999999999999999
Q ss_pred HHHHhc-CCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCC----CCCC---
Q psy17405 127 YLIIND-GTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSS----SERR--- 198 (241)
Q Consensus 127 ~L~~~~-~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~----~~~~--- 198 (241)
+|+++| .+|+.+++||++++|+|+|++||||+++..++......++.+|.|++|||||||||..+... ...+
T Consensus 82 ~L~~~y~~~d~~v~~LLd~~~i~IvP~~NPDG~e~~~~~~~~~~~w~~~R~Na~GvDLNRNFp~~~~~~~~~~~~~~~~~ 161 (402)
T cd03865 82 YLCNEYQKGNETIINLIHSTRIHIMPSLNPDGFEKAASQPGELKDWFVGRSNAQGIDLNRNFPDLDRIVYVNEREGGPNN 161 (402)
T ss_pred HHHHhcccCCHHHHHHHhcCEEEEEeeeCCchHHhhhhcCccccchhhhcccccCcccCCCCCcccchhhhhhccCCCcc
Confidence 999988 45899999999999999999999999987553322222445799999999999999864321 0000
Q ss_pred ----CCCCC---CCCCcHHHHHHHHHHHhCCCeEEEEecCCCcceeccC
Q psy17405 199 ----EQPLN---VKKLEPETLAMISFIKNNPFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 199 ----~~~~~---~~~sepEt~al~~~~~~~~~~~~idlH~g~~~~~~yp 240 (241)
..++. ....+|||+||++|+++.+|++..+||||+++ +.||
T Consensus 162 ~~~~~~~~~~~~~~~~~pEt~Avm~w~~~~~FvlsanlHgG~lv-a~YP 209 (402)
T cd03865 162 HLLKNMKKAVDENTKLAPETKAVIHWIMDIPFVLSANLHGGDLV-ANYP 209 (402)
T ss_pred ccccccccccccccCCChHHHHHHHHHHhCCcEEEEEccCccEE-EECC
Confidence 11111 12469999999999999999999999999999 5598
No 22
>cd06226 M14_CPT_like Peptidase M14-like domain of an uncharacterized group of Peptidase M14 Carboxypeptidase (CP) T (CPT)-like proteins. This group belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues and C-terminal positively charged residues. However, CPT does not belong to this CPT-like group.
Probab=100.00 E-value=4.9e-43 Score=306.56 Aligned_cols=173 Identities=26% Similarity=0.345 Sum_probs=151.9
Q ss_pred CCCCeEEEEeeeeC------CCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHH
Q psy17405 66 NPSKVKLHSIGKSV------QNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVT 139 (241)
Q Consensus 66 ~p~~v~~~~iG~S~------~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~ 139 (241)
||+++++.+||+|+ +||+|++++|++.........||+|+|+|++||+||+|++++++++++|++++..++.++
T Consensus 1 ~p~~~~~~~iG~S~~~~~~~eGR~I~~l~ig~~~~~~~~~~kp~v~i~~~iHarE~ig~~~~l~~i~~L~~~~~~d~~v~ 80 (293)
T cd06226 1 YPNLAQWVDIGDSWDKPGGPAGYDIRALKLTNKATNSPTGPKPVFFIMGAIHAREYTTAELVLRFAEDLLEGYGTDADAT 80 (293)
T ss_pred CCcceEEEEeeEecccCcccCCceEEEEEEecCCCCcCCCCCCEEEEECCcCCCcHHHHHHHHHHHHHHHHhcccCHHHH
Confidence 68999999999999 999999999997553224567999999999999999999999999999999887889999
Q ss_pred HhhcCceEEEEeccCcccccccccCCCCCCCCCC------CCCCCCccCCCCCCCCCCCCC------CCCCCCCCCCCCC
Q psy17405 140 RLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFV------GRNNANGVDLNRNFPDQFDSS------SERREQPLNVKKL 207 (241)
Q Consensus 140 ~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~------~r~n~~GvDlNRnf~~~w~~~------~~~~~~~~~~~~s 207 (241)
++|++++|+|||++||||++++++ ++.|++++. .+.|+.|||||||||+.|+.. .|...|.|+.|+|
T Consensus 81 ~lL~~~~i~ivP~~NPDG~~~~~~-~~~wRkNr~~~~~~~~~~n~~GVDLNRNf~~~w~~~~~~~~~p~~~~y~G~~p~S 159 (293)
T cd06226 81 WLLDYHEIHVVPIVNPDGRKIAEQ-GLSQRKNANTSGGSNCSGSSYGVDLNRNYSFGWGGAGASSGDPCSETYRGPAPGS 159 (293)
T ss_pred HHHhcCeEEEEecccCCcceeecc-CcceeccCCCCCCCCccccccccccccCCCCcCCcCCCCCCCCCCCCcCCCCCCC
Confidence 999999999999999999999765 445555432 356779999999999999754 2456799999999
Q ss_pred cHHHHHHHHHHHhCC----------------CeEEEEecCCCcceeccC
Q psy17405 208 EPETLAMISFIKNNP----------------FVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 208 epEt~al~~~~~~~~----------------~~~~idlH~g~~~~~~yp 240 (241)
|||||||++++.++. +.++||+|+++.. ++||
T Consensus 160 EpEt~Av~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~HS~g~~-i~~P 207 (293)
T cd06226 160 EPETAALEDYIRGLFPDQRGPGDTDPAPDDTTGVYLDIHSYSNL-VLYP 207 (293)
T ss_pred cHHHHHHHHHHHhccccccccccccccccccceEEEEeccCCCe-Eeec
Confidence 999999999999986 6789999999988 8898
No 23
>PF00246 Peptidase_M14: Zinc carboxypeptidase This is family M14 in the peptidase classification. ; InterPro: IPR000834 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of sequences contain a diverse range of gene families, which include metallopeptidases belonging to MEROPS peptidase family M14 (carboxypeptidase A, clan MC), subfamilies M14A and M14B. The carboxypeptidase A family can be divided into two subfamilies: carboxypeptidase H (regulatory) and carboxypeptidase A (digestive) []. Members of the H family have longer C-termini than those of family A [], and carboxypeptidase M (a member of the H family) is bound to the membrane by a glycosylphosphatidylinositol anchor, unlike the majority of the M14 family, which are soluble []. The zinc ligands have been determined as two histidines and a glutamate, and the catalytic residue has been identified as a C-terminal glutamate, but these do not form the characteristic metalloprotease HEXXH motif [, ]. Members of the carboxypeptidase A family are synthesised as inactive molecules with propeptides that must be cleaved to activate the enzyme. Structural studies of carboxypeptidases A and B reveal the propeptide to exist as a globular domain, followed by an extended alpha-helix; this shields the catalytic site, without specifically binding to it, while the substrate-binding site is blocked by making specific contacts [, ]. Other examples of protein families in this entry include: Intron maturase Putative mitochondrial processing peptidase alpha subunit Superoxide dismutase [Mn] (1.15.1.1 from EC) Asparagine synthetase [glutamine-hydrolysing] 3 (6.3.5.4 from EC) Glucose-6-phosphate isomerase (5.3.1.9 from EC) ; GO: 0004181 metallocarboxypeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 3DGV_A 3OSL_C 3D4U_A 2NSM_A 1QMU_A 1H8L_A 2PJ2_A 2PJ9_A 1ZG8_A 1Z5R_A ....
Probab=100.00 E-value=1.5e-42 Score=302.83 Aligned_cols=180 Identities=37% Similarity=0.538 Sum_probs=154.2
Q ss_pred HHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHHHhcCC
Q psy17405 55 LTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIINDGT 134 (241)
Q Consensus 55 i~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~ 134 (241)
|.++|++|+++||+++++.+||+|.+||+|++++|+++.. .....||.|+|+|++||+|++|+++++.++++|+..+ +
T Consensus 1 i~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~-~~~~~k~~v~i~~~~Hg~E~~g~~~~l~~~~~L~~~~-~ 78 (279)
T PF00246_consen 1 INAYLDALAARYPDIVRLESIGKSYEGRPIYALTIGSNSN-GSDPGKPTVLIIAGIHGNEWIGSEALLYLIEELLSGY-D 78 (279)
T ss_dssp HHHHHHHHHHHSTTTEEEEEEEE-TTS-EEEEEEESSSTT-TTSTTSEEEEEEE-SSTT-THHHHHHHHHHHHHHHHT-T
T ss_pred CHHHHHHHHHHCCCcEEEEEeeECCCCCeEEEEEeecccc-cccccccceEEEecccccccCchHHHHHHHHHhhccc-c
Confidence 6789999999999999999999999999999999998644 4566799999999999999999999999999999976 7
Q ss_pred CHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCC-----CCCCCCCCCCCCCcH
Q psy17405 135 DERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSS-----SERREQPLNVKKLEP 209 (241)
Q Consensus 135 ~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~-----~~~~~~~~~~~~sep 209 (241)
++.++.||++++|+|||++||||+++.+..++.|.+ +|.|..||||||||+..|+.. .+...|+|+.|+|||
T Consensus 79 ~~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~w~~---~R~n~~GvDlNRnf~~~w~~~~~~~~~~~~~y~g~~~~sep 155 (279)
T PF00246_consen 79 DPEVKELLDNVVIYIIPMVNPDGYEYGTSGDRGWRK---NRSNANGVDLNRNFPYQWNEEGSSSNPCSETYRGPAPFSEP 155 (279)
T ss_dssp SHHHHHHHHHEEEEEES-SSHHHHHHHHHT-TTCCS---TSSBTTS--GGGSSSSSTTSSSSBSSTTSTTB--SSTTTSH
T ss_pred chhhhhhcccceEEEEeeecccceeeeeeccccccc---ccccccccccccccCcccccccccCCCCCcccCCCcchhhh
Confidence 899999999999999999999999998877666655 489999999999999999654 245678999999999
Q ss_pred HHHHHHHHHHhCCCeEEEEecCCCcceeccC
Q psy17405 210 ETLAMISFIKNNPFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 210 Et~al~~~~~~~~~~~~idlH~g~~~~~~yp 240 (241)
|||||++++++++|++++|+|+++.. +.||
T Consensus 156 Et~al~~~~~~~~~~~~id~H~~~~~-~~~p 185 (279)
T PF00246_consen 156 ETRALRNLIQDWNPDFFIDFHSGGNA-ILYP 185 (279)
T ss_dssp HHHHHHHHHHHTTEEEEEEEEESSSE-EEES
T ss_pred HHHHHHHHHhhcceeEEEeccccccc-eeee
Confidence 99999999999999999999999977 5576
No 24
>cd06228 Peptidase_M14-like_3 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=100.00 E-value=1.5e-40 Score=293.62 Aligned_cols=161 Identities=19% Similarity=0.220 Sum_probs=142.9
Q ss_pred EeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHHHhcC------------CCHHHHHh
Q psy17405 74 SIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIINDG------------TDERVTRL 141 (241)
Q Consensus 74 ~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~------------~~~~~~~l 141 (241)
..++|+|||+|++++|+.+.. ..||+|+|+|++||+||++++++++++++|+..+. .+++++++
T Consensus 5 ~~~~S~EgR~I~~l~I~~~~~----~~kp~V~i~ggiHAREwis~~~~l~~i~~Ll~~y~~~~~~~yg~~~~~d~~v~~l 80 (332)
T cd06228 5 LPHKTYEGRTPHGAKIGAGTL----TSRYGALFIGGVHARERGSPDNLIYFVSDLLNARKAGRGIKYGGRTYTAADVKAI 80 (332)
T ss_pred CCCCCCCCCeeEEEEEeCCCC----CCCCEEEEEccccccchhhHHHHHHHHHHHHHhhhccccccccccccccHHHHHH
Confidence 358999999999999997532 46899999999999999999999999999999763 37889999
Q ss_pred hcCceEEEEeccCcccccccccCCCCCCCCCCC-----CCCCCccCCCCCCCCCCCCC---------------CCCCCCC
Q psy17405 142 INTTDIFIIPSLNPDGYSAAKEGSCNSLASFVG-----RNNANGVDLNRNFPDQFDSS---------------SERREQP 201 (241)
Q Consensus 142 l~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~-----r~n~~GvDlNRnf~~~w~~~---------------~~~~~~~ 201 (241)
|+ ++|+|||++||||++++++.++.|++++.. ..+|.||||||||++.|+.. .|...|+
T Consensus 81 L~-~~i~IvP~vNPDGy~~s~~~~r~WRKNr~~~~~~~~~~c~GVDLNRNf~~~W~~~~~~~~~~~~~g~S~~Pcse~Y~ 159 (332)
T cd06228 81 LD-AGIVVFPLVNPDGRAHDQTANSCWRKNRNPASAGPNPSSVGVDINRNFDFLWDFQKYFDPGASRSVASTDPASETFH 159 (332)
T ss_pred Hh-CeEEEEEeecCcchhheeccchhhhccCCCCcccccCcccccccCCCCCCCcCcccccccccccCCCCCCCCccccC
Confidence 99 999999999999999999988888876542 23799999999999999731 2567899
Q ss_pred CCCCCCcHHHHHHHHHHHhCC-CeEEEEecCCCcceeccC
Q psy17405 202 LNVKKLEPETLAMISFIKNNP-FVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 202 ~~~~~sepEt~al~~~~~~~~-~~~~idlH~g~~~~~~yp 240 (241)
|+.||||||||||++++++.+ +.++||+|+++.. ++||
T Consensus 160 G~~pfSEPET~av~~~~~~~~~~~~yls~HSygq~-il~P 198 (332)
T cd06228 160 GTAAFSEPETRNVVWVMDTFKNIRWFVDLHSYGGD-VLYS 198 (332)
T ss_pred CCCCCccHHHHHHHHHHhccCCeEEEEEeccCCce-EEec
Confidence 999999999999999999986 9999999999988 8898
No 25
>cd06229 M14_Endopeptidase_I Peptidase M14-like domain of Gamma-D-glutamyl-L-diamino acid endopeptidase 1 (also known as Gamma-D-glutamyl-meso-diaminopimelate peptidase I, and Endopeptidase I (ENP1); EC 3.4.19.11). ENP1 is a member of the M14 family of metallocarboxypeptidases (MCPs). However it has an exceptional type of activity of hydrolyzing the gamma-D-Glu-(L)meso-diaminopimelic acid (gamma-D-Glu-Dap) bond of L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid and L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid(L)-D-Ala peptides. ENP1has a different substrate specificity and cellular role than MpaA (MpaA does not belong to this group). ENP1 hydrolyzes the gamma-D-Glu-Dap bond of MurNAc-tripeptide and MurNAc-tetrapeptide, as well as the amide bond of free tripeptide and tetrapeptide . ENP1 is active on spore cortex peptidoglycan, and is produced at stage IV of sporulation in forespore and spore integuments.
Probab=100.00 E-value=1.2e-38 Score=275.08 Aligned_cols=154 Identities=26% Similarity=0.376 Sum_probs=133.3
Q ss_pred eCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHHHhcCC-----CHHHHHhhcCceEEEEec
Q psy17405 78 SVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIINDGT-----DERVTRLINTTDIFIIPS 152 (241)
Q Consensus 78 S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~-----~~~~~~ll~~~~v~ivP~ 152 (241)
|++||+|++++|+++ +|.|+|+|++||+||+|++++++++++|+..+.. +..+++||++++|+|||+
T Consensus 1 S~eGR~I~~~~ig~~--------~~~v~i~agiHarE~~~~~~~l~~i~~L~~~~~~~~~~~~~~~~~lL~~~~i~ivP~ 72 (255)
T cd06229 1 SVLGRDIYEVKLGNG--------PKTVFYNASFHAREWITTLLLMKFIEEYARAYENNEKLGGYDLRELLENVTICFVPM 72 (255)
T ss_pred CCCCceeeEEEEcCC--------CceEEEECCccccchhhHHHHHHHHHHHHHHhccCccccchhHHHHHhcCeEEEEeC
Confidence 789999999999963 2799999999999999999999999999998743 346799999999999999
Q ss_pred cCcccccccccCCC----------CCCCCC----CCCCCCCccCCCCCCCCCCCCCC------CCCCCCCCCCCCcHHHH
Q psy17405 153 LNPDGYSAAKEGSC----------NSLASF----VGRNNANGVDLNRNFPDQFDSSS------ERREQPLNVKKLEPETL 212 (241)
Q Consensus 153 ~NPDG~~~~~~~~~----------~~~~~~----~~r~n~~GvDlNRnf~~~w~~~~------~~~~~~~~~~~sepEt~ 212 (241)
+||||+++++++.. .|++++ ..|.||.|||||||||+.|+..+ +...|.|+.|+||||||
T Consensus 73 ~NPDG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~GVDLNRNf~~~w~~~~~~s~~p~~~~y~G~~p~SEpEtr 152 (255)
T cd06229 73 VNPDGVEIVQNGPYAIRNYYLELLVINAGSINFKEWKANARGVDLNRNFPAGWEKEKAGPKAPAPRNYKGEQPLSEPETI 152 (255)
T ss_pred ccCCchheeeecccccccchhhhHHhhcCCCcccccccCCcccccCCCCCCCCCcCCCCCCCCCccCcCCCCCCCchhHH
Confidence 99999999876532 222221 23789999999999999997643 56789999999999999
Q ss_pred HHHHHHHhCCCeEEEEecCCCcceeccC
Q psy17405 213 AMISFIKNNPFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 213 al~~~~~~~~~~~~idlH~g~~~~~~yp 240 (241)
||++++++++|+++||+|+++.. ++||
T Consensus 153 al~~~~~~~~~~~~i~~Hs~g~~-i~~~ 179 (255)
T cd06229 153 ALAELTRENRFRAVLAYHSQGEE-IYWG 179 (255)
T ss_pred HHHHHHHhCCCeEEEEecCCCCe-EEec
Confidence 99999999999999999999976 8787
No 26
>cd06242 Peptidase_M14-like_1_5 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=100.00 E-value=5.7e-38 Score=271.94 Aligned_cols=155 Identities=23% Similarity=0.243 Sum_probs=139.6
Q ss_pred CCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHH
Q psy17405 49 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYL 128 (241)
Q Consensus 49 y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L 128 (241)
+.+|+|+.++|++|++++|.+.++.++|+|+|||||++++|+++++......||+|+|+||+||+|++|+++++.++++|
T Consensus 2 ~t~y~e~~~~l~~La~~~~~i~~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~V~i~~giHg~E~~g~~a~l~ll~~L 81 (268)
T cd06242 2 PTSHEEMESFMKSLASKNDWMSYHSDIGKSEEGRSIPYVYLSTSKSSSSSSKKLRVWLQGGVHGNEPAGDEAALALLGKL 81 (268)
T ss_pred CCCHHHHHHHHHHHHHHCCCeEEEEECccccCCceeEEEEEecCCccccCCCCCEEEEECCcCCCCHHHHHHHHHHHHHH
Confidence 67899999999999999998766999999999999999999975421235678999999999999999999999999999
Q ss_pred HHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q psy17405 129 IINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLE 208 (241)
Q Consensus 129 ~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~~~~~~~~~~~~se 208 (241)
+.+ +...++|++++|+|||++||||+++. .|.||.|+||||||... ++
T Consensus 82 ~~~----~~~~~lL~~~~i~ivP~~NPDG~~~~------------~R~na~g~DlNRD~~~~----------------~~ 129 (268)
T cd06242 82 DNN----PKWASVLEKIDIIVLPRYNPDGSAYF------------QRTLATGYDPNRDHTKL----------------AR 129 (268)
T ss_pred HhC----chHHHHHhcCeEEEEeccCcchhhhc------------cccCCcCcccCCCCCcc----------------cC
Confidence 974 23458999999999999999999885 78999999999999764 79
Q ss_pred HHHHHHHHHHHhCCCeEEEEecCCCcc
Q psy17405 209 PETLAMISFIKNNPFVLSGNLHGKKPN 235 (241)
Q Consensus 209 pEt~al~~~~~~~~~~~~idlH~g~~~ 235 (241)
||+|++++++.+++|++++|+|+.+..
T Consensus 130 pEtra~~~~~~~~~P~v~iD~He~~~~ 156 (268)
T cd06242 130 QQTRDIKEAFSKFNPHIAIDAHEYGAF 156 (268)
T ss_pred HHHHHHHHHHHHhCCcEEEEeccCCcc
Confidence 999999999999999999999998765
No 27
>KOG2649|consensus
Probab=100.00 E-value=9.5e-38 Score=280.59 Aligned_cols=191 Identities=45% Similarity=0.699 Sum_probs=169.9
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHH
Q psy17405 45 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYL 124 (241)
Q Consensus 45 ~~~~y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l 124 (241)
.+..||+|++|.++|++++++||.+.++++||+|++||+++++.|++.++ .+..++|.+-++|++||+|..|.|.++.+
T Consensus 65 l~f~hh~y~~m~~~l~~~~~~~p~itrlYSiGkSv~Gr~L~Vle~sd~Pg-eH~~gePEfKyv~nmHGnE~vGRElll~L 143 (500)
T KOG2649|consen 65 LTFGHHNYDDLEKALKDFTKRCPNITRLYSIGKSVEGRELWVIEISDRPG-EHEPGEPEFKYIGNMHGNEVVGRELLLRL 143 (500)
T ss_pred ccCCCCCHHHHHHHHHHHHhhCCcceeeeeccccccCceEEEEEcCCCCC-cccCCCCcceeeeeccccccccHHHHHHH
Confidence 46789999999999999999999999999999999999999999999887 88899999999999999999999999999
Q ss_pred HHHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCC------
Q psy17405 125 IEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSSSERR------ 198 (241)
Q Consensus 125 ~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~~~~------ 198 (241)
+++||.+|.+|+.++.|++++.|.|+|.+|||||+....+.+.| ..+|.|++|+|||||||..+.......
T Consensus 144 ~e~Lc~~y~~n~~i~~Lv~~trIHlmPSmNPDGyE~a~~~~~~~---~~GR~Nang~DLNrnFPd~~~~~~~~~~~~~~n 220 (500)
T KOG2649|consen 144 AEYLCDNYGKDPRITQLVNNTRIHIMPSMNPDGYEIAKRGDRGW---ATGRNNANGVDLNRNFPDQFRLVYFIVTFDLLN 220 (500)
T ss_pred HHHHHHhcCCChHHHHHHhhceEEEecccCcchhhhhhcccccc---eecccCccccchhccCcccccceeeeeeecccc
Confidence 99999999999999999999999999999999999987755433 358999999999999999765432110
Q ss_pred ----CCCCCCCCCcHHHHHHHHHHHhCCCeEEEEecCCCcceeccC
Q psy17405 199 ----EQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 199 ----~~~~~~~~sepEt~al~~~~~~~~~~~~idlH~g~~~~~~yp 240 (241)
.+.......+|||+|+++||.+++|++..+||||+++ +.||
T Consensus 221 ~~l~~~~~~~~~~~pEt~Avm~W~~~~pFvLSAnLHGG~lv-anYP 265 (500)
T KOG2649|consen 221 SHLIMFNDDLNLRQPETIAVMKWLRDIPFVLSANLHGGALV-ANYP 265 (500)
T ss_pred cccccccccccccCccHHHHHHHHhhcceeeeccccCCceE-EEcc
Confidence 0112223579999999999999999999999999999 5598
No 28
>cd06237 M14_Nna1_like_3 A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP),-like proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.
Probab=100.00 E-value=1.6e-37 Score=265.62 Aligned_cols=156 Identities=26% Similarity=0.405 Sum_probs=139.4
Q ss_pred CCCCCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHH
Q psy17405 46 NPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLI 125 (241)
Q Consensus 46 ~~~y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~ 125 (241)
.+.-++++|+.+++++|++. +.+++.+||+|++||||+++++++++ .||.|+|+|++||+|++|+.+++.|+
T Consensus 4 ~~~~~~~~~i~~~l~~L~~~--~~v~~~~iG~S~eGR~i~~l~ig~~~------~k~~v~i~~~iH~~E~~g~~~~~~~~ 75 (244)
T cd06237 4 AQELIDNQDVKDWVDSLIKQ--PFVELELLGLSTQGRPLKALERGNPD------SKEWIVVISRQHPPEVTGALAMKAFI 75 (244)
T ss_pred ceeeCCHHHHHHHHHHHhcC--CCeEEEEeeEcCCCCEEEEEEecCCC------CCceEEEEcCcCCCcHHHHHHHHHHH
Confidence 44568899999999999765 67999999999999999999998654 37999999999999999999999999
Q ss_pred HHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCC
Q psy17405 126 EYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVK 205 (241)
Q Consensus 126 ~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~~~~~~~~~~~ 205 (241)
++|+. +++.++.+|++++|+|||++||||+++. .+|+|.+|+||||||+.
T Consensus 76 ~~l~~---~~~~~~~ll~~~~i~ivP~~NPDG~~~~-----------~wR~N~~GvDLNRnw~~---------------- 125 (244)
T cd06237 76 ETLLS---DSELAKKFRAKYNVLLVPNMNPDGVDLG-----------HWRHNANGIDLNRDWSN---------------- 125 (244)
T ss_pred HHHHh---CCHHHHHHHHhCEEEEEEeeCcchhhcC-----------CccCCCCCcCCCCCCCC----------------
Confidence 99986 3456799999999999999999999974 26899999999999974
Q ss_pred CCcHHHHHHHHHHHh-----CCCeEEEEecCCCcceeccC
Q psy17405 206 KLEPETLAMISFIKN-----NPFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 206 ~sepEt~al~~~~~~-----~~~~~~idlH~g~~~~~~yp 240 (241)
+++|||+++++++++ .+|++++|+|+++.. ++||
T Consensus 126 ~sepEt~a~~~~~~~~~~~~~~~~~~id~Hs~~~~-i~~~ 164 (244)
T cd06237 126 FNQPETRAIRDYLVRLVKEGGKIVFALDFHSTWHD-VFYT 164 (244)
T ss_pred CCCHHHHHHHHHHHHHhccCCCEEEEEEeccCCcc-eEec
Confidence 389999999999986 489999999999977 8887
No 29
>cd06234 M14_Nna1_like_1 A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP)-like proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.
Probab=100.00 E-value=4e-37 Score=265.20 Aligned_cols=161 Identities=23% Similarity=0.341 Sum_probs=143.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHH
Q psy17405 42 PFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELM 121 (241)
Q Consensus 42 ~~~~~~~y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~ 121 (241)
.|+.+...++|+++.++++++++. ..++..++|+|++||+|++++|++.. .+||.|+|+|++||+|+.|.+++
T Consensus 3 ~~~ay~~Pys~~~~~~~l~~~~~~--~~v~~~~iG~S~eGR~i~~l~I~~~~-----~~k~~V~i~a~iH~~E~~g~~~~ 75 (263)
T cd06234 3 VYFAYFAPYSYERHLALIARAQGA--PDVRLEVLGQTVQGRDIDLLTFGEPG-----PGKKKLWIIARQHPGETMAEWFM 75 (263)
T ss_pred EEEEEeCCCCHHHHHHHHHHHhcC--CCeEEEEEEEcCCCCeEEEEEEccCC-----CCCCEEEEECCCCCCcHHHHHHH
Confidence 355667789999999999999873 47999999999999999999998643 25899999999999999999999
Q ss_pred HHHHHHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCC
Q psy17405 122 NYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSSSERREQP 201 (241)
Q Consensus 122 ~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~~~~~~~ 201 (241)
..|+++|+. ..|+.++++|++++|+|||++||||+.+. ..|.||.|+||||||+.
T Consensus 76 ~~ll~~L~~--~~d~~~~~ll~~~~~~IvP~~NPDG~~~g-----------~~R~n~~GvDLNRnw~~------------ 130 (263)
T cd06234 76 EGLLERLLD--PDDAVARALLEKAVFYVVPNMNPDGSARG-----------HLRTNAAGANLNREWAE------------ 130 (263)
T ss_pred HHHHHHHhh--cCCHHHHHHHhcCEEEEEeeecchhhhhc-----------CCccCCCCCCCCCCCCC------------
Confidence 999999998 46889999999999999999999999874 25889999999999973
Q ss_pred CCCCCCcHHHHHHHHHHHhCCCeEEEEecCCCcc
Q psy17405 202 LNVKKLEPETLAMISFIKNNPFVLSGNLHGKKPN 235 (241)
Q Consensus 202 ~~~~~sepEt~al~~~~~~~~~~~~idlH~g~~~ 235 (241)
+.++++||+++|+++|++.++++++|+|+.+..
T Consensus 131 -p~~~s~PEt~av~~~~~~~~~~~~ld~Hs~~~~ 163 (263)
T cd06234 131 -PSAERSPEVFAVRQRMEETGVDFFLDVHGDEAL 163 (263)
T ss_pred -CCCCCCHHHHHHHHHHHhcCCeEEEEeCCCCCC
Confidence 236689999999999999999999999999865
No 30
>cd06908 M14_AGBL4_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-4, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL4 and the mouse cytosolic carboxypeptidase (CCP)-6. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal
Probab=100.00 E-value=7.4e-37 Score=263.06 Aligned_cols=155 Identities=25% Similarity=0.243 Sum_probs=138.1
Q ss_pred HHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHH
Q psy17405 59 LVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERV 138 (241)
Q Consensus 59 l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~ 138 (241)
|++|++++|++++..+||+|++||+|++++|+++++.....+||.|+|+|++||+|++|+.+++.+++.|+. +++.+
T Consensus 1 l~~l~~~~p~~~~~~~iG~S~eGR~i~~l~It~~~~~~~~~~k~~I~i~ariHp~E~~~s~~~~~li~~L~~---~~~~~ 77 (261)
T cd06908 1 LDALEKRSLDYFRREQLGQSVQKRRLDLLTIDSPDNLREDSEKKVIFITARVHPGESPSSYVCQGLIDFLVS---NHPIA 77 (261)
T ss_pred ChHHHhhCCCcEEEEEeEEcCCCCeeEEEEEcCCCccccCCCCcEEEEECCcCCCChHHHHHHHHHHHHHhh---CCHHH
Confidence 478899999999999999999999999999997543233457999999999999999999999999999997 37899
Q ss_pred HHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHH
Q psy17405 139 TRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFI 218 (241)
Q Consensus 139 ~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~~~~~~~~~~~~sepEt~al~~~~ 218 (241)
+.|+++++|+|||++||||+++. ..|.+|.|+||||||+. +.++++||++++++++
T Consensus 78 ~~L~~~~~~~IvP~~NPDGv~~g-----------n~R~~~~G~DLNR~w~~-------------p~~~~~PEv~av~~~i 133 (261)
T cd06908 78 KVLREHLVFKIVPMLNPDGVFLG-----------NYRCSLMGHDLNRHWHD-------------PSPWAHPTLHAVKNLL 133 (261)
T ss_pred HHHHHhCcEEEEeeecCcceeec-----------CCcCcCcCcCCCCCCCC-------------CCcccChHHHHHHHHH
Confidence 99999999999999999999984 25899999999999974 2467899999999999
Q ss_pred HhC------CCeEEEEecCCCcceeccC
Q psy17405 219 KNN------PFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 219 ~~~------~~~~~idlH~g~~~~~~yp 240 (241)
++. ++++++|+|+++...+.||
T Consensus 134 ~~~~~~~~~~i~~~lD~H~hs~~~~~F~ 161 (261)
T cd06908 134 KELDNDSTTQLDFYIDLHAHSSLMNCFI 161 (261)
T ss_pred HHhhhccccCeeEEEEeeccccccceee
Confidence 984 7899999999998866675
No 31
>cd06241 Peptidase_M14-like_1_4 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=100.00 E-value=1.9e-34 Score=249.74 Aligned_cols=157 Identities=25% Similarity=0.300 Sum_probs=132.9
Q ss_pred HHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCC----CCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHHHhc
Q psy17405 57 KFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVA----SGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIIND 132 (241)
Q Consensus 57 ~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~----~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~ 132 (241)
+|+++|++++| .+++.+||+|.+||+|++++|+.+.. .....+||+|+|+||+||+|+.|+++++.++++|+.+.
T Consensus 1 a~~~~La~~~~-~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~~~~~kp~v~i~agiH~~E~~G~~a~~~ll~~L~~~~ 79 (266)
T cd06241 1 AFLERLAAASP-LIRLESFGKTPEGRPLHLLVLSKDGAFTPEEAKRSGKPVVLVQAGIHAGEIDGKDAGLMLLRDLADGK 79 (266)
T ss_pred CHHHHHHHhCC-ceEEEEeEeCCCCCeeEEEEEecCCccchhhhcccCCCEEEEeCCcCCCCchHHHHHHHHHHHHHhcc
Confidence 47899999986 58999999999999999999997542 12235799999999999999999999999999999842
Q ss_pred CCCHHHHHhhcCceEEEEeccCcccccccccCCCCC---CCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCcH
Q psy17405 133 GTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNS---LASFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEP 209 (241)
Q Consensus 133 ~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~---~~~~~~r~n~~GvDlNRnf~~~w~~~~~~~~~~~~~~~sep 209 (241)
. .++|++++|+|||++||||+++.....+.. .....+|.|++|+||||||+.. ++|
T Consensus 80 --~---~~ll~~~~i~ivP~~NpDG~~~~~~~~r~~q~gp~~~~~R~na~g~DLNRdf~~~----------------~~p 138 (266)
T cd06241 80 --K---DALLDKVVLVFIPVFNVDGHERRSPYNRTNQNGPEEYGWRGNARNLNLNRDFIKL----------------DAP 138 (266)
T ss_pred --h---HHHHhCCEEEEEeCCCccHHHhcccccccccCCCCccCceecccceecCCCCccc----------------CCH
Confidence 2 289999999999999999999864433322 1224579999999999999864 699
Q ss_pred HHHHHHHHHHhCCCeEEEEecCCCcc
Q psy17405 210 ETLAMISFIKNNPFVLSGNLHGKKPN 235 (241)
Q Consensus 210 Et~al~~~~~~~~~~~~idlH~g~~~ 235 (241)
|+|++.+++++++|+++||+|+.+..
T Consensus 139 Etra~~~~~~~~~p~~~iD~H~~~g~ 164 (266)
T cd06241 139 EMRAFAKLFNKWNPDLFIDNHVTDGA 164 (266)
T ss_pred HHHHHHHHHHHhCCCEEEEeccCCCc
Confidence 99999999999999999999988654
No 32
>cd06239 Peptidase_M14-like_1_2 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=100.00 E-value=8.2e-34 Score=240.37 Aligned_cols=136 Identities=30% Similarity=0.466 Sum_probs=124.9
Q ss_pred HHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHh
Q psy17405 62 AAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRL 141 (241)
Q Consensus 62 la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~l 141 (241)
+.+++|+.+++.++|+|.+||||++++|+++ ||+|+|.|++||+|+.|+++++.|+++|+.. .+..++++
T Consensus 2 ~~~~~p~~v~~~~iG~S~eGrpI~~l~ig~g--------~~~vli~agiHG~E~~g~~all~ll~~L~~~--~~~~~~~l 71 (231)
T cd06239 2 LLEKLPAKFKVEVIGKSVEGRPIYSVKFGSG--------KIKILLWSQMHGNESTTTKALLDLLNFLGTS--KDQEAKKI 71 (231)
T ss_pred hHHHCCCeeEEEEeeECCCCCeEEEEEEcCC--------CcEEEEEeccCCCCHHHHHHHHHHHHHHHHC--CCHHHHHH
Confidence 4577899999999999999999999999963 5899999999999999999999999999984 45566899
Q ss_pred hcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC
Q psy17405 142 INTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN 221 (241)
Q Consensus 142 l~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~~~~~~~~~~~~sepEt~al~~~~~~~ 221 (241)
|++++|+|||++||||++.. +|.|+.|+||||||+.. ++||+++++++++++
T Consensus 72 l~~~~v~iiP~lNPDG~~~~------------~R~N~~GvDLNRdf~~~----------------s~PEtr~l~~~~~~~ 123 (231)
T cd06239 72 LDEVTLVIIPMLNPDGAEAY------------TRVNANGVDLNRDAQDL----------------SQPESRLLRDVYDGF 123 (231)
T ss_pred HhCCEEEEEeccCccHHHHc------------ccCCCcCCcCCCCCCCC----------------ChHHHHHHHHHHHhc
Confidence 99999999999999999873 78999999999999854 799999999999999
Q ss_pred CCeEEEEecCCCcc
Q psy17405 222 PFVLSGNLHGKKPN 235 (241)
Q Consensus 222 ~~~~~idlH~g~~~ 235 (241)
+|++++|+|+++..
T Consensus 124 ~pd~~iDlH~~~~~ 137 (231)
T cd06239 124 QPDFCFNLHDQRTI 137 (231)
T ss_pred CCEEEEEECCCCCc
Confidence 99999999999865
No 33
>cd03856 M14_Nna1_like Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subfamily includes the human AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. M
Probab=100.00 E-value=6.2e-34 Score=246.86 Aligned_cols=152 Identities=20% Similarity=0.277 Sum_probs=134.9
Q ss_pred CCCCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHH
Q psy17405 47 PHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIE 126 (241)
Q Consensus 47 ~~y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~ 126 (241)
....+|.+....++.++ +..+++.+||+|.+||||++++++... +||+|+|+|++||+|++|+++++.+++
T Consensus 8 ~~~~~y~~~~~l~~sl~---~~~v~l~~IG~s~egr~i~~~~~~~~~------~k~~i~i~a~iH~~E~~~~~~~~~li~ 78 (269)
T cd03856 8 HANQIYDRRLALCESLQ---GNSCDLLTITSPPEGNDIKYEHLCSFA------NKKYIFLIARVHPGETNASWVMKGFLE 78 (269)
T ss_pred cCCcCHHHHHHHHHHhc---CCceeEEEeccCCCCccccceeccCCC------CCcEEEEEcCcCCCchHHHHHHHHHHH
Confidence 34678889999998886 667999999999999999999887543 589999999999999999999999999
Q ss_pred HHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy17405 127 YLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKK 206 (241)
Q Consensus 127 ~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~~~~~~~~~~~~ 206 (241)
+|+.+ ++.++.+|++++|+|||++||||+++. .+|.|+.|+||||||+. +.++
T Consensus 79 ~Ll~~---~~~~~~ll~~~~~~ivP~~NPDG~~~g-----------~~R~n~~G~DLNR~~~~-------------p~~~ 131 (269)
T cd03856 79 FLLSD---NPTAQSLRESFVFKIVPMLNPDGVIRG-----------NYRCSLSGVDLNRQWQN-------------PSPD 131 (269)
T ss_pred HHHhC---CHHHHHHHhcCeEEEEeeeCCcccccc-----------CCcCCCCCCCcCCCCCC-------------CCCC
Confidence 99873 456899999999999999999999873 26899999999999973 2467
Q ss_pred CcHHHHHHHHHHHhC-----CCeEEEEecCCCc
Q psy17405 207 LEPETLAMISFIKNN-----PFVLSGNLHGKKP 234 (241)
Q Consensus 207 sepEt~al~~~~~~~-----~~~~~idlH~g~~ 234 (241)
++||++++++++.++ ++++++|+|+++.
T Consensus 132 ~~pE~~~~~~~~~~~~~~~~~~~~~idlH~~~~ 164 (269)
T cd03856 132 LHPEIYLVKGLMLYLAAGKRGVLFYCDFHGHSR 164 (269)
T ss_pred CCCCHHHHHHHHHHHHhccCCceEEEEecCCCc
Confidence 899999999999998 8999999999994
No 34
>cd06235 M14_Nna1_like_2 Subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human Nna1/AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induc
Probab=100.00 E-value=2.5e-33 Score=241.97 Aligned_cols=148 Identities=27% Similarity=0.295 Sum_probs=128.6
Q ss_pred CCCCeEEEEeeeeCCCCeeEEEEEecCCC-CCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcC
Q psy17405 66 NPSKVKLHSIGKSVQNRDLWALQISRNVA-SGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINT 144 (241)
Q Consensus 66 ~p~~v~~~~iG~S~~Gr~i~~~~is~~~~-~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~ 144 (241)
.+..++..++|+|.+||+|++++|++... .....+||.|+|+|++||+|++|+++++.+++.|+. +++.++.|+++
T Consensus 9 ~~~~~~~~~iG~S~eGr~i~~l~i~~~~~~~~~~~~k~~V~i~a~iH~~E~~~s~~~~~ll~~Ll~---~~~~~~~Ll~~ 85 (258)
T cd06235 9 NNQYLKRKILCTTLGGLPVPLLTITSPSSKSIPIKKKKVIVITARQHPGETNSSFVMQGFIDFLLS---DSPEAQYLREN 85 (258)
T ss_pred CCCceEEEEeEEcCCCCeeeEEEEeCCcccccccCCCcEEEEECCcCCCChHHHHHHHHHHHHHhc---CCHHHHHHHhc
Confidence 46779999999999999999999997432 123457899999999999999999999999999986 35679999999
Q ss_pred ceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC---
Q psy17405 145 TDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN--- 221 (241)
Q Consensus 145 ~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~~~~~~~~~~~~sepEt~al~~~~~~~--- 221 (241)
++|+|||++||||+.+. ..|.|+.|+||||||... .++++||+++++++++++
T Consensus 86 ~~~~iiPm~NPDG~~~g-----------~~R~n~~GvDLNR~w~~p-------------~~~~~PE~~~~~~~i~~~~~~ 141 (258)
T cd06235 86 FIFKIIPMLNPDGVIHG-----------NYRCSLSGIDLNRQWKNP-------------DKKLHPEIYHVKQLIKKLSQE 141 (258)
T ss_pred cEEEEEccccccceeec-----------CCcCCCCCCCcCCCCCCC-------------CcccCcHHHHHHHHHHHHhcc
Confidence 99999999999999763 269999999999999842 256899999999999997
Q ss_pred -CCeEEEEecCCCcceeccC
Q psy17405 222 -PFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 222 -~~~~~idlH~g~~~~~~yp 240 (241)
++++++|+|+++...+.|+
T Consensus 142 ~~~~~~iDlH~~s~~~~~F~ 161 (258)
T cd06235 142 RNIALFIDLHGHSRKKNSFM 161 (258)
T ss_pred CCceEEEecccccccCCeee
Confidence 8999999999998766553
No 35
>cd03862 Peptidase_M14-like_7 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=100.00 E-value=3.6e-33 Score=242.03 Aligned_cols=144 Identities=24% Similarity=0.383 Sum_probs=125.0
Q ss_pred CCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEEEeccCccccc
Q psy17405 80 QNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYS 159 (241)
Q Consensus 80 ~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~ 159 (241)
...||+++++++.. .+||+|+|+||+||+|++|++++++++++|+..+.+|+.+++++++++|+|||++||||+.
T Consensus 8 ~~~pi~~v~ig~~~-----~~~p~v~i~~giHg~E~ig~~~~l~~l~~L~~~~~~d~~~~~ll~~~~i~ivP~vNPdG~~ 82 (273)
T cd03862 8 LRFPIYALELGSPD-----PKAPVLGLVGGVHGLERIGTQVLLAFLESLLERLRWDKLLQELLEKVRLVFLPLVNPVGMA 82 (273)
T ss_pred CcceeEEEEecCCC-----CCCCEEEEEcCcCCCcHHHHHHHHHHHHHHHHhccccHHHHHHHhCCeEEEEeccCcCHHH
Confidence 35789999998643 3679999999999999999999999999999998889999999999999999999999987
Q ss_pred ccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCC--------C---CCCCCCCCCC-CCCcHHHHHHHHHHHhC----CC
Q psy17405 160 AAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDS--------S---SERREQPLNV-KKLEPETLAMISFIKNN----PF 223 (241)
Q Consensus 160 ~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~--------~---~~~~~~~~~~-~~sepEt~al~~~~~~~----~~ 223 (241)
.. +|.|++|||||||||..|+. . .|...|.|.. ++|||||+||++++++. ++
T Consensus 83 ~~------------~R~n~~GVDLNRNfp~~~~~~~~~~~~G~~~~p~~~~Y~G~~~~~sEpEt~al~~~~~~~~~~~~~ 150 (273)
T cd03862 83 LK------------TRSNGNGVDLMRNAPVDAEDKPPFLVGGQRLSPRLPWYRGKNGAGMELEAQALCRFVRELLFESPF 150 (273)
T ss_pred hc------------ccCCCCCcccCCCCCCCccccccccccCccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCe
Confidence 63 78899999999999998863 1 1334677875 89999999999999985 78
Q ss_pred eEEEEecCCCc--ceeccC
Q psy17405 224 VLSGNLHGKKP--NKVKFP 240 (241)
Q Consensus 224 ~~~idlH~g~~--~~~~yp 240 (241)
.+++|+|||.. +.+.||
T Consensus 151 ~~~ld~HSg~G~~~~i~~P 169 (273)
T cd03862 151 SIALDCHSGFGLVDRIWFP 169 (273)
T ss_pred EEEEEECCCCCccCEEEcC
Confidence 99999999753 557888
No 36
>cd06243 Peptidase_M14-like_1_6 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=100.00 E-value=4.6e-33 Score=236.64 Aligned_cols=128 Identities=28% Similarity=0.423 Sum_probs=116.6
Q ss_pred eeeeCCCCeeEEEEEecCCCC--CCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEEEec
Q psy17405 75 IGKSVQNRDLWALQISRNVAS--GRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPS 152 (241)
Q Consensus 75 iG~S~~Gr~i~~~~is~~~~~--~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~ 152 (241)
||+|+|||||++++|++..+. .....||+|+|++++||+|++|+++++.++++|+. +.++.++++|++++|+|+|+
T Consensus 1 iG~S~eGRpi~~l~i~~~~~~~~~~~~~~p~v~i~~giHG~E~~G~~a~l~ll~~L~~--~~~~~~~~lL~~~~i~ivP~ 78 (236)
T cd06243 1 IGTSQRGRPIHLVRVGFAEGPSALDIANRPTVLLVGTQHGDEPAGREALLIIARDLAF--GEDEELVPLLHQTTVLFVPT 78 (236)
T ss_pred CccCCCCCeeEEEEEecCCCccccccCCCCEEEEECCcCCCChHHHHHHHHHHHHHHh--cCCHHHHHHHhcceEEEEeC
Confidence 699999999999999976531 12457899999999999999999999999999987 56788999999999999999
Q ss_pred cCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCCeEEEEecCC
Q psy17405 153 LNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGK 232 (241)
Q Consensus 153 ~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~~~~~~~~~~~~sepEt~al~~~~~~~~~~~~idlH~g 232 (241)
+||||+++. +|.|+.|+||||||+.. ++|||++|++++.+++|++++|+|+.
T Consensus 79 ~NPDG~~~~------------~R~n~~g~DlNRd~~~~----------------~~pEt~al~~~~~~~~p~~~iDlHe~ 130 (236)
T cd06243 79 ANPDGREAD------------TRSNADGIDINRDHLLL----------------NTPEAQALASVLRDYRPDVVVDAHEY 130 (236)
T ss_pred cCccHhhcC------------CcCCCCCcccCCCCCCC----------------CCHHHHHHHHHHHhcCCEEEEEeCCC
Confidence 999999874 78999999999999854 79999999999999999999999998
No 37
>cd06238 Peptidase_M14-like_1_1 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. T
Probab=100.00 E-value=9.9e-33 Score=239.02 Aligned_cols=141 Identities=19% Similarity=0.199 Sum_probs=119.9
Q ss_pred eeeeCCCCeeEEEEEecCCCC---------------------CCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHHHhcC
Q psy17405 75 IGKSVQNRDLWALQISRNVAS---------------------GRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIINDG 133 (241)
Q Consensus 75 iG~S~~Gr~i~~~~is~~~~~---------------------~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~ 133 (241)
+|+|.|||||.++.|++..+. .....||+|+|.++|||+|++|++++++++++|++ .
T Consensus 1 ~G~s~egR~l~~~~I~s~~n~~~l~~~~~~~~~la~p~~~~~~~~~~~~~v~i~~~iH~~E~~g~~~~l~l~~~L~~--~ 78 (271)
T cd06238 1 YGRTHEGRPLLLATITSPENIARLDQIREDHLALADPAATSSLISDQPVVVWLGYSVHGNEISGTEAALLTAYHLAA--A 78 (271)
T ss_pred CCcCCCCCeeEEEEEeCHHHHHhHHHHHHHHHHhcCccccccccccCCcEEEEECCcCCCChHHHHHHHHHHHHHHH--c
Confidence 699999999999999986431 12346889999999999999999999999999998 4
Q ss_pred CCHHHHHhhcCceEEEEeccCcccccc-cc----------cCCCCCC----CCCCCCCCCCccCCCCCCCCCCCCCCCCC
Q psy17405 134 TDERVTRLINTTDIFIIPSLNPDGYSA-AK----------EGSCNSL----ASFVGRNNANGVDLNRNFPDQFDSSSERR 198 (241)
Q Consensus 134 ~~~~~~~ll~~~~v~ivP~~NPDG~~~-~~----------~~~~~~~----~~~~~r~n~~GvDlNRnf~~~w~~~~~~~ 198 (241)
.++.++++|++++|+|+|++||||++. .. +.++.|+ .+..+|.||.|+||||||...
T Consensus 79 ~~~~~~~ll~~~~i~i~P~~NPDG~~r~~~w~~~~~~~~~~~d~~~r~~~~~wp~~R~n~~g~DLNRD~~~~-------- 150 (271)
T cd06238 79 QGDEIEALLDNAVVLIDPMQNPDGRDRFVNWYNSNRGMVPSADPQDREHNEPWPGGRTNHYWFDLNRDWLPL-------- 150 (271)
T ss_pred CCHHHHHHHhcCEEEEEeccCCCHHHHHHHhhhhccCCccccchhhhhcccCCccccccccCcccccccccc--------
Confidence 688899999999999999999999995 22 2222232 234579999999999999753
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhCCCeEEEEecCCC
Q psy17405 199 EQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGKK 233 (241)
Q Consensus 199 ~~~~~~~~sepEt~al~~~~~~~~~~~~idlH~g~ 233 (241)
++||||++.+++.+++|++++|+|+.+
T Consensus 151 --------s~pEtra~~~~~~~~~p~~~~D~H~~g 177 (271)
T cd06238 151 --------TQPESRGRLAAYHEWRPNVVVDFHEMG 177 (271)
T ss_pred --------cCHHHHHHHHHHHhcCCeEEEEeccCC
Confidence 899999999999999999999999955
No 38
>cd06236 M14_AGBL5_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-5, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL5 and the mouse cytosolic carboxypeptidase (CCP)-5. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal
Probab=99.97 E-value=2.3e-31 Score=232.39 Aligned_cols=146 Identities=23% Similarity=0.269 Sum_probs=127.0
Q ss_pred CeEEEEeeeeCCCCeeEEEEEecCCCC--------------------CCCCCCCeEEEEeeecCCCcchHHHHHHHHHHH
Q psy17405 69 KVKLHSIGKSVQNRDLWALQISRNVAS--------------------GRNLLKPMFKYVANIHGDEVVGYELMNYLIEYL 128 (241)
Q Consensus 69 ~v~~~~iG~S~~Gr~i~~~~is~~~~~--------------------~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L 128 (241)
.++..++|+|.+||+|++++|++..+. ....+||+|+|+|++||+||.|+.++++++++|
T Consensus 15 y~~~~~Lg~S~eGR~i~lLtITs~~~~~~~~~~~~~~l~~~~~~~~~~~~~~K~~V~I~ariHp~E~~~s~~~~~ll~~L 94 (304)
T cd06236 15 YYHREVLCYSLEGRRIDLLTITSCHGKLEQREPRLEGLFPDRKTPRPHFFFGKPVVFISSRVHPGETPSSFVFNGFLKFL 94 (304)
T ss_pred EEEEEEeEECCCCCceEEEEEecCcccccccccccccccccccccccccccCCcEEEEECCcCCCCchHHHHHHHHHHHH
Confidence 478899999999999999999985431 013579999999999999999999999999999
Q ss_pred HHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q psy17405 129 IINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLE 208 (241)
Q Consensus 129 ~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~~~~~~~~~~~~se 208 (241)
+. ..++.+..|+++++|+|||++||||+++. ..|.++.|+||||+|.. +.++++
T Consensus 95 l~--~~d~~a~~L~~~~~~~IvPmlNPDGv~~g-----------~~R~~~~G~DLNR~y~~-------------p~~~~~ 148 (304)
T cd06236 95 LN--KDDPRAALLRRRFVFKLIPMLNPDGVYRG-----------HYRTDTRGVNLNRVYLN-------------PDPELH 148 (304)
T ss_pred Hh--CCCHHHHHHHhCCeEEEEEeEcccccccC-----------ccccCCcCCCcCcCCCC-------------CCcccC
Confidence 98 35888999999999999999999999874 25899999999999754 246689
Q ss_pred HHHHHHHHHHHhC----CCeEEEEecCCCcceeccC
Q psy17405 209 PETLAMISFIKNN----PFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 209 pEt~al~~~~~~~----~~~~~idlH~g~~~~~~yp 240 (241)
||+++++++++.+ +++++||+|+++...+.|+
T Consensus 149 Pei~aik~~i~~~~~~~~i~~yiDlH~hs~~~~~F~ 184 (304)
T cd06236 149 PSIYAIKKLILYLHEESRLAFYIDLHAHASKRGCFI 184 (304)
T ss_pred HHHHHHHHHHHHhhccCCceEEEEecccccccceEe
Confidence 9999999999874 5999999999998877553
No 39
>cd06244 Peptidase_M14-like_1_7 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.97 E-value=2.1e-31 Score=228.52 Aligned_cols=133 Identities=32% Similarity=0.338 Sum_probs=116.8
Q ss_pred eeeeCCCCeeEEEEEecCCC-------------------------CCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHH
Q psy17405 75 IGKSVQNRDLWALQISRNVA-------------------------SGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLI 129 (241)
Q Consensus 75 iG~S~~Gr~i~~~~is~~~~-------------------------~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~ 129 (241)
||+|.|||+++++.|+++.. ......|+.|++++++||+|+.|+++++.++++|+
T Consensus 1 iGkS~eGR~l~~~~Is~~~a~ld~~~~~~~~l~l~dp~~~~~~~~~~~~~~~k~v~~~~~iHg~E~~g~~a~l~ll~~L~ 80 (268)
T cd06244 1 AGKSAEGRDIPVVVVAKPEAAVDKYENETLPLMLENPPELADKIEDGTIEDYKPPIINNNIHPDETPGIDAQTELIEELA 80 (268)
T ss_pred CCcCCCCCeeEEEEEeCcHHHHHHHHHHhhhhhhcCcccchhhhccccccccCeEEEEeCcCCCCHHHHHHHHHHHHHHH
Confidence 69999999999999999751 01123577888889999999999999999999999
Q ss_pred HhcCC--------------CHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCC
Q psy17405 130 INDGT--------------DERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSSS 195 (241)
Q Consensus 130 ~~~~~--------------~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~ 195 (241)
..+.. ++.+++||++++|+|+|++||||+++. +|.|++|+||||||...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~i~~lL~~~~i~i~P~~NPDG~~~~------------~R~Na~G~DLNRD~~~~----- 143 (268)
T cd06244 81 QEDEIEFNTTDADGNEVTETLDVDDLLEKVIFLFNVTENPDGRVAG------------TRENANGFDLNRDNSFQ----- 143 (268)
T ss_pred hcccccccccccccccccCCHHHHHHHhcCEEEEEecccCCcceee------------eecCCCccccCCCCCcc-----
Confidence 86422 889999999999999999999999874 79999999999999865
Q ss_pred CCCCCCCCCCCCcHHHHHHHHHHHhCCCeEEEEecCCCcc
Q psy17405 196 ERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGKKPN 235 (241)
Q Consensus 196 ~~~~~~~~~~~sepEt~al~~~~~~~~~~~~idlH~g~~~ 235 (241)
++||||++.+++++++|++++|+|+....
T Consensus 144 -----------sqpEt~av~~~~~~w~P~~~~dlHg~~~~ 172 (268)
T cd06244 144 -----------TQPETQAIVALIAEWNPASFLDLHGYVEG 172 (268)
T ss_pred -----------cCHHHHHHHHHHHHhCCeEEEEeCCCCCc
Confidence 79999999999999999999999976633
No 40
>cd03857 Peptidase_M14-like_1 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The
Probab=99.97 E-value=3.3e-31 Score=224.86 Aligned_cols=127 Identities=32% Similarity=0.444 Sum_probs=114.3
Q ss_pred eeeeCCCCeeEEEEEecCCCC----CCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEEE
Q psy17405 75 IGKSVQNRDLWALQISRNVAS----GRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFII 150 (241)
Q Consensus 75 iG~S~~Gr~i~~~~is~~~~~----~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~iv 150 (241)
||+|.+||||++++|+++.+. ....+||+|+|.+|+||+|+.|+++++.++++|+.. +...+++|++++|+||
T Consensus 1 iG~S~eGRpi~~~~i~~~~~~~~~~~~~~~k~~v~i~~giHg~E~~g~~a~~~l~~~l~~~---~~~~~~ll~~~~i~iv 77 (226)
T cd03857 1 IGKSVEGRPLWMVTLTTAEGMKKRALAKEGKPRVWIDAQIHGNESAGSDALLELLRQLASA---SDEEAKMLENIVIVLI 77 (226)
T ss_pred CccCCCCCeEEEEEEeCCccccccccccCCCcEEEEECCcCCCCchHHHHHHHHHHHHHhC---CHHHHHHHhCCEEEEE
Confidence 699999999999999985431 234578999999999999999999999999999873 3445899999999999
Q ss_pred eccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCCeEEEEec
Q psy17405 151 PSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLH 230 (241)
Q Consensus 151 P~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~~~~~~~~~~~~sepEt~al~~~~~~~~~~~~idlH 230 (241)
|++||||++.. +|.|+.|+||||||+.. ++||++++++++++++|++++|+|
T Consensus 78 P~~NPDG~~~~------------~R~n~~g~DLNRd~~~~----------------~~pEt~~~~~~~~~~~p~~~iDlH 129 (226)
T cd03857 78 PRANPDGAALF------------TRENANGLDLNRDFLKL----------------TQPETRAVREVFIEWKPQFFIDLH 129 (226)
T ss_pred eccCCChHHhc------------cccCCCcccCCCCCCCc----------------CCHHHHHHHHHHHHcCCeEEEEcC
Confidence 99999999884 79999999999999975 699999999999999999999999
Q ss_pred CC
Q psy17405 231 GK 232 (241)
Q Consensus 231 ~g 232 (241)
++
T Consensus 130 ~~ 131 (226)
T cd03857 130 EY 131 (226)
T ss_pred CC
Confidence 99
No 41
>cd06907 M14_AGBL2-3_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-2, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subgroup includes the human AGBL-2, and -3, and the mouse cytosolic carboxypeptidase (CCPs)-2, and -3. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N
Probab=99.97 E-value=1.7e-30 Score=222.57 Aligned_cols=147 Identities=23% Similarity=0.316 Sum_probs=126.0
Q ss_pred CCCeEEEEeeeeCCCCeeEEEEEecCCC-CCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCc
Q psy17405 67 PSKVKLHSIGKSVQNRDLWALQISRNVA-SGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTT 145 (241)
Q Consensus 67 p~~v~~~~iG~S~~Gr~i~~~~is~~~~-~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~ 145 (241)
++.++..++|+|++||+|++++|++... .....+||+|+|+|++|++|+.|+.++..+++.|+. +++.++.|++++
T Consensus 11 ~~~~~~~~lg~S~eGR~i~~LtIt~~~~~~~~~~~K~~I~I~ariHp~E~~~s~~~~gll~~L~~---~~~~a~~Lr~~~ 87 (261)
T cd06907 11 SKFCKLRVLCRTLAGNTVYLLTITSPSSNPSLAAAKKAVVLTARVHPGETNASWMMKGFLDFLTS---NSPDAQLLRDTF 87 (261)
T ss_pred CCceEEEEEEECCCCCeeeEEEEcCCCccccccCCCCEEEEECCcCCChHHHHHHHHHHHHHHhc---CCHHHHHHHhcC
Confidence 4578999999999999999999997532 123457999999999999999999999999999985 578999999999
Q ss_pred eEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHh----C
Q psy17405 146 DIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKN----N 221 (241)
Q Consensus 146 ~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~~~~~~~~~~~~sepEt~al~~~~~~----~ 221 (241)
+|+|||++||||+.+. ..|.++.|+||||||...| +...||+.++++++++ .
T Consensus 88 ~f~IvPmlNPDGv~~G-----------~~R~~~~G~DLNR~w~~p~-------------~~~~P~i~~~k~li~~l~~~~ 143 (261)
T cd06907 88 IFKIVPMLNPDGVIVG-----------NYRCSLAGRDLNRNYKTPL-------------KDSFPTIWYTKNMVKRLLEER 143 (261)
T ss_pred CEEEEEeecCcccccc-----------CCcCCCcCCCCCcCCCCCC-------------cccCchHHHHHHHHHHHHhcC
Confidence 9999999999999874 2689999999999998754 3368998888887655 4
Q ss_pred CCeEEEEecCCCcceeccC
Q psy17405 222 PFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 222 ~~~~~idlH~g~~~~~~yp 240 (241)
++++++|+||++...+.||
T Consensus 144 ~i~~ylDlHghs~~~~~F~ 162 (261)
T cd06907 144 EVILYCDLHGHSRKNNVFM 162 (261)
T ss_pred CeEEEEEeccchhccceEe
Confidence 7999999999998877665
No 42
>PRK10602 murein peptide amidase A; Provisional
Probab=99.97 E-value=5.6e-31 Score=223.53 Aligned_cols=133 Identities=26% Similarity=0.302 Sum_probs=114.7
Q ss_pred eEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEE
Q psy17405 70 VKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFI 149 (241)
Q Consensus 70 v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~i 149 (241)
+...++|+|++||||++++++.. .|+.++|+||+||+|++|++++++++++|... +..+.|
T Consensus 15 ~~~~~iG~S~egrpi~~l~~~~~-------~~~~vli~agiHG~E~~g~~~~~~l~~~l~~~------------~~~~~i 75 (237)
T PRK10602 15 PGTEHYGRSLLGAPLLWFPAPAA-------SRESGLILAGTHGDETASVVTLSCALRTLTPS------------LRRHHV 75 (237)
T ss_pred ccccccccccCCCceEEEEcCCC-------CCceEEEEecCCCCcHHHHHHHHHHHHhhhhh------------ccceEE
Confidence 47789999999999999998753 26899999999999999999999999998753 235789
Q ss_pred EeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCC-CCCCCC---------CC---CCCCCCCCCCcHHHHHHHH
Q psy17405 150 IPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPD-QFDSSS---------ER---REQPLNVKKLEPETLAMIS 216 (241)
Q Consensus 150 vP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~-~w~~~~---------~~---~~~~~~~~~sepEt~al~~ 216 (241)
||++||||+++. .|.||+|+|||||||. .|...+ .+ ..|+|..|+|||||+++++
T Consensus 76 ipvvNPDG~~~~------------~R~n~~GvDLNRnFp~~~w~~~~~~~~w~~~~~~~~~~~y~G~~p~SepEt~al~~ 143 (237)
T PRK10602 76 VLAVNPDGCQLG------------LRANANGVDLNRNFPAANWKEGETVYRWNSAAEERDVVLLTGDKPGSEPETQALCQ 143 (237)
T ss_pred EEEECccccccc------------cccCCCCCchhhcCCCcccccccccccccCCCCccchhhccCCCCCCCHHHHHHHH
Confidence 999999999885 6889999999999997 675432 22 2588999999999999999
Q ss_pred HHHhCCCeEEEEecCCC
Q psy17405 217 FIKNNPFVLSGNLHGKK 233 (241)
Q Consensus 217 ~~~~~~~~~~idlH~g~ 233 (241)
++.++++.+++++|+..
T Consensus 144 ~i~~~~~~~~~s~HsP~ 160 (237)
T PRK10602 144 LIHRLQPAWVVSFHDPL 160 (237)
T ss_pred HHHHcCCCEEEEeeccc
Confidence 99999999999999953
No 43
>cd06240 Peptidase_M14-like_1_3 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. T
Probab=99.97 E-value=6.6e-30 Score=221.02 Aligned_cols=147 Identities=21% Similarity=0.150 Sum_probs=121.1
Q ss_pred EEEEeeeeCCCCeeEEEEEecCCCC--------------------------CCCCCCCeEEEEeeecCCCcchHHHHHHH
Q psy17405 71 KLHSIGKSVQNRDLWALQISRNVAS--------------------------GRNLLKPMFKYVANIHGDEVVGYELMNYL 124 (241)
Q Consensus 71 ~~~~iG~S~~Gr~i~~~~is~~~~~--------------------------~~~~~kp~v~i~agiHg~E~~g~~~~~~l 124 (241)
++.++|+|.|||+|+++.|++..+. .....||+|+|.+++||+|++|+++++++
T Consensus 1 ~l~~iGkS~EGR~l~~~~Iss~~n~~~ld~~~~~~~~la~~~~~~~~~a~~~~~~~kp~v~i~~~iHg~E~~g~ea~l~l 80 (273)
T cd06240 1 KLVEIGKTEEGRPQIMAAISSPENLAKLDHYKAILRKLADPRGLTEEQARALIAEGKPIVWIDGGLHSTETGGPQMLMEL 80 (273)
T ss_pred CeeEeecCCCCCeEEEEEeeChhHhhhHHHHHHHHhhhhccccccchhhhhhhccCCCEEEEECCcCCCchHHHHHHHHH
Confidence 4678999999999999999975430 12356999999999999999999999999
Q ss_pred HHHHHHhcCCCHHHHHhhcCceEEEEeccCccccccccc-CCCCC-C------CCCCCCCCCCccCCCCCCCCCCCCCCC
Q psy17405 125 IEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKE-GSCNS-L------ASFVGRNNANGVDLNRNFPDQFDSSSE 196 (241)
Q Consensus 125 ~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~-~~~~~-~------~~~~~r~n~~GvDlNRnf~~~w~~~~~ 196 (241)
+++|+. +.|+.++++|++++|+|+|++||||++..-. .++.. . .....+.+..|+||||||-..
T Consensus 81 ~~~L~~--~~d~~~~~lLd~~~i~i~P~~NPDG~er~~~w~~~~~~~~~~~~~~~~~~~~~y~g~DlNRD~~~~------ 152 (273)
T cd06240 81 AYRLAT--EEDPEIKRILDNVIVLIVPVANPDGRDRVVDWYMRTLGPPKRDRSPLPPLYGKYVGHDNNRDGYMN------ 152 (273)
T ss_pred HHHHHh--cCCHHHHHHHhcCEEEEEeCcCCCHHHHhhhhhhhccCCcccCCCCcccccCccCCcCCCcccchh------
Confidence 999998 4789999999999999999999999997421 01100 0 111225677899999999774
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHhCCCeEEEEecCCCcc
Q psy17405 197 RREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGKKPN 235 (241)
Q Consensus 197 ~~~~~~~~~~sepEt~al~~~~~~~~~~~~idlH~g~~~ 235 (241)
+.||+|++.+++.+|.|++++|+|..+..
T Consensus 153 ----------~~~et~~~~~~~~~w~P~v~~D~He~g~~ 181 (273)
T cd06240 153 ----------QQETTNNSRKLFLEWHPQIMYDLHQSGPA 181 (273)
T ss_pred ----------cCHHHHHHHHHHHhcCCcEEEEcccCCCC
Confidence 69999999999999999999999976544
No 44
>cd06904 M14_MpaA_like Peptidase M14-like domain of Escherichia coli Murein Peptide Amidase A (MpaA) and related proteins. MpaA is a member of the M14 family of metallocarboxypeptidases (MCPs), however it has an exceptional type of activity, it hydrolyzes the gamma-D-glutamyl-meso-diaminopimelic acid (gamma-D-Glu-Dap) bond in murein peptides. MpaA is specific for cleavage of the gamma-D-Glu-Dap bond of free murein tripeptide; it may also cleave murein tetrapeptide. MpaA has a different substrate specificity and cellular role than endopeptidase I, ENP1 (ENP1 does not belong to this group). MpaA works on free murein peptide in the recycling pathway.
Probab=99.95 E-value=4.8e-28 Score=198.45 Aligned_cols=111 Identities=32% Similarity=0.414 Sum_probs=99.2
Q ss_pred EEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCC
Q psy17405 104 FKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDL 183 (241)
Q Consensus 104 v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDl 183 (241)
|+|+||+||+|+.|+.++++++++|+.. .|++.+|+|||++||||+++. +|.|+.|+||
T Consensus 1 vli~agiHG~E~~g~~~~~~l~~~l~~~---------~l~~~~i~ivP~~NPdG~~~~------------~R~n~~gvDL 59 (178)
T cd06904 1 VLIIGGIHGDEPASVSDLEELLRILPGL---------ILRGLSWYVIPVLNPDGLLRA------------TRCNANGVDL 59 (178)
T ss_pred CEEEeccCCCCHHHHHHHHHHHHHHHHH---------hhcCCeEEEEeCcCccHHhhC------------cccCCCCcCh
Confidence 6899999999999999999999999873 277899999999999999884 7888999999
Q ss_pred CCCCCCCCCCCCC--CCCCCCCCCCCcHHHHHHHHHHHhCCCeEEEEecCCCcc
Q psy17405 184 NRNFPDQFDSSSE--RREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGKKPN 235 (241)
Q Consensus 184 NRnf~~~w~~~~~--~~~~~~~~~~sepEt~al~~~~~~~~~~~~idlH~g~~~ 235 (241)
|||||..|...+. ...|+|+.++|||||+++.+++++.+++++||+|++...
T Consensus 60 NRnFp~~~~~~~~~~~~~~~G~~~~sepEt~al~~~~~~~~~~~~idlHs~~~~ 113 (178)
T cd06904 60 NRNFPTKDWPPGASRYRRYPGPKPGSEPESRALMDLIERFKPDVVVSFHAPLGV 113 (178)
T ss_pred hhcCCccccccCCCcccccCCCCCCCCHHHHHHHHHHHhcCCeEEEEeCCCCCe
Confidence 9999999875532 246888889999999999999999999999999998754
No 45
>cd06906 M14_Nna1 Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the mouse Nna1/CCP-1, and -4 proteins, and the human Nna1/AGTPBP-1 protein. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. Mutations in Nna
Probab=99.95 E-value=8.7e-27 Score=200.58 Aligned_cols=154 Identities=21% Similarity=0.276 Sum_probs=123.5
Q ss_pred HHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCC------CCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHHHhc
Q psy17405 59 LVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVAS------GRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIIND 132 (241)
Q Consensus 59 l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~------~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~ 132 (241)
|+......+..++...+|+|.+||+++++.|++.+.. .....||.|+|+|++|++|..|++++..+++.|+.
T Consensus 4 l~~~~~~~~~y~~~~~Lc~Tl~G~~v~lltIt~~~~~~~~~~~~~~~~kp~I~I~ARvHPgEt~~Swi~~g~l~~L~~-- 81 (278)
T cd06906 4 LESLHDPQQIYFRQQVLCETLGGNSCPLLTITAMPESNYYEHICQFRNRPYIFLSARVHPGETNASWVMKGTLEFLMS-- 81 (278)
T ss_pred HhhhcCCcccEEeeecceeccCCCceeEEEEeCCCccccccccccccCCcEEEEEcccCCCcchHHHHHHHHHHHHhC--
Confidence 3444444455789999999999999999999985431 11247999999999999999999999999998875
Q ss_pred CCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCcHH--
Q psy17405 133 GTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPE-- 210 (241)
Q Consensus 133 ~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~~~~~~~~~~~~sepE-- 210 (241)
+|+.++.|+++++|+|||++||||+.+. ..|.|..|+||||||... .+...||
T Consensus 82 -~d~~a~~Lr~~~~f~IvPmlNPDGvv~G-----------n~Rc~~~G~DLNR~w~~p-------------~~~~~P~i~ 136 (278)
T cd06906 82 -SSPTAQSLRESYIFKIVPMLNPDGVING-----------NHRCSLSGEDLNRQWQSP-------------NPELHPTIY 136 (278)
T ss_pred -CCHHHHHHHHhCcEEEEeeecCccceec-----------ccccCCCCCCCCCCCCCC-------------CcccChHHH
Confidence 5899999999999999999999999874 267888999999998742 1224565
Q ss_pred -HHHHHHHHHhC--CCeEEEEecCCCcceecc
Q psy17405 211 -TLAMISFIKNN--PFVLSGNLHGKKPNKVKF 239 (241)
Q Consensus 211 -t~al~~~~~~~--~~~~~idlH~g~~~~~~y 239 (241)
+|+|.+++.+. .+.+++|+|+++...+.|
T Consensus 137 ~~k~l~~~l~~~~~~~~~yiDlHghs~~~~~F 168 (278)
T cd06906 137 HTKGLLQYLAAIKRSPLVYCDYHGHSRKKNVF 168 (278)
T ss_pred HHHHHHHHHHHhCCCceEEEeecccccccceE
Confidence 56666777653 577999999999876544
No 46
>cd06231 Peptidase_M14-like_4 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=99.94 E-value=2.9e-26 Score=195.21 Aligned_cols=125 Identities=26% Similarity=0.389 Sum_probs=110.1
Q ss_pred CeEEEEeeeeCC-CCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceE
Q psy17405 69 KVKLHSIGKSVQ-NRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDI 147 (241)
Q Consensus 69 ~v~~~~iG~S~~-Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v 147 (241)
.+++..+|+... ++||+++++.+.. ++||+|+|+||+||+|+.|+.++++|++++.. .++++++|
T Consensus 14 ~~~~~~~g~~~~~~~pL~~l~~~~~~-----~~~p~vlI~gGiHG~E~~G~~a~l~~l~~l~~---------~~l~~~~i 79 (236)
T cd06231 14 RLDVREYGQLAYQSYPLYALKSRGWD-----SDLPRVLITAGIHGDEPAGPLGALEFLRAAAL---------ELAQDVNL 79 (236)
T ss_pred ceEEEEccccccCCeeEEEEEcCCCC-----CCCCEEEEECCCCCCcHHHHHHHHHHHHHHHH---------HHhcCCeE
Confidence 368888897766 9999999997532 36899999999999999999999999999875 36889999
Q ss_pred EEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC--CCeE
Q psy17405 148 FIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN--PFVL 225 (241)
Q Consensus 148 ~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~~~~~~~~~~~~sepEt~al~~~~~~~--~~~~ 225 (241)
+|+|++||||++.. .|.|+.|+||||||+.. .++||++++++++.+. ++++
T Consensus 80 ~ivP~vNPdG~~~~------------~R~n~~g~DLNR~F~~~---------------~~~~E~~al~~~~~~~~~~~~~ 132 (236)
T cd06231 80 SVYPCINPSGFEAI------------TRWNRNGIDPNRSFRSE---------------SPSPEVRLLMEWLRRLGAAFDL 132 (236)
T ss_pred EEEECcChhHHhcC------------ccCCCCCccccCCCCCC---------------CCCHHHHHHHHHHHHhCCCcEE
Confidence 99999999999874 78899999999999862 2689999999999998 8999
Q ss_pred EEEecCCCc
Q psy17405 226 SGNLHGKKP 234 (241)
Q Consensus 226 ~idlH~g~~ 234 (241)
++|||++..
T Consensus 133 ~IDLH~~~~ 141 (236)
T cd06231 133 HIDLHEDTE 141 (236)
T ss_pred EEEeCCCCC
Confidence 999999883
No 47
>cd00596 Peptidase_M14_like The M14 family of metallocarboxypeptidases (MCPs) are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring
Probab=99.94 E-value=1.3e-26 Score=192.40 Aligned_cols=112 Identities=41% Similarity=0.641 Sum_probs=99.5
Q ss_pred EEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCC
Q psy17405 104 FKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDL 183 (241)
Q Consensus 104 v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDl 183 (241)
|+|+||+||+|+.|++++++++++|+..+... +.++++.+|+|||++||||+++. .+|.|..|+||
T Consensus 1 v~i~ag~Hg~E~~g~~~~~~~~~~l~~~~~~~---~~l~~~~~i~iiP~~NPdG~~~~-----------~~R~n~~g~Dl 66 (196)
T cd00596 1 VLIIAGIHGNETIGVEAALALLRRLLSNYGRD---TKLLENGRLLVVPVLNPDGYEAV-----------NWRKNANGVDL 66 (196)
T ss_pred CEEECCcCCCcHHHHHHHHHHHHHHHHcCcch---HHHHhCCeEEEEeCcccccceee-----------eEEeCCCCcCc
Confidence 68999999999999999999999999865332 88999999999999999999882 16888899999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCCeEEEEecCCCcceeccC
Q psy17405 184 NRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGKKPNKVKFP 240 (241)
Q Consensus 184 NRnf~~~w~~~~~~~~~~~~~~~sepEt~al~~~~~~~~~~~~idlH~g~~~~~~yp 240 (241)
|||||..|+. .++++||++++.+++.++++++++|+|+++.. ++||
T Consensus 67 NR~f~~~~~~----------~~~~~~e~~~~~~~~~~~~~~~~idlH~~~~~-~~~p 112 (196)
T cd00596 67 NRNFPGLWGK----------GPLSEPETRALAELIQQRKVDLYIDLHSGSLG-VLYP 112 (196)
T ss_pred cCCCCCcccC----------CCCCcHHHHHHHHHHHhCCceEEEEEecCCce-EEec
Confidence 9999998853 25589999999999999999999999999854 7777
No 48
>cd06232 Peptidase_M14-like_5 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The
Probab=99.93 E-value=1.9e-25 Score=186.50 Aligned_cols=138 Identities=27% Similarity=0.253 Sum_probs=114.6
Q ss_pred CCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHH
Q psy17405 50 LSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLI 129 (241)
Q Consensus 50 ~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~ 129 (241)
.++.+|...+.+| |.+ .+ --+|+|||+|++++|+ + +||+|+|+||+||+||+|+.++++|+++|+
T Consensus 2 ~~~~~i~~~l~~~----~g~-~~--~a~S~EGR~I~~l~i~--~------~Kp~I~I~gGvHarEwig~~~al~fi~~L~ 66 (240)
T cd06232 2 LSAGQIAYELAVL----PGI-EF--AARSRQGRPVTGRYVA--G------LDHPVVISAGQHANETSGVVGALRAAEALA 66 (240)
T ss_pred CCHHHHHHHHhhc----CCc-cc--cccccCCCeeeEEEec--C------CCcEEEEeCCcCCCcchhHHHHHHHHHHHh
Confidence 3677888777777 442 22 3589999999999993 2 379999999999999999999999999998
Q ss_pred HhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCC---CCCCCCccCCC-CCCCCCCCCCCCCCCCCCCCC
Q psy17405 130 INDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFV---GRNNANGVDLN-RNFPDQFDSSSERREQPLNVK 205 (241)
Q Consensus 130 ~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~---~r~n~~GvDlN-Rnf~~~w~~~~~~~~~~~~~~ 205 (241)
+ +++++|+|+|++|||||++. ...+.|+++.+ .|.|+.|.|+| |+++.
T Consensus 67 ~-----------~~~~n~~I~P~vNPDGYe~~-~~L~r~nP~~~hHaaR~~A~g~D~~fr~~~~---------------- 118 (240)
T cd06232 67 A-----------RPGAHFALIPLENPDGYALH-ERLRAEHPRHMHHAARYTALGDDLEYREFPP---------------- 118 (240)
T ss_pred c-----------cCCceEEEEEeeCCcHHHhh-chhhccCcccccchhhhcccCCCcccccCCc----------------
Confidence 6 56899999999999999983 33344554422 38999999999 98865
Q ss_pred CCcHHHHHHHHHHHhCCCeEEEEecCC
Q psy17405 206 KLEPETLAMISFIKNNPFVLSGNLHGK 232 (241)
Q Consensus 206 ~sepEt~al~~~~~~~~~~~~idlH~g 232 (241)
..|++++++++.++.++++||+|+.
T Consensus 119 --~~Es~~~~~~~~~~~~~~hiDlHey 143 (240)
T cd06232 119 --FGEREARHQALAKSGAQLHVNLHGY 143 (240)
T ss_pred --chHHHHHHHHHHhhCCcEEEECCCC
Confidence 5899999999999999999999985
No 49
>cd06233 Peptidase_M14-like_6 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The
Probab=99.75 E-value=2.6e-17 Score=142.96 Aligned_cols=160 Identities=20% Similarity=0.211 Sum_probs=117.2
Q ss_pred CCHHHHHHHHHHHHHhCCCCeEEEEe---eeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCC-cchHHHHHHHH
Q psy17405 50 LSFDELTKFLVAAAQQNPSKVKLHSI---GKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDE-VVGYELMNYLI 125 (241)
Q Consensus 50 ~ty~ei~~~l~~la~~~p~~v~~~~i---G~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E-~~g~~~~~~l~ 125 (241)
.+|+|..+.+.+-+++-...++...+ |..-+--+|+++.++.... .|+++|++|+||.| .+|+.+++.++
T Consensus 3 ~sY~eAR~kFl~aA~~aga~~~~~~~~~~gp~g~~l~i~v~~~g~~~~------~~~l~i~sGvHG~Eg~~Gs~~~~~ll 76 (283)
T cd06233 3 QSYAEAREKFLAAAKAAGAALESYVHPLLGPDGEALAIDVARLGPADA------KRLLVITSGTHGVEGFCGSAIQLALL 76 (283)
T ss_pred ccHHHHHHHHHHHHHHcCccceeeeccCCCCCCceeeeeEEEEcCCCC------CcEEEEEecccCCcccchHHHHHHHH
Confidence 47899999999988875544444443 3322334688888886443 56999999999999 79999999999
Q ss_pred HHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCC----------
Q psy17405 126 EYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSSS---------- 195 (241)
Q Consensus 126 ~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~---------- 195 (241)
+++.. ..+..++.|++||++||+|+... .|.|.+||||||||-.......
T Consensus 77 ~~~~~--------~~~~~~~~vi~vh~vNP~Gf~~~------------~R~nedgvDLNRnf~d~~~~~p~N~~Y~~~~~ 136 (283)
T cd06233 77 RELLP--------RSLPAGVAVLLVHALNPYGFAHL------------RRVNENNVDLNRNFLDFSAPLPENPGYAELHP 136 (283)
T ss_pred Hhcch--------hhccCCceEEEEeCcCHHHHhhc------------ccCCCCCCChhhcccccCCCCCCCccHHHHhh
Confidence 99875 34566889999999999999874 7889999999999944322110
Q ss_pred ----------------------------------CCCCCCCC------CCCCcHHHHHHHHHHHhC----CCeEEEEecC
Q psy17405 196 ----------------------------------ERREQPLN------VKKLEPETLAMISFIKNN----PFVLSGNLHG 231 (241)
Q Consensus 196 ----------------------------------~~~~~~~~------~~~sepEt~al~~~~~~~----~~~~~idlH~ 231 (241)
..|.|..+ ....+.-++.|+++++++ .-.++||+|+
T Consensus 137 ~l~p~~~~~~~~~~~~~l~~~~~~~G~~a~~~A~~~GQY~~P~GlfyGG~~p~wS~~~L~~il~~~~~~~~~v~~iD~HT 216 (283)
T cd06233 137 LLLPPRWPPAAAAFAAKLLAYILKHGEKALKQALSGGQYTHPDGLFYGGTAPQWSNRTLREILRRHLAGAERVAWIDVHT 216 (283)
T ss_pred hhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCccccCCCCccHHHHHHHHHHHHhcccccEEEEEEeCC
Confidence 01111111 123677788899998885 6778999999
Q ss_pred CCcc
Q psy17405 232 KKPN 235 (241)
Q Consensus 232 g~~~ 235 (241)
|-..
T Consensus 217 GlGp 220 (283)
T cd06233 217 GLGP 220 (283)
T ss_pred CCCC
Confidence 8654
No 50
>KOG3641|consensus
Probab=99.70 E-value=6.9e-17 Score=147.96 Aligned_cols=166 Identities=19% Similarity=0.223 Sum_probs=138.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhCCC--CeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHH
Q psy17405 42 PFLENPHYLSFDELTKFLVAAAQQNPS--KVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYE 119 (241)
Q Consensus 42 ~~~~~~~y~ty~ei~~~l~~la~~~p~--~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~ 119 (241)
-++.+...+||.++.-+++.|+...+. ..+..+++.|..||++.++.|.. .....+|+|+++|.+|.+|.-+++
T Consensus 372 cyfaYhypyTy~~l~~hLn~les~~~~~~yfr~dVl~~tl~g~~~~l~tI~~----ae~~~~~~IfLSaRVHpgeTnsSw 447 (650)
T KOG3641|consen 372 CYFAYHYPYTYSQLQCHLNGLESPKNPAFYFRYDVLLFTLVGRAMALATIDM----AECAPRPVIFLSARVHPGETNSSW 447 (650)
T ss_pred EEEeeccCccHHHHHhhhhcccCCCCcCcccchheeeeeecCCccceEEeeH----hhcCCcceEEEecccCCCCCcHHH
Confidence 345677789999999999999887652 46888999999999999999993 223458999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCC
Q psy17405 120 LMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQFDSSSERRE 199 (241)
Q Consensus 120 ~~~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~~~~~ 199 (241)
++..+++.|+. .++.+..|++.+.|.|+||+||||.-.. ..|....|.||||-|...
T Consensus 448 vmkGilefl~s---~~p~aq~LRe~~vFKI~PMLNPDGV~~G-----------nyRCSL~G~DLNR~w~tp--------- 504 (650)
T KOG3641|consen 448 VMKGILEFLVS---NSPLAQGLRESYVFKIVPMLNPDGVIVG-----------NYRCSLMGLDLNRMWSTP--------- 504 (650)
T ss_pred HHHHHHHHhhc---CCcHHHhhhhheeEecccccCCCceecc-----------cceeccccchhhhhcCCC---------
Confidence 99999999996 4677788999999999999999999663 258888999999999763
Q ss_pred CCCCCCCCcHHHHHHHHHHHhC------CCeEEEEecCCCcceec
Q psy17405 200 QPLNVKKLEPETLAMISFIKNN------PFVLSGNLHGKKPNKVK 238 (241)
Q Consensus 200 ~~~~~~~sepEt~al~~~~~~~------~~~~~idlH~g~~~~~~ 238 (241)
.+.+-|+..+.++++++. +|.+++|+|++++..+.
T Consensus 505 ----s~~shPsi~~~k~li~~l~~~~~~~p~~Y~DlHgHSqK~n~ 545 (650)
T KOG3641|consen 505 ----SPASHPSIYAVKQLIQQLSNVPHSRPLGYVDLHGHSQKVNH 545 (650)
T ss_pred ----CcccchhHHhHHHHHhhhhcccccCceEeecccccccccce
Confidence 234678888888888773 48899999999977543
No 51
>cd06251 M14_ASTE_ASPA_like_1 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.60 E-value=3.9e-15 Score=130.76 Aligned_cols=109 Identities=23% Similarity=0.261 Sum_probs=80.1
Q ss_pred eEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEEEeccCccccccccc
Q psy17405 84 LWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKE 163 (241)
Q Consensus 84 i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~ 163 (241)
|+++.+..... .|+|+|+||+||||+.|..++..+++++.... -+-+++++|++||.|++..
T Consensus 9 ~pv~~~~g~~~------gp~v~i~~giHGdE~~G~~~~~~l~~~l~~~~----------~~g~v~~vp~~Np~a~~~~-- 70 (287)
T cd06251 9 IPVHVIRGKKP------GPTLLLTAAIHGDELNGVEIIRRLLRQLDPKT----------LRGTVIAVPVVNVFGFLNQ-- 70 (287)
T ss_pred eeEEEEeCCCC------CCEEEEEcCccCCchhHHHHHHHHHhcCCccc----------CceEEEEEeCCCHHHHHhc--
Confidence 56677765322 48999999999999999999999988874311 1347889999999999874
Q ss_pred CCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC--CCeEEEEecCCCc
Q psy17405 164 GSCNSLASFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN--PFVLSGNLHGKKP 234 (241)
Q Consensus 164 ~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~~~~~~~~~~~~sepEt~al~~~~~~~--~~~~~idlH~g~~ 234 (241)
.|.+..|.||||+||.... .++|.+.-..+++.. .++++||||+++.
T Consensus 71 ----------~R~~~d~~dlNR~fpg~~~--------------g~~~~~~a~~i~~~~~~~~d~~iDlHs~~~ 119 (287)
T cd06251 71 ----------SRYLPDRRDLNRSFPGSKN--------------GSLASRIAHLFFTEILSHADYGIDLHTGAI 119 (287)
T ss_pred ----------cccCCCccCHhhcCCCCCC--------------CCHHHHHHHHHHHHHHhhCCEEEEcCCCCC
Confidence 5777789999999996531 133433333443433 3899999999974
No 52
>cd06250 M14_PaAOTO_like An uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the the M14 family of metallocarboxypeptidases. This subgroup includes Pseudomonas aeruginosa AotO and related proteins. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD. The gene encoding
Probab=99.60 E-value=6.5e-15 Score=132.93 Aligned_cols=99 Identities=29% Similarity=0.464 Sum_probs=72.6
Q ss_pred EeeeeCCC--CeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEEEe
Q psy17405 74 SIGKSVQN--RDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIP 151 (241)
Q Consensus 74 ~iG~S~~G--r~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP 151 (241)
.++++..| +.|+++++..... .|+|+|+||+||+|+.|..++.+++++|...... ..+ +-+|++||
T Consensus 4 ~~~~~~~g~~~~ipv~~~~g~~~------gp~v~i~agiHGdE~~G~~~~~~L~~~l~~~~~~-----~~l-~G~v~ivP 71 (359)
T cd06250 4 PLPSPAPGTERELTVFRFGGAGA------GPKVYIQASLHADELPGMLVLHHLIELLKKLEAE-----GRI-LGEITLVP 71 (359)
T ss_pred ecccCCCCCeEEEEEEEEeCCCC------CCEEEEEeccccCchHHHHHHHHHHHHHhhhccc-----ccc-CceEEEEe
Confidence 34555555 5688888875321 5899999999999999999999999999874211 113 44799999
Q ss_pred ccCcccccccccCCCCCCCCCCCCCC-CCccCCCCCCCCC
Q psy17405 152 SLNPDGYSAAKEGSCNSLASFVGRNN-ANGVDLNRNFPDQ 190 (241)
Q Consensus 152 ~~NPDG~~~~~~~~~~~~~~~~~r~n-~~GvDlNRnf~~~ 190 (241)
++||+|++...... ..+|.+ ..|.||||.||..
T Consensus 72 ~~Np~g~~~~~~~~------~~~R~~p~dg~dlNR~FPg~ 105 (359)
T cd06250 72 VANPIGLNQRLGGF------HLGRFDLASGTNFNRDFPDL 105 (359)
T ss_pred CcChHHHHhhcccc------ccccccCCCCCccCcCCCCc
Confidence 99999997632111 124444 5899999999985
No 53
>cd06255 M14_ASTE_ASPA_like_5 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.59 E-value=9.8e-15 Score=128.53 Aligned_cols=120 Identities=20% Similarity=0.237 Sum_probs=85.3
Q ss_pred eeeCCCCe--eEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEEEecc
Q psy17405 76 GKSVQNRD--LWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSL 153 (241)
Q Consensus 76 G~S~~Gr~--i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~~ 153 (241)
++...|.+ |+++.+..... .|+++|+||+||+|..|..++..++++|... .+ +-++++||++
T Consensus 3 ~~~~~g~~~~~pv~~~~g~~~------gp~v~i~agvHG~E~~G~~~~~~l~~~l~~~---------~~-~g~~~~vp~~ 66 (293)
T cd06255 3 GTMADGSAVALPVTILRGAEP------GPTLWLHAQVHGNEYNGTQAIVDLYRSLDPA---------AL-KGRLVALPTA 66 (293)
T ss_pred ccCCCCCccceeEEEEeCCCC------CCEEEEEcccCCCcHHHHHHHHHHHHhCCHh---------hc-CCeEEEEeCc
Confidence 44555654 67777765322 4899999999999999999999999987531 12 3478899999
Q ss_pred CcccccccccCCCCCCCCCCCCCCC-CccCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCCeEEEEecCC
Q psy17405 154 NPDGYSAAKEGSCNSLASFVGRNNA-NGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGK 232 (241)
Q Consensus 154 NPDG~~~~~~~~~~~~~~~~~r~n~-~GvDlNRnf~~~w~~~~~~~~~~~~~~~sepEt~al~~~~~~~~~~~~idlH~g 232 (241)
||+|++.. .|.++ .+.||||.||..-+ + ..++..+.++.+.+. -..+++||||++
T Consensus 67 N~~a~~~~------------~R~~p~d~~dlNR~fpg~~~---------g--~~~~r~A~~~~~~~~-~~~d~~iDlHs~ 122 (293)
T cd06255 67 NPTALDAR------------TRMSPFDELDLNRTFPGNPN---------G--MVTQQMAHALFEEVR-GVADYLVDLHTM 122 (293)
T ss_pred CHHHHHhh------------cccCCCCCCCcccCCCCCCC---------C--CHHHHHHHHHHHHHH-hcCCEEEECCCC
Confidence 99999874 57775 89999999986310 1 112333444433332 257999999999
Q ss_pred Ccc
Q psy17405 233 KPN 235 (241)
Q Consensus 233 ~~~ 235 (241)
+..
T Consensus 123 ~~~ 125 (293)
T cd06255 123 TTI 125 (293)
T ss_pred CCC
Confidence 875
No 54
>cd06254 M14_ASTE_ASPA_like_4 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.58 E-value=8.1e-15 Score=128.79 Aligned_cols=111 Identities=23% Similarity=0.282 Sum_probs=82.3
Q ss_pred CeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEEEeccCccccccc
Q psy17405 82 RDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAA 161 (241)
Q Consensus 82 r~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~ 161 (241)
-.|++.++..... .|+|+|+||+||||+.|..++..+++++-.. . -+.+++++|++||.|++..
T Consensus 4 ~~~pv~~~~g~~~------gp~v~i~agvHG~E~~G~~~~~~l~~~l~~~--------~--~~g~v~~vp~~N~~a~~~~ 67 (288)
T cd06254 4 LAIPVTLINGVNP------GPTLAITAGVHGGEYPGIQALQKLAREIDPA--------K--LSGTLIIVHVLNLSGFYAR 67 (288)
T ss_pred ccccEEEEeCCCC------CCEEEEEecccCCchhHHHHHHHHHHhCCcc--------c--CeEEEEEEeCcCHHHHHhc
Confidence 4566777765432 4899999999999999999999999887431 1 2567999999999999763
Q ss_pred ccCCCCCCCCCCCC--CCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC---CCeEEEEecCCCcc
Q psy17405 162 KEGSCNSLASFVGR--NNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN---PFVLSGNLHGKKPN 235 (241)
Q Consensus 162 ~~~~~~~~~~~~~r--~n~~GvDlNRnf~~~w~~~~~~~~~~~~~~~sepEt~al~~~~~~~---~~~~~idlH~g~~~ 235 (241)
.| ....|.||||.||...+. .+++.++..+.+. ..+++||||+++..
T Consensus 68 ------------~r~~~~~d~~dlNR~fpg~~~g---------------~~~~r~a~~~~~~~~~~~d~~iDlHs~~~~ 119 (288)
T cd06254 68 ------------TPYIVPEDGKNLNRVFPGDKDG---------------TLTERIAYFLTEEVIDKADFLIDLHSGDGN 119 (288)
T ss_pred ------------CcccCCCCCCchhhcCCCCCCC---------------CHHHHHHHHHHHHHHhhCcEEEECCCCCCc
Confidence 23 245889999999986421 2355555555442 68999999999754
No 55
>cd06230 M14_ASTE_ASPA_like The Peptidase M14 Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily belongs to the M14 family of metallocarboxypeptidases (MCPs), and includes ASTE, which catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) which cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.55 E-value=1.5e-14 Score=124.72 Aligned_cols=95 Identities=24% Similarity=0.251 Sum_probs=74.5
Q ss_pred EEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCC
Q psy17405 104 FKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDL 183 (241)
Q Consensus 104 v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDl 183 (241)
|+|+||+||+|..|.+++..+++++.... . -+.+++++|++||+|++.. .|.+. .||
T Consensus 1 v~i~agiHG~E~~g~~~~~~l~~~~~~~~--------~-l~g~v~~vp~~N~~g~~~~------------~R~~~--~DL 57 (252)
T cd06230 1 VAVVGGVHGNEPCGVQAIRRLLAELDEGQ--------A-LRGPVKLVPAANPLALEAG------------QRYLD--RDL 57 (252)
T ss_pred CEEEcccCCCcHHHHHHHHHHHHHHhhhc--------c-cccEEEEEeCcCHHHHHhC------------CCCCC--cCC
Confidence 58999999999999999999999997631 2 2567999999999999863 55555 999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCC--CeEEEEecCCCc
Q psy17405 184 NRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNP--FVLSGNLHGKKP 234 (241)
Q Consensus 184 NRnf~~~w~~~~~~~~~~~~~~~sepEt~al~~~~~~~~--~~~~idlH~g~~ 234 (241)
||+||..-+. ..+|.+....+.+.+. .+++||||+++.
T Consensus 58 NR~fpg~~~~-------------~~~~~~~a~~l~~~i~~~~d~~iDlH~~~~ 97 (252)
T cd06230 58 NRIFPGDPDS-------------GTYEDRLAAELCPELEGLADAVLDLHSTSS 97 (252)
T ss_pred CCCCCCCCCC-------------CCHHHHHHHHHHHHHhhhccEEEECCCCCC
Confidence 9999975320 2556666666666653 699999999985
No 56
>cd06252 M14_ASTE_ASPA_like_2 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.54 E-value=3e-14 Score=126.73 Aligned_cols=112 Identities=21% Similarity=0.195 Sum_probs=83.8
Q ss_pred CCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEEEeccCcccccc
Q psy17405 81 NRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSA 160 (241)
Q Consensus 81 Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~ 160 (241)
.-.|++..|....+ |+|+|+||+||+|..|..++.+++++|... . -+-++++||++||.|+..
T Consensus 21 ~~~iPv~v~~g~~g-------p~v~I~aGiHGdE~~G~~~~~~L~~~l~~~---------~-l~G~vi~vP~~Np~a~~~ 83 (316)
T cd06252 21 TVMIPITVIKNGDG-------PTVLLTGGNHGDEYEGQIALLRLARRLDPE---------E-VRGRVIILPALNFPAVQA 83 (316)
T ss_pred ceEeeEEEEeCCCC-------CEEEEEccCCCCchHHHHHHHHHHHhCChh---------h-CeEEEEEEeCCCHHHHHh
Confidence 35788777775433 899999999999999999999999988542 1 255899999999999976
Q ss_pred cccCCCCCCCCCCCCCCC-CccCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHh-C--CCeEEEEecCCCcce
Q psy17405 161 AKEGSCNSLASFVGRNNA-NGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKN-N--PFVLSGNLHGKKPNK 236 (241)
Q Consensus 161 ~~~~~~~~~~~~~~r~n~-~GvDlNRnf~~~w~~~~~~~~~~~~~~~sepEt~al~~~~~~-~--~~~~~idlH~g~~~~ 236 (241)
. .|.++ .|.||||.||...+ ...| +.+++.+.+ . +.|++||||+++...
T Consensus 84 ~------------~R~~p~D~~DLNR~Fpg~~~--------------gs~~-~riA~~i~~~l~~~aD~~iDLHt~~~~~ 136 (316)
T cd06252 84 G------------TRTSPIDGGNLNRVFPGDPD--------------GTVT-EMIAHYLTTELLPRADYVIDLHSGGRSL 136 (316)
T ss_pred c------------cccCCCCCCcHHhhCCCCCC--------------CCHH-HHHHHHHHHhhhhcCcEEEEccCCCCcc
Confidence 3 56654 68999999997532 1233 444444443 3 789999999996543
No 57
>PF10994 DUF2817: Protein of unknown function (DUF2817); InterPro: IPR021259 This family of proteins has no known function.
Probab=99.52 E-value=3.6e-13 Score=120.24 Aligned_cols=160 Identities=20% Similarity=0.203 Sum_probs=118.3
Q ss_pred CCHHHHHHHHHHHHHhCCCCeEEEEee---eeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCC-cchHHHHHHHH
Q psy17405 50 LSFDELTKFLVAAAQQNPSKVKLHSIG---KSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDE-VVGYELMNYLI 125 (241)
Q Consensus 50 ~ty~ei~~~l~~la~~~p~~v~~~~iG---~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E-~~g~~~~~~l~ 125 (241)
.||++..+.+.+.+++-...++-..+. ..-|...+.++.+++... +..+++++|.||-| ..|+.+...++
T Consensus 3 ~sY~~AR~~Fl~aA~~~ga~~~~~~~p~~G~~ge~L~~Dva~lg~~~a------~~lLv~~SGtHGVEGf~GSaiQ~~~L 76 (341)
T PF10994_consen 3 QSYAEARERFLAAAEAAGAKLESYPHPLRGPDGEDLATDVAWLGPKDA------SRLLVLTSGTHGVEGFAGSAIQIALL 76 (341)
T ss_pred ccHHHHHHHHHHHHHHcCCcceeeeCCCCCCCCCcceeEEEEecCCCC------CeEEEEEecCCcccccccHHHHHHHH
Confidence 479999999999999877655555443 333344577778886443 45899999999999 88999999999
Q ss_pred HHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCC---------------
Q psy17405 126 EYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQ--------------- 190 (241)
Q Consensus 126 ~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~--------------- 190 (241)
++... +.+.+++-|++|..+||.|+.+. .|.|.++|||||||-..
T Consensus 77 ~~~~~--------~~~~~~~avllVHAlNPyGfa~~------------RR~nE~NVDLNRNfldf~~~~p~N~~Y~~l~~ 136 (341)
T PF10994_consen 77 REDLA--------RSLPAGVAVLLVHALNPYGFAWL------------RRVNENNVDLNRNFLDFSQPLPANPGYEELHP 136 (341)
T ss_pred Hcccc--------cccCCCCeEEEEEccCcccccee------------eccCCcCcCcccccCcccCCCCCCccHHHHHH
Confidence 98733 45667999999999999999985 78999999999999632
Q ss_pred ------CCCC----------------C--------CCCCCCCC------CCCCcHHHHHHHHHHHhC----CCeEEEEec
Q psy17405 191 ------FDSS----------------S--------ERREQPLN------VKKLEPETLAMISFIKNN----PFVLSGNLH 230 (241)
Q Consensus 191 ------w~~~----------------~--------~~~~~~~~------~~~sepEt~al~~~~~~~----~~~~~idlH 230 (241)
|... + ..|.|..+ ....+..++.|+++++++ +-.++||+|
T Consensus 137 ~l~p~~~~~~~~~~~~~~l~~~~~~~G~~a~~~av~~GQY~~P~GlfYGG~~p~wS~~~L~~il~~~~~~~~~v~~iDlH 216 (341)
T PF10994_consen 137 LLNPSDWPPPADAAAFAALAKYIARHGFAAFKQAVSGGQYTHPDGLFYGGTEPEWSNRTLREILREHLAGAERVAWIDLH 216 (341)
T ss_pred hhCCCCCCchhhHHHHHHHHHHHHHHhHHHHHHHHhCcCcCCCCccccCCCCccHHHHHHHHHHHHHhhcCcEEEEEEeC
Confidence 1111 0 01111111 123677889999999986 677899999
Q ss_pred CCCcc
Q psy17405 231 GKKPN 235 (241)
Q Consensus 231 ~g~~~ 235 (241)
+|-..
T Consensus 217 TGlGp 221 (341)
T PF10994_consen 217 TGLGP 221 (341)
T ss_pred CCCCC
Confidence 98765
No 58
>TIGR02994 ectoine_eutE ectoine utilization protein EutE. Members of this family, part of the succinylglutamate desuccinylase / aspartoacylase family (pfam04952), belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it the operon is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida.
Probab=99.50 E-value=1.3e-13 Score=122.87 Aligned_cols=113 Identities=19% Similarity=0.201 Sum_probs=83.1
Q ss_pred eeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccc
Q psy17405 83 DLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAK 162 (241)
Q Consensus 83 ~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~ 162 (241)
.|++..|...+ .|+++|+||+||+|..|..++.+++++|... . -+-+|++||++||-|+...
T Consensus 36 ~ipv~vi~~~~-------gp~v~i~agvHGdE~~G~~~~~~L~~~l~~~--------~--l~G~v~~vP~~N~~g~~~~- 97 (325)
T TIGR02994 36 MIPITVIKNGI-------GPTALLTGGNHGDEYEGPIALFELARTLDAE--------D--VSGRIIIVPAMNYPAFRAG- 97 (325)
T ss_pred EeeEEEEeCCC-------CCEEEEEeccCCCchHHHHHHHHHHhhCChh--------h--CcEEEEEEcCCCHHHHHhh-
Confidence 56666555333 3899999999999999999999999988542 1 2457999999999999764
Q ss_pred cCCCCCCCCCCCCCCC-CccCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHH-hC--CCeEEEEecCCCcceec
Q psy17405 163 EGSCNSLASFVGRNNA-NGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIK-NN--PFVLSGNLHGKKPNKVK 238 (241)
Q Consensus 163 ~~~~~~~~~~~~r~n~-~GvDlNRnf~~~w~~~~~~~~~~~~~~~sepEt~al~~~~~-~~--~~~~~idlH~g~~~~~~ 238 (241)
.|.+. .|.||||.||..- ..+. ++.|+..+. +. ..|++||||+++.--..
T Consensus 98 -----------~r~~p~d~~nlNR~fPG~~--------------~gs~-~~riA~~l~~~l~~~aD~~iDlHs~~~~~~~ 151 (325)
T TIGR02994 98 -----------TRTSPIDRGNLNRSFPGRP--------------DGTV-TEKIADYFQRHLLPLADIVLDFHSGGKTLDF 151 (325)
T ss_pred -----------CCCCCCCCCccCCCCCCCC--------------CCCH-HHHHHHHHHHhHHhhCCEEEECCCCCccccc
Confidence 44443 7899999999641 1133 566666664 32 69999999999974333
Q ss_pred c
Q psy17405 239 F 239 (241)
Q Consensus 239 y 239 (241)
+
T Consensus 152 ~ 152 (325)
T TIGR02994 152 V 152 (325)
T ss_pred c
Confidence 3
No 59
>COG2866 Predicted carboxypeptidase [Amino acid transport and metabolism]
Probab=99.47 E-value=1.3e-13 Score=124.86 Aligned_cols=101 Identities=35% Similarity=0.515 Sum_probs=84.0
Q ss_pred CeEEEEeeeeCCCC-eeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHHHhcCC-CHHHHHhhcCce
Q psy17405 69 KVKLHSIGKSVQNR-DLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIINDGT-DERVTRLINTTD 146 (241)
Q Consensus 69 ~v~~~~iG~S~~Gr-~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~-~~~~~~ll~~~~ 146 (241)
.+....+|+|.+|| ++...+-..+. .+++++|++++|++ |..++..++..++..+.+ +..++.++++++
T Consensus 120 ~~~~~~~g~sv~GR~~~~i~~~~~~~------~~~~i~~~~~~H~~---g~~~~~~~~~~li~r~~~~~~~~~~lld~~~ 190 (374)
T COG2866 120 LVELELIGRSVEGRDDPLITFPESNP------EHKTILITAGQHAR---GEKMVEWFLYNLILRYLDPDVQVRKLLDRAD 190 (374)
T ss_pred cceeeecCccccccccceeeecCCCC------ccceeeEecccccC---ccHHHHHHHHHHHHHhcCccchhhhhhcccc
Confidence 46678899999999 55555544433 37899999999998 777888888888887733 488999999999
Q ss_pred EEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCC
Q psy17405 147 IFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPD 189 (241)
Q Consensus 147 v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~ 189 (241)
++|||.+||||+++. ..|.|+.|+||||+|+.
T Consensus 191 ~~vvp~~NpDG~~~~-----------~lr~na~~~dLnr~~~~ 222 (374)
T COG2866 191 LHVVPNVNPDGSDLG-----------NLRTNANGVDLNRNFIA 222 (374)
T ss_pred EEEecccCCchhhhc-----------ccccccCccchhhhccC
Confidence 999999999999986 25899999999999965
No 60
>cd06253 M14_ASTE_ASPA_like_3 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.47 E-value=3.4e-13 Score=119.03 Aligned_cols=115 Identities=23% Similarity=0.291 Sum_probs=81.5
Q ss_pred CeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEEEeccCccccccc
Q psy17405 82 RDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAA 161 (241)
Q Consensus 82 r~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~ 161 (241)
..|....++.+ .|+|+|+||+||+|..|..++.+++++|......+ .+.-+-++++||++||.|+...
T Consensus 8 ~~~~~~~~g~~--------gp~v~i~agvHGdE~~G~~~~~~L~~~l~~~~~~~----~~~l~g~v~~vP~~N~~a~~~~ 75 (298)
T cd06253 8 NRIEGFNFGGG--------EKRICIVGGIHGDELQGLYICSLLIRFLKELEKRG----PLKLNGIVDVIPSVNPLGLNLG 75 (298)
T ss_pred cEEEeeecCCC--------CcEEEEEccCccchHHHHHHHHHHHHHHhhhhccc----ccccCceEEEEeCcCHHHHHHh
Confidence 34556666632 48999999999999999999999999998631100 1122778999999999999763
Q ss_pred ccCCCCCCCCCCCCCCC-CccCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHh--CCCeEEEEecCCCcc
Q psy17405 162 KEGSCNSLASFVGRNNA-NGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKN--NPFVLSGNLHGKKPN 235 (241)
Q Consensus 162 ~~~~~~~~~~~~~r~n~-~GvDlNRnf~~~w~~~~~~~~~~~~~~~sepEt~al~~~~~~--~~~~~~idlH~g~~~ 235 (241)
.|... .|.||||.||..-.. ++ ++.++..+.+ -..+++||||++..-
T Consensus 76 ------------~R~~p~d~~dlNR~Fpg~~~g--------------~~-~~riA~~~~~~~~~~d~~iDLHsg~~~ 125 (298)
T cd06253 76 ------------TRFWPTDNSDINRMFPGDPQG--------------ET-TQRIAAAVFEDVKGADYCIDLHSSNIF 125 (298)
T ss_pred ------------hCcCCCCCCcccccCCCCCCC--------------cH-HHHHHHHHHHHhcCCCEEEEccCCCcc
Confidence 45543 789999999964211 22 3334333333 367999999998644
No 61
>PF04952 AstE_AspA: Succinylglutamate desuccinylase / Aspartoacylase family; InterPro: IPR007036 This family describes both succinylglutamate desuccinylase that catalyses the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway and also includes aspartoacylase 3.5.1.15 from EC which cleaves acylaspartate into a fatty acid and aspartate. Mutations in P45381 from SWISSPROT lead to Canavan disease [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0008152 metabolic process; PDB: 3CDX_A 3FMC_A 3NA6_A 2BCO_B 3B2Y_A 3LWU_A 3IEH_A 2QVP_B 2G9D_A 1YW4_A ....
Probab=99.43 E-value=1.3e-13 Score=121.13 Aligned_cols=107 Identities=26% Similarity=0.333 Sum_probs=79.2
Q ss_pred CeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCC-Cc
Q psy17405 102 PMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNA-NG 180 (241)
Q Consensus 102 p~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~-~G 180 (241)
|+++|+||+||||+.|..++..+++++.... -+-+++++|+.||.|+... .|... .|
T Consensus 3 p~l~i~agvHGnE~~G~~a~~~L~~~l~~~~----------~~G~~~~vp~~N~~a~~~~------------~R~~~~d~ 60 (292)
T PF04952_consen 3 PTLLITAGVHGNEYNGIEALQRLLRELDPAD----------LSGTVIIVPVANPPAFRQG------------TRFVPIDG 60 (292)
T ss_dssp -EEEEEE-SSTTBCHHHHHHHHHHHHHHGGG----------CTCEEEEEEESSHHHHHHT------------SSSSTTTS
T ss_pred CEEEEEcCcccChHHHHHHHHHHHhcchhcc----------cCCceEEEEEeCHHHHHhc------------cccCCCCC
Confidence 8999999999999999999999999997632 2558999999999999874 45554 89
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC---CCeEEEEecCCCcce
Q psy17405 181 VDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN---PFVLSGNLHGKKPNK 236 (241)
Q Consensus 181 vDlNRnf~~~w~~~~~~~~~~~~~~~sepEt~al~~~~~~~---~~~~~idlH~g~~~~ 236 (241)
.||||.||......... .....-+++.++..+.+. +.++++|||+++...
T Consensus 61 ~dLNR~Fpg~~~~~~~~------~~~~~~~~~~ia~~l~~~~~~~aD~~iDLHs~~~~~ 113 (292)
T PF04952_consen 61 RDLNRCFPGDALGSSLQ------EDYEATETERIAHALFEEILPDADYVIDLHSGSSSS 113 (292)
T ss_dssp SBGGGSTTHHHHCHCTT------HHHHHHHHHHHHHHHHHTTCCCGSEEEEEEEESSTB
T ss_pred CCHHHhCCCCccccccc------cccchhHHHHHHHHHhhhhhccceEEEEeccCCCCC
Confidence 99999999643220000 000125677777777763 699999999998653
No 62
>COG3608 Predicted deacylase [General function prediction only]
Probab=99.36 E-value=3.6e-12 Score=112.29 Aligned_cols=108 Identities=26% Similarity=0.334 Sum_probs=82.3
Q ss_pred eEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEEEeccCccccccccc
Q psy17405 84 LWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKE 163 (241)
Q Consensus 84 i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~ 163 (241)
++++.++++++ |+++|+||+||+|..|+.++..+++.|-... =.-+|+|||.+||-+++..
T Consensus 38 ~~~~~~~~g~g-------p~~~l~ag~HGdEl~G~~al~~Li~~L~~a~----------i~GtV~iVP~aN~~a~~~~-- 98 (331)
T COG3608 38 TPVFVFGNGPG-------PSVLLQAGVHGDELPGVIALRRLIPALDPAD----------ISGTVIIVPIANPPAFEAQ-- 98 (331)
T ss_pred ceEEEecCCCC-------CEEEEEecccccccchHHHHHHHHHhcCHhh----------cCceEEEEeccCHHHHHhh--
Confidence 45666666555 8999999999999999999999999997632 1448999999999999874
Q ss_pred CCCCCCCCCCCCCCC-CccCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC---CCeEEEEecCCCcc
Q psy17405 164 GSCNSLASFVGRNNA-NGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN---PFVLSGNLHGKKPN 235 (241)
Q Consensus 164 ~~~~~~~~~~~r~n~-~GvDlNRnf~~~w~~~~~~~~~~~~~~~sepEt~al~~~~~~~---~~~~~idlH~g~~~ 235 (241)
+|... .+.|+||+||-.=+ | .-|..+++.++.+ ..|+++|||+|+.-
T Consensus 99 ----------~R~~p~d~~N~NR~fPg~~d---------g------s~t~ria~~l~r~L~~~aD~VlDlHsg~~~ 149 (331)
T COG3608 99 ----------GRFSPGDDTNLNRAFPGRPD---------G------SATERIADRLKRLLLPLADIVLDLHSGGEG 149 (331)
T ss_pred ----------cccCCCCCCcccccCCCCCC---------C------CHHHHHHHHHHHhhhcccCEEEEccCCCCc
Confidence 45544 78999999994311 1 1245556666553 48999999999854
No 63
>PRK02259 aspartoacylase; Provisional
Probab=99.25 E-value=1.8e-11 Score=107.63 Aligned_cols=100 Identities=21% Similarity=0.178 Sum_probs=70.8
Q ss_pred CeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCcc
Q psy17405 102 PMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGV 181 (241)
Q Consensus 102 p~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~Gv 181 (241)
+.|+|+||+||||..|.+++..+++++... . + ....+++|+.||.|++.. .|.. ..
T Consensus 3 ~~v~i~aGvHGnE~~Gv~~v~~l~~~~~~~--------~-~-~g~~i~~~i~Np~A~~~~------------~Ry~--~~ 58 (288)
T PRK02259 3 NRVAIVGGTHGNEITGIYLVKKWQQQPNLI--------N-R-KGLEVQTVIGNPEAIEAG------------RRYI--DR 58 (288)
T ss_pred cEEEEEcCccCChhHHHHHHHHHHhccccc--------c-c-CccEEEEEeeCHHHHHhC------------CCCC--cc
Confidence 689999999999999999998888876441 1 1 335788899999999763 4433 37
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC------CCeEEEEecCCCc
Q psy17405 182 DLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN------PFVLSGNLHGKKP 234 (241)
Q Consensus 182 DlNRnf~~~w~~~~~~~~~~~~~~~sepEt~al~~~~~~~------~~~~~idlH~g~~ 234 (241)
||||.||...... +. .+..|.+.-..+.+.. +.+++||||+++.
T Consensus 59 DLNR~Fpg~~~~~------~~---~~~~e~~~A~~l~~~~~~~~~~~~D~~iDLHttts 108 (288)
T PRK02259 59 DLNRSFRLDLLQN------PD---LSGYEQLRAKELVQQLGPKGNSPCDFIIDLHSTTA 108 (288)
T ss_pred cCCCCCCCccccC------CC---CCCHHHHHHHHHHHHHhhccCccCcEEEECCCCCC
Confidence 9999999753321 00 1235555444444443 7899999999753
No 64
>cd06909 M14_ASPA Aspartoacylase (ASPA) belongs to the Succinylglutamate desuccinylase/aspartoacylase subfamily of the M14 family of metallocarboxypeptidases. ASPA (also known as aminoacylase 2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.24 E-value=2.4e-11 Score=106.26 Aligned_cols=99 Identities=21% Similarity=0.150 Sum_probs=68.2
Q ss_pred CeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCcc
Q psy17405 102 PMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGV 181 (241)
Q Consensus 102 p~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~Gv 181 (241)
+.|+|+||+||||..|.+++..+++++... ......+++|+.||.+++.. .|.. ..
T Consensus 1 ~~v~I~aGvHGnE~~Gv~~v~~l~~~~~~~----------~~~~~~v~~~i~Np~A~~~~------------~Ry~--d~ 56 (282)
T cd06909 1 KRVAIVGGTHGNELTGVYLVKKWLQQPELI----------QRPSLEVHPVIANPRAVEAC------------RRYI--DT 56 (282)
T ss_pred CeEEEEcCccCChHHHHHHHHHHHhccccc----------ccCCeEEEEEecCHHHHHhC------------CccC--CC
Confidence 369999999999999999999888876542 12334566777899999753 4543 58
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC------CCeEEEEecCCC
Q psy17405 182 DLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN------PFVLSGNLHGKK 233 (241)
Q Consensus 182 DlNRnf~~~w~~~~~~~~~~~~~~~sepEt~al~~~~~~~------~~~~~idlH~g~ 233 (241)
||||.||...... +. .+.+|.+.-+.+.+.. +.+++||||++.
T Consensus 57 DLNR~Fpg~~~~~------~~---~~~~e~~~A~~l~~~l~~~~~~~~D~~iDLHstt 105 (282)
T cd06909 57 DLNRCFTLENLSN------SE---LLPYEVKRAKELNQKLGPKGNSPCDFVIDLHNTT 105 (282)
T ss_pred CCCCCCCCCccCC------CC---CCCHHHHHHHHHHHHHhhccCCCceEEEECCCCC
Confidence 9999999764321 01 1234444444444432 479999999974
No 65
>cd06256 M14_ASTE_ASPA_like_6 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.23 E-value=4e-11 Score=106.98 Aligned_cols=97 Identities=18% Similarity=0.231 Sum_probs=71.7
Q ss_pred CeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCcc
Q psy17405 102 PMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGV 181 (241)
Q Consensus 102 p~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~Gv 181 (241)
|.|+|+||+||||..|.+++.++++++... . +... +++++.||-|++.. .|....|.
T Consensus 35 p~v~I~aGvHGNE~~Gi~al~~ll~~~~~~--------~-~~~~--~~l~i~Np~A~~~~------------~R~~~d~~ 91 (327)
T cd06256 35 PPLFVSTLLHGNEPTGLQAVQRLLKALEAR--------P-LPRS--LLLFIGNVAAALAG------------VRRLDGQP 91 (327)
T ss_pred CeEEEEccccCCcHHHHHHHHHHHHhCChh--------h-cCCc--EEEEEeCHHHHHhC------------cccCCCCC
Confidence 799999999999999999999999888642 2 2333 34456999999763 56666688
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCCeEEEEecCCC
Q psy17405 182 DLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGKK 233 (241)
Q Consensus 182 DlNRnf~~~w~~~~~~~~~~~~~~~sepEt~al~~~~~~~~~~~~idlH~g~ 233 (241)
||||.||.... ...+-.++.|.+.+.+..++++||||++.
T Consensus 92 DLNR~Fpg~~~------------s~e~r~A~~l~~~l~~~~~d~~IDLHstt 131 (327)
T cd06256 92 DYNRCWPGPYD------------DPEGRLAEEVLELLADERPEASIDIHNNT 131 (327)
T ss_pred CccCCCCCCCC------------CHHHHHHHHHHHHHHhcCCcEEEECCCCC
Confidence 99999997532 01244555566666555678999999874
No 66
>cd06910 M14_ASTE_ASPA_like_7 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.15 E-value=9e-11 Score=102.37 Aligned_cols=100 Identities=17% Similarity=0.115 Sum_probs=66.4
Q ss_pred CeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCC---
Q psy17405 102 PMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNA--- 178 (241)
Q Consensus 102 p~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~--- 178 (241)
|+|+|+||+||||..|.+++..++++-. .. +. -+++++ +.||-++... .|.++
T Consensus 1 P~v~isagvHGnE~~Gi~al~~l~~~~~---------~~-l~-G~li~~-~~N~~A~~~~------------~~~~p~~~ 56 (272)
T cd06910 1 PHVMINALVHGNEICGAIALDALLREGL---------RP-RR-GRLTLA-FANVAAYARF------------DPNNPTAS 56 (272)
T ss_pred CEEEEEcCcccChHHHHHHHHHHHhCcc---------cc-cC-CCEEEE-EECHHHHHhc------------ccCCCccc
Confidence 7899999999999999999999997411 11 32 345565 7999999753 22222
Q ss_pred --CccCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC-CCeEEEEecCCCcc
Q psy17405 179 --NGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN-PFVLSGNLHGKKPN 235 (241)
Q Consensus 179 --~GvDlNRnf~~~w~~~~~~~~~~~~~~~sepEt~al~~~~~~~-~~~~~idlH~g~~~ 235 (241)
.+.||||.||..+... + ....|.+.-..+..-. ..+++||||++...
T Consensus 57 R~~~~dLNR~Fpg~~~~g--------~--~~~~e~~~A~~l~~~i~~aD~~iDLHt~~~~ 106 (272)
T cd06910 57 RFVDEDMNRVWSPDVLDG--------P--RDSIELRRARELRPVIDTADYLLDLHSMQWP 106 (272)
T ss_pred ccCCCCcCCCCCCcccCC--------C--cccHHHHHHHHHHHHHhhCCEEEECCCCCCC
Confidence 3579999999754221 0 0134544433332211 67899999999873
No 67
>cd03855 M14_ASTE Peptidase M14 Succinylglutamate desuccinylase (ASTE, also known as N-succinyl-L-glutamate amidohydrolase, N2-succinylglutamate desuccinylase, and SGDS; EC 3.5.1.96) belongs to the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily of the M14 family of metallocarboxypeptidases. This group includes succinylglutamate desuccinylase that catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway. It hydrolyzes N-succinyl-L-glutamate to succinate and L-glutamate.
Probab=99.13 E-value=4.1e-10 Score=100.48 Aligned_cols=99 Identities=22% Similarity=0.301 Sum_probs=69.6
Q ss_pred CCCeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCC
Q psy17405 100 LKPMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNAN 179 (241)
Q Consensus 100 ~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~ 179 (241)
..|.|+|+||+||||..|.+++..+++++.... +.-...+++|+.||.++... .|..
T Consensus 41 ~gp~v~IsaGvHGNE~~Gi~~l~~ll~~l~~~~---------l~~~~~v~~~~~Np~A~~~~------------~R~~-- 97 (322)
T cd03855 41 ATKAIVISAGVHGNETAPIEILNQLIKDLLAGE---------LPLAHRLLFIFGNPPAMRAG------------ERFV-- 97 (322)
T ss_pred CCCeEEEEccccCCchhHHHHHHHHHHhhhhcc---------ccCCeEEEEEeeCHHHHHhC------------cccC--
Confidence 458999999999999999999999999997631 11223456778999999763 3432
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHH---H----HHHHHHhC---CCeEEEEecCC
Q psy17405 180 GVDLNRNFPDQFDSSSERREQPLNVKKLEPETL---A----MISFIKNN---PFVLSGNLHGK 232 (241)
Q Consensus 180 GvDlNRnf~~~w~~~~~~~~~~~~~~~sepEt~---a----l~~~~~~~---~~~~~idlH~g 232 (241)
..||||-||...... .+..|++ . +..++.+. ..++++|||++
T Consensus 98 d~DLNR~FpG~~~~~-----------~~~~E~~rA~~L~~~~~~~~~~~~~~~~d~~iDLHta 149 (322)
T cd03855 98 DENLNRLFSGRHQKD-----------EPGPERARAAELEQAVADFFAAGPSGAERWHYDLHTA 149 (322)
T ss_pred CCCccCCCCCCcccC-----------CCChHHHHHHHHHHHHHHHHhhcccccCcEEEEccCC
Confidence 359999999765420 0133433 3 33344443 68999999996
No 68
>PRK05324 succinylglutamate desuccinylase; Provisional
Probab=99.11 E-value=4.7e-10 Score=100.32 Aligned_cols=99 Identities=22% Similarity=0.252 Sum_probs=68.2
Q ss_pred CCCeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCC
Q psy17405 100 LKPMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNAN 179 (241)
Q Consensus 100 ~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~ 179 (241)
..|.|+|+||+||||+.|.+++..+++++.... +.-... +++|+.||.++... .|..
T Consensus 46 ~gp~v~IsaGvHGNE~~Gi~~l~~Ll~~l~~~~--------~~~~~~-v~~i~~Np~A~~~~------------~R~v-- 102 (329)
T PRK05324 46 STKALVLSAGIHGNETAPIELLDQLVRDLLAGE--------LPLRAR-LLVILGNPPAMRAG------------KRYL-- 102 (329)
T ss_pred CCCeEEEECCcccCcHHHHHHHHHHHHhhhccc--------cccCce-EEEEecCHHHHHhC------------cccC--
Confidence 458999999999999999999999999987631 111223 55558999999763 3433
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCCCCCcHHH---HHHHHHHHhC------CCeEEEEecCC
Q psy17405 180 GVDLNRNFPDQFDSSSERREQPLNVKKLEPET---LAMISFIKNN------PFVLSGNLHGK 232 (241)
Q Consensus 180 GvDlNRnf~~~w~~~~~~~~~~~~~~~sepEt---~al~~~~~~~------~~~~~idlH~g 232 (241)
..||||-||..+.+.. +.+|. +.|.+.++++ ..++++|||++
T Consensus 103 d~DLNR~FpG~~~~~~-----------~~~E~~rA~~L~~~i~~~~~~~~~~~D~~iDLHta 153 (329)
T PRK05324 103 DEDLNRLFGGRHQQFP-----------GSDEARRAAELEQAVEDFFAAGAERVRWHYDLHTA 153 (329)
T ss_pred CCCcccCCCCCcCCCC-----------CcHHHHHHHHHHHHHHHHhcccCccceEEEECCCC
Confidence 4699999998754321 11244 3344433332 47899999984
No 69
>TIGR03242 arg_catab_astE succinylglutamate desuccinylase. Members of this protein family are succinylglutamate desuccinylase, the fifth and final enzyme of the arginine succinyltransferase (AST) pathway for arginine catabolism. This model excludes the related protein aspartoacylase.
Probab=99.07 E-value=6.6e-10 Score=99.02 Aligned_cols=98 Identities=22% Similarity=0.278 Sum_probs=67.1
Q ss_pred CCeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCc
Q psy17405 101 KPMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANG 180 (241)
Q Consensus 101 kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~G 180 (241)
-|.|+|+||+||||..|.+++..+++++... .+.-+.++.++ +.||.|+... .|.. .
T Consensus 41 gp~v~IsaGvHGNE~~Gi~~l~~ll~~l~~~--------~~~~~~~l~~i-~~Np~A~~~~------------~R~~--~ 97 (319)
T TIGR03242 41 QKSLVISAGIHGNETAPIEILEQLLGDIAAG--------KLPLRVRLLVI-LGNPPAMRTG------------KRYL--H 97 (319)
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHhhhhhc--------cccCCceEEEE-EcCHHHHHhC------------cccC--C
Confidence 4899999999999999999999999998752 12224445444 7999999753 4433 3
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHH---HHHH----HHHhC---CCeEEEEecCC
Q psy17405 181 VDLNRNFPDQFDSSSERREQPLNVKKLEPETL---AMIS----FIKNN---PFVLSGNLHGK 232 (241)
Q Consensus 181 vDlNRnf~~~w~~~~~~~~~~~~~~~sepEt~---al~~----~~~~~---~~~~~idlH~g 232 (241)
.||||-||...... . ...|.+ .+.+ ++.+. ..+++||||++
T Consensus 98 ~DLNR~FpG~~~~~------~-----~~~E~~rA~~l~~~~~~~~~~~~~~~~D~~IDLHt~ 148 (319)
T TIGR03242 98 DDLNRMFGGRYQQL------A-----PSFETCRAAELEQCVEDFFSQGGRSVARWHYDLHTA 148 (319)
T ss_pred CCccCCCCCccccc------c-----CchHHHHHHHHHHHHHHHhccccCccceEEEECCCC
Confidence 69999999754211 0 122332 3333 44443 36999999986
No 70
>COG2988 Succinylglutamate desuccinylase [Amino acid transport and metabolism]
Probab=98.09 E-value=6.9e-06 Score=70.98 Aligned_cols=103 Identities=25% Similarity=0.224 Sum_probs=67.9
Q ss_pred eEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccC
Q psy17405 103 MFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVD 182 (241)
Q Consensus 103 ~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvD 182 (241)
.+.|+|||||||..+.+++-.++..+..++-. =...+.++ +-||-..... .| ...-|
T Consensus 45 ~lvIsaGiHGNEtapvEll~kl~~~~~ag~~p--------~a~r~L~i-lgNP~Ai~~g------------kR--YieqD 101 (324)
T COG2988 45 SLVISAGIHGNETAPVELLDKLQQKISAGQLP--------LAWRCLVI-LGNPPAIAAG------------KR--YIEQD 101 (324)
T ss_pred ceEEEecccCCccCcHHHHHHHHhhhhhcccC--------cceeEEEE-ecCcHHHHhc------------hH--HHhhh
Confidence 69999999999999999999999999875411 02334444 7899987652 11 23469
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCcHHH-HHHHHHHHhC--CCeEEEEecCCCc
Q psy17405 183 LNRNFPDQFDSSSERREQPLNVKKLEPET-LAMISFIKNN--PFVLSGNLHGKKP 234 (241)
Q Consensus 183 lNRnf~~~w~~~~~~~~~~~~~~~sepEt-~al~~~~~~~--~~~~~idlH~g~~ 234 (241)
|||-|...|.......+. +.-|- +++..+...- ..++++|||+.-.
T Consensus 102 lNR~F~gr~q~~~~ne~~------ra~eler~~q~ff~~~~~~vr~h~DLHtair 150 (324)
T COG2988 102 LNRMFGGRPQSFSENETL------RAYELERALQDFFQQGKESVRWHLDLHTAIR 150 (324)
T ss_pred HHHHhCCCcccCCCCchh------hhHHHHHHHHHHHhcCCCcceEEEEhhhhhh
Confidence 999998887554321111 22222 3444444442 6889999998543
No 71
>PF09892 DUF2119: Uncharacterized protein conserved in archaea (DUF2119); InterPro: IPR019218 This entry represents a family of hypothetical archaeal proteins of unknown function.
Probab=97.47 E-value=0.00035 Score=56.93 Aligned_cols=83 Identities=20% Similarity=0.269 Sum_probs=59.3
Q ss_pred CeEEEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCcc
Q psy17405 102 PMFKYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGV 181 (241)
Q Consensus 102 p~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~Gv 181 (241)
|+=+++||+||+|+--+. .+++.|..+ .+.+-.++|+| +..+|--++ +
T Consensus 7 p~rLFvgGlHG~Egk~t~---~iL~~l~~~---------~~~~G~l~i~p-lv~~~kYiS------------T------- 54 (193)
T PF09892_consen 7 PKRLFVGGLHGDEGKDTS---PILKRLKPN---------DFNNGNLIIIP-LVENSKYIS------------T------- 54 (193)
T ss_pred ceEEEEeeccCcchhhHH---HHHHHhCcc---------cccCceEEEEe-CCCCCCcee------------e-------
Confidence 899999999999987644 334444321 22346899999 555565443 1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCCeEEEEecCCCcc
Q psy17405 182 DLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGKKPN 235 (241)
Q Consensus 182 DlNRnf~~~w~~~~~~~~~~~~~~~sepEt~al~~~~~~~~~~~~idlH~g~~~ 235 (241)
|+.+|-. ..+-+.|.+++.+++|++++-+|+++..
T Consensus 55 -L~~~YY~------------------s~~Gk~il~lIe~y~P~~Y~ElHsY~~~ 89 (193)
T PF09892_consen 55 -LDPEYYK------------------SEMGKKILDLIEKYKPEFYFELHSYSKE 89 (193)
T ss_pred -cCHHHhc------------------chhhhHHHHHHHHhCCceEEEEeecCHH
Confidence 3445532 4567899999999999999999998754
No 72
>COG4073 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.85 E-value=0.0026 Score=50.89 Aligned_cols=81 Identities=19% Similarity=0.268 Sum_probs=59.3
Q ss_pred CeE-EEEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCc
Q psy17405 102 PMF-KYVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANG 180 (241)
Q Consensus 102 p~v-~i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~G 180 (241)
|+= +++||+||+|+-.++-++. ++.+-. ++-++.|+|.+|+.-|--+
T Consensus 14 pVr~lfV~GlHGdEgk~te~ilr-l~~~~~------------~ng~l~Vip~v~n~~YIST------------------- 61 (198)
T COG4073 14 PVRRLFVGGLHGDEGKATEPILR-LRVLPE------------ENGVLRVIPKVENGPYIST------------------- 61 (198)
T ss_pred ceeeEEEeeccCcccchhhhhhh-hcccCc------------cCceEEEEeccCCCCceee-------------------
Confidence 443 8999999999999887776 333332 2568999999888776432
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCCeEEEEecCCCc
Q psy17405 181 VDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGKKP 234 (241)
Q Consensus 181 vDlNRnf~~~w~~~~~~~~~~~~~~~sepEt~al~~~~~~~~~~~~idlH~g~~ 234 (241)
+| -.|- ..++-+-+.+++++++|++++-+|.+..
T Consensus 62 ld--p~yy------------------~s~~G~~ilr~vek~rP~vY~ElH~Yr~ 95 (198)
T COG4073 62 LD--PSYY------------------RSEVGARILRVVEKLRPDVYVELHCYRP 95 (198)
T ss_pred cC--hhhc------------------cchhhHHHHHHHHHhCCceEEEEeecCH
Confidence 22 2331 2456688889999999999999998764
No 73
>KOG3641|consensus
Probab=63.98 E-value=4 Score=39.08 Aligned_cols=121 Identities=21% Similarity=0.216 Sum_probs=59.3
Q ss_pred CCCCCCHHHHHHHHHHHHHhCCCCeEE-------EEeeeeCCCCeeEEEEEecCCC------------CCCCCCCCeE-E
Q psy17405 46 NPHYLSFDELTKFLVAAAQQNPSKVKL-------HSIGKSVQNRDLWALQISRNVA------------SGRNLLKPMF-K 105 (241)
Q Consensus 46 ~~~y~ty~ei~~~l~~la~~~p~~v~~-------~~iG~S~~Gr~i~~~~is~~~~------------~~~~~~kp~v-~ 105 (241)
.+.-.+|+|-...+.++...+|+.-.. .-...|.+|...+...|.+--. ......+.-. +
T Consensus 49 ~~~s~s~~~~e~~~~~~~~~~~~~~~~d~~~~~~~~~~~s~~~~~~~~~~iv~~L~~~~~~~~~~l~~p~~t~~p~df~~ 128 (650)
T KOG3641|consen 49 TCYSFSYSDCEELLNQLDQRFPESSDLDTILQHRELLCYSLDGLRGDLLTIVSCLREDRLPRLEQLFPPTSTPRPFDFAL 128 (650)
T ss_pred cccCcchhHHHHHHHHHHHhhhccCccchhHHHHHhhhcCCcccccchhHHHHHHHHHhhhccccCCCCccCCCcccCCC
Confidence 345566777777777777776552111 1123455666555555543100 0001100001 1
Q ss_pred -EEeeecCCCcchHHHHHHHHHHHHHhcCCCHHHHHhhcCceEEEEeccCcccccccccCCCCCCCCCCCCCCCCccCCC
Q psy17405 106 -YVANIHGDEVVGYELMNYLIEYLIINDGTDERVTRLINTTDIFIIPSLNPDGYSAAKEGSCNSLASFVGRNNANGVDLN 184 (241)
Q Consensus 106 -i~agiHg~E~~g~~~~~~l~~~L~~~~~~~~~~~~ll~~~~v~ivP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlN 184 (241)
..+-.|+ |..+. .+.. -.....+|+....|++-+.+ ||+.||||+... .+|..+|..|
T Consensus 129 pt~~~~~P-~t~~n-~~F~----g~~d~~dde~~~~l~~~~v~--Vp~l~P~~~~~~-------------~~~trsV~e~ 187 (650)
T KOG3641|consen 129 PTSSRVHP-ETPSN-FVFN----GFLDDIDDERNQTLRRLFVF--VPMLNPDGVVRG-------------HYNTRSVNEN 187 (650)
T ss_pred ccccccCC-CCCcc-eeec----cccccccchhhhhHhhheee--eeccCCcEEEEE-------------eeeccccccc
Confidence 4566777 33321 2221 11111244555555544333 999999999764 2333667777
Q ss_pred CCC
Q psy17405 185 RNF 187 (241)
Q Consensus 185 Rnf 187 (241)
|.+
T Consensus 188 ~~~ 190 (650)
T KOG3641|consen 188 RQY 190 (650)
T ss_pred cce
Confidence 665
No 74
>COG1029 FwdB Formylmethanofuran dehydrogenase subunit B [Energy production and conversion]
Probab=50.56 E-value=40 Score=30.85 Aligned_cols=45 Identities=22% Similarity=0.343 Sum_probs=31.8
Q ss_pred HHHHhhcCceEEEEec---cCcccccccccCCCCCCCCCCCCCCCCccCCCCCCCCC
Q psy17405 137 RVTRLINTTDIFIIPS---LNPDGYSAAKEGSCNSLASFVGRNNANGVDLNRNFPDQ 190 (241)
Q Consensus 137 ~~~~ll~~~~v~ivP~---~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~ 190 (241)
-+.+|-+.+.|+++|+ .|.-|+...-. | ...-..++|+-|-+|..
T Consensus 272 Lv~~LNe~ak~tli~mrgH~Nv~GFnqv~~----~-----e~GYpf~vdF~rG~pry 319 (429)
T COG1029 272 LVKDLNEYAKFTLIPMRGHYNVTGFNEVLS----W-----ETGYPFAVDFSRGYPRY 319 (429)
T ss_pred HHHHHhhhceEEEEEeccccccccccchhh----h-----hhCCceeeecccCCcCC
Confidence 3567778889999998 57777754311 1 23446889999999875
No 75
>COG3741 HutG N-formylglutamate amidohydrolase [Amino acid transport and metabolism]
Probab=50.02 E-value=40 Score=29.34 Aligned_cols=11 Identities=9% Similarity=-0.136 Sum_probs=9.7
Q ss_pred CCCeEEEEecC
Q psy17405 221 NPFVLSGNLHG 231 (241)
Q Consensus 221 ~~~~~~idlH~ 231 (241)
+...+.+|+||
T Consensus 144 ~G~avLiDcHS 154 (272)
T COG3741 144 FGAAVLIDCHS 154 (272)
T ss_pred cCeEEEEeccc
Confidence 57889999998
No 76
>KOG3374|consensus
Probab=49.76 E-value=98 Score=25.35 Aligned_cols=57 Identities=19% Similarity=0.253 Sum_probs=32.0
Q ss_pred CCCCCCHHHHHHHHHHHHHhCCCCeEEEEee--eeCCCCee-EEEEEecCCCCCCCCCCCeEEEE
Q psy17405 46 NPHYLSFDELTKFLVAAAQQNPSKVKLHSIG--KSVQNRDL-WALQISRNVASGRNLLKPMFKYV 107 (241)
Q Consensus 46 ~~~y~ty~ei~~~l~~la~~~p~~v~~~~iG--~S~~Gr~i-~~~~is~~~~~~~~~~kp~v~i~ 107 (241)
...-++|+.+..++-..+ ++-.+.++. .-+.|+|. -++.|+++.. +...+.|.++++
T Consensus 38 ~p~r~d~A~iAR~lvh~~----~Wgal~TlSt~e~vkG~Pf~nViS~sDg~p-~~gtG~pyFyLt 97 (210)
T KOG3374|consen 38 RPQRLDHAKIARDLVHRA----NWGALGTLSTNERVKGYPFVNVISISDGDP-NNGTGRPYFYLT 97 (210)
T ss_pred CCchhhHHHHHHHHhhhc----ccceeeeeeecccccCCccceEEEccCCCC-cCCCCceEEEec
Confidence 334566777766655432 233444443 33478884 4556777655 444667777654
No 77
>KOG1350|consensus
Probab=45.26 E-value=10 Score=34.21 Aligned_cols=64 Identities=13% Similarity=0.169 Sum_probs=42.9
Q ss_pred HHHHHHHHHHhCCCCeEEEEee-eeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHH
Q psy17405 55 LTKFLVAAAQQNPSKVKLHSIG-KSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYEL 120 (241)
Q Consensus 55 i~~~l~~la~~~p~~v~~~~iG-~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~ 120 (241)
|.+.++.+++.|...--+.-.| +|.||.++|.-.+.++.-+......++.++.|.+ ||+.|..+
T Consensus 208 ImELINNiAKaHGGySVF~GvGERTREGNDLY~EM~E~gVI~l~~~~SKvaLV~GQM--NePPGARa 272 (521)
T KOG1350|consen 208 IMELINNIAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLEGETSKVALVYGQM--NEPPGARA 272 (521)
T ss_pred HHHHHHHHHHhcCCeEEeeccccccccccHHHHHHHhcCeeeccCCcceEEEEeecc--CCCCCcee
Confidence 6789999999998864444556 8999999987665554322222334566666655 67777653
No 78
>COG0055 AtpD F0F1-type ATP synthase, beta subunit [Energy production and conversion]
Probab=32.79 E-value=49 Score=30.64 Aligned_cols=58 Identities=14% Similarity=0.252 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhCCCCeEEEEee-eeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHH
Q psy17405 55 LTKFLVAAAQQNPSKVKLHSIG-KSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYEL 120 (241)
Q Consensus 55 i~~~l~~la~~~p~~v~~~~iG-~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~ 120 (241)
|.+.+..++.+|...--..=+| +|.||.++|.=...++. ..+++++.|.+ ||+.|..+
T Consensus 164 ~~ELI~Nia~~h~g~SVFaGvGERtREGndLy~Em~es~v------l~ktalv~gQM--NEpPGaR~ 222 (468)
T COG0055 164 IQELINNIAKEHGGYSVFAGVGERTREGNDLYHEMKESGV------LDKTALVFGQM--NEPPGARM 222 (468)
T ss_pred HHHHHHHHHHHcCCeEEEEeccccccchHHHHHHHHhcCC------CCceeEEEeec--CCCCccee
Confidence 4778899999998864444566 89999998765444322 24577788776 67777653
No 79
>PF05127 Helicase_RecD: Helicase; InterPro: IPR007807 This domain is about 350 amino acid residues long and appears to have a P-loop motif, suggesting this is an ATPase. This domain is often N-terminal to a GCN5-related N-acetyltransferase domain IPR000182 from INTERPRO and C-terminal to IPR013562 from INTERPRO.; PDB: 2ZPA_B.
Probab=30.06 E-value=58 Score=26.58 Aligned_cols=31 Identities=23% Similarity=0.235 Sum_probs=24.9
Q ss_pred CCCeEEEEeeecCCCcchHHHHHHHHHHHHH
Q psy17405 100 LKPMFKYVANIHGDEVVGYELMNYLIEYLII 130 (241)
Q Consensus 100 ~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~ 130 (241)
..+.|++...+||.|-.|.-..+.|+.+|-+
T Consensus 113 ~~~~vv~stTi~GYEGtGRgF~lkf~~~L~~ 143 (177)
T PF05127_consen 113 RFPRVVFSTTIHGYEGTGRGFSLKFLKQLKK 143 (177)
T ss_dssp CSSEEEEEEEBSSTTBB-HHHHHHHHCT---
T ss_pred hCCEEEEEeeccccccCCceeeeehhhhccc
Confidence 4578999999999999999999999999865
No 80
>KOG2501|consensus
Probab=28.24 E-value=2e+02 Score=23.04 Aligned_cols=67 Identities=21% Similarity=0.279 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHHHHHhc-
Q psy17405 54 ELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEYLIIND- 132 (241)
Q Consensus 54 ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~~- 132 (241)
.+.+++.++.+++ .++.++-||.+.. ...+.+++....
T Consensus 54 ~Lk~fYe~l~~~~---------------~~fEVvfVS~D~~--------------------------~~~~~~y~~~~~~ 92 (157)
T KOG2501|consen 54 ILKDFYEELKDNA---------------APFEVVFVSSDRD--------------------------EESLDEYMLEHHG 92 (157)
T ss_pred hHHHHHHHHHhcC---------------CceEEEEEecCCC--------------------------HHHHHHHHHhcCC
Confidence 4677777777764 3788888887654 233344443321
Q ss_pred ------CCCHHHHHhhcCceEEEEe---ccCccccccc
Q psy17405 133 ------GTDERVTRLINTTDIFIIP---SLNPDGYSAA 161 (241)
Q Consensus 133 ------~~~~~~~~ll~~~~v~ivP---~~NPDG~~~~ 161 (241)
-.|+...++.+++.+--|| ++||||-...
T Consensus 93 ~W~~iPf~d~~~~~l~~ky~v~~iP~l~i~~~dG~~v~ 130 (157)
T KOG2501|consen 93 DWLAIPFGDDLIQKLSEKYEVKGIPALVILKPDGTVVT 130 (157)
T ss_pred CeEEecCCCHHHHHHHHhcccCcCceeEEecCCCCEeh
Confidence 1366777777777776665 5799997765
No 81
>KOG4088|consensus
Probab=27.75 E-value=20 Score=28.18 Aligned_cols=24 Identities=17% Similarity=0.075 Sum_probs=16.0
Q ss_pred eEEEEeeecCCCcchHHHHHHHHH
Q psy17405 103 MFKYVANIHGDEVVGYELMNYLIE 126 (241)
Q Consensus 103 ~v~i~agiHg~E~~g~~~~~~l~~ 126 (241)
-+|-+.--|++-+.|+++-.+++.
T Consensus 124 pLftvsv~h~G~~~gpwissE~lA 147 (167)
T KOG4088|consen 124 PLFTVSVSHGGLATGPWISSETLA 147 (167)
T ss_pred ccEEEEecCCCcccCCcccHHHHH
Confidence 466777888887777765544443
No 82
>TIGR02867 spore_II_P stage II sporulation protein P. Stage II sporulation protein P is a protein of the endospore formation program in a number of lineages in the Firmicutes (low-GC Gram-positive bacteria). It is expressed in the mother cell compartment, under control of Sigma-E. SpoIIP, along with SpoIIM and SpoIID, is one of three major proteins involved in engulfment of the forespore by the mother cell. This protein family is named for the single member in Bacillus subtilis, although most sporulating bacteria have two members.
Probab=27.41 E-value=3.4e+02 Score=22.48 Aligned_cols=73 Identities=11% Similarity=0.013 Sum_probs=45.6
Q ss_pred CCCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCCCeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHHHH
Q psy17405 48 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLIEY 127 (241)
Q Consensus 48 ~y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~Gr~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~~~ 127 (241)
.-.+|....+.++++.+++|++--+..|-+....+......|....- .+..|++|.-|++-- .-+.|+..
T Consensus 62 y~~sY~~Sr~tv~~~l~~~p~i~~viDiHRDs~~~~~~t~~inG~~~------Aki~fVvG~~np~~~----~N~~fA~~ 131 (196)
T TIGR02867 62 YEQSYDRSRETVKKALKENKDLKYIIDLHRDSVRRKKTTVNINGESV------AKVMFVIGKNNPHFE----KNLQLANK 131 (196)
T ss_pred HHHHHHHHHHHHHHHHHHCCCceEEEEeecCCCCCCcceEEECCEEE------EEEEEEEcCCCCCHH----HHHHHHHH
Confidence 35677888899999999999876667776654444555555554321 345677776664433 34444444
Q ss_pred HHH
Q psy17405 128 LII 130 (241)
Q Consensus 128 L~~ 130 (241)
|..
T Consensus 132 l~~ 134 (196)
T TIGR02867 132 LHA 134 (196)
T ss_pred HHH
Confidence 443
No 83
>PF07454 SpoIIP: Stage II sporulation protein P (SpoIIP); InterPro: IPR010897 This family contains the bacterial stage II sporulation protein P (SpoIIP) (approximately 350 residues long). It has been shown that a block in polar cytokinesis in Bacillus subtilis is mediated partly by transcription of spoIID, spoIIM and spoIIP. This inhibition of polar division is involved in the locking in of asymmetry after the formation of a polar septum during sporulation []. SpoIIP is one of the three genes (spoIID, spoIIM and spoIIP, [, , ]), under the control of sigma E, that have been shown to be essential for the engulfment of the forespore by the mother cell. Their products are involved in degradation of the septal peptidoglycan and mutations in spoIID, spoIIM or spoIIP block sporulation at morphological stage II, prior to the stage of engulfment. These three genes are absolutely conserved (sometimes even duplicated) in all endospore formers [].
Probab=27.41 E-value=2.9e+02 Score=24.12 Aligned_cols=79 Identities=13% Similarity=0.036 Sum_probs=53.8
Q ss_pred CCCCCHHHHHHHHHHHHHhCCCCeEEEEeeeeCCC-CeeEEEEEecCCCCCCCCCCCeEEEEeeecCCCcchHHHHHHHH
Q psy17405 47 PHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQN-RDLWALQISRNVASGRNLLKPMFKYVANIHGDEVVGYELMNYLI 125 (241)
Q Consensus 47 ~~y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~~G-r~i~~~~is~~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~l~ 125 (241)
..-.+|....+.++++.+++|++--+..|-+.-.. |....+.|....- .++.||+|.-|.+=----..+..+.
T Consensus 138 ~y~~sY~~Sr~tv~~~l~~~p~i~~~iDiHRDs~~~~~~~t~~InG~~~------Aki~fVvG~~np~~~~N~~fA~~l~ 211 (268)
T PF07454_consen 138 SYNQSYKRSRETVKKALKENPDIKVVIDIHRDSVPDREKTTTTINGKNY------AKIMFVVGRDNPNWEKNLAFAKQLH 211 (268)
T ss_pred hhHHHHHHHHHHHHHHHHHCCCceEEEEecCCCCCccccceEEECCEEe------eEEEEEEcCCCCCHHHHHHHHHHHH
Confidence 45567889999999999999997667777765444 7777888875432 4678888888776433333444444
Q ss_pred HHHHHh
Q psy17405 126 EYLIIN 131 (241)
Q Consensus 126 ~~L~~~ 131 (241)
..+-+.
T Consensus 212 ~~~~~~ 217 (268)
T PF07454_consen 212 AKLEKK 217 (268)
T ss_pred HHHHhH
Confidence 444433
No 84
>PF13174 TPR_6: Tetratricopeptide repeat; PDB: 3QKY_A 2XEV_A 3URZ_B 2Q7F_A.
Probab=27.40 E-value=85 Score=16.66 Aligned_cols=18 Identities=17% Similarity=0.482 Sum_probs=15.5
Q ss_pred CHHHHHHHHHHHHHhCCC
Q psy17405 51 SFDELTKFLVAAAQQNPS 68 (241)
Q Consensus 51 ty~ei~~~l~~la~~~p~ 68 (241)
.+++..+.++++.++||+
T Consensus 15 ~~~~A~~~~~~~~~~~P~ 32 (33)
T PF13174_consen 15 DYDEAIEYFQRLIKRYPD 32 (33)
T ss_dssp HHHHHHHHHHHHHHHSTT
T ss_pred CHHHHHHHHHHHHHHCcC
Confidence 358889999999999996
No 85
>PF11943 DUF3460: Protein of unknown function (DUF3460); InterPro: IPR021853 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 70 amino acids in length. This protein has a conserved WDK sequence motif.
Probab=25.52 E-value=58 Score=21.70 Aligned_cols=18 Identities=28% Similarity=0.449 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHhCCCCe
Q psy17405 53 DELTKFLVAAAQQNPSKV 70 (241)
Q Consensus 53 ~ei~~~l~~la~~~p~~v 70 (241)
+|+.+||++|.+++|++.
T Consensus 5 Se~TqFl~~lk~~~Pele 22 (60)
T PF11943_consen 5 SEITQFLNQLKAKHPELE 22 (60)
T ss_pred CHHHHHHHHHHHhCCchH
Confidence 589999999999999864
No 86
>TIGR02722 lp_ uncharacterized proteobacterial lipoprotein. Members of this protein family are restricted to the Proteobacteria, and all are predicted lipoproteins. In genomes that contain the thiK gene for the salvage enzyme thiamin kinase, the member of this family is encoded nearby.
Probab=25.35 E-value=2.7e+02 Score=22.72 Aligned_cols=15 Identities=20% Similarity=0.408 Sum_probs=9.8
Q ss_pred HHHHHHHHHHhccCC
Q psy17405 19 ISLCFLLCWVGCTTP 33 (241)
Q Consensus 19 ~~l~l~~~~~~~~~~ 33 (241)
.++++++.++||..+
T Consensus 7 ~~~~~al~l~gC~~~ 21 (189)
T TIGR02722 7 FVALLALLLSGCVSQ 21 (189)
T ss_pred HHHHHHHHHccCCCC
Confidence 345556667899764
No 87
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=24.70 E-value=71 Score=25.24 Aligned_cols=25 Identities=12% Similarity=-0.059 Sum_probs=20.9
Q ss_pred cHHHHHHHHHHHhCCCeEEEEecCC
Q psy17405 208 EPETLAMISFIKNNPFVLSGNLHGK 232 (241)
Q Consensus 208 epEt~al~~~~~~~~~~~~idlH~g 232 (241)
..=.+.+.+++++++||+.|..|--
T Consensus 75 ~~~~~~l~~~l~~~~PD~IIsThp~ 99 (169)
T PF06925_consen 75 RLFARRLIRLLREFQPDLIISTHPF 99 (169)
T ss_pred HHHHHHHHHHHhhcCCCEEEECCcc
Confidence 3346789999999999999999964
No 88
>PF15240 Pro-rich: Proline-rich
Probab=22.79 E-value=81 Score=25.83 Aligned_cols=25 Identities=16% Similarity=0.147 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHhccCCceecCCC
Q psy17405 16 YIAISLCFLLCWVGCTTPVLVNNDP 40 (241)
Q Consensus 16 ~~~~~l~l~~~~~~~~~~~~~~~~~ 40 (241)
|++|+++|+++..|..+...+..+.
T Consensus 3 lVLLSvALLALSSAQ~~dEdv~~e~ 27 (179)
T PF15240_consen 3 LVLLSVALLALSSAQSTDEDVSQEE 27 (179)
T ss_pred hHHHHHHHHHhhhcccccccccccc
Confidence 4567777777777776554444443
No 89
>PRK10319 N-acetylmuramoyl-l-alanine amidase I; Provisional
Probab=20.61 E-value=3.4e+02 Score=23.88 Aligned_cols=22 Identities=9% Similarity=0.072 Sum_probs=17.6
Q ss_pred HHHHHHHHhCCCeEEEEecCCC
Q psy17405 212 LAMISFIKNNPFVLSGNLHGKK 233 (241)
Q Consensus 212 ~al~~~~~~~~~~~~idlH~g~ 233 (241)
....++.++.+.+++|++|--+
T Consensus 115 ~~R~~~An~~~ADlFISIH~Ns 136 (287)
T PRK10319 115 YDRVEIAHKHGADLFMSIHADG 136 (287)
T ss_pred HHHHHHHHhcCCCEEEEecCCC
Confidence 4556778889999999999654
Done!