Query psy17408
Match_columns 96
No_of_seqs 116 out of 1028
Neff 6.0
Searched_HMMs 29240
Date Fri Aug 16 21:44:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17408.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17408hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v38_A Carboxypeptidase T; hyd 99.9 3.5E-27 1.2E-31 180.5 6.5 90 5-95 111-217 (326)
2 3dgv_A TAFI, carboxypeptidase 99.9 9.2E-27 3.2E-31 182.5 5.9 89 5-96 201-302 (401)
3 3mn8_A LP15968P; catalytic dom 99.9 5.5E-25 1.9E-29 173.4 5.6 89 5-96 143-231 (435)
4 3prt_A Carboxypeptidase T; hyd 99.9 2.4E-23 8.3E-28 157.9 6.5 90 5-95 111-217 (323)
5 1kwm_A Procarboxypeptidase B; 99.9 3.1E-23 1E-27 161.8 5.8 88 5-95 203-302 (402)
6 1dtd_A Carboxypeptidase A2; ca 99.9 2.4E-23 8.2E-28 156.4 5.0 88 5-95 104-203 (303)
7 1z5r_A Procarboxypeptidase B; 99.9 3E-23 1E-27 155.9 5.5 88 5-95 108-207 (306)
8 1aye_A PCPA2, procarboxypeptid 99.9 2.2E-23 7.6E-28 162.7 4.9 88 5-95 203-301 (401)
9 2c1c_A Carboxypeptidase B; ins 99.9 3.7E-23 1.3E-27 155.7 4.5 88 5-95 104-206 (312)
10 1m4l_A Carboxypeptidase A; met 99.9 4.4E-23 1.5E-27 155.4 4.9 88 5-95 111-209 (307)
11 3d4u_A Tafia, carboxypeptidase 99.9 9E-23 3.1E-27 153.2 5.8 88 5-95 109-209 (309)
12 2bo9_A Carboxypeptidase A4; me 99.9 2.1E-22 7.2E-27 151.3 4.5 88 5-95 110-208 (308)
13 2boa_A Carboxypeptidase A4; me 99.9 2.8E-22 9.5E-27 156.5 4.9 88 5-95 206-304 (404)
14 1pca_A Procarboxypeptidase A P 99.9 4.1E-23 1.4E-27 161.4 0.0 88 5-95 206-304 (403)
15 1jqg_A Carboxypeptidase A; Pro 99.8 6.8E-22 2.3E-26 155.7 5.8 86 5-93 219-317 (433)
16 1h8l_A Carboxypeptidase GP180 99.8 2.2E-21 7.7E-26 149.6 5.6 79 5-95 113-191 (380)
17 2nsm_A Carboxypeptidase N cata 99.8 5.2E-22 1.8E-26 155.9 1.8 88 5-95 110-210 (439)
18 1uwy_A Carboxypeptidase M; met 99.8 9.3E-21 3.2E-25 148.6 5.3 79 5-95 108-186 (426)
19 4axv_A MPAA; hydrolase; HET: M 99.7 3E-17 1E-21 119.5 5.4 71 24-94 92-175 (243)
20 3b2y_A Metallopeptidase contai 99.5 3.3E-15 1.1E-19 111.5 0.8 61 24-95 116-184 (275)
21 2qvp_A Uncharacterized protein 99.5 1.4E-14 4.9E-19 107.2 2.7 65 24-95 115-185 (275)
22 3l2n_A Peptidase M14, carboxyp 99.5 2E-14 7E-19 112.4 3.5 54 25-94 234-287 (395)
23 3k2k_A Putative carboxypeptida 99.5 2.5E-14 8.6E-19 112.1 3.5 54 25-94 243-296 (403)
24 4a37_A Metallo-carboxypeptidas 99.4 9.7E-14 3.3E-18 108.1 4.1 54 25-94 229-282 (388)
25 3fmc_A Putative succinylglutam 98.7 2.3E-09 7.9E-14 82.9 2.1 69 22-92 86-182 (368)
26 2qj8_A MLR6093 protein; struct 98.3 8.8E-07 3E-11 66.9 5.7 56 24-93 94-153 (332)
27 3cdx_A Succinylglutamatedesucc 98.1 2.6E-06 9E-11 65.0 5.4 55 25-93 103-161 (354)
28 3na6_A Succinylglutamate desuc 97.1 0.00084 2.9E-08 50.8 5.7 48 24-86 98-149 (331)
29 1yw6_A Succinylglutamate desuc 96.4 0.0043 1.5E-07 46.9 5.2 51 24-85 98-155 (335)
30 2gu2_A ASPA protein; aspartoac 95.2 0.0065 2.2E-07 45.5 1.5 51 25-84 60-117 (312)
31 2bco_A Succinylglutamate desuc 94.8 0.03 1E-06 42.5 4.4 46 25-85 104-158 (350)
32 1yw4_A Succinylglutamate desuc 94.3 0.027 9.3E-07 42.6 3.1 49 25-86 97-153 (341)
33 3nh4_A Aspartoacylase-2; merca 90.0 0.2 6.8E-06 38.1 3.0 50 25-84 70-127 (327)
34 1fex_A TRF2-interacting telome 37.3 28 0.00097 19.6 2.7 20 54-73 1-20 (59)
35 1ews_A RK-1 defensin, alpha-de 34.0 14 0.00047 18.6 0.8 15 3-20 7-21 (32)
36 1ayg_A Cytochrome C-552; elect 32.4 32 0.0011 19.2 2.4 17 57-73 63-79 (80)
37 2d0s_A Cytochrome C, cytochrom 31.3 38 0.0013 18.7 2.6 18 56-73 61-78 (79)
38 1a56_A C-551, ferricytochrome 30.9 31 0.001 19.3 2.1 18 56-73 63-80 (81)
39 1c75_A Cytochrome C-553; heme, 30.6 43 0.0015 18.2 2.7 21 52-73 50-70 (71)
40 2odf_A AGR_C_3887P, hypothetic 30.3 58 0.002 23.4 4.0 55 32-86 86-158 (257)
41 3arc_L Photosystem II reaction 29.0 16 0.00053 19.3 0.5 10 28-37 5-14 (37)
42 2exv_A Cytochrome C-551; alpha 29.0 39 0.0013 18.6 2.4 17 57-73 65-81 (82)
43 1cch_A Cytochrome C551; electr 27.9 42 0.0014 18.5 2.3 17 57-73 65-81 (82)
44 2zxy_A Cytochrome C552, cytoch 27.7 36 0.0012 18.8 2.1 17 57-73 70-86 (87)
45 1kx2_A Mono-heme C-type cytoch 25.5 40 0.0014 19.0 2.0 17 57-73 64-80 (81)
46 1w66_A Lipoyltransferase; lipo 23.7 37 0.0013 24.1 1.9 15 78-92 81-95 (232)
47 1wve_C 4-cresol dehydrogenase 22.2 63 0.0021 18.1 2.4 18 57-74 57-74 (80)
48 1gdv_A Cytochrome C6; RED ALGA 21.4 55 0.0019 17.9 2.0 17 57-73 64-80 (85)
49 1cno_A Cytochrome C552; electr 21.3 68 0.0023 18.0 2.4 18 57-74 66-83 (87)
50 1c53_A Cytochrome C553; electr 21.3 55 0.0019 18.1 2.0 16 57-72 63-78 (79)
51 1gks_A Cytochrome C551; haloph 21.2 56 0.0019 18.2 2.0 16 57-72 61-76 (78)
52 1cc5_A Cytochrome C5; electron 21.1 53 0.0018 18.8 1.9 16 57-72 67-82 (83)
53 2wsc_J PSAJ, PSI-J, photosyste 20.4 39 0.0013 18.4 1.1 10 33-42 27-36 (44)
No 1
>3v38_A Carboxypeptidase T; hydrolase; HET: GOL; 1.50A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A 3prt_A
Probab=99.94 E-value=3.5e-27 Score=180.48 Aligned_cols=90 Identities=19% Similarity=0.185 Sum_probs=75.6
Q ss_pred cCCCCceeeecCCccCCCccCCCC-----CCCCcCCCCCCCCCCCCC-C----C-CCCCCCCCCCCcHHHHHHHHHHHhC
Q psy17408 5 CDCKSNWLPYEGSCNSLARFVGRN-----NANGVDLNRNFPDQFDSS-S----E-RREQPLNVKKLEPETLAMISFIKNN 73 (96)
Q Consensus 5 ~~~~~~~~a~~~~~~~~~w~~~R~-----N~~GVDLNRNFp~~w~~~-~----~-~~~y~G~~p~SEpEt~Av~~~~~~~ 73 (96)
.|+|+++...+.+. ..+|+++|. +|.|||||||||++|+.. + . ++.|+|+.|+|||||+||++|++++
T Consensus 111 ~NPDG~~~~~~~~~-~r~WRknR~~~~~~~~~GvDLNRNf~~~w~~~~g~s~~pc~~~Y~G~~p~sEpEt~av~~~i~~~ 189 (326)
T 3v38_A 111 INPDGGEYDISSGS-YKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGRSAFSAPETAAMRDFINSR 189 (326)
T ss_dssp SCHHHHHHHHTTSS-CCCCCSCSCCCTTCSCCCCCGGGCSSTTTTCSSSSBSCTTSTTBCCSSTTCSHHHHHHHHHHHHT
T ss_pred ecCChhhccccCCc-cccccccCCCCCCCCcCccccccCCCcccccCCCCCCCCCccccCCCCCCccHHHHHHHHHHHhh
Confidence 46777777665432 257999986 488999999999999742 1 2 3799999999999999999999986
Q ss_pred ------CceEEEEeccCCceEEeeCCCC
Q psy17408 74 ------PFVLSGNLHGGAIVASYPFDDS 95 (96)
Q Consensus 74 ------~~~l~is~Hsg~~~i~yPy~~s 95 (96)
+|+++|++||++++|+|||+++
T Consensus 190 ~~~~~~~~~~~i~~Hs~~~~il~Pyg~~ 217 (326)
T 3v38_A 190 VVGGKQQIKTLITFHTYSELILYPYGYT 217 (326)
T ss_dssp EETTEECEEEEEEEEESSSEEEESCSSC
T ss_pred ccccccCeEEEEEecCCCCEEEecCCCC
Confidence 7999999999999999999986
No 2
>3dgv_A TAFI, carboxypeptidase B2; blood coagulation, fibrinolysis, protein S glycoprotein, hydrolase, metal-binding, metalloprotease, PR secreted, zymogen; HET: NAG NDG FUL BMA; 2.50A {Bos taurus} PDB: 3osl_A 3d68_A* 3d66_A* 3d67_A*
Probab=99.93 E-value=9.2e-27 Score=182.53 Aligned_cols=89 Identities=19% Similarity=0.249 Sum_probs=78.4
Q ss_pred cCCCCceeeecCCccCCCccCCCC-----CCCCcCCCCCCCC-CCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC
Q psy17408 5 CDCKSNWLPYEGSCNSLARFVGRN-----NANGVDLNRNFPD-QFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN 73 (96)
Q Consensus 5 ~~~~~~~~a~~~~~~~~~w~~~R~-----N~~GVDLNRNFp~-~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~ 73 (96)
.|+|+++.+.+++ .+|+++|. ||+|||||||||+ +|+..+. ++.|+|+.|+|||||+||++|++++
T Consensus 201 ~NPDG~~~~~~~~---r~wrknR~~~~~~n~~GvDLNRNf~~~~w~~~g~s~~pc~~~y~G~~p~sepEt~al~~~i~~~ 277 (401)
T 3dgv_A 201 VNVDGYDYTWKKD---RMWRKNRSLHEKNACVGTDLNRNFASKHWCGEGASSSSCSEIYCGTYPESEPEVKAVADFLRRN 277 (401)
T ss_dssp SCHHHHHHHHHTC---TTCCSCCCCCTTCSSCCCCGGGCSCCTTTTSTTCBSCTTSTTBCCSSTTCSHHHHHHHHHHHHT
T ss_pred eccchhhheeccC---cceeecccCCCCCCCCCCChhhcCCccccccccCCCCCcccccCCCCcCcCHHHHHHHHHHHHh
Confidence 4788888887776 45899994 9999999999999 9976432 3799999999999999999999998
Q ss_pred --CceEEEEeccCCceEEeeCCCCC
Q psy17408 74 --PFVLSGNLHGGAIVASYPFDDSK 96 (96)
Q Consensus 74 --~~~l~is~Hsg~~~i~yPy~~s~ 96 (96)
+|+++|++||++++|+|||+++.
T Consensus 278 ~~~~~~~i~lHs~~~~i~yPy~~~~ 302 (401)
T 3dgv_A 278 IKHIKAYISMHSYSQKIVFPYSYSR 302 (401)
T ss_dssp TTTEEEEEEEEESSCEEEESCSSSS
T ss_pred CcCceEEEEEecCCCEEEeCCCCCC
Confidence 79999999999999999999863
No 3
>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster}
Probab=99.91 E-value=5.5e-25 Score=173.40 Aligned_cols=89 Identities=47% Similarity=0.855 Sum_probs=74.2
Q ss_pred cCCCCceeeecCCccCCCccCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccC
Q psy17408 5 CDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGG 84 (96)
Q Consensus 5 ~~~~~~~~a~~~~~~~~~w~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg 84 (96)
.|+|+++.+.++++....|+.+|.|++|||||||||++|...+ .+.|+.|+|||||+||++|+++++|+++++|||+
T Consensus 143 ~NPDG~~~~~~~~r~~~~~~~~R~n~~GvDLNRnf~~~w~~~~---~~~g~~~~sepEt~al~~~~~~~~~~~~idlHs~ 219 (435)
T 3mn8_A 143 MNPDGYALSQEGNCESLPNYVGRGNAANIDLNRDFPDRLEQSH---VHQLRAQSRQPETAALVNWIVSKPFVLSANFHGG 219 (435)
T ss_dssp SCHHHHHTSCTTCSSCCGGGTTTSCTTCCCGGGCSCCTTC-----------CCCSCHHHHHHHHHHTTSCCCEEEEEECS
T ss_pred cCCChhhhhccCccccCCCCCCCccccCCCcccCCCcccCccc---ccCCCCccchHHHHHHHHHHhhcCCEEEEEEeCC
Confidence 5789999998888775555668999999999999999998653 2467789999999999999999999999999999
Q ss_pred CceEEeeCCCCC
Q psy17408 85 AIVASYPFDDSK 96 (96)
Q Consensus 85 ~~~i~yPy~~s~ 96 (96)
+++++|||++++
T Consensus 220 ~~~~~yPy~~~~ 231 (435)
T 3mn8_A 220 AVVASYPYDNSL 231 (435)
T ss_dssp SCEEEESCSCCS
T ss_pred CeEEEcCCCCCc
Confidence 999999999863
No 4
>3prt_A Carboxypeptidase T; hydrolase; 1.66A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A
Probab=99.88 E-value=2.4e-23 Score=157.85 Aligned_cols=90 Identities=19% Similarity=0.186 Sum_probs=74.2
Q ss_pred cCCCCceeeecCCccCCCccCCCC-----CCCCcCCCCCCCCCCCCC-C----C-CCCCCCCCCCCcHHHHHHHHHHHhC
Q psy17408 5 CDCKSNWLPYEGSCNSLARFVGRN-----NANGVDLNRNFPDQFDSS-S----E-RREQPLNVKKLEPETLAMISFIKNN 73 (96)
Q Consensus 5 ~~~~~~~~a~~~~~~~~~w~~~R~-----N~~GVDLNRNFp~~w~~~-~----~-~~~y~G~~p~SEpEt~Av~~~~~~~ 73 (96)
.|+|+++.+.+.++ ...|+++|. +|.|||||||||..|... + . ++.|+|+.|+|||||+||++|+++.
T Consensus 111 ~NPDG~~~~~~~~~-~r~wR~nr~~~~~~~~~GvDLNRnf~~~w~~~~g~s~~p~~~~y~G~~~~sepEt~a~~~~~~~~ 189 (323)
T 3prt_A 111 INPDGGEYDISSGS-YKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGRSAFSAPETAAMRDFINSR 189 (323)
T ss_dssp SCHHHHHHHHTTSS-CCCCCSCSCCCTTCSCCCCCGGGCSSTTTTSSSSSBSCTTSTTBCCSSTTCSHHHHHHHHHHHHT
T ss_pred ecCchheeeeccCC-ccccccCCCCCCCCcccccccccCCCcccCCCCCCCCCCCccccCCCCCCCcHHHHHHHHHHHHh
Confidence 46777777655322 246888875 278999999999999752 2 1 3799999999999999999999998
Q ss_pred ------CceEEEEeccCCceEEeeCCCC
Q psy17408 74 ------PFVLSGNLHGGAIVASYPFDDS 95 (96)
Q Consensus 74 ------~~~l~is~Hsg~~~i~yPy~~s 95 (96)
+++++|+||+++++++|||+++
T Consensus 190 ~~~~~~~~~~~idlHs~~~~~~ypy~~~ 217 (323)
T 3prt_A 190 VVGGKQQIKTLITFHTYSELILYPYSYT 217 (323)
T ss_dssp EETTEECEEEEEEEEESSSEEEESCCSC
T ss_pred hhccccCeEEEEEccCCCceEEecCCCC
Confidence 7999999999999999999975
No 5
>1kwm_A Procarboxypeptidase B; hydrolase; HET: CIT; 1.60A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 3glj_A 1nsa_A 1pba_A
Probab=99.88 E-value=3.1e-23 Score=161.82 Aligned_cols=88 Identities=20% Similarity=0.208 Sum_probs=76.4
Q ss_pred cCCCCceeeecCCccCCCccCCCC-----CCCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC-
Q psy17408 5 CDCKSNWLPYEGSCNSLARFVGRN-----NANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN- 73 (96)
Q Consensus 5 ~~~~~~~~a~~~~~~~~~w~~~R~-----N~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~- 73 (96)
.|+|+++...+++ ..|+++|. ||.|||||||||..|...+. ++.|+|+.|+|||||+||++|+++.
T Consensus 203 ~NPDG~~~~~~~~---r~wrk~R~~~~~~~~~GvDLNRnf~~~w~~~g~s~~pc~~~y~G~~~~sepEt~al~~~~~~~~ 279 (402)
T 1kwm_A 203 LNIDGYIYTWTKS---RFWRKTRSTHTGSSCIGTDPNRNFDAGWCEIGASRNPCDETYCGPAAESEKETKALADFIRNKL 279 (402)
T ss_dssp SCHHHHHHHHHTC---TTCCSCCCCCSSCCCCCCCGGGCSSSSTTSSSCBSCTTSTTBCCSSTTCSHHHHHHHHHHHHTT
T ss_pred eCCcchhhccccc---ceeeccCCCCCCCCCcCcccccCCccccCCCCCCCCCCccccCCCCCCCcHHHHHHHHHHHhhc
Confidence 4677777777665 34888886 69999999999999986532 3799999999999999999999998
Q ss_pred -CceEEEEeccCCceEEeeCCCC
Q psy17408 74 -PFVLSGNLHGGAIVASYPFDDS 95 (96)
Q Consensus 74 -~~~l~is~Hsg~~~i~yPy~~s 95 (96)
++++++++|+++++++|||+++
T Consensus 280 ~~~~~~idlHs~~~~~~~Py~~~ 302 (402)
T 1kwm_A 280 SSIKAYLTIHSYSQMMIYPYSYA 302 (402)
T ss_dssp TTEEEEEEEEESSCEEEESCSSS
T ss_pred cCeeEEEEEeCCCCEEEeCCCCC
Confidence 8999999999999999999975
No 6
>1dtd_A Carboxypeptidase A2; carboxypeptidase A2, leech carboxypeptidase inhibitor, hydrolase/hydrolase inhibitor complex; HET: GLU; 1.65A {Homo sapiens} SCOP: c.56.5.1
Probab=99.88 E-value=2.4e-23 Score=156.37 Aligned_cols=88 Identities=18% Similarity=0.165 Sum_probs=75.8
Q ss_pred cCCCCceeeecCCccCCCccCCCC------CCCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC
Q psy17408 5 CDCKSNWLPYEGSCNSLARFVGRN------NANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN 73 (96)
Q Consensus 5 ~~~~~~~~a~~~~~~~~~w~~~R~------N~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~ 73 (96)
.|+|+++.+.+++ ..|+++|. |+.|||||||||..|...+. ++.|+|+.|+|||||+||++|+++.
T Consensus 104 ~NPDG~~~~~~~~---~~wr~~r~~~~~~~~~~GvDLNRnfp~~w~~~g~s~~p~~~~y~G~~~~sepEt~a~~~~~~~~ 180 (303)
T 1dtd_A 104 TNPDGYVFSQTKN---RMWRKTRSKVSAGSLCVGVDPNRNWDAGFGGPGASSNPCSDSYHGPSANSEVEVKSIVDFIKSH 180 (303)
T ss_dssp SCHHHHHHHHHTC---TTCCSCCCBCTTTCSCBCCCGGGCSSSSTTCTTCBSCTTSTTBCCSSTTCSHHHHHHHHHHHHH
T ss_pred ccCccceeeeccc---cccccCCCCCCCCCCCcCcccCCCCCCcCccCCCCCCCCccccCCCCCCCcHHHHHHHHHHHhC
Confidence 4677777776665 35788875 89999999999999986432 3789999999999999999999998
Q ss_pred -CceEEEEeccCCceEEeeCCCC
Q psy17408 74 -PFVLSGNLHGGAIVASYPFDDS 95 (96)
Q Consensus 74 -~~~l~is~Hsg~~~i~yPy~~s 95 (96)
+++++++||+++++++|||+++
T Consensus 181 ~~~~~~idlHs~~~~~~~Py~~~ 203 (303)
T 1dtd_A 181 GKVKAFIILHSYSQLLMFPYGYK 203 (303)
T ss_dssp CCEEEEEEEEESSCEEEESCSSC
T ss_pred CCeEEEEEeeCCCCeEEeCCCCC
Confidence 8999999999999999999874
No 7
>1z5r_A Procarboxypeptidase B; exopeptidase, hydrolase; 1.40A {Sus scrofa} SCOP: c.56.5.1 PDB: 1zg7_A* 1zg8_A* 1zg9_A* 2jew_A* 2piy_A* 2piz_A* 2pj0_A* 2pj1_A* 2pj2_A* 2pj3_A* 2pj4_A* 2pj5_A* 2pj6_A* 2pj7_A* 2pj8_A* 2pj9_A* 2pja_A* 2pjb_A* 2pjc_A* 1zli_A ...
Probab=99.88 E-value=3e-23 Score=155.85 Aligned_cols=88 Identities=20% Similarity=0.240 Sum_probs=75.8
Q ss_pred cCCCCceeeecCCccCCCccCCCC-----CCCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC-
Q psy17408 5 CDCKSNWLPYEGSCNSLARFVGRN-----NANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN- 73 (96)
Q Consensus 5 ~~~~~~~~a~~~~~~~~~w~~~R~-----N~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~- 73 (96)
.|+|+++...+++ ..|+++|. |+.|||||||||..|...+. ++.|+|+.|+|||||+||++|+++.
T Consensus 108 ~NPDG~~~~~~~~---~~wrk~r~~~~~~~~~GvDLNRnf~~~w~~~g~s~~p~~~~y~G~~~~sepEt~a~~~~~~~~~ 184 (306)
T 1z5r_A 108 LNIDGYIYTWTKN---RMWRKTRSTNAGTTCIGTDPNRNFDAGWCTTGASTDPCDETYCGSAAESEKETKALADFIRNNL 184 (306)
T ss_dssp SCHHHHHHHHHTC---TTCCSCCCBCTTSSCBCCCGGGCSSSSTTSSSCBSCTTSTTBCCSSTTCSHHHHHHHHHHHHTT
T ss_pred eCCchhhheeccc---cccccCCCCCCCCCccCCccCCCCCCCCCCCCCCCCCCccccCCCCCCCcHHHHHHHHHHHHhc
Confidence 4677777777665 34788874 79999999999999986432 3789999999999999999999998
Q ss_pred -CceEEEEeccCCceEEeeCCCC
Q psy17408 74 -PFVLSGNLHGGAIVASYPFDDS 95 (96)
Q Consensus 74 -~~~l~is~Hsg~~~i~yPy~~s 95 (96)
++++++++|+++++++|||+++
T Consensus 185 ~~~~~~idlHs~~~~~~~Py~~~ 207 (306)
T 1z5r_A 185 SSIKAYLTIHSYSQMILYPYSYD 207 (306)
T ss_dssp TTEEEEEEEEESSSEEEESCSSS
T ss_pred cCeEEEEEEeCCCCeEEeCCCCC
Confidence 8999999999999999999874
No 8
>1aye_A PCPA2, procarboxypeptidase A2; serine protease, zymogen, hydrolase; 1.80A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 1o6x_A
Probab=99.88 E-value=2.2e-23 Score=162.68 Aligned_cols=88 Identities=18% Similarity=0.165 Sum_probs=75.8
Q ss_pred cCCCCceeeecCCccCCCccCCC-----CCCCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC-
Q psy17408 5 CDCKSNWLPYEGSCNSLARFVGR-----NNANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN- 73 (96)
Q Consensus 5 ~~~~~~~~a~~~~~~~~~w~~~R-----~N~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~- 73 (96)
.|+|+++...+++ ..|+++| .||.|||||||||..|...+. ++.|+|+.|+|||||+||++|+++.
T Consensus 203 ~NPDG~~~~~~~~---r~wrk~R~~~~~~n~~GvDLNRnfp~~w~~~g~s~~pc~~~y~G~~~~sepEt~al~~~~~~~~ 279 (401)
T 1aye_A 203 TNPDGYVFSQTKN---RMWRKTRSKVSGSLCVGVDPNRNWDAGFGGPGASSNPCSDSYHGPSANSEVEVKSIVDFIKSHG 279 (401)
T ss_dssp SCHHHHHHHHHTC---TTCCSCCCBCTTCSCBCCCGGGCSSSSTTSSSSBCCTTSTTBCCSSTTCSHHHHHHHHHHHHHC
T ss_pred EcCCCceeccccc---ceeccCCCCCCCCcccccccccCCccccccCCCCCCCCccccCCCCCCcCHHHHHHHHHHHccC
Confidence 4677777766654 4588887 489999999999999985432 3789999999999999999999998
Q ss_pred CceEEEEeccCCceEEeeCCCC
Q psy17408 74 PFVLSGNLHGGAIVASYPFDDS 95 (96)
Q Consensus 74 ~~~l~is~Hsg~~~i~yPy~~s 95 (96)
++++++++|+++++++|||+++
T Consensus 280 ~~~~~idlHs~~~~~~~Py~~~ 301 (401)
T 1aye_A 280 KVKAFIILHSYSQLLMFPYGYK 301 (401)
T ss_dssp CEEEEEEEEESSCEEEESCSSS
T ss_pred CEEEEEEEcCCCCEEEeCCCCC
Confidence 8999999999999999999975
No 9
>2c1c_A Carboxypeptidase B; insect, metalloprotease, insensitive, plant inhibitors, hydrolase; 2.3A {Helicoverpa zea} SCOP: c.56.5.1
Probab=99.87 E-value=3.7e-23 Score=155.70 Aligned_cols=88 Identities=17% Similarity=0.136 Sum_probs=75.7
Q ss_pred cCCCCceeeecCCccCCCccCCC--------CCCCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHH
Q psy17408 5 CDCKSNWLPYEGSCNSLARFVGR--------NNANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIK 71 (96)
Q Consensus 5 ~~~~~~~~a~~~~~~~~~w~~~R--------~N~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~ 71 (96)
.|+|+++...++++ .|+++| .|+.|||||||||+.|...+. ++.|+|+.|+|||||+||++|++
T Consensus 104 ~NPDG~~~~~~~~~---~wr~~R~~~~~~~~~~~~GvDLNRnf~~~w~~~g~s~~p~~~~y~G~~~~sepEt~al~~~~~ 180 (312)
T 2c1c_A 104 VNPDGYKYTFTNER---FWRKTRSTNNNPLSQICRGADGNRNFDFVWNSIGTSNSPCSDIYAGTSAFSEVETRVVRDILH 180 (312)
T ss_dssp SCHHHHHHHHHTCT---TCCSCCCCCSSGGGGTSCCCCGGGCSSSSTTSSSCBSCTTSTTBCCSSTTCSHHHHHHHHHHH
T ss_pred ccCccceeeecccc---cccccCCCCCCCccccccCCCcccCCCcCCCCCCCCCCCCccccCCCCCCCCHHHHHHHHHHH
Confidence 46777777766653 478888 469999999999999986432 37899999999999999999999
Q ss_pred hC--CceEEEEeccCCceEEeeCCCC
Q psy17408 72 NN--PFVLSGNLHGGAIVASYPFDDS 95 (96)
Q Consensus 72 ~~--~~~l~is~Hsg~~~i~yPy~~s 95 (96)
+. +++++++||+++++++|||+++
T Consensus 181 ~~~~~~~~~idlHs~~~~~~~P~~~~ 206 (312)
T 2c1c_A 181 EHLARMALYLTMHSFGSMILYPWGHD 206 (312)
T ss_dssp HHGGGEEEEEEEEESSSEEEESCTTT
T ss_pred hccCCeeEEEEEecCCCeEEeCCCCC
Confidence 98 8999999999999999999974
No 10
>1m4l_A Carboxypeptidase A; metalloproteinase, metalloexoproteinase, hydrolase; 1.25A {Bos taurus} SCOP: c.56.5.1 PDB: 1cpx_A 1arl_A 1f57_A 2rfh_A* 3i1u_A* 1arm_A 1ell_P 1elm_P 1ee3_P 1zlh_A 2abz_A 3hlp_A 3huv_A 1yme_A* 3fvl_A* 3fx6_A* 2ctc_A* 1hdq_A 2ctb_A* 3kgq_A* ...
Probab=99.87 E-value=4.4e-23 Score=155.36 Aligned_cols=88 Identities=18% Similarity=0.214 Sum_probs=74.5
Q ss_pred cCCCCceeeecCCccCCCccCCC-----CCCCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC-
Q psy17408 5 CDCKSNWLPYEGSCNSLARFVGR-----NNANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN- 73 (96)
Q Consensus 5 ~~~~~~~~a~~~~~~~~~w~~~R-----~N~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~- 73 (96)
.|+|+++...++++ .|+++| .|+.|||||||||..|...+. ++.|+|+.|+|||||+||++|++..
T Consensus 111 ~NPDG~~~~~~~~r---~wrk~r~~~~~~n~~GvDLNRnf~~~w~~~g~s~~p~~~~y~G~~~~sepEt~al~~~~~~~~ 187 (307)
T 1m4l_A 111 TNPDGFAFTHSQNR---LWRKTRSVTSSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANSEVEVKSIVDFVKDHG 187 (307)
T ss_dssp SCHHHHHHHHHTCT---TCCSCCCBCTTCSCBCCCGGGCSSSSTTSSSSBCCTTSTTBCCSSTTCSHHHHHHHHHHHHHC
T ss_pred ccCccceeeecCCc---ceecCCCCCCCCcccCCCCCCCCCccCcCCCCCCCCCccccCCCCCCCcHHHHHHHHHHHhCC
Confidence 46777777666643 478876 489999999999999985432 3789999999999999999999776
Q ss_pred CceEEEEeccCCceEEeeCCCC
Q psy17408 74 PFVLSGNLHGGAIVASYPFDDS 95 (96)
Q Consensus 74 ~~~l~is~Hsg~~~i~yPy~~s 95 (96)
+++++++||+++++++|||+++
T Consensus 188 ~~~~~idlH~~~~~~~~P~~~~ 209 (307)
T 1m4l_A 188 NFKAFLSIHSYSQLLLYPYGYT 209 (307)
T ss_dssp CEEEEEEEEESSCEEEESCSSC
T ss_pred CeEEEEEEecCCCEEEeCCCCC
Confidence 6999999999999999999875
No 11
>3d4u_A Tafia, carboxypeptidase B2; protease-inhibitor complex, glycoprotein, hydrolase, metal-binding, metalloprotease, protease, secret zymogen; 1.70A {Bos taurus} PDB: 3lms_A
Probab=99.87 E-value=9e-23 Score=153.23 Aligned_cols=88 Identities=19% Similarity=0.241 Sum_probs=74.6
Q ss_pred cCCCCceeeecCCccCCCccCCCC-----CCCCcCCCCCCCC-CCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC
Q psy17408 5 CDCKSNWLPYEGSCNSLARFVGRN-----NANGVDLNRNFPD-QFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN 73 (96)
Q Consensus 5 ~~~~~~~~a~~~~~~~~~w~~~R~-----N~~GVDLNRNFp~-~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~ 73 (96)
.|+|+++...+++ ..|+++|. |+.|||||||||. .|...+. ++.|+|+.|+|||||+||++|+++.
T Consensus 109 ~NPDG~~~~~~~~---~~wr~~R~~~~~~~~~GvDLNRnf~~~~w~~~g~s~~p~~~~y~G~~~~sepEt~a~~~~~~~~ 185 (309)
T 3d4u_A 109 VNVDGYDYTWKKD---RMWRKNRSLHEKNACVGTDLNRNFASKHWCGEGASSSSCSEIYCGTYPESEPEVKAVADFLRRN 185 (309)
T ss_dssp SCHHHHHHHHHTC---TTCCSCCCCCTTCSSCCCCGGGCSCCTTTTSTTSBSCTTSTTBCCSSTTCSHHHHHHHHHHHHT
T ss_pred eccchhheeeccc---ceeecCCCCCCCCCCcCccccCCCChhhcCCCCCCCCCCccccCCCCCCCcHHHHHHHHHHHhc
Confidence 4666666665554 35888886 5999999999999 9975432 3799999999999999999999998
Q ss_pred --CceEEEEeccCCceEEeeCCCC
Q psy17408 74 --PFVLSGNLHGGAIVASYPFDDS 95 (96)
Q Consensus 74 --~~~l~is~Hsg~~~i~yPy~~s 95 (96)
++++++++|+++++++|||+++
T Consensus 186 ~~~~~~~idlH~~~~~~~~Py~~~ 209 (309)
T 3d4u_A 186 IKHIKAYISMHSYSQKIVFPYSYS 209 (309)
T ss_dssp TTTEEEEEEEEESSSEEEESCSSC
T ss_pred ccceEEEEEEeCCCcEEEeCCCCC
Confidence 6999999999999999999874
No 12
>2bo9_A Carboxypeptidase A4; metallocarboxypeptidase, X-RAY endogenous protein inhibitor, metalloprotease carboxypeptidase, hydrolase; HET: NAG; 1.6A {Homo sapiens} SCOP: c.56.5.1 PDB: 4a94_A 2pcu_A*
Probab=99.85 E-value=2.1e-22 Score=151.35 Aligned_cols=88 Identities=19% Similarity=0.191 Sum_probs=73.8
Q ss_pred cCCCCceeeecCCccCCCccCCCC-----CCCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC-
Q psy17408 5 CDCKSNWLPYEGSCNSLARFVGRN-----NANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN- 73 (96)
Q Consensus 5 ~~~~~~~~a~~~~~~~~~w~~~R~-----N~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~- 73 (96)
.|+|+++...+++ ..|+++|. |+.|||||||||..|...+. ++.|+|+.|+|||||+||++|++..
T Consensus 110 ~NPDG~~~~~~~~---r~wr~~r~~~~~~~~~GvDLNRnf~~~w~~~g~s~~p~~~~y~G~~~~sepEt~a~~~~~~~~~ 186 (308)
T 2bo9_A 110 ANPDGYVYTQTQN---RLWRKTRSRNPGSSCIGADPNRNWNASFAGKGASDNPCSEVYHGPHANSEVEVKSVVDFIQKHG 186 (308)
T ss_dssp SCHHHHHHHHHTC---TTCCSCCCBCTTCSSBCCCGGGCSSSSTTSSSSBSCTTSTTBCCSSTTCSHHHHHHHHHHHHHC
T ss_pred ccCccceeeeccc---cceecCCCCCCCCCccCCcCCCCCccccCCCCCCCCCCccccCCCCCCCCHHHHHHHHHHHhCC
Confidence 4677777766654 34788886 49999999999999985432 3799999999999999999999554
Q ss_pred CceEEEEeccCCceEEeeCCCC
Q psy17408 74 PFVLSGNLHGGAIVASYPFDDS 95 (96)
Q Consensus 74 ~~~l~is~Hsg~~~i~yPy~~s 95 (96)
++++++++|+++++++|||+++
T Consensus 187 ~~~~~idlHs~~~~~~~P~~~~ 208 (308)
T 2bo9_A 187 NFKGFIDLHSYSQLLMYPYGYS 208 (308)
T ss_dssp CEEEEEEEEESSSEEEESCSSC
T ss_pred CeEEEEEEecCCcEEEeCCCCC
Confidence 5999999999999999999975
No 13
>2boa_A Carboxypeptidase A4; metalloprocarboxypeptidase, X-RAY zymogen, metalloprotease, exopropeptidase, hydrolase; HET: NAG; 2.20A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1
Probab=99.85 E-value=2.8e-22 Score=156.47 Aligned_cols=88 Identities=19% Similarity=0.191 Sum_probs=74.2
Q ss_pred cCCCCceeeecCCccCCCccCCCC-----CCCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC-
Q psy17408 5 CDCKSNWLPYEGSCNSLARFVGRN-----NANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN- 73 (96)
Q Consensus 5 ~~~~~~~~a~~~~~~~~~w~~~R~-----N~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~- 73 (96)
.|+|+++...+++ ..|+++|. ||.|||||||||..|...+. ++.|+|+.|+|||||+||++|++..
T Consensus 206 ~NPDG~~~~~~~~---r~wrk~R~~~~~~~~~GvDLNRnf~~~w~~~g~s~~pc~e~y~G~~~~sepEt~al~~~~~~~~ 282 (404)
T 2boa_A 206 ANPDGYVYTQTQN---RLWRKTRSRNPGSSCIGADPNRNWNASFAGKGASDNPCSEVYHGPHANSEVEVKSVVDFIQKHG 282 (404)
T ss_dssp SCHHHHHHHHHTC---TTCCSCCCBCTTSSCBCCCGGGCSSSSTTCTTCBSCTTSTTBCCSSTTCSHHHHHHHHHHHHHC
T ss_pred ecCcchhhccccc---ceeecCCCCCCCCCCccccccCCCCccccCCCCCCCCCccccCCCCCCCCHHHHHHHHHHHcCC
Confidence 4677777766654 35888886 69999999999999985432 3799999999999999999999544
Q ss_pred CceEEEEeccCCceEEeeCCCC
Q psy17408 74 PFVLSGNLHGGAIVASYPFDDS 95 (96)
Q Consensus 74 ~~~l~is~Hsg~~~i~yPy~~s 95 (96)
++++++++|+++++++|||+++
T Consensus 283 ~~~~~idlHs~~~~~l~Py~~~ 304 (404)
T 2boa_A 283 NFKGFIDLHSYSQLLMYPYGYS 304 (404)
T ss_dssp CEEEEEEEEESSCEEEESCSSC
T ss_pred CEEEEEEEeCCCCEEEeccCCC
Confidence 4999999999999999999976
No 14
>1pca_A Procarboxypeptidase A PCPA; hydrolase(C-terminal peptidase); HET: CIT; 2.00A {Sus scrofa} SCOP: d.58.3.1 PDB: 1pyt_A
Probab=99.85 E-value=4.1e-23 Score=161.41 Aligned_cols=88 Identities=18% Similarity=0.172 Sum_probs=0.0
Q ss_pred cCCCCceeeecCCccCCCccCCCC-----CCCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC-
Q psy17408 5 CDCKSNWLPYEGSCNSLARFVGRN-----NANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN- 73 (96)
Q Consensus 5 ~~~~~~~~a~~~~~~~~~w~~~R~-----N~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~- 73 (96)
.|+|+++...+++ .+|+++|. ||.|||||||||..|...+. ++.|+|+.|+|||||+||++|++..
T Consensus 206 ~NPDG~~~~~~~~---r~wrk~R~~~~~~n~~GvDLNRnfp~~w~~~g~s~~pc~~~y~G~~~~sepEt~al~~~~~~~~ 282 (403)
T 1pca_A 206 TNPNGFAFTHSDN---RLWRKTRSKASGSLCVGSDSNRNWDAGFGGAGASSSPCAETYHGKYPNSEVEVKSITDFVKNNG 282 (403)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ecCCcceecccCc---cceeccCCCCCCCcccCcccccCCccccccCCCCCCCcccccCCCCCCCcHHHHHHHHHHHhcC
Confidence 5788888876664 35888774 79999999999999985432 3799999999999999999999666
Q ss_pred CceEEEEeccCCceEEeeCCCC
Q psy17408 74 PFVLSGNLHGGAIVASYPFDDS 95 (96)
Q Consensus 74 ~~~l~is~Hsg~~~i~yPy~~s 95 (96)
++++++++|+++++++|||+++
T Consensus 283 ~~~~~idlHs~~~~~~yPy~~~ 304 (403)
T 1pca_A 283 NIKAFISIHSYSQLLLYPYGYK 304 (403)
T ss_dssp ----------------------
T ss_pred CeEEEEEEcCCCCeEEeCCCCC
Confidence 5999999999999999999875
No 15
>1jqg_A Carboxypeptidase A; Pro-protein, hydrolase; 2.50A {Helicoverpa armigera} SCOP: c.56.5.1 d.58.3.1
Probab=99.85 E-value=6.8e-22 Score=155.69 Aligned_cols=86 Identities=21% Similarity=0.218 Sum_probs=74.7
Q ss_pred cCCCCceeeecCCccCCCccCCCC-------CCCCcCCCCCCCCCCCCCC---C-CCCCCCCCCCCcHHHHHHHHHHHhC
Q psy17408 5 CDCKSNWLPYEGSCNSLARFVGRN-------NANGVDLNRNFPDQFDSSS---E-RREQPLNVKKLEPETLAMISFIKNN 73 (96)
Q Consensus 5 ~~~~~~~~a~~~~~~~~~w~~~R~-------N~~GVDLNRNFp~~w~~~~---~-~~~y~G~~p~SEpEt~Av~~~~~~~ 73 (96)
.|+|+++...+++ ..|+++|. ||.|||||||||+.|...+ . ++.|+|+.|+|||||+||++|+.+.
T Consensus 219 ~NPDG~~~~~~~~---r~wrk~R~~~~~~~~~~~GvDLNRnf~~~w~~~Gs~~pc~e~y~G~~~~sepEt~al~~~~~~~ 295 (433)
T 1jqg_A 219 ANPDGYVHTFGGD---RYWRKNRATGYMAGNLCMGVDLNRNFGMNWGTASSSSVCSDTFHGRSAFSEPESSVIRDIIAEH 295 (433)
T ss_dssp SCHHHHHHHHSSC---TTCCSCCCCSSSGGGSSCCCCGGGCSSTTTTSSSBCCTTSTTBCCSSTTCSHHHHHHHHHHHHT
T ss_pred ecCccchhcccCc---cccccCCCCCCCCCCCCcCcccccCCccccCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHh
Confidence 4677777776664 45899987 4999999999999998543 2 3789999999999999999999998
Q ss_pred --CceEEEEeccCCceEEeeCC
Q psy17408 74 --PFVLSGNLHGGAIVASYPFD 93 (96)
Q Consensus 74 --~~~l~is~Hsg~~~i~yPy~ 93 (96)
++++++++|+++++++|||+
T Consensus 296 ~~~~~~~idlHs~~~~~~~Py~ 317 (433)
T 1jqg_A 296 RNRMALYLDIHSFGSMILYGYG 317 (433)
T ss_dssp TTTEEEEEEEEESSSEEEESCT
T ss_pred cCCeEEEEEEcCCCCEEEeCCC
Confidence 89999999999999999998
No 16
>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*
Probab=99.83 E-value=2.2e-21 Score=149.63 Aligned_cols=79 Identities=52% Similarity=0.817 Sum_probs=70.0
Q ss_pred cCCCCceeeecCCccCCCccCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccC
Q psy17408 5 CDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGG 84 (96)
Q Consensus 5 ~~~~~~~~a~~~~~~~~~w~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg 84 (96)
.|+|+++...++++ .|+++|.|+.|||||||||..|... ...|||||+||++|+++.+++++++||++
T Consensus 113 ~NPDG~~~~~~~~~---~w~k~R~n~~GvDLNRnf~~~~~~~---------~~~sepEt~a~~~~~~~~~~~~~idlH~~ 180 (380)
T 1h8l_A 113 MNPDGYEKSQEGDR---GGTVGRNNSNNYDLNRNFPDQFFQV---------TDPPQPETLAVMSWLKTYPFVLSANLHGG 180 (380)
T ss_dssp SCHHHHHTCCTTCS---SCCTTTSCTTSCCGGGCSCCSSSCC---------CSCCCHHHHHHHHHHHHSCEEEEEEEECS
T ss_pred cCCccceecccCCC---CccCCCCCCCCCcccCCCccccccc---------CCCCChHHHHHHHHHHhCCceEEEEEecC
Confidence 47788888877764 5899999999999999999999742 23499999999999999999999999999
Q ss_pred CceEEeeCCCC
Q psy17408 85 AIVASYPFDDS 95 (96)
Q Consensus 85 ~~~i~yPy~~s 95 (96)
+++++|||+++
T Consensus 181 ~~~~~~py~~~ 191 (380)
T 1h8l_A 181 SLVVNYPFDDD 191 (380)
T ss_dssp EEEEEESCSCC
T ss_pred CEEEEecCCCC
Confidence 99999999975
No 17
>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens}
Probab=99.83 E-value=5.2e-22 Score=155.88 Aligned_cols=88 Identities=45% Similarity=0.683 Sum_probs=71.1
Q ss_pred cCCCCceeeecCCccCCCccCCCCCCCCcCCCCCCCC----CCCC-----CC---C-CCCCCCCCCCCcHHHHHHHHHHH
Q psy17408 5 CDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPD----QFDS-----SS---E-RREQPLNVKKLEPETLAMISFIK 71 (96)
Q Consensus 5 ~~~~~~~~a~~~~~~~~~w~~~R~N~~GVDLNRNFp~----~w~~-----~~---~-~~~y~G~~p~SEpEt~Av~~~~~ 71 (96)
.|+|+++.+..+.....+|+++|.|++|||||||||+ .|.. .. . ++.|.|+ |||||+||++|++
T Consensus 110 ~NPDG~~~~~~~~~~~~~wr~~R~n~~GvDLNRnf~~~~~~~w~~~~~g~~~~~~p~~~~y~g~---sepEt~al~~~~~ 186 (439)
T 2nsm_A 110 MNPDGYEVAAAQGPNKPGYLVGRNNANGVDLNRNFPDLNTYIYYNEKYGGPNHHLPLPDNWKSQ---VEPETRAVIRWMH 186 (439)
T ss_dssp SCHHHHHHHHHTTTTCCTTTTTCSCTTSCCGGGCSCCCHHHHHHHHHHCCCCSCCCCCTTHHHH---SCHHHHHHHHHHH
T ss_pred cCCChHHhhcccCCccCcccCCccCCCCCcccccCcccchhhccccccCCcccCCCCccccCCC---CCHHHHHHHHHHH
Confidence 4778887765543344679999999999999999999 4421 10 1 2455553 9999999999999
Q ss_pred hCCceEEEEeccCCceEEeeCCCC
Q psy17408 72 NNPFVLSGNLHGGAIVASYPFDDS 95 (96)
Q Consensus 72 ~~~~~l~is~Hsg~~~i~yPy~~s 95 (96)
+++|++++++|+++++++|||+++
T Consensus 187 ~~~~~~~idlHs~~~~~~yPy~~~ 210 (439)
T 2nsm_A 187 SFNFVLSANLHGGAVVANYPYDKS 210 (439)
T ss_dssp HSCEEEEEEEECSEEEEEESCCSC
T ss_pred hCCcEEEEEcccCCEEEEecCCCC
Confidence 999999999999999999999985
No 18
>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1
Probab=99.81 E-value=9.3e-21 Score=148.57 Aligned_cols=79 Identities=47% Similarity=0.753 Sum_probs=70.6
Q ss_pred cCCCCceeeecCCccCCCccCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccC
Q psy17408 5 CDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGG 84 (96)
Q Consensus 5 ~~~~~~~~a~~~~~~~~~w~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg 84 (96)
.|+|+++.+.++++. |+.+|.|+.|||||||||..|.. ..|++||||+||++|+++.++++++++|++
T Consensus 108 ~NPDG~~~~~~~~~~---w~~~R~n~~GvDLNRnf~~~w~~---------~~~~sepEt~al~~~~~~~~~~~~idlHs~ 175 (426)
T 1uwy_A 108 MNPDGFEAVKKPDCY---YSIGRENYNQYDLNRNFPDAFEY---------NNVSRQPETVAVMKWLKTETFVLSANLHGG 175 (426)
T ss_dssp SCHHHHHHCSSCCSS---CCSCSSCTTSCCTTSCSCCSSSC---------CCCCCCHHHHHHHHHHHHSCEEECCEEECS
T ss_pred eccchhheeeccCcc---cCCCCCCCcCCCCCCCCCCCCCc---------CCccccHHHHHHHHHHhccCeEEEEEEcCC
Confidence 478888888777643 78999999999999999999963 257899999999999999999999999999
Q ss_pred CceEEeeCCCC
Q psy17408 85 AIVASYPFDDS 95 (96)
Q Consensus 85 ~~~i~yPy~~s 95 (96)
+++++|||+++
T Consensus 176 ~~~~~~Py~~~ 186 (426)
T 1uwy_A 176 ALVASYPFDNG 186 (426)
T ss_dssp EEEEEESCSSC
T ss_pred CeEEEccCCCC
Confidence 99999999986
No 19
>4axv_A MPAA; hydrolase; HET: MSE; 2.17A {Vibrio harveyi}
Probab=99.68 E-value=3e-17 Score=119.53 Aligned_cols=71 Identities=31% Similarity=0.406 Sum_probs=61.3
Q ss_pred cCCCCCCCCcCCCCCCCCC-CCCC---------C---CCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccCCceEEe
Q psy17408 24 FVGRNNANGVDLNRNFPDQ-FDSS---------S---ERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASY 90 (96)
Q Consensus 24 ~~~R~N~~GVDLNRNFp~~-w~~~---------~---~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg~~~i~y 90 (96)
+..|.|++|||||||||.. |... . .+..|+|+.|+|||||+||++++.+.++.+++++|++++++.|
T Consensus 92 ~~~r~~~~g~dlNR~fp~~~~~~~~~~~~~~~~~~~~~~~~y~G~~~~sePEt~Al~~~i~~~~~~~~islHs~~~~i~~ 171 (243)
T 4axv_A 92 LGTRANANQVDLNRAFPTQNWTEHGTVYRWSSHTPVRDVKVKTGDKEQLEPEVDALISLIELRRPKFVVSFHEPLAFVDD 171 (243)
T ss_dssp TTCSSCTTSBCGGGCSCCTTCCSCCEEECSSTTCSSCCEEEBCCBTTBCCHHHHHHHHHHHHHCCSCEEEEECSSCEEEC
T ss_pred hccccCCCCCChhhcCCCCCccccccccccccCCCCCChhhcCCCCCcCCHHHHHHHHHHHhhCCcEEEEecCCcccccC
Confidence 5689999999999999975 3221 1 1257999999999999999999999999999999999999999
Q ss_pred eCCC
Q psy17408 91 PFDD 94 (96)
Q Consensus 91 Py~~ 94 (96)
|++.
T Consensus 172 p~~~ 175 (243)
T 4axv_A 172 PAHS 175 (243)
T ss_dssp SSSC
T ss_pred Ccch
Confidence 9864
No 20
>3b2y_A Metallopeptidase containing CO-catalytic metalloa site; metallopeptidase containing CO-catalytic metalloactive site; 1.74A {Shewanella denitrificans OS217} PDB: 3ieh_A*
Probab=99.49 E-value=3.3e-15 Score=111.53 Aligned_cols=61 Identities=16% Similarity=0.049 Sum_probs=45.8
Q ss_pred cCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHH-------HHHHHHHHhCCceEEEEeccC-CceEEeeCCCC
Q psy17408 24 FVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPET-------LAMISFIKNNPFVLSGNLHGG-AIVASYPFDDS 95 (96)
Q Consensus 24 ~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt-------~Av~~~~~~~~~~l~is~Hsg-~~~i~yPy~~s 95 (96)
+++|.|+.|||||||||..| +.|+||||| +|+++|+++.++++++++|++ +....|+|+++
T Consensus 116 ~~~R~n~~gvDLNRnf~~~~-----------~~~~sepEt~~l~~~~~a~~~~~~~~~~~~~id~H~~~~~~g~y~~~~~ 184 (275)
T 3b2y_A 116 AGHRFNRFGENPNRGFTLEN-----------GKPTPNEHTSLEGKLLLEHAQLLCAASRDGILTCHEDVLMNETYVYSFE 184 (275)
T ss_dssp TTSSSCTTSCCTTSCCCC--------------------CCCHHHHHHHTTHHHHHHHTTTEEEEEEEETTCSSBEEEEEC
T ss_pred cCccCCCCCCccCcCCCCCC-----------CCCCCCCCccccchHHHHHHHHHHhcCCcEEEECCCCCcCCeEEecCCC
Confidence 56788999999999999987 357899999 999999999999999999998 55556777654
No 21
>2qvp_A Uncharacterized protein; putative metallopeptidase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 2.00A {Shewanella amazonensis}
Probab=99.46 E-value=1.4e-14 Score=107.23 Aligned_cols=65 Identities=17% Similarity=0.016 Sum_probs=52.8
Q ss_pred cCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHh---CCceEEEEeccC---CceEEeeCCCC
Q psy17408 24 FVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKN---NPFVLSGNLHGG---AIVASYPFDDS 95 (96)
Q Consensus 24 ~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~---~~~~l~is~Hsg---~~~i~yPy~~s 95 (96)
+.+|.|+.|||||||||..|... |..+.+||||+|+++|++. .+++++++||++ .+.++|||+++
T Consensus 115 ~~~R~n~~g~DlNR~f~~~~~~~-------~~~~~~~pE~~a~~~~~~~~~~~~~~~~idlHs~~~~~~~~~~~~~~~ 185 (275)
T 2qvp_A 115 KGHRFNELGENPNRGFFIENGKA-------KPGADTSAEGRILLEHAHLLQVASRDGILTCHEDVLMTDTYVYTFEPS 185 (275)
T ss_dssp HTCSSCTTSCCTTSCCEEETTEE-------ECCTTCCHHHHHHHHTHHHHHHHTTTCEEEEEEETTCSSBEEEEECSS
T ss_pred cccccCCCCccCCCCCCcccccC-------CCCCCCcHHHHHHHHHHHHhccCCceEEEEecCCCCCCCeEEecCCCC
Confidence 45789999999999999877621 2334589999999999643 579999999998 58899999865
No 22
>3l2n_A Peptidase M14, carboxypeptidase A; putative carboxypeptidase A, structural genomics, joint CENT structural genomics, JCSG; 2.39A {Shewanella denitrificans}
Probab=99.46 E-value=2e-14 Score=112.35 Aligned_cols=54 Identities=24% Similarity=0.301 Sum_probs=49.1
Q ss_pred CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccCCceEEeeCCC
Q psy17408 25 VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDD 94 (96)
Q Consensus 25 ~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg~~~i~yPy~~ 94 (96)
.+|.|+.||||||||| |+.|+|||||+||++++++.+++++|++|++++ +||++
T Consensus 234 ~~R~n~~GvDLNRnf~-------------g~~~~sepEt~a~~~~l~~~~~~~~iDlHs~~~---~p~~f 287 (395)
T 3l2n_A 234 HLRTNAVGANLNREWQ-------------TPSLERSPEVYYVVNKMHETGVDLFYDVHGDEG---LPYVF 287 (395)
T ss_dssp CSSCCTTSCCGGGCSS-------------SCCTTTCHHHHHHHHHHHHHCCSEEEEEEEESS---CSSBE
T ss_pred ccccccCCCCcccccC-------------CCCcCCCHHHHHHHHHHHhCCCcEEEEeccCCC---CCceE
Confidence 3689999999999998 467899999999999999999999999999999 48875
No 23
>3k2k_A Putative carboxypeptidase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.49A {Burkholderia mallei atcc 23344}
Probab=99.45 E-value=2.5e-14 Score=112.09 Aligned_cols=54 Identities=28% Similarity=0.275 Sum_probs=49.2
Q ss_pred CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccCCceEEeeCCC
Q psy17408 25 VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDD 94 (96)
Q Consensus 25 ~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg~~~i~yPy~~ 94 (96)
.+|.|+.||||||||| |+.|+|||||+||++++++.++++++++|++++ +||++
T Consensus 243 ~~R~n~~GvDLNRnf~-------------~~~~~sepEt~al~~~~~~~~~~~~iDlHs~~~---~P~~f 296 (403)
T 3k2k_A 243 NLRTNAAGANLNREWM-------------EPDAERSPEVLVVRDAIHAIGCDLFFDIHGDED---LPYVF 296 (403)
T ss_dssp CSSCCTTSCCGGGCSS-------------SCCTTTCHHHHHHHHHHHHHCCSEEEEEEEESS---CCSBE
T ss_pred ccccCCCCCCcccccc-------------cCCcCCCHHHHHHHHHHHhcCCcEEEEeccCCC---CCCcc
Confidence 4689999999999998 367899999999999999999999999999999 58875
No 24
>4a37_A Metallo-carboxypeptidase; metallo-protease, hydrolase; 1.60A {Pseudomonas aeruginosa} PDB: 4a38_A 4a39_A*
Probab=99.41 E-value=9.7e-14 Score=108.06 Aligned_cols=54 Identities=28% Similarity=0.283 Sum_probs=49.3
Q ss_pred CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccCCceEEeeCCC
Q psy17408 25 VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDD 94 (96)
Q Consensus 25 ~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg~~~i~yPy~~ 94 (96)
.+|.|+.|||||||||. +.+++||||+||++++++.++++++++|++++ +||++
T Consensus 229 ~~R~n~~GvDLNRnf~~-------------~~~~s~pEt~al~~~~~~~~~~~~iDlHs~~~---~p~~~ 282 (388)
T 4a37_A 229 NLRTNAAGQDLNRAWLE-------------PSAERSPEVWFVQQEMKRHGVDLFLDIHGDEE---IPHVF 282 (388)
T ss_dssp CSSCCTTSCCGGGCSSS-------------CCTTTCHHHHHHHHHHHHHCCSEEEEEEEESS---CSSCE
T ss_pred CCcccCCCcCCCCCCCC-------------CCcccCHHHHHHHHHHHhcCCcEEEEeccCCC---CCCeE
Confidence 36899999999999984 57889999999999999999999999999999 68875
No 25
>3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A*
Probab=98.75 E-value=2.3e-09 Score=82.87 Aligned_cols=69 Identities=17% Similarity=0.125 Sum_probs=53.9
Q ss_pred CccCCCCCC-CCcCCCCCCCCCCCC----------CC--------------C-CCCCCCCCCCCcHHHHHHHHHHHhC--
Q psy17408 22 ARFVGRNNA-NGVDLNRNFPDQFDS----------SS--------------E-RREQPLNVKKLEPETLAMISFIKNN-- 73 (96)
Q Consensus 22 ~w~~~R~N~-~GVDLNRNFp~~w~~----------~~--------------~-~~~y~G~~p~SEpEt~Av~~~~~~~-- 73 (96)
+|..+|.++ .|+|||||||..... .. . ...++ .|+|++|+++++..+.+.
T Consensus 86 ~~~~~R~~~~d~~DLNR~Fpg~~~~ia~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~~~~~~~l~~l~~ 163 (368)
T 3fmc_A 86 EFTLGRFDPITGVNWNREYLDHGFNIEVWYQEHSHLDDDTLITAFRATLVEECARRLN--NPWGVTTGHRLAVTLQSMAH 163 (368)
T ss_dssp TEECCSBCTTTCCBGGGCCCCCCSCHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHT--CTTCCCHHHHHHHHHHHHHH
T ss_pred cccccccCCCCCCCCCCCCCCCccccchhhhhccCCchhhhHHHHHHHHHHHHHhhhc--cccCccHHHHHHHHHHHHhc
Confidence 477889887 999999999987541 10 0 12333 689999999999999875
Q ss_pred CceEEEEeccCCceEEeeC
Q psy17408 74 PFVLSGNLHGGAIVASYPF 92 (96)
Q Consensus 74 ~~~l~is~Hsg~~~i~yPy 92 (96)
+.+++|+||+++..+.+.|
T Consensus 164 ~aD~~iDLHs~~~~~~~~~ 182 (368)
T 3fmc_A 164 RADIVLDLHTGPKSCKHLY 182 (368)
T ss_dssp TCSEEEEEEEESEECEEEE
T ss_pred cCCEEEEeccCCccccccc
Confidence 6899999999999877665
No 26
>2qj8_A MLR6093 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.00A {Mesorhizobium loti}
Probab=98.30 E-value=8.8e-07 Score=66.88 Aligned_cols=56 Identities=20% Similarity=0.081 Sum_probs=40.4
Q ss_pred cCCCCCC-CCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC--CceEEEEeccCCc-eEEeeCC
Q psy17408 24 FVGRNNA-NGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN--PFVLSGNLHGGAI-VASYPFD 93 (96)
Q Consensus 24 ~~~R~N~-~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~--~~~l~is~Hsg~~-~i~yPy~ 93 (96)
...|.|+ .|+|||||||.. +..++|.+....+++.. +++++|+||+++. +.++||.
T Consensus 94 ~~~R~~~~~~~DLNR~f~~~--------------~~g~~e~~~a~~~~~~~~~~~d~~iDlHs~~~~~~~~p~~ 153 (332)
T 2qj8_A 94 AWTRNTPIDGKNLNRVFPGR--------------SDGSVSERIADAISRLLLPVVDTVLDLHSFGPTWDCAPSI 153 (332)
T ss_dssp HTCSSCTTTCCCTTTTTTCC--------------TTSCHHHHHHHHHHHHTGGGCSEEEEEEEEETTEEECSEE
T ss_pred hCcCCCccCCCcccccCCCC--------------CCCCHHHHHHHHHHHhhhhcCCEEEECCCCCCcCCcCcEE
Confidence 3578785 999999999852 22467877776666654 5889999999973 4555553
No 27
>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2}
Probab=98.14 E-value=2.6e-06 Score=65.01 Aligned_cols=55 Identities=18% Similarity=0.114 Sum_probs=36.0
Q ss_pred CCCCCC-CCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC--CceEEEEeccCCceEEe-eCC
Q psy17408 25 VGRNNA-NGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN--PFVLSGNLHGGAIVASY-PFD 93 (96)
Q Consensus 25 ~~R~N~-~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~--~~~l~is~Hsg~~~i~y-Py~ 93 (96)
..|.|+ .|+|||||||... ..++|.+....+++.. ++.+.|+||++++...| ||.
T Consensus 103 ~~R~~~~~~~DLNR~f~~~~--------------~g~~~~~~a~~~~~~~~~~~d~~iDlHs~~~~~~~~p~~ 161 (354)
T 3cdx_A 103 DTRLSPVDGRDINRCFPGDP--------------RGTFSQMLAHFLDSVILPMADISVDMHTAGHSYDSTPST 161 (354)
T ss_dssp TCSSCTTTCCCGGGSTTCCT--------------TSCHHHHHHHHHHHTTGGGCSEEEEECCCTTTEEECSEE
T ss_pred hCCCCCCCCccccccCCCCC--------------CCCHHHHHHHHHHHHHHhcCCEEEEcCCCCCccccCCEE
Confidence 467776 8999999998632 1244444333333332 68899999999876544 553
No 28
>3na6_A Succinylglutamate desuccinylase/aspartoacylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Ruegeria SP}
Probab=97.09 E-value=0.00084 Score=50.81 Aligned_cols=48 Identities=19% Similarity=0.314 Sum_probs=31.4
Q ss_pred cCCCCCC-CCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHH-hC--CceEEEEeccCCc
Q psy17408 24 FVGRNNA-NGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIK-NN--PFVLSGNLHGGAI 86 (96)
Q Consensus 24 ~~~R~N~-~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~-~~--~~~l~is~Hsg~~ 86 (96)
...|.|+ .|+||||+||.... .+..| .++..+. .. +..+.|.||+++.
T Consensus 98 ~~~R~~~~~~~DLNR~Fp~~~~-------------g~~~~--~~a~~~~~~~~~~~d~~iDLH~~~~ 149 (331)
T 3na6_A 98 ASARTSPIDRGNLNRAFPGRPD-------------GTVTQ--KIADYFQRTLLPMADVAVDFHSGGK 149 (331)
T ss_dssp TTSSSCTTTCCCGGGCTTCCTT-------------SCHHH--HHHHHHHHTTGGGCSEEEECCCCCT
T ss_pred hCcccCCCCCCchHhhCCCCCC-------------CCHHH--HHHHHHHHhhhhcCCEEEEcCCCCC
Confidence 4568888 99999999986321 12223 3333333 22 4789999999875
No 29
>1yw6_A Succinylglutamate desuccinylase; alpha-beta protein., structural genomics, PSI, protein structure initiative; 3.10A {Escherichia coli} SCOP: c.56.5.7
Probab=96.44 E-value=0.0043 Score=46.86 Aligned_cols=51 Identities=16% Similarity=0.150 Sum_probs=30.3
Q ss_pred cCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcH-HHHHHHHHHHh------CCceEEEEeccCC
Q psy17408 24 FVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEP-ETLAMISFIKN------NPFVLSGNLHGGA 85 (96)
Q Consensus 24 ~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEp-Et~Av~~~~~~------~~~~l~is~Hsg~ 85 (96)
...|.+ ++||||+||..+... ...+|. ++++|.+++.+ ....+.|+||++.
T Consensus 98 ~~~R~~--~~DLNR~Fpg~~~~~---------~~~~e~~rA~~l~~~~~~~~~~~~~~~d~~iDlHs~~ 155 (335)
T 1yw6_A 98 QGKRYC--HSDMNRMFGGRWQLF---------AESGETCRARELEQCLEDFYDQGKESVRWHLDLHTAI 155 (335)
T ss_dssp SCCC-----CCSTTSSSSSSCCS---------SCCHHHHHHHHHHHHHHHHHHTTCCSCEEEEEEECCS
T ss_pred hCCCCC--CCCcccccCCccccC---------CCChHHHHHHHHHHHHHHHhhcccccceEEEECCCCC
Confidence 345655 689999999654321 011232 35666665554 3578999999874
No 30
>2gu2_A ASPA protein; aspartoacylase family, aminoacylase-2, ACY-2, ACY2_RAT, STRU genomics, PSI, protein structure initiative; HET: MSE; 1.80A {Rattus norvegicus} SCOP: c.56.5.7 PDB: 2q4z_A 2i3c_A 2q51_A 2o4h_A* 2o53_A
Probab=95.16 E-value=0.0065 Score=45.51 Aligned_cols=51 Identities=22% Similarity=0.092 Sum_probs=32.1
Q ss_pred CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC-------CceEEEEeccC
Q psy17408 25 VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN-------PFVLSGNLHGG 84 (96)
Q Consensus 25 ~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~-------~~~l~is~Hsg 84 (96)
..|. .++||||.||....+. + ....+.+|.+....+++.. +..+.|+||++
T Consensus 60 ~~R~--~~~DLNR~Fpg~~~g~--~-----~~~~~~~e~r~A~~l~~~~~~~~~~~~~d~~iDLHs~ 117 (312)
T 2gu2_A 60 CTRY--IDCDLNRVFDLENLSK--E-----MSEDLPYEVRRAQEINHLFGPKNSDDAYDVVFDLHNT 117 (312)
T ss_dssp TSSC--SSSCGGGCCSHHHHTC--C-----CCTTSCHHHHHHHHHHHHHCCTTSTTSCSEEEEEEEC
T ss_pred CCCC--cCCCcccCCCCcccCC--c-----cccCCCHHHHHHHHHHHHHhhhccCcCceEEEECCCC
Confidence 3454 7999999998532111 0 0112377776665555542 67899999996
No 31
>2bco_A Succinylglutamate desuccinylase; NESG, VPR14, structural genomics, PSI, protein structure initiative; 2.33A {Vibrio parahaemolyticus} SCOP: c.56.5.7 PDB: 2g9d_A
Probab=94.84 E-value=0.03 Score=42.51 Aligned_cols=46 Identities=20% Similarity=0.099 Sum_probs=27.4
Q ss_pred CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHH------HHHHHHhC--CceEE-EEeccCC
Q psy17408 25 VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLA------MISFIKNN--PFVLS-GNLHGGA 85 (96)
Q Consensus 25 ~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~A------v~~~~~~~--~~~l~-is~Hsg~ 85 (96)
..|.+ ++||||.||..+. | +.+|++. ++..+.+. +..+. |.+|++.
T Consensus 104 ~~R~~--~~DLNR~Fpg~~~---------g----~~~~~~Ra~~l~~~a~~~~~~~~~~d~~~iDLHt~~ 158 (350)
T 2bco_A 104 HTRFL--EENLNRLFDEKEH---------E----PTKELAIADTLKLLVRDFYQDTEPKTRWHLDLHCAI 158 (350)
T ss_dssp TSSCS--SSCGGGCSSSSCC---------C----CCHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEEES
T ss_pred CCccC--CCCCCCCCCCCCC---------C----CchHHHHHHHHHHHHHHHHhccCCCcEEEEECccCC
Confidence 44555 9999999996432 1 2445553 33333332 34566 8999764
No 32
>1yw4_A Succinylglutamate desuccinylase; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.00A {Chromobacterium violaceum} SCOP: c.56.5.7
Probab=94.32 E-value=0.027 Score=42.62 Aligned_cols=49 Identities=20% Similarity=0.180 Sum_probs=31.4
Q ss_pred CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHH---HHHHHHHHHh-----CCceEEEEeccCCc
Q psy17408 25 VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPE---TLAMISFIKN-----NPFVLSGNLHGGAI 86 (96)
Q Consensus 25 ~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpE---t~Av~~~~~~-----~~~~l~is~Hsg~~ 86 (96)
..|. .++||||.||...... .+.+| .+++...+.+ .+..+.|.||++..
T Consensus 97 ~~R~--~~~DlNR~Fpg~~~g~-----------~~~~e~~rA~~l~~~~~~~~~~~~~~d~~iDLH~~~~ 153 (341)
T 1yw4_A 97 GVRY--GNYDMNRLFNGAHARH-----------PELPESVRAAELETLAAEFFAGARARKLHYDLHTAIR 153 (341)
T ss_dssp TSSC--SSSCGGGSTTTGGGGC-----------TTCHHHHHHHHHHHHHHHHHHTCSSCEEEEEEEEESS
T ss_pred cCCC--CcCCcCcCCCcccccC-----------CCCHHHHHHHHHHHHHHHhcccCCCCcEEEECCCCCc
Confidence 3455 6899999999643221 11445 5556665553 26788999998753
No 33
>3nh4_A Aspartoacylase-2; mercapturates, hydrolase; 2.00A {Mus musculus} SCOP: c.56.5.0 PDB: 3nh5_A 3nfz_A 3nh8_A*
Probab=89.96 E-value=0.2 Score=38.07 Aligned_cols=50 Identities=22% Similarity=0.113 Sum_probs=28.8
Q ss_pred CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCC-CCcHHHHHHHHHHHhC-------CceEEEEeccC
Q psy17408 25 VGRNNANGVDLNRNFPDQFDSSSERREQPLNVK-KLEPETLAMISFIKNN-------PFVLSGNLHGG 84 (96)
Q Consensus 25 ~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p-~SEpEt~Av~~~~~~~-------~~~l~is~Hsg 84 (96)
..|.. ..||||.||-..... +.+ ....|.+.-..+.+.. ...+.|.||++
T Consensus 70 ~~R~~--~~DLNR~Fpg~~~~~--------~~~~~~s~e~r~A~~l~~~l~p~~~~~~~d~~iDLHs~ 127 (327)
T 3nh4_A 70 CCRYL--DRDLNRSCTLTFLGS--------TATPDDPYEVKRARELNQLLGPKGTGQAFDFTLDLHNT 127 (327)
T ss_dssp TSSCS--SSCGGGCCSHHHHTS--------CCCTTSCHHHHHHHHHHHHHCCTTSTTSCSEEEEEEEC
T ss_pred cCCCC--CCCcccCCCCccccc--------cCcCCCCHHHHHHHHHHHHhhhccCCcCCcEEEECcCC
Confidence 44554 589999998643221 011 1235654433333332 47899999999
No 34
>1fex_A TRF2-interacting telomeric RAP1 protein; helix turn helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Synthetic} SCOP: a.4.1.3
Probab=37.34 E-value=28 Score=19.60 Aligned_cols=20 Identities=15% Similarity=0.448 Sum_probs=17.5
Q ss_pred CCCCCCcHHHHHHHHHHHhC
Q psy17408 54 LNVKKLEPETLAMISFIKNN 73 (96)
Q Consensus 54 G~~p~SEpEt~Av~~~~~~~ 73 (96)
|-.+|++.|=++|++|+.++
T Consensus 1 gR~~FT~edD~~L~~~v~~~ 20 (59)
T 1fex_A 1 GRIAFTDADDVAILTYVKEN 20 (59)
T ss_dssp CCCCCCHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHh
Confidence 34689999999999999887
No 35
>1ews_A RK-1 defensin, alpha-defisin; alpha defensin, triple-stranded beta-sheet, antimicrobial protein; NMR {Oryctolagus cuniculus} SCOP: g.9.1.1
Probab=34.03 E-value=14 Score=18.57 Aligned_cols=15 Identities=53% Similarity=1.205 Sum_probs=11.0
Q ss_pred cccCCCCceeeecCCccC
Q psy17408 3 KYCDCKSNWLPYEGSCNS 20 (96)
Q Consensus 3 ~~~~~~~~~~a~~~~~~~ 20 (96)
||||+ |-...|+|..
T Consensus 7 kycdp---wevidgscgl 21 (32)
T 1ews_A 7 KYCDP---WEVIDGSCGL 21 (32)
T ss_dssp SSCCT---TEEEEECCSS
T ss_pred cccCh---hheecccccc
Confidence 78987 6667787764
No 36
>1ayg_A Cytochrome C-552; electron transport, porphyrin, ferrous iron; HET: HEC; NMR {Hydrogenobacter thermophilus} SCOP: a.3.1.1 PDB: 1ynr_A* 2ai5_A*
Probab=32.44 E-value=32 Score=19.17 Aligned_cols=17 Identities=12% Similarity=0.169 Sum_probs=15.2
Q ss_pred CCCcHHHHHHHHHHHhC
Q psy17408 57 KKLEPETLAMISFIKNN 73 (96)
Q Consensus 57 p~SEpEt~Av~~~~~~~ 73 (96)
..|+.|.++|+.||.+.
T Consensus 63 ~Lsd~ei~~l~~yl~~l 79 (80)
T 1ayg_A 63 NVTDAEAKQLAQWILSI 79 (80)
T ss_dssp CCCHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHhc
Confidence 68999999999999875
No 37
>2d0s_A Cytochrome C, cytochrome C552; heme protein, electron transport; HET: HEC; 2.20A {Hydrogenophilus thermoluteolus}
Probab=31.31 E-value=38 Score=18.73 Aligned_cols=18 Identities=6% Similarity=0.134 Sum_probs=15.4
Q ss_pred CCCCcHHHHHHHHHHHhC
Q psy17408 56 VKKLEPETLAMISFIKNN 73 (96)
Q Consensus 56 ~p~SEpEt~Av~~~~~~~ 73 (96)
...|+.|.++|+.||.+.
T Consensus 61 ~~Ls~~ei~~l~~yl~~l 78 (79)
T 2d0s_A 61 PQVAEADIEKIVRWVLTL 78 (79)
T ss_dssp TTSCHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHhC
Confidence 367999999999999864
No 38
>1a56_A C-551, ferricytochrome C-552; hemoprotein, prokaryotic electron transport; HET: HEC; NMR {Nitrosomonas europaea} SCOP: a.3.1.1 PDB: 1a8c_A*
Probab=30.88 E-value=31 Score=19.25 Aligned_cols=18 Identities=17% Similarity=0.233 Sum_probs=15.3
Q ss_pred CCCCcHHHHHHHHHHHhC
Q psy17408 56 VKKLEPETLAMISFIKNN 73 (96)
Q Consensus 56 ~p~SEpEt~Av~~~~~~~ 73 (96)
...|+.|.++|+.||.+.
T Consensus 63 ~~Ls~~ei~~l~~yl~~l 80 (81)
T 1a56_A 63 VNVSDADAKALADWILTL 80 (81)
T ss_dssp CSSSSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhC
Confidence 367999999999999763
No 39
>1c75_A Cytochrome C-553; heme, bacillus pasteurii, AB initio, ATOM resolution, electron transport; HET: HEM; 0.97A {Sporosarcina pasteurii} SCOP: a.3.1.1 PDB: 1b7v_A* 1k3g_A* 1k3h_A* 1n9c_A*
Probab=30.58 E-value=43 Score=18.18 Aligned_cols=21 Identities=14% Similarity=0.116 Sum_probs=17.0
Q ss_pred CCCCCCCCcHHHHHHHHHHHhC
Q psy17408 52 QPLNVKKLEPETLAMISFIKNN 73 (96)
Q Consensus 52 y~G~~p~SEpEt~Av~~~~~~~ 73 (96)
.+. ...++.|..+|+.||.+.
T Consensus 50 Mp~-~~ls~~ei~~l~~yl~~~ 70 (71)
T 1c75_A 50 MPG-GIAKGAEAEAVAAWLAEK 70 (71)
T ss_dssp BCS-CSSCHHHHHHHHHHHHTC
T ss_pred CCC-CCCCHHHHHHHHHHHHhc
Confidence 444 568999999999999874
No 40
>2odf_A AGR_C_3887P, hypothetical protein ATU2144; structural genomics, unknown FUNC PSI-2, MCSG, protein structure initiative; 1.90A {Agrobacterium tumefaciens str} SCOP: c.56.5.9
Probab=30.26 E-value=58 Score=23.36 Aligned_cols=55 Identities=22% Similarity=0.088 Sum_probs=29.7
Q ss_pred CcCCCCCCCCC--CCCCCCCCCCCCCCCCCcHHH------------HHHHHHHHh----CCceEEEEeccCCc
Q psy17408 32 GVDLNRNFPDQ--FDSSSERREQPLNVKKLEPET------------LAMISFIKN----NPFVLSGNLHGGAI 86 (96)
Q Consensus 32 GVDLNRNFp~~--w~~~~~~~~y~G~~p~SEpEt------------~Av~~~~~~----~~~~l~is~Hsg~~ 86 (96)
=|||||.=... ......-...++..+.++.|. ++|...+.+ ++..+.+++||+-.
T Consensus 86 viDlNR~p~~~~l~~~~~~g~~ip~n~~l~~~e~~~Ri~~~~~PYH~al~~~l~~~~a~~g~~vlid~HS~~p 158 (257)
T 2odf_A 86 VYDCNRPPESPSAMPVKSEIYDIPGNFDLDEAERFARTSALYVPFHDRVSEIIAERQAAGRKVVVVTIHSFTP 158 (257)
T ss_dssp TCCTTSCTTSTTSSCSEETTEECGGGTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEECS
T ss_pred EEECCCCCCchhccccccCCeEecCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEecCCCc
Confidence 58999986441 111000011222245566665 334444444 47889999999754
No 41
>3arc_L Photosystem II reaction center protein L; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_L* 3a0b_L* 3a0h_L* 2axt_L* 3bz1_L* 3bz2_L* 3kzi_L* 3prq_L* 3prr_L*
Probab=29.05 E-value=16 Score=19.32 Aligned_cols=10 Identities=50% Similarity=0.667 Sum_probs=7.6
Q ss_pred CCCCCcCCCC
Q psy17408 28 NNANGVDLNR 37 (96)
Q Consensus 28 ~N~~GVDLNR 37 (96)
-|...|+|||
T Consensus 5 pn~q~VELNR 14 (37)
T 3arc_L 5 PNRQPVELNR 14 (37)
T ss_dssp TTCCCBCCCH
T ss_pred CCCCcceech
Confidence 3566899998
No 42
>2exv_A Cytochrome C-551; alpha helix, heme C, electron transport; HET: HEC; 1.86A {Pseudomonas aeruginosa} PDB: 2pac_A* 351c_A* 451c_A* 1dvv_A*
Probab=28.99 E-value=39 Score=18.65 Aligned_cols=17 Identities=6% Similarity=0.184 Sum_probs=15.1
Q ss_pred CCCcHHHHHHHHHHHhC
Q psy17408 57 KKLEPETLAMISFIKNN 73 (96)
Q Consensus 57 p~SEpEt~Av~~~~~~~ 73 (96)
..|+.|..+|+.||.+.
T Consensus 65 ~ls~~ei~~l~~yl~~l 81 (82)
T 2exv_A 65 AVSDDEAQTLAKWVLSQ 81 (82)
T ss_dssp CCCHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHhC
Confidence 68999999999999874
No 43
>1cch_A Cytochrome C551; electron transport; HET: HEM; NMR {Pseudomonas stutzeri} SCOP: a.3.1.1 PDB: 1fi3_A* 2i8f_A* 1cor_A*
Probab=27.92 E-value=42 Score=18.48 Aligned_cols=17 Identities=12% Similarity=0.110 Sum_probs=15.2
Q ss_pred CCCcHHHHHHHHHHHhC
Q psy17408 57 KKLEPETLAMISFIKNN 73 (96)
Q Consensus 57 p~SEpEt~Av~~~~~~~ 73 (96)
..++.|..+|+.||.+.
T Consensus 65 ~ls~~ei~~l~~yl~~l 81 (82)
T 1cch_A 65 PVTEEEAKILAEWVLSL 81 (82)
T ss_dssp SCCHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHhc
Confidence 68999999999999875
No 44
>2zxy_A Cytochrome C552, cytochrome C555; heme protein, oxygen binding, transport protein; HET: HEC; 1.15A {Aquifex aeolicus}
Probab=27.68 E-value=36 Score=18.79 Aligned_cols=17 Identities=24% Similarity=0.272 Sum_probs=14.8
Q ss_pred CCCcHHHHHHHHHHHhC
Q psy17408 57 KKLEPETLAMISFIKNN 73 (96)
Q Consensus 57 p~SEpEt~Av~~~~~~~ 73 (96)
..|+.|..+|+.||.+.
T Consensus 70 ~ls~~ei~~l~~yl~sl 86 (87)
T 2zxy_A 70 GLSDAELKALADFILSH 86 (87)
T ss_dssp GCCHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHhc
Confidence 57899999999999864
No 45
>1kx2_A Mono-heme C-type cytochrome SCYA; HAEM protein, ferrocytochrome, electron transport, GRAM negative, bacteria; HET: HEC; NMR {Shewanella putrefaciens} SCOP: a.3.1.1 PDB: 1kx7_A*
Probab=25.49 E-value=40 Score=18.98 Aligned_cols=17 Identities=18% Similarity=0.263 Sum_probs=15.0
Q ss_pred CCCcHHHHHHHHHHHhC
Q psy17408 57 KKLEPETLAMISFIKNN 73 (96)
Q Consensus 57 p~SEpEt~Av~~~~~~~ 73 (96)
..|+.|..+|+.||.+.
T Consensus 64 ~Lsd~ei~~l~~Yi~~~ 80 (81)
T 1kx2_A 64 DCTDEDYKAAIEFMSKA 80 (81)
T ss_dssp SCCHHHHHHHHHHHTSC
T ss_pred CCCHHHHHHHHHHHHHc
Confidence 57999999999999764
No 46
>1w66_A Lipoyltransferase; lipoate-protein ligase B, lipoic acid, acyltransferase, mycobacterium tuberculosis structural proteomics project; HET: DKA; 1.08A {Mycobacterium tuberculosis} SCOP: d.104.1.3
Probab=23.71 E-value=37 Score=24.08 Aligned_cols=15 Identities=27% Similarity=0.527 Sum_probs=13.0
Q ss_pred EEEeccCCceEEeeC
Q psy17408 78 SGNLHGGAIVASYPF 92 (96)
Q Consensus 78 ~is~Hsg~~~i~yPy 92 (96)
-+.+|+-||++.||-
T Consensus 81 ~~tYHgPGQlv~Y~I 95 (232)
T 1w66_A 81 KITWHGPGQLVGYPI 95 (232)
T ss_dssp SEEEECTTEEEEEEE
T ss_pred ceEEECCCCeEEEEE
Confidence 378999999999984
No 47
>1wve_C 4-cresol dehydrogenase [hydroxylating] cytochrome C subunit; flavocytochrome, electron-transfer, FAD, heme, oxidoreductase; HET: FAD HEM; 1.85A {Pseudomonas putida} SCOP: a.3.1.1 PDB: 1diq_C* 1dii_C*
Probab=22.20 E-value=63 Score=18.06 Aligned_cols=18 Identities=6% Similarity=0.119 Sum_probs=15.8
Q ss_pred CCCcHHHHHHHHHHHhCC
Q psy17408 57 KKLEPETLAMISFIKNNP 74 (96)
Q Consensus 57 p~SEpEt~Av~~~~~~~~ 74 (96)
..|+.|.++|+.||.+.+
T Consensus 57 ~ls~~ei~~l~~yl~~~~ 74 (80)
T 1wve_C 57 YVDDESLTQVAEYLSSLP 74 (80)
T ss_dssp TSCHHHHHHHHHHHHHSC
T ss_pred CCCHHHHHHHHHHHHHCc
Confidence 579999999999999864
No 48
>1gdv_A Cytochrome C6; RED ALGA, electron transport; HET: HEM; 1.57A {Porphyra yezoensis} SCOP: a.3.1.1 PDB: 2zbo_A*
Probab=21.40 E-value=55 Score=17.94 Aligned_cols=17 Identities=0% Similarity=0.212 Sum_probs=15.0
Q ss_pred CCCcHHHHHHHHHHHhC
Q psy17408 57 KKLEPETLAMISFIKNN 73 (96)
Q Consensus 57 p~SEpEt~Av~~~~~~~ 73 (96)
..|+.|..+|+.||.+.
T Consensus 64 ~ls~~ei~~l~~yl~~~ 80 (85)
T 1gdv_A 64 RLVDEDIEDAANYVLSQ 80 (85)
T ss_dssp TSCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 68999999999999863
No 49
>1cno_A Cytochrome C552; electron transport, pseudomonas nautica, X RAY structure, multiwavelength anomalous dispersion, heme; HET: HEC; 2.20A {Marinobacter hydrocarbonoclasticus} SCOP: a.3.1.1
Probab=21.32 E-value=68 Score=18.01 Aligned_cols=18 Identities=11% Similarity=0.342 Sum_probs=15.7
Q ss_pred CCCcHHHHHHHHHHHhCC
Q psy17408 57 KKLEPETLAMISFIKNNP 74 (96)
Q Consensus 57 p~SEpEt~Av~~~~~~~~ 74 (96)
..|+.|..+|+.||.+.+
T Consensus 66 ~ls~~ei~~l~~yl~~l~ 83 (87)
T 1cno_A 66 ALSDADIANLAAYYASNP 83 (87)
T ss_dssp TCCHHHHHHHHHHHHHSC
T ss_pred hCCHHHHHHHHHHHHhCC
Confidence 579999999999998864
No 50
>1c53_A Cytochrome C553; electron transport; HET: HEM; 1.80A {Desulfovibrio vulgaris str} SCOP: a.3.1.1 PDB: 1dvh_A* 1dwl_B* 1e08_E* 2dvh_A*
Probab=21.28 E-value=55 Score=18.11 Aligned_cols=16 Identities=19% Similarity=0.345 Sum_probs=14.0
Q ss_pred CCCcHHHHHHHHHHHh
Q psy17408 57 KKLEPETLAMISFIKN 72 (96)
Q Consensus 57 p~SEpEt~Av~~~~~~ 72 (96)
..|+.|..+|+.|+.+
T Consensus 63 ~Ls~~ei~~l~~Yl~s 78 (79)
T 1c53_A 63 RYSDEEMKAMADYMSK 78 (79)
T ss_pred hCCHHHHHHHHHHHHh
Confidence 4799999999999975
No 51
>1gks_A Cytochrome C551; halophilic purple phototrophic bacterium, electron transport; HET: HEM; NMR {Halorhodospira halophila} SCOP: a.3.1.1
Probab=21.24 E-value=56 Score=18.17 Aligned_cols=16 Identities=6% Similarity=0.229 Sum_probs=14.3
Q ss_pred CCCcHHHHHHHHHHHh
Q psy17408 57 KKLEPETLAMISFIKN 72 (96)
Q Consensus 57 p~SEpEt~Av~~~~~~ 72 (96)
..|+.|..+|+.|+.+
T Consensus 61 ~Lsd~ei~~l~~yi~~ 76 (78)
T 1gks_A 61 RADREDLVKAIEYMLS 76 (78)
T ss_dssp TBCHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHh
Confidence 5799999999999976
No 52
>1cc5_A Cytochrome C5; electron transport (heme protein); HET: HEM; 2.50A {Azotobacter vinelandii} SCOP: a.3.1.1
Probab=21.11 E-value=53 Score=18.77 Aligned_cols=16 Identities=19% Similarity=0.077 Sum_probs=14.3
Q ss_pred CCCcHHHHHHHHHHHh
Q psy17408 57 KKLEPETLAMISFIKN 72 (96)
Q Consensus 57 p~SEpEt~Av~~~~~~ 72 (96)
..|+.|..+|+.||.+
T Consensus 67 ~Lsd~ei~~v~~yi~~ 82 (83)
T 1cc5_A 67 DCSDDELKAAIGKMSG 82 (83)
T ss_dssp SCCHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHh
Confidence 4899999999999975
No 53
>2wsc_J PSAJ, PSI-J, photosystem I reaction center subunit IX; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Spinacia oleracea} PDB: 2wse_J* 2wsf_J* 2o01_J* 3lw5_J*
Probab=20.41 E-value=39 Score=18.44 Aligned_cols=10 Identities=50% Similarity=1.102 Sum_probs=8.7
Q ss_pred cCCCCCCCCC
Q psy17408 33 VDLNRNFPDQ 42 (96)
Q Consensus 33 VDLNRNFp~~ 42 (96)
+.+||=||+.
T Consensus 27 IEiNRfFPD~ 36 (44)
T 2wsc_J 27 IEINRFFPDA 36 (44)
T ss_dssp TSSTTTSCCC
T ss_pred HHHHHhCchH
Confidence 7899999985
Done!