Query psy1741
Match_columns 333
No_of_seqs 98 out of 108
Neff 4.8
Searched_HMMs 13730
Date Fri Aug 16 21:47:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1741.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/1741hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1kq8a_ a.4.5.14 (A:) HFH-1 (H 10.9 63 0.0046 22.6 2.3 21 240-260 15-35 (75)
2 d3bpya1 a.4.5.14 (A:93-177) Af 9.5 78 0.0057 22.7 2.3 21 239-259 23-43 (85)
3 d1dlca3 f.1.3.1 (A:61-289) del 7.9 1.9E+02 0.014 23.4 4.6 22 201-222 11-32 (229)
4 d1q90g_ f.23.26.1 (G:) PetG su 7.4 82 0.006 18.5 1.3 18 201-218 5-22 (30)
5 d2hd9a1 b.122.1.8 (A:1-145) Hy 7.3 29 0.0021 27.0 -1.1 20 244-263 107-129 (145)
6 d2a07f1 a.4.5.14 (F:503-584) F 7.3 91 0.0066 22.1 1.8 35 218-260 7-41 (82)
7 d2hdca_ a.4.5.14 (A:) Genesis 7.0 1E+02 0.0074 22.4 2.0 35 218-260 7-41 (97)
8 d2pstx1 d.100.2.1 (X:8-68) Unc 6.4 93 0.0067 21.2 1.4 14 243-256 36-49 (61)
9 d1d5va_ a.4.5.14 (A:) Adipocyt 6.4 1.2E+02 0.0087 21.9 2.1 35 218-260 9-43 (94)
10 d2c6ya1 a.4.5.14 (A:1-98) Inte 5.7 1.2E+02 0.0086 22.1 1.8 35 218-260 8-42 (98)
No 1
>d1kq8a_ a.4.5.14 (A:) HFH-1 (HNF-3 forkhead homolog-1) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=10.92 E-value=63 Score=22.62 Aligned_cols=21 Identities=24% Similarity=0.504 Sum_probs=18.8
Q ss_pred CCcchHHHHHHHHhhchhhhc
Q psy1741 240 QGWELHRRLTFIEHNFPYFLG 260 (333)
Q Consensus 240 ~g~~L~~Rl~~~E~~WaYFlG 260 (333)
+..+|.+=-++||+++|||-+
T Consensus 15 ~~ltL~eIy~~i~~~fpy~r~ 35 (75)
T d1kq8a_ 15 GRLTLAEINEYLMGKFPFFRG 35 (75)
T ss_dssp SCBCHHHHHHHHHHHCTTGGG
T ss_pred CCccHHHHHHHHHHhCccccc
Confidence 568999999999999999964
No 2
>d3bpya1 a.4.5.14 (A:93-177) Afx (Foxo4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.48 E-value=78 Score=22.67 Aligned_cols=21 Identities=19% Similarity=0.453 Sum_probs=18.5
Q ss_pred cCCcchHHHHHHHHhhchhhh
Q psy1741 239 NQGWELHRRLTFIEHNFPYFL 259 (333)
Q Consensus 239 ~~g~~L~~Rl~~~E~~WaYFl 259 (333)
.+..+|.+=-++||+++|||=
T Consensus 23 ~~~ltL~eIY~~i~~~fPyyr 43 (85)
T d3bpya1 23 EKRLTLAQIYEWMVRTVPYFK 43 (85)
T ss_dssp TSCBCHHHHHHHHHHHCGGGT
T ss_pred CCCccHHHHHHHHHHhChhhh
Confidence 356899999999999999995
No 3
>d1dlca3 f.1.3.1 (A:61-289) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis tenebrionis, CRYIIIA (BT13) [TaxId: 1444]}
Probab=7.86 E-value=1.9e+02 Score=23.40 Aligned_cols=22 Identities=9% Similarity=-0.002 Sum_probs=17.3
Q ss_pred HHHHHHHhcccccchHHHHHHH
Q psy1741 201 LVQTMLVSKLPLYLLSDSIGLI 222 (333)
Q Consensus 201 llq~~lv~~iPip~IG~~l~fl 222 (333)
-+.+.+++.+++|.+|.+++++
T Consensus 11 ~i~~~il~~~~~P~~g~~~~~~ 32 (229)
T d1dlca3 11 SVVGDLLGVVGFPFGGALVSFY 32 (229)
T ss_dssp HHHHHHTTSCBSCCHHHHHHHH
T ss_pred HHHHHHHHhcCCCcHHHHHHHH
Confidence 4567778888888999988864
No 4
>d1q90g_ f.23.26.1 (G:) PetG subunit of the cytochrome b6f complex {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=7.38 E-value=82 Score=18.53 Aligned_cols=18 Identities=11% Similarity=0.209 Sum_probs=12.0
Q ss_pred HHHHHHHhcccccchHHH
Q psy1741 201 LVQTMLVSKLPLYLLSDS 218 (333)
Q Consensus 201 llq~~lv~~iPip~IG~~ 218 (333)
++.+.+++++|+...|-+
T Consensus 5 ll~GivlGlipiTl~Glf 22 (30)
T d1q90g_ 5 LLCGIVLGLVPVTIAGLF 22 (30)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHhhHHHHHHHHH
Confidence 355677889997655543
No 5
>d2hd9a1 b.122.1.8 (A:1-145) Hypothetical protein PH1033 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=7.29 E-value=29 Score=27.05 Aligned_cols=20 Identities=30% Similarity=0.570 Sum_probs=11.7
Q ss_pred hHHHHHHHHh--hc-hhhhchhh
Q psy1741 244 LHRRLTFIEH--NF-PYFLGFGL 263 (333)
Q Consensus 244 L~~Rl~~~E~--~W-aYFlGFG~ 263 (333)
|-.+|+|++. +| .|++|+|+
T Consensus 107 l~~~L~fi~~k~~W~~y~~r~g~ 129 (145)
T d2hd9a1 107 LINDLKFIKNKKRWSMHFFGKAM 129 (145)
T ss_dssp GGGGCTTCCCSTTGGGGTTTCSE
T ss_pred HHhHHHhhcCchhhhHHHhcCCc
Confidence 4455555554 67 56666664
No 6
>d2a07f1 a.4.5.14 (F:503-584) Forkhead box protein P2, FOXP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.29 E-value=91 Score=22.10 Aligned_cols=35 Identities=20% Similarity=0.369 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHhhcceeeecCCcchHHHHHHHHhhchhhhc
Q psy1741 218 SIGLIHMCLLYSLYAYEYKWYNQGWELHRRLTFIEHNFPYFLG 260 (333)
Q Consensus 218 ~l~fl~ms~LyS~YcFEYkW~~~g~~L~~Rl~~~E~~WaYFlG 260 (333)
...++.+++..| -.+..+|.+=-++||+++|||-+
T Consensus 7 Y~~LI~~Ai~~s--------p~~~LtL~eIy~~i~~~fpyyr~ 41 (82)
T d2a07f1 7 YATLIRQAIMES--------SDRQLTLNEIYSWFTRTFAYFRR 41 (82)
T ss_dssp HHHHHHHHHHHS--------TTSCBCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhC--------CCCCccHHHHHHHHHHhCccccc
Confidence 345556666544 24568999999999999999974
No 7
>d2hdca_ a.4.5.14 (A:) Genesis {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=6.95 E-value=1e+02 Score=22.43 Aligned_cols=35 Identities=34% Similarity=0.530 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHhhcceeeecCCcchHHHHHHHHhhchhhhc
Q psy1741 218 SIGLIHMCLLYSLYAYEYKWYNQGWELHRRLTFIEHNFPYFLG 260 (333)
Q Consensus 218 ~l~fl~ms~LyS~YcFEYkW~~~g~~L~~Rl~~~E~~WaYFlG 260 (333)
...++.+++..| -.+..+|.+=-++||+++|||-+
T Consensus 7 Y~~LI~~Ai~~s--------p~~~ltL~eIY~~i~~~fpyfr~ 41 (97)
T d2hdca_ 7 YIALITMAILQS--------PQKKLTLSGICEFISNRFPYYRE 41 (97)
T ss_dssp HHHHHHHHHHTC--------TTTCBCHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHhC--------CCcCccHHHHHHHHHHhCccccC
Confidence 445566666554 34568999989999999999954
No 8
>d2pstx1 d.100.2.1 (X:8-68) Uncharacterized protein PA2412 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=6.41 E-value=93 Score=21.20 Aligned_cols=14 Identities=21% Similarity=0.297 Sum_probs=11.4
Q ss_pred chHHHHHHHHhhch
Q psy1741 243 ELHRRLTFIEHNFP 256 (333)
Q Consensus 243 ~L~~Rl~~~E~~Wa 256 (333)
+-+..++|||++|.
T Consensus 36 ~r~~Cl~yIe~~Wt 49 (61)
T d2pstx1 36 LKKDCLAYIEEVWT 49 (61)
T ss_dssp CHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHhc
Confidence 44678999999995
No 9
>d1d5va_ a.4.5.14 (A:) Adipocyte-transcription factor FREAC-11 (s12, fkh-14) {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.36 E-value=1.2e+02 Score=21.94 Aligned_cols=35 Identities=26% Similarity=0.435 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHhhcceeeecCCcchHHHHHHHHhhchhhhc
Q psy1741 218 SIGLIHMCLLYSLYAYEYKWYNQGWELHRRLTFIEHNFPYFLG 260 (333)
Q Consensus 218 ~l~fl~ms~LyS~YcFEYkW~~~g~~L~~Rl~~~E~~WaYFlG 260 (333)
...++.+++..| -.+..+|.+=-++||+|+|||-.
T Consensus 9 Ya~LI~~AI~~s--------p~~~ltL~eIY~~i~~~fpyfr~ 43 (94)
T d1d5va_ 9 YIALITMAIQNA--------PEKKITLNGIYQFIMDRFPFYRE 43 (94)
T ss_dssp HHHHHHHHHHTC--------SSSSBCHHHHHHHHHHHCTHHHH
T ss_pred HHHHHHHHHHhC--------CCCCccHHHHHHHHHHHCCccCc
Confidence 445566666543 24569999999999999999963
No 10
>d2c6ya1 a.4.5.14 (A:1-98) Interleukin enhancer binding factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.74 E-value=1.2e+02 Score=22.09 Aligned_cols=35 Identities=23% Similarity=0.361 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHhhcceeeecCCcchHHHHHHHHhhchhhhc
Q psy1741 218 SIGLIHMCLLYSLYAYEYKWYNQGWELHRRLTFIEHNFPYFLG 260 (333)
Q Consensus 218 ~l~fl~ms~LyS~YcFEYkW~~~g~~L~~Rl~~~E~~WaYFlG 260 (333)
...++.|++..| -.+..+|.+=-++||+++|||-+
T Consensus 8 Y~~LI~~Ai~~s--------p~~~ltL~eIy~~i~~~fpyfr~ 42 (98)
T d2c6ya1 8 YAQLIVQAITMA--------PDKQLTLNGIYTHITKNYPYYRT 42 (98)
T ss_dssp HHHHHHHHHHTS--------TTSCEEHHHHHHHHHHHCTTSCT
T ss_pred HHHHHHHHHHhC--------CCCCccHHHHHHHHHHhCccccc
Confidence 445566666554 34578999999999999999953
Done!