RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy1741
         (333 letters)



>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC
          {Streptococcus pyogenes [TaxId: 1314]}
          Length = 152

 Score = 28.1 bits (61), Expect = 0.83
 Identities = 8/28 (28%), Positives = 14/28 (50%)

Query: 1  MGHALLKGILDSLKGIIIIFRLDNKLKE 28
          M  A++KG+  +   +II      + KE
Sbjct: 11 MASAIIKGLKQTPHELIISGSSLERSKE 38


>d1v3ya_ d.167.1.1 (A:) Peptide deformylase {Thermus thermophilus
           [TaxId: 274]}
          Length = 182

 Score = 27.0 bits (59), Expect = 2.4
 Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 1/29 (3%)

Query: 10  LDSLKGIIIIFRLDNKLKERSELKRKKKE 38
           +D L GI+   RL  K K  + L+  + E
Sbjct: 147 IDHLDGILFFERL-PKPKREAFLEANRAE 174


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.326    0.139    0.430 

Gapped
Lambda     K      H
   0.267   0.0442    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,209,340
Number of extensions: 53976
Number of successful extensions: 163
Number of sequences better than 10.0: 1
Number of HSP's gapped: 163
Number of HSP's successfully gapped: 15
Length of query: 333
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 247
Effective length of database: 1,226,816
Effective search space: 303023552
Effective search space used: 303023552
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 53 (24.9 bits)