BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1741
(333 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O14681|EI24_HUMAN Etoposide-induced protein 2.4 homolog OS=Homo sapiens GN=EI24 PE=1
SV=4
Length = 340
Score = 235 bits (600), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 132/327 (40%), Positives = 205/327 (62%), Gaps = 38/327 (11%)
Query: 5 LLKGILDSLKGIIIIFRLDNKLKERSELKRKKKEFESPSHQKTQSSSVPEELKRKKKEFE 64
L +GI DS+ GI I +LD +++++ E +R+++ + ++ QS ++RK++
Sbjct: 12 LARGIKDSIWGICTISKLDARIQQKREEQRRRRASSVLAQRRAQS------IERKQES-- 63
Query: 65 SPSHQKTQSSSVPEENKVWKRTVQCCLLNGGVFCGSILLFDHILLPFLLMILRLILGSSS 124
E ++ R QCC NGGVF S+LLF + +P L + I+G S
Sbjct: 64 --------------EPRIVSRIFQCCAWNGGVFWFSLLLFYRVFIPVLQSVTARIIGDPS 109
Query: 125 TYTQFYWTWINLVLSWTFNALWVLPLFTLSKVINSLWFQDIADSAYRYTQGRPHHFTSLS 184
+ W+W+ L+ F+ALWVLPLF LSKV+N++WFQDIAD A+ + +PH F S+S
Sbjct: 110 LHGD-VWSWLEFFLTSIFSALWVLPLFVLSKVVNAIWFQDIADLAFEVSGRKPHPFPSVS 168
Query: 185 KLLADTLFSLLIQSLFLVQTMLVSKLPLYLLSDSIGLIHMCLLYSLYAYEYKWYNQGWEL 244
K++AD LF+LL+Q+LFL+Q M VS P++L+ + L+HM LLYSLY +EY+W+N+G E+
Sbjct: 169 KIIADMLFNLLLQALFLIQGMFVSLFPIHLVGQLVSLLHMSLLYSLYCFEYRWFNKGIEM 228
Query: 245 HRRLTFIEHNFPYFLGFGLTLAVLTHVCSSYVIRQDILKTSSLFHLLFIILLLCCSE--- 301
H+RL+ IE N+PY+ GFGL LA LT + SSY+I + LF +LF + ++ +E
Sbjct: 229 HQRLSNIERNWPYYFGFGLPLAFLTAMQSSYII------SGCLFSILFPLFIISANEAKT 282
Query: 302 ------YQLKLFSPVIAISNAVFNHTI 322
+QL+LFS V+ +SN +F+ T+
Sbjct: 283 PGKAYLFQLRLFSLVVFLSNRLFHKTV 309
>sp|Q61070|EI24_MOUSE Etoposide-induced protein 2.4 OS=Mus musculus GN=Ei24 PE=1 SV=3
Length = 340
Score = 233 bits (594), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 205/327 (62%), Gaps = 38/327 (11%)
Query: 5 LLKGILDSLKGIIIIFRLDNKLKERSELKRKKKEFESPSHQKTQSSSVPEELKRKKKEFE 64
L +GI DS+ GI I +LD +++++ E +R+++ + ++ P+ ++RK++
Sbjct: 12 LGRGIKDSIWGICTISKLDARIQQKREEQRRRRASSLLAQRR------PQSVERKQES-- 63
Query: 65 SPSHQKTQSSSVPEENKVWKRTVQCCLLNGGVFCGSILLFDHILLPFLLMILRLILGSSS 124
E ++ R QCC NGGVF S+LLF + +P L + I+G S
Sbjct: 64 --------------EPRIVSRIFQCCAWNGGVFWFSLLLFYRVFIPVLQSVTARIIGDPS 109
Query: 125 TYTQFYWTWINLVLSWTFNALWVLPLFTLSKVINSLWFQDIADSAYRYTQGRPHHFTSLS 184
+ W+W+ L+ F+ALWVLPLF LSKV+N++WFQDIAD A+ + +PH F S+S
Sbjct: 110 LHGD-VWSWLEFFLTSIFSALWVLPLFVLSKVVNAIWFQDIADLAFEVSGRKPHPFPSVS 168
Query: 185 KLLADTLFSLLIQSLFLVQTMLVSKLPLYLLSDSIGLIHMCLLYSLYAYEYKWYNQGWEL 244
K++AD LF+LL+Q+LFL+Q M VS P++L+ + L+HM LLYSLY +EY+W+N+G E+
Sbjct: 169 KIIADMLFNLLLQALFLIQGMFVSLFPIHLVGQLVSLLHMSLLYSLYCFEYRWFNKGIEM 228
Query: 245 HRRLTFIEHNFPYFLGFGLTLAVLTHVCSSYVIRQDILKTSSLFHLLFIILLLCCSE--- 301
H+RL+ IE N+PY+ GFGL LA LT + SSY+I + LF +LF + ++ +E
Sbjct: 229 HQRLSNIERNWPYYFGFGLPLAFLTAMQSSYII------SGCLFSILFPLFIISANEAKT 282
Query: 302 ------YQLKLFSPVIAISNAVFNHTI 322
+QL+LFS V+ +SN +F+ T+
Sbjct: 283 PGKAYLFQLRLFSLVVFLSNRLFHKTV 309
>sp|Q4KM77|EI24_RAT Etoposide-induced protein 2.4 homolog OS=Rattus norvegicus GN=Ei24
PE=2 SV=1
Length = 340
Score = 233 bits (593), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 205/327 (62%), Gaps = 38/327 (11%)
Query: 5 LLKGILDSLKGIIIIFRLDNKLKERSELKRKKKEFESPSHQKTQSSSVPEELKRKKKEFE 64
L +GI DS+ GI I +LD +++++ E +R+++ + ++ QS ++RK++
Sbjct: 12 LGRGIKDSIWGICTISKLDARIQQKREEQRRRRASSLLAQRRAQS------VERKQES-- 63
Query: 65 SPSHQKTQSSSVPEENKVWKRTVQCCLLNGGVFCGSILLFDHILLPFLLMILRLILGSSS 124
E ++ R QCC NGGVF S+LLF + +P L + ++G S
Sbjct: 64 --------------EPRIVSRIFQCCAWNGGVFWFSLLLFYRVFIPVLQSVTARVIGDPS 109
Query: 125 TYTQFYWTWINLVLSWTFNALWVLPLFTLSKVINSLWFQDIADSAYRYTQGRPHHFTSLS 184
+ W+W+ L+ F+ALWVLPLF LSKV+N++WFQDIAD A+ + +PH F S+S
Sbjct: 110 LHGD-VWSWLEFFLTSIFSALWVLPLFVLSKVVNAIWFQDIADLAFEVSGRKPHPFPSVS 168
Query: 185 KLLADTLFSLLIQSLFLVQTMLVSKLPLYLLSDSIGLIHMCLLYSLYAYEYKWYNQGWEL 244
K++AD LF+LL+Q+LFL+Q M VS P++L+ + L+HM LLYSLY +EY+W+N+G E+
Sbjct: 169 KIIADMLFNLLLQALFLIQGMFVSLFPIHLVGQLVSLLHMSLLYSLYCFEYRWFNKGIEM 228
Query: 245 HRRLTFIEHNFPYFLGFGLTLAVLTHVCSSYVIRQDILKTSSLFHLLFIILLLCCSE--- 301
H+RL+ IE N+PY+ GFGL LA LT + SSY+I + LF +LF + ++ +E
Sbjct: 229 HQRLSNIERNWPYYFGFGLPLAFLTAMQSSYII------SGCLFSILFPLFIISANEAKT 282
Query: 302 ------YQLKLFSPVIAISNAVFNHTI 322
+QL+LFS V+ +SN +F+ T+
Sbjct: 283 PGKAYLFQLRLFSLVVFLSNRLFHKTV 309
>sp|Q08DE5|EI24_BOVIN Etoposide-induced protein 2.4 homolog OS=Bos taurus GN=EI24 PE=2
SV=1
Length = 340
Score = 212 bits (540), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 205/327 (62%), Gaps = 38/327 (11%)
Query: 5 LLKGILDSLKGIIIIFRLDNKLKERSELKRKKKEFESPSHQKTQSSSVPEELKRKKKEFE 64
L +GI DS+ GI I +LD +++++ E +R+++ + ++ QS ++RK++
Sbjct: 12 LARGIKDSIWGICTISKLDARIQQKREEQRRRRASSILAQRRAQS------IERKQES-- 63
Query: 65 SPSHQKTQSSSVPEENKVWKRTVQCCLLNGGVFCGSILLFDHILLPFLLMILRLILGSSS 124
E ++ R QCC NGGVF S+LLF + +P L + I+G S
Sbjct: 64 --------------EPRIVSRIFQCCAWNGGVFWFSLLLFYRVFIPVLQSVTAQIIGDPS 109
Query: 125 TYTQFYWTWINLVLSWTFNALWVLPLFTLSKVINSLWFQDIADSAYRYTQGRPHHFTSLS 184
+ W+W+ L+ F+ALWVLPLF LSKV+N++WFQDIAD A+ + +PH F S+S
Sbjct: 110 LHGD-VWSWLEFFLTSIFSALWVLPLFVLSKVVNAIWFQDIADLAFEVSGRKPHPFPSVS 168
Query: 185 KLLADTLFSLLIQSLFLVQTMLVSKLPLYLLSDSIGLIHMCLLYSLYAYEYKWYNQGWEL 244
K++AD LF+LL+Q+LFL+Q M VS P++L+ + L+HM LLYSLY +EY+W+N+G E+
Sbjct: 169 KIIADMLFNLLLQALFLLQGMFVSLFPIHLVGQLVSLLHMSLLYSLYCFEYRWFNKGIEM 228
Query: 245 HRRLTFIEHNFPYFLGFGLTLAVLTHVCSSYVIRQDILKTSSLFHLLFIILLLCCSE--- 301
H+RL+ IE N+PY+ GFGL LA LT + SSY++ + LF +LF + ++ +E
Sbjct: 229 HQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIV------SGCLFSILFPLFIISANEAKT 282
Query: 302 ------YQLKLFSPVIAISNAVFNHTI 322
+QL+LFS V+ +SN +F+ T+
Sbjct: 283 PGKAYLFQLRLFSLVVFLSNRLFHKTV 309
>sp|Q20123|EI24_CAEEL Ectopic P granules protein 4 OS=Caenorhabditis elegans GN=epg-4
PE=2 SV=1
Length = 315
Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
Query: 147 VLPLFTLSKVINSLWFQDIADSAYRYTQGRPHHFTSLSKLLADTLFSLLIQSLFLVQTML 206
++P+F S++I +LWF DI+ + R + P S +LA TL S L Q FL+Q ML
Sbjct: 118 IIPIFFASRIIQALWFSDISGACMRALKLPPPPVVPFSSMLAGTLISALHQIFFLIQGML 177
Query: 207 VSKLPLYLLSDSIGLIHMCLLYSLYAYEYKWYNQGWELHRRLTFIEHNFPYFLGFGLTLA 266
LP+ L++ I +HM LL S+Y ++Y + RR E ++PYFLGFG LA
Sbjct: 178 SQYLPIPLITPVIVYLHMALLNSMYCFDYFFDGYNLSFLRRKDIFESHWPYFLGFGTPLA 237
Query: 267 VLTHVCSSYVIRQDILKTSSLFHLLF 292
+ CS I ++ S +F LLF
Sbjct: 238 L---ACS---ISSNMFVNSVIFALLF 257
>sp|Q54PW9|EI24_DICDI Protein EI24 homolog OS=Dictyostelium discoideum GN=DDB_G0284253
PE=3 SV=1
Length = 307
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 24/216 (11%)
Query: 84 KRTVQCCLLNGGVFCGSILLFDHILLPFLLMILRLILGSSSTYTQFYWTWINLVLSWTFN 143
K + C LNG +F G+ L++ + + P L +L S+ +T Y+
Sbjct: 51 KNFIHCIFLNGIIFLGTYLIYLYWVSPMLNYLLNHFPTLSNMFTIIYF------------ 98
Query: 144 ALWVLPLFTLSKVINSLWFQDIADSAYRYTQGRPHHFTSLSKLLA---DTLFSLLIQSLF 200
+LWV P++ S + NS W+ +IA ++ GR S + +L+ D ++ L+ +
Sbjct: 99 SLWVYPVYIFSIIANSKWYTEIAKESFV-ISGRTTFANSTNGILSSFVDEIYRNLLFGVI 157
Query: 201 LVQTMLVSKLPLYLLSDSIGLIHMCLLYSLYAYEYKWYNQG-WELHRRLTFIEHNFPYFL 259
LV + +++ +P ++ I + + LYS + ++YKW +G W L +R+ + E ++ Y
Sbjct: 158 LVMSAIIAFIP---YTNFINFVIITWLYSFWCFDYKWILRGKWNLLQRIQYFETHWAYMF 214
Query: 260 GFGLTLAVLTHVCSSYVIRQDILKTSSLFHLLFIIL 295
G+GL CS + S+ + LFIIL
Sbjct: 215 GYGLIFT----TCSFFFPMLIGNAIFSILYPLFIIL 246
>sp|Q5UQ30|YL211_MIMIV Uncharacterized protein L211 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L211 PE=4 SV=1
Length = 262
Score = 34.7 bits (78), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 75/144 (52%), Gaps = 19/144 (13%)
Query: 142 FNALWVLPLFT--LSKVINSLWFQDIADSAYRYTQ--GRPHHFTSLSKL--LADTLFSLL 195
F+ + ++ LF +S + + L+F D+ D YT+ RP +SKL + + S +
Sbjct: 69 FSIINIVYLFVNVISGLFHLLYFIDLIDIVCVYTKKLNRP-----ISKLDSIGLAIVSFV 123
Query: 196 IQ-SLF----LVQTMLVSKLPLYLLSDSIGLIHMCLLYSLYAYEYKWYNQGWELHRRLTF 250
Q S++ L+ ML KL + +S I I + L +S + W+ + ++H R++
Sbjct: 124 YQLSMYIIMELIDMMLYKKLDV--VSYLIKFIILTLYHSFCCFNNLWHYKNIDIHHRISL 181
Query: 251 IEHNFPYFLGFGLTLAVLTHVCSS 274
E + Y+LG+G T+A L ++ S+
Sbjct: 182 HEKLWAYYLGYG-TIASLMYIYSN 204
>sp|Q6J6I9|BRCA1_MACMU Breast cancer type 1 susceptibility protein homolog OS=Macaca
mulatta GN=BRCA1 PE=3 SV=1
Length = 1863
Score = 34.7 bits (78), Expect = 1.0, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 9 ILDSLKGIIIIFRLDNKLKERSELKRKKKEFESPSHQKTQSSSVPEELKRKK------KE 62
+++ L II F+LD L+ + KKE SP H K + S + R + E
Sbjct: 82 LVEELLKIIHAFQLDTGLQFANSYNFAKKENHSPEHLKDEVSIIQSMGYRNRAKRLLQSE 141
Query: 63 FESPSHQKTQSSSVPEENKVWKRTVQ 88
E+PS Q+T S SVP N RT++
Sbjct: 142 PENPSLQET-SLSVPLSNLGIVRTLR 166
>sp|Q9SSG5|BOR5_ARATH Putative boron transporter 5 OS=Arabidopsis thaliana GN=BOR5 PE=3
SV=1
Length = 683
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 73/184 (39%), Gaps = 44/184 (23%)
Query: 64 ESPSHQKTQSSSVPEENKVWKRTVQCCLLNGGVFCGSILLFDHILLPFLLM---ILRLIL 120
E SH +S S E T C +++ + G LL + P +LM +
Sbjct: 61 EQLSHDTERSLSTVE---TLASTALCGVIHS-LLGGQPLLILGVAEPTVLMYKYLYDFAK 116
Query: 121 GSSSTYTQFYWTWINLVLSWTFNALWVLPLFTLSKVINSLWFQDIADSAYRYTQGRPHHF 180
G Q Y W+ V WT L+++ +F ++ +IN R+T+
Sbjct: 117 GRPELGKQLYLAWVAWVCVWTALLLFLMAIFNMAYIIN------------RFTR------ 158
Query: 181 TSLSKLLADTLFSLLIQSLFLVQTM--LVSKLPLYLLSDSIGLIHMCLLYSLYAYEYKW- 237
+A LF +LI LFL QT+ +VS+ + DS L Y+++W
Sbjct: 159 ------IAGELFGMLIAVLFLQQTIKGMVSEFRIPKGEDS----------KLEKYQFEWL 202
Query: 238 YNQG 241
Y G
Sbjct: 203 YTNG 206
>sp|Q75CK5|NST1_ASHGO Stress response protein NST1 OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NST1 PE=3
SV=2
Length = 1207
Score = 33.5 bits (75), Expect = 2.1, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 23 DNKLKERSELKRKKKEFESPSHQKTQSSSVPEELKRKKKEFESPSHQKTQSSSVPEEN 80
D + K+R E +RK+K+ +K QS E+K+K++E + P+ + +Q ++ +EN
Sbjct: 687 DQERKQREEEQRKRKQ--EKELKKLQSL----EVKKKREEDDKPTEESSQEDNLHKEN 738
>sp|Q6J6J0|BRCA1_PONPY Breast cancer type 1 susceptibility protein homolog OS=Pongo
pygmaeus GN=BRCA1 PE=3 SV=1
Length = 1863
Score = 33.1 bits (74), Expect = 2.9, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 9 ILDSLKGIIIIFRLDNKLKERSELKRKKKEFESPSHQKTQSSSVPEELKRKK------KE 62
+++ L II F+LD L+ + KKE SP H K + S + R + E
Sbjct: 82 LVEELLKIICAFQLDTGLQYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRAKRLLQSE 141
Query: 63 FESPSHQKTQSS 74
E+PS Q+T S
Sbjct: 142 PENPSLQETSPS 153
>sp|Q6J6I8|BRCA1_GORGO Breast cancer type 1 susceptibility protein homolog OS=Gorilla
gorilla gorilla GN=BRCA1 PE=3 SV=1
Length = 1863
Score = 32.3 bits (72), Expect = 5.1, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 9 ILDSLKGIIIIFRLDNKLKERSELKRKKKEFESPSHQK-----TQSSSVPEELKR-KKKE 62
+++ L II F+LD L+ + KKE SP H K QS+ KR + E
Sbjct: 82 LVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSTGYRSRAKRLLQSE 141
Query: 63 FESPSHQKT 71
E+PS Q+T
Sbjct: 142 PENPSLQET 150
>sp|Q9GKK8|BRCA1_PANTR Breast cancer type 1 susceptibility protein homolog OS=Pan
troglodytes GN=BRCA1 PE=2 SV=2
Length = 1863
Score = 32.3 bits (72), Expect = 5.3, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 9 ILDSLKGIIIIFRLDNKLKERSELKRKKKEFESPSHQKTQSSSVPEELKRKK------KE 62
+++ L II F+LD L+ + KKE SP H K + S + R + E
Sbjct: 82 LVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRAKRLLQSE 141
Query: 63 FESPSHQKTQSS 74
E+PS Q+T S
Sbjct: 142 PENPSLQETSLS 153
>sp|P38398|BRCA1_HUMAN Breast cancer type 1 susceptibility protein OS=Homo sapiens
GN=BRCA1 PE=1 SV=2
Length = 1863
Score = 32.3 bits (72), Expect = 5.3, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 9 ILDSLKGIIIIFRLDNKLKERSELKRKKKEFESPSHQKTQSSSVPEELKRKK------KE 62
+++ L II F+LD L+ + KKE SP H K + S + R + E
Sbjct: 82 LVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRAKRLLQSE 141
Query: 63 FESPSHQKTQSS 74
E+PS Q+T S
Sbjct: 142 PENPSLQETSLS 153
>sp|Q2EG98|PK1L3_MOUSE Polycystic kidney disease protein 1-like 3 OS=Mus musculus GN=Pkd1l3
PE=2 SV=2
Length = 2201
Score = 32.0 bits (71), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 190 TLFSLLI---QSLFLVQTMLVSKLPLYLLSDSIGLIHMCLLYSLYAYEYKWYNQGWELHR 246
TL+SL + Q+ V +M++S L +S I +I + LL+SL A W N+ E H
Sbjct: 1560 TLYSLELDKDQATSWVISMMLSVLQDIFISQPIKVIFLTLLFSLMANHMPWLNKDKEQHA 1619
Query: 247 R 247
R
Sbjct: 1620 R 1620
>sp|D3ZWK4|LMBL1_RAT Lethal(3)malignant brain tumor-like protein 1 OS=Rattus norvegicus
GN=L3mbtl1 PE=3 SV=1
Length = 826
Score = 31.6 bits (70), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 10/54 (18%)
Query: 33 KRKKKEFESPSHQKTQSSSVPEELKRKKKEFESPSHQKTQSSSVPEENKVWKRT 86
KRK KE++SPS + S PE +K+ K + P + T +S EN+ W R+
Sbjct: 226 KRKHKEYQSPSEE-----SEPEAMKQGKG--KDPDREPTPGTS---ENEEWSRS 269
>sp|B2ZX90|FAS1_ORYSJ Chromatin assembly factor 1 subunit FSM OS=Oryza sativa subsp.
japonica GN=FSM PE=2 SV=1
Length = 940
Score = 31.6 bits (70), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 29 RSELKRKKKEFESPSHQKTQSSSVPEELKRK-KKEFESPSHQKTQSSSVPEENKVWKRTV 87
R + +R+K+E E Q+ Q +E KR+ K+E E+ QK Q +E K ++
Sbjct: 368 REQKRREKEEAEMKKQQRKQEEEAQKEQKRREKEEAETRKQQKKQQEEAEKEQKRREKEA 427
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.139 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,411,736
Number of Sequences: 539616
Number of extensions: 4703746
Number of successful extensions: 27598
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 27054
Number of HSP's gapped (non-prelim): 464
length of query: 333
length of database: 191,569,459
effective HSP length: 118
effective length of query: 215
effective length of database: 127,894,771
effective search space: 27497375765
effective search space used: 27497375765
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 61 (28.1 bits)