Query psy17412
Match_columns 240
No_of_seqs 525 out of 1472
Neff 11.6
Searched_HMMs 29240
Date Fri Aug 16 21:49:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17412.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17412hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pl2_A Hypothetical conserved 100.0 9E-32 3.1E-36 192.9 20.0 185 43-239 2-197 (217)
2 3vtx_A MAMA; tetratricopeptide 100.0 6.9E-31 2.4E-35 183.6 19.6 174 44-228 3-176 (184)
3 4i17_A Hypothetical protein; T 100.0 2.5E-29 8.5E-34 181.5 21.3 191 44-238 5-225 (228)
4 2h6f_A Protein farnesyltransfe 100.0 1.2E-29 4.2E-34 195.5 20.4 188 41-239 92-286 (382)
5 4gyw_A UDP-N-acetylglucosamine 100.0 2.6E-29 8.8E-34 207.3 17.3 174 41-225 4-177 (723)
6 2pl2_A Hypothetical conserved 100.0 1.4E-28 4.6E-33 176.4 18.8 172 38-221 31-213 (217)
7 2h6f_A Protein farnesyltransfe 100.0 7.5E-28 2.6E-32 185.6 22.1 191 37-239 122-321 (382)
8 1w3b_A UDP-N-acetylglucosamine 100.0 7.5E-27 2.6E-31 181.2 27.6 200 38-237 59-281 (388)
9 4abn_A Tetratricopeptide repea 100.0 6.1E-28 2.1E-32 191.9 21.1 187 40-238 96-303 (474)
10 1w3b_A UDP-N-acetylglucosamine 100.0 5E-27 1.7E-31 182.2 25.5 200 39-238 162-384 (388)
11 2q7f_A YRRB protein; TPR, prot 100.0 4.3E-27 1.5E-31 170.9 21.0 189 38-237 49-237 (243)
12 4eqf_A PEX5-related protein; a 100.0 3E-27 1E-31 181.9 21.1 189 39-238 92-292 (365)
13 3uq3_A Heat shock protein STI1 100.0 1.6E-26 5.4E-31 169.2 22.2 183 44-237 36-257 (258)
14 3uq3_A Heat shock protein STI1 100.0 1.1E-26 3.8E-31 170.0 20.4 196 43-239 2-219 (258)
15 2vq2_A PILW, putative fimbrial 100.0 2.9E-26 9.8E-31 164.5 21.5 182 40-232 36-221 (225)
16 3hym_B Cell division cycle pro 100.0 1.9E-26 6.5E-31 174.6 21.6 198 41-238 85-315 (330)
17 3qky_A Outer membrane assembly 100.0 8.8E-27 3E-31 171.5 18.8 191 41-231 10-233 (261)
18 1fch_A Peroxisomal targeting s 100.0 1.3E-25 4.5E-30 172.7 24.9 190 38-238 90-341 (368)
19 3hym_B Cell division cycle pro 99.9 8.4E-26 2.9E-30 171.1 22.1 201 38-238 48-281 (330)
20 2ho1_A Type 4 fimbrial biogene 99.9 5.2E-26 1.8E-30 166.3 20.0 184 39-233 64-249 (252)
21 2ho1_A Type 4 fimbrial biogene 99.9 3.3E-25 1.1E-29 162.0 23.2 187 41-238 31-220 (252)
22 2q7f_A YRRB protein; TPR, prot 99.9 1.7E-26 5.7E-31 167.8 16.2 185 44-239 21-205 (243)
23 4eqf_A PEX5-related protein; a 99.9 2.8E-26 9.6E-31 176.5 17.9 190 38-238 125-338 (365)
24 3urz_A Uncharacterized protein 99.9 5E-26 1.7E-30 162.0 17.5 179 45-236 3-199 (208)
25 3ieg_A DNAJ homolog subfamily 99.9 1.6E-25 5.4E-30 171.3 21.3 189 45-233 2-228 (359)
26 1fch_A Peroxisomal targeting s 99.9 2.6E-25 8.8E-30 171.1 22.3 193 46-238 64-296 (368)
27 3u4t_A TPR repeat-containing p 99.9 6.4E-26 2.2E-30 167.6 17.3 182 45-238 2-187 (272)
28 3as5_A MAMA; tetratricopeptide 99.9 8.2E-26 2.8E-30 157.3 16.8 176 43-229 5-180 (186)
29 4ga2_A E3 SUMO-protein ligase 99.9 9.2E-27 3.2E-31 157.2 10.9 146 52-208 3-149 (150)
30 2vq2_A PILW, putative fimbrial 99.9 2.2E-24 7.5E-29 154.7 24.0 186 41-237 3-192 (225)
31 3ieg_A DNAJ homolog subfamily 99.9 2E-24 6.8E-29 165.2 25.3 166 38-203 29-232 (359)
32 2xpi_A Anaphase-promoting comp 99.9 1.3E-24 4.5E-29 177.3 25.2 193 42-239 403-596 (597)
33 3u4t_A TPR repeat-containing p 99.9 7E-25 2.4E-29 162.0 21.0 181 46-237 74-265 (272)
34 2pzi_A Probable serine/threoni 99.9 5.8E-26 2E-30 187.8 16.4 181 42-237 390-578 (681)
35 2y4t_A DNAJ homolog subfamily 99.9 4.2E-24 1.4E-28 168.6 25.6 182 41-233 55-251 (450)
36 2y4t_A DNAJ homolog subfamily 99.9 5.5E-25 1.9E-29 173.6 20.2 199 40-238 20-222 (450)
37 4gyw_A UDP-N-acetylglucosamine 99.9 1.4E-25 4.7E-30 185.2 16.9 153 75-238 4-156 (723)
38 3cv0_A Peroxisome targeting si 99.9 9.4E-25 3.2E-29 165.1 20.2 189 39-238 48-251 (327)
39 3vtx_A MAMA; tetratricopeptide 99.9 8.9E-25 3E-29 152.4 17.8 151 78-239 3-153 (184)
40 3cv0_A Peroxisome targeting si 99.9 1.5E-24 5.1E-29 164.0 20.2 189 39-238 82-297 (327)
41 4ga2_A E3 SUMO-protein ligase 99.9 2.4E-26 8.3E-31 155.1 8.7 144 85-239 2-146 (150)
42 2xpi_A Anaphase-promoting comp 99.9 1.4E-23 4.7E-28 171.3 25.3 189 40-239 367-562 (597)
43 2yhc_A BAMD, UPF0169 lipoprote 99.9 2.3E-24 8E-29 155.2 18.4 184 45-228 3-219 (225)
44 3mkr_A Coatomer subunit epsilo 99.9 5.7E-24 1.9E-28 158.8 18.9 175 43-233 98-275 (291)
45 1xnf_A Lipoprotein NLPI; TPR, 99.9 3.9E-23 1.3E-27 152.7 22.5 187 42-229 39-251 (275)
46 3mkr_A Coatomer subunit epsilo 99.9 1.8E-23 6.1E-28 156.1 19.8 181 42-238 61-245 (291)
47 4gco_A Protein STI-1; structur 99.9 4.8E-24 1.7E-28 139.5 14.3 123 105-238 4-126 (126)
48 2gw1_A Mitochondrial precursor 99.9 3E-23 1E-27 166.1 21.7 194 43-237 234-459 (514)
49 4abn_A Tetratricopeptide repea 99.9 5.7E-24 1.9E-28 169.1 15.4 169 38-218 129-317 (474)
50 3fp2_A TPR repeat-containing p 99.9 2E-23 7E-28 168.1 18.0 191 41-232 272-501 (537)
51 2gw1_A Mitochondrial precursor 99.9 4.6E-23 1.6E-27 165.0 19.8 195 40-235 265-491 (514)
52 4i17_A Hypothetical protein; T 99.9 2.2E-23 7.6E-28 150.2 16.2 151 77-238 4-164 (228)
53 2ond_A Cleavage stimulation fa 99.9 1.2E-22 4.2E-27 152.9 20.0 188 38-236 42-250 (308)
54 3fp2_A TPR repeat-containing p 99.9 7.9E-23 2.7E-27 164.7 20.1 159 39-197 303-500 (537)
55 4g1t_A Interferon-induced prot 99.9 2.6E-22 9E-27 159.3 22.6 194 44-237 49-291 (472)
56 4gco_A Protein STI-1; structur 99.9 3.6E-23 1.2E-27 135.3 14.5 119 40-169 7-125 (126)
57 2r5s_A Uncharacterized protein 99.9 5.9E-24 2E-28 147.3 10.8 166 44-221 4-172 (176)
58 2pzi_A Probable serine/threoni 99.9 2.4E-23 8.3E-28 172.2 15.7 157 40-208 427-583 (681)
59 2vsy_A XCC0866; transferase, g 99.9 4.2E-23 1.4E-27 167.8 16.0 163 59-232 2-167 (568)
60 3qou_A Protein YBBN; thioredox 99.9 8.3E-23 2.8E-27 152.3 15.4 169 42-221 113-283 (287)
61 3edt_B KLC 2, kinesin light ch 99.9 1.3E-22 4.4E-27 150.2 16.2 171 42-223 39-282 (283)
62 3nf1_A KLC 1, kinesin light ch 99.9 2.6E-22 8.9E-27 150.6 18.0 174 41-222 22-224 (311)
63 3gyz_A Chaperone protein IPGC; 99.9 3.6E-23 1.2E-27 139.1 10.7 121 96-227 18-138 (151)
64 1qqe_A Vesicular transport pro 99.9 1.3E-22 4.4E-27 151.7 14.8 179 46-229 37-235 (292)
65 3nf1_A KLC 1, kinesin light ch 99.9 8.1E-22 2.8E-26 147.9 19.2 174 41-225 64-310 (311)
66 3qky_A Outer membrane assembly 99.9 5.4E-22 1.9E-26 145.9 16.6 158 73-238 8-196 (261)
67 2ond_A Cleavage stimulation fa 99.9 3E-21 1E-25 145.4 20.8 176 42-228 95-276 (308)
68 1qqe_A Vesicular transport pro 99.9 3.4E-22 1.1E-26 149.4 14.8 191 44-238 75-285 (292)
69 1xnf_A Lipoprotein NLPI; TPR, 99.9 9.5E-23 3.2E-27 150.6 11.7 170 50-231 9-182 (275)
70 1ouv_A Conserved hypothetical 99.9 8.3E-21 2.8E-25 140.4 22.0 176 43-239 35-230 (273)
71 4g1t_A Interferon-induced prot 99.9 1.1E-22 3.9E-27 161.4 12.6 189 38-234 239-471 (472)
72 3ulq_A Response regulator aspa 99.9 6.2E-22 2.1E-26 153.4 16.3 172 48-224 105-295 (383)
73 1ouv_A Conserved hypothetical 99.9 4.3E-20 1.5E-24 136.5 24.4 168 44-230 72-259 (273)
74 3gyz_A Chaperone protein IPGC; 99.9 1.4E-22 4.7E-27 136.2 7.5 114 68-192 24-137 (151)
75 2vgx_A Chaperone SYCD; alterna 99.9 1.5E-21 5.2E-26 131.2 12.4 123 98-231 5-127 (148)
76 4a1s_A PINS, partner of inscut 99.9 4.8E-21 1.6E-25 149.5 15.5 191 42-237 44-273 (411)
77 3q15_A PSP28, response regulat 99.9 1.2E-20 4E-25 146.1 16.9 175 46-225 101-293 (378)
78 4a1s_A PINS, partner of inscut 99.9 3.1E-21 1.1E-25 150.5 13.7 187 46-237 86-313 (411)
79 3as5_A MAMA; tetratricopeptide 99.9 1.3E-20 4.5E-25 130.8 15.2 148 80-238 8-155 (186)
80 2c2l_A CHIP, carboxy terminus 99.9 2E-21 6.7E-26 144.4 10.8 177 44-222 2-199 (281)
81 3sf4_A G-protein-signaling mod 99.9 7.3E-21 2.5E-25 147.9 13.8 189 44-237 7-237 (406)
82 3sf4_A G-protein-signaling mod 99.9 1E-20 3.5E-25 147.0 14.0 191 42-237 83-317 (406)
83 1p5q_A FKBP52, FK506-binding p 99.9 9.4E-23 3.2E-27 155.2 2.3 179 58-238 77-275 (336)
84 2yhc_A BAMD, UPF0169 lipoprote 99.9 4.6E-20 1.6E-24 132.7 15.8 153 79-239 3-196 (225)
85 3qou_A Protein YBBN; thioredox 99.9 5.4E-20 1.8E-24 137.1 16.6 153 75-238 112-266 (287)
86 1p5q_A FKBP52, FK506-binding p 99.8 7.5E-22 2.6E-26 150.2 6.6 152 59-221 126-293 (336)
87 3ro2_A PINS homolog, G-protein 99.8 2.6E-20 9.1E-25 140.8 14.9 176 45-225 4-215 (338)
88 2xcb_A PCRH, regulatory protei 99.8 1.1E-20 3.8E-25 126.1 11.3 122 101-233 5-126 (142)
89 2ifu_A Gamma-SNAP; membrane fu 99.8 6E-20 2E-24 138.2 16.4 176 46-228 36-229 (307)
90 2ooe_A Cleavage stimulation fa 99.8 8.7E-20 3E-24 147.1 18.4 188 38-236 264-472 (530)
91 2fo7_A Synthetic consensus TPR 99.8 8E-20 2.7E-24 120.2 15.0 133 82-225 3-135 (136)
92 3edt_B KLC 2, kinesin light ch 99.8 1.3E-20 4.6E-25 139.3 12.5 158 57-222 12-198 (283)
93 2qfc_A PLCR protein; TPR, HTH, 99.8 3E-19 1E-23 133.5 19.8 175 42-223 71-267 (293)
94 3dra_A Protein farnesyltransfe 99.8 4.3E-19 1.5E-23 132.2 20.4 171 58-239 44-232 (306)
95 3urz_A Uncharacterized protein 99.8 9.5E-20 3.3E-24 129.5 15.8 151 38-201 30-198 (208)
96 2r5s_A Uncharacterized protein 99.8 2.1E-20 7E-25 129.4 12.0 151 76-238 2-155 (176)
97 3ulq_A Response regulator aspa 99.8 1.3E-19 4.4E-24 140.4 17.8 143 42-189 139-294 (383)
98 2vgx_A Chaperone SYCD; alterna 99.8 3.2E-21 1.1E-25 129.6 7.6 107 42-148 17-123 (148)
99 3ro2_A PINS homolog, G-protein 99.8 3.2E-20 1.1E-24 140.4 13.9 191 42-237 79-313 (338)
100 2fo7_A Synthetic consensus TPR 99.8 1.6E-19 5.4E-24 118.7 15.0 134 47-191 2-135 (136)
101 2e2e_A Formate-dependent nitri 99.8 1.1E-19 3.6E-24 125.9 14.4 129 91-230 21-152 (177)
102 3upv_A Heat shock protein STI1 99.8 1.7E-19 5.7E-24 117.8 14.5 118 43-171 1-124 (126)
103 3rjv_A Putative SEL1 repeat pr 99.8 2.9E-19 9.8E-24 127.3 16.8 174 44-236 16-209 (212)
104 3upv_A Heat shock protein STI1 99.8 1E-19 3.6E-24 118.8 13.4 117 111-238 1-123 (126)
105 1hh8_A P67PHOX, NCF-2, neutrop 99.8 2E-19 6.8E-24 128.0 15.6 145 45-192 5-154 (213)
106 2vsy_A XCC0866; transferase, g 99.8 9.9E-20 3.4E-24 148.0 15.4 150 40-200 17-169 (568)
107 3dra_A Protein farnesyltransfe 99.8 4.1E-18 1.4E-22 126.9 22.8 201 38-238 59-304 (306)
108 2xcb_A PCRH, regulatory protei 99.8 9.7E-21 3.3E-25 126.4 7.5 107 42-148 14-120 (142)
109 3q7a_A Farnesyltransferase alp 99.8 1.5E-18 5.3E-23 130.5 20.1 174 54-238 62-253 (349)
110 1dce_A Protein (RAB geranylger 99.8 2.6E-19 8.8E-24 144.7 16.8 172 57-239 39-238 (567)
111 1a17_A Serine/threonine protei 99.8 4.3E-19 1.5E-23 121.2 15.1 134 44-188 11-146 (166)
112 3u3w_A Transcriptional activat 99.8 1.6E-18 5.6E-23 129.5 18.3 176 44-223 73-267 (293)
113 1hh8_A P67PHOX, NCF-2, neutrop 99.8 6E-19 2E-23 125.5 15.0 134 81-228 7-156 (213)
114 3dss_A Geranylgeranyl transfer 99.8 3.6E-18 1.2E-22 127.9 19.6 172 56-238 39-238 (331)
115 3sz7_A HSC70 cochaperone (SGT) 99.8 6E-19 2E-23 120.6 14.0 110 41-150 6-115 (164)
116 2vyi_A SGTA protein; chaperone 99.8 1.7E-18 5.8E-23 113.2 15.6 125 41-176 7-131 (131)
117 3dss_A Geranylgeranyl transfer 99.8 9.4E-18 3.2E-22 125.7 21.0 186 38-234 56-279 (331)
118 2fbn_A 70 kDa peptidylprolyl i 99.8 2E-19 7E-24 126.7 11.5 158 81-238 5-167 (198)
119 3q15_A PSP28, response regulat 99.8 2.3E-18 8E-23 133.1 18.1 170 42-222 137-365 (378)
120 1a17_A Serine/threonine protei 99.8 1.3E-18 4.3E-23 118.8 14.3 132 80-222 13-146 (166)
121 2e2e_A Formate-dependent nitri 99.8 1.6E-19 5.3E-24 125.0 9.7 132 54-196 18-152 (177)
122 2fbn_A 70 kDa peptidylprolyl i 99.8 3.1E-20 1E-24 131.0 6.1 131 38-179 30-176 (198)
123 4gcn_A Protein STI-1; structur 99.8 1.7E-18 5.9E-23 113.2 13.9 104 43-146 5-115 (127)
124 4gcn_A Protein STI-1; structur 99.8 1.5E-18 5.2E-23 113.4 13.6 112 112-235 6-124 (127)
125 3rkv_A Putative peptidylprolyl 99.8 9.7E-19 3.3E-23 119.3 13.2 126 42-178 7-151 (162)
126 2lni_A Stress-induced-phosphop 99.8 1.7E-18 5.8E-23 113.7 13.1 122 42-174 12-133 (133)
127 2lni_A Stress-induced-phosphop 99.8 1.5E-18 5.2E-23 113.9 12.5 121 77-208 13-133 (133)
128 2ooe_A Cleavage stimulation fa 99.8 1E-17 3.4E-22 135.1 19.3 165 63-238 255-436 (530)
129 2hr2_A Hypothetical protein; a 99.8 1.1E-18 3.7E-23 116.2 11.0 106 45-150 10-138 (159)
130 3sz7_A HSC70 cochaperone (SGT) 99.8 2.2E-18 7.6E-23 117.7 12.8 111 79-200 10-120 (164)
131 1kt0_A FKBP51, 51 kDa FK506-bi 99.8 5.4E-20 1.9E-24 145.5 5.1 89 114-213 317-405 (457)
132 4f3v_A ESX-1 secretion system 99.8 8.1E-19 2.8E-23 128.1 10.0 186 38-234 32-248 (282)
133 2vyi_A SGTA protein; chaperone 99.8 1.6E-18 5.5E-23 113.3 10.6 122 77-209 9-130 (131)
134 3rjv_A Putative SEL1 repeat pr 99.8 5.8E-18 2E-22 120.5 14.0 157 63-238 3-173 (212)
135 1wao_1 Serine/threonine protei 99.8 3.5E-19 1.2E-23 141.5 7.7 139 43-192 3-154 (477)
136 3rkv_A Putative peptidylprolyl 99.8 1.7E-17 5.7E-22 113.1 14.5 124 113-237 10-142 (162)
137 1hxi_A PEX5, peroxisome target 99.8 4E-18 1.4E-22 110.4 10.6 102 47-148 18-119 (121)
138 2hr2_A Hypothetical protein; a 99.8 1.4E-18 4.6E-23 115.7 8.4 120 114-233 11-142 (159)
139 1kt0_A FKBP51, 51 kDa FK506-bi 99.8 7.7E-18 2.6E-22 133.3 14.2 130 41-181 263-407 (457)
140 3q49_B STIP1 homology and U bo 99.8 8.6E-18 2.9E-22 111.1 12.4 104 77-191 6-109 (137)
141 3gw4_A Uncharacterized protein 99.8 3.7E-17 1.3E-21 115.2 16.3 162 56-224 2-178 (203)
142 2c2l_A CHIP, carboxy terminus 99.8 1.9E-18 6.4E-23 128.3 10.0 147 77-236 1-178 (281)
143 1elw_A TPR1-domain of HOP; HOP 99.8 3.5E-17 1.2E-21 104.9 14.4 115 113-238 3-117 (118)
144 3q49_B STIP1 homology and U bo 99.8 1E-17 3.5E-22 110.7 11.8 105 42-146 5-109 (137)
145 1elw_A TPR1-domain of HOP; HOP 99.8 4.4E-17 1.5E-21 104.5 14.5 114 45-169 3-116 (118)
146 1na0_A Designed protein CTPR3; 99.8 3.9E-17 1.3E-21 105.7 13.3 105 46-150 9-113 (125)
147 1na0_A Designed protein CTPR3; 99.8 1.2E-16 3.9E-21 103.5 15.5 91 38-128 35-125 (125)
148 1hxi_A PEX5, peroxisome target 99.8 9.1E-18 3.1E-22 108.7 10.0 99 117-226 20-118 (121)
149 2if4_A ATFKBP42; FKBP-like, al 99.8 1.7E-18 5.7E-23 131.9 7.6 159 42-228 175-334 (338)
150 4f3v_A ESX-1 secretion system 99.7 1E-17 3.6E-22 122.2 11.1 181 45-238 6-219 (282)
151 2dba_A Smooth muscle cell asso 99.7 5.7E-17 2E-21 108.4 14.0 123 109-239 23-145 (148)
152 2xm6_A Protein corresponding t 99.7 3.7E-16 1.3E-20 124.8 21.0 173 46-237 255-450 (490)
153 2ifu_A Gamma-SNAP; membrane fu 99.7 4.6E-18 1.6E-22 127.9 9.3 136 85-226 41-188 (307)
154 3e4b_A ALGK; tetratricopeptide 99.7 1.3E-16 4.4E-21 126.1 16.7 172 45-238 175-365 (452)
155 2xm6_A Protein corresponding t 99.7 1.3E-15 4.4E-20 121.7 22.3 160 43-221 36-215 (490)
156 1elr_A TPR2A-domain of HOP; HO 99.7 1.4E-16 4.8E-21 104.0 13.9 119 44-174 2-127 (131)
157 3mv2_B Coatomer subunit epsilo 99.7 3.8E-16 1.3E-20 115.4 17.5 175 44-232 98-292 (310)
158 2if4_A ATFKBP42; FKBP-like, al 99.7 3E-18 1E-22 130.5 6.2 76 162-237 233-308 (338)
159 2xev_A YBGF; tetratricopeptide 99.7 1.4E-16 4.9E-21 104.1 13.5 104 47-150 3-112 (129)
160 2xev_A YBGF; tetratricopeptide 99.7 1.2E-16 4.2E-21 104.4 12.8 111 116-234 4-117 (129)
161 3q7a_A Farnesyltransferase alp 99.7 3E-16 1E-20 118.1 16.2 161 38-209 80-258 (349)
162 1ihg_A Cyclophilin 40; ppiase 99.7 8.1E-17 2.8E-21 123.9 13.4 126 44-180 221-362 (370)
163 2dba_A Smooth muscle cell asso 99.7 1E-16 3.5E-21 107.1 12.2 109 42-150 24-135 (148)
164 1hz4_A MALT regulatory protein 99.7 3.2E-16 1.1E-20 120.8 16.5 176 45-223 13-204 (373)
165 1dce_A Protein (RAB geranylger 99.7 1.4E-16 4.8E-21 128.7 15.0 163 38-211 55-244 (567)
166 1elr_A TPR2A-domain of HOP; HO 99.7 2.9E-16 9.9E-21 102.5 13.6 115 112-238 2-123 (131)
167 1wao_1 Serine/threonine protei 99.7 6.4E-19 2.2E-23 140.0 0.1 136 80-226 6-154 (477)
168 2kck_A TPR repeat; tetratricop 99.7 4E-17 1.4E-21 103.7 8.1 104 111-225 3-109 (112)
169 1zu2_A Mitochondrial import re 99.7 2.4E-16 8.1E-21 104.7 10.9 94 57-150 13-127 (158)
170 2kck_A TPR repeat; tetratricop 99.7 1.1E-16 3.8E-21 101.6 9.1 104 77-191 3-109 (112)
171 1ihg_A Cyclophilin 40; ppiase 99.7 2.7E-16 9.1E-21 121.0 11.9 125 80-215 223-363 (370)
172 3k9i_A BH0479 protein; putativ 99.7 5.1E-17 1.8E-21 104.6 6.8 93 58-150 2-97 (117)
173 3k9i_A BH0479 protein; putativ 99.7 1.1E-16 3.8E-21 103.0 8.1 98 92-200 2-102 (117)
174 1hz4_A MALT regulatory protein 99.7 3.2E-15 1.1E-19 115.2 17.6 174 46-225 53-247 (373)
175 3e4b_A ALGK; tetratricopeptide 99.7 1.3E-15 4.4E-20 120.4 15.5 171 45-238 140-329 (452)
176 1zu2_A Mitochondrial import re 99.7 3E-16 1E-20 104.2 10.0 100 125-235 13-133 (158)
177 3ro3_A PINS homolog, G-protein 99.7 1.7E-16 5.9E-21 107.4 9.1 100 44-143 7-118 (164)
178 3ro3_A PINS homolog, G-protein 99.7 8.4E-16 2.9E-20 104.0 11.1 141 80-225 9-161 (164)
179 1xi4_A Clathrin heavy chain; a 99.7 8.9E-15 3E-19 125.4 18.6 175 41-239 1100-1326(1630)
180 3gw4_A Uncharacterized protein 99.6 1.1E-15 3.9E-20 107.5 10.1 143 44-191 24-179 (203)
181 2qfc_A PLCR protein; TPR, HTH, 99.6 8.6E-15 3E-19 109.2 15.1 158 76-238 71-247 (293)
182 3u3w_A Transcriptional activat 99.6 1.4E-15 4.8E-20 113.5 10.5 137 48-189 117-267 (293)
183 4b4t_Q 26S proteasome regulato 99.6 3.2E-15 1.1E-19 117.3 10.5 172 47-223 5-205 (434)
184 3mv2_B Coatomer subunit epsilo 99.6 5.7E-14 1.9E-18 103.9 15.2 158 65-235 85-263 (310)
185 2l6j_A TPR repeat-containing p 99.6 2.1E-15 7.1E-20 95.8 3.9 95 45-139 3-103 (111)
186 2l6j_A TPR repeat-containing p 99.5 1E-14 3.5E-19 92.5 6.8 102 79-185 3-104 (111)
187 4e6h_A MRNA 3'-END-processing 99.5 6.1E-13 2.1E-17 109.2 17.2 187 38-235 335-549 (679)
188 2kat_A Uncharacterized protein 99.5 1.3E-13 4.6E-18 88.1 10.7 83 98-191 3-85 (115)
189 1b89_A Protein (clathrin heavy 99.5 3E-14 1E-18 109.9 8.6 168 44-239 59-253 (449)
190 1na3_A Designed protein CTPR2; 99.5 2.9E-13 1E-17 82.5 10.6 86 43-128 6-91 (91)
191 1xi4_A Clathrin heavy chain; a 99.5 4.6E-12 1.6E-16 109.0 21.2 155 52-219 1055-1247(1630)
192 4b4t_Q 26S proteasome regulato 99.5 2.5E-13 8.5E-18 106.6 12.7 173 45-222 54-245 (434)
193 2kat_A Uncharacterized protein 99.5 2.7E-13 9.4E-18 86.6 10.2 84 64-147 3-86 (115)
194 1b89_A Protein (clathrin heavy 99.5 2E-14 6.9E-19 110.8 4.7 145 44-219 30-174 (449)
195 1na3_A Designed protein CTPR2; 99.5 5E-13 1.7E-17 81.4 9.8 81 114-205 9-89 (91)
196 3n71_A Histone lysine methyltr 99.5 1.3E-12 4.5E-17 103.5 13.6 134 47-188 310-464 (490)
197 2kc7_A BFR218_protein; tetratr 99.4 2.3E-13 7.8E-18 84.5 5.5 91 50-148 4-95 (99)
198 4e6h_A MRNA 3'-END-processing 99.4 2.6E-11 9E-16 99.7 18.3 183 39-232 371-580 (679)
199 3ma5_A Tetratricopeptide repea 99.4 1E-12 3.4E-17 81.8 7.5 71 76-146 3-73 (100)
200 3n71_A Histone lysine methyltr 99.4 3.8E-12 1.3E-16 100.9 12.6 131 85-223 314-465 (490)
201 3ma5_A Tetratricopeptide repea 99.4 2.8E-12 9.6E-17 79.7 8.6 72 110-192 3-74 (100)
202 2kc7_A BFR218_protein; tetratr 99.4 5.2E-13 1.8E-17 82.8 5.0 91 118-227 4-95 (99)
203 3ly7_A Transcriptional activat 99.4 5.4E-11 1.8E-15 89.6 16.2 47 45-91 195-244 (372)
204 1klx_A Cysteine rich protein B 99.3 1.3E-11 4.5E-16 81.4 10.8 110 60-188 9-126 (138)
205 1klx_A Cysteine rich protein B 99.3 1.7E-11 5.9E-16 80.8 11.3 120 94-234 9-136 (138)
206 3ly7_A Transcriptional activat 99.3 2.5E-10 8.7E-15 86.0 14.5 152 71-228 185-345 (372)
207 1pc2_A Mitochondria fission pr 99.2 5.1E-10 1.7E-14 73.5 11.5 94 130-234 14-112 (152)
208 3u64_A Protein TP_0956; tetrat 99.2 1.8E-09 6.1E-14 78.4 14.0 108 108-226 146-273 (301)
209 3bee_A Putative YFRE protein; 99.1 3E-10 1E-14 69.2 8.4 72 156-227 3-77 (93)
210 3bee_A Putative YFRE protein; 99.1 5.3E-10 1.8E-14 68.1 8.6 72 76-147 2-76 (93)
211 3qwp_A SET and MYND domain-con 99.1 1.2E-09 3.9E-14 85.5 12.4 117 48-172 289-426 (429)
212 1pc2_A Mitochondria fission pr 99.1 2.1E-09 7.3E-14 70.6 11.4 90 61-150 13-107 (152)
213 3qww_A SET and MYND domain-con 99.1 3.4E-09 1.1E-13 82.8 14.5 102 125-234 309-428 (433)
214 3qww_A SET and MYND domain-con 99.1 1.3E-09 4.6E-14 85.1 11.3 96 55-150 307-423 (433)
215 3u64_A Protein TP_0956; tetrat 99.0 1.2E-08 4.1E-13 74.1 13.5 107 75-192 147-273 (301)
216 2v5f_A Prolyl 4-hydroxylase su 99.0 2.7E-09 9.4E-14 66.5 8.8 77 45-121 4-87 (104)
217 2v5f_A Prolyl 4-hydroxylase su 99.0 4.1E-09 1.4E-13 65.7 9.6 76 159-234 5-87 (104)
218 3qwp_A SET and MYND domain-con 99.0 1.6E-08 5.6E-13 79.0 14.7 104 121-232 294-415 (429)
219 2uy1_A Cleavage stimulation fa 98.9 4.1E-07 1.4E-11 72.6 19.9 173 41-234 208-391 (493)
220 2uy1_A Cleavage stimulation fa 98.8 6.4E-07 2.2E-11 71.5 18.7 190 44-237 12-256 (493)
221 4h7y_A Dual specificity protei 98.8 6.3E-07 2.1E-11 58.1 13.6 122 109-234 8-135 (161)
222 1nzn_A CGI-135 protein, fissio 98.8 2.5E-07 8.6E-12 58.6 11.4 95 128-233 15-114 (126)
223 4g26_A Pentatricopeptide repea 98.7 4E-06 1.4E-10 67.0 18.9 161 49-222 29-204 (501)
224 1nzn_A CGI-135 protein, fissio 98.6 1.4E-06 4.9E-11 55.2 11.9 91 60-150 15-110 (126)
225 4h7y_A Dual specificity protei 98.6 7.2E-06 2.5E-10 53.2 13.9 122 41-175 8-143 (161)
226 3ffl_A Anaphase-promoting comp 98.4 3.4E-06 1.2E-10 55.8 8.9 92 49-140 23-148 (167)
227 3ffl_A Anaphase-promoting comp 98.3 1.8E-06 6.1E-11 57.2 6.1 138 80-238 20-166 (167)
228 3o48_A Mitochondria fission 1 98.2 1.2E-05 4E-10 51.1 8.9 74 159-232 40-117 (134)
229 1y8m_A FIS1; mitochondria, unk 98.1 2.9E-05 1E-09 50.0 8.9 74 159-232 39-116 (144)
230 3o48_A Mitochondria fission 1 98.1 4E-05 1.4E-09 48.8 8.5 81 43-123 37-121 (134)
231 4g26_A Pentatricopeptide repea 97.9 0.00061 2.1E-08 54.5 15.6 143 82-236 28-184 (501)
232 1y8m_A FIS1; mitochondria, unk 97.9 0.00028 9.5E-09 45.5 10.9 73 44-116 37-113 (144)
233 4gns_B Protein CSD3, chitin bi 97.8 0.00031 1E-08 58.5 11.6 125 93-219 261-397 (754)
234 3txn_A 26S proteasome regulato 97.6 0.0036 1.2E-07 48.1 14.6 172 45-223 18-211 (394)
235 3kae_A CDC27, possible protein 97.6 0.0057 1.9E-07 40.7 17.6 173 43-225 30-240 (242)
236 4gns_B Protein CSD3, chitin bi 97.4 0.0046 1.6E-07 51.6 13.0 80 61-140 300-397 (754)
237 3mkq_B Coatomer subunit alpha; 97.3 0.01 3.5E-07 40.0 11.9 102 55-185 14-115 (177)
238 1zbp_A Hypothetical protein VP 97.3 0.0044 1.5E-07 44.6 10.6 120 89-226 6-133 (273)
239 3kae_A CDC27, possible protein 97.2 0.019 6.4E-07 38.3 11.9 78 57-142 13-90 (242)
240 3mkq_B Coatomer subunit alpha; 97.1 0.014 4.6E-07 39.4 10.6 47 89-140 14-60 (177)
241 2ff4_A Probable regulatory pro 97.0 0.014 4.8E-07 45.0 11.9 94 49-142 118-233 (388)
242 2ff4_A Probable regulatory pro 97.0 0.014 4.8E-07 45.0 11.8 101 121-221 122-233 (388)
243 1ya0_A SMG-7 transcript varian 96.9 0.0083 2.9E-07 47.7 10.0 80 47-126 153-232 (497)
244 1zbp_A Hypothetical protein VP 96.9 0.003 1E-07 45.5 6.6 70 168-237 6-75 (273)
245 3mkq_A Coatomer beta'-subunit; 96.9 0.012 4E-07 49.8 11.3 75 50-140 633-707 (814)
246 1ya0_A SMG-7 transcript varian 96.9 0.0043 1.5E-07 49.3 8.0 78 161-238 154-231 (497)
247 4b4t_P 26S proteasome regulato 96.8 0.1 3.4E-06 41.1 15.4 172 45-224 136-326 (445)
248 3mkq_A Coatomer beta'-subunit; 96.6 0.039 1.3E-06 46.6 12.7 103 54-185 660-762 (814)
249 4b4t_S RPN3, 26S proteasome re 96.6 0.014 4.9E-07 46.3 9.2 132 90-226 146-303 (523)
250 4b4t_R RPN7, 26S proteasome re 96.5 0.0057 2E-07 47.9 6.3 99 116-222 133-237 (429)
251 4fhn_B Nucleoporin NUP120; pro 96.3 0.24 8.1E-06 44.0 15.8 122 54-185 820-964 (1139)
252 4b4t_R RPN7, 26S proteasome re 96.2 0.013 4.5E-07 45.9 6.8 102 80-188 131-237 (429)
253 4fhn_B Nucleoporin NUP120; pro 96.2 0.12 4E-06 45.9 13.4 132 84-219 816-964 (1139)
254 3spa_A Mtrpol, DNA-directed RN 95.9 0.2 6.9E-06 43.5 12.7 100 44-143 125-230 (1134)
255 3spa_A Mtrpol, DNA-directed RN 95.8 0.13 4.3E-06 44.6 11.2 96 81-188 128-230 (1134)
256 4b4t_S RPN3, 26S proteasome re 95.4 0.1 3.5E-06 41.5 8.9 131 55-191 145-302 (523)
257 3txn_A 26S proteasome regulato 95.4 0.68 2.3E-05 35.7 20.0 96 50-145 103-212 (394)
258 4b4t_P 26S proteasome regulato 95.1 0.92 3.1E-05 35.7 16.7 172 43-222 53-247 (445)
259 1qsa_A Protein (soluble lytic 95.0 1.3 4.4E-05 36.5 14.8 123 87-221 221-347 (618)
260 2wpv_A GET4, UPF0363 protein Y 93.3 1.9 6.4E-05 32.1 13.6 63 160-222 135-217 (312)
261 1qsa_A Protein (soluble lytic 92.4 4 0.00014 33.6 18.4 157 56-216 262-436 (618)
262 3ax2_A Mitochondrial import re 91.4 1.1 3.7E-05 25.2 6.0 40 197-236 21-60 (73)
263 3lvg_A Clathrin heavy chain 1; 90.3 0.00078 2.7E-08 52.8 -9.9 138 50-216 148-285 (624)
264 4gq2_M Nucleoporin NUP120; bet 90.1 5 0.00017 35.0 11.8 91 52-146 816-929 (950)
265 3t5v_B Nuclear mRNA export pro 88.9 4.4 0.00015 31.9 9.8 99 128-226 140-254 (455)
266 3ax2_A Mitochondrial import re 86.8 2.6 8.9E-05 23.6 5.4 33 50-82 21-53 (73)
267 4gq2_M Nucleoporin NUP120; bet 86.6 5.1 0.00018 34.9 9.7 52 86-141 816-867 (950)
268 1om2_A Protein (mitochondrial 86.3 1.9 6.5E-05 25.6 4.9 37 197-233 24-60 (95)
269 3t5x_A PCI domain-containing p 85.1 3.7 0.00013 28.3 6.7 56 43-98 11-71 (203)
270 3t5v_B Nuclear mRNA export pro 84.2 3.1 0.00011 32.8 6.6 88 60-147 140-254 (455)
271 2v6y_A AAA family ATPase, P60 83.3 3.1 0.00011 24.0 4.8 31 45-75 10-40 (83)
272 2ijq_A Hypothetical protein; s 82.5 8.4 0.00029 25.5 7.2 60 49-108 35-103 (161)
273 2crb_A Nuclear receptor bindin 82.2 4 0.00014 24.0 4.8 30 46-75 15-44 (97)
274 1om2_A Protein (mitochondrial 80.6 4.1 0.00014 24.2 4.7 32 50-81 24-55 (95)
275 3t5x_A PCI domain-containing p 80.6 6.3 0.00021 27.2 6.5 53 159-211 14-71 (203)
276 4a5x_A MITD1, MIT domain-conta 80.4 4.6 0.00016 23.5 4.9 30 46-75 16-45 (86)
277 3esl_A Checkpoint serine/threo 79.6 13 0.00043 25.7 9.3 79 67-146 58-147 (202)
278 2crb_A Nuclear receptor bindin 78.5 6.1 0.00021 23.2 4.8 28 193-220 15-42 (97)
279 2cfu_A SDSA1; SDS-hydrolase, l 78.2 9.3 0.00032 31.8 7.8 56 43-98 446-501 (658)
280 2v6x_A Vacuolar protein sortin 78.2 5.6 0.00019 23.0 4.8 30 46-75 13-42 (85)
281 2vkj_A TM1634; membrane protei 77.2 8.5 0.00029 22.4 5.3 33 44-76 51-83 (106)
282 2w2u_A Hypothetical P60 katani 77.2 8.2 0.00028 22.2 7.2 31 45-75 18-48 (83)
283 1wfd_A Hypothetical protein 15 77.2 6.1 0.00021 23.3 4.8 28 48-75 17-44 (93)
284 2rpa_A Katanin P60 ATPase-cont 76.7 2.6 8.8E-05 24.0 2.9 26 162-187 15-40 (78)
285 2cwy_A Hypothetical protein TT 75.0 11 0.00036 22.4 6.6 56 51-108 6-67 (94)
286 2wpv_A GET4, UPF0363 protein Y 74.8 24 0.0008 26.3 12.2 27 191-217 132-158 (312)
287 2cpt_A SKD1 protein, vacuolar 74.5 7.2 0.00025 24.2 4.8 27 49-75 21-47 (117)
288 2rpa_A Katanin P60 ATPase-cont 73.9 3.9 0.00013 23.3 3.2 27 49-75 15-41 (78)
289 3mv2_A Coatomer subunit alpha; 72.6 27 0.00093 26.0 12.6 175 52-228 34-242 (325)
290 3esl_A Checkpoint serine/threo 71.4 22 0.00076 24.5 7.8 70 41-111 75-146 (202)
291 1wy6_A Hypothetical protein ST 69.0 21 0.00071 23.2 10.6 53 93-145 104-156 (172)
292 3bu8_A Telomeric repeat-bindin 67.9 11 0.00037 26.2 4.8 42 167-208 122-163 (235)
293 3bqo_A Telomeric repeat-bindin 67.5 8.5 0.00029 26.3 4.2 33 202-234 126-158 (211)
294 1g1e_B SIN3A; four-helix bundl 66.7 17 0.00057 21.3 5.4 63 175-237 10-86 (89)
295 2w2u_A Hypothetical P60 katani 64.9 14 0.00049 21.2 4.4 26 117-142 22-47 (83)
296 2cfu_A SDSA1; SDS-hydrolase, l 63.9 21 0.00071 29.7 6.8 45 195-239 451-495 (658)
297 2v6y_A AAA family ATPase, P60 62.2 15 0.0005 21.1 4.1 24 119-142 16-39 (83)
298 2ijq_A Hypothetical protein; s 61.1 33 0.0011 22.7 6.9 61 162-222 35-104 (161)
299 3mv2_A Coatomer subunit alpha; 61.1 49 0.0017 24.7 11.8 101 49-149 117-242 (325)
300 3mkr_B Coatomer subunit alpha; 60.8 49 0.0017 24.6 11.5 100 49-148 105-232 (320)
301 3re2_A Predicted protein; meni 60.6 45 0.0016 25.5 7.2 45 99-143 276-325 (472)
302 2dl1_A Spartin; SPG20, MIT, st 59.4 29 0.00098 21.4 5.5 26 48-73 24-49 (116)
303 3re2_A Predicted protein; meni 58.7 42 0.0015 25.6 6.8 61 161-221 257-324 (472)
304 4ady_A RPN2, 26S proteasome re 57.4 1E+02 0.0034 27.1 17.7 161 47-220 491-656 (963)
305 3bu8_A Telomeric repeat-bindin 56.7 16 0.00054 25.5 4.0 42 55-96 123-164 (235)
306 2e2a_A Protein (enzyme IIA); h 55.6 31 0.001 20.9 4.8 38 38-75 12-49 (105)
307 1wcr_A PTS system, N, N'-diace 55.1 32 0.0011 20.7 4.8 37 39-75 11-47 (103)
308 3bqo_A Telomeric repeat-bindin 54.5 15 0.00053 25.1 3.7 45 53-97 124-168 (211)
309 1wy6_A Hypothetical protein ST 54.2 42 0.0014 21.8 11.1 62 162-223 93-155 (172)
310 4aez_C MAD3, mitotic spindle c 53.8 54 0.0019 23.0 10.4 76 65-146 96-182 (223)
311 3lvg_A Clathrin heavy chain 1; 52.3 0.21 7.3E-06 39.6 -6.2 23 162-184 147-169 (624)
312 4ady_A RPN2, 26S proteasome re 52.3 1.2E+02 0.0042 26.6 15.4 162 45-220 412-587 (963)
313 3lpz_A GET4 (YOR164C homolog); 51.8 74 0.0025 23.9 14.6 155 46-221 35-215 (336)
314 3myv_A SUSD superfamily protei 51.3 33 0.0011 27.0 5.8 30 193-222 335-366 (454)
315 4a1g_A Mitotic checkpoint seri 51.1 48 0.0017 21.6 10.2 51 96-146 81-133 (152)
316 3u84_A Menin; MLL, JUND, ledgf 48.2 91 0.0031 24.4 7.2 45 99-143 298-347 (550)
317 3kez_A Putative sugar binding 47.9 37 0.0013 26.7 5.6 30 193-222 338-367 (461)
318 2vkj_A TM1634; membrane protei 47.1 41 0.0014 19.6 5.3 37 191-228 51-87 (106)
319 3myv_A SUSD superfamily protei 46.7 32 0.0011 27.0 5.1 32 191-222 188-219 (454)
320 3u84_A Menin; MLL, JUND, ledgf 46.5 83 0.0028 24.6 6.8 45 177-221 297-346 (550)
321 2cpt_A SKD1 protein, vacuolar 45.7 43 0.0015 20.7 4.5 22 121-142 25-46 (117)
322 3mcx_A SUSD superfamily protei 45.5 45 0.0015 26.3 5.8 33 191-223 200-232 (477)
323 4gq4_A Menin; tumor suppressor 45.5 1.1E+02 0.0036 24.0 7.2 47 97-143 281-332 (489)
324 4b4t_O 26S proteasome regulato 45.3 1E+02 0.0035 23.7 10.8 89 54-142 84-197 (393)
325 3lew_A SUSD-like carbohydrate 45.3 45 0.0015 26.6 5.7 29 193-222 347-375 (495)
326 3l8r_A PTCA, putative PTS syst 44.9 54 0.0019 20.4 6.2 38 38-75 29-66 (120)
327 3k1s_A PTS system, cellobiose- 44.2 53 0.0018 20.0 5.4 35 41-75 17-51 (109)
328 3lew_A SUSD-like carbohydrate 43.8 46 0.0016 26.5 5.6 33 191-223 201-233 (495)
329 3kez_A Putative sugar binding 43.5 37 0.0013 26.7 5.0 32 191-222 194-225 (461)
330 3mcx_A SUSD superfamily protei 43.4 41 0.0014 26.6 5.3 29 193-221 357-386 (477)
331 2dl1_A Spartin; SPG20, MIT, st 41.4 59 0.002 20.1 4.5 18 173-190 17-34 (116)
332 3lpz_A GET4 (YOR164C homolog); 40.6 1.1E+02 0.0039 22.9 20.3 97 41-137 50-159 (336)
333 2yhe_A SEC-alkyl sulfatase; hy 45.0 6.5 0.00022 32.8 0.0 55 44-98 459-513 (668)
334 2npu_A FKBP12-rapamycin comple 38.1 74 0.0025 20.0 6.6 57 52-108 46-102 (126)
335 3mkr_B Coatomer subunit alpha; 37.0 1.3E+02 0.0044 22.5 13.4 173 52-226 22-231 (320)
336 2xze_A STAM-binding protein; h 36.7 76 0.0026 20.5 4.8 31 45-75 39-69 (146)
337 4a1g_A Mitotic checkpoint seri 36.7 87 0.003 20.4 11.2 51 175-225 81-133 (152)
338 2cwy_A Hypothetical protein TT 36.5 65 0.0022 18.9 6.9 62 119-187 6-67 (94)
339 3eab_A Spastin; spastin, MIT, 36.0 50 0.0017 19.3 3.4 16 61-76 12-27 (89)
340 1ixm_A SPO0B, protein (sporula 35.4 93 0.0032 21.1 5.3 26 196-221 35-60 (192)
341 3qnk_A Putative lipoprotein; a 32.6 93 0.0032 24.9 5.7 30 193-222 392-421 (517)
342 2qx5_A Nucleoporin NIC96; mRNA 31.6 2.3E+02 0.0078 23.7 9.0 31 116-147 538-570 (661)
343 3jq1_A SUSD superfamily protei 30.5 69 0.0024 25.4 4.6 30 193-222 361-390 (481)
344 2p58_C Putative type III secre 29.7 96 0.0033 18.8 8.2 51 162-217 43-93 (116)
345 3hdx_A SUSD homolog, SUSD supe 27.7 90 0.0031 24.7 4.8 33 190-222 194-226 (478)
346 3snx_A SUSD homolog, putative 27.2 77 0.0026 24.9 4.4 34 190-223 188-221 (460)
347 2yhe_A SEC-alkyl sulfatase; hy 33.0 13 0.00046 30.9 0.0 52 161-212 463-514 (668)
348 1o9d_A 14-3-3-like protein C; 26.4 1.8E+02 0.0063 20.9 15.5 30 47-76 9-38 (260)
349 4b4t_O 26S proteasome regulato 26.3 2.2E+02 0.0075 21.8 10.3 100 121-221 83-197 (393)
350 2yin_A DOCK2, dedicator of cyt 26.0 1.6E+02 0.0054 23.1 5.8 29 162-190 95-123 (436)
351 2a9u_A Ubiquitin carboxyl-term 25.7 1.4E+02 0.0047 19.3 4.8 38 45-82 41-81 (144)
352 3qnk_A Putative lipoprotein; a 25.0 1.1E+02 0.0038 24.5 5.0 32 191-222 180-211 (517)
353 2ynq_A ESSB; membrane protein, 24.6 1.5E+02 0.0053 19.5 8.4 83 50-140 12-99 (161)
354 4aez_C MAD3, mitotic spindle c 24.5 1.9E+02 0.0063 20.3 11.5 50 175-224 130-181 (223)
355 3ubw_A 14-3-3E, 14-3-3 protein 24.3 2E+02 0.0069 20.7 13.7 32 47-78 32-63 (261)
356 1ixm_A SPO0B, protein (sporula 23.5 1.7E+02 0.0057 19.8 5.0 27 116-142 34-60 (192)
357 2br9_A 14-3-3E, 14-3-3 protein 23.4 2E+02 0.0068 20.3 15.8 32 47-78 6-37 (234)
358 4gq4_A Menin; tumor suppressor 23.3 2.7E+02 0.0094 21.9 9.5 59 176-234 281-350 (489)
359 2uwj_G Type III export protein 23.2 1.3E+02 0.0045 18.1 7.6 52 162-218 42-93 (115)
360 2ca5_A MXIH; transport protein 23.0 1.1E+02 0.0038 17.6 3.2 17 179-195 30-46 (85)
361 2cr7_A Paired amphipathic heli 21.6 1.2E+02 0.0041 17.1 4.7 63 174-237 9-73 (80)
362 3hdx_A SUSD homolog, SUSD supe 21.5 1.3E+02 0.0045 23.7 4.7 31 193-223 364-394 (478)
363 3s6n_M SurviVal motor neuron p 21.2 76 0.0026 14.7 2.3 15 130-144 18-32 (37)
364 3qtm_A Uncharacterized protein 20.5 2.5E+02 0.0087 20.5 10.2 31 62-92 101-131 (346)
365 3snx_A SUSD homolog, putative 20.4 1.2E+02 0.004 23.9 4.2 31 192-222 320-351 (460)
366 3iqu_A 14-3-3 protein sigma; s 20.4 2.3E+02 0.008 20.0 13.0 32 47-78 9-40 (236)
No 1
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=9e-32 Score=192.93 Aligned_cols=185 Identities=22% Similarity=0.238 Sum_probs=177.6
Q ss_pred hhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHH
Q psy17412 43 QDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKAR 122 (240)
Q Consensus 43 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 122 (240)
|.++..++.+|..+...|++++|+..|+++++.+|+++.++..+|.++...|++++|+..++++++++|+++.++..+|.
T Consensus 2 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~ 81 (217)
T 2pl2_A 2 QTAEQNPLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSE 81 (217)
T ss_dssp --CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 45677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHc-----------CCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChh
Q psy17412 123 AMHSL-----------GQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDED 191 (240)
Q Consensus 123 ~~~~~-----------~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~ 191 (240)
++..+ |++++|+..++++++++|+++.. +..+|.++...|++++|+..|+++++.+ +
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~-----------~~~lg~~~~~~g~~~~A~~~~~~al~~~-~ 149 (217)
T 2pl2_A 82 AYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPL-----------HLQRGLVYALLGERDKAEASLKQALALE-D 149 (217)
T ss_dssp HHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHTTCHHHHHHHHHHHHHHC-C
T ss_pred HHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHH-----------HHHHHHHHHHcCChHHHHHHHHHHHhcc-c
Confidence 99999 99999999999999999999888 9999999999999999999999999999 9
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhhc
Q psy17412 192 NMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFEQ 239 (240)
Q Consensus 192 ~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 239 (240)
++.++..+|.++..+|++++|+..|+++++.+|+++.++..++.++..
T Consensus 150 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~la~~~~~ 197 (217)
T 2pl2_A 150 TPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASALLL 197 (217)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHTC
T ss_pred chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999987653
No 2
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.98 E-value=6.9e-31 Score=183.55 Aligned_cols=174 Identities=16% Similarity=0.228 Sum_probs=168.3
Q ss_pred hHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHH
Q psy17412 44 DIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARA 123 (240)
Q Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 123 (240)
+++..|+.+|.++...|++++|+..|+++++.+|+++.++..+|.++...|++++|+..+.+++...|+++.++..+|.+
T Consensus 3 e~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 82 (184)
T 3vtx_A 3 ETTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSA 82 (184)
T ss_dssp -CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHH
Q psy17412 124 MHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAM 203 (240)
Q Consensus 124 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~ 203 (240)
+...++++.|...+.+++...|.+... +..+|.++...|++++|+..|+++++.+|+++.++..+|.++
T Consensus 83 ~~~~~~~~~a~~~~~~a~~~~~~~~~~-----------~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~ 151 (184)
T 3vtx_A 83 NFMIDEKQAAIDALQRAIALNTVYADA-----------YYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAY 151 (184)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCccchHH-----------HHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHH
Confidence 999999999999999999999998888 999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCcHH
Q psy17412 204 HNLGQREEAKEYIRELVEKYPTRRK 228 (240)
Q Consensus 204 ~~~g~~~~A~~~~~~~~~~~p~~~~ 228 (240)
..+|++++|+.+|+++++++|+++.
T Consensus 152 ~~~g~~~~A~~~~~~al~~~p~~a~ 176 (184)
T 3vtx_A 152 EGKGLRDEAVKYFKKALEKEEKKAK 176 (184)
T ss_dssp HHTTCHHHHHHHHHHHHHTTHHHHH
T ss_pred HHCCCHHHHHHHHHHHHhCCccCHH
Confidence 9999999999999999999998754
No 3
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.97 E-value=2.5e-29 Score=181.53 Aligned_cols=191 Identities=15% Similarity=0.193 Sum_probs=176.7
Q ss_pred hHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcC-CChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHH
Q psy17412 44 DIADHFKANGNKAFQSGQYEAALVQYDKAIEQVR-DSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKAR 122 (240)
Q Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~-~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 122 (240)
.++..++.+|..++..|++++|+..|+++++.+| .+..+++.+|.++...|++++|+..++++++.+|+++.++..+|.
T Consensus 5 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 84 (228)
T 4i17_A 5 TDPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSA 84 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHH
Confidence 3468999999999999999999999999999998 888999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChh--hHHHHHHHH
Q psy17412 123 AMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDED--NMKAHLYKA 200 (240)
Q Consensus 123 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~--~~~~~~~la 200 (240)
++..+|++++|+..+++++++.|+++.. ......++..+|.++...|++++|+..|+++++.+|+ ++.++..+|
T Consensus 85 ~~~~~~~~~~A~~~~~~al~~~p~~~~~----~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~ 160 (228)
T 4i17_A 85 AYRDMKNNQEYIATLTEGIKAVPGNATI----EKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLG 160 (228)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCHHH----HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHCCCcHHH----HHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHH
Confidence 9999999999999999999999998732 0111234999999999999999999999999999999 999999999
Q ss_pred HHHHHcCCH---------------------------HHHHHHHHHHHHhCCCcHHHHHHHHHhhh
Q psy17412 201 RAMHNLGQR---------------------------EEAKEYIRELVEKYPTRRKLVENYTQAFE 238 (240)
Q Consensus 201 ~~~~~~g~~---------------------------~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 238 (240)
.++...|+. ++|+.+++++++++|+++.+...++++..
T Consensus 161 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~i~~ 225 (228)
T 4i17_A 161 VLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTLSPNRTEIKQMQDQVKA 225 (228)
T ss_dssp HHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHH
Confidence 999999998 99999999999999999999998887754
No 4
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.97 E-value=1.2e-29 Score=195.53 Aligned_cols=188 Identities=14% Similarity=0.165 Sum_probs=179.0
Q ss_pred hchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccC-cCchHHHHHHHHhcCcccHHHHHH
Q psy17412 41 ARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQL-YDPVLPDCDKALRLDEDNMKAHLY 119 (240)
Q Consensus 41 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~-~~~A~~~~~~~~~~~~~~~~~~~~ 119 (240)
..|....++..+|.++...|++++|+..|++++..+|++..+|..+|.++..+|+ +++|+..|++++.++|++..+|+.
T Consensus 92 ~~p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~ 171 (382)
T 2h6f_A 92 YSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHH 171 (382)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CChhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 3567889999999999999999999999999999999999999999999999997 999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHH
Q psy17412 120 KARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYK 199 (240)
Q Consensus 120 la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l 199 (240)
+|.++..+|++++|+..|+++++++|++... |.++|.++...|++++|+.+++++++++|++..+|.++
T Consensus 172 ~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a-----------~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~l 240 (382)
T 2h6f_A 172 RRVLVEWLRDPSQELEFIADILNQDAKNYHA-----------WQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQR 240 (382)
T ss_dssp HHHHHHHHTCCTTHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHhCccCHHH-----------HHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 9999999999999999999999999999888 99999999999999999999999999999999999999
Q ss_pred HHHHHH-cCCHHHH-----HHHHHHHHHhCCCcHHHHHHHHHhhhc
Q psy17412 200 ARAMHN-LGQREEA-----KEYIRELVEKYPTRRKLVENYTQAFEQ 239 (240)
Q Consensus 200 a~~~~~-~g~~~~A-----~~~~~~~~~~~p~~~~~~~~l~~~~~~ 239 (240)
|.++.. .|..++| +.+|++++.++|++..+|..++.++.+
T Consensus 241 g~~l~~l~~~~~eA~~~~el~~~~~Al~l~P~~~~a~~~l~~ll~~ 286 (382)
T 2h6f_A 241 YFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQD 286 (382)
T ss_dssp HHHHHHTTCSCSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHTT
T ss_pred HHHHHHhcCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHc
Confidence 999999 5554788 599999999999999999999987753
No 5
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.97 E-value=2.6e-29 Score=207.31 Aligned_cols=174 Identities=17% Similarity=0.134 Sum_probs=168.1
Q ss_pred hchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHH
Q psy17412 41 ARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYK 120 (240)
Q Consensus 41 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 120 (240)
..|++++++.++|.++...|++++|+..|+++++.+|++..++.++|.++..+|++++|+..|+++++++|+++.++.++
T Consensus 4 s~P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nL 83 (723)
T 4gyw_A 4 SCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNM 83 (723)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHH
Q psy17412 121 ARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKA 200 (240)
Q Consensus 121 a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la 200 (240)
|.++..+|++++|+..|+++++++|++... +.++|.++...|++++|+..|+++++++|+++.++.++|
T Consensus 84 g~~l~~~g~~~~A~~~~~kAl~l~P~~~~a-----------~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~ 152 (723)
T 4gyw_A 84 GNTLKEMQDVQGALQCYTRAIQINPAFADA-----------HSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLA 152 (723)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHH-----------HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhh
Confidence 999999999999999999999999999888 999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCC
Q psy17412 201 RAMHNLGQREEAKEYIRELVEKYPT 225 (240)
Q Consensus 201 ~~~~~~g~~~~A~~~~~~~~~~~p~ 225 (240)
.++..+|++++|.+.+++++++.|+
T Consensus 153 ~~l~~~g~~~~A~~~~~kal~l~~~ 177 (723)
T 4gyw_A 153 HCLQIVCDWTDYDERMKKLVSIVAD 177 (723)
T ss_dssp HHHHHTTCCTTHHHHHHHHHHHHHH
T ss_pred hHHHhcccHHHHHHHHHHHHHhChh
Confidence 9999999999999999999987654
No 6
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.97 E-value=1.4e-28 Score=176.39 Aligned_cols=172 Identities=17% Similarity=0.130 Sum_probs=151.8
Q ss_pred HHHhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc-----------cCcCchHHHHHHH
Q psy17412 38 ERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHL-----------QLYDPVLPDCDKA 106 (240)
Q Consensus 38 ~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~-----------~~~~~A~~~~~~~ 106 (240)
.....|+.+.+++.+|.++...|++++|+..|+++++.+|+++.++..+|.++... |++++|+..++++
T Consensus 31 al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a 110 (217)
T 2pl2_A 31 ALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDA 110 (217)
T ss_dssp HHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHh
Q psy17412 107 LRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKAL 186 (240)
Q Consensus 107 ~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l 186 (240)
++++|+++.++..+|.++..+|++++|+..|+++++++ +++.. +.++|.++...|++++|+..|++++
T Consensus 111 l~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~-----------~~~la~~~~~~g~~~~A~~~~~~al 178 (217)
T 2pl2_A 111 ERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEI-----------RSALAELYLSMGRLDEALAQYAKAL 178 (217)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHH-----------HHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHH-----------HHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 87777 9999999999999999999999999
Q ss_pred hcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17412 187 RLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVE 221 (240)
Q Consensus 187 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~ 221 (240)
+.+|+++.++..+|.++..+|++++|+..|+++-.
T Consensus 179 ~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~ 213 (217)
T 2pl2_A 179 EQAPKDLDLRVRYASALLLKGKAEEAARAAALEHH 213 (217)
T ss_dssp HHSTTCHHHHHHHHHHHTC----------------
T ss_pred HhCCCChHHHHHHHHHHHHccCHHHHHHHHHHHhh
Confidence 99999999999999999999999999999987653
No 7
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.96 E-value=7.5e-28 Score=185.59 Aligned_cols=191 Identities=12% Similarity=0.116 Sum_probs=180.1
Q ss_pred HHHHhchhHHHHHHHhHhHHHHhCC-HHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHH
Q psy17412 37 EERKARQDIADHFKANGNKAFQSGQ-YEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMK 115 (240)
Q Consensus 37 ~~~~~~~~~~~~~~~~a~~~~~~~~-~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 115 (240)
.....+|....+|..+|.++...|+ +++|+..|++++..+|++..+|+++|.++..+|++++|+..|+++++++|++..
T Consensus 122 ~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~ 201 (382)
T 2h6f_A 122 DAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYH 201 (382)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHH
T ss_pred HHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHH
Confidence 3566789999999999999999997 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHH-hcccCch-----hhHHHHHhhcC
Q psy17412 116 AHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLH-LQLYDPV-----LPDCDKALRLD 189 (240)
Q Consensus 116 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A-----~~~~~~~l~~~ 189 (240)
+|+.+|.++..+|++++|+.+++++++++|++... |.++|.++.. .|.+++| +.++.++++++
T Consensus 202 a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a-----------~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l~ 270 (382)
T 2h6f_A 202 AWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSV-----------WNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLV 270 (382)
T ss_dssp HHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHH-----------HHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999888 9999999999 5665888 59999999999
Q ss_pred hhhHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCcHHHHHHHHHhhhc
Q psy17412 190 EDNMKAHLYKARAMHNLG--QREEAKEYIRELVEKYPTRRKLVENYTQAFEQ 239 (240)
Q Consensus 190 ~~~~~~~~~la~~~~~~g--~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 239 (240)
|++..+|.+++.++...| ++++|++.+.++ ..+|+++.++..++.++.+
T Consensus 271 P~~~~a~~~l~~ll~~~g~~~~~~a~~~~~~~-~~~p~~~~al~~La~~~~~ 321 (382)
T 2h6f_A 271 PHNESAWNYLKGILQDRGLSKYPNLLNQLLDL-QPSHSSPYLIAFLVDIYED 321 (382)
T ss_dssp TTCHHHHHHHHHHHTTTCGGGCHHHHHHHHHH-TTTCCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHccCccchHHHHHHHHHh-ccCCCCHHHHHHHHHHHHH
Confidence 999999999999999988 699999999998 9999999999998887653
No 8
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.96 E-value=7.5e-27 Score=181.21 Aligned_cols=200 Identities=21% Similarity=0.178 Sum_probs=135.8
Q ss_pred HHHhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHH
Q psy17412 38 ERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAH 117 (240)
Q Consensus 38 ~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 117 (240)
.....|..+..+..+|.++...|++++|+..|++++..+|++..++..+|.++...|++++|+..|+++++.+|++..++
T Consensus 59 a~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 138 (388)
T 1w3b_A 59 AIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVR 138 (388)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHH
T ss_pred HHhcCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHH
Confidence 34556778888888888888888888888888888888888888888888888888888888888888888777777777
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHH-----------------------HHHhccCchHHHHHHHHHHHHhcc
Q psy17412 118 LYKARAMHSLGQREEAKEYVRQLVEKYPTRRKL-----------------------AIEQVRDSPVLYTNRALTLLHLQL 174 (240)
Q Consensus 118 ~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~-----------------------~~~~~~~~~~~~~~la~~~~~~~~ 174 (240)
..+|.++..+|++++|+..|+++++..|++... ++...|..+..+..+|.++...|+
T Consensus 139 ~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~ 218 (388)
T 1w3b_A 139 SDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARI 218 (388)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCC
Confidence 777777777777777777777777777765433 222334444555555555555555
Q ss_pred cCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhh
Q psy17412 175 YDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAF 237 (240)
Q Consensus 175 ~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~ 237 (240)
+++|+..+.++++.+|+++.++..+|.++...|++++|+..|++++..+|+++.++..++.++
T Consensus 219 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 281 (388)
T 1w3b_A 219 FDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANAL 281 (388)
T ss_dssp TTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Confidence 555555555555555555555555555555555555555555555555555555555554443
No 9
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.96 E-value=6.1e-28 Score=191.90 Aligned_cols=187 Identities=14% Similarity=0.056 Sum_probs=179.7
Q ss_pred HhchhHHHHHHHhHhHHHHhCCH-HHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHH
Q psy17412 40 KARQDIADHFKANGNKAFQSGQY-EAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHL 118 (240)
Q Consensus 40 ~~~~~~~~~~~~~a~~~~~~~~~-~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 118 (240)
...+..+..++.+|.++...|++ ++|+..|+++++.+|+++.+|..+|.+|...|++++|+..|+++++++|+ ..++.
T Consensus 96 ~~~~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~ 174 (474)
T 4abn_A 96 GSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQ 174 (474)
T ss_dssp TTCCCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHH
T ss_pred ccCchhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHH
Confidence 34567899999999999999999 99999999999999999999999999999999999999999999999999 69999
Q ss_pred HHHHHHHHc---------CCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHh--------cccCchhhH
Q psy17412 119 YKARAMHSL---------GQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHL--------QLYDPVLPD 181 (240)
Q Consensus 119 ~la~~~~~~---------~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~--------~~~~~A~~~ 181 (240)
.+|.++..+ |++++|+..++++++++|++... +..+|.++... |++++|+..
T Consensus 175 ~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~-----------~~~lg~~~~~~~~~~~~~~g~~~~A~~~ 243 (474)
T 4abn_A 175 NLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRS-----------WYILGNAYLSLYFNTGQNPKISQQALSA 243 (474)
T ss_dssp HHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHH-----------HHHHHHHHHHHHHhhccccchHHHHHHH
Confidence 999999999 99999999999999999998888 99999999999 999999999
Q ss_pred HHHHhhcCh---hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhh
Q psy17412 182 CDKALRLDE---DNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFE 238 (240)
Q Consensus 182 ~~~~l~~~~---~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 238 (240)
|+++++.+| +++.++..+|.++..+|++++|+..|+++++++|+++.++..++.++.
T Consensus 244 ~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~ 303 (474)
T 4abn_A 244 YAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLE 303 (474)
T ss_dssp HHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 999999999 999999999999999999999999999999999999999998888764
No 10
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.96 E-value=5e-27 Score=182.18 Aligned_cols=200 Identities=18% Similarity=0.126 Sum_probs=166.5
Q ss_pred HHhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHH
Q psy17412 39 RKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHL 118 (240)
Q Consensus 39 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 118 (240)
....|..+..+..+|.++...|++++|+..|++++..+|++..++..+|.++...|++++|+..+++++..+|+++.++.
T Consensus 162 l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 241 (388)
T 1w3b_A 162 IETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHG 241 (388)
T ss_dssp HHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHH
Confidence 44567778888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCCchHH-----------------------HHHhccCchHHHHHHHHHHHHhccc
Q psy17412 119 YKARAMHSLGQREEAKEYVRQLVEKYPTRRKL-----------------------AIEQVRDSPVLYTNRALTLLHLQLY 175 (240)
Q Consensus 119 ~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~-----------------------~~~~~~~~~~~~~~la~~~~~~~~~ 175 (240)
.+|.++...|++++|+..++++++..|+++.. ++...|.++..+..+|.++...|++
T Consensus 242 ~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~ 321 (388)
T 1w3b_A 242 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNI 321 (388)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCH
Confidence 88888888888888888888888888877654 2344566667788888888888888
Q ss_pred CchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhh
Q psy17412 176 DPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFE 238 (240)
Q Consensus 176 ~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 238 (240)
++|+..++++++.+|++..++..+|.++...|++++|+..|+++++.+|+++.++..++.++.
T Consensus 322 ~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~a~~~lg~~~~ 384 (388)
T 1w3b_A 322 EEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLK 384 (388)
T ss_dssp HHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHhHHHHHH
Confidence 888888888888888888888888888888888888888888888888888888888887764
No 11
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.96 E-value=4.3e-27 Score=170.90 Aligned_cols=189 Identities=17% Similarity=0.145 Sum_probs=179.8
Q ss_pred HHHhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHH
Q psy17412 38 ERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAH 117 (240)
Q Consensus 38 ~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 117 (240)
.....|.....+..+|.++...|++++|+..++++++..|.+..++..+|.++...|++++|+..++++++..|.++.++
T Consensus 49 ~l~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 128 (243)
T 2q7f_A 49 AIEENKEDAIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLF 128 (243)
T ss_dssp HHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHH
T ss_pred HHHhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHH
Confidence 34567888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHH
Q psy17412 118 LYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHL 197 (240)
Q Consensus 118 ~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~ 197 (240)
..+|.++...|++++|+..++++++..|.+... +..+|.++...|++++|+..++++++..|++..++.
T Consensus 129 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~-----------~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 197 (243)
T 2q7f_A 129 YMLGTVLVKLEQPKLALPYLQRAVELNENDTEA-----------RFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFY 197 (243)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHhCCccHHH-----------HHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHH
Confidence 999999999999999999999999999998777 999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhh
Q psy17412 198 YKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAF 237 (240)
Q Consensus 198 ~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~ 237 (240)
.+|.++...|++++|+.+++++++.+|+++.++..++.+.
T Consensus 198 ~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l~ 237 (243)
T 2q7f_A 198 NAGVTYAYKENREKALEMLDKAIDIQPDHMLALHAKKLLG 237 (243)
T ss_dssp HHHHHHHHTTCTTHHHHHHHHHHHHCTTCHHHHHHHTC--
T ss_pred HHHHHHHHccCHHHHHHHHHHHHccCcchHHHHHHHHHHH
Confidence 9999999999999999999999999999999998887654
No 12
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.96 E-value=3e-27 Score=181.94 Aligned_cols=189 Identities=12% Similarity=0.038 Sum_probs=143.2
Q ss_pred HHhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHH
Q psy17412 39 RKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHL 118 (240)
Q Consensus 39 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 118 (240)
....|..+.++..+|.++...|++++|+..|+++++.+|++..++..+|.++...|++++|+..++++++..|++...+.
T Consensus 92 l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 171 (365)
T 4eqf_A 92 ILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVK 171 (365)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC--
T ss_pred HHhCcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHh
Confidence 34456666667777777777777777777777777777766666777777777777777777777777766666554444
Q ss_pred HH----------HHHHHHcCCHHHHHHHHHHHHHcCCC--chHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHh
Q psy17412 119 YK----------ARAMHSLGQREEAKEYVRQLVEKYPT--RRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKAL 186 (240)
Q Consensus 119 ~l----------a~~~~~~~~~~~A~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l 186 (240)
.+ |.++...|++++|+..++++++..|. ++.. +..+|.++...|++++|+..+++++
T Consensus 172 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~-----------~~~l~~~~~~~g~~~~A~~~~~~al 240 (365)
T 4eqf_A 172 NKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDL-----------QTGLGVLFHLSGEFNRAIDAFNAAL 240 (365)
T ss_dssp -----------------CCHHHHHHHHHHHHHHHHSCSSCCHHH-----------HHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHH-----------HHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 33 66666667777777777777776666 4444 9999999999999999999999999
Q ss_pred hcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhh
Q psy17412 187 RLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFE 238 (240)
Q Consensus 187 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 238 (240)
+.+|+++.++..+|.++...|++++|+.+|+++++.+|+++.++..++.++.
T Consensus 241 ~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 292 (365)
T 4eqf_A 241 TVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCI 292 (365)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988764
No 13
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.6e-26 Score=169.24 Aligned_cols=183 Identities=19% Similarity=0.282 Sum_probs=173.5
Q ss_pred hHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCC-------hHHHHHHHHHHHHccCcCchHHHHHHHHh--------
Q psy17412 44 DIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDS-------PVLYTNRALTLLHLQLYDPVLPDCDKALR-------- 108 (240)
Q Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~-------~~~~~~la~~~~~~~~~~~A~~~~~~~~~-------- 108 (240)
..+..+..+|.++...|++++|+..++++++..|+. +.++..+|.++...|++++|+..+++++.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 115 (258)
T 3uq3_A 36 KDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADIL 115 (258)
T ss_dssp CCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHH
T ss_pred ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHH
Confidence 678899999999999999999999999999998876 68999999999999999999999999998
Q ss_pred ------------------cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHH
Q psy17412 109 ------------------LDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLL 170 (240)
Q Consensus 109 ------------------~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~ 170 (240)
.+|.++.++..+|.++...|++++|+..++++++..|.++.. +..+|.++.
T Consensus 116 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~-----------~~~l~~~~~ 184 (258)
T 3uq3_A 116 TKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARG-----------YSNRAAALA 184 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHH-----------HHHHHHHHH
Confidence 778888999999999999999999999999999999998777 999999999
Q ss_pred HhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCcHHHHHHHHHhh
Q psy17412 171 HLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKY------PTRRKLVENYTQAF 237 (240)
Q Consensus 171 ~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~------p~~~~~~~~l~~~~ 237 (240)
..|++++|+..++++++.+|+++.++..+|.++..+|++++|+.+++++++++ |.+..++..+.+++
T Consensus 185 ~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~~~ 257 (258)
T 3uq3_A 185 KLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKAS 257 (258)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHTT
T ss_pred HhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhcCCCchHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999 99999999888765
No 14
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.1e-26 Score=170.04 Aligned_cols=196 Identities=18% Similarity=0.186 Sum_probs=179.4
Q ss_pred hhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCccc-------HH
Q psy17412 43 QDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN-------MK 115 (240)
Q Consensus 43 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-------~~ 115 (240)
+..+..+..+|..++..|++++|+.+|+++++.+ .++.++..+|.++...|++++|+..++++++..|.. +.
T Consensus 2 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 80 (258)
T 3uq3_A 2 GSMADKEKAEGNKFYKARQFDEAIEHYNKAWELH-KDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISK 80 (258)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-CCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred chHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHH
Confidence 3467899999999999999999999999999999 889999999999999999999999999999998876 78
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHH---------------HHHhccCchHHHHHHHHHHHHhcccCchhh
Q psy17412 116 AHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKL---------------AIEQVRDSPVLYTNRALTLLHLQLYDPVLP 180 (240)
Q Consensus 116 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~---------------~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 180 (240)
++..+|.++...|++++|+..+++++++.|..... .+...|..+.++..+|.++...|++++|+.
T Consensus 81 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 160 (258)
T 3uq3_A 81 SFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVK 160 (258)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHH
Confidence 99999999999999999999999999988763211 222445567789999999999999999999
Q ss_pred HHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhhc
Q psy17412 181 DCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFEQ 239 (240)
Q Consensus 181 ~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 239 (240)
.++++++.+|+++.++..+|.++...|++++|+.+++++++.+|+++.++..++.++.+
T Consensus 161 ~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 219 (258)
T 3uq3_A 161 AYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA 219 (258)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999987653
No 15
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.95 E-value=2.9e-26 Score=164.53 Aligned_cols=182 Identities=18% Similarity=0.083 Sum_probs=115.2
Q ss_pred HhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc-cCcCchHHHHHHHHh--cCcccHHH
Q psy17412 40 KARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHL-QLYDPVLPDCDKALR--LDEDNMKA 116 (240)
Q Consensus 40 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~-~~~~~A~~~~~~~~~--~~~~~~~~ 116 (240)
...|.....+..+|.++...|++++|+..+++++...|.+..++..+|.++... |++++|+..+++++. ..|....+
T Consensus 36 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 115 (225)
T 2vq2_A 36 KSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIA 115 (225)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHH
T ss_pred HhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHH
Confidence 344555666666666666666666666666666666666666666666666666 666666666666666 44555566
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcCh-hhHHH
Q psy17412 117 HLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDE-DNMKA 195 (240)
Q Consensus 117 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~-~~~~~ 195 (240)
+..+|.++...|++++|+..++++++..|.+... +..+|.++...|++++|+..++++++..| .+...
T Consensus 116 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~-----------~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 184 (225)
T 2vq2_A 116 NLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPA-----------FKELARTKMLAGQLGDADYYFKKYQSRVEVLQADD 184 (225)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHH-----------HHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchH-----------HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHH
Confidence 6666666666666666666666666666665554 66666666666666666666666666666 66666
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHH
Q psy17412 196 HLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVEN 232 (240)
Q Consensus 196 ~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~ 232 (240)
+..++.++...|+.++|..+++.+.+.+|+++.+...
T Consensus 185 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~p~~~~~~~~ 221 (225)
T 2vq2_A 185 LLLGWKIAKALGNAQAAYEYEAQLQANFPYSEELQTV 221 (225)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 6666666666666666666666666666666655443
No 16
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.95 E-value=1.9e-26 Score=174.64 Aligned_cols=198 Identities=16% Similarity=0.069 Sum_probs=139.2
Q ss_pred hchhHHHHHHHhHhHHHHhC-CHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHH
Q psy17412 41 ARQDIADHFKANGNKAFQSG-QYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLY 119 (240)
Q Consensus 41 ~~~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 119 (240)
..|..+..+..+|.++...| ++++|+..|++++..+|+++.++..+|.++...|++++|+..+++++...|++..++..
T Consensus 85 ~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 164 (330)
T 3hym_B 85 LYPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLY 164 (330)
T ss_dssp HCTTSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHH
T ss_pred hCcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHH
Confidence 34445555555555555555 55555555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCchHH-----------------------HHHhc---------cCchHHHHHHHH
Q psy17412 120 KARAMHSLGQREEAKEYVRQLVEKYPTRRKL-----------------------AIEQV---------RDSPVLYTNRAL 167 (240)
Q Consensus 120 la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~-----------------------~~~~~---------~~~~~~~~~la~ 167 (240)
+|.++...|++++|+..++++++..|++... ++... +..+.++..+|.
T Consensus 165 l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~ 244 (330)
T 3hym_B 165 IGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGH 244 (330)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHH
Confidence 5555555555555555555555555554333 11111 344567999999
Q ss_pred HHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhh
Q psy17412 168 TLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFE 238 (240)
Q Consensus 168 ~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 238 (240)
++...|++++|+..++++++.+|++..++..+|.++..+|++++|+.+|+++++.+|+++.++..++.+++
T Consensus 245 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 315 (330)
T 3hym_B 245 VCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIE 315 (330)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999874
No 17
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.95 E-value=8.8e-27 Score=171.53 Aligned_cols=191 Identities=14% Similarity=0.123 Sum_probs=167.8
Q ss_pred hchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCC---hHHHHHHHHHHHHccCcCchHHHHHHHHhcCcc---cH
Q psy17412 41 ARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDS---PVLYTNRALTLLHLQLYDPVLPDCDKALRLDED---NM 114 (240)
Q Consensus 41 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~---~~ 114 (240)
..+..+..++.+|..++..|+|++|+..|++++..+|++ +.+++.+|.++...|++++|+..|+++++..|+ .+
T Consensus 10 ~~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~ 89 (261)
T 3qky_A 10 LRHSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVP 89 (261)
T ss_dssp -CCSSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhH
Confidence 456788999999999999999999999999999999998 889999999999999999999999999999874 46
Q ss_pred HHHHHHHHHHHH--------cCCHHHHHHHHHHHHHcCCCchHHH------HHhccCchHHHHHHHHHHHHhcccCchhh
Q psy17412 115 KAHLYKARAMHS--------LGQREEAKEYVRQLVEKYPTRRKLA------IEQVRDSPVLYTNRALTLLHLQLYDPVLP 180 (240)
Q Consensus 115 ~~~~~la~~~~~--------~~~~~~A~~~~~~a~~~~~~~~~~~------~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 180 (240)
.+++.+|.++.. +|++++|+..|+++++..|+++... ..........++.+|.++...|++++|+.
T Consensus 90 ~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 169 (261)
T 3qky_A 90 QAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAV 169 (261)
T ss_dssp HHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHH
Confidence 789999999999 9999999999999999999986550 00001111223899999999999999999
Q ss_pred HHHHHhhcChh---hHHHHHHHHHHHHHc----------CCHHHHHHHHHHHHHhCCCcHHHHH
Q psy17412 181 DCDKALRLDED---NMKAHLYKARAMHNL----------GQREEAKEYIRELVEKYPTRRKLVE 231 (240)
Q Consensus 181 ~~~~~l~~~~~---~~~~~~~la~~~~~~----------g~~~~A~~~~~~~~~~~p~~~~~~~ 231 (240)
.|+++++..|+ .+.+++.+|.++..+ |++++|+..|+++++.+|+++.+..
T Consensus 170 ~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~ 233 (261)
T 3qky_A 170 TYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDSPLLRT 233 (261)
T ss_dssp HHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHCTTCTHHHH
T ss_pred HHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHCCCChHHHH
Confidence 99999999998 678999999999977 9999999999999999999965433
No 18
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.95 E-value=1.3e-25 Score=172.72 Aligned_cols=190 Identities=14% Similarity=0.118 Sum_probs=160.1
Q ss_pred HHHhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcc-----
Q psy17412 38 ERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDED----- 112 (240)
Q Consensus 38 ~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~----- 112 (240)
.....|..+..+..+|.++...|++++|+..|+++++.+|+++.++..+|.++...|++++|+..+++++...|.
T Consensus 90 al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~ 169 (368)
T 1fch_A 90 AVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLV 169 (368)
T ss_dssp HHHSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGC
T ss_pred HHHhCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHH
Confidence 445678888999999999999999999999999999999999999999999999998888888888777765543
Q ss_pred ----------------------------------------------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q psy17412 113 ----------------------------------------------NMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPT 146 (240)
Q Consensus 113 ----------------------------------------------~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~ 146 (240)
.+.++..+|.++...|++++|+..++++++..|+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 249 (368)
T 1fch_A 170 TPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN 249 (368)
T ss_dssp C---------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC
Confidence 4566777777777777777777777777777777
Q ss_pred chHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Q psy17412 147 RRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTR 226 (240)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~ 226 (240)
++.. +..+|.++...|++++|+..++++++.+|+++.++..+|.++..+|++++|+.+|++++.+.|++
T Consensus 250 ~~~~-----------~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 250 DYLL-----------WNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp CHHH-----------HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred CHHH-----------HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC
Confidence 6666 88899999999999999999999999889888889999999999999999999999999888877
Q ss_pred -----------HHHHHHHHHhhh
Q psy17412 227 -----------RKLVENYTQAFE 238 (240)
Q Consensus 227 -----------~~~~~~l~~~~~ 238 (240)
..++..++.++.
T Consensus 319 ~~~~~~~~~~~~~~~~~l~~~~~ 341 (368)
T 1fch_A 319 RGPRGEGGAMSENIWSTLRLALS 341 (368)
T ss_dssp ------CCCCCHHHHHHHHHHHH
T ss_pred CCccccccchhhHHHHHHHHHHH
Confidence 778888877654
No 19
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.95 E-value=8.4e-26 Score=171.11 Aligned_cols=201 Identities=10% Similarity=0.004 Sum_probs=186.9
Q ss_pred HHHhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHcc-CcCchHHHHHHHHhcCcccHHH
Q psy17412 38 ERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQ-LYDPVLPDCDKALRLDEDNMKA 116 (240)
Q Consensus 38 ~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~-~~~~A~~~~~~~~~~~~~~~~~ 116 (240)
.....|.....+..++.++...|++++|+..++++++.+|+++.++..+|.++...| ++++|+..+++++..+|.++.+
T Consensus 48 ~l~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 127 (330)
T 3hym_B 48 VMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPA 127 (330)
T ss_dssp HHHHCTTCTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHH
T ss_pred HHHcCCCChhhHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHH
Confidence 445678888899999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHH-----------------------HHHhccCchHHHHHHHHHHHHhc
Q psy17412 117 HLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKL-----------------------AIEQVRDSPVLYTNRALTLLHLQ 173 (240)
Q Consensus 117 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~-----------------------~~~~~~~~~~~~~~la~~~~~~~ 173 (240)
+..+|.++...|++++|+..++++++..|++... ++...|.++.++..+|.++...|
T Consensus 128 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~ 207 (330)
T 3hym_B 128 WIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNG 207 (330)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcc
Confidence 9999999999999999999999999999986554 34556778899999999999999
Q ss_pred ccCchhhHHHHHhhcC---------hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhh
Q psy17412 174 LYDPVLPDCDKALRLD---------EDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFE 238 (240)
Q Consensus 174 ~~~~A~~~~~~~l~~~---------~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 238 (240)
++++|+..++++++.. |..+.++..+|.++...|++++|+.+++++++.+|+++.++..++.++.
T Consensus 208 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~ 281 (330)
T 3hym_B 208 EWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHS 281 (330)
T ss_dssp CHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccchHHHHHHHHHHH
Confidence 9999999999999886 6667899999999999999999999999999999999999999998764
No 20
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.95 E-value=5.2e-26 Score=166.29 Aligned_cols=184 Identities=17% Similarity=0.097 Sum_probs=156.8
Q ss_pred HHhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHh--cCcccHHH
Q psy17412 39 RKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALR--LDEDNMKA 116 (240)
Q Consensus 39 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~--~~~~~~~~ 116 (240)
....+..+..+..+|.++...|++++|++.|+++++.+|.+..++..+|.++...|++++|+..+++++. ..|.+..+
T Consensus 64 l~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~ 143 (252)
T 2ho1_A 64 LEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRV 143 (252)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHH
T ss_pred HhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHH
Confidence 3446677888888888888888888888888888888888888888888888888888888888888888 77778888
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHH
Q psy17412 117 HLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAH 196 (240)
Q Consensus 117 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~ 196 (240)
+..+|.++...|++++|+..++++++..|.+... +..+|.++...|++++|+..++++++..|.+...+
T Consensus 144 ~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~-----------~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~ 212 (252)
T 2ho1_A 144 FENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSV-----------ALEMADLLYKEREYVPARQYYDLFAQGGGQNARSL 212 (252)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHH-----------HHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHH-----------HHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHH
Confidence 8888888888888888888888888888887666 88888888888999999999998888888888888
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy17412 197 LYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENY 233 (240)
Q Consensus 197 ~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l 233 (240)
..++.++...|++++|..+++++++.+|+++..+..+
T Consensus 213 ~~~~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l 249 (252)
T 2ho1_A 213 LLGIRLAKVFEDRDTAASYGLQLKRLYPGSLEYQEFQ 249 (252)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTSHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 8888888889999999999999888888888776544
No 21
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.95 E-value=3.3e-25 Score=161.99 Aligned_cols=187 Identities=19% Similarity=0.129 Sum_probs=176.9
Q ss_pred hchhH-HHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHH
Q psy17412 41 ARQDI-ADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLY 119 (240)
Q Consensus 41 ~~~~~-~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 119 (240)
.+|.. +..++.+|..+...|++++|+..|++++..+|.+..++..+|.++...|++++|+..+++++...|.+..++..
T Consensus 31 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 110 (252)
T 2ho1_A 31 KGRDEARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNN 110 (252)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHH
Confidence 44544 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHH--cCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHH
Q psy17412 120 KARAMHSLGQREEAKEYVRQLVE--KYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHL 197 (240)
Q Consensus 120 la~~~~~~~~~~~A~~~~~~a~~--~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~ 197 (240)
+|.++...|++++|+..++++++ ..|.+... +..+|.++...|++++|+..++++++..|.+..++.
T Consensus 111 la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~-----------~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~ 179 (252)
T 2ho1_A 111 YGGFLYEQKRYEEAYQRLLEASQDTLYPERSRV-----------FENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVAL 179 (252)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHH-----------HHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhCccCcccHHH-----------HHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHH
Confidence 99999999999999999999999 77776666 999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhh
Q psy17412 198 YKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFE 238 (240)
Q Consensus 198 ~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 238 (240)
.+|.++...|++++|+.++++++...|.+...+..++.++.
T Consensus 180 ~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (252)
T 2ho1_A 180 EMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRLAK 220 (252)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999998888887654
No 22
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.95 E-value=1.7e-26 Score=167.81 Aligned_cols=185 Identities=21% Similarity=0.208 Sum_probs=158.8
Q ss_pred hHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHH
Q psy17412 44 DIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARA 123 (240)
Q Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 123 (240)
..+..++.+|..+...|++++|+..|+++++.+|++..++..+|.++...|++++|+..+++++...|.+..++..+|.+
T Consensus 21 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 100 (243)
T 2q7f_A 21 MASMTGGQQMGRGSEFGDYEKAAEAFTKAIEENKEDAIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNV 100 (243)
T ss_dssp ---------------------CCTTHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHH
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHH
Q psy17412 124 MHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAM 203 (240)
Q Consensus 124 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~ 203 (240)
+...|++++|+..++++++..|.+... +..+|.++...|++++|+..++++++..|++..++..+|.++
T Consensus 101 ~~~~~~~~~A~~~~~~~~~~~~~~~~~-----------~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 169 (243)
T 2q7f_A 101 YVVKEMYKEAKDMFEKALRAGMENGDL-----------FYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCL 169 (243)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTCCSHHH-----------HHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHHHHHhCCCCHHH-----------HHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 999999999999999999999998777 999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhhc
Q psy17412 204 HNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFEQ 239 (240)
Q Consensus 204 ~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 239 (240)
...|++++|+..+++++...|+++.++..++.++.+
T Consensus 170 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 205 (243)
T 2q7f_A 170 ANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAY 205 (243)
T ss_dssp HHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH
Confidence 999999999999999999999999999999887643
No 23
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.95 E-value=2.8e-26 Score=176.53 Aligned_cols=190 Identities=13% Similarity=0.061 Sum_probs=168.5
Q ss_pred HHHhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHH----------HHHHHHccCcCchHHHHHHHH
Q psy17412 38 ERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNR----------ALTLLHLQLYDPVLPDCDKAL 107 (240)
Q Consensus 38 ~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l----------a~~~~~~~~~~~A~~~~~~~~ 107 (240)
.....|..+.++..+|.++...|++++|+..|+++++..|++...+..+ |.++...|++++|+..+++++
T Consensus 125 al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 204 (365)
T 4eqf_A 125 CLELQPNNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAA 204 (365)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHH
T ss_pred HHhcCCCCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 3455788899999999999999999999999999999999876666555 999999999999999999999
Q ss_pred hcCcc--cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHH
Q psy17412 108 RLDED--NMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKA 185 (240)
Q Consensus 108 ~~~~~--~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 185 (240)
...|. ++.++..+|.++...|++++|+..++++++..|+++.. +..+|.++...|++++|+..|+++
T Consensus 205 ~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~-----------~~~l~~~~~~~g~~~~A~~~~~~a 273 (365)
T 4eqf_A 205 HQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSL-----------WNRLGATLANGDRSEEAVEAYTRA 273 (365)
T ss_dssp HHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHH-----------HHHHHHHHHHcCCHHHHHHHHHHH
Confidence 99999 89999999999999999999999999999999998877 999999999999999999999999
Q ss_pred hhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------------cHHHHHHHHHhhh
Q psy17412 186 LRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPT------------RRKLVENYTQAFE 238 (240)
Q Consensus 186 l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~------------~~~~~~~l~~~~~ 238 (240)
++.+|+++.++..+|.++..+|++++|+.+|++++++.|+ +..++..++.++.
T Consensus 274 l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 338 (365)
T 4eqf_A 274 LEIQPGFIRSRYNLGISCINLGAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALS 338 (365)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHH
T ss_pred HhcCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999887 3567777777653
No 24
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.95 E-value=5e-26 Score=161.96 Aligned_cols=179 Identities=13% Similarity=0.086 Sum_probs=157.6
Q ss_pred HHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHH----------------HHHHHHHccCcCchHHHHHHHHh
Q psy17412 45 IADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTN----------------RALTLLHLQLYDPVLPDCDKALR 108 (240)
Q Consensus 45 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~----------------la~~~~~~~~~~~A~~~~~~~~~ 108 (240)
.++.++..|..++..|++++|+..|++++..+|+++.+++. +|.++...|++++|+..|+++++
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 82 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQ 82 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999 99999999999999999999999
Q ss_pred cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcc--cCchhhHHHHHh
Q psy17412 109 LDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQL--YDPVLPDCDKAL 186 (240)
Q Consensus 109 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~--~~~A~~~~~~~l 186 (240)
++|+++.++..+|.++..+|++++|+..|+++++++|+++.. +.++|.++...|+ ...+...+.+++
T Consensus 83 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a-----------~~~lg~~~~~~~~~~~~~~~~~~~~~~ 151 (208)
T 3urz_A 83 KAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAA-----------NIFLGNYYYLTAEQEKKKLETDYKKLS 151 (208)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHH-----------HHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999888 9999999987654 456677788877
Q ss_pred hcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHh
Q psy17412 187 RLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQA 236 (240)
Q Consensus 187 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~ 236 (240)
...|. ..+++.+|.++...|++++|+.+|+++++++|+.. ....+.++
T Consensus 152 ~~~~~-~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~-~~~~l~~i 199 (208)
T 3urz_A 152 SPTKM-QYARYRDGLSKLFTTRYEKARNSLQKVILRFPSTE-AQKTLDKI 199 (208)
T ss_dssp CCCHH-HHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCHH-HHHHHHHH
T ss_pred CCCch-hHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHH-HHHHHHHH
Confidence 65554 34678899999999999999999999999999753 44455554
No 25
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.95 E-value=1.6e-25 Score=171.32 Aligned_cols=189 Identities=22% Similarity=0.286 Sum_probs=146.7
Q ss_pred HHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHH
Q psy17412 45 IADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAM 124 (240)
Q Consensus 45 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 124 (240)
+++.++.+|..++..|++++|+..|+++++.+|+++.++..+|.++...|++++|+..++++++..|++..++..+|.++
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 81 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLL 81 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHHcCC---CchHH-----------------------------------HHHhccCchHHHHHHH
Q psy17412 125 HSLGQREEAKEYVRQLVEKYP---TRRKL-----------------------------------AIEQVRDSPVLYTNRA 166 (240)
Q Consensus 125 ~~~~~~~~A~~~~~~a~~~~~---~~~~~-----------------------------------~~~~~~~~~~~~~~la 166 (240)
...|++++|+..++++++..| ++... ++...|..+.++..+|
T Consensus 82 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 161 (359)
T 3ieg_A 82 LKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRA 161 (359)
T ss_dssp HHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 999999999999999999999 65544 1222344455555555
Q ss_pred HHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy17412 167 LTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENY 233 (240)
Q Consensus 167 ~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l 233 (240)
.++...|++++|+..++++++..|+++.++..+|.++...|++++|+..++++++.+|+++..+..+
T Consensus 162 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 228 (359)
T 3ieg_A 162 ECFIKEGEPRKAISDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHY 228 (359)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCccchHHHHHH
Confidence 5555555555555555555555555555555555555555555555555555555555555544433
No 26
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.94 E-value=2.6e-25 Score=171.09 Aligned_cols=193 Identities=17% Similarity=0.120 Sum_probs=180.5
Q ss_pred HHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHH
Q psy17412 46 ADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMH 125 (240)
Q Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 125 (240)
...++.+|..+...|++++|+..|+++++.+|+++.++..+|.++...|++++|+..++++++.+|+++.++..+|.++.
T Consensus 64 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 143 (368)
T 1fch_A 64 HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFT 143 (368)
T ss_dssp CSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHHcCCCchHH--------------------------------------HHHhccC--chHHHHHH
Q psy17412 126 SLGQREEAKEYVRQLVEKYPTRRKL--------------------------------------AIEQVRD--SPVLYTNR 165 (240)
Q Consensus 126 ~~~~~~~A~~~~~~a~~~~~~~~~~--------------------------------------~~~~~~~--~~~~~~~l 165 (240)
..|++++|+..++++++..|.+... ++...|. .+.++..+
T Consensus 144 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l 223 (368)
T 1fch_A 144 NESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGL 223 (368)
T ss_dssp HTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcccHHHHHHH
Confidence 9999999999999999999876533 2334455 67889999
Q ss_pred HHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhh
Q psy17412 166 ALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFE 238 (240)
Q Consensus 166 a~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 238 (240)
|.++...|++++|+..++++++.+|+++.++..+|.++...|++++|+.+|++++..+|+++.++..++.++.
T Consensus 224 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 296 (368)
T 1fch_A 224 GVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCI 296 (368)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988764
No 27
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.94 E-value=6.4e-26 Score=167.56 Aligned_cols=182 Identities=16% Similarity=0.152 Sum_probs=159.4
Q ss_pred HHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCccc----HHHHHHH
Q psy17412 45 IADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN----MKAHLYK 120 (240)
Q Consensus 45 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~----~~~~~~l 120 (240)
+++.++..|..++..|++++|+..|+++++.+|+++.++..+|.++...|++++|+..+++++. .|.+ ..++..+
T Consensus 2 n~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~l 80 (272)
T 3u4t_A 2 NDDVEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFS-KVNATKAKSADFEYY 80 (272)
T ss_dssp ---CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHH
Confidence 3456788999999999999999999999999999999999999999999999999999999998 4333 4458999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHH
Q psy17412 121 ARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKA 200 (240)
Q Consensus 121 a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la 200 (240)
|.++...|++++|+..++++++.+|.+... +..+|.++...|++++|+..++++++.+|.++.++..+|
T Consensus 81 g~~~~~~~~~~~A~~~~~~a~~~~~~~~~~-----------~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~ 149 (272)
T 3u4t_A 81 GKILMKKGQDSLAIQQYQAAVDRDTTRLDM-----------YGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELG 149 (272)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCTHH-----------HHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHH
T ss_pred HHHHHHcccHHHHHHHHHHHHhcCcccHHH-----------HHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHH
Confidence 999999999999999999999999988777 999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhh
Q psy17412 201 RAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFE 238 (240)
Q Consensus 201 ~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 238 (240)
......+++++|+..|+++++.+|++...+..++.++.
T Consensus 150 ~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~ 187 (272)
T 3u4t_A 150 QAYYYNKEYVKADSSFVKVLELKPNIYIGYLWRARANA 187 (272)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHH
Confidence 55555669999999999999999999888888877653
No 28
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.94 E-value=8.2e-26 Score=157.28 Aligned_cols=176 Identities=15% Similarity=0.115 Sum_probs=168.0
Q ss_pred hhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHH
Q psy17412 43 QDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKAR 122 (240)
Q Consensus 43 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 122 (240)
......+..+|..+...|++++|+..+++++...|.+..++..+|.++...|++++|+..++++++..|.++.++..+|.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 84 (186)
T 3as5_A 5 DIRQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGL 84 (186)
T ss_dssp CHHHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 34577889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHH
Q psy17412 123 AMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARA 202 (240)
Q Consensus 123 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~ 202 (240)
++...|++++|...++++++..|.+... +..+|.++...|++++|+..++++++..|.++.++..+|.+
T Consensus 85 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~-----------~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 153 (186)
T 3as5_A 85 TYVQVQKYDLAVPLLIKVAEANPINFNV-----------RFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFS 153 (186)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHhcCcHhHHH-----------HHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHH
Confidence 9999999999999999999999998777 99999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHH
Q psy17412 203 MHNLGQREEAKEYIRELVEKYPTRRKL 229 (240)
Q Consensus 203 ~~~~g~~~~A~~~~~~~~~~~p~~~~~ 229 (240)
+...|++++|..+++++++.+|+++..
T Consensus 154 ~~~~~~~~~A~~~~~~~~~~~~~~~~~ 180 (186)
T 3as5_A 154 YEQMGRHEEALPHFKKANELDEGASVE 180 (186)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHCCCGG
T ss_pred HHHcCCHHHHHHHHHHHHHcCCCchhh
Confidence 999999999999999999998887543
No 29
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.94 E-value=9.2e-27 Score=157.21 Aligned_cols=146 Identities=17% Similarity=0.101 Sum_probs=126.2
Q ss_pred hHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHH
Q psy17412 52 NGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQRE 131 (240)
Q Consensus 52 ~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 131 (240)
+|.++...|++++|+..+++++...|+++..++.+|.+|+..|++++|++.|+++++++|+++.++..+|.++..+|+++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~ 82 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTD 82 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchH
Confidence 67778888899999999999999888888888899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhH-HHHHhhcChhhHHHHHHHHHHHHHcCC
Q psy17412 132 EAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPD-CDKALRLDEDNMKAHLYKARAMHNLGQ 208 (240)
Q Consensus 132 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~-~~~~l~~~~~~~~~~~~la~~~~~~g~ 208 (240)
+|+..|+++++++|+++.. +.++|.++...|++++|... ++++++++|+++.++..++.++...|+
T Consensus 83 ~A~~~~~~al~~~p~~~~~-----------~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 83 KAVECYRRSVELNPTQKDL-----------VLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp HHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHhCCCCHHH-----------HHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhCc
Confidence 9999999999999988777 89999999999998887765 588999999999988888888887775
No 30
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.94 E-value=2.2e-24 Score=154.65 Aligned_cols=186 Identities=13% Similarity=0.100 Sum_probs=174.4
Q ss_pred hchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHH
Q psy17412 41 ARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYK 120 (240)
Q Consensus 41 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 120 (240)
..+..+..+..+|..+...|++++|+..|+++++.+|+++.++..+|.++...|++++|+..+++++...|.+..++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l 82 (225)
T 2vq2_A 3 KANQVSNIKTQLAMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNY 82 (225)
T ss_dssp -CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHc-CCHHHHHHHHHHHHH--cCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHH
Q psy17412 121 ARAMHSL-GQREEAKEYVRQLVE--KYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHL 197 (240)
Q Consensus 121 a~~~~~~-~~~~~A~~~~~~a~~--~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~ 197 (240)
|.++... |++++|+..++++++ ..|.+... +..+|.++...|++++|+..++++++..|+++.++.
T Consensus 83 ~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~-----------~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 151 (225)
T 2vq2_A 83 GWFLCGRLNRPAESMAYFDKALADPTYPTPYIA-----------NLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFK 151 (225)
T ss_dssp HHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHH-----------HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred HHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHH-----------HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHH
Confidence 9999999 999999999999999 55555555 999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC-CcHHHHHHHHHhh
Q psy17412 198 YKARAMHNLGQREEAKEYIRELVEKYP-TRRKLVENYTQAF 237 (240)
Q Consensus 198 ~la~~~~~~g~~~~A~~~~~~~~~~~p-~~~~~~~~l~~~~ 237 (240)
.+|.++...|++++|+.++++++...| .++..+..++.++
T Consensus 152 ~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (225)
T 2vq2_A 152 ELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIA 192 (225)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999 8888877666554
No 31
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.94 E-value=2e-24 Score=165.18 Aligned_cols=166 Identities=17% Similarity=0.132 Sum_probs=151.4
Q ss_pred HHHhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCc---ccH
Q psy17412 38 ERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDE---DNM 114 (240)
Q Consensus 38 ~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~---~~~ 114 (240)
.....|..+..++.+|.++...|++++|+..|+++++.+|++..++..+|.++...|++++|+..++++++..| ++.
T Consensus 29 ~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 108 (359)
T 3ieg_A 29 AVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEK 108 (359)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHH
T ss_pred HHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccChH
Confidence 34567888999999999999999999999999999999999999999999999999999999999999999999 888
Q ss_pred HHHHHH------------HHHHHHcCCHHHHHHHHHHHHHcCCCchHH-----------------------HHHhccCch
Q psy17412 115 KAHLYK------------ARAMHSLGQREEAKEYVRQLVEKYPTRRKL-----------------------AIEQVRDSP 159 (240)
Q Consensus 115 ~~~~~l------------a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~-----------------------~~~~~~~~~ 159 (240)
.++..+ |.++...|++++|+..++++++..|.++.. ++...|..+
T Consensus 109 ~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 188 (359)
T 3ieg_A 109 EAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKSDNT 188 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCH
Confidence 888777 789999999999999999999999988765 344567888
Q ss_pred HHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHH
Q psy17412 160 VLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAM 203 (240)
Q Consensus 160 ~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~ 203 (240)
..+..+|.++...|++++|+..++++++..|++..++..+..+.
T Consensus 189 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 232 (359)
T 3ieg_A 189 EAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVK 232 (359)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCccchHHHHHHHHHH
Confidence 99999999999999999999999999999999988777665554
No 32
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.94 E-value=1.3e-24 Score=177.26 Aligned_cols=193 Identities=11% Similarity=0.061 Sum_probs=132.1
Q ss_pred chhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHH
Q psy17412 42 RQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKA 121 (240)
Q Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la 121 (240)
.|.....|..+|..+...|++++|++.|++++...|++..++..+|.++...|++++|+..|+++++..|.++.++..+|
T Consensus 403 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~ 482 (597)
T 2xpi_A 403 DPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELG 482 (597)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 34444455555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCc-hHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHH
Q psy17412 122 RAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDS-PVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKA 200 (240)
Q Consensus 122 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~-~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la 200 (240)
.++...|++++|+..|+++++..|+. ...|.. ..++..+|.++...|++++|+..++++++.+|+++.++..+|
T Consensus 483 ~~~~~~g~~~~A~~~~~~~~~~~~~~-----~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~ 557 (597)
T 2xpi_A 483 VVAFNKSDMQTAINHFQNALLLVKKT-----QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIA 557 (597)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHS-----CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHhhhcc-----ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 55555555555555555555442110 001111 456999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhhc
Q psy17412 201 RAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFEQ 239 (240)
Q Consensus 201 ~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 239 (240)
.++...|++++|..+|+++++++|+++.++..++.+++.
T Consensus 558 ~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~ 596 (597)
T 2xpi_A 558 LVYLHKKIPGLAITHLHESLAISPNEIMASDLLKRALEE 596 (597)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHTTC-
T ss_pred HHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHhc
Confidence 999999999999999999999999999999999998864
No 33
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.94 E-value=7e-25 Score=161.97 Aligned_cols=181 Identities=15% Similarity=0.135 Sum_probs=156.5
Q ss_pred HHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHH
Q psy17412 46 ADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMH 125 (240)
Q Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 125 (240)
+.++..+|.++...|++++|+..|+++++.+|+++.++..+|.++...|++++|+..++++++.+|.++.++..+|...+
T Consensus 74 ~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 153 (272)
T 3u4t_A 74 SADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYY 153 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 55688888888888888888888888888888888888888888888888888888888888888888888888885555
Q ss_pred HcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcc---cCchhhHHHHHhhcC---hh-----hHH
Q psy17412 126 SLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQL---YDPVLPDCDKALRLD---ED-----NMK 194 (240)
Q Consensus 126 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~---~~~A~~~~~~~l~~~---~~-----~~~ 194 (240)
..+++++|+..++++++..|++... +..+|.++...|+ +++|+..++++++.. |+ ...
T Consensus 154 ~~~~~~~A~~~~~~a~~~~p~~~~~-----------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 222 (272)
T 3u4t_A 154 YNKEYVKADSSFVKVLELKPNIYIG-----------YLWRARANAAQDPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIE 222 (272)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHH-----------HHHHHHHHHHHSTTCSSCTTHHHHHHHHHHHGGGGGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCccchHH-----------HHHHHHHHHHcCcchhhHHHHHHHHHHHHHHhcccccchHHHHH
Confidence 5568888888888888888887766 9999999999999 999999999999875 44 246
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhh
Q psy17412 195 AHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAF 237 (240)
Q Consensus 195 ~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~ 237 (240)
++..+|.++...|++++|+.+|+++++++|+++.++..++.+.
T Consensus 223 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~ 265 (272)
T 3u4t_A 223 ANEYIAYYYTINRDKVKADAAWKNILALDPTNKKAIDGLKMKL 265 (272)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHC---
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCccHHHHHHHhhhhh
Confidence 8899999999999999999999999999999999999887764
No 34
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.94 E-value=5.8e-26 Score=187.77 Aligned_cols=181 Identities=14% Similarity=-0.009 Sum_probs=170.7
Q ss_pred chhHHHHHHHhHhHHHHhCCHHHHHHHHHHHH--------HhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCccc
Q psy17412 42 RQDIADHFKANGNKAFQSGQYEAALVQYDKAI--------EQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN 113 (240)
Q Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~--------~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 113 (240)
+|.++..++..| ...|++++|++.|++++ +.+|++..++..+|.++...|++++|+..|+++++.+|++
T Consensus 390 ~p~~~~a~~~~a---~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~ 466 (681)
T 2pzi_A 390 DPTDVAASVLQA---TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWR 466 (681)
T ss_dssp CTTSTTHHHHHH---TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCC
T ss_pred CCCCcchHHhhc---ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcch
Confidence 445555666555 78899999999999999 8899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhH
Q psy17412 114 MKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNM 193 (240)
Q Consensus 114 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~ 193 (240)
+.+++.+|.++..+|++++|+..|+++++++|++... +.++|.++...|++++ +..|+++++.+|++.
T Consensus 467 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~-----------~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~ 534 (681)
T 2pzi_A 467 WRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAP-----------KLALAATAELAGNTDE-HKFYQTVWSTNDGVI 534 (681)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHH-----------HHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHH-----------HHHHHHHHHHcCChHH-HHHHHHHHHhCCchH
Confidence 9999999999999999999999999999999999888 9999999999999999 999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhh
Q psy17412 194 KAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAF 237 (240)
Q Consensus 194 ~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~ 237 (240)
.+++++|.++..+|++++|+..|+++++++|++..++..++.++
T Consensus 535 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~ 578 (681)
T 2pzi_A 535 SAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTL 578 (681)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998876
No 35
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.94 E-value=4.2e-24 Score=168.61 Aligned_cols=182 Identities=19% Similarity=0.172 Sum_probs=136.8
Q ss_pred hchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccH---HHH
Q psy17412 41 ARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNM---KAH 117 (240)
Q Consensus 41 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~---~~~ 117 (240)
..|..+..+..+|.++...|++++|+..|+++++.+|++..++..+|.++...|++++|+..|++++...|++. .++
T Consensus 55 ~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~ 134 (450)
T 2y4t_A 55 GDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQ 134 (450)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred hCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHH
Confidence 34555666666666666666666666666666666666666666666666666666666666666666666555 444
Q ss_pred HHH------------HHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHH
Q psy17412 118 LYK------------ARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKA 185 (240)
Q Consensus 118 ~~l------------a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 185 (240)
..+ |.++...|++++|+..++++++..|.+... +..+|.++...|++++|+..++++
T Consensus 135 ~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~-----------~~~l~~~~~~~g~~~~A~~~~~~~ 203 (450)
T 2y4t_A 135 SQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAEL-----------RELRAECFIKEGEPRKAISDLKAA 203 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHTTCGGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHH-----------HHHHHHHHHHCCCHHHHHHHHHHH
Confidence 333 444666666666666666666666665555 999999999999999999999999
Q ss_pred hhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy17412 186 LRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENY 233 (240)
Q Consensus 186 l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l 233 (240)
++.+|+++.++..+|.++...|++++|+..|++++..+|++...+..+
T Consensus 204 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~ 251 (450)
T 2y4t_A 204 SKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHY 251 (450)
T ss_dssp HHHHCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHH
Confidence 999999999999999999999999999999999999999998877665
No 36
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.94 E-value=5.5e-25 Score=173.65 Aligned_cols=199 Identities=18% Similarity=0.223 Sum_probs=177.9
Q ss_pred HhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHH
Q psy17412 40 KARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLY 119 (240)
Q Consensus 40 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 119 (240)
..+|..+..++.+|..+...|++++|+..|++++..+|+++.++..+|.++...|++++|+..++++++.+|+++.++..
T Consensus 20 ~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 99 (450)
T 2y4t_A 20 FQSMADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQ 99 (450)
T ss_dssp ---CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 35677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCch---HHHHHhc-cCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHH
Q psy17412 120 KARAMHSLGQREEAKEYVRQLVEKYPTRR---KLAIEQV-RDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKA 195 (240)
Q Consensus 120 la~~~~~~~~~~~A~~~~~~a~~~~~~~~---~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~ 195 (240)
+|.++..+|++++|+..|+++++..|++. ....... ......+..+|.++...|++++|+..++++++..|.+..+
T Consensus 100 l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 179 (450)
T 2y4t_A 100 RGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAEL 179 (450)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHH
Confidence 99999999999999999999999999877 4400000 0011124555888999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhh
Q psy17412 196 HLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFE 238 (240)
Q Consensus 196 ~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 238 (240)
+..+|.++...|++++|+..|+++++.+|.++.++..++.++.
T Consensus 180 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 222 (450)
T 2y4t_A 180 RELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYY 222 (450)
T ss_dssp HHHHHHHHHHTTCGGGGHHHHHHHHHHHCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988764
No 37
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.94 E-value=1.4e-25 Score=185.24 Aligned_cols=153 Identities=19% Similarity=0.122 Sum_probs=147.9
Q ss_pred hcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHh
Q psy17412 75 QVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQ 154 (240)
Q Consensus 75 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 154 (240)
..|+++.++.++|.++..+|++++|+..|+++++++|+++.++.++|.++..+|++++|+..|+++++++|++...
T Consensus 4 s~P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a---- 79 (723)
T 4gyw_A 4 SCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADA---- 79 (723)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH----
T ss_pred CCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH----
Confidence 4688899999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred ccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q psy17412 155 VRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYT 234 (240)
Q Consensus 155 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~ 234 (240)
+.++|.++...|++++|++.|+++++++|++..++.++|.++..+|++++|+..|+++++++|+++.++.+++
T Consensus 80 -------~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~ 152 (723)
T 4gyw_A 80 -------YSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLA 152 (723)
T ss_dssp -------HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred -------HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhh
Q psy17412 235 QAFE 238 (240)
Q Consensus 235 ~~~~ 238 (240)
.++.
T Consensus 153 ~~l~ 156 (723)
T 4gyw_A 153 HCLQ 156 (723)
T ss_dssp HHHH
T ss_pred hHHH
Confidence 8875
No 38
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.94 E-value=9.4e-25 Score=165.12 Aligned_cols=189 Identities=11% Similarity=0.098 Sum_probs=156.8
Q ss_pred HHhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHH
Q psy17412 39 RKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHL 118 (240)
Q Consensus 39 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 118 (240)
....|..+..+..+|.++...|++++|+..++++++.+|++..++..+|.++...|++++|+..+++++...|.+...+.
T Consensus 48 ~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 127 (327)
T 3cv0_A 48 CQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQLGS 127 (327)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTTTC--
T ss_pred HHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHH
Confidence 34566777788888888888888888888888888888888888888888888888888888888888888777766665
Q ss_pred HH--------------HH-HHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHH
Q psy17412 119 YK--------------AR-AMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCD 183 (240)
Q Consensus 119 ~l--------------a~-~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 183 (240)
.+ +. ++...|++++|+..++++++..|.+... +..+|.++...|++++|+..++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~-----------~~~la~~~~~~~~~~~A~~~~~ 196 (327)
T 3cv0_A 128 VNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNPNDAQL-----------HASLGVLYNLSNNYDSAAANLR 196 (327)
T ss_dssp ------------------CCTTSHHHHHHHHHHHHHHHHHSTTCHHH-----------HHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhCCCCHHH-----------HHHHHHHHHHhccHHHHHHHHH
Confidence 55 55 5777788888888888888888776666 9999999999999999999999
Q ss_pred HHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhh
Q psy17412 184 KALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFE 238 (240)
Q Consensus 184 ~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 238 (240)
++++.+|+++.++..+|.++...|++++|+.+++++++..|+++.++..++.++.
T Consensus 197 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~ 251 (327)
T 3cv0_A 197 RAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYS 251 (327)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998888764
No 39
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.93 E-value=8.9e-25 Score=152.44 Aligned_cols=151 Identities=15% Similarity=0.180 Sum_probs=145.5
Q ss_pred CChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccC
Q psy17412 78 DSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRD 157 (240)
Q Consensus 78 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 157 (240)
+++.+|+++|.+|...|++++|+..|+++++++|+++.++..+|.++..+|++++|+..+++++...|++...
T Consensus 3 e~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~------- 75 (184)
T 3vtx_A 3 ETTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEA------- 75 (184)
T ss_dssp -CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHH-------
T ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHH-------
Confidence 4678999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred chHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhh
Q psy17412 158 SPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAF 237 (240)
Q Consensus 158 ~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~ 237 (240)
+..+|.++...++++.|...+.++++.+|++..++..+|.++..+|++++|+..|+++++.+|.++.++..++.++
T Consensus 76 ----~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~ 151 (184)
T 3vtx_A 76 ----YYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAY 151 (184)
T ss_dssp ----HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred hc
Q psy17412 238 EQ 239 (240)
Q Consensus 238 ~~ 239 (240)
.+
T Consensus 152 ~~ 153 (184)
T 3vtx_A 152 EG 153 (184)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 40
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.93 E-value=1.5e-24 Score=164.03 Aligned_cols=189 Identities=14% Similarity=0.079 Sum_probs=173.7
Q ss_pred HHhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHH--------------HH-HHHHccCcCchHHHH
Q psy17412 39 RKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNR--------------AL-TLLHLQLYDPVLPDC 103 (240)
Q Consensus 39 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l--------------a~-~~~~~~~~~~A~~~~ 103 (240)
....|.....+..+|.++...|++++|+..+++++...|.+...+..+ +. ++...|++++|+..+
T Consensus 82 ~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 161 (327)
T 3cv0_A 82 RMLDPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLL 161 (327)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHH
T ss_pred HhcCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHH
Confidence 445778899999999999999999999999999999999998888777 66 688999999999999
Q ss_pred HHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHH
Q psy17412 104 DKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCD 183 (240)
Q Consensus 104 ~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 183 (240)
++++...|.++.++..+|.++...|++++|+..++++++..|++... +..+|.++...|++++|+..++
T Consensus 162 ~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~-----------~~~l~~~~~~~~~~~~A~~~~~ 230 (327)
T 3cv0_A 162 HAALEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQL-----------WNKLGATLANGNRPQEALDAYN 230 (327)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHhhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHH-----------HHHHHHHHHHcCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998777 9999999999999999999999
Q ss_pred HHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------------cHHHHHHHHHhhh
Q psy17412 184 KALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPT------------RRKLVENYTQAFE 238 (240)
Q Consensus 184 ~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~------------~~~~~~~l~~~~~ 238 (240)
++++..|++..++..+|.++...|++++|+.++++++...|+ ++.++..++.++.
T Consensus 231 ~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 297 (327)
T 3cv0_A 231 RALDINPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLN 297 (327)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999 7888888888764
No 41
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.93 E-value=2.4e-26 Score=155.13 Aligned_cols=144 Identities=10% Similarity=0.043 Sum_probs=133.0
Q ss_pred HHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHH
Q psy17412 85 NRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTN 164 (240)
Q Consensus 85 ~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 164 (240)
.+|.++...|++++|+..+++++...|+++..++.+|.+|+.+|++++|+.+|+++++++|+++.. +..
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a-----------~~~ 70 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKA-----------HRF 70 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----------HHH
T ss_pred HhHHHHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH-----------HHH
Confidence 478899999999999999999999999999999999999999999999999999999999999888 999
Q ss_pred HHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHH-HHHHHHhCCCcHHHHHHHHHhhhc
Q psy17412 165 RALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEY-IRELVEKYPTRRKLVENYTQAFEQ 239 (240)
Q Consensus 165 la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~-~~~~~~~~p~~~~~~~~l~~~~~~ 239 (240)
+|.++...|++++|+..|+++++++|+++.++..+|.++...|++++|... ++++++++|+++.++...++++..
T Consensus 71 lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~~ 146 (150)
T 4ga2_A 71 LGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLDC 146 (150)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999887765 599999999999999999888764
No 42
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.93 E-value=1.4e-23 Score=171.27 Aligned_cols=189 Identities=13% Similarity=0.063 Sum_probs=168.3
Q ss_pred HhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHH
Q psy17412 40 KARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLY 119 (240)
Q Consensus 40 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 119 (240)
...|.....+..+|..+...|++++|++.|+++++..|.+..+|..+|.++...|++++|++.|++++...|++..++..
T Consensus 367 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~ 446 (597)
T 2xpi_A 367 DRHPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLF 446 (597)
T ss_dssp HHCTTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHH
T ss_pred hhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHH
Confidence 34566778888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhc------Chhh-
Q psy17412 120 KARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRL------DEDN- 192 (240)
Q Consensus 120 la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~------~~~~- 192 (240)
+|.++...|++++|+..|+++++..|.++.. +..+|.++.+.|++++|+..|+++++. +|+.
T Consensus 447 l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~-----------~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~ 515 (597)
T 2xpi_A 447 LGMQHMQLGNILLANEYLQSSYALFQYDPLL-----------LNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPW 515 (597)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCCCCHHH-----------HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGG
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCChHH-----------HHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhH
Confidence 8888888888888888888888888887766 999999999999999999999999988 5654
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhhc
Q psy17412 193 MKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFEQ 239 (240)
Q Consensus 193 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 239 (240)
..++..+|.++...|++++|+..++++++.+|+++.++..++.++.+
T Consensus 516 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 562 (597)
T 2xpi_A 516 AATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLH 562 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999988753
No 43
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.93 E-value=2.3e-24 Score=155.17 Aligned_cols=184 Identities=13% Similarity=0.077 Sum_probs=159.7
Q ss_pred HHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCCh---HHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHH---HHH
Q psy17412 45 IADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSP---VLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMK---AHL 118 (240)
Q Consensus 45 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~---~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~---~~~ 118 (240)
.+..++.+|..++..|+|++|+..|++++...|+++ .+++.+|.++...|++++|+..|+++++.+|+++. +++
T Consensus 3 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~ 82 (225)
T 2yhc_A 3 PPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMY 82 (225)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHH
Confidence 456789999999999999999999999999999874 68999999999999999999999999999998754 789
Q ss_pred HHHHHHHH------------------cCCHHHHHHHHHHHHHcCCCchHHHH------HhccCchHHHHHHHHHHHHhcc
Q psy17412 119 YKARAMHS------------------LGQREEAKEYVRQLVEKYPTRRKLAI------EQVRDSPVLYTNRALTLLHLQL 174 (240)
Q Consensus 119 ~la~~~~~------------------~~~~~~A~~~~~~a~~~~~~~~~~~~------~~~~~~~~~~~~la~~~~~~~~ 174 (240)
.+|.++.. .|++++|+..|+++++..|+++.... ............+|.++...|+
T Consensus 83 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~ 162 (225)
T 2yhc_A 83 MRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGA 162 (225)
T ss_dssp HHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 99999876 57999999999999999999875510 0001112234678999999999
Q ss_pred cCchhhHHHHHhhcChhhH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH
Q psy17412 175 YDPVLPDCDKALRLDEDNM---KAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRK 228 (240)
Q Consensus 175 ~~~A~~~~~~~l~~~~~~~---~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~ 228 (240)
+++|+..|+++++..|+++ .++..+|.++..+|++++|+..++++....|++.+
T Consensus 163 ~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~~~~~~~~ 219 (225)
T 2yhc_A 163 WVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAANSSNTLE 219 (225)
T ss_dssp HHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCCSCCCC
T ss_pred HHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCCchh
Confidence 9999999999999998865 78999999999999999999999999998887643
No 44
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.93 E-value=5.7e-24 Score=158.81 Aligned_cols=175 Identities=17% Similarity=0.138 Sum_probs=112.3
Q ss_pred hhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHH-
Q psy17412 43 QDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKA- 121 (240)
Q Consensus 43 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la- 121 (240)
|+++..++.+|.++...|++++|++.+++ |++..++..+|.++...|++++|+..++++++.+|++.......+
T Consensus 98 P~~~~~~~~la~~~~~~g~~~~Al~~l~~-----~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~ 172 (291)
T 3mkr_A 98 VTNTTFLLMAASIYFYDQNPDAALRTLHQ-----GDSLECMAMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAW 172 (291)
T ss_dssp CSCHHHHHHHHHHHHHTTCHHHHHHHHTT-----CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHhC-----CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHH
Confidence 44445555555555555555555555544 444555555555555555555555555555555554432222222
Q ss_pred -HHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHH
Q psy17412 122 -RAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKA 200 (240)
Q Consensus 122 -~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la 200 (240)
.++...|++++|+..|+++++..|+++ .+++++|.++...|++++|+..++++++.+|+++.++.++|
T Consensus 173 ~~l~~~~~~~~eA~~~~~~~l~~~p~~~-----------~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~ 241 (291)
T 3mkr_A 173 VSLAAGGEKLQDAYYIFQEMADKCSPTL-----------LLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLV 241 (291)
T ss_dssp HHHHHCTTHHHHHHHHHHHHHHHSCCCH-----------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHhCchHHHHHHHHHHHHHHhCCCcH-----------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 112223455555555555555555444 44899999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHH-HHHHHHHHHHhCCCcHHHHHHH
Q psy17412 201 RAMHNLGQREE-AKEYIRELVEKYPTRRKLVENY 233 (240)
Q Consensus 201 ~~~~~~g~~~~-A~~~~~~~~~~~p~~~~~~~~l 233 (240)
.++..+|+.++ +..+++++++.+|+++.+....
T Consensus 242 ~~~~~~g~~~eaa~~~~~~~~~~~P~~~~~~d~~ 275 (291)
T 3mkr_A 242 VLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYR 275 (291)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 99999999876 5678889999999988766543
No 45
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.92 E-value=3.9e-23 Score=152.68 Aligned_cols=187 Identities=15% Similarity=0.100 Sum_probs=161.7
Q ss_pred chhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHH
Q psy17412 42 RQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKA 121 (240)
Q Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la 121 (240)
.+..+..++.+|.++...|++++|+..|++++..+|+++.++..+|.++...|++++|+..++++++.+|.++.++..+|
T Consensus 39 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la 118 (275)
T 1xnf_A 39 DDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRG 118 (275)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCchHH----------------------HHHhccCchHHHHHHHHHHHHhcccCchh
Q psy17412 122 RAMHSLGQREEAKEYVRQLVEKYPTRRKL----------------------AIEQVRDSPVLYTNRALTLLHLQLYDPVL 179 (240)
Q Consensus 122 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~----------------------~~~~~~~~~~~~~~la~~~~~~~~~~~A~ 179 (240)
.++...|++++|+..++++++..|++... .+...+..... ..++.++...++.++|+
T Consensus 119 ~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~ 197 (275)
T 1xnf_A 119 IALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWG-WNIVEFYLGNISEQTLM 197 (275)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHSCCCSTH-HHHHHHHTTSSCHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcchHH-HHHHHHHHHhcCHHHHH
Confidence 99999999999999999999999998743 12222333333 33555666666677778
Q ss_pred hHHHHHhhcChhh----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHH
Q psy17412 180 PDCDKALRLDEDN----MKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKL 229 (240)
Q Consensus 180 ~~~~~~l~~~~~~----~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~ 229 (240)
..+.++++..|.. +.++..+|.++...|++++|+.+|++++..+|++...
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 251 (275)
T 1xnf_A 198 ERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVE 251 (275)
T ss_dssp HHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTCHH
T ss_pred HHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCchhHHH
Confidence 8888887776643 7889999999999999999999999999999977553
No 46
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.92 E-value=1.8e-23 Score=156.09 Aligned_cols=181 Identities=9% Similarity=0.019 Sum_probs=163.3
Q ss_pred chhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHh--cCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHH
Q psy17412 42 RQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQ--VRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLY 119 (240)
Q Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~--~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 119 (240)
.+....++..++..+...+++++|++.+++.+.. +|+++.+++.+|.++...|++++|+..+++ |.++.++..
T Consensus 61 ~~~~~~a~~~la~~~~~~~~~~~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~-----~~~~~~~~~ 135 (291)
T 3mkr_A 61 SAPELQAVRMFAEYLASHSRRDAIVAELDREMSRSVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ-----GDSLECMAM 135 (291)
T ss_dssp SCHHHHHHHHHHHHHHCSTTHHHHHHHHHHHHHSCCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT-----CCSHHHHHH
T ss_pred CChhHHHHHHHHHHHcCCCcHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC-----CCCHHHHHH
Confidence 5567788889999999999999999999999876 699999999999999999999999999988 889999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHH--HHHHHhcccCchhhHHHHHhhcChhhHHHHH
Q psy17412 120 KARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRA--LTLLHLQLYDPVLPDCDKALRLDEDNMKAHL 197 (240)
Q Consensus 120 la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la--~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~ 197 (240)
+|.++..+|++++|+..++++++.+|++... ....+ .++...|++++|+..|+++++.+|+++.++.
T Consensus 136 l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~-----------~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~ 204 (291)
T 3mkr_A 136 TVQILLKLDRLDLARKELKKMQDQDEDATLT-----------QLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLN 204 (291)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhhCcCcHHH-----------HHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHH
Confidence 9999999999999999999999999986533 22222 3334558999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhh
Q psy17412 198 YKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFE 238 (240)
Q Consensus 198 ~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 238 (240)
.+|.++..+|++++|...|++++..+|++++++.+++.++.
T Consensus 205 ~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~ 245 (291)
T 3mkr_A 205 GQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQ 245 (291)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987654
No 47
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.92 E-value=4.8e-24 Score=139.45 Aligned_cols=123 Identities=20% Similarity=0.316 Sum_probs=114.3
Q ss_pred HHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHH
Q psy17412 105 KALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDK 184 (240)
Q Consensus 105 ~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 184 (240)
++..++|+.+..+..+|..++..|+|++|+..|+++++++|.++.. +.++|.++..+|++++|+..+++
T Consensus 4 r~a~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~-----------~~~~~~~~~~~~~~~~A~~~~~~ 72 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAIL-----------YSNRAACLTKLMEFQRALDDCDT 72 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH-----------HHHHhhHHHhhccHHHHHHHHHH
Confidence 3456789999999999999999999999999999999999998888 99999999999999999999999
Q ss_pred HhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhh
Q psy17412 185 ALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFE 238 (240)
Q Consensus 185 ~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 238 (240)
+++++|+++.+++.+|.++..+|++++|+..|+++++++|++++++..+++++.
T Consensus 73 al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~lr 126 (126)
T 4gco_A 73 CIRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCLR 126 (126)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHCC
T ss_pred HHHhhhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999998863
No 48
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.92 E-value=3e-23 Score=166.15 Aligned_cols=194 Identities=19% Similarity=0.122 Sum_probs=150.3
Q ss_pred hhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHH
Q psy17412 43 QDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKAR 122 (240)
Q Consensus 43 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 122 (240)
+..+..+..+|.++...|++++|+..|++++..+|+ ..++..+|.++...|++++|+..+++++...|.++.++..+|.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 312 (514)
T 2gw1_A 234 EKLAISLEHTGIFKFLKNDPLGAHEDIKKAIELFPR-VNSYIYMALIMADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQ 312 (514)
T ss_dssp HHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHTSSCCTTGGGHHHHHHTTCTTCTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcc-HHHHHHHHHHHHHCCCHHHHHHHHHHHhhcCcCCHHHHHHHHH
Confidence 777889999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHcCCCchHH-----------------------HHHhccCchHHHHHHHHHHHHhcccCchh
Q psy17412 123 AMHSLGQREEAKEYVRQLVEKYPTRRKL-----------------------AIEQVRDSPVLYTNRALTLLHLQLYDPVL 179 (240)
Q Consensus 123 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~-----------------------~~~~~~~~~~~~~~la~~~~~~~~~~~A~ 179 (240)
++...|++++|+..++++++..|.+... ++...|..+.++..+|.++...|++++|+
T Consensus 313 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~ 392 (514)
T 2gw1_A 313 MNFILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDKAL 392 (514)
T ss_dssp HHHHTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCCHHHHH
Confidence 9999999999999999999998887654 23334455556666666666666666666
Q ss_pred hHHHHHhhcChhhHH------HHHHHHHHHHH---cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhh
Q psy17412 180 PDCDKALRLDEDNMK------AHLYKARAMHN---LGQREEAKEYIRELVEKYPTRRKLVENYTQAF 237 (240)
Q Consensus 180 ~~~~~~l~~~~~~~~------~~~~la~~~~~---~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~ 237 (240)
..++++++..|++.. ++..+|.++.. .|++++|+..+++++..+|+++.++..++.++
T Consensus 393 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~ 459 (514)
T 2gw1_A 393 KQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQMK 459 (514)
T ss_dssp HHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 666666666555533 56666666666 66666666666666666666666666555554
No 49
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.92 E-value=5.7e-24 Score=169.10 Aligned_cols=169 Identities=16% Similarity=0.138 Sum_probs=161.3
Q ss_pred HHHhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc---------cCcCchHHHHHHHHh
Q psy17412 38 ERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHL---------QLYDPVLPDCDKALR 108 (240)
Q Consensus 38 ~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~---------~~~~~A~~~~~~~~~ 108 (240)
.....|..+.++..+|.++...|++++|+..|+++++.+|+ ..++..+|.++... |++++|+..++++++
T Consensus 129 al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 207 (474)
T 4abn_A 129 AVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQ 207 (474)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHH
Confidence 45668889999999999999999999999999999999999 79999999999999 999999999999999
Q ss_pred cCcccHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHHcCC---CchHHHHHhccCchHHHHHHHHHHHHhcccCc
Q psy17412 109 LDEDNMKAHLYKARAMHSL--------GQREEAKEYVRQLVEKYP---TRRKLAIEQVRDSPVLYTNRALTLLHLQLYDP 177 (240)
Q Consensus 109 ~~~~~~~~~~~la~~~~~~--------~~~~~A~~~~~~a~~~~~---~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~ 177 (240)
++|+++.++..+|.++..+ |++++|+..|+++++++| .++.. +.++|.++...|++++
T Consensus 208 ~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~-----------~~~lg~~~~~~g~~~~ 276 (474)
T 4abn_A 208 MDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDL-----------HLNRATLHKYEESYGE 276 (474)
T ss_dssp HCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHH-----------HHHHHHHHHHTTCHHH
T ss_pred hCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHH-----------HHHHHHHHHHcCCHHH
Confidence 9999999999999999999 999999999999999999 77776 9999999999999999
Q ss_pred hhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy17412 178 VLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRE 218 (240)
Q Consensus 178 A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 218 (240)
|+..|+++++.+|++..++..++.++..+|++++|+..+.+
T Consensus 277 A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~~eAi~~~~~ 317 (474)
T 4abn_A 277 ALEGFSQAAALDPAWPEPQQREQQLLEFLSRLTSLLESKGK 317 (474)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999986654
No 50
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.91 E-value=2e-23 Score=168.09 Aligned_cols=191 Identities=17% Similarity=0.154 Sum_probs=136.3
Q ss_pred hchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHH
Q psy17412 41 ARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYK 120 (240)
Q Consensus 41 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 120 (240)
..|. ...+..+|.++...|++++|+..|++++..+|+++.++..+|.++...|++++|+..+++++...|.++.++..+
T Consensus 272 ~~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l 350 (537)
T 3fp2_A 272 LHPT-PNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQL 350 (537)
T ss_dssp HCCC-HHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHH
T ss_pred cCCC-chHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3444 677777777777777788888888877777777777777778777777888888888888777777777777777
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCchHH-----------------------HHHhccCc------hHHHHHHHHHHHH
Q psy17412 121 ARAMHSLGQREEAKEYVRQLVEKYPTRRKL-----------------------AIEQVRDS------PVLYTNRALTLLH 171 (240)
Q Consensus 121 a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~-----------------------~~~~~~~~------~~~~~~la~~~~~ 171 (240)
|.++...|++++|+..++++++..|+++.. ++...|.. ...+..+|.++..
T Consensus 351 a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~ 430 (537)
T 3fp2_A 351 ACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATILAR 430 (537)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHH
Confidence 777777788888888887777777776654 11111111 1224555667777
Q ss_pred h----------cccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHH
Q psy17412 172 L----------QLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVEN 232 (240)
Q Consensus 172 ~----------~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~ 232 (240)
. |++++|+..++++++.+|++..++..+|.++..+|++++|+.+|+++++++|+.+.....
T Consensus 431 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 501 (537)
T 3fp2_A 431 QSSQDPTQLDEEKFNAAIKLLTKACELDPRSEQAKIGLAQLKLQMEKIDEAIELFEDSAILARTMDEKLQA 501 (537)
T ss_dssp HHTC----CCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CHHHHHH
T ss_pred HhhccchhhhHhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHH
Confidence 6 777777777777777777777777777777777777777777777777777777665443
No 51
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.91 E-value=4.6e-23 Score=165.01 Aligned_cols=195 Identities=18% Similarity=0.141 Sum_probs=167.5
Q ss_pred HhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHH
Q psy17412 40 KARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLY 119 (240)
Q Consensus 40 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 119 (240)
...|. ...+..+|.++...|++++|+..+++++..+|.+..++..+|.++...|++++|+..+++++...|.++.++..
T Consensus 265 ~~~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 343 (514)
T 2gw1_A 265 ELFPR-VNSYIYMALIMADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDFDKAKELDPENIFPYIQ 343 (514)
T ss_dssp HHCCC-HHHHHHHHHHHHTSSCCTTGGGHHHHHHTTCTTCTHHHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCSHHHHH
T ss_pred hhCcc-HHHHHHHHHHHHHCCCHHHHHHHHHHHhhcCcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhChhhHHHHHH
Confidence 34555 88888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCchHH-----------------------HHHhccCchH------HHHHHHHHHH
Q psy17412 120 KARAMHSLGQREEAKEYVRQLVEKYPTRRKL-----------------------AIEQVRDSPV------LYTNRALTLL 170 (240)
Q Consensus 120 la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~-----------------------~~~~~~~~~~------~~~~la~~~~ 170 (240)
+|.++...|++++|+..++++++..|+++.. ++...|..+. .+..+|.++.
T Consensus 344 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~ 423 (514)
T 2gw1_A 344 LACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLT 423 (514)
T ss_dssp HHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHh
Confidence 8888888888888888888888888876654 2333344433 8999999999
Q ss_pred H---hcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q psy17412 171 H---LQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQ 235 (240)
Q Consensus 171 ~---~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~ 235 (240)
. .|++++|+..++++++.+|+++.++..+|.++...|++++|+.+|+++++.+|+++.++..+..
T Consensus 424 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 491 (514)
T 2gw1_A 424 RNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITF 491 (514)
T ss_dssp TSCCTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHHHHHHH
T ss_pred hhhhcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 9 9999999999999999999999999999999999999999999999999999999988776543
No 52
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.91 E-value=2.2e-23 Score=150.25 Aligned_cols=151 Identities=12% Similarity=0.159 Sum_probs=143.2
Q ss_pred CCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCc-ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhc
Q psy17412 77 RDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDE-DNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQV 155 (240)
Q Consensus 77 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 155 (240)
+.++..++.+|.+++..|++++|+..|+++++.+| .+..+++.+|.++..+|++++|+..++++++.+|++...
T Consensus 4 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~----- 78 (228)
T 4i17_A 4 TTDPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANA----- 78 (228)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHH-----
T ss_pred ccCHHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHH-----
Confidence 45678999999999999999999999999999998 888999999999999999999999999999999998887
Q ss_pred cCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhH-------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--c
Q psy17412 156 RDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNM-------KAHLYKARAMHNLGQREEAKEYIRELVEKYPT--R 226 (240)
Q Consensus 156 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~-------~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~--~ 226 (240)
+..+|.++...|++++|+..++++++.+|+++ .++..+|.++..+|++++|+..|+++++.+|+ +
T Consensus 79 ------~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~ 152 (228)
T 4i17_A 79 ------YIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWK 152 (228)
T ss_dssp ------HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHH
T ss_pred ------HHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCccc
Confidence 99999999999999999999999999999988 66999999999999999999999999999999 8
Q ss_pred HHHHHHHHHhhh
Q psy17412 227 RKLVENYTQAFE 238 (240)
Q Consensus 227 ~~~~~~l~~~~~ 238 (240)
+.++..++.++.
T Consensus 153 ~~~~~~l~~~~~ 164 (228)
T 4i17_A 153 TDALYSLGVLFY 164 (228)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 899999888763
No 53
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.91 E-value=1.2e-22 Score=152.92 Aligned_cols=188 Identities=13% Similarity=0.096 Sum_probs=143.1
Q ss_pred HHHhchhHHHHHHHhHhHHHH-------hCCH-------HHHHHHHHHHHH-hcCCChHHHHHHHHHHHHccCcCchHHH
Q psy17412 38 ERKARQDIADHFKANGNKAFQ-------SGQY-------EAALVQYDKAIE-QVRDSPVLYTNRALTLLHLQLYDPVLPD 102 (240)
Q Consensus 38 ~~~~~~~~~~~~~~~a~~~~~-------~~~~-------~~A~~~~~~a~~-~~~~~~~~~~~la~~~~~~~~~~~A~~~ 102 (240)
.....|..+..|+..|..+.. .|++ ++|+..|++++. ..|++..+|..+|.++...|++++|...
T Consensus 42 al~~~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~ 121 (308)
T 2ond_A 42 CLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSI 121 (308)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHH
Confidence 344577888899998888764 4775 899999999998 6899988999999999999999999999
Q ss_pred HHHHHhcCcccHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHH-hcccCchhh
Q psy17412 103 CDKALRLDEDNMK-AHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLH-LQLYDPVLP 180 (240)
Q Consensus 103 ~~~~~~~~~~~~~-~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~ 180 (240)
|+++++..|.++. +|..+|.++...|++++|+..|+++++..|.+... +...+.+... .|++++|+.
T Consensus 122 ~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~-----------~~~~a~~~~~~~~~~~~A~~ 190 (308)
T 2ond_A 122 YNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHV-----------YVTAALMEYYCSKDKSVAFK 190 (308)
T ss_dssp HHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHH-----------HHHHHHHHHHTSCCHHHHHH
T ss_pred HHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHH-----------HHHHHHHHHHHcCCHHHHHH
Confidence 9999999888876 89999999999999999999999999888876554 5444444332 466777777
Q ss_pred HHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCC-cHHHHHHHHHh
Q psy17412 181 DCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEK---YPT-RRKLVENYTQA 236 (240)
Q Consensus 181 ~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~---~p~-~~~~~~~l~~~ 236 (240)
.|+++++.+|+++.+|..++.++..+|++++|...|++++.. .|+ ...+|..++.+
T Consensus 191 ~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~ 250 (308)
T 2ond_A 191 IFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAF 250 (308)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHH
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHH
Confidence 777777777777777777777777777777777777777764 332 45555555443
No 54
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.91 E-value=7.9e-23 Score=164.65 Aligned_cols=159 Identities=13% Similarity=0.026 Sum_probs=143.1
Q ss_pred HHhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHH
Q psy17412 39 RKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHL 118 (240)
Q Consensus 39 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 118 (240)
....|..+..+..+|.++...|++++|+..|++++..+|+++.++..+|.++...|++++|+..++++++..|+++.++.
T Consensus 303 ~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~ 382 (537)
T 3fp2_A 303 VDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPT 382 (537)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHH
T ss_pred hccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHH
Confidence 44567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCCchHH---------------------------------------HHHhccCch
Q psy17412 119 YKARAMHSLGQREEAKEYVRQLVEKYPTRRKL---------------------------------------AIEQVRDSP 159 (240)
Q Consensus 119 ~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~---------------------------------------~~~~~~~~~ 159 (240)
.+|.++...|++++|+..++++++..|++... ++...|..+
T Consensus 383 ~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~ 462 (537)
T 3fp2_A 383 FFAEILTDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTKACELDPRSE 462 (537)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999987654211 244467788
Q ss_pred HHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHH
Q psy17412 160 VLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHL 197 (240)
Q Consensus 160 ~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~ 197 (240)
.++..+|.++...|++++|+..|+++++..|+......
T Consensus 463 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 500 (537)
T 3fp2_A 463 QAKIGLAQLKLQMEKIDEAIELFEDSAILARTMDEKLQ 500 (537)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHH
Confidence 99999999999999999999999999999999877654
No 55
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.91 E-value=2.6e-22 Score=159.35 Aligned_cols=194 Identities=21% Similarity=0.093 Sum_probs=159.6
Q ss_pred hHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHh---------cCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcC----
Q psy17412 44 DIADHFKANGNKAFQSGQYEAALVQYDKAIEQ---------VRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLD---- 110 (240)
Q Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~---------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~---- 110 (240)
..+..+..+|.++...|++++|++.|++++++ +|.....+.++|.+|..+|++++|+.++++++.+.
T Consensus 49 ~~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~ 128 (472)
T 4g1t_A 49 FKATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFS 128 (472)
T ss_dssp -CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcc
Confidence 34567778999999999999999999999886 34556778899999999999999999999988763
Q ss_pred ----cccHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHcCCCchHH--------------------------HHHhccCc
Q psy17412 111 ----EDNMKAHLYKARAMHSL--GQREEAKEYVRQLVEKYPTRRKL--------------------------AIEQVRDS 158 (240)
Q Consensus 111 ----~~~~~~~~~la~~~~~~--~~~~~A~~~~~~a~~~~~~~~~~--------------------------~~~~~~~~ 158 (240)
+..+.++..+|.++... +++++|+.+|+++++++|+++.. ++...|..
T Consensus 129 ~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~ 208 (472)
T 4g1t_A 129 SPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDN 208 (472)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSC
T ss_pred cccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcc
Confidence 34567788888777665 47899999999999999988765 34445667
Q ss_pred hHHHHHHHHHHHH----hcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q psy17412 159 PVLYTNRALTLLH----LQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYT 234 (240)
Q Consensus 159 ~~~~~~la~~~~~----~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~ 234 (240)
+.++..+|..+.. .+++++|+..+++++..+|.+..++..+|.++...|++++|+..++++++.+|+++.++..++
T Consensus 209 ~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg 288 (472)
T 4g1t_A 209 QYLKVLLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIG 288 (472)
T ss_dssp HHHHHHHHHHHHHCC------CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHH
Confidence 7778888776654 467889999999999999999999999999999999999999999999999999999999888
Q ss_pred Hhh
Q psy17412 235 QAF 237 (240)
Q Consensus 235 ~~~ 237 (240)
.++
T Consensus 289 ~~y 291 (472)
T 4g1t_A 289 CCY 291 (472)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 56
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.91 E-value=3.6e-23 Score=135.30 Aligned_cols=119 Identities=25% Similarity=0.445 Sum_probs=113.6
Q ss_pred HhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHH
Q psy17412 40 KARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLY 119 (240)
Q Consensus 40 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 119 (240)
..+|+.++.+..+|..++..|+|++|++.|+++++.+|.++.++.++|.++..+|++++|+..++++++++|+++.+++.
T Consensus 7 ~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 86 (126)
T 4gco_A 7 YINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIR 86 (126)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHH
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHH
Q psy17412 120 KARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTL 169 (240)
Q Consensus 120 la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 169 (240)
+|.++..+|++++|+..|+++++++|++... +..++.++
T Consensus 87 lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a-----------~~~l~~~l 125 (126)
T 4gco_A 87 KAACLVAMREWSKAQRAYEDALQVDPSNEEA-----------REGVRNCL 125 (126)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCcCCHHH-----------HHHHHHhc
Confidence 9999999999999999999999999999887 87777653
No 57
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.91 E-value=5.9e-24 Score=147.32 Aligned_cols=166 Identities=11% Similarity=0.025 Sum_probs=148.5
Q ss_pred hHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHH
Q psy17412 44 DIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARA 123 (240)
Q Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 123 (240)
...+.++.+|..+...|++++|+..|+++++.+|+++.++..+|.++...|++++|+..+++++...| ++..+..++.+
T Consensus 4 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~ 82 (176)
T 2r5s_A 4 SPDEQLLKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIAKL 82 (176)
T ss_dssp --CTTHHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHHH
Confidence 34456788999999999999999999999999999999999999999999999999999999999999 77766666655
Q ss_pred HH-HcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhh--HHHHHHHH
Q psy17412 124 MH-SLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN--MKAHLYKA 200 (240)
Q Consensus 124 ~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~--~~~~~~la 200 (240)
.. ..+...+|+..++++++.+|+++.. ++.+|.++...|++++|+..|+++++.+|+. ..++..+|
T Consensus 83 ~~~~~~~~~~a~~~~~~al~~~P~~~~~-----------~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~ 151 (176)
T 2r5s_A 83 ELHQQAAESPELKRLEQELAANPDNFEL-----------ACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFM 151 (176)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHSTTCHHH-----------HHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHH
T ss_pred HHHhhcccchHHHHHHHHHHhCCCCHHH-----------HHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHH
Confidence 33 3344556899999999999999888 9999999999999999999999999999975 66999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHH
Q psy17412 201 RAMHNLGQREEAKEYIRELVE 221 (240)
Q Consensus 201 ~~~~~~g~~~~A~~~~~~~~~ 221 (240)
.++..+|+.++|+..|++++.
T Consensus 152 ~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 152 DILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHhCCCCcHHHHHHHHHH
Confidence 999999999999999999875
No 58
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.91 E-value=2.4e-23 Score=172.15 Aligned_cols=157 Identities=13% Similarity=-0.012 Sum_probs=148.7
Q ss_pred HhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHH
Q psy17412 40 KARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLY 119 (240)
Q Consensus 40 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 119 (240)
...|.....++.+|.++...|++++|+..|+++++.+|++..+++.+|.++...|++++|+..|+++++++|+++.++++
T Consensus 427 ~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~ 506 (681)
T 2pzi_A 427 VDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLA 506 (681)
T ss_dssp -CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHH
T ss_pred cccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHH
Confidence 45688899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHH
Q psy17412 120 KARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYK 199 (240)
Q Consensus 120 la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~l 199 (240)
+|.++..+|++++ +..|+++++++|++... ++++|.++...|++++|+..|+++++++|++..++.++
T Consensus 507 lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a-----------~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~ 574 (681)
T 2pzi_A 507 LAATAELAGNTDE-HKFYQTVWSTNDGVISA-----------AFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTS 574 (681)
T ss_dssp HHHHHHHHTCCCT-TCHHHHHHHHCTTCHHH-----------HHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHH
T ss_pred HHHHHHHcCChHH-HHHHHHHHHhCCchHHH-----------HHHHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHH
Confidence 9999999999999 99999999999999888 99999999999999999999999999999999999999
Q ss_pred HHHHHHcCC
Q psy17412 200 ARAMHNLGQ 208 (240)
Q Consensus 200 a~~~~~~g~ 208 (240)
|.++...|+
T Consensus 575 ~~~~~~~~~ 583 (681)
T 2pzi_A 575 AVTLLSGRS 583 (681)
T ss_dssp HHHTC----
T ss_pred HHHHHccCC
Confidence 999988666
No 59
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.90 E-value=4.2e-23 Score=167.79 Aligned_cols=163 Identities=12% Similarity=-0.004 Sum_probs=136.9
Q ss_pred hCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHH
Q psy17412 59 SGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVR 138 (240)
Q Consensus 59 ~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 138 (240)
.|++++|+..|+++++.+|++..++..+|.++...|++++|+..++++++.+|++..++..+|.++..+|++++|+..++
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 81 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQ 81 (568)
T ss_dssp -------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHc---CCHHHHHHH
Q psy17412 139 QLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNL---GQREEAKEY 215 (240)
Q Consensus 139 ~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~---g~~~~A~~~ 215 (240)
++++.+|++... +.++|.++...|++++|+..++++++.+|++..++..+|.++..+ |++++|...
T Consensus 82 ~al~~~p~~~~~-----------~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~ 150 (568)
T 2vsy_A 82 QASDAAPEHPGI-----------ALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQ 150 (568)
T ss_dssp HHHHHCTTCHHH-----------HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHH
T ss_pred HHHhcCCCCHHH-----------HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHH
Confidence 999999998877 999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHhCCCcHHHHHH
Q psy17412 216 IRELVEKYPTRRKLVEN 232 (240)
Q Consensus 216 ~~~~~~~~p~~~~~~~~ 232 (240)
++++++.+|.+...+..
T Consensus 151 ~~~al~~~p~~~~~~~~ 167 (568)
T 2vsy_A 151 VRAAVAQGVGAVEPFAF 167 (568)
T ss_dssp HHHHHHHTCCCSCHHHH
T ss_pred HHHHHhcCCcccChHHH
Confidence 99999999987555443
No 60
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.90 E-value=8.3e-23 Score=152.30 Aligned_cols=169 Identities=16% Similarity=0.077 Sum_probs=161.1
Q ss_pred chhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHH
Q psy17412 42 RQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKA 121 (240)
Q Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la 121 (240)
.|.....++.+|..+...|++++|+..|+++++.+|+++.++..+|.++...|++++|+..+++++..+|+........+
T Consensus 113 lp~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~ 192 (287)
T 3qou_A 113 LPREEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQ 192 (287)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHH
T ss_pred cCCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHH
Confidence 37788899999999999999999999999999999999999999999999999999999999999999998877778888
Q ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhh--HHHHHHH
Q psy17412 122 RAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN--MKAHLYK 199 (240)
Q Consensus 122 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~--~~~~~~l 199 (240)
..+...++.++|+..+++++..+|++... ++++|.++...|++++|+..|.++++.+|++ ..++..+
T Consensus 193 ~~l~~~~~~~~a~~~l~~al~~~P~~~~~-----------~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l 261 (287)
T 3qou_A 193 IELLXQAADTPEIQQLQQQVAENPEDAAL-----------ATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTF 261 (287)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHH
T ss_pred HHHHhhcccCccHHHHHHHHhcCCccHHH-----------HHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHH
Confidence 88999999999999999999999999888 9999999999999999999999999999988 8899999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHH
Q psy17412 200 ARAMHNLGQREEAKEYIRELVE 221 (240)
Q Consensus 200 a~~~~~~g~~~~A~~~~~~~~~ 221 (240)
+.++..+|+.++|...|++++.
T Consensus 262 ~~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 262 QEILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHcCCCCcHHHHHHHHHH
Confidence 9999999999999999999875
No 61
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.90 E-value=1.3e-22 Score=150.18 Aligned_cols=171 Identities=18% Similarity=0.109 Sum_probs=154.1
Q ss_pred chhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhc--------CCChHHHHHHHHHHHHccCcCchHHHHHHHHhc----
Q psy17412 42 RQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQV--------RDSPVLYTNRALTLLHLQLYDPVLPDCDKALRL---- 109 (240)
Q Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~--------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~---- 109 (240)
.+..+..+..+|.++...|++++|+..|++++... |....++..+|.++...|++++|+.++++++..
T Consensus 39 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 118 (283)
T 3edt_B 39 HPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKV 118 (283)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999884 555778999999999999999999999999987
Q ss_pred ----CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------CCCchHHHHHhccCchHHHHHHHHHHHHhcccCc
Q psy17412 110 ----DEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEK--------YPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDP 177 (240)
Q Consensus 110 ----~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~ 177 (240)
.|....++..+|.++...|++++|+.++++++++ .|.. ..++..+|.++...|++++
T Consensus 119 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~-----------~~~~~~la~~~~~~g~~~~ 187 (283)
T 3edt_B 119 LGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNV-----------AKTKNNLASCYLKQGKYQD 187 (283)
T ss_dssp HCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHH-----------HHHHHHHHHHHHHHTCHHH
T ss_pred cCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHH-----------HHHHHHHHHHHHHcCCHHH
Confidence 5778889999999999999999999999999998 3333 3459999999999999999
Q ss_pred hhhHHHHHhhc-------------------------------------------------ChhhHHHHHHHHHHHHHcCC
Q psy17412 178 VLPDCDKALRL-------------------------------------------------DEDNMKAHLYKARAMHNLGQ 208 (240)
Q Consensus 178 A~~~~~~~l~~-------------------------------------------------~~~~~~~~~~la~~~~~~g~ 208 (240)
|+..++++++. .|....++..+|.++..+|+
T Consensus 188 A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 267 (283)
T 3edt_B 188 AETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRSLGALYRRQGK 267 (283)
T ss_dssp HHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CCCCCCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCC
Confidence 99999999875 35667789999999999999
Q ss_pred HHHHHHHHHHHHHhC
Q psy17412 209 REEAKEYIRELVEKY 223 (240)
Q Consensus 209 ~~~A~~~~~~~~~~~ 223 (240)
+++|..+++++++..
T Consensus 268 ~~~A~~~~~~al~~~ 282 (283)
T 3edt_B 268 LEAAHTLEDCASRNR 282 (283)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998753
No 62
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.90 E-value=2.6e-22 Score=150.65 Aligned_cols=174 Identities=17% Similarity=0.140 Sum_probs=156.9
Q ss_pred hchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHh--------cCCChHHHHHHHHHHHHccCcCchHHHHHHHHhc---
Q psy17412 41 ARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQ--------VRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRL--- 109 (240)
Q Consensus 41 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--- 109 (240)
..|..+..+..+|..+...|++++|+.+++++++. .|....++..+|.++...|++++|+..+++++..
T Consensus 22 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 101 (311)
T 3nf1_A 22 EIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREK 101 (311)
T ss_dssp TSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999995 5566788999999999999999999999999977
Q ss_pred -----CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-----CCchHHHHHhccCchHHHHHHHHHHHHhcccCchh
Q psy17412 110 -----DEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKY-----PTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVL 179 (240)
Q Consensus 110 -----~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-----~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~ 179 (240)
.|....++..+|.++...|++++|+.++++++++. ++++.. ..++..+|.++...|++++|+
T Consensus 102 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~--------~~~~~~la~~~~~~~~~~~A~ 173 (311)
T 3nf1_A 102 TLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDV--------AKQLNNLALLCQNQGKYEEVE 173 (311)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHH--------HHHHHHHHHHHHTTTCHHHHH
T ss_pred HhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHH--------HHHHHHHHHHHHHcCCHHHHH
Confidence 46678899999999999999999999999999875 332322 556999999999999999999
Q ss_pred hHHHHHhhc--------ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q psy17412 180 PDCDKALRL--------DEDNMKAHLYKARAMHNLGQREEAKEYIRELVEK 222 (240)
Q Consensus 180 ~~~~~~l~~--------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 222 (240)
.+++++++. .|....++..+|.++...|++++|+.++++++..
T Consensus 174 ~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 224 (311)
T 3nf1_A 174 YYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTR 224 (311)
T ss_dssp HHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 999999988 7888899999999999999999999999999975
No 63
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.90 E-value=3.6e-23 Score=139.11 Aligned_cols=121 Identities=13% Similarity=0.042 Sum_probs=111.4
Q ss_pred cCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhccc
Q psy17412 96 YDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLY 175 (240)
Q Consensus 96 ~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~ 175 (240)
+-.+...+++++.++|+++.+++.+|.++...|++++|+..|++++.++|+++.. |.++|.++...|++
T Consensus 18 ~~~~~~~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~-----------~~~lg~~~~~~g~~ 86 (151)
T 3gyz_A 18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDY-----------IMGLAAIYQIKEQF 86 (151)
T ss_dssp HHHTSCCTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHTTCH
T ss_pred HHHCCCCHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH-----------HHHHHHHHHHHccH
Confidence 3334456777888999999999999999999999999999999999999998888 99999999999999
Q ss_pred CchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH
Q psy17412 176 DPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRR 227 (240)
Q Consensus 176 ~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~ 227 (240)
++|+..|+++++++|+++.+++++|.++..+|++++|+..|++++++.|+.+
T Consensus 87 ~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 87 QQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHHHHHHHHHSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 9999999999999999999999999999999999999999999999999875
No 64
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.90 E-value=1.3e-22 Score=151.67 Aligned_cols=179 Identities=11% Similarity=-0.043 Sum_probs=147.9
Q ss_pred HHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCC------ChHHHHHHHHHHHHccCcCchHHHHHHHHhcCccc------
Q psy17412 46 ADHFKANGNKAFQSGQYEAALVQYDKAIEQVRD------SPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN------ 113 (240)
Q Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~------ 113 (240)
...+...|.++...|++++|+..|.+++.+.+. .+.++.++|.+|...|++++|+.++++++.+.|..
T Consensus 37 ~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~ 116 (292)
T 1qqe_A 37 ADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRG 116 (292)
T ss_dssp HHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 345566688899999999999999999998542 25789999999999999999999999999887643
Q ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhh
Q psy17412 114 MKAHLYKARAMHSL-GQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN 192 (240)
Q Consensus 114 ~~~~~~la~~~~~~-~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~ 192 (240)
..++..+|.++... |++++|+.+|++++++.|..... .....++.++|.++...|++++|+.+|+++++..|++
T Consensus 117 a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~-----~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 191 (292)
T 1qqe_A 117 ANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSV-----ALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGN 191 (292)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH-----HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCCh-----HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcC
Confidence 56899999999996 99999999999999988753211 0113458999999999999999999999999998865
Q ss_pred HH-------HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHH
Q psy17412 193 MK-------AHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKL 229 (240)
Q Consensus 193 ~~-------~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~ 229 (240)
.. .+..+|.++..+|++++|+.+|++++.++|+....
T Consensus 192 ~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~ 235 (292)
T 1qqe_A 192 RLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADS 235 (292)
T ss_dssp TTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-------
T ss_pred CcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCc
Confidence 32 67899999999999999999999999999986553
No 65
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.90 E-value=8.1e-22 Score=147.94 Aligned_cols=174 Identities=16% Similarity=0.104 Sum_probs=156.1
Q ss_pred hchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhc--------CCChHHHHHHHHHHHHccCcCchHHHHHHHHhcC--
Q psy17412 41 ARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQV--------RDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLD-- 110 (240)
Q Consensus 41 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~--------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-- 110 (240)
..+..+..+..+|.++...|++++|+.++++++... |....++..+|.++...|++++|+..+++++...
T Consensus 64 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 143 (311)
T 3nf1_A 64 DHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREK 143 (311)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 367788999999999999999999999999999873 5557789999999999999999999999999874
Q ss_pred ------cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------CCCchHHHHHhccCchHHHHHHHHHHHHhcccC
Q psy17412 111 ------EDNMKAHLYKARAMHSLGQREEAKEYVRQLVEK--------YPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYD 176 (240)
Q Consensus 111 ------~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 176 (240)
|....++..+|.++...|++++|+.+++++++. .|.. ..++..+|.++...|+++
T Consensus 144 ~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~-----------~~~~~~la~~~~~~g~~~ 212 (311)
T 3nf1_A 144 VLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNV-----------AKTKNNLASCYLKQGKFK 212 (311)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHH-----------HHHHHHHHHHHHHHTCHH
T ss_pred hcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHH-----------HHHHHHHHHHHHHcCCHH
Confidence 667789999999999999999999999999987 3333 445999999999999999
Q ss_pred chhhHHHHHhhc-------------------------------------------------ChhhHHHHHHHHHHHHHcC
Q psy17412 177 PVLPDCDKALRL-------------------------------------------------DEDNMKAHLYKARAMHNLG 207 (240)
Q Consensus 177 ~A~~~~~~~l~~-------------------------------------------------~~~~~~~~~~la~~~~~~g 207 (240)
+|+..++++++. .|....++..+|.++..+|
T Consensus 213 ~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g 292 (311)
T 3nf1_A 213 QAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQG 292 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCC
Confidence 999999999974 4677888999999999999
Q ss_pred CHHHHHHHHHHHHHhCCC
Q psy17412 208 QREEAKEYIRELVEKYPT 225 (240)
Q Consensus 208 ~~~~A~~~~~~~~~~~p~ 225 (240)
++++|+.+|++++++.|.
T Consensus 293 ~~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 293 KFEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp CHHHHHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHHhhc
Confidence 999999999999998775
No 66
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.89 E-value=5.4e-22 Score=145.88 Aligned_cols=158 Identities=15% Similarity=0.127 Sum_probs=142.2
Q ss_pred HHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCccc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchH
Q psy17412 73 IEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN---MKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRK 149 (240)
Q Consensus 73 ~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 149 (240)
....|.++..++.+|..++..|++++|+..|++++...|++ +.+++.+|.++..+|++++|+..|+++++..|+++.
T Consensus 8 ~~~~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~ 87 (261)
T 3qky_A 8 GRLRHSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPR 87 (261)
T ss_dssp ---CCSSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTT
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCch
Confidence 34578889999999999999999999999999999999988 899999999999999999999999999999997654
Q ss_pred HHHHhccCchHHHHHHHHHHHH--------hcccCchhhHHHHHhhcChhhHHHH-----------------HHHHHHHH
Q psy17412 150 LAIEQVRDSPVLYTNRALTLLH--------LQLYDPVLPDCDKALRLDEDNMKAH-----------------LYKARAMH 204 (240)
Q Consensus 150 ~~~~~~~~~~~~~~~la~~~~~--------~~~~~~A~~~~~~~l~~~~~~~~~~-----------------~~la~~~~ 204 (240)
. +.+++.+|.++.. .|++++|+..|+++++.+|++..+. +.+|.++.
T Consensus 88 ~--------~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~ 159 (261)
T 3qky_A 88 V--------PQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYE 159 (261)
T ss_dssp H--------HHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred h--------HHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 5669999999999 9999999999999999999875554 88899999
Q ss_pred HcCCHHHHHHHHHHHHHhCCC---cHHHHHHHHHhhh
Q psy17412 205 NLGQREEAKEYIRELVEKYPT---RRKLVENYTQAFE 238 (240)
Q Consensus 205 ~~g~~~~A~~~~~~~~~~~p~---~~~~~~~l~~~~~ 238 (240)
..|++++|+..|++++..+|+ .+.++..++.++.
T Consensus 160 ~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~ 196 (261)
T 3qky_A 160 RRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYI 196 (261)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHH
Confidence 999999999999999999998 4567888877664
No 67
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.89 E-value=3e-21 Score=145.35 Aligned_cols=176 Identities=10% Similarity=-0.037 Sum_probs=162.9
Q ss_pred chhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChH-HHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHH
Q psy17412 42 RQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPV-LYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYK 120 (240)
Q Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~-~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 120 (240)
.|+....|...|..+...|++++|...|+++++..|.++. +|..+|.++...|++++|...|+++++..|....++...
T Consensus 95 ~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~ 174 (308)
T 2ond_A 95 LKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTA 174 (308)
T ss_dssp TTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHH
T ss_pred CcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 6888999999999999999999999999999999999887 999999999999999999999999999999988888877
Q ss_pred HHHHHH-cCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhc---Chh-hHHH
Q psy17412 121 ARAMHS-LGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRL---DED-NMKA 195 (240)
Q Consensus 121 a~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~---~~~-~~~~ 195 (240)
+.+... .|++++|...|+++++..|+++.. +..+|..+...|++++|+..|++++.. .|+ ...+
T Consensus 175 a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~-----------~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l 243 (308)
T 2ond_A 175 ALMEYYCSKDKSVAFKIFELGLKKYGDIPEY-----------VLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEI 243 (308)
T ss_dssp HHHHHHTSCCHHHHHHHHHHHHHHHTTCHHH-----------HHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCcHHH-----------HHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHHHH
Confidence 766544 799999999999999999998877 999999999999999999999999995 564 7889
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH
Q psy17412 196 HLYKARAMHNLGQREEAKEYIRELVEKYPTRRK 228 (240)
Q Consensus 196 ~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~ 228 (240)
|..++..+...|+.++|...++++++..|++..
T Consensus 244 ~~~~~~~~~~~g~~~~a~~~~~~a~~~~p~~~~ 276 (308)
T 2ond_A 244 WARFLAFESNIGDLASILKVEKRRFTAFREEYE 276 (308)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHTTTTTS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHcccccc
Confidence 999999999999999999999999999998543
No 68
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.89 E-value=3.4e-22 Score=149.42 Aligned_cols=191 Identities=11% Similarity=0.015 Sum_probs=156.7
Q ss_pred hHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCC------hHHHHHHHHHHHHc-cCcCchHHHHHHHHhcCccc---
Q psy17412 44 DIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDS------PVLYTNRALTLLHL-QLYDPVLPDCDKALRLDEDN--- 113 (240)
Q Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~la~~~~~~-~~~~~A~~~~~~~~~~~~~~--- 113 (240)
..+.++..+|.++...|++++|+.+|++++.+.|.. ..++.++|.+|... |++++|+.+|++++.+.|..
T Consensus 75 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~ 154 (292)
T 1qqe_A 75 EAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSV 154 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCCh
Confidence 457899999999999999999999999999998754 45889999999996 99999999999999988754
Q ss_pred ---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcCh
Q psy17412 114 ---MKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDE 190 (240)
Q Consensus 114 ---~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~ 190 (240)
..++..+|.++..+|++++|+.+|++++++.|++... .......+.++|.++...|++++|+..++++++++|
T Consensus 155 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~----~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p 230 (292)
T 1qqe_A 155 ALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLS----QWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDP 230 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTT----GGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC--
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcc----cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Confidence 5678999999999999999999999999999886431 001123588999999999999999999999999999
Q ss_pred hhHHH-----HHHHHHHHH--HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhh
Q psy17412 191 DNMKA-----HLYKARAMH--NLGQREEAKEYIRELVEKYPTRRKLVENYTQAFE 238 (240)
Q Consensus 191 ~~~~~-----~~~la~~~~--~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 238 (240)
+.... +..++..+. ..+++++|+..|++++.++|....++..+.+.++
T Consensus 231 ~~~~~~~~~~l~~l~~~~~~~~~~~~~~A~~~~~~~~~l~~~~~~~~~~~k~~~~ 285 (292)
T 1qqe_A 231 NFADSRESNFLKSLIDAVNEGDSEQLSEHCKEFDNFMRLDKWKITILNKIKESIQ 285 (292)
T ss_dssp -------HHHHHHHHHHHHTTCTTTHHHHHHHHTTSSCCCHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCccHHHHHHHHHHHHHHhh
Confidence 86543 444555554 4678999999999999999988888887777653
No 69
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.89 E-value=9.5e-23 Score=150.60 Aligned_cols=170 Identities=18% Similarity=0.088 Sum_probs=152.0
Q ss_pred HHhHhHHHHhCCHHHHHHHHHHHHHh----cCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHH
Q psy17412 50 KANGNKAFQSGQYEAALVQYDKAIEQ----VRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMH 125 (240)
Q Consensus 50 ~~~a~~~~~~~~~~~A~~~~~~a~~~----~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 125 (240)
..++......|++++|+..|+++++. .|.++.++..+|.++...|++++|+..|++++..+|.++.++..+|.++.
T Consensus 9 ~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~ 88 (275)
T 1xnf_A 9 EVLAVPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLT 88 (275)
T ss_dssp GGSCCCCCCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred cceeeccCccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Confidence 33455556678999999999999997 45668899999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHH
Q psy17412 126 SLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHN 205 (240)
Q Consensus 126 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~ 205 (240)
..|++++|+..++++++..|.+... +..+|.++...|++++|+..++++++.+|++.......+.. ..
T Consensus 89 ~~~~~~~A~~~~~~al~~~~~~~~~-----------~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~-~~ 156 (275)
T 1xnf_A 89 QAGNFDAAYEAFDSVLELDPTYNYA-----------HLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA-EQ 156 (275)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCTHH-----------HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH-HH
T ss_pred HccCHHHHHHHHHHHHhcCccccHH-----------HHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH-HH
Confidence 9999999999999999999998877 99999999999999999999999999999988766666544 66
Q ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHH
Q psy17412 206 LGQREEAKEYIRELVEKYPTRRKLVE 231 (240)
Q Consensus 206 ~g~~~~A~~~~~~~~~~~p~~~~~~~ 231 (240)
.|++++|+..+++++...|.+...+.
T Consensus 157 ~~~~~~A~~~~~~~~~~~~~~~~~~~ 182 (275)
T 1xnf_A 157 KLDEKQAKEVLKQHFEKSDKEQWGWN 182 (275)
T ss_dssp HHCHHHHHHHHHHHHHHSCCCSTHHH
T ss_pred hcCHHHHHHHHHHHHhcCCcchHHHH
Confidence 79999999999999998887755443
No 70
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.89 E-value=8.3e-21 Score=140.41 Aligned_cols=176 Identities=15% Similarity=-0.024 Sum_probs=159.4
Q ss_pred hhHHHHHHHhHhHHHH----hCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH----ccCcCchHHHHHHHHhcCcccH
Q psy17412 43 QDIADHFKANGNKAFQ----SGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLH----LQLYDPVLPDCDKALRLDEDNM 114 (240)
Q Consensus 43 ~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~~~~~~~ 114 (240)
+..+.+++.+|.++.. .+++++|+.+|+++++.+ ++.++..+|.+|.. .+++++|+.+|+++++.. ++
T Consensus 35 ~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~ 110 (273)
T 1ouv_A 35 LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YA 110 (273)
T ss_dssp TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CH
T ss_pred CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--Cc
Confidence 6778899999999999 999999999999999885 78899999999999 999999999999999874 78
Q ss_pred HHHHHHHHHHHH----cCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHH----hcccCchhhHHHHHh
Q psy17412 115 KAHLYKARAMHS----LGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLH----LQLYDPVLPDCDKAL 186 (240)
Q Consensus 115 ~~~~~la~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~l 186 (240)
.++..+|.++.. .+++++|+.+++++++.. ++.. +..+|.++.. .+++++|+.++++++
T Consensus 111 ~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a-----------~~~lg~~~~~~~~~~~~~~~A~~~~~~a~ 177 (273)
T 1ouv_A 111 EGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDG-----------CTILGSLYDAGRGTPKDLKKALASYDKAC 177 (273)
T ss_dssp HHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHH-----------HHHHHHHHHHTSSSCCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHH-----------HHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence 899999999999 999999999999999976 3444 8999999998 999999999999999
Q ss_pred hcChhhHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhhc
Q psy17412 187 RLDEDNMKAHLYKARAMHN----LGQREEAKEYIRELVEKYPTRRKLVENYTQAFEQ 239 (240)
Q Consensus 187 ~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 239 (240)
+.. ++.++..+|.++.. .+++++|+.+|+++++..| +.++..++.++.+
T Consensus 178 ~~~--~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~--~~a~~~l~~~~~~ 230 (273)
T 1ouv_A 178 DLK--DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN--GGGCFNLGAMQYN 230 (273)
T ss_dssp HTT--CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHT
T ss_pred HCC--CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC--HHHHHHHHHHHHc
Confidence 874 57889999999999 9999999999999999866 7788888887754
No 71
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.89 E-value=1.1e-22 Score=161.43 Aligned_cols=189 Identities=13% Similarity=0.045 Sum_probs=143.1
Q ss_pred HHHhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc-------------------cCcCc
Q psy17412 38 ERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHL-------------------QLYDP 98 (240)
Q Consensus 38 ~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~-------------------~~~~~ 98 (240)
.....|..+.++..+|.++...|++++|+..|+++++.+|+++.++..+|.+|... +.+++
T Consensus 239 al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (472)
T 4g1t_A 239 ALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGH 318 (472)
T ss_dssp HHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHH
T ss_pred HHHhCccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHH
Confidence 34567888999999999999999999999999999999999999999999998653 34678
Q ss_pred hHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHH-HHHhcccCc
Q psy17412 99 VLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALT-LLHLQLYDP 177 (240)
Q Consensus 99 A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~-~~~~~~~~~ 177 (240)
|+..+++++..+|.+..++..+|.++...|++++|+.+|++++++.|++... ..++..+|.+ ....|++++
T Consensus 319 A~~~~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 390 (472)
T 4g1t_A 319 AVAHLKKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPVAK--------QLLHLRYGNFQLYQMKCEDK 390 (472)
T ss_dssp HHHHHHHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHHH--------HHHHHHHHHHHHHTSSCHHH
T ss_pred HHHHHHHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCChHH--------HHHHHHHHHHHHHHCCCHHH
Confidence 9999999999999999999999999999999999999999999999886543 2345666654 457789999
Q ss_pred hhhHHHHHhhcC------------------------hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy17412 178 VLPDCDKALRLD------------------------EDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENY 233 (240)
Q Consensus 178 A~~~~~~~l~~~------------------------~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l 233 (240)
|+..|.+++++. |+++.++..+|.++..+|++++|+++|+++++..|.+|.+...+
T Consensus 391 Ai~~y~kal~i~~~~~~~~~~~~~l~~~~~~~l~~~p~~~~~~~~LG~~~~~~g~~~~A~~~y~kALe~~~~~p~a~~~~ 470 (472)
T 4g1t_A 391 AIHHFIEGVKINQKSREKEKMKDKLQKIAKMRLSKNGADSEALHVLAFLQELNEKMQQADEDSERGLESGSLIPSASSWN 470 (472)
T ss_dssp HHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHCC-CTTHHHHHHHHHHHHHHCC-----------------------
T ss_pred HHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcHhhcC
Confidence 999999988765 45567889999999999999999999999999999999888776
Q ss_pred H
Q psy17412 234 T 234 (240)
Q Consensus 234 ~ 234 (240)
|
T Consensus 471 G 471 (472)
T 4g1t_A 471 G 471 (472)
T ss_dssp -
T ss_pred C
Confidence 5
No 72
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.89 E-value=6.2e-22 Score=153.39 Aligned_cols=172 Identities=13% Similarity=0.085 Sum_probs=149.2
Q ss_pred HHHHhHhHHHHhCCHHHHHHHHHHHHHhc------CCChHHHHHHHHHHHHccCcCchHHHHHHHHhcC-------cccH
Q psy17412 48 HFKANGNKAFQSGQYEAALVQYDKAIEQV------RDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLD-------EDNM 114 (240)
Q Consensus 48 ~~~~~a~~~~~~~~~~~A~~~~~~a~~~~------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-------~~~~ 114 (240)
.++.+|..+...|++++|+..|++++... +..+.++..+|.+|...|++++|+.++++++.+. +...
T Consensus 105 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~ 184 (383)
T 3ulq_A 105 FNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLL 184 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHH
Confidence 34459999999999999999999999872 2246789999999999999999999999999874 3345
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhh-----cC
Q psy17412 115 KAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALR-----LD 189 (240)
Q Consensus 115 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~-----~~ 189 (240)
.++..+|.++..+|++++|+.++++++++.+.... .+..+.++.++|.++...|++++|+.+++++++ .+
T Consensus 185 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~-----~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~ 259 (383)
T 3ulq_A 185 QCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQ-----PQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNI 259 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCC-----hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcc
Confidence 68999999999999999999999999988654321 112245699999999999999999999999999 56
Q ss_pred -hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q psy17412 190 -EDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYP 224 (240)
Q Consensus 190 -~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p 224 (240)
|..+.++..+|.++..+|++++|+.++++++...+
T Consensus 260 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 260 LPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp GGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999998743
No 73
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.88 E-value=4.3e-20 Score=136.54 Aligned_cols=168 Identities=13% Similarity=0.028 Sum_probs=141.7
Q ss_pred hHHHHHHHhHhHHHH----hCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH----ccCcCchHHHHHHHHhcCcccHH
Q psy17412 44 DIADHFKANGNKAFQ----SGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLH----LQLYDPVLPDCDKALRLDEDNMK 115 (240)
Q Consensus 44 ~~~~~~~~~a~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~~~~~~~~ 115 (240)
..+.+++.+|.++.. .+++++|+.+|+++++. +++.++..+|.+|.. .+++++|+.+|+++++.. ++.
T Consensus 72 ~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~ 147 (273)
T 1ouv_A 72 NYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL--KYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGD 147 (273)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHH
T ss_pred CCHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc--CCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHH
Confidence 367888889999988 89999999999998887 478888899999988 899999999999998875 567
Q ss_pred HHHHHHHHHHH----cCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHH----hcccCchhhHHHHHhh
Q psy17412 116 AHLYKARAMHS----LGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLH----LQLYDPVLPDCDKALR 187 (240)
Q Consensus 116 ~~~~la~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~l~ 187 (240)
++..+|.++.. .+++++|+.+++++++.. ++.. +..+|.++.. .+++++|+.+++++++
T Consensus 148 a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a-----------~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~ 214 (273)
T 1ouv_A 148 GCTILGSLYDAGRGTPKDLKKALASYDKACDLK--DSPG-----------CFNAGNMYHHGEGATKNFKEALARYSKACE 214 (273)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHH-----------HHHHHHHHHHTCSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC--CHHH-----------HHHHHHHHHcCCCCCccHHHHHHHHHHHHh
Confidence 88889999888 889999999999988874 3344 8889999988 8899999999999988
Q ss_pred cChhhHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCcHHHH
Q psy17412 188 LDEDNMKAHLYKARAMHN----LGQREEAKEYIRELVEKYPTRRKLV 230 (240)
Q Consensus 188 ~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~~~~~~p~~~~~~ 230 (240)
..| +.++..+|.++.. .+++++|+.+|+++++..|++...+
T Consensus 215 ~~~--~~a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~ 259 (273)
T 1ouv_A 215 LEN--GGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDI 259 (273)
T ss_dssp TTC--HHHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHHHHHH
T ss_pred CCC--HHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHcCCHHHHHH
Confidence 765 6788889999988 8999999999999999887655444
No 74
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.87 E-value=1.4e-22 Score=136.23 Aligned_cols=114 Identities=9% Similarity=-0.135 Sum_probs=63.0
Q ss_pred HHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc
Q psy17412 68 QYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTR 147 (240)
Q Consensus 68 ~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~ 147 (240)
.+++++..+|+++.+++.+|.++...|++++|+..|++++.++|+++.+|..+|.++..+|++++|+..|+++++++|++
T Consensus 24 ~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~ 103 (151)
T 3gyz_A 24 TLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKND 103 (151)
T ss_dssp CTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSC
T ss_pred CHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCC
Confidence 34444445555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred hHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhh
Q psy17412 148 RKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN 192 (240)
Q Consensus 148 ~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~ 192 (240)
+.. ++++|.++...|++++|+..|++++++.|+.
T Consensus 104 ~~~-----------~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~ 137 (151)
T 3gyz_A 104 YTP-----------VFHTGQCQLRLKAPLKAKECFELVIQHSNDE 137 (151)
T ss_dssp CHH-----------HHHHHHHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred cHH-----------HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCH
Confidence 444 5555555555555555555555555555543
No 75
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.87 E-value=1.5e-21 Score=131.21 Aligned_cols=123 Identities=12% Similarity=0.057 Sum_probs=106.0
Q ss_pred chHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCc
Q psy17412 98 PVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDP 177 (240)
Q Consensus 98 ~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~ 177 (240)
.+...+++++.++|++..+++.+|.++...|++++|+..|++++..+|.++.. +..+|.++...|++++
T Consensus 5 ~~~~~~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~-----------~~~lg~~~~~~g~~~~ 73 (148)
T 2vgx_A 5 SGGGTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRF-----------FLGLGACRQAMGQYDL 73 (148)
T ss_dssp -CCCSHHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHTTCHHH
T ss_pred chhhhHHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHH-----------HHHHHHHHHHHhhHHH
Confidence 34456888888888888889999999999999999999999999998888777 8889999999999999
Q ss_pred hhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHH
Q psy17412 178 VLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVE 231 (240)
Q Consensus 178 A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~ 231 (240)
|+..|++++.++|+++.+++.+|.++..+|++++|+.+|+++++++|+++....
T Consensus 74 A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 127 (148)
T 2vgx_A 74 AIHSYSYGAVMDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFXE 127 (148)
T ss_dssp HHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHH
T ss_pred HHHHHHHHHhcCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchH
Confidence 999999999999988889999999999999999999999999988888766543
No 76
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.87 E-value=4.8e-21 Score=149.46 Aligned_cols=191 Identities=13% Similarity=0.072 Sum_probs=158.6
Q ss_pred chhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCCh----HHHHHHHHHHHHccCcCchHHHHHHHHhc------Cc
Q psy17412 42 RQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSP----VLYTNRALTLLHLQLYDPVLPDCDKALRL------DE 111 (240)
Q Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~----~~~~~la~~~~~~~~~~~A~~~~~~~~~~------~~ 111 (240)
.+..+..+..+|..+...|++++|+..|+++++..|+++ .++..+|.++...|++++|+..+++++.. .|
T Consensus 44 ~~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 123 (411)
T 4a1s_A 44 GSSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRL 123 (411)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred hhHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCch
Confidence 356788889999999999999999999999999999986 58899999999999999999999999987 57
Q ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcc-----------------
Q psy17412 112 DNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQL----------------- 174 (240)
Q Consensus 112 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~----------------- 174 (240)
....++..+|.++...|++++|+.++++++++.+... ..+....++..+|.++...|+
T Consensus 124 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~-----~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~ 198 (411)
T 4a1s_A 124 GEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLG-----DRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEA 198 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT-----CHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhh-----chHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHH
Confidence 7788999999999999999999999999998743311 111224558889999999999
Q ss_pred cCchhhHHHHHhhcC------hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH------HHHHHHHhh
Q psy17412 175 YDPVLPDCDKALRLD------EDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRK------LVENYTQAF 237 (240)
Q Consensus 175 ~~~A~~~~~~~l~~~------~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~------~~~~l~~~~ 237 (240)
+++|+.++.+++++. +....++..+|.++...|++++|+.++++++...+.... ++..++.++
T Consensus 199 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~ 273 (411)
T 4a1s_A 199 LTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSH 273 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Confidence 888888888887764 334567888999999999999999999998887765433 556666554
No 77
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.86 E-value=1.2e-20 Score=146.05 Aligned_cols=175 Identities=14% Similarity=0.086 Sum_probs=151.1
Q ss_pred HHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcC------CChHHHHHHHHHHHHccCcCchHHHHHHHHhcCc-------c
Q psy17412 46 ADHFKANGNKAFQSGQYEAALVQYDKAIEQVR------DSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDE-------D 112 (240)
Q Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-------~ 112 (240)
...++.+|..+...|++++|+..|++++...+ ..+.++..+|.+|...|++++|+.++++++...+ .
T Consensus 101 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 180 (378)
T 3q15_A 101 YYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIR 180 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHH
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhh
Confidence 34677899999999999999999999998743 2367899999999999999999999999997643 2
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhh-----
Q psy17412 113 NMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALR----- 187 (240)
Q Consensus 113 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~----- 187 (240)
...++..+|.++..+|++++|+.++++++++.+.... .+..+.++.++|.++...|++++|+.+++++++
T Consensus 181 ~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~-----~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~ 255 (378)
T 3q15_A 181 TIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQN-----DRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREK 255 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC-----HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh
Confidence 3568899999999999999999999999987542111 112245699999999999999999999999999
Q ss_pred cChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q psy17412 188 LDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPT 225 (240)
Q Consensus 188 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~ 225 (240)
.+|....++..+|.++..+|++++|+.++++++...+.
T Consensus 256 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 256 VPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp CGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred CChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 78888999999999999999999999999999998543
No 78
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.86 E-value=3.1e-21 Score=150.53 Aligned_cols=187 Identities=16% Similarity=0.140 Sum_probs=146.6
Q ss_pred HHHHHHhHhHHHHhCCHHHHHHHHHHHHHh------cCCChHHHHHHHHHHHHccCcCchHHHHHHHHhc------Cccc
Q psy17412 46 ADHFKANGNKAFQSGQYEAALVQYDKAIEQ------VRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRL------DEDN 113 (240)
Q Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~------~~~~ 113 (240)
+..+..+|.++...|++++|+..|++++.. .|....++..+|.++...|++++|+..+++++.. .+..
T Consensus 86 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 165 (411)
T 4a1s_A 86 SAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSE 165 (411)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHH
Confidence 468999999999999999999999999998 5666789999999999999999999999999988 5666
Q ss_pred HHHHHHHHHHHHHcCC-----------------HHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccC
Q psy17412 114 MKAHLYKARAMHSLGQ-----------------REEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYD 176 (240)
Q Consensus 114 ~~~~~~la~~~~~~~~-----------------~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 176 (240)
..++..+|.++...|+ +++|+.++++++++.+... ..+....++..+|.++...|+++
T Consensus 166 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~-----~~~~~~~~~~~la~~~~~~g~~~ 240 (411)
T 4a1s_A 166 GRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLG-----DRGAQGRACGNLGNTYYLLGDFQ 240 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHT-----CHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHHHHHHcCChH
Confidence 7799999999999999 9999999999988653311 11122445777777777778888
Q ss_pred chhhHHHHHhhcChhhH------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc------HHHHHHHHHhh
Q psy17412 177 PVLPDCDKALRLDEDNM------KAHLYKARAMHNLGQREEAKEYIRELVEKYPTR------RKLVENYTQAF 237 (240)
Q Consensus 177 ~A~~~~~~~l~~~~~~~------~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~------~~~~~~l~~~~ 237 (240)
+|+.+++++++..+... .++..+|.++...|++++|+.++++++...+.. ..++..++.++
T Consensus 241 ~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~ 313 (411)
T 4a1s_A 241 AAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTY 313 (411)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 88877777777665432 267777777777777777777777777765533 34455555544
No 79
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.86 E-value=1.3e-20 Score=130.76 Aligned_cols=148 Identities=19% Similarity=0.238 Sum_probs=141.8
Q ss_pred hHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCch
Q psy17412 80 PVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSP 159 (240)
Q Consensus 80 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~ 159 (240)
...+..+|.++...|++++|+..+++++...|.++.++..+|.++...|++++|+..++++++..|.+...
T Consensus 8 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--------- 78 (186)
T 3as5_A 8 QVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKV--------- 78 (186)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH---------
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHH---------
Confidence 56788999999999999999999999999999999999999999999999999999999999999988777
Q ss_pred HHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhh
Q psy17412 160 VLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFE 238 (240)
Q Consensus 160 ~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 238 (240)
+..+|.++...|++++|+..++++++..|.+..++..+|.++...|++++|+.++++++...|.++.++..++.++.
T Consensus 79 --~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 155 (186)
T 3as5_A 79 --ATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYE 155 (186)
T ss_dssp --HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888764
No 80
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.86 E-value=2e-21 Score=144.41 Aligned_cols=177 Identities=23% Similarity=0.308 Sum_probs=151.0
Q ss_pred hHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHH
Q psy17412 44 DIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARA 123 (240)
Q Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 123 (240)
..+..+..+|..++..|++++|+..|++++..+|+++.++.++|.++...|++++|+..++++++++|+++.+++.+|.+
T Consensus 2 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (281)
T 2c2l_A 2 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 81 (281)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHcCCCchHH--------------------HHHhccCchHHHHHHHHHHHHhcccCchhhHHH
Q psy17412 124 MHSLGQREEAKEYVRQLVEKYPTRRKL--------------------AIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCD 183 (240)
Q Consensus 124 ~~~~~~~~~A~~~~~~a~~~~~~~~~~--------------------~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 183 (240)
+..+|++++|+..|+++++++|++... .....+..+.+...++.+. .|++++|++.++
T Consensus 82 ~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l~--~~~~~~A~~~~~ 159 (281)
T 2c2l_A 82 QLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLTRLI--AAERERELEECQ 159 (281)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHH--HHHHHHHHTTTS
T ss_pred HHHcCCHHHHHHHHHHHHHhCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 999999999999999999998865311 1111234445555555543 688899999999
Q ss_pred HHhhcChhhHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHh
Q psy17412 184 KALRLDEDNMKAHLYKARAMHNL-GQREEAKEYIRELVEK 222 (240)
Q Consensus 184 ~~l~~~~~~~~~~~~la~~~~~~-g~~~~A~~~~~~~~~~ 222 (240)
++++.+|++......++.++... +.+++|...|.++.+.
T Consensus 160 ~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~f~~a~~~ 199 (281)
T 2c2l_A 160 RNHEGHEDDGHIRAQQACIEAKHDKYMADMDELFSQVDEK 199 (281)
T ss_dssp GGGTTTSCHHHHTHHHHHHHHHHHHHHHHHHHHHHHSSCT
T ss_pred hhhccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 99999998888877777777766 7788888888887654
No 81
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.86 E-value=7.3e-21 Score=147.86 Aligned_cols=189 Identities=14% Similarity=0.089 Sum_probs=152.3
Q ss_pred hHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCC----hHHHHHHHHHHHHccCcCchHHHHHHHHhc------Cccc
Q psy17412 44 DIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDS----PVLYTNRALTLLHLQLYDPVLPDCDKALRL------DEDN 113 (240)
Q Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~------~~~~ 113 (240)
..+..++..|..+...|++++|+..|+++++..|.+ ..++..+|.++...|++++|+..+++++.+ .|..
T Consensus 7 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 86 (406)
T 3sf4_A 7 ASCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGE 86 (406)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHH
Confidence 456788999999999999999999999999999988 468889999999999999999999999877 3556
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcc-------------------
Q psy17412 114 MKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQL------------------- 174 (240)
Q Consensus 114 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~------------------- 174 (240)
..++..+|.++...|++++|+.++++++++.|..... +..+.++..+|.++...|+
T Consensus 87 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~-----~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~ 161 (406)
T 3sf4_A 87 AKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDK-----VGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRD 161 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCH-----HHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccc-----cchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHH
Confidence 7799999999999999999999999999987653221 1124457888888888888
Q ss_pred -cCchhhHHHHHhhc------ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH------HHHHHHHhh
Q psy17412 175 -YDPVLPDCDKALRL------DEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRK------LVENYTQAF 237 (240)
Q Consensus 175 -~~~A~~~~~~~l~~------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~------~~~~l~~~~ 237 (240)
+++|+..+.++++. .|....++..+|.++...|++++|+.++++++...|.... ++..++.++
T Consensus 162 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~ 237 (406)
T 3sf4_A 162 ALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAY 237 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Confidence 88888888888766 3445667788888888888888888888888876554333 555555544
No 82
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.85 E-value=1e-20 Score=147.01 Aligned_cols=191 Identities=14% Similarity=0.052 Sum_probs=150.1
Q ss_pred chhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCC------hHHHHHHHHHHHHccC--------------------
Q psy17412 42 RQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDS------PVLYTNRALTLLHLQL-------------------- 95 (240)
Q Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~la~~~~~~~~-------------------- 95 (240)
.+..+.++..+|.++...|++++|+..+++++...|.. ..++..+|.++...|+
T Consensus 83 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~ 162 (406)
T 3sf4_A 83 QLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDA 162 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHH
Confidence 45668889999999999999999999999999887653 4588899999999999
Q ss_pred cCchHHHHHHHHhc------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHH
Q psy17412 96 YDPVLPDCDKALRL------DEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTL 169 (240)
Q Consensus 96 ~~~A~~~~~~~~~~------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 169 (240)
+++|+..+++++.+ .|....++..+|.++...|++++|+.++++++++.+..... +....++.++|.++
T Consensus 163 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~-----~~~~~~~~~la~~~ 237 (406)
T 3sf4_A 163 LQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDK-----AAERRAYSNLGNAY 237 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCH-----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCc-----HHHHHHHHHHHHHH
Confidence 99999999998876 34456688999999999999999999999999876653321 11134578888888
Q ss_pred HHhcccCchhhHHHHHhhcChhh------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc------HHHHHHHHHhh
Q psy17412 170 LHLQLYDPVLPDCDKALRLDEDN------MKAHLYKARAMHNLGQREEAKEYIRELVEKYPTR------RKLVENYTQAF 237 (240)
Q Consensus 170 ~~~~~~~~A~~~~~~~l~~~~~~------~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~------~~~~~~l~~~~ 237 (240)
...|++++|+.+++++++..|.. ..++..+|.++...|++++|+.++++++...+.. ..++..++.++
T Consensus 238 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~ 317 (406)
T 3sf4_A 238 IFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAY 317 (406)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Confidence 88888888888888888776654 6677888888888888888888888887764433 34555555544
No 83
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.85 E-value=9.4e-23 Score=155.21 Aligned_cols=179 Identities=15% Similarity=0.156 Sum_probs=153.0
Q ss_pred HhCCHHHHHHHHHH----HHHhcCCChHHHHHHHHHHH------------HccCcCchHHHHHHHHhcCcccHHHHHHHH
Q psy17412 58 QSGQYEAALVQYDK----AIEQVRDSPVLYTNRALTLL------------HLQLYDPVLPDCDKALRLDEDNMKAHLYKA 121 (240)
Q Consensus 58 ~~~~~~~A~~~~~~----a~~~~~~~~~~~~~la~~~~------------~~~~~~~A~~~~~~~~~~~~~~~~~~~~la 121 (240)
..+.+++|+..++. ++.+.|+. ++..+|.... .++++++|+..+++++...|..+.++..+|
T Consensus 77 ~~~~~e~al~~~~~Ge~~~l~i~p~~--ayg~~g~~~~~i~~~~~l~f~~~L~~~~~A~~~~~~a~~~~p~~a~~~~~~g 154 (336)
T 1p5q_A 77 LPYGLERAIQRMEKGEHSIVYLKPSY--AFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERG 154 (336)
T ss_dssp CCHHHHHHHTTCCTTCEEEEEECTTT--TTTTTCBGGGTBCSSCCEEEEEEEEEEECCCCGGGCCHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHhcCCCCCeEEEEECCcc--ccCcCCCCccCCCCCCeEEEEEEEeecccccchhcCCHHHHHHHHHHHHHHH
Confidence 34578888888888 77888876 4545554432 567889999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCchH----HHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHH
Q psy17412 122 RAMHSLGQREEAKEYVRQLVEKYPTRRK----LAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHL 197 (240)
Q Consensus 122 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~----~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~ 197 (240)
.+++..|++++|+..|++++++.|.+.. ......+....++.++|.++...|++++|+..++++++++|+++.+++
T Consensus 155 ~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~ 234 (336)
T 1p5q_A 155 TVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLS 234 (336)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHH
Confidence 9999999999999999999999998731 001111222345999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhh
Q psy17412 198 YKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFE 238 (240)
Q Consensus 198 ~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 238 (240)
.+|.++..+|++++|+..|+++++++|+++.++..++.++.
T Consensus 235 ~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~ 275 (336)
T 1p5q_A 235 RRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQ 275 (336)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988764
No 84
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.85 E-value=4.6e-20 Score=132.68 Aligned_cols=153 Identities=14% Similarity=0.095 Sum_probs=134.5
Q ss_pred ChHHHHHHHHHHHHccCcCchHHHHHHHHhcCccc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhc
Q psy17412 79 SPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN---MKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQV 155 (240)
Q Consensus 79 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 155 (240)
++..++.+|..++..|++++|+..|++++...|.+ ..+++.+|.++..+|++++|+..|+++++.+|+++..
T Consensus 3 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~----- 77 (225)
T 2yhc_A 3 PPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNI----- 77 (225)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTH-----
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcH-----
Confidence 46788999999999999999999999999998876 4789999999999999999999999999999998754
Q ss_pred cCchHHHHHHHHHHHH------------------hcccCchhhHHHHHhhcChhhHHHH-----------------HHHH
Q psy17412 156 RDSPVLYTNRALTLLH------------------LQLYDPVLPDCDKALRLDEDNMKAH-----------------LYKA 200 (240)
Q Consensus 156 ~~~~~~~~~la~~~~~------------------~~~~~~A~~~~~~~l~~~~~~~~~~-----------------~~la 200 (240)
+.+++.+|.++.. .|++++|+..|+++++.+|++..++ ..+|
T Consensus 78 ---~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a 154 (225)
T 2yhc_A 78 ---DYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVA 154 (225)
T ss_dssp ---HHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3458888888876 5799999999999999999875443 5789
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCcH---HHHHHHHHhhhc
Q psy17412 201 RAMHNLGQREEAKEYIRELVEKYPTRR---KLVENYTQAFEQ 239 (240)
Q Consensus 201 ~~~~~~g~~~~A~~~~~~~~~~~p~~~---~~~~~l~~~~~~ 239 (240)
.++...|++++|+..|+++++.+|+++ +++..++.++.+
T Consensus 155 ~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~ 196 (225)
T 2yhc_A 155 EYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQ 196 (225)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHH
Confidence 999999999999999999999999986 567777777643
No 85
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.85 E-value=5.4e-20 Score=137.10 Aligned_cols=153 Identities=17% Similarity=0.197 Sum_probs=143.4
Q ss_pred hcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHh
Q psy17412 75 QVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQ 154 (240)
Q Consensus 75 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 154 (240)
..|++...+..+|..+...|++++|+..|++++..+|+++.+++.+|.++...|++++|+..+++++...|+....
T Consensus 112 ~lp~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~---- 187 (287)
T 3qou_A 112 VLPREEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQ---- 187 (287)
T ss_dssp HSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHH----
T ss_pred HcCCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHH----
Confidence 3488889999999999999999999999999999999999999999999999999999999999999999976555
Q ss_pred ccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc--HHHHHH
Q psy17412 155 VRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTR--RKLVEN 232 (240)
Q Consensus 155 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~--~~~~~~ 232 (240)
....+..+...++.++|+..+++++..+|+++.+++.+|.++...|++++|+..|.++++.+|++ ..++..
T Consensus 188 -------~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~ 260 (287)
T 3qou_A 188 -------GLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXT 260 (287)
T ss_dssp -------HHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHH
T ss_pred -------HHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHH
Confidence 77777888899999999999999999999999999999999999999999999999999999998 888998
Q ss_pred HHHhhh
Q psy17412 233 YTQAFE 238 (240)
Q Consensus 233 l~~~~~ 238 (240)
++.++.
T Consensus 261 l~~~~~ 266 (287)
T 3qou_A 261 FQEILA 266 (287)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888765
No 86
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.85 E-value=7.5e-22 Score=150.25 Aligned_cols=152 Identities=18% Similarity=0.169 Sum_probs=100.7
Q ss_pred hCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCccc---------------HHHHHHHHHH
Q psy17412 59 SGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN---------------MKAHLYKARA 123 (240)
Q Consensus 59 ~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~la~~ 123 (240)
.+++++|+..+++++...|..+.++..+|.+++..|++++|+..|++++.+.|.+ ..++.++|.+
T Consensus 126 L~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~ 205 (336)
T 1p5q_A 126 LKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMC 205 (336)
T ss_dssp EEEEECCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred EeecccccchhcCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555666666566666666666666666666666666666666666655 4667777777
Q ss_pred HHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHH
Q psy17412 124 MHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAM 203 (240)
Q Consensus 124 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~ 203 (240)
+..+|++++|+..++++++++|++... ++++|.++...|++++|+..|+++++++|++..++..++.++
T Consensus 206 ~~~~g~~~~A~~~~~~al~~~p~~~~a-----------~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~ 274 (336)
T 1p5q_A 206 HLKLQAFSAAIESCNKALELDSNNEKG-----------LSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQ 274 (336)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHH-----------HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 777777777777777777777766655 777777777777777777777777777777777777777777
Q ss_pred HHcCCHHHH-HHHHHHHHH
Q psy17412 204 HNLGQREEA-KEYIRELVE 221 (240)
Q Consensus 204 ~~~g~~~~A-~~~~~~~~~ 221 (240)
..+|++++| ...|++++.
T Consensus 275 ~~~~~~~~a~~~~~~~~~~ 293 (336)
T 1p5q_A 275 QRIRRQLAREKKLYANMFE 293 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 777777766 345555543
No 87
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.85 E-value=2.6e-20 Score=140.82 Aligned_cols=176 Identities=14% Similarity=0.088 Sum_probs=143.7
Q ss_pred HHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCC----hHHHHHHHHHHHHccCcCchHHHHHHHHhc------CcccH
Q psy17412 45 IADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDS----PVLYTNRALTLLHLQLYDPVLPDCDKALRL------DEDNM 114 (240)
Q Consensus 45 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~------~~~~~ 114 (240)
....++..|..+...|++++|+..|+++++..|++ ..++..+|.++...|++++|+..+++++.. .|...
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 83 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 83 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHH
Confidence 45678889999999999999999999999999988 468889999999999999999999999877 45567
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcc--------------------
Q psy17412 115 KAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQL-------------------- 174 (240)
Q Consensus 115 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-------------------- 174 (240)
.++..+|.++...|++++|+..+++++++.+..... +....++..+|.++...|+
T Consensus 84 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 158 (338)
T 3ro2_A 84 KASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDK-----VGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNA 158 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH-----HHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCc-----hHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHH
Confidence 789999999999999999999999999876543221 1123457788888888888
Q ss_pred cCchhhHHHHHhhc------ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q psy17412 175 YDPVLPDCDKALRL------DEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPT 225 (240)
Q Consensus 175 ~~~A~~~~~~~l~~------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~ 225 (240)
+++|+..+++++.. .+....++..+|.++...|++++|+.++++++...+.
T Consensus 159 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 215 (338)
T 3ro2_A 159 LQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKE 215 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 88888888877765 2334567778888888888888888888888776543
No 88
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.85 E-value=1.1e-20 Score=126.15 Aligned_cols=122 Identities=12% Similarity=0.061 Sum_probs=92.3
Q ss_pred HHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhh
Q psy17412 101 PDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLP 180 (240)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 180 (240)
..|++++..+|++...++.+|.++...|++++|+..|++++..+|+++.. +..+|.++...|++++|+.
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~-----------~~~lg~~~~~~g~~~~A~~ 73 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARY-----------FLGLGACRQSLGLYEQALQ 73 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHTTCHHHHHH
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHH-----------HHHHHHHHHHHhhHHHHHH
Confidence 45666777777777778888888888888888888888888888877666 7788888888888888888
Q ss_pred HHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy17412 181 DCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENY 233 (240)
Q Consensus 181 ~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l 233 (240)
.|++++..+|+++.+++.+|.++..+|++++|+.+|++++.++|+++......
T Consensus 74 ~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 126 (142)
T 2xcb_A 74 SYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALA 126 (142)
T ss_dssp HHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHH
T ss_pred HHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHH
Confidence 88888888888888888888888888888888888888888777766554443
No 89
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.85 E-value=6e-20 Score=138.18 Aligned_cols=176 Identities=15% Similarity=0.125 Sum_probs=148.6
Q ss_pred HHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCC------hHHHHHHHHHHHHccCcCchHHHHHHHHhcCcc------c
Q psy17412 46 ADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDS------PVLYTNRALTLLHLQLYDPVLPDCDKALRLDED------N 113 (240)
Q Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~------~ 113 (240)
...+...|.++...|++++|+..|.+++...+.. ..++.++|.+|...|++++|+.+|++++.+.+. .
T Consensus 36 ~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~ 115 (307)
T 2ifu_A 36 ASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTA 115 (307)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 4456667888999999999999999999986543 568899999999999999999999999987532 3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhh-
Q psy17412 114 MKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN- 192 (240)
Q Consensus 114 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~- 192 (240)
..++..+|.++.. |++++|+.+|++++++.|..... .....++.++|.++...|++++|+.+|++++++.|.+
T Consensus 116 a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~-----~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 189 (307)
T 2ifu_A 116 AMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERL-----RQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEME 189 (307)
T ss_dssp HHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCH-----HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCCh-----hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Confidence 5688999999999 99999999999999987653110 1124569999999999999999999999999987653
Q ss_pred -----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH
Q psy17412 193 -----MKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRK 228 (240)
Q Consensus 193 -----~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~ 228 (240)
...+..+|.++..+|++++|+.+|++++ .+|....
T Consensus 190 ~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~ 229 (307)
T 2ifu_A 190 NYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFSG 229 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTT
T ss_pred ChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCC
Confidence 3478889999999999999999999999 9997543
No 90
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.85 E-value=8.7e-20 Score=147.14 Aligned_cols=188 Identities=12% Similarity=0.078 Sum_probs=166.6
Q ss_pred HHHhchhHHHHHHHhHhHHHH-------hCCHH-------HHHHHHHHHHH-hcCCChHHHHHHHHHHHHccCcCchHHH
Q psy17412 38 ERKARQDIADHFKANGNKAFQ-------SGQYE-------AALVQYDKAIE-QVRDSPVLYTNRALTLLHLQLYDPVLPD 102 (240)
Q Consensus 38 ~~~~~~~~~~~~~~~a~~~~~-------~~~~~-------~A~~~~~~a~~-~~~~~~~~~~~la~~~~~~~~~~~A~~~ 102 (240)
.....|..+..|+..|..+.. .|+++ +|+..|+++++ ..|++..+|..+|.++...|++++|...
T Consensus 264 al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g~~~~A~~~ 343 (530)
T 2ooe_A 264 CLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSI 343 (530)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHH
Confidence 345578889999999999886 79987 99999999997 7999999999999999999999999999
Q ss_pred HHHHHhcCcccH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHH-HHHhcccCchhh
Q psy17412 103 CDKALRLDEDNM-KAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALT-LLHLQLYDPVLP 180 (240)
Q Consensus 103 ~~~~~~~~~~~~-~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~-~~~~~~~~~A~~ 180 (240)
|+++++..|.++ .+|..+|.++.+.|++++|...|+++++..|..... +...+.+ +...|++++|..
T Consensus 344 ~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~-----------~~~~a~~~~~~~~~~~~A~~ 412 (530)
T 2ooe_A 344 YNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHV-----------YVTAALMEYYCSKDKSVAFK 412 (530)
T ss_dssp HHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHH-----------HHHHHHHHHHHTCCHHHHHH
T ss_pred HHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHH-----------HHHHHHHHHHHcCChhHHHH
Confidence 999999999885 699999999999999999999999999998876555 6655554 346899999999
Q ss_pred HHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH----HHHHHHHh
Q psy17412 181 DCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRK----LVENYTQA 236 (240)
Q Consensus 181 ~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~----~~~~l~~~ 236 (240)
.|+++++..|+++.+|..++.++...|+.++|...|++++...|.++. +|..+.+.
T Consensus 413 ~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~~~~~~~~~~lw~~~~~~ 472 (530)
T 2ooe_A 413 IFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAF 472 (530)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHSCCSCGGGCHHHHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHhCCCHhhHHHHHHHHHhccCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998776654 66655543
No 91
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.85 E-value=8e-20 Score=120.16 Aligned_cols=133 Identities=26% Similarity=0.284 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHH
Q psy17412 82 LYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVL 161 (240)
Q Consensus 82 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 161 (240)
+++.+|.++...|++++|+..+++++...|.+..++..+|.++...|++++|+..+++++...|.+...
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~----------- 71 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEA----------- 71 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHH-----------
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHH-----------
Confidence 344555555555555555555555555555555555556666666666666666666666655555444
Q ss_pred HHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q psy17412 162 YTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPT 225 (240)
Q Consensus 162 ~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~ 225 (240)
+..+|.++...|++++|+..++++++..|.+..++..+|.++...|++++|..++++++..+|.
T Consensus 72 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 72 WYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR 135 (136)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCC
Confidence 5566666666666666666666666666666666666666666666666666666666666554
No 92
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.85 E-value=1.3e-20 Score=139.27 Aligned_cols=158 Identities=16% Similarity=0.110 Sum_probs=138.8
Q ss_pred HHhCCHHHHHHHHHHHHHhc--------CCChHHHHHHHHHHHHccCcCchHHHHHHHHhc--------CcccHHHHHHH
Q psy17412 57 FQSGQYEAALVQYDKAIEQV--------RDSPVLYTNRALTLLHLQLYDPVLPDCDKALRL--------DEDNMKAHLYK 120 (240)
Q Consensus 57 ~~~~~~~~A~~~~~~a~~~~--------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l 120 (240)
...|++++|+.+|+++++.. |....++..+|.++...|++++|+..+++++.. .|....++..+
T Consensus 12 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l 91 (283)
T 3edt_B 12 SGLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNL 91 (283)
T ss_dssp -CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHH
Confidence 35678888888888888752 555788999999999999999999999999977 47778899999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHcC-----CCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhc-------
Q psy17412 121 ARAMHSLGQREEAKEYVRQLVEKY-----PTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRL------- 188 (240)
Q Consensus 121 a~~~~~~~~~~~A~~~~~~a~~~~-----~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~------- 188 (240)
|.++...|++++|+.++++++... ++++.. ..++.++|.++...|++++|+.+++++++.
T Consensus 92 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~--------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 163 (283)
T 3edt_B 92 AVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDV--------AKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGP 163 (283)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHH--------HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCT
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHH--------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999883 322222 455999999999999999999999999998
Q ss_pred -ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q psy17412 189 -DEDNMKAHLYKARAMHNLGQREEAKEYIRELVEK 222 (240)
Q Consensus 189 -~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 222 (240)
.|....++..+|.++..+|++++|+.++++++..
T Consensus 164 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 164 DDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp TCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 7888999999999999999999999999999986
No 93
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.85 E-value=3e-19 Score=133.47 Aligned_cols=175 Identities=13% Similarity=0.095 Sum_probs=148.1
Q ss_pred chhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCCh------HHHHHHHHHHHHccCcCchHHHHHHHHhcCccc--
Q psy17412 42 RQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSP------VLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN-- 113 (240)
Q Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~------~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-- 113 (240)
.+.....+...+..+...|+|++|++.+.++++..+... ..++.+|.++...|++++|+..+++++...+..
T Consensus 71 ~~~~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~ 150 (293)
T 2qfc_A 71 DIERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGID 150 (293)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSC
T ss_pred chhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCc
Confidence 345667788899999999999999999999999877653 346678999999999999999999999765432
Q ss_pred ----HHHHHHHHHHHHHcCCHHHHHHHHHHHH---HcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHh
Q psy17412 114 ----MKAHLYKARAMHSLGQREEAKEYVRQLV---EKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKAL 186 (240)
Q Consensus 114 ----~~~~~~la~~~~~~~~~~~A~~~~~~a~---~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l 186 (240)
..++..+|.++..+|++++|+.++++++ +..|++... ...++.++|.+|...|++++|+.++++++
T Consensus 151 ~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~-------~~~~~~nlg~~y~~~~~y~~Al~~~~kal 223 (293)
T 2qfc_A 151 VYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF-------DVKVRYNHAKALYLDSRYEESLYQVNKAI 223 (293)
T ss_dssp TTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHH-------HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccc-------hHHHHHhHHHHHHHHhhHHHHHHHHHHHH
Confidence 5689999999999999999999999999 445554322 12469999999999999999999999999
Q ss_pred hcChh------hHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHhC
Q psy17412 187 RLDED------NMKAHLYKARAMHNLGQREEA-KEYIRELVEKY 223 (240)
Q Consensus 187 ~~~~~------~~~~~~~la~~~~~~g~~~~A-~~~~~~~~~~~ 223 (240)
+..+. ...++.++|.++..+|++++| ..++++++.+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 224 EISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 88654 278899999999999999999 88899988654
No 94
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.85 E-value=4.3e-19 Score=132.19 Aligned_cols=171 Identities=16% Similarity=0.175 Sum_probs=161.1
Q ss_pred HhCCH-HHHHHHHHHHHHhcCCChHHHHHHHHHHHHcc--CcCchHHHHHHHHhcCcccHHHHHHHHHHH----HHc---
Q psy17412 58 QSGQY-EAALVQYDKAIEQVRDSPVLYTNRALTLLHLQ--LYDPVLPDCDKALRLDEDNMKAHLYKARAM----HSL--- 127 (240)
Q Consensus 58 ~~~~~-~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~--~~~~A~~~~~~~~~~~~~~~~~~~~la~~~----~~~--- 127 (240)
..|.+ ++|+..+.+++.++|++..+|..++.+...+| ++++++..+.+++..+|.+..+|..++.++ ...
T Consensus 44 ~~~e~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~ 123 (306)
T 3dra_A 44 KAEEYSERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNND 123 (306)
T ss_dssp HTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTC
T ss_pred HcCCCCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhcccc
Confidence 34444 68999999999999999999999999999999 999999999999999999999999999999 777
Q ss_pred CCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccC--chhhHHHHHhhcChhhHHHHHHHHHHHHH
Q psy17412 128 GQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYD--PVLPDCDKALRLDEDNMKAHLYKARAMHN 205 (240)
Q Consensus 128 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~--~A~~~~~~~l~~~~~~~~~~~~la~~~~~ 205 (240)
+++++++..++++++.+|.+..+ |...+.+....|.++ ++++.++++++.+|.+..+|..++.+...
T Consensus 124 ~~~~~EL~~~~~~l~~~pkny~a-----------W~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~ 192 (306)
T 3dra_A 124 FDPYREFDILEAMLSSDPKNHHV-----------WSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFS 192 (306)
T ss_dssp CCTHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHhCCCCHHH-----------HHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 78999999999999999999888 999999999999999 99999999999999999999999999999
Q ss_pred cCC------HHHHHHHHHHHHHhCCCcHHHHHHHHHhhhc
Q psy17412 206 LGQ------REEAKEYIRELVEKYPTRRKLVENYTQAFEQ 239 (240)
Q Consensus 206 ~g~------~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 239 (240)
.|+ ++++++++.+++..+|.+..+|..++.++.+
T Consensus 193 l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~ 232 (306)
T 3dra_A 193 KKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHER 232 (306)
T ss_dssp SGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred ccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHh
Confidence 988 9999999999999999999999998887753
No 95
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.84 E-value=9.5e-20 Score=129.45 Aligned_cols=151 Identities=12% Similarity=0.082 Sum_probs=127.2
Q ss_pred HHHhchhHHHHHHH----------------hHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHH
Q psy17412 38 ERKARQDIADHFKA----------------NGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLP 101 (240)
Q Consensus 38 ~~~~~~~~~~~~~~----------------~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 101 (240)
.....|+++.+++. +|.++...|++++|+..|+++++.+|+++.++..+|.++...|++++|+.
T Consensus 30 al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~ 109 (208)
T 3urz_A 30 TIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALR 109 (208)
T ss_dssp HHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHH
Confidence 45567888889998 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcccHHHHHHHHHHHHHcCC--HHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchh
Q psy17412 102 DCDKALRLDEDNMKAHLYKARAMHSLGQ--REEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVL 179 (240)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~la~~~~~~~~--~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~ 179 (240)
.|+++++++|+++.+++.+|.+++..|+ ...+...+++++...|. ...++.+|.++...|++++|+
T Consensus 110 ~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~a~~~~g~~~~~~~~~~~A~ 177 (208)
T 3urz_A 110 MYEKILQLEADNLAANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKM------------QYARYRDGLSKLFTTRYEKAR 177 (208)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHH------------HHHHHHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCch------------hHHHHHHHHHHHHccCHHHHH
Confidence 9999999999999999999999987764 45567777776543322 123778899999999999999
Q ss_pred hHHHHHhhcChhhHHHHHHHHH
Q psy17412 180 PDCDKALRLDEDNMKAHLYKAR 201 (240)
Q Consensus 180 ~~~~~~l~~~~~~~~~~~~la~ 201 (240)
.+|+++++++|+.. +...+..
T Consensus 178 ~~~~~al~l~P~~~-~~~~l~~ 198 (208)
T 3urz_A 178 NSLQKVILRFPSTE-AQKTLDK 198 (208)
T ss_dssp HHHHHHTTTSCCHH-HHHHHHH
T ss_pred HHHHHHHHhCCCHH-HHHHHHH
Confidence 99999999999743 3333443
No 96
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.84 E-value=2.1e-20 Score=129.41 Aligned_cols=151 Identities=15% Similarity=0.093 Sum_probs=130.4
Q ss_pred cCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhc
Q psy17412 76 VRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQV 155 (240)
Q Consensus 76 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 155 (240)
+|.....+..+|..+...|++++|+..|+++++.+|+++.+++.+|.++...|++++|+..+++++...| ++..
T Consensus 2 ~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~----- 75 (176)
T 2r5s_A 2 NASPDEQLLKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSY----- 75 (176)
T ss_dssp ----CTTHHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHH-----
T ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHH-----
Confidence 3455667889999999999999999999999999999999999999999999999999999999999999 6655
Q ss_pred cCchHHHHHHHHHH-HHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc--HHHHHH
Q psy17412 156 RDSPVLYTNRALTL-LHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTR--RKLVEN 232 (240)
Q Consensus 156 ~~~~~~~~~la~~~-~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~--~~~~~~ 232 (240)
...++.+. ...++...|+..++++++.+|+++.+++.+|.++...|++++|+..|+++++.+|+. +.++..
T Consensus 76 ------~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~ 149 (176)
T 2r5s_A 76 ------KSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKT 149 (176)
T ss_dssp ------HHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHH
T ss_pred ------HHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHH
Confidence 44445443 233455668999999999999999999999999999999999999999999999975 558888
Q ss_pred HHHhhh
Q psy17412 233 YTQAFE 238 (240)
Q Consensus 233 l~~~~~ 238 (240)
++.++.
T Consensus 150 l~~~~~ 155 (176)
T 2r5s_A 150 FMDILS 155 (176)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887764
No 97
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.84 E-value=1.3e-19 Score=140.38 Aligned_cols=143 Identities=16% Similarity=0.139 Sum_probs=119.3
Q ss_pred chhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCC-------hHHHHHHHHHHHHccCcCchHHHHHHHHhcCccc-
Q psy17412 42 RQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDS-------PVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN- 113 (240)
Q Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~-------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~- 113 (240)
.+..+.++..+|.++...|++++|+.++.++++..+.. ..++..+|.++...|++++|+.++++++.+.+..
T Consensus 139 ~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 218 (383)
T 3ulq_A 139 RIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEK 218 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcC
Confidence 34578999999999999999999999999999985543 4588999999999999999999999999875432
Q ss_pred -----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhc
Q psy17412 114 -----MKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRL 188 (240)
Q Consensus 114 -----~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~ 188 (240)
..++.++|.++..+|++++|+.++++++++.+... ..+..+.++.++|.++...|++++|+.+++++++.
T Consensus 219 ~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~-----~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 293 (383)
T 3ulq_A 219 QPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESN-----ILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAY 293 (383)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-----CGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhc-----cchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 35899999999999999999999999999522110 00122445999999999999999999999999887
Q ss_pred C
Q psy17412 189 D 189 (240)
Q Consensus 189 ~ 189 (240)
.
T Consensus 294 ~ 294 (383)
T 3ulq_A 294 S 294 (383)
T ss_dssp H
T ss_pred H
Confidence 3
No 98
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.84 E-value=3.2e-21 Score=129.60 Aligned_cols=107 Identities=14% Similarity=0.127 Sum_probs=58.6
Q ss_pred chhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHH
Q psy17412 42 RQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKA 121 (240)
Q Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la 121 (240)
.|.....++.+|..++..|++++|+..|++++..+|+++.+|..+|.++...|++++|+..|++++.++|+++.+++.+|
T Consensus 17 ~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg 96 (148)
T 2vgx_A 17 SSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAA 96 (148)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHH
T ss_pred CHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 44455555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCch
Q psy17412 122 RAMHSLGQREEAKEYVRQLVEKYPTRR 148 (240)
Q Consensus 122 ~~~~~~~~~~~A~~~~~~a~~~~~~~~ 148 (240)
.++..+|++++|+..|++++++.|+++
T Consensus 97 ~~~~~~g~~~~A~~~~~~al~~~p~~~ 123 (148)
T 2vgx_A 97 ECLLQXGELAEAESGLFLAQELIANXP 123 (148)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHTTCG
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCcCCC
Confidence 555555555555555555555555443
No 99
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.84 E-value=3.2e-20 Score=140.39 Aligned_cols=191 Identities=14% Similarity=0.048 Sum_probs=156.4
Q ss_pred chhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCC------hHHHHHHHHHHHHccC--------------------
Q psy17412 42 RQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDS------PVLYTNRALTLLHLQL-------------------- 95 (240)
Q Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~la~~~~~~~~-------------------- 95 (240)
.+..+..+..+|.++...|++++|+..+++++...+.. ..++..+|.++...|+
T Consensus 79 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 158 (338)
T 3ro2_A 79 QLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNA 158 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHH
Confidence 55678899999999999999999999999999986654 3488999999999999
Q ss_pred cCchHHHHHHHHhcC------cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHH
Q psy17412 96 YDPVLPDCDKALRLD------EDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTL 169 (240)
Q Consensus 96 ~~~A~~~~~~~~~~~------~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 169 (240)
+++|+..+++++... +....++..+|.++...|++++|+..+++++++.+..... +.....+..+|.++
T Consensus 159 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~-----~~~~~~~~~l~~~~ 233 (338)
T 3ro2_A 159 LQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDK-----AAERRAYSNLGNAY 233 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCH-----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCh-----HHHHHHHHHHHHHH
Confidence 999999999988762 4446689999999999999999999999999876553221 11234688999999
Q ss_pred HHhcccCchhhHHHHHhhcChhh------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc------HHHHHHHHHhh
Q psy17412 170 LHLQLYDPVLPDCDKALRLDEDN------MKAHLYKARAMHNLGQREEAKEYIRELVEKYPTR------RKLVENYTQAF 237 (240)
Q Consensus 170 ~~~~~~~~A~~~~~~~l~~~~~~------~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~------~~~~~~l~~~~ 237 (240)
...|++++|+..++++++..+.. ..++..+|.++...|++++|+.++++++...+.. ..++..++.++
T Consensus 234 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~ 313 (338)
T 3ro2_A 234 IFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAY 313 (338)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Confidence 99999999999999998876654 6788899999999999999999999998875543 33555566554
No 100
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.84 E-value=1.6e-19 Score=118.74 Aligned_cols=134 Identities=26% Similarity=0.326 Sum_probs=128.2
Q ss_pred HHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHH
Q psy17412 47 DHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHS 126 (240)
Q Consensus 47 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 126 (240)
.+++.+|..+...|++++|+..+++++...|.+..++..+|.++...|++++|+..+++++...|.++.++..+|.++..
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 81 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChh
Q psy17412 127 LGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDED 191 (240)
Q Consensus 127 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~ 191 (240)
.|++++|+..++++++..|.+... +..+|.++...|++++|...+.++++.+|+
T Consensus 82 ~~~~~~A~~~~~~~~~~~~~~~~~-----------~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 82 QGDYDEAIEYYQKALELDPRSAEA-----------WYNLGNAYYKQGDYDEAIEYYQKALELDPR 135 (136)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHTTTCHHHHHHHHHHHHHHSTT
T ss_pred hcCHHHHHHHHHHHHHhCCCChHH-----------HHHHHHHHHHHccHHHHHHHHHHHHccCCC
Confidence 999999999999999999988777 999999999999999999999999998875
No 101
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.84 E-value=1.1e-19 Score=125.87 Aligned_cols=129 Identities=16% Similarity=0.090 Sum_probs=93.2
Q ss_pred HHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHH-H
Q psy17412 91 LHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALT-L 169 (240)
Q Consensus 91 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~-~ 169 (240)
...|++++|+..+++++..+|.++.++..+|.++...|++++|+..|++++++.|+++.. +..+|.+ +
T Consensus 21 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~-----------~~~la~~l~ 89 (177)
T 2e2e_A 21 ASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAEL-----------YAALATVLY 89 (177)
T ss_dssp C-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHH-----------HHHHHHHHH
T ss_pred hhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHH-----------HHHHHHHHH
Confidence 445677777777777777777777777777777777777777777777777777776665 7777777 6
Q ss_pred HHhccc--CchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHH
Q psy17412 170 LHLQLY--DPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLV 230 (240)
Q Consensus 170 ~~~~~~--~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~ 230 (240)
...|++ ++|+..++++++.+|++..++..+|.++...|++++|+.+|++++..+|+++...
T Consensus 90 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 152 (177)
T 2e2e_A 90 YQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINRT 152 (177)
T ss_dssp HHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHH
T ss_pred HhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHH
Confidence 677777 7777777777777777777777777777777777777777777777777765443
No 102
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.84 E-value=1.7e-19 Score=117.84 Aligned_cols=118 Identities=21% Similarity=0.285 Sum_probs=109.3
Q ss_pred hhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHH
Q psy17412 43 QDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKAR 122 (240)
Q Consensus 43 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 122 (240)
|..+..+..+|..++..|++++|+..|++++..+|+++.++.++|.++...|++++|+..++++++++|+++.+++.+|.
T Consensus 1 p~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKAT 80 (126)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 34678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHcC------CCchHHHHHhccCchHHHHHHHHHHHH
Q psy17412 123 AMHSLGQREEAKEYVRQLVEKY------PTRRKLAIEQVRDSPVLYTNRALTLLH 171 (240)
Q Consensus 123 ~~~~~~~~~~A~~~~~~a~~~~------~~~~~~~~~~~~~~~~~~~~la~~~~~ 171 (240)
++..+|++++|+..++++++++ |++... +..++.+...
T Consensus 81 ~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~-----------~~~l~~~~~~ 124 (126)
T 3upv_A 81 AQIAVKEYASALETLDAARTKDAEVNNGSSAREI-----------DQLYYKASQQ 124 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHH-----------HHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHH-----------HHHHHHHHHh
Confidence 9999999999999999999999 766655 7777766543
No 103
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.84 E-value=2.9e-19 Score=127.32 Aligned_cols=174 Identities=11% Similarity=-0.007 Sum_probs=153.8
Q ss_pred hHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHcc----CcCchHHHHHHHHhcCcccHHHHHH
Q psy17412 44 DIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQ----LYDPVLPDCDKALRLDEDNMKAHLY 119 (240)
Q Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~----~~~~A~~~~~~~~~~~~~~~~~~~~ 119 (240)
.++.+++.+|.++...+++++|+.+|+++.+. .++.+++.+|.+|.. + ++++|+.+|+++.+ +.++.+++.
T Consensus 16 g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~~~a~~~ 90 (212)
T 3rjv_A 16 GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQ--GDGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AGSKSGEIV 90 (212)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--TCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTCHHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCCHHHHHH
Confidence 67889999999999999999999999999875 678999999999998 7 89999999999975 568899999
Q ss_pred HHHHHHH----cCCHHHHHHHHHHHHHcCCC--chHHHHHhccCchHHHHHHHHHHHH----hcccCchhhHHHHHhhcC
Q psy17412 120 KARAMHS----LGQREEAKEYVRQLVEKYPT--RRKLAIEQVRDSPVLYTNRALTLLH----LQLYDPVLPDCDKALRLD 189 (240)
Q Consensus 120 la~~~~~----~~~~~~A~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~l~~~ 189 (240)
+|.++.. .+++++|+.+|+++.+..+. ++.. ++++|.+|.. .+++++|+.+|+++++.
T Consensus 91 Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a-----------~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~- 158 (212)
T 3rjv_A 91 LARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDA-----------QMLLGLIYASGVHGPEDDVKASEYFKGSSSL- 158 (212)
T ss_dssp HHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHH-----------HHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-
T ss_pred HHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHH-----------HHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-
Confidence 9999998 89999999999999998883 3555 9999999999 88999999999999998
Q ss_pred hhhHHHHHHHHHHHHHc-C-----CHHHHHHHHHHHHHhCCCcHHHHHHHHHh
Q psy17412 190 EDNMKAHLYKARAMHNL-G-----QREEAKEYIRELVEKYPTRRKLVENYTQA 236 (240)
Q Consensus 190 ~~~~~~~~~la~~~~~~-g-----~~~~A~~~~~~~~~~~p~~~~~~~~l~~~ 236 (240)
|.++.+++.+|.+|... | ++++|+.+|+++.+.. ++.+...+.++
T Consensus 159 ~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g--~~~A~~~l~~l 209 (212)
T 3rjv_A 159 SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEG--FDTGCEEFDRI 209 (212)
T ss_dssp SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHT--CHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcC--CHHHHHHHHHh
Confidence 66677999999999864 3 8999999999999885 45566666554
No 104
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.84 E-value=1e-19 Score=118.82 Aligned_cols=117 Identities=20% Similarity=0.280 Sum_probs=95.6
Q ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcCh
Q psy17412 111 EDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDE 190 (240)
Q Consensus 111 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~ 190 (240)
|..+..+..+|..++..|++++|+..|+++++++|+++.. +.++|.++...|++++|+..++++++.+|
T Consensus 1 p~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~-----------~~~~a~~~~~~~~~~~A~~~~~~al~~~p 69 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARG-----------YSNRAAALAKLMSFPEAIADCNKAIEKDP 69 (126)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHH-----------HHHHHHHHHHhcCHHHHHHHHHHHHHhCC
Confidence 3456677888888888888888888888888888887766 88888888888888888888888888888
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCcHHHHHHHHHhhh
Q psy17412 191 DNMKAHLYKARAMHNLGQREEAKEYIRELVEKY------PTRRKLVENYTQAFE 238 (240)
Q Consensus 191 ~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~------p~~~~~~~~l~~~~~ 238 (240)
+++.+++.+|.++..+|++++|+..|+++++++ |.++.++..+.++.+
T Consensus 70 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~ 123 (126)
T 3upv_A 70 NFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQ 123 (126)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHH
Confidence 888888888888888888888888888888888 888888877777654
No 105
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.83 E-value=2e-19 Score=128.03 Aligned_cols=145 Identities=9% Similarity=0.004 Sum_probs=122.0
Q ss_pred HHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHH
Q psy17412 45 IADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAM 124 (240)
Q Consensus 45 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 124 (240)
....++.+|..+...|++++|+..|++++ .| ++.++..+|.++...|++++|+..+++++..+|+++.+++.+|.++
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~ 81 (213)
T 1hh8_A 5 EAISLWNEGVLAADKKDWKGALDAFSAVQ--DP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLY 81 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHH
Confidence 45567899999999999999999999995 33 6889999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHHcCCCchHH-----HHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhh
Q psy17412 125 HSLGQREEAKEYVRQLVEKYPTRRKL-----AIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN 192 (240)
Q Consensus 125 ~~~~~~~~A~~~~~~a~~~~~~~~~~-----~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~ 192 (240)
..+|++++|+..++++++..|.+... .....+..+.++.++|.++...|++++|+..++++++.+|++
T Consensus 82 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 82 YQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp HHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred HHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccc
Confidence 99999999999999999999876511 000111223447888888888888888888888888887765
No 106
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.83 E-value=9.9e-20 Score=148.00 Aligned_cols=150 Identities=11% Similarity=0.040 Sum_probs=140.9
Q ss_pred HhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHH
Q psy17412 40 KARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLY 119 (240)
Q Consensus 40 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 119 (240)
...|..+..+..+|.++...|++++|++.|+++++.+|++..++..+|.++...|++++|+..++++++.+|++..++..
T Consensus 17 ~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 96 (568)
T 2vsy_A 17 RHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALW 96 (568)
T ss_dssp ----CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 45677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHh---cccCchhhHHHHHhhcChhhHHHH
Q psy17412 120 KARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHL---QLYDPVLPDCDKALRLDEDNMKAH 196 (240)
Q Consensus 120 la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~---~~~~~A~~~~~~~l~~~~~~~~~~ 196 (240)
+|.++..+|++++|+..++++++.+|++... +.++|.++... |++++|+..++++++.+|.+...+
T Consensus 97 la~~~~~~g~~~~A~~~~~~al~~~p~~~~~-----------~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 165 (568)
T 2vsy_A 97 LGHALEDAGQAEAAAAAYTRAHQLLPEEPYI-----------TAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVGAVEPF 165 (568)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCCCSCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH-----------HHHHHHHHHHhhccccHHHHHHHHHHHHhcCCcccChH
Confidence 9999999999999999999999999998877 99999999999 999999999999999999987777
Q ss_pred HHHH
Q psy17412 197 LYKA 200 (240)
Q Consensus 197 ~~la 200 (240)
..++
T Consensus 166 ~~l~ 169 (568)
T 2vsy_A 166 AFLS 169 (568)
T ss_dssp HHTT
T ss_pred HHhC
Confidence 7666
No 107
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.83 E-value=4.1e-18 Score=126.92 Aligned_cols=201 Identities=9% Similarity=-0.012 Sum_probs=162.8
Q ss_pred HHHhchhHHHHHHHhHhHHHHhC--CHHHHHHHHHHHHHhcCCChHHHHHHHHHH----HHc---cCcCchHHHHHHHHh
Q psy17412 38 ERKARQDIADHFKANGNKAFQSG--QYEAALVQYDKAIEQVRDSPVLYTNRALTL----LHL---QLYDPVLPDCDKALR 108 (240)
Q Consensus 38 ~~~~~~~~~~~~~~~a~~~~~~~--~~~~A~~~~~~a~~~~~~~~~~~~~la~~~----~~~---~~~~~A~~~~~~~~~ 108 (240)
....+|+...+|...|.++...| +++++++.++.++..+|++..+|..++.+. ... +++++++..+.++++
T Consensus 59 ~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~ 138 (306)
T 3dra_A 59 GINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLS 138 (306)
T ss_dssp HHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHH
T ss_pred HHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHH
Confidence 45678888888888888888888 888888888888888888888888888888 666 678888888888888
Q ss_pred cCcccHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHcCCCchHH-----------------------------HHHhccC
Q psy17412 109 LDEDNMKAHLYKARAMHSLGQRE--EAKEYVRQLVEKYPTRRKL-----------------------------AIEQVRD 157 (240)
Q Consensus 109 ~~~~~~~~~~~la~~~~~~~~~~--~A~~~~~~a~~~~~~~~~~-----------------------------~~~~~~~ 157 (240)
.+|.+..+|..++.+....|.++ +++..++++++.+|.+..+ ++...|.
T Consensus 139 ~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~ 218 (306)
T 3dra_A 139 SDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQ 218 (306)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSS
T ss_pred hCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCC
Confidence 88888888888888888888887 8888888888888876554 3444566
Q ss_pred chHHHHHHHHHHHHhcccCchh-hHHHHHhhcC---hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCCCcHHHHHH
Q psy17412 158 SPVLYTNRALTLLHLQLYDPVL-PDCDKALRLD---EDNMKAHLYKARAMHNLGQREEAKEYIRELVE-KYPTRRKLVEN 232 (240)
Q Consensus 158 ~~~~~~~la~~~~~~~~~~~A~-~~~~~~l~~~---~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~-~~p~~~~~~~~ 232 (240)
+..+|..++.++...|+...++ ..+.++++.+ |.++.++..++.++.+.|+.++|++.|+.+.. .+|-....|..
T Consensus 219 n~SaW~y~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~s~~al~~la~~~~~~~~~~~A~~~~~~l~~~~Dpir~~yW~~ 298 (306)
T 3dra_A 219 NPSTWNYLLGIHERFDRSITQLEEFSLQFVDLEKDQVTSSFALETLAKIYTQQKKYNESRTVYDLLKSKYNPIRSNFWDY 298 (306)
T ss_dssp CHHHHHHHHHHHHHTTCCGGGGHHHHHTTEEGGGTEESCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCGGGHHHHHH
T ss_pred CccHHHHHHHHHHhcCCChHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHHhccChHHHHHHHH
Confidence 6677888888888888766544 4666666665 77888899999999999999999999999987 79999999988
Q ss_pred HHHhhh
Q psy17412 233 YTQAFE 238 (240)
Q Consensus 233 l~~~~~ 238 (240)
.++.+.
T Consensus 299 ~~~~l~ 304 (306)
T 3dra_A 299 QISKLT 304 (306)
T ss_dssp HHHTCC
T ss_pred HHhhcc
Confidence 877653
No 108
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.83 E-value=9.7e-21 Score=126.44 Aligned_cols=107 Identities=14% Similarity=0.149 Sum_probs=60.6
Q ss_pred chhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHH
Q psy17412 42 RQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKA 121 (240)
Q Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la 121 (240)
.|.....++.+|..++..|++++|+..|++++..+|+++.+|..+|.++...|++++|+..|++++.++|+++.+++.+|
T Consensus 14 ~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 93 (142)
T 2xcb_A 14 SEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAA 93 (142)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHH
Confidence 44455555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCch
Q psy17412 122 RAMHSLGQREEAKEYVRQLVEKYPTRR 148 (240)
Q Consensus 122 ~~~~~~~~~~~A~~~~~~a~~~~~~~~ 148 (240)
.++..+|++++|+..|++++++.|+++
T Consensus 94 ~~~~~~g~~~~A~~~~~~al~~~p~~~ 120 (142)
T 2xcb_A 94 ECHLQLGDLDGAESGFYSARALAAAQP 120 (142)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHTCG
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCc
Confidence 555555555555555555555555443
No 109
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.83 E-value=1.5e-18 Score=130.48 Aligned_cols=174 Identities=13% Similarity=0.074 Sum_probs=162.2
Q ss_pred hHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHcc-CcCchHHHHHHHHhcCcccHHHHHHHHHHHHHc-C-CH
Q psy17412 54 NKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQ-LYDPVLPDCDKALRLDEDNMKAHLYKARAMHSL-G-QR 130 (240)
Q Consensus 54 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~-~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~-~-~~ 130 (240)
......+..++|++.+.+++..+|++..+|..++.+...+| .+++++..+.+++..+|.+..+|..++.++... + ++
T Consensus 62 ~~~~~~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~ 141 (349)
T 3q7a_A 62 AIAAKEEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDP 141 (349)
T ss_dssp HHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCC
T ss_pred HHHHhCCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCCh
Confidence 33444556679999999999999999999999999999999 599999999999999999999999999999998 8 99
Q ss_pred HHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccC--------chhhHHHHHhhcChhhHHHHHHHHHH
Q psy17412 131 EEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYD--------PVLPDCDKALRLDEDNMKAHLYKARA 202 (240)
Q Consensus 131 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~--------~A~~~~~~~l~~~~~~~~~~~~la~~ 202 (240)
++++..+.++++.+|.+..+ |..++.+....|.++ +++++++++++.+|.+..+|..++.+
T Consensus 142 ~~EL~~~~k~L~~dpkNy~A-----------W~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~l 210 (349)
T 3q7a_A 142 VSEIEYIHGSLLPDPKNYHT-----------WAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYL 210 (349)
T ss_dssp HHHHHHHHHHTSSCTTCHHH-----------HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHH-----------HHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 99999999999999999888 999999999999999 99999999999999999999999999
Q ss_pred HHHcCC-------HHHHHHHHHHHHHhCCCcHHHHHHHHHhhh
Q psy17412 203 MHNLGQ-------REEAKEYIRELVEKYPTRRKLVENYTQAFE 238 (240)
Q Consensus 203 ~~~~g~-------~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 238 (240)
+..+++ ++++++++.+++..+|++..+|..+..++.
T Consensus 211 L~~l~~~~~~~~~~~eELe~~~~aI~~~P~n~SaW~Ylr~Ll~ 253 (349)
T 3q7a_A 211 RVSRPGAETSSRSLQDELIYILKSIHLIPHNVSAWNYLRGFLK 253 (349)
T ss_dssp HTTSTTCCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHhccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 999987 799999999999999999999998877764
No 110
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.83 E-value=2.6e-19 Score=144.66 Aligned_cols=172 Identities=14% Similarity=0.112 Sum_probs=161.1
Q ss_pred HHhCCH-HHHHHHHHHHHHhcCCChHHHHHHHHHHHHccC----------cCchHHHHHHHHhcCcccHHHHHHHHHHHH
Q psy17412 57 FQSGQY-EAALVQYDKAIEQVRDSPVLYTNRALTLLHLQL----------YDPVLPDCDKALRLDEDNMKAHLYKARAMH 125 (240)
Q Consensus 57 ~~~~~~-~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~----------~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 125 (240)
...|++ ++|++.+++++..+|++..+|..++.+....|+ ++++++.++++++.+|++..+|..++.++.
T Consensus 39 ~~~~~~~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~ 118 (567)
T 1dce_A 39 RQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLS 118 (567)
T ss_dssp HHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 344544 678999999999999999999999999999998 999999999999999999999999999999
Q ss_pred HcC--CHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhc-ccCchhhHHHHHhhcChhhHHHHHHHHHH
Q psy17412 126 SLG--QREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQ-LYDPVLPDCDKALRLDEDNMKAHLYKARA 202 (240)
Q Consensus 126 ~~~--~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-~~~~A~~~~~~~l~~~~~~~~~~~~la~~ 202 (240)
.++ ++++++..++++++.+|.+..+ |..++.+....| .++++++++.++++.+|.+..+|..++.+
T Consensus 119 ~l~~~~~~~el~~~~k~l~~d~~N~~a-----------W~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~l 187 (567)
T 1dce_A 119 RLPEPNWARELELCARFLEADERNFHC-----------WDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCL 187 (567)
T ss_dssp TCSSCCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHH
T ss_pred HcccccHHHHHHHHHHHHhhccccccH-----------HHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHH
Confidence 999 7799999999999999999888 999999999999 89999999999999999999999999999
Q ss_pred HHHc--------------CCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhhc
Q psy17412 203 MHNL--------------GQREEAKEYIRELVEKYPTRRKLVENYTQAFEQ 239 (240)
Q Consensus 203 ~~~~--------------g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 239 (240)
+..+ +.++++++++.+++..+|++..+|..++.++.+
T Consensus 188 l~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~ll~~ 238 (567)
T 1dce_A 188 LPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGR 238 (567)
T ss_dssp HHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHSC
T ss_pred HHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHhc
Confidence 8885 668999999999999999999999999888754
No 111
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.83 E-value=4.3e-19 Score=121.16 Aligned_cols=134 Identities=22% Similarity=0.349 Sum_probs=122.9
Q ss_pred hHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHH
Q psy17412 44 DIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARA 123 (240)
Q Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 123 (240)
..+..+..+|..++..|++++|+..|++++..+|.+..++..+|.++...|++++|+..+++++..+|.++.+++.+|.+
T Consensus 11 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~ 90 (166)
T 1a17_A 11 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAAS 90 (166)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHH--HHHHHHHHHhcccCchhhHHHHHhhc
Q psy17412 124 MHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLY--TNRALTLLHLQLYDPVLPDCDKALRL 188 (240)
Q Consensus 124 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~--~~la~~~~~~~~~~~A~~~~~~~l~~ 188 (240)
+..+|++++|+..++++++..|.+... + ..++..+...|++++|+..+.++...
T Consensus 91 ~~~~~~~~~A~~~~~~a~~~~p~~~~~-----------~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 91 NMALGKFRAALRDYETVVKVKPHDKDA-----------KMKYQECNKIVKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHHHHHhCCCCHHH-----------HHHHHHHHHHHHHHHHHHHHHcccchHHH
Confidence 999999999999999999999998766 5 44455578889999999888877554
No 112
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.82 E-value=1.6e-18 Score=129.47 Aligned_cols=176 Identities=12% Similarity=0.089 Sum_probs=143.6
Q ss_pred hHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChH------HHHHHHHHHHHccCcCchHHHHHHHHhcCccc----
Q psy17412 44 DIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPV------LYTNRALTLLHLQLYDPVLPDCDKALRLDEDN---- 113 (240)
Q Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~------~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~---- 113 (240)
.....+...+..++..|++++|+..+++++...+..+. .+..+|.++...|++++|+.++++++...+..
T Consensus 73 ~~~~~l~~~i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~ 152 (293)
T 3u3w_A 73 ERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVY 152 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTT
T ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHH
Confidence 34455666788899999999999999999998776544 34458899998999999999999999864322
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChh
Q psy17412 114 --MKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDED 191 (240)
Q Consensus 114 --~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~ 191 (240)
..++..+|.++..+|++++|+.+++++++.....+ ...+..+.++.++|.+|...|++++|+.+++++++..+.
T Consensus 153 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~----~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~ 228 (293)
T 3u3w_A 153 QNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALH----DNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcc----cchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 44799999999999999999999999996432110 001122456999999999999999999999999988765
Q ss_pred h------HHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhC
Q psy17412 192 N------MKAHLYKARAMHNLG-QREEAKEYIRELVEKY 223 (240)
Q Consensus 192 ~------~~~~~~la~~~~~~g-~~~~A~~~~~~~~~~~ 223 (240)
. ..++..+|.++..+| ++++|+.+|++++.+.
T Consensus 229 ~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 229 INSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp TTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 4 789999999999999 5799999999999754
No 113
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.82 E-value=6e-19 Score=125.54 Aligned_cols=134 Identities=13% Similarity=0.086 Sum_probs=123.7
Q ss_pred HHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchH
Q psy17412 81 VLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPV 160 (240)
Q Consensus 81 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~ 160 (240)
..++.+|.++...|++++|+..|++++ .| ++.+++.+|.++...|++++|+..++++++.+|++...
T Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~---------- 73 (213)
T 1hh8_A 7 ISLWNEGVLAADKKDWKGALDAFSAVQ--DP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVA---------- 73 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH----------
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHH----------
Confidence 457789999999999999999999996 33 67899999999999999999999999999999998877
Q ss_pred HHHHHHHHHHHhcccCchhhHHHHHhhcChhhH----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q psy17412 161 LYTNRALTLLHLQLYDPVLPDCDKALRLDEDNM----------------KAHLYKARAMHNLGQREEAKEYIRELVEKYP 224 (240)
Q Consensus 161 ~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~----------------~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p 224 (240)
+.++|.++...|++++|+..++++++..|.+. .++..+|.++..+|++++|+.+|++++..+|
T Consensus 74 -~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p 152 (213)
T 1hh8_A 74 -YFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKS 152 (213)
T ss_dssp -HHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCC
T ss_pred -HHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCc
Confidence 99999999999999999999999999776654 9999999999999999999999999999999
Q ss_pred CcHH
Q psy17412 225 TRRK 228 (240)
Q Consensus 225 ~~~~ 228 (240)
++..
T Consensus 153 ~~~~ 156 (213)
T 1hh8_A 153 EPRH 156 (213)
T ss_dssp SGGG
T ss_pred cccc
Confidence 7643
No 114
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.82 E-value=3.6e-18 Score=127.94 Aligned_cols=172 Identities=13% Similarity=0.114 Sum_probs=158.1
Q ss_pred HHHhCCHH-HHHHHHHHHHHhcCCChHHHHHHHHHHHHccC----------cCchHHHHHHHHhcCcccHHHHHHHHHHH
Q psy17412 56 AFQSGQYE-AALVQYDKAIEQVRDSPVLYTNRALTLLHLQL----------YDPVLPDCDKALRLDEDNMKAHLYKARAM 124 (240)
Q Consensus 56 ~~~~~~~~-~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~----------~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 124 (240)
....|++. +|+..+.+++..+|++..+|..++.+....+. +++++..+..++..+|.+..+|..++.++
T Consensus 39 ~~~~~e~s~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL 118 (331)
T 3dss_A 39 KRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLL 118 (331)
T ss_dssp HHHTTCCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 34567765 79999999999999999999999999988876 68999999999999999999999999999
Q ss_pred HHcCC--HHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcc-cCchhhHHHHHhhcChhhHHHHHHHHH
Q psy17412 125 HSLGQ--REEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQL-YDPVLPDCDKALRLDEDNMKAHLYKAR 201 (240)
Q Consensus 125 ~~~~~--~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-~~~A~~~~~~~l~~~~~~~~~~~~la~ 201 (240)
...++ +++++..+.++++.+|.+..+ |...+.+....|. ++++++++.++++.+|.+..+|..++.
T Consensus 119 ~~l~~~~~~~EL~~~~k~l~~dprNy~A-----------W~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ 187 (331)
T 3dss_A 119 SRLPEPNWARELELCARFLEADERNFHC-----------WDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSC 187 (331)
T ss_dssp HHCSSCCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHH
T ss_pred hccCcccHHHHHHHHHHHHHhCCCCHHH-----------HHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 99994 899999999999999999888 9999999999998 489999999999999999999999999
Q ss_pred HHHHc--------------CCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhh
Q psy17412 202 AMHNL--------------GQREEAKEYIRELVEKYPTRRKLVENYTQAFE 238 (240)
Q Consensus 202 ~~~~~--------------g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 238 (240)
++..+ +.++++++++.+++..+|++..+|..+.-++.
T Consensus 188 ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ll~ 238 (331)
T 3dss_A 188 LLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLG 238 (331)
T ss_dssp HHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 99887 56899999999999999999999987766553
No 115
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.81 E-value=6e-19 Score=120.59 Aligned_cols=110 Identities=22% Similarity=0.213 Sum_probs=105.8
Q ss_pred hchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHH
Q psy17412 41 ARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYK 120 (240)
Q Consensus 41 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 120 (240)
..+..+..++.+|..++..|+|++|+..|++++..+|+++.++..+|.++...|++++|+..|++++.++|+++.+++.+
T Consensus 6 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 85 (164)
T 3sz7_A 6 APTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRL 85 (164)
T ss_dssp SCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCchHH
Q psy17412 121 ARAMHSLGQREEAKEYVRQLVEKYPTRRKL 150 (240)
Q Consensus 121 a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 150 (240)
|.++..+|++++|+.+|+++++++|++...
T Consensus 86 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 115 (164)
T 3sz7_A 86 GLARFDMADYKGAKEAYEKGIEAEGNGGSD 115 (164)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHSSSCCH
T ss_pred HHHHHHccCHHHHHHHHHHHHHhCCCchHH
Confidence 999999999999999999999999998775
No 116
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.81 E-value=1.7e-18 Score=113.22 Aligned_cols=125 Identities=28% Similarity=0.369 Sum_probs=119.1
Q ss_pred hchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHH
Q psy17412 41 ARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYK 120 (240)
Q Consensus 41 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 120 (240)
..+..+..+..+|..+...|++++|+..|++++...|+++.++..+|.++...|++++|+..+++++...|+++.+++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 86 (131)
T 2vyi_A 7 EDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRM 86 (131)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHH
Confidence 45667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccC
Q psy17412 121 ARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYD 176 (240)
Q Consensus 121 a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 176 (240)
|.++...|++++|+..++++++..|++... +..+|.++...|+++
T Consensus 87 ~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~-----------~~~l~~~~~~~~~~~ 131 (131)
T 2vyi_A 87 GLALSSLNKHVEAVAYYKKALELDPDNETY-----------KSNLKIAELKLREAP 131 (131)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHH-----------HHHHHHHHHHHTTCC
T ss_pred HHHHHHhCCHHHHHHHHHHHHhcCccchHH-----------HHHHHHHHHHHhcCC
Confidence 999999999999999999999999998877 999999999998864
No 117
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.81 E-value=9.4e-18 Score=125.70 Aligned_cols=186 Identities=17% Similarity=0.137 Sum_probs=166.6
Q ss_pred HHHhchhHHHHHHHhHhHHHHhCC----------HHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccC--cCchHHHHHH
Q psy17412 38 ERKARQDIADHFKANGNKAFQSGQ----------YEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQL--YDPVLPDCDK 105 (240)
Q Consensus 38 ~~~~~~~~~~~~~~~a~~~~~~~~----------~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~--~~~A~~~~~~ 105 (240)
....+|....+|...+.+....+. +++++.++..++..+|.+..+|..++.+....++ +++++..+.+
T Consensus 56 ~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k 135 (331)
T 3dss_A 56 ILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCAR 135 (331)
T ss_dssp HHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHH
T ss_pred HHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHH
Confidence 455789999999999999988776 7899999999999999999999999999999995 7899999999
Q ss_pred HHhcCcccHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHh------------
Q psy17412 106 ALRLDEDNMKAHLYKARAMHSLGQ-REEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHL------------ 172 (240)
Q Consensus 106 ~~~~~~~~~~~~~~la~~~~~~~~-~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~------------ 172 (240)
+++.+|.+..+|...+.+....|. +++++.++.++++.+|.+..+ |..++.++...
T Consensus 136 ~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SA-----------W~~R~~ll~~l~~~~~~~~~~~~ 204 (331)
T 3dss_A 136 FLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSS-----------WHYRSCLLPQLHPQPDSGPQGRL 204 (331)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHH-----------HHHHHHHHHHHSCCC------CC
T ss_pred HHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHH-----------HHHHHHHHHHhhhcccccccccc
Confidence 999999999999999999999998 699999999999999999888 99999998887
Q ss_pred --cccCchhhHHHHHhhcChhhHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q psy17412 173 --QLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNL-----------GQREEAKEYIRELVEKYPTRRKLVENYT 234 (240)
Q Consensus 173 --~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~-----------g~~~~A~~~~~~~~~~~p~~~~~~~~l~ 234 (240)
+.++++++++.+++..+|++..+|+.+.-++... +.++++++.+.++++..|++.-....++
T Consensus 205 ~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ll~~~~~~~~~~~~~~~~l~~el~~~~elle~~pd~~w~l~~~~ 279 (331)
T 3dss_A 205 PENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGAGSGRCELSVEKSTVLQSELESCKELQELEPENKWCLLTII 279 (331)
T ss_dssp CHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHSSSCGGGCCHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHhhCcccchHHHHHH
Confidence 6688999999999999999999998666665554 4588999999999999999865544443
No 118
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.81 E-value=2e-19 Score=126.73 Aligned_cols=158 Identities=14% Similarity=0.054 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHH-----HHhc
Q psy17412 81 VLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLA-----IEQV 155 (240)
Q Consensus 81 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~-----~~~~ 155 (240)
......+.+....|+++++.+.+.......+.....+..+|..++..|++++|+..|++++++.|.++... ....
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 84 (198)
T 2fbn_A 5 HHHHHHSSGRENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKK 84 (198)
T ss_dssp -----------------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHH
T ss_pred ccccchhhhhhhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 34445667777889999999988877777777888999999999999999999999999999998876110 0000
Q ss_pred cCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q psy17412 156 RDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQ 235 (240)
Q Consensus 156 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~ 235 (240)
.....++.++|.++...|++++|+.+++++++.+|++..+++.+|.++..+|++++|+.+|++++.++|+++.++..++.
T Consensus 85 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 164 (198)
T 2fbn_A 85 NIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYEL 164 (198)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHH
Confidence 00124599999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hhh
Q psy17412 236 AFE 238 (240)
Q Consensus 236 ~~~ 238 (240)
++.
T Consensus 165 ~~~ 167 (198)
T 2fbn_A 165 CVN 167 (198)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 119
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.81 E-value=2.3e-18 Score=133.12 Aligned_cols=170 Identities=14% Similarity=0.071 Sum_probs=141.5
Q ss_pred chhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCC-------hHHHHHHHHHHHHccCcCchHHHHHHHHhcCc---
Q psy17412 42 RQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDS-------PVLYTNRALTLLHLQLYDPVLPDCDKALRLDE--- 111 (240)
Q Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~-------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~--- 111 (240)
.+..+.++..+|.++...|++++|+.++.++++..+.. ..++..+|.++...|++++|++++++++.+.+
T Consensus 137 ~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~ 216 (378)
T 3q15_A 137 DIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQ 216 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcC
Confidence 34578899999999999999999999999999986532 45788999999999999999999999998643
Q ss_pred ---ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----cCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHH
Q psy17412 112 ---DNMKAHLYKARAMHSLGQREEAKEYVRQLVE-----KYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCD 183 (240)
Q Consensus 112 ---~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~-----~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 183 (240)
....++.++|.++..+|++++|+.+++++++ .+|.. +.++.++|.++...|++++|+.+++
T Consensus 217 ~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~-----------~~~~~~la~~~~~~g~~~~A~~~~~ 285 (378)
T 3q15_A 217 NDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLL-----------PKVLFGLSWTLCKAGQTQKAFQFIE 285 (378)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGH-----------HHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhH-----------HHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 2356889999999999999999999999999 44444 3449999999999999999999999
Q ss_pred HHhhcChh-----------------------------------------hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q psy17412 184 KALRLDED-----------------------------------------NMKAHLYKARAMHNLGQREEAKEYIRELVEK 222 (240)
Q Consensus 184 ~~l~~~~~-----------------------------------------~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 222 (240)
++++..+. ....+..+|.++...|++++|..+|+++++.
T Consensus 286 ~al~~~~~~~~~~~~~~~~~l~~ly~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~~ 365 (378)
T 3q15_A 286 EGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDLLSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKA 365 (378)
T ss_dssp HHHHHCCTTCCSCHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 99876321 1234556788888888888888888887765
No 120
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.81 E-value=1.3e-18 Score=118.80 Aligned_cols=132 Identities=14% Similarity=0.046 Sum_probs=122.6
Q ss_pred hHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCch
Q psy17412 80 PVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSP 159 (240)
Q Consensus 80 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~ 159 (240)
+..+..+|.++...|++++|+..+++++...|.+..++..+|.++...|++++|+..++++++..|.+...
T Consensus 13 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~--------- 83 (166)
T 1a17_A 13 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKG--------- 83 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH---------
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHH---------
Confidence 56788999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred HHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHH--HHHHHcCCHHHHHHHHHHHHHh
Q psy17412 160 VLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKA--RAMHNLGQREEAKEYIRELVEK 222 (240)
Q Consensus 160 ~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la--~~~~~~g~~~~A~~~~~~~~~~ 222 (240)
+..+|.++...|++++|+..++++++.+|++..++..++ ..+...|++++|+..+.++...
T Consensus 84 --~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 84 --YYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp --HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHHH
Confidence 999999999999999999999999999999988885544 4488899999999999987654
No 121
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.81 E-value=1.6e-19 Score=125.00 Aligned_cols=132 Identities=13% Similarity=0.076 Sum_probs=117.9
Q ss_pred hHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHH-HHHcCCH--
Q psy17412 54 NKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARA-MHSLGQR-- 130 (240)
Q Consensus 54 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~-~~~~~~~-- 130 (240)
..+...|++++|+..+++++..+|+++.++..+|.++...|++++|+..|++++..+|+++.++..+|.+ +...|++
T Consensus 18 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~ 97 (177)
T 2e2e_A 18 HQFASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMT 97 (177)
T ss_dssp CCCC-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCC
T ss_pred hhhhhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcch
Confidence 3456788999999999999999999999999999999999999999999999999999999999999999 8899998
Q ss_pred HHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHH
Q psy17412 131 EEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAH 196 (240)
Q Consensus 131 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~ 196 (240)
++|+..++++++.+|++... +..+|.++...|++++|+..++++++.+|++....
T Consensus 98 ~~A~~~~~~al~~~p~~~~~-----------~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 152 (177)
T 2e2e_A 98 AQTRAMIDKALALDSNEITA-----------LMLLASDAFMQANYAQAIELWQKVMDLNSPRINRT 152 (177)
T ss_dssp HHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHH
T ss_pred HHHHHHHHHHHHhCCCcHHH-----------HHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHH
Confidence 99999999999999998877 99999999999999999999999999999875544
No 122
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.81 E-value=3.1e-20 Score=130.97 Aligned_cols=131 Identities=21% Similarity=0.229 Sum_probs=92.2
Q ss_pred HHHhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCCh----------------HHHHHHHHHHHHccCcCchHH
Q psy17412 38 ERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSP----------------VLYTNRALTLLHLQLYDPVLP 101 (240)
Q Consensus 38 ~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~----------------~~~~~la~~~~~~~~~~~A~~ 101 (240)
.....+..+..+..+|..++..|+|++|+..|++++...|.++ .++.++|.++...|++++|+.
T Consensus 30 ~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 109 (198)
T 2fbn_A 30 TDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAID 109 (198)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 3445566778888889999999999999999999998888776 566666666666666666666
Q ss_pred HHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchh
Q psy17412 102 DCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVL 179 (240)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~ 179 (240)
++++++..+|+++.+++.+|.++..+|++++|+..|++++++.|++... +..++.++...++..++.
T Consensus 110 ~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~-----------~~~l~~~~~~~~~~~~~~ 176 (198)
T 2fbn_A 110 HASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDI-----------RNSYELCVNKLKEARKKD 176 (198)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHH-----------HHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHH-----------HHHHHHHHHHHHHHHHHH
Confidence 6666666666666666666666666666666666666666666666555 666666666666555544
No 123
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.80 E-value=1.7e-18 Score=113.16 Aligned_cols=104 Identities=24% Similarity=0.352 Sum_probs=97.5
Q ss_pred hhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCccc-------HH
Q psy17412 43 QDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN-------MK 115 (240)
Q Consensus 43 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-------~~ 115 (240)
++.+.++..+|..++..|+|++|+..|+++++.+|+++.++.++|.+|..+|++++|+..++++++++|++ ..
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~ 84 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAK 84 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHH
Confidence 35677889999999999999999999999999999999999999999999999999999999999998765 35
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q psy17412 116 AHLYKARAMHSLGQREEAKEYVRQLVEKYPT 146 (240)
Q Consensus 116 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~ 146 (240)
++..+|.++..+|++++|+..|++++...|+
T Consensus 85 ~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~ 115 (127)
T 4gcn_A 85 AMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD 115 (127)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC
Confidence 8899999999999999999999999999886
No 124
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.80 E-value=1.5e-18 Score=113.43 Aligned_cols=112 Identities=17% Similarity=0.226 Sum_probs=83.5
Q ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChh
Q psy17412 112 DNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDED 191 (240)
Q Consensus 112 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~ 191 (240)
+.+.++..+|..++..|+|++|+.+|+++++++|++... +.++|.++..+|++++|+..++++++++|+
T Consensus 6 d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~-----------~~nlg~~~~~~~~~~~A~~~~~~al~~~~~ 74 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITF-----------YNNKAAVYFEEKKFAECVQFCEKAVEVGRE 74 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH-----------HHhHHHHHHHhhhHHHHHHHHHHHHHhCcc
Confidence 345566777777777777777777777777777776666 777777777777777777777777777665
Q ss_pred h-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q psy17412 192 N-------MKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQ 235 (240)
Q Consensus 192 ~-------~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~ 235 (240)
+ ..++..+|.++..+|++++|+.+|++++...|+ ++....+..
T Consensus 75 ~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~~ 124 (127)
T 4gcn_A 75 TRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKVKE 124 (127)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHHHH
Confidence 4 356788888899999999999999999988774 555544443
No 125
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.80 E-value=9.7e-19 Score=119.28 Aligned_cols=126 Identities=19% Similarity=0.246 Sum_probs=113.3
Q ss_pred chhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHh------------------cCCChHHHHHHHHHHHHccCcCchHHHH
Q psy17412 42 RQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQ------------------VRDSPVLYTNRALTLLHLQLYDPVLPDC 103 (240)
Q Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~------------------~~~~~~~~~~la~~~~~~~~~~~A~~~~ 103 (240)
....+..+...|..++..|+|++|+..|.+++.. +|....++.++|.++..+|++++|+..+
T Consensus 7 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~ 86 (162)
T 3rkv_A 7 KLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETS 86 (162)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 3456888999999999999999999999999999 7777889999999999999999999999
Q ss_pred HHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCch-HHHHHhccCchHHHHHHHHHHHHhcccCch
Q psy17412 104 DKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRR-KLAIEQVRDSPVLYTNRALTLLHLQLYDPV 178 (240)
Q Consensus 104 ~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 178 (240)
++++.++|+++.+++.+|.++..+|++++|+..|+++++++|+++ .. ...++.+....++..+.
T Consensus 87 ~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~-----------~~~l~~~~~~~~~~~~~ 151 (162)
T 3rkv_A 87 SEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVV-----------AREMKIVTERRAEKKAD 151 (162)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHH-----------HHHHHHHHHHHHHHTTS
T ss_pred HHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHH-----------HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999987 44 66777777666555443
No 126
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.80 E-value=1.7e-18 Score=113.70 Aligned_cols=122 Identities=23% Similarity=0.364 Sum_probs=115.9
Q ss_pred chhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHH
Q psy17412 42 RQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKA 121 (240)
Q Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la 121 (240)
.+.....++.+|..+...|++++|+..|++++..+|++..++..+|.++...|++++|+..+++++...|.++.+++.+|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la 91 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKA 91 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcc
Q psy17412 122 RAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQL 174 (240)
Q Consensus 122 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~ 174 (240)
.++...|++++|+..++++++..|.+... +..++.++...|+
T Consensus 92 ~~~~~~~~~~~A~~~~~~~~~~~p~~~~~-----------~~~l~~~~~~~~~ 133 (133)
T 2lni_A 92 AALEAMKDYTKAMDVYQKALDLDSSCKEA-----------ADGYQRCMMAQYN 133 (133)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCGGGTHH-----------HHHHHHHHHHHTC
T ss_pred HHHHHHhhHHHHHHHHHHHHHhCCCchHH-----------HHHHHHHHHHhcC
Confidence 99999999999999999999999998777 9999999987764
No 127
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.80 E-value=1.5e-18 Score=113.95 Aligned_cols=121 Identities=20% Similarity=0.162 Sum_probs=90.1
Q ss_pred CCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhcc
Q psy17412 77 RDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVR 156 (240)
Q Consensus 77 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 156 (240)
|.....+..+|.++...|++++|+..+++++...|.+..++..+|.++...|++++|+..++++++..|.+...
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~------ 86 (133)
T 2lni_A 13 PDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKG------ 86 (133)
T ss_dssp SCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHH------
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHH------
Confidence 34466777777777777777777777777777777777777777777777777777777777777777776665
Q ss_pred CchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCC
Q psy17412 157 DSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQ 208 (240)
Q Consensus 157 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~ 208 (240)
+..+|.++...|++++|+..++++++.+|.+..++..++.++..+|+
T Consensus 87 -----~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 87 -----YTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp -----HHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred -----HHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhcC
Confidence 77777777777777777777777777777777777777777766653
No 128
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.79 E-value=1e-17 Score=135.12 Aligned_cols=165 Identities=13% Similarity=0.026 Sum_probs=150.5
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHH-------ccCcC-------chHHHHHHHHh-cCcccHHHHHHHHHHHHHc
Q psy17412 63 EAALVQYDKAIEQVRDSPVLYTNRALTLLH-------LQLYD-------PVLPDCDKALR-LDEDNMKAHLYKARAMHSL 127 (240)
Q Consensus 63 ~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-------~~~~~-------~A~~~~~~~~~-~~~~~~~~~~~la~~~~~~ 127 (240)
..++..|++++..+|.++.+|..+|..+.. .|+++ +|...|+++++ ..|++..+|..+|.++...
T Consensus 255 ~~a~~~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~ 334 (530)
T 2ooe_A 255 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESR 334 (530)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhc
Confidence 478899999999999999999999999986 79987 99999999997 8999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCch-HHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHH-HHH
Q psy17412 128 GQREEAKEYVRQLVEKYPTRR-KLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARA-MHN 205 (240)
Q Consensus 128 ~~~~~A~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~-~~~ 205 (240)
|++++|...|++++++.|.++ .. |..+|.++.+.|++++|+..|.++++..|.....+...+.+ +..
T Consensus 335 g~~~~A~~~~~~al~~~p~~~~~~-----------~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~ 403 (530)
T 2ooe_A 335 MKYEKVHSIYNRLLAIEDIDPTLV-----------YIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYC 403 (530)
T ss_dssp TCHHHHHHHHHHHHHSSSSCHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCccccCchHH-----------HHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHH
Confidence 999999999999999999874 35 99999999999999999999999999988877777766665 346
Q ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhh
Q psy17412 206 LGQREEAKEYIRELVEKYPTRRKLVENYTQAFE 238 (240)
Q Consensus 206 ~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 238 (240)
.|++++|...|+++++.+|+++.+|..++.++.
T Consensus 404 ~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~ 436 (530)
T 2ooe_A 404 SKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 436 (530)
T ss_dssp TCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred cCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999987754
No 129
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.79 E-value=1.1e-18 Score=116.20 Aligned_cols=106 Identities=25% Similarity=0.299 Sum_probs=100.3
Q ss_pred HHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCC-------ChH-----HHHHHHHHHHHccCcCchHHHHHHHHhc---
Q psy17412 45 IADHFKANGNKAFQSGQYEAALVQYDKAIEQVRD-------SPV-----LYTNRALTLLHLQLYDPVLPDCDKALRL--- 109 (240)
Q Consensus 45 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-------~~~-----~~~~la~~~~~~~~~~~A~~~~~~~~~~--- 109 (240)
.+..+...|..++..|+|++|+..|+++++.+|+ +.. +|.++|.++..+|++++|+..+++++++
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 5778899999999999999999999999999999 433 9999999999999999999999999999
Q ss_pred ----CcccHHHH----HHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHH
Q psy17412 110 ----DEDNMKAH----LYKARAMHSLGQREEAKEYVRQLVEKYPTRRKL 150 (240)
Q Consensus 110 ----~~~~~~~~----~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 150 (240)
+|++..+| +++|.++..+|++++|+..|++++++.|++...
T Consensus 90 ~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~ 138 (159)
T 2hr2_A 90 RGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGE 138 (159)
T ss_dssp HCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSC
T ss_pred cccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHH
Confidence 99999999 999999999999999999999999999987655
No 130
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.79 E-value=2.2e-18 Score=117.74 Aligned_cols=111 Identities=14% Similarity=0.135 Sum_probs=70.0
Q ss_pred ChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCc
Q psy17412 79 SPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDS 158 (240)
Q Consensus 79 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 158 (240)
.+..+..+|.+++..|++++|+..|++++.++|+++.+++.+|.++..+|++++|+..++++++++|++...
T Consensus 10 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~-------- 81 (164)
T 3sz7_A 10 ESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKA-------- 81 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--------
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHH--------
Confidence 345566666666666666666666666666666666666666666666666666666666666666665555
Q ss_pred hHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHH
Q psy17412 159 PVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKA 200 (240)
Q Consensus 159 ~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la 200 (240)
++.+|.++...|++++|+..|+++++++|++...+...+
T Consensus 82 ---~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ 120 (164)
T 3sz7_A 82 ---WSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRG 120 (164)
T ss_dssp ---HHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHH
T ss_pred ---HHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 666666666666666666666666666666655444444
No 131
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.79 E-value=5.4e-20 Score=145.53 Aligned_cols=89 Identities=18% Similarity=0.169 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhH
Q psy17412 114 MKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNM 193 (240)
Q Consensus 114 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~ 193 (240)
..++.++|.++..+|++++|+.+++++++++|++... ++++|.++..+|++++|+..|+++++++|++.
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a-----------~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~ 385 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKG-----------LYRRGEAQLLMNEFESAKGDFEKVLEVNPQNK 385 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHH-----------HHHHHHHHHHTTCHHHHHHHHHHHHTTC----
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHH-----------HHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 3455555555555555555555555555555554444 55555555555555555555555555555555
Q ss_pred HHHHHHHHHHHHcCCHHHHH
Q psy17412 194 KAHLYKARAMHNLGQREEAK 213 (240)
Q Consensus 194 ~~~~~la~~~~~~g~~~~A~ 213 (240)
.++..++.++..+|++++|.
T Consensus 386 ~a~~~l~~~~~~~~~~~~a~ 405 (457)
T 1kt0_A 386 AARLQISMCQKKAKEHNERD 405 (457)
T ss_dssp CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 55555555555555555444
No 132
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.78 E-value=8.1e-19 Score=128.07 Aligned_cols=186 Identities=11% Similarity=0.030 Sum_probs=161.7
Q ss_pred HHHhchhHHHHHHHh-------HhHHHHhCCHHHHHHHHHHHHHhcCCChHH---------------------HHHHHHH
Q psy17412 38 ERKARQDIADHFKAN-------GNKAFQSGQYEAALVQYDKAIEQVRDSPVL---------------------YTNRALT 89 (240)
Q Consensus 38 ~~~~~~~~~~~~~~~-------a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~---------------------~~~la~~ 89 (240)
....+|+.+++|..+ +.++...++..+++..+++.+.+.|..... ...++.+
T Consensus 32 a~~~dP~~~Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~~l~l~p~~l~a~~~~~g~y~~~~~~v~~r~dl~LayA~~ 111 (282)
T 4f3v_A 32 ITNYDESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMSTLNARIAIGGLYGDITYPVTSPLAITMGFAAC 111 (282)
T ss_dssp HHHHCTTCHHHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHHTTTCCGGGGCCEEECCTTTCCCEEECSSHHHHHHHHHHH
T ss_pred HHHhChhhhHHHHhHHHccCCcHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhhccCCcccccccccCCHhHHHHHHHHH
Confidence 566789999999999 899999999999999999999987765433 3447889
Q ss_pred HHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHH
Q psy17412 90 LLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTL 169 (240)
Q Consensus 90 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 169 (240)
+...|++++|.+.|..++...|.+. +.+.+|.++++.++|++|+..++.+....+.. . ...+++.+|.++
T Consensus 112 L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~-~--------~~~a~~~LG~al 181 (282)
T 4f3v_A 112 EAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKF-L--------AGAAGVAHGVAA 181 (282)
T ss_dssp HHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHH-H--------HHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcc-c--------HHHHHHHHHHHH
Confidence 9999999999999999999999988 99999999999999999999998776643221 0 023499999999
Q ss_pred HHhcccCchhhHHHHHhhcC--hh-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q psy17412 170 LHLQLYDPVLPDCDKALRLD--ED-NMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYT 234 (240)
Q Consensus 170 ~~~~~~~~A~~~~~~~l~~~--~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~ 234 (240)
..+|++++|+.+|++++.-. |. .+++++.+|.++..+|+.++|...|++++..+|+ +.++..+.
T Consensus 182 ~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~~aL~ 248 (282)
T 4f3v_A 182 ANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVAAALK 248 (282)
T ss_dssp HHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHHHHHh
Confidence 99999999999999998654 55 6789999999999999999999999999999999 88777665
No 133
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.78 E-value=1.6e-18 Score=113.31 Aligned_cols=122 Identities=20% Similarity=0.157 Sum_probs=79.3
Q ss_pred CCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhcc
Q psy17412 77 RDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVR 156 (240)
Q Consensus 77 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 156 (240)
|..+..+..+|.++...|++++|+..+++++...|+++.++..+|.++...|++++|+..++++++..|++...
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~------ 82 (131)
T 2vyi_A 9 SAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKA------ 82 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH------
T ss_pred hhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHH------
Confidence 34455666666666666666666666666666666666666666666666666666666666666666665555
Q ss_pred CchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCH
Q psy17412 157 DSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQR 209 (240)
Q Consensus 157 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~ 209 (240)
+..+|.++...|++++|+..++++++.+|++..++..++.++..+|++
T Consensus 83 -----~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 83 -----YGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp -----HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTTC
T ss_pred -----HHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhcC
Confidence 666666666666666666666666666666666666666666666553
No 134
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.78 E-value=5.8e-18 Score=120.54 Aligned_cols=157 Identities=15% Similarity=0.008 Sum_probs=140.4
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcC----CHHHHHHHHH
Q psy17412 63 EAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLG----QREEAKEYVR 138 (240)
Q Consensus 63 ~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~----~~~~A~~~~~ 138 (240)
.+|+..|+++.+. .++.+++.+|.+|...+++++|+.+|+++.+. .++.+++.+|.++.. + ++++|+.+|+
T Consensus 3 ~eA~~~~~~aa~~--g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~ 77 (212)
T 3rjv_A 3 TEPGSQYQQQAEA--GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQ--GDGDALALLAQLKIR-NPQQADYPQARQLAE 77 (212)
T ss_dssp -CTTHHHHHHHHT--TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--TCHHHHHHHHHHTTS-STTSCCHHHHHHHHH
T ss_pred chHHHHHHHHHHC--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHH
Confidence 3578889998876 68999999999999999999999999999875 578999999999998 7 9999999999
Q ss_pred HHHHcCCCchHHHHHhccCchHHHHHHHHHHHH----hcccCchhhHHHHHhhcCh--hhHHHHHHHHHHHHH----cCC
Q psy17412 139 QLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLH----LQLYDPVLPDCDKALRLDE--DNMKAHLYKARAMHN----LGQ 208 (240)
Q Consensus 139 ~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~l~~~~--~~~~~~~~la~~~~~----~g~ 208 (240)
++.+ +.++.. ++++|.+|.. .+++++|+.+|+++.+..| .++.+++.+|.+|.. .++
T Consensus 78 ~A~~--~g~~~a-----------~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d 144 (212)
T 3rjv_A 78 KAVE--AGSKSG-----------EIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPED 144 (212)
T ss_dssp HHHH--TTCHHH-----------HHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCC
T ss_pred HHHH--CCCHHH-----------HHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCC
Confidence 9976 455555 9999999998 8899999999999999988 569999999999999 899
Q ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHhhh
Q psy17412 209 REEAKEYIRELVEKYPTRRKLVENYTQAFE 238 (240)
Q Consensus 209 ~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 238 (240)
+++|+.+|+++... |.++.+...++.++.
T Consensus 145 ~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~ 173 (212)
T 3rjv_A 145 DVKASEYFKGSSSL-SRTGYAEYWAGMMFQ 173 (212)
T ss_dssp HHHHHHHHHHHHHT-SCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCCHHHHHHHHHHHH
Confidence 99999999999998 677788899988875
No 135
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.78 E-value=3.5e-19 Score=141.52 Aligned_cols=139 Identities=21% Similarity=0.363 Sum_probs=124.8
Q ss_pred hhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHH
Q psy17412 43 QDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKAR 122 (240)
Q Consensus 43 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 122 (240)
+..+..+..+|..+...|++++|++.|+++++.+|++..++.++|.++...|++++|+..++++++++|+++.+++.+|.
T Consensus 3 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~ 82 (477)
T 1wao_1 3 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAA 82 (477)
T ss_dssp HHHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 34567788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHH--HHHhcccCchhhHHH-----------HHhhcC
Q psy17412 123 AMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALT--LLHLQLYDPVLPDCD-----------KALRLD 189 (240)
Q Consensus 123 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~--~~~~~~~~~A~~~~~-----------~~l~~~ 189 (240)
++..+|++++|+..+++++++.|++... +..++.+ +...|++++|++.++ +++...
T Consensus 83 ~~~~~g~~~eA~~~~~~al~~~p~~~~~-----------~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~ 151 (477)
T 1wao_1 83 SNMALGKFRAALRDYETVVKVKPHDKDA-----------KMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIE 151 (477)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSTTCTTH-----------HHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCC
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHH-----------HHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhcccc
Confidence 9999999999999999999999998777 8888888 889999999999999 777776
Q ss_pred hhh
Q psy17412 190 EDN 192 (240)
Q Consensus 190 ~~~ 192 (240)
|+.
T Consensus 152 ~~~ 154 (477)
T 1wao_1 152 DEY 154 (477)
T ss_dssp TTC
T ss_pred ccc
Confidence 653
No 136
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.77 E-value=1.7e-17 Score=113.12 Aligned_cols=124 Identities=19% Similarity=0.212 Sum_probs=105.9
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------CCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHH
Q psy17412 113 NMKAHLYKARAMHSLGQREEAKEYVRQLVEK--------YPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDK 184 (240)
Q Consensus 113 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 184 (240)
.+..+..+|..++..|++++|+..|++++.+ .|.++.. ....|..+.++.++|.++...|++++|+..+++
T Consensus 10 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 10 SVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEW-VELDRKNIPLYANMSQCYLNIGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHH-HHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHH-HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 3567888899999999999999999999888 4444332 233445566799999999999999999999999
Q ss_pred HhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH-HHHHHHHHhh
Q psy17412 185 ALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRR-KLVENYTQAF 237 (240)
Q Consensus 185 ~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~-~~~~~l~~~~ 237 (240)
+++++|+++.+++.+|.++..+|++++|+..|++++.++|+++ .+...+..+.
T Consensus 89 al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~ 142 (162)
T 3rkv_A 89 VLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVT 142 (162)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHH
T ss_pred HHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998 6666666554
No 137
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.77 E-value=4e-18 Score=110.43 Aligned_cols=102 Identities=12% Similarity=0.104 Sum_probs=93.5
Q ss_pred HHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHH
Q psy17412 47 DHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHS 126 (240)
Q Consensus 47 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 126 (240)
..++.+|..+...|++++|+..|+++++.+|+++.+|+.+|.++...|++++|+..|+++++++|+++.+++.+|.++..
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~ 97 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 97 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHcCCCch
Q psy17412 127 LGQREEAKEYVRQLVEKYPTRR 148 (240)
Q Consensus 127 ~~~~~~A~~~~~~a~~~~~~~~ 148 (240)
.|++++|+..++++++.+|++.
T Consensus 98 ~g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 98 EHNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp HHHHHHHHHHHHHHHC------
T ss_pred cCCHHHHHHHHHHHHHhCcCCC
Confidence 9999999999999999999864
No 138
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.77 E-value=1.4e-18 Score=115.71 Aligned_cols=120 Identities=24% Similarity=0.227 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHH-HHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhc----
Q psy17412 114 MKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKL-AIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRL---- 188 (240)
Q Consensus 114 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~---- 188 (240)
...+..+|..++..|+|++|+..|+++++++|+++.. .+...|.++.+|.++|.++..+|+|++|+..+++++++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 4567888999999999999999999999999884221 00011123347999999999999999999999999999
Q ss_pred ---ChhhHHHH----HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy17412 189 ---DEDNMKAH----LYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENY 233 (240)
Q Consensus 189 ---~~~~~~~~----~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l 233 (240)
+|++..+| +++|.++..+|++++|+..|+++++++|++..+...+
T Consensus 91 ~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~ 142 (159)
T 2hr2_A 91 GELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGK 142 (159)
T ss_dssp CCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTH
T ss_pred ccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 99999999 9999999999999999999999999999876544433
No 139
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.77 E-value=7.7e-18 Score=133.26 Aligned_cols=130 Identities=23% Similarity=0.298 Sum_probs=119.3
Q ss_pred hchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCC---------------hHHHHHHHHHHHHccCcCchHHHHHH
Q psy17412 41 ARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDS---------------PVLYTNRALTLLHLQLYDPVLPDCDK 105 (240)
Q Consensus 41 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~ 105 (240)
..+..+..+..+|..++..|+|++|+..|+++++.+|.+ ..++.++|.|+..+|++++|+..|++
T Consensus 263 ~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~ 342 (457)
T 1kt0_A 263 EKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDK 342 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 456688899999999999999999999999999999998 68999999999999999999999999
Q ss_pred HHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhH
Q psy17412 106 ALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPD 181 (240)
Q Consensus 106 ~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~ 181 (240)
+++++|+++.+++.+|.++..+|++++|+..|+++++++|++... +..++.++...++++++...
T Consensus 343 al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a-----------~~~l~~~~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 343 ALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAA-----------RLQISMCQKKAKEHNERDRR 407 (457)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CH-----------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHH-----------HHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998877 99999999999999887653
No 140
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.77 E-value=8.6e-18 Score=111.12 Aligned_cols=104 Identities=15% Similarity=0.081 Sum_probs=52.1
Q ss_pred CCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhcc
Q psy17412 77 RDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVR 156 (240)
Q Consensus 77 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 156 (240)
|.++..+..+|.+++..|++++|+..|++++..+|+++.++..+|.++..+|++++|+..++++++++|+++..
T Consensus 6 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~------ 79 (137)
T 3q49_B 6 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKA------ 79 (137)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH------
T ss_pred cccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHH------
Confidence 33444455555555555555555555555555555555555555555555555555555555555555444444
Q ss_pred CchHHHHHHHHHHHHhcccCchhhHHHHHhhcChh
Q psy17412 157 DSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDED 191 (240)
Q Consensus 157 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~ 191 (240)
+..+|.++...|++++|+..+.++++.+|+
T Consensus 80 -----~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 80 -----HFFLGQCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp -----HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHhhHHHHHHHHHHHHHHChh
Confidence 455555555555555555555555544444
No 141
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.77 E-value=3.7e-17 Score=115.17 Aligned_cols=162 Identities=12% Similarity=0.024 Sum_probs=130.6
Q ss_pred HHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHh------cCcccHHHHHHHHHHHHHcCC
Q psy17412 56 AFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALR------LDEDNMKAHLYKARAMHSLGQ 129 (240)
Q Consensus 56 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~------~~~~~~~~~~~la~~~~~~~~ 129 (240)
.+..|++++|.+.++......+....++..+|.++...|++++|+..+++++. ..+....++..+|.++...|+
T Consensus 2 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 81 (203)
T 3gw4_A 2 AFEAHDYALAERQAQALLAHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGN 81 (203)
T ss_dssp -----CHHHHHHHHHHHHTSTTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC
T ss_pred ccccccHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCC
Confidence 35689999999965555443335678999999999999999999999999998 445667899999999999999
Q ss_pred HHHHHHHHHHHHHc---CCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChh------hHHHHHHHH
Q psy17412 130 REEAKEYVRQLVEK---YPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDED------NMKAHLYKA 200 (240)
Q Consensus 130 ~~~A~~~~~~a~~~---~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~------~~~~~~~la 200 (240)
+++|+..+++++.+ .++++. ....++.++|.++...|++++|+..++++++..+. ...++..+|
T Consensus 82 ~~~A~~~~~~al~~~~~~~~~~~-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la 154 (203)
T 3gw4_A 82 WDAARRCFLEERELLASLPEDPL-------AASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLG 154 (203)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCHH-------HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCccHH-------HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 99999999999988 442221 11456899999999999999999999999876432 244578999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCC
Q psy17412 201 RAMHNLGQREEAKEYIRELVEKYP 224 (240)
Q Consensus 201 ~~~~~~g~~~~A~~~~~~~~~~~p 224 (240)
.++...|++++|..++++++.+..
T Consensus 155 ~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 155 DLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHCcCHHHHHHHHHHHHHHHH
Confidence 999999999999999999997653
No 142
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.77 E-value=1.9e-18 Score=128.34 Aligned_cols=147 Identities=15% Similarity=0.065 Sum_probs=128.3
Q ss_pred CCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhcc
Q psy17412 77 RDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVR 156 (240)
Q Consensus 77 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 156 (240)
|.++..+..+|..+...|++++|+..|++++..+|+++.++.++|.++..+|++++|+..++++++++|++...
T Consensus 1 p~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~------ 74 (281)
T 2c2l_A 1 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKA------ 74 (281)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHH------
T ss_pred ChhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHH------
Confidence 56678899999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred CchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhH-----HHH--------------------------HHHHHHHHH
Q psy17412 157 DSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNM-----KAH--------------------------LYKARAMHN 205 (240)
Q Consensus 157 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~-----~~~--------------------------~~la~~~~~ 205 (240)
++.+|.++...|++++|+..|+++++++|++. .++ ..++.+ .
T Consensus 75 -----~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l--~ 147 (281)
T 2c2l_A 75 -----HFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLTRL--I 147 (281)
T ss_dssp -----HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHH--H
T ss_pred -----HHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH--H
Confidence 99999999999999999999999999988651 111 122222 3
Q ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHh
Q psy17412 206 LGQREEAKEYIRELVEKYPTRRKLVENYTQA 236 (240)
Q Consensus 206 ~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~ 236 (240)
.|++++|++.++++++.+|++......+..+
T Consensus 148 ~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 178 (281)
T 2c2l_A 148 AAERERELEECQRNHEGHEDDGHIRAQQACI 178 (281)
T ss_dssp HHHHHHHHTTTSGGGTTTSCHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHhhhccccchhhhhhHHHHH
Confidence 6899999999999999999887666665544
No 143
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.76 E-value=3.5e-17 Score=104.93 Aligned_cols=115 Identities=23% Similarity=0.205 Sum_probs=91.9
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhh
Q psy17412 113 NMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN 192 (240)
Q Consensus 113 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~ 192 (240)
.+..++.+|.++...|++++|+..+++++...|.++.. +..+|.++...|++++|+..++++++.+|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~-----------~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 71 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVL-----------YSNRSAAYAKKGDYQKAYEDGCKTVDLKPDW 71 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHH-----------HHHHHHHHHhhccHHHHHHHHHHHHHhCccc
Confidence 35667778888888888888888888888888777666 8888888888888888888888888888888
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhh
Q psy17412 193 MKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFE 238 (240)
Q Consensus 193 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 238 (240)
+.++..+|.++...|++++|..+++++++.+|+++.++..++.+..
T Consensus 72 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 72 GKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 8888888888888888888888888888888888888777776643
No 144
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.76 E-value=1e-17 Score=110.75 Aligned_cols=105 Identities=30% Similarity=0.451 Sum_probs=80.3
Q ss_pred chhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHH
Q psy17412 42 RQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKA 121 (240)
Q Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la 121 (240)
.+..+..++.+|..++..|++++|+..|++++..+|+++.++..+|.++...|++++|+..+++++.++|+++.+++.+|
T Consensus 5 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 84 (137)
T 3q49_B 5 KSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLG 84 (137)
T ss_dssp -CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHH
Confidence 44566777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHcCCHHHHHHHHHHHHHcCCC
Q psy17412 122 RAMHSLGQREEAKEYVRQLVEKYPT 146 (240)
Q Consensus 122 ~~~~~~~~~~~A~~~~~~a~~~~~~ 146 (240)
.++..+|++++|+..+++++++.|+
T Consensus 85 ~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 85 QCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHHChh
Confidence 7777777777777777777777665
No 145
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.76 E-value=4.4e-17 Score=104.45 Aligned_cols=114 Identities=27% Similarity=0.269 Sum_probs=108.0
Q ss_pred HHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHH
Q psy17412 45 IADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAM 124 (240)
Q Consensus 45 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 124 (240)
.+..++.+|..+...|++++|+..|++++..+|.++.++..+|.++...|++++|+..+++++...|+++.++..+|.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAAL 82 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHH
Q psy17412 125 HSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTL 169 (240)
Q Consensus 125 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 169 (240)
...|++++|...++++++..|+++.. +..++.+.
T Consensus 83 ~~~~~~~~A~~~~~~~~~~~~~~~~~-----------~~~l~~~~ 116 (118)
T 1elw_A 83 EFLNRFEEAKRTYEEGLKHEANNPQL-----------KEGLQNME 116 (118)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTCHHH-----------HHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHcCCCCHHH-----------HHHHHHhh
Confidence 99999999999999999999998777 77777654
No 146
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.75 E-value=3.9e-17 Score=105.74 Aligned_cols=105 Identities=27% Similarity=0.366 Sum_probs=55.8
Q ss_pred HHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHH
Q psy17412 46 ADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMH 125 (240)
Q Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 125 (240)
+..++.+|..+...|++++|+..|++++...|++..++..+|.++...|++++|+..+++++...|.++.++..+|.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 88 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY 88 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH
Confidence 44455555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred HcCCHHHHHHHHHHHHHcCCCchHH
Q psy17412 126 SLGQREEAKEYVRQLVEKYPTRRKL 150 (240)
Q Consensus 126 ~~~~~~~A~~~~~~a~~~~~~~~~~ 150 (240)
..|++++|+..++++++..|+++..
T Consensus 89 ~~~~~~~A~~~~~~~~~~~~~~~~~ 113 (125)
T 1na0_A 89 KQGDYDEAIEYYQKALELDPNNAEA 113 (125)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCcHHH
Confidence 5555555555555555555544444
No 147
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.75 E-value=1.2e-16 Score=103.50 Aligned_cols=91 Identities=24% Similarity=0.322 Sum_probs=84.2
Q ss_pred HHHhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHH
Q psy17412 38 ERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAH 117 (240)
Q Consensus 38 ~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 117 (240)
.....+.....+..+|.++...|++++|+..+++++...|.++.++..+|.++...|++++|+..+++++...|.++.++
T Consensus 35 ~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 114 (125)
T 1na0_A 35 ALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAK 114 (125)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHH
Confidence 34556778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcC
Q psy17412 118 LYKARAMHSLG 128 (240)
Q Consensus 118 ~~la~~~~~~~ 128 (240)
..+|.++...|
T Consensus 115 ~~l~~~~~~~g 125 (125)
T 1na0_A 115 QNLGNAKQKQG 125 (125)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhcc
Confidence 99999887654
No 148
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.75 E-value=9.1e-18 Score=108.72 Aligned_cols=99 Identities=18% Similarity=0.149 Sum_probs=54.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHH
Q psy17412 117 HLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAH 196 (240)
Q Consensus 117 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~ 196 (240)
++.+|..+...|++++|+..++++++.+|++... +..+|.++...|++++|+..|+++++++|+++.++
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a-----------~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 88 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKEPEREEA-----------WRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVH 88 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHH-----------HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHH-----------HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 4455555555555555555555555555555554 55555555555555555555555555555555555
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Q psy17412 197 LYKARAMHNLGQREEAKEYIRELVEKYPTR 226 (240)
Q Consensus 197 ~~la~~~~~~g~~~~A~~~~~~~~~~~p~~ 226 (240)
..+|.++...|++++|+..++++++.+|++
T Consensus 89 ~~la~~~~~~g~~~~A~~~~~~al~~~P~~ 118 (121)
T 1hxi_A 89 AALAVSHTNEHNANAALASLRAWLLSQPQY 118 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCcCC
Confidence 555555555555555555555555555544
No 149
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.75 E-value=1.7e-18 Score=131.87 Aligned_cols=159 Identities=19% Similarity=0.179 Sum_probs=88.8
Q ss_pred chhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHH
Q psy17412 42 RQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKA 121 (240)
Q Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la 121 (240)
.+..+..+..+|..++..|+|++|+..|++++...|++.. +...+++.++...+. ..++.++|
T Consensus 175 ~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~--------~~~~~~~~~~~~~l~---------~~~~~nla 237 (338)
T 2if4_A 175 RIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFM--------FQLYGKYQDMALAVK---------NPCHLNIA 237 (338)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHH--------HTCCHHHHHHHHHHH---------THHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchh--------hhhcccHHHHHHHHH---------HHHHHHHH
Confidence 4456788999999999999999999999999999887642 122233333322221 23677788
Q ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHH
Q psy17412 122 RAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKAR 201 (240)
Q Consensus 122 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~ 201 (240)
.++..+|++++|+.+++++++++|++... ++++|.++...|++++|+..|+++++++|++..++..++.
T Consensus 238 ~~~~~~g~~~~A~~~~~~al~~~p~~~~a-----------~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~ 306 (338)
T 2if4_A 238 ACLIKLKRYDEAIGHCNIVLTEEEKNPKA-----------LFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRA 306 (338)
T ss_dssp HHHHTTTCCHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHTTTCHHHHHHHHHHTTC--------------
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHH-----------HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 88888888888888888888888877766 8888888888888888888888888888888888888777
Q ss_pred H-HHHcCCHHHHHHHHHHHHHhCCCcHH
Q psy17412 202 A-MHNLGQREEAKEYIRELVEKYPTRRK 228 (240)
Q Consensus 202 ~-~~~~g~~~~A~~~~~~~~~~~p~~~~ 228 (240)
+ ....+..+++...|.+++...|.++.
T Consensus 307 l~~~~~~~~~~a~~~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 307 LAEQEKALYQKQKEMYKGIFKGKDEGGA 334 (338)
T ss_dssp ----------------------------
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 7 44456677777788888887777654
No 150
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.75 E-value=1e-17 Score=122.21 Aligned_cols=181 Identities=11% Similarity=0.005 Sum_probs=155.2
Q ss_pred HHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHH-------HHHHHHccCcCchHHHHHHHHhcCcccH---
Q psy17412 45 IADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNR-------ALTLLHLQLYDPVLPDCDKALRLDEDNM--- 114 (240)
Q Consensus 45 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l-------a~~~~~~~~~~~A~~~~~~~~~~~~~~~--- 114 (240)
....++..|.-+ ..+++..|.+.|.+++..+|+...+|..+ +.++...++..+++..+++.+.+.|...
T Consensus 6 ~~~~~~~~~~~~-~~~d~~~A~~~F~~a~~~dP~~~Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~~l~l~p~~l~a~ 84 (282)
T 4f3v_A 6 RLASLFESAVSM-LPMSEARSLDLFTEITNYDESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMSTLNAR 84 (282)
T ss_dssp HHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHHTTTCCGGGGCCE
T ss_pred HHHHHHHHHhcc-cCCCHHHHHHHHHHHHHhChhhhHHHHhHHHccCCcHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Confidence 445566666665 68999999999999999999999999999 8999999999999999999999877543
Q ss_pred ------------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccC
Q psy17412 115 ------------------KAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYD 176 (240)
Q Consensus 115 ------------------~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 176 (240)
++...++.++...|++++|...|..++...|.+. . .+.+|.++.+.++++
T Consensus 85 ~~~~g~y~~~~~~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~-----------~~~~a~l~~~~~r~~ 152 (282)
T 4f3v_A 85 IAIGGLYGDITYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPVAGSEHL-V-----------AWMKAVVYGAAERWT 152 (282)
T ss_dssp EECCTTTCCCEEECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH-H-----------HHHHHHHHHHTTCHH
T ss_pred hccCCcccccccccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchH-H-----------HHHHHHHHHHcCCHH
Confidence 3445588999999999999999999998888766 6 899999999999999
Q ss_pred chhhHHHHHhhcC-hhh-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CC-cHHHHHHHHHhhh
Q psy17412 177 PVLPDCDKALRLD-EDN-MKAHLYKARAMHNLGQREEAKEYIRELVEKY--PT-RRKLVENYTQAFE 238 (240)
Q Consensus 177 ~A~~~~~~~l~~~-~~~-~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~--p~-~~~~~~~l~~~~~ 238 (240)
+|+..|+.+.... |.. ..+++.+|.++..+|++++|+.+|+++..-. |. .++++..++.++.
T Consensus 153 dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~ 219 (282)
T 4f3v_A 153 DVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARR 219 (282)
T ss_dssp HHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHH
Confidence 9999999887763 332 4589999999999999999999999998543 54 5667787777765
No 151
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=5.7e-17 Score=108.37 Aligned_cols=123 Identities=20% Similarity=0.218 Sum_probs=105.4
Q ss_pred cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhc
Q psy17412 109 LDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRL 188 (240)
Q Consensus 109 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~ 188 (240)
..|.....++.+|..+...|++++|+..|+++++..|++... ..++..+|.++...|++++|+..++++++.
T Consensus 23 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~--------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 94 (148)
T 2dba_A 23 PGASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQ--------AVLHRNRAACHLKLEDYDKAETEASKAIEK 94 (148)
T ss_dssp TTCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHH--------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHH--------HHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 446778888999999999999999999999999988886221 233889999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhhc
Q psy17412 189 DEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFEQ 239 (240)
Q Consensus 189 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 239 (240)
+|+++.++..+|.++..+|++++|+.+|++++..+|+++.++..+.++.++
T Consensus 95 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 145 (148)
T 2dba_A 95 DGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNISGP 145 (148)
T ss_dssp TSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHCS
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHhh
Confidence 998899999999999999999999999999999999999988888877653
No 152
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.75 E-value=3.7e-16 Score=124.83 Aligned_cols=173 Identities=14% Similarity=-0.045 Sum_probs=111.3
Q ss_pred HHHHHHhHhHHHH----hCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc-----cCcCchHHHHHHHHhcCcccHHH
Q psy17412 46 ADHFKANGNKAFQ----SGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHL-----QLYDPVLPDCDKALRLDEDNMKA 116 (240)
Q Consensus 46 ~~~~~~~a~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~-----~~~~~A~~~~~~~~~~~~~~~~~ 116 (240)
+.+++.+|.++.. .+++++|+.+|+++.+. .++.+++.+|.+|... +++++|+.+|+++++. .++.+
T Consensus 255 ~~a~~~lg~~y~~g~~~~~d~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a 330 (490)
T 2xm6_A 255 SIAQFRLGYILEQGLAGAKEPLKALEWYRKSAEQ--GNSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQ--GDATA 330 (490)
T ss_dssp HHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHT--TCHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhc--CCHHH
Confidence 4444555555554 45555555555555433 3344555555555554 5555555555555543 23345
Q ss_pred HHHHHHHHHHcC---CHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHH----hcccCchhhHHHHHhhcC
Q psy17412 117 HLYKARAMHSLG---QREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLH----LQLYDPVLPDCDKALRLD 189 (240)
Q Consensus 117 ~~~la~~~~~~~---~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~l~~~ 189 (240)
++.+|.++...| ++++|+.+|+++++. . ++..++++|.+|.. .+++++|+.+|+++.+..
T Consensus 331 ~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~-----------~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~ 397 (490)
T 2xm6_A 331 QANLGAIYFRLGSEEEHKKAVEWFRKAAAK--G-----------EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG 397 (490)
T ss_dssp HHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--T-----------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCcccHHHHHHHHHHHHHC--C-----------CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC
Confidence 555555555533 455555555555544 2 24458889999888 788899999999988754
Q ss_pred hhhHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCC---cHHHHHHHHHhh
Q psy17412 190 EDNMKAHLYKARAMHN----LGQREEAKEYIRELVEKYPT---RRKLVENYTQAF 237 (240)
Q Consensus 190 ~~~~~~~~~la~~~~~----~g~~~~A~~~~~~~~~~~p~---~~~~~~~l~~~~ 237 (240)
++.++..+|.+|.. .+++++|+.+|++++..+|+ ++.+...++.+.
T Consensus 398 --~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~~a~~~l~~~~ 450 (490)
T 2xm6_A 398 --LSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMNLFGTENRNITEKKLT 450 (490)
T ss_dssp --CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHTTSC
T ss_pred --CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCCCcCCHHHHHHHHhcC
Confidence 57788899999988 88999999999999988844 777777776654
No 153
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.75 E-value=4.6e-18 Score=127.85 Aligned_cols=136 Identities=10% Similarity=0.052 Sum_probs=114.9
Q ss_pred HHHHHHHHccCcCchHHHHHHHHhcCcc------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCc
Q psy17412 85 NRALTLLHLQLYDPVLPDCDKALRLDED------NMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDS 158 (240)
Q Consensus 85 ~la~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 158 (240)
..|.+|...|++++|+..|.+++.+.+. ...++..+|.++..+|++++|+.+|++++++.+..... ...
T Consensus 41 ~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~-----~~~ 115 (307)
T 2ifu_A 41 KAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTP-----DTA 115 (307)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCH-----HHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCH-----HHH
Confidence 3477899999999999999999988643 25688999999999999999999999999985432111 112
Q ss_pred hHHHHHHHHHHHHhcccCchhhHHHHHhhcChhh------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Q psy17412 159 PVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN------MKAHLYKARAMHNLGQREEAKEYIRELVEKYPTR 226 (240)
Q Consensus 159 ~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~------~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~ 226 (240)
...+.++|.++.. |++++|+.+|++++++.|.. ..++.++|.++..+|++++|+.+|++++.+.|.+
T Consensus 116 a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 116 AMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp HHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 4568999999999 99999999999999987753 6788999999999999999999999999986644
No 154
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.74 E-value=1.3e-16 Score=126.12 Aligned_cols=172 Identities=10% Similarity=-0.022 Sum_probs=149.4
Q ss_pred HHHHHHHhHhHHHHhC---CHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc----cCcCchHHHHHHHHhcCcccHHHH
Q psy17412 45 IADHFKANGNKAFQSG---QYEAALVQYDKAIEQVRDSPVLYTNRALTLLHL----QLYDPVLPDCDKALRLDEDNMKAH 117 (240)
Q Consensus 45 ~~~~~~~~a~~~~~~~---~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~----~~~~~A~~~~~~~~~~~~~~~~~~ 117 (240)
++.+++.+|.++...| ++++|+..|+++.+..|.....++++|.+|... +++++|+.+|+++. |.++.++
T Consensus 175 ~~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~ 251 (452)
T 3e4b_A 175 TDICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASW 251 (452)
T ss_dssp CTTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHH
T ss_pred CHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHH
Confidence 4448999999999999 999999999999999999988889999999765 68999999999998 8999999
Q ss_pred HHHHHH-H--HHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhc-----ccCchhhHHHHHhhcC
Q psy17412 118 LYKARA-M--HSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQ-----LYDPVLPDCDKALRLD 189 (240)
Q Consensus 118 ~~la~~-~--~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-----~~~~A~~~~~~~l~~~ 189 (240)
+.+|.+ + ...+++++|+.+|+++.+.. ++.. ++++|.+|. .| ++++|+.+|+++.
T Consensus 252 ~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g--~~~A-----------~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa--- 314 (452)
T 3e4b_A 252 VSLAQLLYDFPELGDVEQMMKYLDNGRAAD--QPRA-----------ELLLGKLYY-EGKWVPADAKAAEAHFEKAV--- 314 (452)
T ss_dssp HHHHHHHHHSGGGCCHHHHHHHHHHHHHTT--CHHH-----------HHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHHHHHHCC--CHHH-----------HHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---
Confidence 999998 4 57899999999999998754 5555 999999998 55 8999999999998
Q ss_pred hhhHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhh
Q psy17412 190 EDNMKAHLYKARAMHN----LGQREEAKEYIRELVEKYPTRRKLVENYTQAFE 238 (240)
Q Consensus 190 ~~~~~~~~~la~~~~~----~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 238 (240)
+.++.+++.+|.+|.. ..++++|+.+|+++.+. .++.+...++.++.
T Consensus 315 ~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~ 365 (452)
T 3e4b_A 315 GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARN--GQNSADFAIAQLFS 365 (452)
T ss_dssp TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTT--TCTTHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhh--ChHHHHHHHHHHHH
Confidence 8889999999988877 44999999999998864 56777788887764
No 155
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.73 E-value=1.3e-15 Score=121.69 Aligned_cols=160 Identities=15% Similarity=0.027 Sum_probs=90.0
Q ss_pred hhHHHHHHHhHhHHHH----hCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH----ccCcCchHHHHHHHHhcCcccH
Q psy17412 43 QDIADHFKANGNKAFQ----SGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLH----LQLYDPVLPDCDKALRLDEDNM 114 (240)
Q Consensus 43 ~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~~~~~~~ 114 (240)
+.++.+++.+|..+.. .+++++|+.+|+++.+. .++.+++.+|.+|.. .+++++|+.+|+++.+. .++
T Consensus 36 ~g~~~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~ 111 (490)
T 2xm6_A 36 SGEAKAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQ--GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK--GLP 111 (490)
T ss_dssp TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCH
T ss_pred CCCHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCH
Confidence 4455666666666666 66666666666666654 455666666666666 66666666666666653 355
Q ss_pred HHHHHHHHHHHH----cCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHH----hcccCchhhHHHHHh
Q psy17412 115 KAHLYKARAMHS----LGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLH----LQLYDPVLPDCDKAL 186 (240)
Q Consensus 115 ~~~~~la~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~l 186 (240)
.+++.+|.++.. .+++++|+.+|+++.+.. ++.. +..+|.+|.. .+++++|+.+|++++
T Consensus 112 ~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~--~~~a-----------~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~ 178 (490)
T 2xm6_A 112 QAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQG--RDSG-----------QQSMGDAYFEGDGVTRDYVMAREWYSKAA 178 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHH-----------HHHHHHHHHHTSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC--CHHH-----------HHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence 666666666666 566666666666665542 2222 4444444444 344444444444444
Q ss_pred hcChhhHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Q psy17412 187 RLDEDNMKAHLYKARAMHN----LGQREEAKEYIRELVE 221 (240)
Q Consensus 187 ~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~~~~ 221 (240)
+. .++.++..+|.+|.. .+++++|+.+|+++..
T Consensus 179 ~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~ 215 (490)
T 2xm6_A 179 EQ--GNVWSCNQLGYMYSRGLGVERNDAISAQWYRKSAT 215 (490)
T ss_dssp HT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred HC--CCHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHH
Confidence 43 234444444444444 4444444444444443
No 156
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.73 E-value=1.4e-16 Score=104.01 Aligned_cols=119 Identities=21% Similarity=0.224 Sum_probs=108.7
Q ss_pred hHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCccc-------HHH
Q psy17412 44 DIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN-------MKA 116 (240)
Q Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-------~~~ 116 (240)
..+..++.+|..+...|++++|+..|++++..+|.++.++..+|.++...|++++|+..+++++...|.+ +.+
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 81 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKA 81 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHH
Confidence 4577899999999999999999999999999999999999999999999999999999999999998877 889
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcc
Q psy17412 117 HLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQL 174 (240)
Q Consensus 117 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~ 174 (240)
++.+|.++...|++++|+..++++++..|+ +.. ...++.+....++
T Consensus 82 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~-----------~~~l~~~~~~~~~ 127 (131)
T 1elr_A 82 YARIGNSYFKEEKYKDAIHFYNKSLAEHRT-PDV-----------LKKCQQAEKILKE 127 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-HHH-----------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCC-HHH-----------HHHHHHHHHHHHH
Confidence 999999999999999999999999999984 555 7777777666554
No 157
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.73 E-value=3.8e-16 Score=115.43 Aligned_cols=175 Identities=11% Similarity=0.002 Sum_probs=147.1
Q ss_pred hHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcC--CChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcc------cHH
Q psy17412 44 DIADHFKANGNKAFQSGQYEAALVQYDKAIEQVR--DSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDED------NMK 115 (240)
Q Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~--~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~------~~~ 115 (240)
.....+..+|.++...|++++|++.+.+.+..+| ++..++..++.++...|+.+.|.+.++++.+.+|+ ...
T Consensus 98 ~~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l 177 (310)
T 3mv2_B 98 NSPYELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMI 177 (310)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHH
Confidence 4455667899999999999999999999999987 78899999999999999999999999999999883 333
Q ss_pred HHHHHHHHHHHcC--CHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhc-----
Q psy17412 116 AHLYKARAMHSLG--QREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRL----- 188 (240)
Q Consensus 116 ~~~~la~~~~~~~--~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~----- 188 (240)
....-|++....| ++.+|...|+++....|+.... ..+++ ++.++|++++|...++.+++.
T Consensus 178 ~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~---------~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~ 245 (310)
T 3mv2_B 178 LNLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQ---------LGLLN---LHLQQRNIAEAQGIVELLLSDYYSVE 245 (310)
T ss_dssp HHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHH---------HHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTT
T ss_pred HHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccH---------HHHHH---HHHHcCCHHHHHHHHHHHHHhccccc
Confidence 3444455577667 9999999999998888862221 11334 899999999999999988876
Q ss_pred -----ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHH
Q psy17412 189 -----DEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVEN 232 (240)
Q Consensus 189 -----~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~ 232 (240)
+|+++.++.+++.+...+|+ +|.++++++.+.+|+++.+...
T Consensus 246 ~k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp~i~d~ 292 (310)
T 3mv2_B 246 QKENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKLDHEHAFIKHH 292 (310)
T ss_dssp TCHHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCHHHHHH
T ss_pred ccccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCChHHHHH
Confidence 47799999999999999998 8999999999999999876544
No 158
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.73 E-value=3e-18 Score=130.45 Aligned_cols=76 Identities=25% Similarity=0.366 Sum_probs=59.5
Q ss_pred HHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhh
Q psy17412 162 YTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAF 237 (240)
Q Consensus 162 ~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~ 237 (240)
+.++|.++...|++++|+..++++++.+|++..+++++|.++..+|++++|+.+|+++++++|+++.++..++.+.
T Consensus 233 ~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~ 308 (338)
T 2if4_A 233 HLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALA 308 (338)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC----------------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988888763
No 159
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.73 E-value=1.4e-16 Score=104.07 Aligned_cols=104 Identities=12% Similarity=0.082 Sum_probs=98.7
Q ss_pred HHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCCh---HHHHHHHHHHHHccCcCchHHHHHHHHhcCccc---HHHHHHH
Q psy17412 47 DHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSP---VLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN---MKAHLYK 120 (240)
Q Consensus 47 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~---~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~---~~~~~~l 120 (240)
..++.+|..++..|++++|+..|++++..+|+++ .+++.+|.++...|++++|+..+++++...|++ +.+++.+
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l 82 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKL 82 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHH
Confidence 3578899999999999999999999999999988 799999999999999999999999999999998 8899999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCchHH
Q psy17412 121 ARAMHSLGQREEAKEYVRQLVEKYPTRRKL 150 (240)
Q Consensus 121 a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 150 (240)
|.++..+|++++|+..++++++..|+++..
T Consensus 83 a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~ 112 (129)
T 2xev_A 83 GLSQYGEGKNTEAQQTLQQVATQYPGSDAA 112 (129)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTSHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCCCChHH
Confidence 999999999999999999999999997765
No 160
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.73 E-value=1.2e-16 Score=104.38 Aligned_cols=111 Identities=12% Similarity=0.093 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhh---
Q psy17412 116 AHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN--- 192 (240)
Q Consensus 116 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~--- 192 (240)
+++.+|.++...|++++|+..++++++..|+++.. +.+++.+|.++...|++++|+..++++++.+|++
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~--------~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~ 75 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYT--------PNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKA 75 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTH--------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCccc--------HHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCccc
Confidence 34566666666666666766666666666665521 1226666666767777777777777776666666
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q psy17412 193 MKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYT 234 (240)
Q Consensus 193 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~ 234 (240)
+.+++.+|.++..+|++++|+..|++++..+|+++.+.....
T Consensus 76 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~ 117 (129)
T 2xev_A 76 AGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQE 117 (129)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHH
Confidence 666677777777777777777777777777776665554443
No 161
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.72 E-value=3e-16 Score=118.12 Aligned_cols=161 Identities=11% Similarity=0.001 Sum_probs=151.4
Q ss_pred HHHhchhHHHHHHHhHhHHHHhC-CHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc-c-CcCchHHHHHHHHhcCcccH
Q psy17412 38 ERKARQDIADHFKANGNKAFQSG-QYEAALVQYDKAIEQVRDSPVLYTNRALTLLHL-Q-LYDPVLPDCDKALRLDEDNM 114 (240)
Q Consensus 38 ~~~~~~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~-~-~~~~A~~~~~~~~~~~~~~~ 114 (240)
....+|+...+|..++.++...| .+++++..+++++..+|++..+|..++.+.... + +++++++.+.++++.+|.+.
T Consensus 80 ~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy 159 (349)
T 3q7a_A 80 IVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNY 159 (349)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCH
T ss_pred HHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCH
Confidence 46678999999999999999999 599999999999999999999999999999998 8 89999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHH--------HHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcc-------cCchh
Q psy17412 115 KAHLYKARAMHSLGQRE--------EAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQL-------YDPVL 179 (240)
Q Consensus 115 ~~~~~la~~~~~~~~~~--------~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-------~~~A~ 179 (240)
.+|..++.+....|.++ +++..++++++.+|.+..+ |..++.++...++ +++++
T Consensus 160 ~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SA-----------W~~R~~lL~~l~~~~~~~~~~~eEL 228 (349)
T 3q7a_A 160 HTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSA-----------WGWRWYLRVSRPGAETSSRSLQDEL 228 (349)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHTTSTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHH-----------HHHHHHHHHhccccccchHHHHHHH
Confidence 99999999999999888 9999999999999999888 9999999999887 68999
Q ss_pred hHHHHHhhcChhhHHHHHHHHHHHHHcCCH
Q psy17412 180 PDCDKALRLDEDNMKAHLYKARAMHNLGQR 209 (240)
Q Consensus 180 ~~~~~~l~~~~~~~~~~~~la~~~~~~g~~ 209 (240)
+++++++..+|++..+|..+..++...|+.
T Consensus 229 e~~~~aI~~~P~n~SaW~Ylr~Ll~~~~~~ 258 (349)
T 3q7a_A 229 IYILKSIHLIPHNVSAWNYLRGFLKHFSLP 258 (349)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHhcCCC
Confidence 999999999999999999998888887764
No 162
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.72 E-value=8.1e-17 Score=123.88 Aligned_cols=126 Identities=19% Similarity=0.234 Sum_probs=117.9
Q ss_pred hHHHHHHHhHhHHHHhCCHHHHHHHHHHHHH----------------hcCCChHHHHHHHHHHHHccCcCchHHHHHHHH
Q psy17412 44 DIADHFKANGNKAFQSGQYEAALVQYDKAIE----------------QVRDSPVLYTNRALTLLHLQLYDPVLPDCDKAL 107 (240)
Q Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~----------------~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~ 107 (240)
..+..+..+|..++..|+|++|+..|+++++ ..|....++.++|.++..+|++++|+.++++++
T Consensus 221 ~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al 300 (370)
T 1ihg_A 221 LISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEAL 300 (370)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 4567899999999999999999999999999 677778999999999999999999999999999
Q ss_pred hcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhh
Q psy17412 108 RLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLP 180 (240)
Q Consensus 108 ~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 180 (240)
+++|+++.+++.+|.++..+|++++|+..|++++++.|++... +..++.++...++++++.+
T Consensus 301 ~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~-----------~~~l~~~~~~~~~~~~a~k 362 (370)
T 1ihg_A 301 EIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAI-----------QAELLKVKQKIKAQKDKEK 362 (370)
T ss_dssp TTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHHHHHHHHHH
T ss_pred HhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHH-----------HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998877 9999999999888877654
No 163
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=1e-16 Score=107.10 Aligned_cols=109 Identities=27% Similarity=0.423 Sum_probs=104.1
Q ss_pred chhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCC---hHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHH
Q psy17412 42 RQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDS---PVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHL 118 (240)
Q Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 118 (240)
.+..+..++.+|..++..|++++|+..|+++++.+|++ ..++..+|.++...|++++|+..+++++...|+++.+++
T Consensus 24 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 103 (148)
T 2dba_A 24 GASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALY 103 (148)
T ss_dssp TCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHH
T ss_pred chHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHH
Confidence 45678889999999999999999999999999999987 889999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCCchHH
Q psy17412 119 YKARAMHSLGQREEAKEYVRQLVEKYPTRRKL 150 (240)
Q Consensus 119 ~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 150 (240)
.+|.++..+|++++|+..++++++++|++...
T Consensus 104 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 135 (148)
T 2dba_A 104 RRSQALEKLGRLDQAVLDLQRCVSLEPKNKVF 135 (148)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHH
Confidence 99999999999999999999999999998777
No 164
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.72 E-value=3.2e-16 Score=120.76 Aligned_cols=176 Identities=12% Similarity=0.050 Sum_probs=145.9
Q ss_pred HHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCCh-----HHHHHHHHHHHHccCcCchHHHHHHHHhcCccc------
Q psy17412 45 IADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSP-----VLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN------ 113 (240)
Q Consensus 45 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~-----~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~------ 113 (240)
....+...|..+...|++++|+..+++++...|... .++..+|.++...|++++|...+++++...|..
T Consensus 13 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 92 (373)
T 1hz4_A 13 HAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYA 92 (373)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHH
Confidence 456778889999999999999999999999887553 267889999999999999999999999876533
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChh--
Q psy17412 114 MKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDED-- 191 (240)
Q Consensus 114 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~-- 191 (240)
..++..+|.++...|++++|+..+++++...+..... ..+.....+.++|.++...|++++|...+.+++...+.
T Consensus 93 ~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~---~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 169 (373)
T 1hz4_A 93 LWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLE---QLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQ 169 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCT---TSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccc---cCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccC
Confidence 2357889999999999999999999999875321000 00112345888999999999999999999999987654
Q ss_pred ---hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q psy17412 192 ---NMKAHLYKARAMHNLGQREEAKEYIRELVEKY 223 (240)
Q Consensus 192 ---~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~ 223 (240)
...++..+|.++...|++++|..++++++...
T Consensus 170 ~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~ 204 (373)
T 1hz4_A 170 PQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLL 204 (373)
T ss_dssp GGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 35678899999999999999999999998774
No 165
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.72 E-value=1.4e-16 Score=128.75 Aligned_cols=163 Identities=16% Similarity=0.153 Sum_probs=153.7
Q ss_pred HHHhchhHHHHHHHhHhHHHHhCC----------HHHHHHHHHHHHHhcCCChHHHHHHHHHHHHcc--CcCchHHHHHH
Q psy17412 38 ERKARQDIADHFKANGNKAFQSGQ----------YEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQ--LYDPVLPDCDK 105 (240)
Q Consensus 38 ~~~~~~~~~~~~~~~a~~~~~~~~----------~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~--~~~~A~~~~~~ 105 (240)
....+|+...+|..++.++...|+ ++++++.+++++..+|++..+|..++.+....+ +++++++.+.+
T Consensus 55 ~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k 134 (567)
T 1dce_A 55 ILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCAR 134 (567)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHH
T ss_pred HHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHH
Confidence 456789999999999999999988 999999999999999999999999999999999 56999999999
Q ss_pred HHhcCcccHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHh------------
Q psy17412 106 ALRLDEDNMKAHLYKARAMHSLG-QREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHL------------ 172 (240)
Q Consensus 106 ~~~~~~~~~~~~~~la~~~~~~~-~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~------------ 172 (240)
+++.+|.+..+|..++.+....| .+++++++++++++.+|.+..+ |..++.++...
T Consensus 135 ~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~sa-----------W~~r~~ll~~l~~~~~~~~~~~~ 203 (567)
T 1dce_A 135 FLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSS-----------WHYRSCLLPQLHPQPDSGPQGRL 203 (567)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHH-----------HHHHHHHHHHHSCCCCSSSCCSS
T ss_pred HHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccH-----------HHHHHHHHHhhcccccccccccc
Confidence 99999999999999999999999 9999999999999999999888 99999998885
Q ss_pred --cccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHH
Q psy17412 173 --QLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREE 211 (240)
Q Consensus 173 --~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~ 211 (240)
+.++++++++.+++..+|++..+|+.++.++...|++++
T Consensus 204 ~~~~~~eel~~~~~ai~~~P~~~saW~y~~~ll~~~~~~~~ 244 (567)
T 1dce_A 204 PENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAEPHDV 244 (567)
T ss_dssp CHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHSCCCCCSC
T ss_pred cHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHhcCCCccc
Confidence 667899999999999999999999999999999888655
No 166
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.72 E-value=2.9e-16 Score=102.50 Aligned_cols=115 Identities=15% Similarity=0.117 Sum_probs=90.0
Q ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChh
Q psy17412 112 DNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDED 191 (240)
Q Consensus 112 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~ 191 (240)
..+..++.+|.++...|++++|+..++++++..|.+... +..+|.++...|++++|+.+++++++..|.
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~-----------~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 70 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTY-----------ITNQAAVYFEKGDYNKCRELCEKAIEVGRE 70 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHH-----------HHHHHHHHHHhccHHHHHHHHHHHHhhccc
Confidence 345667778888888888888888888888887776666 778888888888888888888888887776
Q ss_pred h-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhh
Q psy17412 192 N-------MKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFE 238 (240)
Q Consensus 192 ~-------~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 238 (240)
+ ..++..+|.++...|++++|+.+|++++...| ++..+..++.+..
T Consensus 71 ~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~ 123 (131)
T 1elr_A 71 NREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEK 123 (131)
T ss_dssp STTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHH
Confidence 6 77888888888888888888888888888887 5676766666543
No 167
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.71 E-value=6.4e-19 Score=139.99 Aligned_cols=136 Identities=14% Similarity=0.049 Sum_probs=122.0
Q ss_pred hHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCch
Q psy17412 80 PVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSP 159 (240)
Q Consensus 80 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~ 159 (240)
+..+..+|.++...|++++|+..|+++++.+|++..++..+|.++..+|++++|+..++++++++|++...
T Consensus 6 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~--------- 76 (477)
T 1wao_1 6 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKG--------- 76 (477)
T ss_dssp HTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHH---------
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHH---------
Confidence 45667788899999999999999999999999999999999999999999999999999999999998887
Q ss_pred HHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHH--HHHcCCHHHHHHHHH-----------HHHHhCCCc
Q psy17412 160 VLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARA--MHNLGQREEAKEYIR-----------ELVEKYPTR 226 (240)
Q Consensus 160 ~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~--~~~~g~~~~A~~~~~-----------~~~~~~p~~ 226 (240)
+.++|.++...|++++|+..++++++.+|++..++..++.+ +...|++++|+..++ +++...|+.
T Consensus 77 --~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 77 --YYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp --HHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred --HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 99999999999999999999999999999999999999988 889999999999999 777776654
No 168
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.71 E-value=4e-17 Score=103.71 Aligned_cols=104 Identities=16% Similarity=0.188 Sum_probs=53.6
Q ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcCh
Q psy17412 111 EDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDE 190 (240)
Q Consensus 111 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~ 190 (240)
|+++.++..+|.++...|++++|+..++++++..|.+... +..+|.++...|++++|+..++++++.+|
T Consensus 3 p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~-----------~~~~a~~~~~~~~~~~A~~~~~~a~~~~~ 71 (112)
T 2kck_A 3 DQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKY-----------WLMKGKALYNLERYEEAVDCYNYVINVIE 71 (112)
T ss_dssp CSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHH-----------HHHHHHHHHHTTCHHHHHHHHHHHHHTSC
T ss_pred CCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHH-----------HHHHHHHHHHccCHHHHHHHHHHHHHhCc
Confidence 3444444455555555555555555555555555544443 55555555555555555555555555555
Q ss_pred h--hHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCCC
Q psy17412 191 D--NMKAHLYKARAMHNL-GQREEAKEYIRELVEKYPT 225 (240)
Q Consensus 191 ~--~~~~~~~la~~~~~~-g~~~~A~~~~~~~~~~~p~ 225 (240)
. +..++..+|.++..+ |++++|+.++++++...|.
T Consensus 72 ~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~ 109 (112)
T 2kck_A 72 DEYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHH 109 (112)
T ss_dssp CTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCC
T ss_pred ccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccC
Confidence 5 555555555555555 5555555555555555544
No 169
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.69 E-value=2.4e-16 Score=104.71 Aligned_cols=94 Identities=16% Similarity=0.156 Sum_probs=87.0
Q ss_pred HHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcC----------chHHHHHHHHhcCcccHHHHHHHHHHHHH
Q psy17412 57 FQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYD----------PVLPDCDKALRLDEDNMKAHLYKARAMHS 126 (240)
Q Consensus 57 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~----------~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 126 (240)
-+.+.|++|+..++++++.+|+++.+|.++|.++...++++ +|+..|+++++++|++..+++++|.+|..
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~ 92 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999998875 99999999999999999999999999998
Q ss_pred cC-----------CHHHHHHHHHHHHHcCCCchHH
Q psy17412 127 LG-----------QREEAKEYVRQLVEKYPTRRKL 150 (240)
Q Consensus 127 ~~-----------~~~~A~~~~~~a~~~~~~~~~~ 150 (240)
+| ++++|+.+|+++++++|++...
T Consensus 93 lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y 127 (158)
T 1zu2_A 93 FAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHY 127 (158)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHH
T ss_pred hcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHH
Confidence 85 8999999999999999986543
No 170
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.69 E-value=1.1e-16 Score=101.63 Aligned_cols=104 Identities=17% Similarity=0.167 Sum_probs=56.3
Q ss_pred CCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC--chHHHHHh
Q psy17412 77 RDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPT--RRKLAIEQ 154 (240)
Q Consensus 77 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~--~~~~~~~~ 154 (240)
|+++.++..+|.++...|++++|+..++++++..|.+..++..+|.++...|++++|+..++++++..|. +...
T Consensus 3 p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~---- 78 (112)
T 2kck_A 3 DQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDV---- 78 (112)
T ss_dssp CSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHH----
T ss_pred CCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHH----
Confidence 4444555555555555555555555555555555555555555555555555555555555555555555 4444
Q ss_pred ccCchHHHHHHHHHHHHh-cccCchhhHHHHHhhcChh
Q psy17412 155 VRDSPVLYTNRALTLLHL-QLYDPVLPDCDKALRLDED 191 (240)
Q Consensus 155 ~~~~~~~~~~la~~~~~~-~~~~~A~~~~~~~l~~~~~ 191 (240)
+..+|.++... |++++|++++++++...|.
T Consensus 79 -------~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~ 109 (112)
T 2kck_A 79 -------WAAKADALRYIEGKEVEAEIAEARAKLEHHH 109 (112)
T ss_dssp -------HHHHHHHHTTCSSCSHHHHHHHHHHGGGCCC
T ss_pred -------HHHHHHHHHHHhCCHHHHHHHHHHHhhcccC
Confidence 55555555555 5555555555555555443
No 171
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.69 E-value=2.7e-16 Score=121.00 Aligned_cols=125 Identities=17% Similarity=0.181 Sum_probs=111.6
Q ss_pred hHHHHHHHHHHHHccCcCchHHHHHHHHh----------------cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Q psy17412 80 PVLYTNRALTLLHLQLYDPVLPDCDKALR----------------LDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEK 143 (240)
Q Consensus 80 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~----------------~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 143 (240)
...+..+|..++..|++++|+..|+++++ ..|....++.++|.++..+|++++|+.++++++++
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 45688899999999999999999999998 67777889999999999999999999999999999
Q ss_pred CCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHH
Q psy17412 144 YPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEY 215 (240)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 215 (240)
+|++... ++.+|.++...|++++|+..|+++++++|++..++..++.++..+++.+++...
T Consensus 303 ~p~~~~a-----------~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 303 DPSNTKA-----------LYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp CTTCHHH-----------HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CchhHHH-----------HHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988777 999999999999999999999999999999999999999999888888877653
No 172
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.69 E-value=5.1e-17 Score=104.55 Aligned_cols=93 Identities=17% Similarity=0.213 Sum_probs=85.2
Q ss_pred HhCCHHHHHHHHHHHHHh---cCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHH
Q psy17412 58 QSGQYEAALVQYDKAIEQ---VRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAK 134 (240)
Q Consensus 58 ~~~~~~~A~~~~~~a~~~---~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~ 134 (240)
..|++++|+..|+++++. +|+++.++..+|.++...|++++|+..++++++.+|+++.+++.+|.++..+|++++|+
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHH
Confidence 468999999999999999 68899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCchHH
Q psy17412 135 EYVRQLVEKYPTRRKL 150 (240)
Q Consensus 135 ~~~~~a~~~~~~~~~~ 150 (240)
..+++++...|+++..
T Consensus 82 ~~~~~al~~~p~~~~~ 97 (117)
T 3k9i_A 82 ELLLKIIAETSDDETI 97 (117)
T ss_dssp HHHHHHHHHHCCCHHH
T ss_pred HHHHHHHHhCCCcHHH
Confidence 9999999999998766
No 173
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.68 E-value=1.1e-16 Score=102.97 Aligned_cols=98 Identities=21% Similarity=0.264 Sum_probs=81.1
Q ss_pred HccCcCchHHHHHHHHhc---CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHH
Q psy17412 92 HLQLYDPVLPDCDKALRL---DEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALT 168 (240)
Q Consensus 92 ~~~~~~~A~~~~~~~~~~---~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~ 168 (240)
..|++++|+..|+++++. +|+++.++..+|.++..+|++++|+..++++++.+|+++.. +..+|.+
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~-----------~~~l~~~ 70 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQAL-----------RVFYAMV 70 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHH-----------HHHHHHH
Confidence 468899999999999998 58888899999999999999999999999999999988777 8999999
Q ss_pred HHHhcccCchhhHHHHHhhcChhhHHHHHHHH
Q psy17412 169 LLHLQLYDPVLPDCDKALRLDEDNMKAHLYKA 200 (240)
Q Consensus 169 ~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la 200 (240)
+...|++++|+..++++++..|+++.+.....
T Consensus 71 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ 102 (117)
T 3k9i_A 71 LYNLGRYEQGVELLLKIIAETSDDETIQSYKQ 102 (117)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 99999999999999999998888877654333
No 174
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.68 E-value=3.2e-15 Score=115.22 Aligned_cols=174 Identities=11% Similarity=0.046 Sum_probs=130.2
Q ss_pred HHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCCh------HHHHHHHHHHHHccCcCchHHHHHHHHhcC--------c
Q psy17412 46 ADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSP------VLYTNRALTLLHLQLYDPVLPDCDKALRLD--------E 111 (240)
Q Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~------~~~~~la~~~~~~~~~~~A~~~~~~~~~~~--------~ 111 (240)
...+..+|..+...|++++|...+++++...|... .++..+|.++...|++++|+..+++++... |
T Consensus 53 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~ 132 (373)
T 1hz4_A 53 IVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLP 132 (373)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTST
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCc
Confidence 44678889999999999999999999998766442 346788999999999999999999998764 3
Q ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChh
Q psy17412 112 DNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDED 191 (240)
Q Consensus 112 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~ 191 (240)
....++..+|.++...|++++|..++++++...+..... .....+..+|.++...|++++|...+++++...+.
T Consensus 133 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~------~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~ 206 (373)
T 1hz4_A 133 MHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQ------QQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGN 206 (373)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGG------GGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcH------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc
Confidence 345677889999999999999999999999887763211 12345778888888888888888888888765322
Q ss_pred --h-HH--HH--HHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q psy17412 192 --N-MK--AH--LYKARAMHNLGQREEAKEYIRELVEKYPT 225 (240)
Q Consensus 192 --~-~~--~~--~~la~~~~~~g~~~~A~~~~~~~~~~~p~ 225 (240)
. .. .. ..++.++...|++++|..++++++...|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~ 247 (373)
T 1hz4_A 207 GKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFA 247 (373)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCT
T ss_pred cCcchhHHHHHHHHHHHHHHHCCCHHHHHHHHHhCCCCCCC
Confidence 1 11 11 13445577888888888888887766654
No 175
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.68 E-value=1.3e-15 Score=120.45 Aligned_cols=171 Identities=13% Similarity=0.074 Sum_probs=139.8
Q ss_pred HHHHHHHhHhHHHHhCCHHHH----HHHHHHHHHhcCCChHHHHHHHHHHHHcc---CcCchHHHHHHHHhcCcccHHHH
Q psy17412 45 IADHFKANGNKAFQSGQYEAA----LVQYDKAIEQVRDSPVLYTNRALTLLHLQ---LYDPVLPDCDKALRLDEDNMKAH 117 (240)
Q Consensus 45 ~~~~~~~~a~~~~~~~~~~~A----~~~~~~a~~~~~~~~~~~~~la~~~~~~~---~~~~A~~~~~~~~~~~~~~~~~~ 117 (240)
.+.+++.+|.++...+.++++ ..+++.+...+ +.+++.+|.+|...| ++++|+..|+++.+..|.....+
T Consensus 140 ~~~a~~~Lg~~y~~~~~~~~~~~~a~~~~~~a~~~~---~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~ 216 (452)
T 3e4b_A 140 YPEAGLAQVLLYRTQGTYDQHLDDVERICKAALNTT---DICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRV 216 (452)
T ss_dssp CTTHHHHHHHHHHHHTCGGGGHHHHHHHHHHHTTTC---TTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHH
T ss_pred CHHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHcCC---HHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHH
Confidence 456777777777777744443 33444443333 448889999999999 99999999999999999888888
Q ss_pred HHHHHHHHHc----CCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHH-H--HHhcccCchhhHHHHHhhcCh
Q psy17412 118 LYKARAMHSL----GQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALT-L--LHLQLYDPVLPDCDKALRLDE 190 (240)
Q Consensus 118 ~~la~~~~~~----~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~-~--~~~~~~~~A~~~~~~~l~~~~ 190 (240)
+.+|.++... +++++|+.+|+++. |.++.. ++++|.+ + ...+++++|+.+|+++.+.
T Consensus 217 ~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a-----------~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~-- 280 (452)
T 3e4b_A 217 DSVARVLGDATLGTPDEKTAQALLEKIA---PGYPAS-----------WVSLAQLLYDFPELGDVEQMMKYLDNGRAA-- 280 (452)
T ss_dssp HHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHH-----------HHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--
T ss_pred HHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHH-----------HHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--
Confidence 9999998765 78999999999987 777666 9999998 4 4678999999999999865
Q ss_pred hhHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHHhCCCcHHHHHHHHHhhh
Q psy17412 191 DNMKAHLYKARAMHNLG-----QREEAKEYIRELVEKYPTRRKLVENYTQAFE 238 (240)
Q Consensus 191 ~~~~~~~~la~~~~~~g-----~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 238 (240)
.++.+++.+|.+|. .| ++++|+.+|+++. +.++.+...++.++.
T Consensus 281 g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~ 329 (452)
T 3e4b_A 281 DQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIYR 329 (452)
T ss_dssp TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHH
Confidence 47889999999998 66 9999999999988 889999999998875
No 176
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.68 E-value=3e-16 Score=104.19 Aligned_cols=100 Identities=14% Similarity=0.207 Sum_probs=92.1
Q ss_pred HHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccC----------chhhHHHHHhhcChhhHH
Q psy17412 125 HSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYD----------PVLPDCDKALRLDEDNMK 194 (240)
Q Consensus 125 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~----------~A~~~~~~~l~~~~~~~~ 194 (240)
.+.+.+++|+..++++++++|+++.. +.++|.++...++++ +|+..|+++++++|++..
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~~aea-----------~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~ 81 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPLDADN-----------LTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDE 81 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCCCHHH-----------HHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHH
Confidence 45678999999999999999999888 999999999998875 999999999999999999
Q ss_pred HHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q psy17412 195 AHLYKARAMHNLG-----------QREEAKEYIRELVEKYPTRRKLVENYTQ 235 (240)
Q Consensus 195 ~~~~la~~~~~~g-----------~~~~A~~~~~~~~~~~p~~~~~~~~l~~ 235 (240)
+++++|.+|..+| ++++|+.+|+++++++|++...+..+..
T Consensus 82 A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~ 133 (158)
T 1zu2_A 82 AVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEM 133 (158)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 9999999999885 8999999999999999999887776654
No 177
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.68 E-value=1.7e-16 Score=107.41 Aligned_cols=100 Identities=15% Similarity=0.213 Sum_probs=64.3
Q ss_pred hHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCCh------HHHHHHHHHHHHccCcCchHHHHHHHHhcCccc----
Q psy17412 44 DIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSP------VLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN---- 113 (240)
Q Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~------~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~---- 113 (240)
..+..+..+|..+...|++++|+.++++++...+... .++..+|.++...|++++|+..+++++...+..
T Consensus 7 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 86 (164)
T 3ro3_A 7 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRA 86 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcH
Confidence 4566778888888888888888888888887755322 356666666666666666666666666544321
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Q psy17412 114 --MKAHLYKARAMHSLGQREEAKEYVRQLVEK 143 (240)
Q Consensus 114 --~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 143 (240)
..++..+|.++...|++++|+.+++++++.
T Consensus 87 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 118 (164)
T 3ro3_A 87 VEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAI 118 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 344555555555556666665555555544
No 178
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.66 E-value=8.4e-16 Score=103.96 Aligned_cols=141 Identities=17% Similarity=0.100 Sum_probs=119.0
Q ss_pred hHHHHHHHHHHHHccCcCchHHHHHHHHhcCccc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHH
Q psy17412 80 PVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN------MKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIE 153 (240)
Q Consensus 80 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 153 (240)
..++..+|.++...|++++|+..+++++...+.. ..++..+|.++...|++++|+.++++++++.+.....
T Consensus 9 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~--- 85 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR--- 85 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH---
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc---
Confidence 5678899999999999999999999999876543 2488999999999999999999999999876542111
Q ss_pred hccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcCh------hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q psy17412 154 QVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDE------DNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPT 225 (240)
Q Consensus 154 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~------~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~ 225 (240)
+....++..+|.++...|++++|+.+++++++..+ ....++..+|.++...|++++|+.++++++++...
T Consensus 86 --~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 86 --AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp --HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred --HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 11245689999999999999999999999987743 23677899999999999999999999999987544
No 179
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.66 E-value=8.9e-15 Score=125.37 Aligned_cols=175 Identities=14% Similarity=0.094 Sum_probs=141.9
Q ss_pred hchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcc--------
Q psy17412 41 ARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDED-------- 112 (240)
Q Consensus 41 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-------- 112 (240)
+....+.+|+.+|..+...|++++|++.|.++ +++..+..+|.++.+.|++++|++++..+.+..++
T Consensus 1100 ervn~p~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~La 1174 (1630)
T 1xi4_A 1100 ERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELI 1174 (1630)
T ss_pred HhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHH
Confidence 34567889999999999999999999999776 77888999999999999999999999887654422
Q ss_pred -------------------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhc
Q psy17412 113 -------------------NMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQ 173 (240)
Q Consensus 113 -------------------~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 173 (240)
+...+..+|..+...|+|++|..+|.++ + . |..+|.++.++|
T Consensus 1175 faYAKl~rleele~fI~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA----~----n-----------y~rLA~tLvkLg 1235 (1630)
T 1xi4_A 1175 FALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNV----S----N-----------FGRLASTLVHLG 1235 (1630)
T ss_pred HHHHhhcCHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHHHHHHHHhh----h----H-----------HHHHHHHHHHhC
Confidence 1234566888888888888888888875 1 2 899999999999
Q ss_pred ccCchhhHHHHHhhcCh-------------------------hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH
Q psy17412 174 LYDPVLPDCDKALRLDE-------------------------DNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRK 228 (240)
Q Consensus 174 ~~~~A~~~~~~~l~~~~-------------------------~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~ 228 (240)
++++|++.+.++....+ .+++.+..++..|...|.+++|+.++++++.+++.+..
T Consensus 1236 e~q~AIEaarKA~n~~aWkev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~g 1315 (1630)
T 1xi4_A 1236 EYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMG 1315 (1630)
T ss_pred CHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhH
Confidence 99999999988855433 12344557788899999999999999999999999999
Q ss_pred HHHHHHHhhhc
Q psy17412 229 LVENYTQAFEQ 239 (240)
Q Consensus 229 ~~~~l~~~~~~ 239 (240)
.+..++.++.+
T Consensus 1316 mftELaiLyaK 1326 (1630)
T 1xi4_A 1316 MFTELAILYSK 1326 (1630)
T ss_pred HHHHHHHHHHh
Confidence 99888877653
No 180
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.64 E-value=1.1e-15 Score=107.51 Aligned_cols=143 Identities=7% Similarity=-0.079 Sum_probs=120.6
Q ss_pred hHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHh------cCCChHHHHHHHHHHHHccCcCchHHHHHHHHhc------Cc
Q psy17412 44 DIADHFKANGNKAFQSGQYEAALVQYDKAIEQ------VRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRL------DE 111 (240)
Q Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~------~~ 111 (240)
..+..+..+|.++...|++++|+..+++++.. .+....++..+|.++...|++++|+..+++++.. .+
T Consensus 24 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 103 (203)
T 3gw4_A 24 TASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDP 103 (203)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccH
Confidence 67889999999999999999999999999994 3445678999999999999999999999999987 33
Q ss_pred -ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcCh
Q psy17412 112 -DNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDE 190 (240)
Q Consensus 112 -~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~ 190 (240)
....++..+|.++..+|++++|+.++++++.+.+..... ......+..+|.++...|++++|+..+++++++..
T Consensus 104 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~-----~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 104 LAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQ-----VAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH-----HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccch-----HHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 345679999999999999999999999999864321111 11234578999999999999999999999998754
Q ss_pred h
Q psy17412 191 D 191 (240)
Q Consensus 191 ~ 191 (240)
.
T Consensus 179 ~ 179 (203)
T 3gw4_A 179 E 179 (203)
T ss_dssp H
T ss_pred H
Confidence 4
No 181
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.64 E-value=8.6e-15 Score=109.24 Aligned_cols=158 Identities=13% Similarity=0.064 Sum_probs=126.2
Q ss_pred cCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccH------HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchH
Q psy17412 76 VRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNM------KAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRK 149 (240)
Q Consensus 76 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~------~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 149 (240)
.|.....+...+..+...|++++|++.+.+++...+... ..++.+|.++...|++++|+..++++++..+....
T Consensus 71 ~~~~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~ 150 (293)
T 2qfc_A 71 DIERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGID 150 (293)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSC
T ss_pred chhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCc
Confidence 344456677888999999999999999999998776543 35677899999999999999999999987665321
Q ss_pred HHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhh---cChhh----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q psy17412 150 LAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALR---LDEDN----MKAHLYKARAMHNLGQREEAKEYIRELVEK 222 (240)
Q Consensus 150 ~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~---~~~~~----~~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 222 (240)
. .....++.++|.+|...|++++|+.+++++++ ..|++ ..++.++|.++..+|++++|+.++++++..
T Consensus 151 ~-----~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~ 225 (293)
T 2qfc_A 151 V-----YQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEI 225 (293)
T ss_dssp T-----THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred h-----HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 1 01234699999999999999999999999994 34432 368999999999999999999999999987
Q ss_pred CCC------cHHHHHHHHHhhh
Q psy17412 223 YPT------RRKLVENYTQAFE 238 (240)
Q Consensus 223 ~p~------~~~~~~~l~~~~~ 238 (240)
.+. ...++..++.++.
T Consensus 226 ~~~~~~~~~~~~~~~~lg~~y~ 247 (293)
T 2qfc_A 226 SCRINSMALIGQLYYQRGECLR 247 (293)
T ss_dssp HHHTTBCSSHHHHHHHHHHHHH
T ss_pred HHhcCcHHHHHHHHHHHHHHHH
Confidence 542 1566777777654
No 182
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.64 E-value=1.4e-15 Score=113.54 Aligned_cols=137 Identities=15% Similarity=0.057 Sum_probs=113.7
Q ss_pred HHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCC------hHHHHHHHHHHHHccCcCchHHHHHHHHhc-------CcccH
Q psy17412 48 HFKANGNKAFQSGQYEAALVQYDKAIEQVRDS------PVLYTNRALTLLHLQLYDPVLPDCDKALRL-------DEDNM 114 (240)
Q Consensus 48 ~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~-------~~~~~ 114 (240)
.+..+|..+...+++++|+.+|++++...+.. ..++.++|.+|...|++++|+.+|+++++. .+...
T Consensus 117 ~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 196 (293)
T 3u3w_A 117 WQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDV 196 (293)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHH
T ss_pred HHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHH
Confidence 44468999999999999999999999975433 337899999999999999999999999942 23445
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcc-cCchhhHHHHHhhcC
Q psy17412 115 KAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQL-YDPVLPDCDKALRLD 189 (240)
Q Consensus 115 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-~~~A~~~~~~~l~~~ 189 (240)
.+++++|.++..+|++++|+.++++++++.+... .....+.++.++|.++...|+ +++|+.++++++.+.
T Consensus 197 ~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~-----~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEISCRIN-----SMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-----BCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcC-----cHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999998765431 112235669999999999995 599999999998764
No 183
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.61 E-value=3.2e-15 Score=117.32 Aligned_cols=172 Identities=10% Similarity=0.029 Sum_probs=142.0
Q ss_pred HHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCCh-----------------HHHHHHHHHHHHccCcCchHHHHHHHHhc
Q psy17412 47 DHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSP-----------------VLYTNRALTLLHLQLYDPVLPDCDKALRL 109 (240)
Q Consensus 47 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~-----------------~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 109 (240)
.+.+..|..+...|+|++|++.|.++++..|... .++..+|.+|...|++++|.+.+.+++..
T Consensus 5 ~~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~ 84 (434)
T 4b4t_Q 5 GSKLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEY 84 (434)
T ss_dssp THHHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 3456778889999999999999999999877642 35789999999999999999999999876
Q ss_pred Cccc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHH
Q psy17412 110 DEDN------MKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCD 183 (240)
Q Consensus 110 ~~~~------~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 183 (240)
.+.. ..+...+|.++...|++++|+..+++++...+... .......++.++|.++...|+|++|+..+.
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~-----~~~~~~~~~~~la~~~~~~g~~~~A~~~l~ 159 (434)
T 4b4t_Q 85 MMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREK-----RVFLKHSLSIKLATLHYQKKQYKDSLALIN 159 (434)
T ss_dssp HHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSS-----CCSSHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhC-----ccHHHHHHHHHHHHHHHHccChHHHHHHHH
Confidence 5432 23566778888889999999999999987644321 112234568999999999999999999999
Q ss_pred HHhhc------ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q psy17412 184 KALRL------DEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKY 223 (240)
Q Consensus 184 ~~l~~------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~ 223 (240)
+++.. .+....++..+|.++..+|++++|..++++++...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 205 (434)
T 4b4t_Q 160 DLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAA 205 (434)
T ss_dssp HHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHh
Confidence 98764 34567899999999999999999999999998764
No 184
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.59 E-value=5.7e-14 Score=103.89 Aligned_cols=158 Identities=11% Similarity=0.043 Sum_probs=127.4
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCc--ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17412 65 ALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDE--DNMKAHLYKARAMHSLGQREEAKEYVRQLVE 142 (240)
Q Consensus 65 A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~--~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 142 (240)
|+..+++.+...+.+...+..+|.++...|++++|+..+.+.+..+| .+.+++..++.++..+|+.+.|.+.+++..+
T Consensus 85 a~~~l~~l~~~~~~~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~ 164 (310)
T 3mv2_B 85 NIEELENLLKDKQNSPYELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTN 164 (310)
T ss_dssp CCHHHHHTTTTSCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 55666666665555566778999999999999999999999999887 8899999999999999999999999999999
Q ss_pred cCCC-----chHHHHHhccCchHHHHHHHHHHHHhc--ccCchhhHHHHHhhcChh--hHHHHHHHHHHHHHcCCHHHHH
Q psy17412 143 KYPT-----RRKLAIEQVRDSPVLYTNRALTLLHLQ--LYDPVLPDCDKALRLDED--NMKAHLYKARAMHNLGQREEAK 213 (240)
Q Consensus 143 ~~~~-----~~~~~~~~~~~~~~~~~~la~~~~~~~--~~~~A~~~~~~~l~~~~~--~~~~~~~la~~~~~~g~~~~A~ 213 (240)
.+|+ +... +...-|.+....| ++.+|...|+++.+..|+ ....+++ +++.+|++++|.
T Consensus 165 ~~~d~~~~~d~~l----------~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe 231 (310)
T 3mv2_B 165 AIEDTVSGDNEMI----------LNLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQ 231 (310)
T ss_dssp HSCHHHHHHHHHH----------HHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHH
T ss_pred cCccccccchHHH----------HHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHH
Confidence 9883 2211 1333344466666 999999999999998887 3334444 899999999999
Q ss_pred HHHHHHHHh----------CCCcHHHHHHHHH
Q psy17412 214 EYIRELVEK----------YPTRRKLVENYTQ 235 (240)
Q Consensus 214 ~~~~~~~~~----------~p~~~~~~~~l~~ 235 (240)
..++.+++. +|+++++..++..
T Consensus 232 ~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~ 263 (310)
T 3mv2_B 232 GIVELLLSDYYSVEQKENAVLYKPTFLANQIT 263 (310)
T ss_dssp HHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHH
T ss_pred HHHHHHHHhcccccccccCCCCCHHHHHHHHH
Confidence 999987776 4889998866643
No 185
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.55 E-value=2.1e-15 Score=95.75 Aligned_cols=95 Identities=26% Similarity=0.403 Sum_probs=88.4
Q ss_pred HHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCccc------HHHHH
Q psy17412 45 IADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN------MKAHL 118 (240)
Q Consensus 45 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~ 118 (240)
.+..+..+|..++..|++++|+..|++++..+|+++.++.++|.++...|++++|+..+++++.++|++ ..+++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 82 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQY 82 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 567899999999999999999999999999999999999999999999999999999999999999998 88999
Q ss_pred HHHHHHHHcCCHHHHHHHHHH
Q psy17412 119 YKARAMHSLGQREEAKEYVRQ 139 (240)
Q Consensus 119 ~la~~~~~~~~~~~A~~~~~~ 139 (240)
.+|.++..+|+++.|+..+++
T Consensus 83 ~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 83 RLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHHhHhhhHhHHHH
Confidence 999999999988877665543
No 186
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.55 E-value=1e-14 Score=92.47 Aligned_cols=102 Identities=16% Similarity=0.075 Sum_probs=88.9
Q ss_pred ChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCc
Q psy17412 79 SPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDS 158 (240)
Q Consensus 79 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 158 (240)
++..+..+|.++...|++++|+..|+++++.+|+++.++..+|.++..+|++++|+..++++++++|++... ...
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~-----~~~ 77 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHV-----AIR 77 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSH-----HHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHH-----HHH
Confidence 356789999999999999999999999999999999999999999999999999999999999999997111 001
Q ss_pred hHHHHHHHHHHHHhcccCchhhHHHHH
Q psy17412 159 PVLYTNRALTLLHLQLYDPVLPDCDKA 185 (240)
Q Consensus 159 ~~~~~~la~~~~~~~~~~~A~~~~~~~ 185 (240)
..++..+|.++...|+++.|+..+++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~a~~~~~~~ 104 (111)
T 2l6j_A 78 SKLQYRLELAQGAVGSVQIPVVEVDEL 104 (111)
T ss_dssp HHHHHHHHHHHHHHHCCCCCSSSSSSC
T ss_pred HHHHHHHHHHHHHHHhHhhhHhHHHHh
Confidence 223899999999999999998877654
No 187
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=99.53 E-value=6.1e-13 Score=109.24 Aligned_cols=187 Identities=6% Similarity=-0.057 Sum_probs=149.9
Q ss_pred HHHhchhHHHHHHHhHhHHHHhCCHHHHH-HHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcC------
Q psy17412 38 ERKARQDIADHFKANGNKAFQSGQYEAAL-VQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLD------ 110 (240)
Q Consensus 38 ~~~~~~~~~~~~~~~a~~~~~~~~~~~A~-~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~------ 110 (240)
.....|..+..|+..+......|+.++|. ..|++++...|.+..+|...+......|++++|...|++++...
T Consensus 335 aL~~~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~ 414 (679)
T 4e6h_A 335 AAQHVCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAA 414 (679)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhh
Confidence 45667888999999999999999999997 99999999999999999999999999999999999999998752
Q ss_pred -----cc-----------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-CCCchHHHHHhccCchHHHHHHHHHHHHhc
Q psy17412 111 -----ED-----------NMKAHLYKARAMHSLGQREEAKEYVRQLVEK-YPTRRKLAIEQVRDSPVLYTNRALTLLHLQ 173 (240)
Q Consensus 111 -----~~-----------~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 173 (240)
|. ...+|...+.+..+.|+.+.|...|.++++. .+..... +...|.+..+.+
T Consensus 415 ~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~l-----------yi~~A~lE~~~~ 483 (679)
T 4e6h_A 415 LMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDI-----------YLENAYIEYHIS 483 (679)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHH-----------HHHHHHHHHTTT
T ss_pred hhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHH-----------HHHHHHHHHHhC
Confidence 32 3457888888889999999999999999987 3333333 666666665554
Q ss_pred -ccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---cHHHHHHHHH
Q psy17412 174 -LYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPT---RRKLVENYTQ 235 (240)
Q Consensus 174 -~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~---~~~~~~~l~~ 235 (240)
+++.|...|+++++..|+++..|...+......|+.+.|...|++++...|+ ...+|..+.+
T Consensus 484 ~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~ 549 (679)
T 4e6h_A 484 KDTKTACKVLELGLKYFATDGEYINKYLDFLIYVNEESQVKSLFESSIDKISDSHLLKMIFQKVIF 549 (679)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 4788888888888888888888877888778888888888888888887763 3445544443
No 188
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.53 E-value=1.3e-13 Score=88.05 Aligned_cols=83 Identities=14% Similarity=0.058 Sum_probs=46.2
Q ss_pred chHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCc
Q psy17412 98 PVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDP 177 (240)
Q Consensus 98 ~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~ 177 (240)
+|+..|+++++.+|+++.+++.+|.++...|++++|+..++++++.+|++... +..+|.++...|++++
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~-----------~~~la~~~~~~g~~~~ 71 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVA-----------WKWLGKTLQGQGDRAG 71 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHH-----------HHHHHHHHHHcCCHHH
Confidence 44555555555555555555555555555555555555555555555555444 5555555555555555
Q ss_pred hhhHHHHHhhcChh
Q psy17412 178 VLPDCDKALRLDED 191 (240)
Q Consensus 178 A~~~~~~~l~~~~~ 191 (240)
|+..|+++++..|.
T Consensus 72 A~~~~~~al~~~~~ 85 (115)
T 2kat_A 72 ARQAWESGLAAAQS 85 (115)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccc
Confidence 55555555555543
No 189
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.52 E-value=3e-14 Score=109.86 Aligned_cols=168 Identities=11% Similarity=0.070 Sum_probs=81.9
Q ss_pred hHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCC---------------------------ChHHHHHHHHHHHHccCc
Q psy17412 44 DIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRD---------------------------SPVLYTNRALTLLHLQLY 96 (240)
Q Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~---------------------------~~~~~~~la~~~~~~~~~ 96 (240)
++...+...+..+...|+|++|+.+++.+.+..++ +...|..+|..+...|+|
T Consensus 59 ~D~~~y~~V~~~ae~~g~~EeAi~yl~~ark~~~~~~i~~~Li~~Y~Klg~l~e~e~f~~~pn~~a~~~IGd~~~~~g~y 138 (449)
T 1b89_A 59 DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMY 138 (449)
T ss_dssp --------------------------------------------------CHHHHTTTTTCC----------------CT
T ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCccchhHHHHHHHHHHhCCHHHHHHHHcCCcHHHHHHHHHHHHHcCCH
Confidence 34556677777777777777777777776654222 123556666666666666
Q ss_pred CchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccC
Q psy17412 97 DPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYD 176 (240)
Q Consensus 97 ~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 176 (240)
++|..+|.++ ..|..+|.++.++|++++|++.++++ +++.. |...+.++...|+++
T Consensus 139 eeA~~~Y~~a--------~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~-----------Wk~v~~aCv~~~ef~ 194 (449)
T 1b89_A 139 DAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKA-----NSTRT-----------WKEVCFACVDGKEFR 194 (449)
T ss_dssp TTHHHHHHHT--------TCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHH-----------HHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHh--------hhHHHHHHHHHHhccHHHHHHHHHHc-----CCchh-----------HHHHHHHHHHcCcHH
Confidence 6666666654 24566666666666666666666666 23333 666666666666666
Q ss_pred chhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhhc
Q psy17412 177 PVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFEQ 239 (240)
Q Consensus 177 ~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 239 (240)
.|..+... +..+|++ ...++.+|.+.|++++|+.++++++.+++.+..++..++.++.+
T Consensus 195 lA~~~~l~-L~~~ad~---l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~k 253 (449)
T 1b89_A 195 LAQMCGLH-IVVHADE---LEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSK 253 (449)
T ss_dssp HHHHTTTT-TTTCHHH---HHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHT
T ss_pred HHHHHHHH-HHhCHhh---HHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHh
Confidence 66555544 3345544 33577889999999999999999999999999999999887754
No 190
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.51 E-value=2.9e-13 Score=82.47 Aligned_cols=86 Identities=26% Similarity=0.351 Sum_probs=81.2
Q ss_pred hhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHH
Q psy17412 43 QDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKAR 122 (240)
Q Consensus 43 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 122 (240)
+..+..++.+|..+...|++++|+..|++++..+|+++.++..+|.++...|++++|+..+++++..+|+++.++..+|.
T Consensus 6 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 85 (91)
T 1na3_A 6 GNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 85 (91)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcC
Q psy17412 123 AMHSLG 128 (240)
Q Consensus 123 ~~~~~~ 128 (240)
++..+|
T Consensus 86 ~~~~~g 91 (91)
T 1na3_A 86 AKQKQG 91 (91)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 987764
No 191
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.51 E-value=4.6e-12 Score=109.03 Aligned_cols=155 Identities=17% Similarity=0.172 Sum_probs=125.6
Q ss_pred hHhHHHHhCCHHHHHHHHHHHHHh----------------------cCCChHHHHHHHHHHHHccCcCchHHHHHHHHhc
Q psy17412 52 NGNKAFQSGQYEAALVQYDKAIEQ----------------------VRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRL 109 (240)
Q Consensus 52 ~a~~~~~~~~~~~A~~~~~~a~~~----------------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 109 (240)
.|.++...|.+++|..+|+++-.. ..+.+.+|+.+|.++...|++++|+..|.++
T Consensus 1055 IA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA--- 1131 (1630)
T 1xi4_A 1055 IANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA--- 1131 (1630)
T ss_pred HHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc---
Confidence 477777778888777777765211 1346889999999999999999999999886
Q ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCch---HH-----------HHHhc--cCchHHHHHHHHHHHHhc
Q psy17412 110 DEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRR---KL-----------AIEQV--RDSPVLYTNRALTLLHLQ 173 (240)
Q Consensus 110 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~---~~-----------~~~~~--~~~~~~~~~la~~~~~~~ 173 (240)
+++..+..+|.++.+.|++++|+++|..+.+..++.. .. .+..+ ......+..+|..+...|
T Consensus 1132 --dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~~~n~ad~~~iGd~le~eg 1209 (1630)
T 1xi4_A 1132 --DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEK 1209 (1630)
T ss_pred --CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHhCCCHHHHHHHHHHHHhcC
Confidence 7788999999999999999999999999998775520 00 01111 123345678999999999
Q ss_pred ccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy17412 174 LYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIREL 219 (240)
Q Consensus 174 ~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~ 219 (240)
+|++|..+|.++ ..|..++.++.++|++++|++.++++
T Consensus 1210 ~YeeA~~~Y~kA--------~ny~rLA~tLvkLge~q~AIEaarKA 1247 (1630)
T 1xi4_A 1210 MYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKA 1247 (1630)
T ss_pred CHHHHHHHHHhh--------hHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 999999999986 47999999999999999999999988
No 192
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.50 E-value=2.5e-13 Score=106.55 Aligned_cols=173 Identities=11% Similarity=-0.017 Sum_probs=142.1
Q ss_pred HHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCCh------HHHHHHHHHHHHccCcCchHHHHHHHHhcC------cc
Q psy17412 45 IADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSP------VLYTNRALTLLHLQLYDPVLPDCDKALRLD------ED 112 (240)
Q Consensus 45 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~------~~~~~la~~~~~~~~~~~A~~~~~~~~~~~------~~ 112 (240)
...++..+|..|...|++++|++++.+++...+... .+...++.++...|++++|+..+++++... +.
T Consensus 54 ~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 133 (434)
T 4b4t_Q 54 QETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFL 133 (434)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSS
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHH
Confidence 345788999999999999999999999998766542 356678888888999999999999998654 33
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChh-
Q psy17412 113 NMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDED- 191 (240)
Q Consensus 113 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~- 191 (240)
...++..+|.++...|++++|...+++++....... ..+....++..+|.++...|++++|...+++++...+.
T Consensus 134 ~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~ 208 (434)
T 4b4t_Q 134 KHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLD-----DKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSI 208 (434)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSS-----CSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcc-----cchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcC
Confidence 467899999999999999999999999987533211 11223567999999999999999999999999876432
Q ss_pred ------hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q psy17412 192 ------NMKAHLYKARAMHNLGQREEAKEYIRELVEK 222 (240)
Q Consensus 192 ------~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 222 (240)
....+..+|.++...|++++|..+|.+++..
T Consensus 209 ~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~ 245 (434)
T 4b4t_Q 209 YCPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFES 245 (434)
T ss_dssp CCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 2456788899999999999999999999865
No 193
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.50 E-value=2.7e-13 Score=86.59 Aligned_cols=84 Identities=19% Similarity=0.223 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Q psy17412 64 AALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEK 143 (240)
Q Consensus 64 ~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 143 (240)
+|+..|+++++.+|+++.+++.+|.++...|++++|+..|++++..+|.++.+++.+|.++..+|++++|+..|++++++
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 82 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAA 82 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCc
Q psy17412 144 YPTR 147 (240)
Q Consensus 144 ~~~~ 147 (240)
.|..
T Consensus 83 ~~~~ 86 (115)
T 2kat_A 83 AQSR 86 (115)
T ss_dssp HHHH
T ss_pred cccc
Confidence 8754
No 194
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.48 E-value=2e-14 Score=110.84 Aligned_cols=145 Identities=14% Similarity=0.135 Sum_probs=35.5
Q ss_pred hHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHH
Q psy17412 44 DIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARA 123 (240)
Q Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 123 (240)
+.+..|..+|..+...|++++|++.|.++ .++..+..++.++...|++++|+.+++.+.+..++ +.+...++.+
T Consensus 30 ~~~~vWs~La~A~l~~g~~~eAIdsfika-----~D~~~y~~V~~~ae~~g~~EeAi~yl~~ark~~~~-~~i~~~Li~~ 103 (449)
T 1b89_A 30 NEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE-SYVETELIFA 103 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHcC-----CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCcc-chhHHHHHHH
Confidence 44579999999999999999999999774 45568889999999999999999999998875433 5666777778
Q ss_pred HHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHH
Q psy17412 124 MHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAM 203 (240)
Q Consensus 124 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~ 203 (240)
|.++|++.++.+.++. |+. .. +..+|..+...|+|++|..+|.++ ..|..+|.++
T Consensus 104 Y~Klg~l~e~e~f~~~-----pn~-~a-----------~~~IGd~~~~~g~yeeA~~~Y~~a--------~n~~~LA~~L 158 (449)
T 1b89_A 104 LAKTNRLAELEEFING-----PNN-AH-----------IQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTL 158 (449)
T ss_dssp -----CHHHHTTTTTC-----C----------------------------CTTTHHHHHHHT--------TCHHHHHHHH
T ss_pred HHHhCCHHHHHHHHcC-----CcH-HH-----------HHHHHHHHHHcCCHHHHHHHHHHh--------hhHHHHHHHH
Confidence 8888888777766642 321 23 777777777777777777777755 3567777777
Q ss_pred HHcCCHHHHHHHHHHH
Q psy17412 204 HNLGQREEAKEYIREL 219 (240)
Q Consensus 204 ~~~g~~~~A~~~~~~~ 219 (240)
.++|++++|++.++++
T Consensus 159 ~~Lg~yq~AVea~~KA 174 (449)
T 1b89_A 159 VHLGEYQAAVDGARKA 174 (449)
T ss_dssp HTTTCHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHc
Confidence 7777777777777776
No 195
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.47 E-value=5e-13 Score=81.41 Aligned_cols=81 Identities=25% Similarity=0.269 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhH
Q psy17412 114 MKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNM 193 (240)
Q Consensus 114 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~ 193 (240)
+.+++.+|.++...|++++|+..++++++..|++... +..+|.++...|++++|+..++++++.+|++.
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~-----------~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~ 77 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEA-----------WYNLGNAYYKQGDYDEAIEYYQKALELDPNNA 77 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----------HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHH-----------HHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCH
Confidence 3344444444444444444444444444444444333 44444444444444444444444444444444
Q ss_pred HHHHHHHHHHHH
Q psy17412 194 KAHLYKARAMHN 205 (240)
Q Consensus 194 ~~~~~la~~~~~ 205 (240)
.++..+|.++..
T Consensus 78 ~~~~~l~~~~~~ 89 (91)
T 1na3_A 78 EAKQNLGNAKQK 89 (91)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 444444444433
No 196
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.46 E-value=1.3e-12 Score=103.52 Aligned_cols=134 Identities=14% Similarity=0.039 Sum_probs=113.5
Q ss_pred HHHHHhHhHHHHhCCHHHHHHHHHHHHHhc-----CC---ChHHHHHHHHHHHHccCcCchHHHHHHHHhcC--------
Q psy17412 47 DHFKANGNKAFQSGQYEAALVQYDKAIEQV-----RD---SPVLYTNRALTLLHLQLYDPVLPDCDKALRLD-------- 110 (240)
Q Consensus 47 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~-----~~---~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-------- 110 (240)
......+..+..+|+|++|+.+++++++.. |+ ....+.++|.+|..+|+|++|+.++++++...
T Consensus 310 ~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~H 389 (490)
T 3n71_A 310 KDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNN 389 (490)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCC
Confidence 344455666788999999999999999862 33 35688999999999999999999999998652
Q ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-----CCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHH
Q psy17412 111 EDNMKAHLYKARAMHSLGQREEAKEYVRQLVEK-----YPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKA 185 (240)
Q Consensus 111 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 185 (240)
|+....+.++|.+|..+|++++|+.++++++++ .|+++.. ..+..+++.++..++.+++|...|.++
T Consensus 390 p~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~--------~~~~~~l~~~~~e~~~~~~ae~~~~~~ 461 (490)
T 3n71_A 390 AQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPIT--------KDLEAMRMQTEMELRMFRQNEFMYHKM 461 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555668999999999999999999999999974 6777766 666889999999999999999999888
Q ss_pred hhc
Q psy17412 186 LRL 188 (240)
Q Consensus 186 l~~ 188 (240)
.+.
T Consensus 462 ~~~ 464 (490)
T 3n71_A 462 REA 464 (490)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 197
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.42 E-value=2.3e-13 Score=84.49 Aligned_cols=91 Identities=11% Similarity=0.070 Sum_probs=81.2
Q ss_pred HHhHhHHHHhCCHHHHHHHHHHHHHhcCCChH-HHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcC
Q psy17412 50 KANGNKAFQSGQYEAALVQYDKAIEQVRDSPV-LYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLG 128 (240)
Q Consensus 50 ~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~-~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 128 (240)
+..|..+...|++++|+..|+++++.+|+++. ++..+|.++...|++++|+..|+++++++|++..++.. +
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~ 75 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------K 75 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------H
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------H
Confidence 56889999999999999999999999999999 99999999999999999999999999999999887744 6
Q ss_pred CHHHHHHHHHHHHHcCCCch
Q psy17412 129 QREEAKEYVRQLVEKYPTRR 148 (240)
Q Consensus 129 ~~~~A~~~~~~a~~~~~~~~ 148 (240)
.+.+++..|+++....|++.
T Consensus 76 ~~~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 76 MVMDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp HHHHHHHHHCCTTHHHHCCS
T ss_pred HHHHHHHHHHHHhccCcccc
Confidence 67788888888877777643
No 198
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=99.40 E-value=2.6e-11 Score=99.67 Aligned_cols=183 Identities=11% Similarity=-0.005 Sum_probs=156.4
Q ss_pred HHhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhc-----------CC-----------ChHHHHHHHHHHHHccCc
Q psy17412 39 RKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQV-----------RD-----------SPVLYTNRALTLLHLQLY 96 (240)
Q Consensus 39 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~-----------~~-----------~~~~~~~la~~~~~~~~~ 96 (240)
....|.....|+..+......|++++|...|++++... |. ...+|...+....+.|+.
T Consensus 371 i~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l 450 (679)
T 4e6h_A 371 QQCIPNSAVLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGL 450 (679)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred HHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCH
Confidence 34556777788889999999999999999999999852 42 345788888888899999
Q ss_pred CchHHHHHHHHhc-CcccHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcc
Q psy17412 97 DPVLPDCDKALRL-DEDNMKAHLYKARAMHSLGQ-REEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQL 174 (240)
Q Consensus 97 ~~A~~~~~~~~~~-~~~~~~~~~~la~~~~~~~~-~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~ 174 (240)
+.|...|.++++. .+....+|...|.+....++ ++.|...|+++++..|+++.. +...+......|+
T Consensus 451 ~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~-----------w~~y~~fe~~~~~ 519 (679)
T 4e6h_A 451 AASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEY-----------INKYLDFLIYVNE 519 (679)
T ss_dssp HHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHH-----------HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHH-----------HHHHHHHHHhCCC
Confidence 9999999999987 44456778888888777755 899999999999999998777 8888888888999
Q ss_pred cCchhhHHHHHhhcCh---hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHH
Q psy17412 175 YDPVLPDCDKALRLDE---DNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVEN 232 (240)
Q Consensus 175 ~~~A~~~~~~~l~~~~---~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~ 232 (240)
.+.|...|++++...| ....+|..........|+.+.+....+++.+..|+++.+...
T Consensus 520 ~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~~G~~~~~~~v~~R~~~~~P~~~~~~~f 580 (679)
T 4e6h_A 520 ESQVKSLFESSIDKISDSHLLKMIFQKVIFFESKVGSLNSVRTLEKRFFEKFPEVNKLEEF 580 (679)
T ss_dssp HHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHSTTCCHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcHHHHH
Confidence 9999999999999888 467888889999999999999999999999999998665433
No 199
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.40 E-value=1e-12 Score=81.80 Aligned_cols=71 Identities=14% Similarity=0.068 Sum_probs=43.2
Q ss_pred cCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q psy17412 76 VRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPT 146 (240)
Q Consensus 76 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~ 146 (240)
+|+++.+++.+|.++...|++++|+..|+++++++|+++.+++.+|.++..+|++++|+..+++++++.|.
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~ 73 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVARE 73 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhc
Confidence 45556666666666666666666666666666666666666666666666666666666666666655443
No 200
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.40 E-value=3.8e-12 Score=100.87 Aligned_cols=131 Identities=15% Similarity=0.109 Sum_probs=111.7
Q ss_pred HHHHHHHHccCcCchHHHHHHHHhc--------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-----CCCchHHH
Q psy17412 85 NRALTLLHLQLYDPVLPDCDKALRL--------DEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEK-----YPTRRKLA 151 (240)
Q Consensus 85 ~la~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~-----~~~~~~~~ 151 (240)
..+..+...|+|++|+..+++++.. .|.....+.++|.+|..+|+|++|+.++++++.+ .|+++..
T Consensus 314 e~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~- 392 (490)
T 3n71_A 314 EKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQL- 392 (490)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHH-
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHH-
Confidence 3445567889999999999999865 2455678999999999999999999999999975 5777666
Q ss_pred HHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhc--------ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q psy17412 152 IEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRL--------DEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKY 223 (240)
Q Consensus 152 ~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~--------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~ 223 (240)
...+.++|.+|..+|++++|+..+++++++ +|........++.++..+|.+++|...|.++.+..
T Consensus 393 -------a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 393 -------GMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp -------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777999999999999999999999999865 34456667889999999999999999999987654
No 201
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.38 E-value=2.8e-12 Score=79.74 Aligned_cols=72 Identities=14% Similarity=0.136 Sum_probs=56.4
Q ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcC
Q psy17412 110 DEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLD 189 (240)
Q Consensus 110 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~ 189 (240)
+|+++.+++.+|.++..+|++++|+..|+++++++|+++.. +..+|.++...|++++|+..+++++++.
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a-----------~~~lg~~~~~~g~~~~A~~~~~~al~l~ 71 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGT-----------YYHLGKLYERLDRTDDAIDTYAQGIEVA 71 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHH-----------HHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHH-----------HHHHHHHHHHcCCHHHHHHHHHHHHhhh
Confidence 57777888888888888888888888888888888877766 8888888888888888888888888776
Q ss_pred hhh
Q psy17412 190 EDN 192 (240)
Q Consensus 190 ~~~ 192 (240)
|..
T Consensus 72 ~~~ 74 (100)
T 3ma5_A 72 REE 74 (100)
T ss_dssp HHH
T ss_pred hcC
Confidence 643
No 202
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.37 E-value=5.2e-13 Score=82.82 Aligned_cols=91 Identities=12% Similarity=0.149 Sum_probs=75.3
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCCchH-HHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHH
Q psy17412 118 LYKARAMHSLGQREEAKEYVRQLVEKYPTRRK-LAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAH 196 (240)
Q Consensus 118 ~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~ 196 (240)
+.+|.++...|++++|+..++++++.+|++.. . +..+|.++...|++++|+..|+++++.+|++..++
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~-----------~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEA-----------YYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHH-----------HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHH-----------HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 56788888889999999999999998888776 6 88899999999999999999999999999887776
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH
Q psy17412 197 LYKARAMHNLGQREEAKEYIRELVEKYPTRR 227 (240)
Q Consensus 197 ~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~ 227 (240)
.. +.+.+++..|+++...+|+++
T Consensus 73 ~~--------~~~~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 73 AR--------KMVMDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp HH--------HHHHHHHHHHCCTTHHHHCCS
T ss_pred HH--------HHHHHHHHHHHHHhccCcccc
Confidence 44 567778888888777776654
No 203
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=99.36 E-value=5.4e-11 Score=89.65 Aligned_cols=47 Identities=9% Similarity=-0.001 Sum_probs=37.4
Q ss_pred HHHHHHHhHhHHHHhCC---HHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q psy17412 45 IADHFKANGNKAFQSGQ---YEAALVQYDKAIEQVRDSPVLYTNRALTLL 91 (240)
Q Consensus 45 ~~~~~~~~a~~~~~~~~---~~~A~~~~~~a~~~~~~~~~~~~~la~~~~ 91 (240)
.+-.++..|..++..++ ..+|+.+|+++++.+|+.+.++..++.+|.
T Consensus 195 ~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~ 244 (372)
T 3ly7_A 195 ALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDI 244 (372)
T ss_dssp GGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 45555667777776554 578999999999999999999988888886
No 204
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.35 E-value=1.3e-11 Score=81.43 Aligned_cols=110 Identities=14% Similarity=0.030 Sum_probs=63.2
Q ss_pred CCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHH----cCCHHHHHH
Q psy17412 60 GQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHS----LGQREEAKE 135 (240)
Q Consensus 60 ~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~ 135 (240)
+++++|+.+|+++.+.... .+. +|.+|...+..++|+.+|+++.+. .++.+++.+|.+|.. .+++++|+.
T Consensus 9 ~d~~~A~~~~~~aa~~g~~--~a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~ 82 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEM--FGC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQ 82 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCT--THH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCH--hhh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHH
Confidence 3566666666666665422 222 666666655666666666666654 445566666666665 566666666
Q ss_pred HHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHH----hcccCchhhHHHHHhhc
Q psy17412 136 YVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLH----LQLYDPVLPDCDKALRL 188 (240)
Q Consensus 136 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~l~~ 188 (240)
+|+++.+. .++.. .+++|.+|.. .+++++|+.+|+++.+.
T Consensus 83 ~~~~Aa~~--g~~~a-----------~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 83 YYSKACGL--NDQDG-----------CLILGYKQYAGKGVVKNEKQAVKTFEKACRL 126 (138)
T ss_dssp HHHHHHHT--TCHHH-----------HHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHcC--CCHHH-----------HHHHHHHHHCCCCCCcCHHHHHHHHHHHHHC
Confidence 66666554 22333 5556666555 55555555555555554
No 205
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.34 E-value=1.7e-11 Score=80.84 Aligned_cols=120 Identities=10% Similarity=-0.040 Sum_probs=102.8
Q ss_pred cCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHH--
Q psy17412 94 QLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLH-- 171 (240)
Q Consensus 94 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-- 171 (240)
+++++|+.+|+++.+..... +. +|.++...+..++|+.+|+++.+. .++.. .+++|.+|..
T Consensus 9 ~d~~~A~~~~~~aa~~g~~~--a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a-----------~~~Lg~~y~~G~ 71 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEMF--GC--LSLVSNSQINKQKLFQYLSKACEL--NSGNG-----------CRFLGDFYENGK 71 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCTT--HH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHH-----------HHHHHHHHHHCS
T ss_pred cCHHHHHHHHHHHHcCCCHh--hh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHH-----------HHHHHHHHHcCC
Confidence 57889999999999886444 33 999999999999999999999987 44555 9999999998
Q ss_pred --hcccCchhhHHHHHhhcChhhHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q psy17412 172 --LQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHN----LGQREEAKEYIRELVEKYPTRRKLVENYT 234 (240)
Q Consensus 172 --~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~~~~~~p~~~~~~~~l~ 234 (240)
.+++++|+.+|+++.+. .++.+.+++|.+|.. .+++++|+.+|+++.+.. ++.+...++
T Consensus 72 g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g--~~~A~~~l~ 136 (138)
T 1klx_A 72 YVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG--SEDACGILN 136 (138)
T ss_dssp SSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHC-
T ss_pred CCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCC--CHHHHHHHh
Confidence 89999999999999986 578999999999999 999999999999999874 555555544
No 206
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=99.26 E-value=2.5e-10 Score=86.03 Aligned_cols=152 Identities=11% Similarity=0.060 Sum_probs=109.4
Q ss_pred HHHHhcCCChHHH--HHHHHHHHHcc---CcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCH----HHHHHHHHHHH
Q psy17412 71 KAIEQVRDSPVLY--TNRALTLLHLQ---LYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQR----EEAKEYVRQLV 141 (240)
Q Consensus 71 ~a~~~~~~~~~~~--~~la~~~~~~~---~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~----~~A~~~~~~a~ 141 (240)
++...-|.+..+| +..|..++..+ +..+|+.+|+++++++|+++.++..++.++.....+ ......+.+++
T Consensus 185 r~~~~~p~~~~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~ 264 (372)
T 3ly7_A 185 TLQKILPHRGALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEI 264 (372)
T ss_dssp HHHHHSCSSGGGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred HHhccCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHH
Confidence 3445556665543 34566665543 458899999999999999999999888887532111 11112222222
Q ss_pred HcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17412 142 EKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVE 221 (240)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~ 221 (240)
... ..+...+.++.++..++..+...|++++|+..+++++.++|+ ...+..+|.++...|++++|++.|.+++.
T Consensus 265 ~a~-----~a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~Alr 338 (372)
T 3ly7_A 265 DNI-----VTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFN 338 (372)
T ss_dssp HHH-----HTCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHH-----HhcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 110 001122334455999999998899999999999999999975 67889999999999999999999999999
Q ss_pred hCCCcHH
Q psy17412 222 KYPTRRK 228 (240)
Q Consensus 222 ~~p~~~~ 228 (240)
++|..+.
T Consensus 339 L~P~~~t 345 (372)
T 3ly7_A 339 LRPGANT 345 (372)
T ss_dssp HSCSHHH
T ss_pred cCCCcCh
Confidence 9998864
No 207
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=99.19 E-value=5.1e-10 Score=73.55 Aligned_cols=94 Identities=14% Similarity=0.068 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhc---ccCchhhHHHHHhhcC-h-hhHHHHHHHHHHHH
Q psy17412 130 REEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQ---LYDPVLPDCDKALRLD-E-DNMKAHLYKARAMH 204 (240)
Q Consensus 130 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~---~~~~A~~~~~~~l~~~-~-~~~~~~~~la~~~~ 204 (240)
...+.+.|.+.+..++.+.+. .+++|.++.+.+ +.++++..++.+++.+ | +..++++++|..++
T Consensus 14 l~~~~~~y~~e~~~~~~~~~~-----------~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~ 82 (152)
T 1pc2_A 14 LLKFEKKFQSEKAAGSVSKST-----------QFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNY 82 (152)
T ss_dssp HHHHHHHHHHHHHTTCCCHHH-----------HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCCcHHH-----------HHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHH
Confidence 456777788888877777666 999999999987 7779999999999998 8 67999999999999
Q ss_pred HcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q psy17412 205 NLGQREEAKEYIRELVEKYPTRRKLVENYT 234 (240)
Q Consensus 205 ~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~ 234 (240)
++|+|++|..+++++++..|++.++.....
T Consensus 83 kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~ 112 (152)
T 1pc2_A 83 RLKEYEKALKYVRGLLQTEPQNNQAKELER 112 (152)
T ss_dssp HTSCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 999999999999999999999988766543
No 208
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=99.15 E-value=1.8e-09 Score=78.39 Aligned_cols=108 Identities=11% Similarity=0.089 Sum_probs=92.5
Q ss_pred hcCcccHHHHHHHHHHHHH---c--C------CHHHHHHHHHHHHHcCCC--chHHHHHhccCchHHHHHHHHHHHHh--
Q psy17412 108 RLDEDNMKAHLYKARAMHS---L--G------QREEAKEYVRQLVEKYPT--RRKLAIEQVRDSPVLYTNRALTLLHL-- 172 (240)
Q Consensus 108 ~~~~~~~~~~~~la~~~~~---~--~------~~~~A~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~~~la~~~~~~-- 172 (240)
+.+|+++++++..|.+... . | ....|...++++++++|+ +... +..+|.+|...
T Consensus 146 ~~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA-----------~~~LG~lY~~vPp 214 (301)
T 3u64_A 146 RCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAV-----------WNVLTKFYAAAPE 214 (301)
T ss_dssp TCCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHH-----------HHHHHHHHHHSCT
T ss_pred HcCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHH-----------HHHHHHHHHhCCC
Confidence 5568888888888776543 2 2 357899999999999999 4445 99999999995
Q ss_pred ---cccCchhhHHHHHhhcChhh-HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCc
Q psy17412 173 ---QLYDPVLPDCDKALRLDEDN-MKAHLYKARAMHN-LGQREEAKEYIRELVEKYPTR 226 (240)
Q Consensus 173 ---~~~~~A~~~~~~~l~~~~~~-~~~~~~la~~~~~-~g~~~~A~~~~~~~~~~~p~~ 226 (240)
|+.++|.++|+++++++|+. ..+++.+|..+.. .|++++|..++++++..+|..
T Consensus 215 ~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 215 SFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp TTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred ccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 99999999999999999975 9999999999988 599999999999999988763
No 209
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.14 E-value=3e-10 Score=69.17 Aligned_cols=72 Identities=21% Similarity=0.053 Sum_probs=64.9
Q ss_pred cCchHHHHHHHHHHHHhcc---cCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH
Q psy17412 156 RDSPVLYTNRALTLLHLQL---YDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRR 227 (240)
Q Consensus 156 ~~~~~~~~~la~~~~~~~~---~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~ 227 (240)
|.++.++..+|.+++..++ .++|...++++++.+|+++.+++.+|..++..|++++|+.+|++++..+|.++
T Consensus 3 p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~ 77 (93)
T 3bee_A 3 AVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNL 77 (93)
T ss_dssp CCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 3445569999999976655 78999999999999999999999999999999999999999999999999843
No 210
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.11 E-value=5.3e-10 Score=68.09 Aligned_cols=72 Identities=21% Similarity=0.059 Sum_probs=59.7
Q ss_pred cCCChHHHHHHHHHHHHccC---cCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc
Q psy17412 76 VRDSPVLYTNRALTLLHLQL---YDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTR 147 (240)
Q Consensus 76 ~~~~~~~~~~la~~~~~~~~---~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~ 147 (240)
+|+++.++..+|.+++..++ .++|...++++++.+|+++.+++.+|..++..|+|++|+.+|+++++.+|.+
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 57778888888888876655 6788888888888888888888888888888888888888888888888873
No 211
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.11 E-value=1.2e-09 Score=85.53 Aligned_cols=117 Identities=9% Similarity=-0.069 Sum_probs=94.2
Q ss_pred HHHHhHhHHHHhCCHHHHHHHHHHHHHh-----cCCC---hHHHHHHHHHHHHccCcCchHHHHHHHHhcC--------c
Q psy17412 48 HFKANGNKAFQSGQYEAALVQYDKAIEQ-----VRDS---PVLYTNRALTLLHLQLYDPVLPDCDKALRLD--------E 111 (240)
Q Consensus 48 ~~~~~a~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~--------~ 111 (240)
........+..+|+|++|+..++++++. .|++ ...+.++|.+|..+|+|++|+.++++++... |
T Consensus 289 ~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp 368 (429)
T 3qwp_A 289 ESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHP 368 (429)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCH
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCCh
Confidence 3344455567889999999999999976 2333 5688999999999999999999999998652 5
Q ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-----CCCchHHHHHhccCchHHHHHHHHHHHHh
Q psy17412 112 DNMKAHLYKARAMHSLGQREEAKEYVRQLVEK-----YPTRRKLAIEQVRDSPVLYTNRALTLLHL 172 (240)
Q Consensus 112 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~la~~~~~~ 172 (240)
.....+.++|.+|..+|++++|+.++++++++ .|+++.. ..++.+++.+....
T Consensus 369 ~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~--------~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 369 VRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLI--------EDLILLLEECDANI 426 (429)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHH--------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHH--------HHHHHHHHHHHHHH
Confidence 55668999999999999999999999999874 6777666 45567777766544
No 212
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=99.10 E-value=2.1e-09 Score=70.60 Aligned_cols=90 Identities=16% Similarity=0.085 Sum_probs=74.5
Q ss_pred CHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHcc---CcCchHHHHHHHHhcC-c-ccHHHHHHHHHHHHHcCCHHHHHH
Q psy17412 61 QYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQ---LYDPVLPDCDKALRLD-E-DNMKAHLYKARAMHSLGQREEAKE 135 (240)
Q Consensus 61 ~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~---~~~~A~~~~~~~~~~~-~-~~~~~~~~la~~~~~~~~~~~A~~ 135 (240)
....+.+.|.+.++.++.+..+.+++|+++.+.+ +.++++..++.+++.+ | ...+++|.+|..++++|+|++|..
T Consensus 13 ~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~ 92 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALK 92 (152)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred HHHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHH
Confidence 3456677777777777888888888898888877 6668888888888887 7 567888999999999999999999
Q ss_pred HHHHHHHcCCCchHH
Q psy17412 136 YVRQLVEKYPTRRKL 150 (240)
Q Consensus 136 ~~~~a~~~~~~~~~~ 150 (240)
++++++++.|++...
T Consensus 93 y~~~lL~ieP~n~QA 107 (152)
T 1pc2_A 93 YVRGLLQTEPQNNQA 107 (152)
T ss_dssp HHHHHHHHCTTCHHH
T ss_pred HHHHHHhcCCCCHHH
Confidence 999999999987766
No 213
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.10 E-value=3.4e-09 Score=82.84 Aligned_cols=102 Identities=12% Similarity=0.036 Sum_probs=87.3
Q ss_pred HHcCCHHHHHHHHHHHHHc-----CCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhc--------Chh
Q psy17412 125 HSLGQREEAKEYVRQLVEK-----YPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRL--------DED 191 (240)
Q Consensus 125 ~~~~~~~~A~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~--------~~~ 191 (240)
...|+|++|+..+++++++ .|+++.. ...+.++|.+|..+|+|++|+.+++++++. +|+
T Consensus 309 ~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~--------a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~ 380 (433)
T 3qww_A 309 KHYKSPSELLEICELSQEKMSSVFEDSNVYM--------LHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLN 380 (433)
T ss_dssp TTTSCHHHHHHHHHHHHHHHTTTBCTTSHHH--------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHH
T ss_pred hhccCHHHHHHHHHHHHHHhhCccChhchHH--------HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChH
Confidence 3568899999999999984 6777666 677999999999999999999999999865 456
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCcHHHHHHHH
Q psy17412 192 NMKAHLYKARAMHNLGQREEAKEYIRELVEK-----YPTRRKLVENYT 234 (240)
Q Consensus 192 ~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~-----~p~~~~~~~~l~ 234 (240)
....+.++|.+|..+|++++|...|++++.+ .|++|.+.....
T Consensus 381 ~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~ 428 (433)
T 3qww_A 381 VASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQ 428 (433)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHH
Confidence 6778999999999999999999999999975 588887665443
No 214
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.07 E-value=1.3e-09 Score=85.07 Aligned_cols=96 Identities=10% Similarity=0.040 Sum_probs=81.0
Q ss_pred HHHHhCCHHHHHHHHHHHHHh-----cCCC---hHHHHHHHHHHHHccCcCchHHHHHHHHhc--------CcccHHHHH
Q psy17412 55 KAFQSGQYEAALVQYDKAIEQ-----VRDS---PVLYTNRALTLLHLQLYDPVLPDCDKALRL--------DEDNMKAHL 118 (240)
Q Consensus 55 ~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~ 118 (240)
.....|+|++|+..++++++. .|++ ...+.++|.+|..+|+|++|+.++++++.. .|+....+.
T Consensus 307 ~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~ 386 (433)
T 3qww_A 307 RAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWL 386 (433)
T ss_dssp HHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHH
T ss_pred HhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHH
Confidence 334568999999999999986 3444 567889999999999999999999999965 355566899
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHc-----CCCchHH
Q psy17412 119 YKARAMHSLGQREEAKEYVRQLVEK-----YPTRRKL 150 (240)
Q Consensus 119 ~la~~~~~~~~~~~A~~~~~~a~~~-----~~~~~~~ 150 (240)
++|.+|..+|++++|+.++++++++ .|+++..
T Consensus 387 nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~ 423 (433)
T 3qww_A 387 KLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYI 423 (433)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHH
T ss_pred HHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 9999999999999999999999875 5666654
No 215
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=99.02 E-value=1.2e-08 Score=74.12 Aligned_cols=107 Identities=12% Similarity=-0.051 Sum_probs=90.2
Q ss_pred hcCCChHHHHHHHHHHHH-----ccC------cCchHHHHHHHHhcCcc--cHHHHHHHHHHHHHc-----CCHHHHHHH
Q psy17412 75 QVRDSPVLYTNRALTLLH-----LQL------YDPVLPDCDKALRLDED--NMKAHLYKARAMHSL-----GQREEAKEY 136 (240)
Q Consensus 75 ~~~~~~~~~~~la~~~~~-----~~~------~~~A~~~~~~~~~~~~~--~~~~~~~la~~~~~~-----~~~~~A~~~ 136 (240)
.+|+++..++..|.+... .|. ...|...++++++++|+ +..+|..+|.+|... |+.++|..+
T Consensus 147 ~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ 226 (301)
T 3u64_A 147 CTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTA 226 (301)
T ss_dssp CCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHH
T ss_pred cCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHH
Confidence 467777777777766643 132 35788889999999999 566999999999995 999999999
Q ss_pred HHHHHHcCCCc-hHHHHHhccCchHHHHHHHHHHHHh-cccCchhhHHHHHhhcChhh
Q psy17412 137 VRQLVEKYPTR-RKLAIEQVRDSPVLYTNRALTLLHL-QLYDPVLPDCDKALRLDEDN 192 (240)
Q Consensus 137 ~~~a~~~~~~~-~~~~~~~~~~~~~~~~~la~~~~~~-~~~~~A~~~~~~~l~~~~~~ 192 (240)
|+++++++|+. ... ++..|..+... |+++.|...+++++..+|..
T Consensus 227 ferAL~LnP~~~id~-----------~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 227 FEHLTRYCSAHDPDH-----------HITYADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHCCTTCSHH-----------HHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred HHHHHHhCCCCCchH-----------HHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 99999999974 777 99999999884 99999999999999998874
No 216
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=99.01 E-value=2.7e-09 Score=66.53 Aligned_cols=77 Identities=18% Similarity=0.180 Sum_probs=66.0
Q ss_pred HHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhc-------CCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHH
Q psy17412 45 IADHFKANGNKAFQSGQYEAALVQYDKAIEQV-------RDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAH 117 (240)
Q Consensus 45 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~-------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 117 (240)
.+...+.+|..++..|+|..|+..|+++++.. +..+.++..+|.++.++|+++.|+..+++++.+.|++..+.
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 35667889999999999999999999999874 23467888999999999999999999999999999998887
Q ss_pred HHHH
Q psy17412 118 LYKA 121 (240)
Q Consensus 118 ~~la 121 (240)
.+++
T Consensus 84 ~n~~ 87 (104)
T 2v5f_A 84 GNLK 87 (104)
T ss_dssp HHHH
T ss_pred hhHH
Confidence 7776
No 217
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=99.01 E-value=4.1e-09 Score=65.73 Aligned_cols=76 Identities=17% Similarity=0.063 Sum_probs=68.2
Q ss_pred hHHHHHHHHHHHHhcccCchhhHHHHHhhcC-------hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHH
Q psy17412 159 PVLYTNRALTLLHLQLYDPVLPDCDKALRLD-------EDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVE 231 (240)
Q Consensus 159 ~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~-------~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~ 231 (240)
+...+.+|..++..|+|..|+.+|+.+++.. +....++..+|.++.++|++++|+.+++++++..|+++.+..
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~ 84 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHh
Confidence 4458899999999999999999999999863 346889999999999999999999999999999999998877
Q ss_pred HHH
Q psy17412 232 NYT 234 (240)
Q Consensus 232 ~l~ 234 (240)
++.
T Consensus 85 n~~ 87 (104)
T 2v5f_A 85 NLK 87 (104)
T ss_dssp HHH
T ss_pred hHH
Confidence 665
No 218
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.00 E-value=1.6e-08 Score=79.03 Aligned_cols=104 Identities=7% Similarity=-0.025 Sum_probs=87.8
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHc-----CCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhc-------
Q psy17412 121 ARAMHSLGQREEAKEYVRQLVEK-----YPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRL------- 188 (240)
Q Consensus 121 a~~~~~~~~~~~A~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~------- 188 (240)
..-+..+|++++|+..+++++++ .|+++.. ...+.++|.+|..+|+|++|+.++++++..
T Consensus 294 ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~--------~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~ 365 (429)
T 3qwp_A 294 IEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQ--------LKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPG 365 (429)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHH--------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHhhccHHHHHHHHHHHHHhccCcCCccchHH--------HHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCC
Confidence 34466789999999999999975 4566655 677999999999999999999999999865
Q ss_pred -ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCcHHHHHH
Q psy17412 189 -DEDNMKAHLYKARAMHNLGQREEAKEYIRELVEK-----YPTRRKLVEN 232 (240)
Q Consensus 189 -~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~-----~p~~~~~~~~ 232 (240)
+|.....+.++|.+|..+|++++|..++++++.+ .|++|.+...
T Consensus 366 ~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~ 415 (429)
T 3qwp_A 366 SHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDL 415 (429)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHH
T ss_pred CChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHH
Confidence 4556778999999999999999999999999964 5788766544
No 219
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=98.91 E-value=4.1e-07 Score=72.57 Aligned_cols=173 Identities=12% Similarity=0.043 Sum_probs=117.7
Q ss_pred hchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHh----------cC
Q psy17412 41 ARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALR----------LD 110 (240)
Q Consensus 41 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~----------~~ 110 (240)
..|..+..|+..+......|+.++|...|++++.. |.+...|...+.. .+.++....+..... ..
T Consensus 208 ~~p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~----~e~~~~~~~l~~~~~~~~~~~~~~~~~ 282 (493)
T 2uy1_A 208 SFYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLV----MDEEAVYGDLKRKYSMGEAESAEKVFS 282 (493)
T ss_dssp HTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHH----TTCTHHHHHHHHHTC----------CH
T ss_pred cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhh----cchhHHHHHHHHHHHhhccchhhhhcc
Confidence 34666788888888888889999999999999998 8887666644433 111111111111110 01
Q ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhc-ccCchhhHHHHHhhcC
Q psy17412 111 EDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQ-LYDPVLPDCDKALRLD 189 (240)
Q Consensus 111 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-~~~~A~~~~~~~l~~~ 189 (240)
+....+|...+....+.+..+.|...|+++ + .|.. ...++...|.+....+ +.+.|...|+.+++..
T Consensus 283 ~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~-~~~~----------~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~ 350 (493)
T 2uy1_A 283 KELDLLRINHLNYVLKKRGLELFRKLFIEL-G-NEGV----------GPHVFIYCAFIEYYATGSRATPYNIFSSGLLKH 350 (493)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-T-TSCC----------CHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHC
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHh-h-CCCC----------ChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHC
Confidence 223356777777777788899999999998 3 3321 1223666676666666 5889999999999988
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q psy17412 190 EDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYT 234 (240)
Q Consensus 190 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~ 234 (240)
|+.+..+...+......|+.+.|...|+++ +.+..+|..+.
T Consensus 351 ~~~~~~~~~yid~e~~~~~~~~aR~l~er~----~k~~~lw~~~~ 391 (493)
T 2uy1_A 351 PDSTLLKEEFFLFLLRIGDEENARALFKRL----EKTSRMWDSMI 391 (493)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHS----CCBHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHH----HHHHHHHHHHH
Confidence 888888888888888899999998888876 23445554443
No 220
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=98.83 E-value=6.4e-07 Score=71.50 Aligned_cols=190 Identities=9% Similarity=-0.028 Sum_probs=131.7
Q ss_pred hHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccC-cCchHHHHHHHHhc---CcccHHHHHH
Q psy17412 44 DIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQL-YDPVLPDCDKALRL---DEDNMKAHLY 119 (240)
Q Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~-~~~A~~~~~~~~~~---~~~~~~~~~~ 119 (240)
..++..+..+...+=.|+++.+..+|++++...| +...|..........++ .+.....|+.++.. +|.+...|..
T Consensus 12 ~~aR~vyer~l~~~P~~~~e~~~~iferal~~~p-s~~LW~~Y~~f~~~~~~~~~~i~~~fe~al~~vg~d~~s~~iW~~ 90 (493)
T 2uy1_A 12 SSPSAIMEHARRLYMSKDYRSLESLFGRCLKKSY-NLDLWMLYIEYVRKVSQKKFKLYEVYEFTLGQFENYWDSYGLYKE 90 (493)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHSTTCC-CHHHHHHHHHHHHHHC----CTHHHHHHHHHHSTTCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHhccCC-CHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHcCCCcccHHHHHH
Confidence 3455556566666666899999999999999888 67788777766666653 46677788888864 5677788877
Q ss_pred HHHHHH----HcCCHHHHHHHHHHHHHcCCCchHHHHHhc-------------------------------------c-C
Q psy17412 120 KARAMH----SLGQREEAKEYVRQLVEKYPTRRKLAIEQV-------------------------------------R-D 157 (240)
Q Consensus 120 la~~~~----~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~-------------------------------------~-~ 157 (240)
....+. ..++.+.+...|++++..-+.+.......+ + .
T Consensus 91 Yi~f~~~~~~~~~~~~~vR~iy~rAL~~P~~~~~~lw~~Y~~fE~~~~~~~~~~~~~~~~~~y~~ar~~y~~~~~~~~~~ 170 (493)
T 2uy1_A 91 YIEEEGKIEDEQTRIEKIRNGYMRALQTPMGSLSELWKDFENFELELNKITGKKIVGDTLPIFQSSFQRYQQIQPLIRGW 170 (493)
T ss_dssp HHHHTSSCSSHHHHHHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhchhhhHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHhccccHHHHHHHHhHHHHHHHHHHHHHHHHHhhc
Confidence 776644 356788899999999985322211100000 0 0
Q ss_pred chHHHHHHHHHHHHhcc---------cCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH
Q psy17412 158 SPVLYTNRALTLLHLQL---------YDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRK 228 (240)
Q Consensus 158 ~~~~~~~la~~~~~~~~---------~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~ 228 (240)
....|..... ...++ .+.....|++++...|..+.+|...+..+...|+.++|...|++++.. |.+..
T Consensus 171 s~~~W~~y~~--~E~~~~~~~~~~~~~~Rv~~~ye~al~~~p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~ 247 (493)
T 2uy1_A 171 SVKNAARLID--LEMENGMKLGGRPHESRMHFIHNYILDSFYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMF 247 (493)
T ss_dssp SHHHHHHHHH--HHHTCTTCCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSH
T ss_pred cHHHHHHHHH--HHhcCCccCcchhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHH
Confidence 1112222222 22222 123567899999999999999999999999999999999999999999 99988
Q ss_pred HHHHHHHhh
Q psy17412 229 LVENYTQAF 237 (240)
Q Consensus 229 ~~~~l~~~~ 237 (240)
.+..++...
T Consensus 248 l~~~y~~~~ 256 (493)
T 2uy1_A 248 LSLYYGLVM 256 (493)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHhhc
Confidence 888777653
No 221
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=98.78 E-value=6.3e-07 Score=58.09 Aligned_cols=122 Identities=14% Similarity=0.028 Sum_probs=97.2
Q ss_pred cCcccHHHHHHHHHHHHHcCCH------HHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHH
Q psy17412 109 LDEDNMKAHLYKARAMHSLGQR------EEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDC 182 (240)
Q Consensus 109 ~~~~~~~~~~~la~~~~~~~~~------~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~ 182 (240)
..|++++.|..........|+. ++-++.|++++..-|-.. -........+|...|.. ...++.++|...|
T Consensus 8 ~~p~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k---~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy 83 (161)
T 4h7y_A 8 MMANNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDK---YGQNESFARIQVRFAEL-KAIQEPDDARDYF 83 (161)
T ss_dssp --CCSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGG---GTTCHHHHHHHHHHHHH-HHHHCGGGCHHHH
T ss_pred eCCCCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccc---cccHHHHHHHHHHHHHH-HHhcCHHHHHHHH
Confidence 4688888888888888888888 888889999998777642 11222234556666654 5669999999999
Q ss_pred HHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q psy17412 183 DKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYT 234 (240)
Q Consensus 183 ~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~ 234 (240)
+.+++.+...+.+|...|.....+|+.+.|.+.+.+++.+.|...+......
T Consensus 84 ~~a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~le~a~ 135 (161)
T 4h7y_A 84 QMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEMLEIAL 135 (161)
T ss_dssp HHHHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHHHHHHH
Confidence 9999888889999999999999999999999999999999998776655443
No 222
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.76 E-value=2.5e-07 Score=58.61 Aligned_cols=95 Identities=15% Similarity=0.099 Sum_probs=79.0
Q ss_pred CCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCc---hhhHHHHHhhcC-h-hhHHHHHHHHHH
Q psy17412 128 GQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDP---VLPDCDKALRLD-E-DNMKAHLYKARA 202 (240)
Q Consensus 128 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~---A~~~~~~~l~~~-~-~~~~~~~~la~~ 202 (240)
.....+...|.+....++..... .+++|+++.+..+... ++..++..++.+ | ..-+.++.+|..
T Consensus 15 ~~l~~~~~~y~~e~~~~~~s~~~-----------~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg 83 (126)
T 1nzn_A 15 EDLLKFEKKFQSEKAAGSVSKST-----------QFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVG 83 (126)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHH-----------HHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCcHHH-----------HHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHH
Confidence 33456667777777766666666 9999999998876655 999999999987 6 578899999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy17412 203 MHNLGQREEAKEYIRELVEKYPTRRKLVENY 233 (240)
Q Consensus 203 ~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l 233 (240)
++++|+|++|..+++.+++..|++.++....
T Consensus 84 ~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk 114 (126)
T 1nzn_A 84 NYRLKEYEKALKYVRGLLQTEPQNNQAKELE 114 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 9999999999999999999999998876543
No 223
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=98.68 E-value=4e-06 Score=67.00 Aligned_cols=161 Identities=12% Similarity=-0.006 Sum_probs=125.4
Q ss_pred HHHhHhHHHHhCCHHHHHHHHHHHHHhcC-CChHHHHHHHHHHHHccC---------cCchHHHHHHHHhcC-cccHHHH
Q psy17412 49 FKANGNKAFQSGQYEAALVQYDKAIEQVR-DSPVLYTNRALTLLHLQL---------YDPVLPDCDKALRLD-EDNMKAH 117 (240)
Q Consensus 49 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~~-~~~~~~~~la~~~~~~~~---------~~~A~~~~~~~~~~~-~~~~~~~ 117 (240)
+...-..+.+.|++++|+++|++..+..- -+...|..+-.++...+. .++|.+.|++..... +.+...|
T Consensus 29 l~~~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~ty 108 (501)
T 4g26_A 29 LKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATF 108 (501)
T ss_dssp HHHHHHHTTTSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHHH
Confidence 44445677889999999999999887632 234556666666655443 456888888876543 2356788
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcC--CCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhc--ChhhH
Q psy17412 118 LYKARAMHSLGQREEAKEYVRQLVEKY--PTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRL--DEDNM 193 (240)
Q Consensus 118 ~~la~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~--~~~~~ 193 (240)
..+...+.+.|++++|...+++..+.. |+ ...|..+...+.+.|+.++|.+.+....+. .|+ .
T Consensus 109 n~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd------------~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd-~ 175 (501)
T 4g26_A 109 TNGARLAVAKDDPEMAFDMVKQMKAFGIQPR------------LRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPE-E 175 (501)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHTTCCCC------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCC-H
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHcCCCCc------------cceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCC-H
Confidence 889999999999999999999987753 33 334888889999999999999999998765 344 6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q psy17412 194 KAHLYKARAMHNLGQREEAKEYIRELVEK 222 (240)
Q Consensus 194 ~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 222 (240)
..+..+...+.+.|+.++|.+.+++..+.
T Consensus 176 ~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~ 204 (501)
T 4g26_A 176 PELAALLKVSMDTKNADKVYKTLQRLRDL 204 (501)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCHHHHHHHHHHHHHh
Confidence 67888999999999999999999987654
No 224
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.63 E-value=1.4e-06 Score=55.16 Aligned_cols=91 Identities=16% Similarity=0.114 Sum_probs=72.1
Q ss_pred CCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCc---hHHHHHHHHhcC-c-ccHHHHHHHHHHHHHcCCHHHHH
Q psy17412 60 GQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDP---VLPDCDKALRLD-E-DNMKAHLYKARAMHSLGQREEAK 134 (240)
Q Consensus 60 ~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~---A~~~~~~~~~~~-~-~~~~~~~~la~~~~~~~~~~~A~ 134 (240)
.....+.+.|.+....++.+..+.+++|+++....+... ++..++..+... | ..-++.+.+|..++++|+|++|.
T Consensus 15 ~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~ 94 (126)
T 1nzn_A 15 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKAL 94 (126)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHH
Confidence 344556667777777777778888888888888776555 888888888776 5 45678888999999999999999
Q ss_pred HHHHHHHHcCCCchHH
Q psy17412 135 EYVRQLVEKYPTRRKL 150 (240)
Q Consensus 135 ~~~~~a~~~~~~~~~~ 150 (240)
.+++.+++..|++..+
T Consensus 95 ~~~~~lL~~eP~n~QA 110 (126)
T 1nzn_A 95 KYVRGLLQTEPQNNQA 110 (126)
T ss_dssp HHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHhCCCCHHH
Confidence 9999999999988766
No 225
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=98.57 E-value=7.2e-06 Score=53.20 Aligned_cols=122 Identities=17% Similarity=0.049 Sum_probs=98.5
Q ss_pred hchhHHHHHHHhHhHHHHhCCH------HHHHHHHHHHHHhcCCC--------hHHHHHHHHHHHHccCcCchHHHHHHH
Q psy17412 41 ARQDIADHFKANGNKAFQSGQY------EAALVQYDKAIEQVRDS--------PVLYTNRALTLLHLQLYDPVLPDCDKA 106 (240)
Q Consensus 41 ~~~~~~~~~~~~a~~~~~~~~~------~~A~~~~~~a~~~~~~~--------~~~~~~la~~~~~~~~~~~A~~~~~~~ 106 (240)
..|.+.+.|..........|+. ++-++.|++++..-|-. ...|...|.. ...++.++|.+.|+.+
T Consensus 8 ~~p~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a 86 (161)
T 4h7y_A 8 MMANNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMA 86 (161)
T ss_dssp --CCSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHH
T ss_pred eCCCCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHH
Confidence 4567788888888888888988 89999999999987643 3355556644 5679999999999999
Q ss_pred HhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhccc
Q psy17412 107 LRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLY 175 (240)
Q Consensus 107 ~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~ 175 (240)
+++....+.+|...|....++|+...|.+.+.+++.+.|.... ....+...++.|..
T Consensus 87 ~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~------------~le~a~~nl~~~~~ 143 (161)
T 4h7y_A 87 RANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLE------------MLEIALRNLNLQKK 143 (161)
T ss_dssp HHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHH------------HHHHHHHHHHTTCS
T ss_pred HHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHH------------HHHHHHHhhhcCCC
Confidence 9888888999999999999999999999999999999998544 45566666666553
No 226
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.37 E-value=3.4e-06 Score=55.85 Aligned_cols=92 Identities=14% Similarity=0.144 Sum_probs=62.3
Q ss_pred HHHhHhHHHHhCCHHHHHHHHHHHHHhcCCCh---------HHHHHHHHHHHHccCcCchHHHHHHHHhcC---------
Q psy17412 49 FKANGNKAFQSGQYEAALVQYDKAIEQVRDSP---------VLYTNRALTLLHLQLYDPVLPDCDKALRLD--------- 110 (240)
Q Consensus 49 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~---------~~~~~la~~~~~~~~~~~A~~~~~~~~~~~--------- 110 (240)
++.....++..|.|+.|+-....++....+++ .++..+|..++..++|.+|...|++++...
T Consensus 23 l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~ 102 (167)
T 3ffl_A 23 VIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKV 102 (167)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC------
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 44455566667777777777666655533222 255667777777777777777777765321
Q ss_pred ----------------cccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy17412 111 ----------------EDNMKAHLYKARAMHSLGQREEAKEYVRQL 140 (240)
Q Consensus 111 ----------------~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 140 (240)
+...++.+.++.|+..++++.+|+..++.+
T Consensus 103 ~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~I 148 (167)
T 3ffl_A 103 RPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGI 148 (167)
T ss_dssp --------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTS
T ss_pred cccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 122368899999999999999999998754
No 227
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.29 E-value=1.8e-06 Score=57.18 Aligned_cols=138 Identities=11% Similarity=0.046 Sum_probs=86.8
Q ss_pred hHHHHHHHHHHHHccCcCchHHHHHHHHhcCccc---------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHH
Q psy17412 80 PVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN---------MKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKL 150 (240)
Q Consensus 80 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~---------~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 150 (240)
..+++.-....+..|.|+.|+-....++.+..++ ..++..+|..++..++|..|...|+++++....-...
T Consensus 20 ~~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~ 99 (167)
T 3ffl_A 20 HMNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKT 99 (167)
T ss_dssp -CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcC
Confidence 3456666777788899999999988877664332 2478899999999999999999999998753321111
Q ss_pred HHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHH
Q psy17412 151 AIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLV 230 (240)
Q Consensus 151 ~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~ 230 (240)
+.....++. ...+.. .... +.+.++.+.++.|+..+|++++|+..++.+-. ....+.+.
T Consensus 100 --------~s~~~~~~~----~ss~p~-------s~~~-~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip~-k~Rt~kvn 158 (167)
T 3ffl_A 100 --------SKVRPSTGN----SASTPQ-------SQCL-PSEIEVKYKLAECYTVLKQDKDAIAILDGIPS-RQRTPKIN 158 (167)
T ss_dssp ------------------------------------CC-CCHHHHHHHHHHHHHHTTCHHHHHHHHHTSCG-GGCCHHHH
T ss_pred --------CCccccccc----cCCCcc-------cccc-cchHHHHHHHHHHHHHHCCHHHHHHHHhcCCc-hhcCHHHH
Confidence 000111110 000000 1111 34567788888888888888888888765322 23456777
Q ss_pred HHHHHhhh
Q psy17412 231 ENYTQAFE 238 (240)
Q Consensus 231 ~~l~~~~~ 238 (240)
..+++++.
T Consensus 159 m~LakLy~ 166 (167)
T 3ffl_A 159 MLLANLYK 166 (167)
T ss_dssp HHHHHHCC
T ss_pred HHHHHHhc
Confidence 77777764
No 228
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.24 E-value=1.2e-05 Score=51.14 Aligned_cols=74 Identities=16% Similarity=0.071 Sum_probs=64.3
Q ss_pred hHHHHHHHHHHHHhcc---cCchhhHHHHHhhcChh-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHH
Q psy17412 159 PVLYTNRALTLLHLQL---YDPVLPDCDKALRLDED-NMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVEN 232 (240)
Q Consensus 159 ~~~~~~la~~~~~~~~---~~~A~~~~~~~l~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~ 232 (240)
+...+++|+++.+..+ ..+++..++..++.+|. .-+.++.+|..+.++|+|++|..+.+.+++..|++.++...
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~L 117 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGAL 117 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHH
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHH
Confidence 4558999999998754 45789999999998884 58899999999999999999999999999999999887554
No 229
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.12 E-value=2.9e-05 Score=50.00 Aligned_cols=74 Identities=16% Similarity=0.068 Sum_probs=64.0
Q ss_pred hHHHHHHHHHHHHhcc---cCchhhHHHHHhhcCh-hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHH
Q psy17412 159 PVLYTNRALTLLHLQL---YDPVLPDCDKALRLDE-DNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVEN 232 (240)
Q Consensus 159 ~~~~~~la~~~~~~~~---~~~A~~~~~~~l~~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~ 232 (240)
+...+++|+++.+..+ ..+++..++..++..| ..-+.++.+|..++++|+|++|..+.+.+++..|++.++...
T Consensus 39 ~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~L 116 (144)
T 1y8m_A 39 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGAL 116 (144)
T ss_dssp HHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 4458999999998754 4578999999998888 467889999999999999999999999999999999887544
No 230
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.06 E-value=4e-05 Score=48.75 Aligned_cols=81 Identities=7% Similarity=-0.025 Sum_probs=66.4
Q ss_pred hhHHHHHHHhHhHHHHhCC---HHHHHHHHHHHHHhcCC-ChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHH
Q psy17412 43 QDIADHFKANGNKAFQSGQ---YEAALVQYDKAIEQVRD-SPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHL 118 (240)
Q Consensus 43 ~~~~~~~~~~a~~~~~~~~---~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 118 (240)
...+.+.++.|.++.+..+ ..+++.+++..+...|. ..++++.+|..++++|+|++|..+.+.+++..|++..+..
T Consensus 37 ~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~ 116 (134)
T 3o48_A 37 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 116 (134)
T ss_dssp GSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHH
T ss_pred CCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHH
Confidence 3467888888988888765 45799999999988884 4778999999999999999999999999999999987765
Q ss_pred HHHHH
Q psy17412 119 YKARA 123 (240)
Q Consensus 119 ~la~~ 123 (240)
....+
T Consensus 117 Lk~~I 121 (134)
T 3o48_A 117 LKSMV 121 (134)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54443
No 231
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=97.94 E-value=0.00061 Score=54.49 Aligned_cols=143 Identities=10% Similarity=-0.028 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHccCcCchHHHHHHHHhcC-cccHHHHHHHHHHHHHcC---------CHHHHHHHHHHHHHcCCCchHHH
Q psy17412 82 LYTNRALTLLHLQLYDPVLPDCDKALRLD-EDNMKAHLYKARAMHSLG---------QREEAKEYVRQLVEKYPTRRKLA 151 (240)
Q Consensus 82 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~---------~~~~A~~~~~~a~~~~~~~~~~~ 151 (240)
.+...-..+.+.|+.++|++.|++..+.. +.+...|..+-.++...+ ..++|...|++.....-.
T Consensus 28 ~l~~~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~----- 102 (501)
T 4g26_A 28 LLKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVV----- 102 (501)
T ss_dssp HHHHHHHHTTTSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCC-----
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCC-----
Confidence 45556678889999999999999988653 224455555555554433 468899999887764321
Q ss_pred HHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhc--ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCcH
Q psy17412 152 IEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRL--DEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKY--PTRR 227 (240)
Q Consensus 152 ~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~--~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~--p~~~ 227 (240)
.+...|..+...+.+.|++++|.+.+++..+. .| +...|..+-..+.+.|+.++|.+.|++..+.. |+ .
T Consensus 103 -----Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~P-d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd-~ 175 (501)
T 4g26_A 103 -----PNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQP-RLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPE-E 175 (501)
T ss_dssp -----CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCC-H
T ss_pred -----CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC-ccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCC-H
Confidence 12334889999999999999999999998765 34 46678888899999999999999999988653 43 3
Q ss_pred HHHHHHHHh
Q psy17412 228 KLVENYTQA 236 (240)
Q Consensus 228 ~~~~~l~~~ 236 (240)
..+..+...
T Consensus 176 ~ty~~Li~~ 184 (501)
T 4g26_A 176 PELAALLKV 184 (501)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 344444433
No 232
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.94 E-value=0.00028 Score=45.49 Aligned_cols=73 Identities=7% Similarity=-0.028 Sum_probs=37.5
Q ss_pred hHHHHHHHhHhHHHHhCC---HHHHHHHHHHHHHhcCC-ChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHH
Q psy17412 44 DIADHFKANGNKAFQSGQ---YEAALVQYDKAIEQVRD-SPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKA 116 (240)
Q Consensus 44 ~~~~~~~~~a~~~~~~~~---~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 116 (240)
...++.++.|.++....+ ..+++.+++..+...|. ..++++.+|..++++|+|++|..+.+.+++..|++..+
T Consensus 37 vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA 113 (144)
T 1y8m_A 37 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQV 113 (144)
T ss_dssp SCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHH
Confidence 345555555555555443 23455555555555442 23455555555555555555555555555555555443
No 233
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=97.78 E-value=0.00031 Score=58.47 Aligned_cols=125 Identities=13% Similarity=0.006 Sum_probs=90.2
Q ss_pred ccC-cCchHHHHHHHHhcCcccHHHHHHHHHHHH--H-cCCHHHHHHHHHHHHHc--------CCCchHHHHHhccCchH
Q psy17412 93 LQL-YDPVLPDCDKALRLDEDNMKAHLYKARAMH--S-LGQREEAKEYVRQLVEK--------YPTRRKLAIEQVRDSPV 160 (240)
Q Consensus 93 ~~~-~~~A~~~~~~~~~~~~~~~~~~~~la~~~~--~-~~~~~~A~~~~~~a~~~--------~~~~~~~~~~~~~~~~~ 160 (240)
.++ ++.|+..+++....+|.... ++..+.+.. . ..+--+|+..+.+.++. .+.+... ....+....
T Consensus 261 t~~~~~~a~~~le~L~~~~p~~~~-~~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~-~~~~~~~~~ 338 (754)
T 4gns_B 261 TPSLVDFTIDYLKGLTKKDPIHDI-YYKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADS-ARLMNCMSD 338 (754)
T ss_dssp CGGGHHHHHHHHHHHHHHCGGGHH-HHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHH-HHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhhCCchhH-HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhccccccc-ccccCcchH
Confidence 445 57799999999998887643 222222221 2 23445677777777642 2333222 222333345
Q ss_pred HHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy17412 161 LYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIREL 219 (240)
Q Consensus 161 ~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~ 219 (240)
++..-+..+...|+|+-|+++.++++...|.....|..|+.+|..+|+++.|+-.+..+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 67777888888999999999999999999999999999999999999999999877665
No 234
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=97.62 E-value=0.0036 Score=48.13 Aligned_cols=172 Identities=10% Similarity=-0.024 Sum_probs=117.5
Q ss_pred HHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHH-----HHHHHHHHHHc-cCcCchHHHHHHHHhcCcccH----
Q psy17412 45 IADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVL-----YTNRALTLLHL-QLYDPVLPDCDKALRLDEDNM---- 114 (240)
Q Consensus 45 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~-----~~~la~~~~~~-~~~~~A~~~~~~~~~~~~~~~---- 114 (240)
.-.+.+.+|..|...|++++-.+++.......+.-+.+ ...+-..+... +..+.-++.+..+++...+.-
T Consensus 18 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~fl 97 (394)
T 3txn_A 18 KEQGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTFL 97 (394)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34678899999999999999999988776654443322 22333333322 223333445555554332221
Q ss_pred H--HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC--chHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcC-
Q psy17412 115 K--AHLYKARAMHSLGQREEAKEYVRQLVEKYPT--RRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLD- 189 (240)
Q Consensus 115 ~--~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~- 189 (240)
. .-..+|..|+..|+|.+|...+.+..+-... +.. ...+++.....+|...+++.++...+.++....
T Consensus 98 r~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~-------~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ 170 (394)
T 3txn_A 98 RQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKN-------LLVEVQLLESKTYHALSNLPKARAALTSARTTAN 170 (394)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTH-------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccch-------hHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhc
Confidence 1 2337899999999999999999988874322 111 124567888889999999999999998886442
Q ss_pred -----hh-hHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhC
Q psy17412 190 -----ED-NMKAHLYKARAMH-NLGQREEAKEYIRELVEKY 223 (240)
Q Consensus 190 -----~~-~~~~~~~la~~~~-~~g~~~~A~~~~~~~~~~~ 223 (240)
|. .+.....-|..++ ..++|.+|..+|-+++...
T Consensus 171 ai~~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f 211 (394)
T 3txn_A 171 AIYCPPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEGF 211 (394)
T ss_dssp HSCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhcc
Confidence 22 2445667788888 8999999999998887554
No 235
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=97.61 E-value=0.0057 Score=40.71 Aligned_cols=173 Identities=14% Similarity=0.032 Sum_probs=113.2
Q ss_pred hhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHh--cC----------
Q psy17412 43 QDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALR--LD---------- 110 (240)
Q Consensus 43 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~--~~---------- 110 (240)
+..++.-..++..++-.|.|..++-.+.. -+.....+..+.||...++|..|+..+++.+. .+
T Consensus 30 ~~~~eY~lL~~I~LyyngEY~R~Lf~L~~-----lNT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~ 104 (242)
T 3kae_A 30 PCKPEYRMLMSIVLYLNGEYTRALFHLHK-----LNTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQ 104 (242)
T ss_dssp ----CTHHHHHHHHHHTTCHHHHHHHHHT-----CCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHH
T ss_pred cCChHHHhhhhhhhhhcchHhHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccc
Confidence 33445566788899999999999876533 24566777789999999999999999999983 22
Q ss_pred -----cccHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHh----ccCch---------------HHHHHH
Q psy17412 111 -----EDNMK-AHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQ----VRDSP---------------VLYTNR 165 (240)
Q Consensus 111 -----~~~~~-~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~----~~~~~---------------~~~~~l 165 (240)
|.+.+ .+..+|.++.+.|+.++|+.++.......|-.+....-. .|... ..+...
T Consensus 105 ~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~vEnliyeN~vp~~~d~~~i~~~~~~~i~~~y~~d~ 184 (242)
T 3kae_A 105 EMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSPVENLLLENKVPQKRDKENVRQTGRRGIEEEYVSDS 184 (242)
T ss_dssp TTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHTTCCCCCC-----------CHHHHHHHHH
T ss_pred eeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccchHHHHHhhcCCCcccchHHHHhhhhccchhhhhhhH
Confidence 33333 456689999999999999999999999888655441000 01000 000000
Q ss_pred HHHHHHhcccCchhhHHHHHhhcChhhHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q psy17412 166 ALTLLHLQLYDPVLPDCDKALRLDEDNMK-AHLYKARAMHNLGQREEAKEYIRELVEKYPT 225 (240)
Q Consensus 166 a~~~~~~~~~~~A~~~~~~~l~~~~~~~~-~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~ 225 (240)
...+..... ...++-.+.-|.-.. .....+..++.+|-.++...+|..+-+.+|.
T Consensus 185 ~~lHe~~s~-----~~ikkY~n~iPGiGSY~va~aa~~yf~lg~~d~s~~lf~~lR~kDP~ 240 (242)
T 3kae_A 185 IEFHESLSP-----SLVKKYMEHVPGIGSYFISNAARRYFNLGMNDKSKACFELVRRKDPM 240 (242)
T ss_dssp HHHHHHCCH-----HHHHHHHTSTTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHhccH-----HHHHHHHHhCCCchhHHHHHHHHHHHhcccchhHHHHHHHHHhcCCC
Confidence 000000000 233344444455333 2345677899999999999999999999885
No 236
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=97.36 E-value=0.0046 Score=51.63 Aligned_cols=80 Identities=14% Similarity=0.094 Sum_probs=64.4
Q ss_pred CHHHHHHHHHHHHHh--------cCC----------ChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHH
Q psy17412 61 QYEAALVQYDKAIEQ--------VRD----------SPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKAR 122 (240)
Q Consensus 61 ~~~~A~~~~~~a~~~--------~~~----------~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 122 (240)
+--+|+..+.++++. .+. ....+..-+..+...|+++-|+++.++++...|.....|+.|+.
T Consensus 300 ~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~ 379 (754)
T 4gns_B 300 KELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLAR 379 (754)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHH
Confidence 345677777777642 111 12345556777788999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHH
Q psy17412 123 AMHSLGQREEAKEYVRQL 140 (240)
Q Consensus 123 ~~~~~~~~~~A~~~~~~a 140 (240)
+|..+|+|+.|+-.++.+
T Consensus 380 vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 380 CHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHTTCHHHHHHHHHHS
T ss_pred HHHHhccHHHHHHHHhcC
Confidence 999999999999888776
No 237
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=97.30 E-value=0.01 Score=40.00 Aligned_cols=102 Identities=9% Similarity=-0.051 Sum_probs=71.9
Q ss_pred HHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHH
Q psy17412 55 KAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAK 134 (240)
Q Consensus 55 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~ 134 (240)
.....|+++.|.+..+.. ++...|..+|......|+++-|..+|+++-. +-.+..+|...|+.+.-.
T Consensus 14 LAL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D--------~~~L~~Ly~~tg~~e~L~ 80 (177)
T 3mkq_B 14 LALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQHS--------FDKLSFLYLVTGDVNKLS 80 (177)
T ss_dssp HHHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTC--------HHHHHHHHHHHTCHHHHH
T ss_pred HHHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhCC--------HHHHHHHHHHhCCHHHHH
Confidence 446789999999887654 5678899999999999999999999988743 233445566667765544
Q ss_pred HHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHH
Q psy17412 135 EYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKA 185 (240)
Q Consensus 135 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 185 (240)
...+.+.... + +.....+++.+|+++++++.|.+.
T Consensus 81 kla~iA~~~g-~---------------~n~af~~~l~lGdv~~~i~lL~~~ 115 (177)
T 3mkq_B 81 KMQNIAQTRE-D---------------FGSMLLNTFYNNSTKERSSIFAEG 115 (177)
T ss_dssp HHHHHHHHTT-C---------------HHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHHCc-c---------------HHHHHHHHHHcCCHHHHHHHHHHC
Confidence 4444443322 2 444556777889999988888654
No 238
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=97.29 E-value=0.0044 Score=44.63 Aligned_cols=120 Identities=11% Similarity=0.021 Sum_probs=78.3
Q ss_pred HHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHH
Q psy17412 89 TLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALT 168 (240)
Q Consensus 89 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~ 168 (240)
..++.|+.++|++.....++.+|.+......+..+++-.|+|+.|...++.+.+++|..... ...|..+..+
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~--------a~~yr~lI~a 77 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPG--------ASQLRHLVKA 77 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHH--------HHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHH--------HHHHHHHHHH
Confidence 34566778888888888888888888888888888888888888888888888888874333 1111111111
Q ss_pred HHHhcccCchhhHHHHHhh--c------ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Q psy17412 169 LLHLQLYDPVLPDCDKALR--L------DEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTR 226 (240)
Q Consensus 169 ~~~~~~~~~A~~~~~~~l~--~------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~ 226 (240)
-... ..++. . .|........-+......|+.++|...-.++++..|..
T Consensus 78 E~~R----------~~vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~ap~~ 133 (273)
T 1zbp_A 78 AQAR----------KDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEK 133 (273)
T ss_dssp HHHH----------HHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCC
T ss_pred HHHH----------HHHHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhcCccc
Confidence 1110 11111 1 12223334455666777899999999999998887754
No 239
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=97.19 E-value=0.019 Score=38.30 Aligned_cols=78 Identities=14% Similarity=0.151 Sum_probs=48.3
Q ss_pred HHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHH
Q psy17412 57 FQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEY 136 (240)
Q Consensus 57 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~ 136 (240)
++-.+|+.++=+-.-. .|..+.....++.+.+..|.|..++-.+.+. +...+.+..+.|+...++|..|+..
T Consensus 13 ~kY~dYdt~~fLsa~L---~~~~~eY~lL~~I~LyyngEY~R~Lf~L~~l-----NT~Ts~YYk~LCy~klKdYkkA~~~ 84 (242)
T 3kae_A 13 IRYRDYETAIFLAACL---LPCKPEYRMLMSIVLYLNGEYTRALFHLHKL-----NTCTSKYYESLCYKKKKDYKKAIKS 84 (242)
T ss_dssp HHTTCHHHHHHHHHHH---C----CTHHHHHHHHHHTTCHHHHHHHHHTC-----CBHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hhcccccHHHHHHHHH---ccCChHHHhhhhhhhhhcchHhHHHHHHHhc-----chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666664332222 2333455556777777788887776655432 4556677777888888888888888
Q ss_pred HHHHHH
Q psy17412 137 VRQLVE 142 (240)
Q Consensus 137 ~~~a~~ 142 (240)
++..++
T Consensus 85 le~il~ 90 (242)
T 3kae_A 85 LESILE 90 (242)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 888873
No 240
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=97.05 E-value=0.014 Score=39.42 Aligned_cols=47 Identities=13% Similarity=0.055 Sum_probs=40.4
Q ss_pred HHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy17412 89 TLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQL 140 (240)
Q Consensus 89 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 140 (240)
...+.|+++.|.+..+.. ++...|..+|......|+++-|..+|.++
T Consensus 14 LAL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 14 LALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQ 60 (177)
T ss_dssp HHHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred HHHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHh
Confidence 346789999999887765 56788999999999999999999999875
No 241
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.01 E-value=0.014 Score=45.04 Aligned_cols=94 Identities=15% Similarity=0.069 Sum_probs=76.1
Q ss_pred HHHhHhHHHHhCCHHHHHHHHHHHHHhcCCC----------------------hHHHHHHHHHHHHccCcCchHHHHHHH
Q psy17412 49 FKANGNKAFQSGQYEAALVQYDKAIEQVRDS----------------------PVLYTNRALTLLHLQLYDPVLPDCDKA 106 (240)
Q Consensus 49 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~----------------------~~~~~~la~~~~~~~~~~~A~~~~~~~ 106 (240)
+...|......|+.+.|...+.+++...... ..+...++..+...|++.+++..+..+
T Consensus 118 l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~ 197 (388)
T 2ff4_A 118 EKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEAL 197 (388)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 3334445556789999999999999874221 113345667788899999999999999
Q ss_pred HhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17412 107 LRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVE 142 (240)
Q Consensus 107 ~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 142 (240)
+..+|-+..++..+-.++...|+..+|+..|+++.+
T Consensus 198 ~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 198 TFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988755
No 242
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.00 E-value=0.014 Score=45.02 Aligned_cols=101 Identities=12% Similarity=0.010 Sum_probs=75.7
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCchHHHH------H-----hccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcC
Q psy17412 121 ARAMHSLGQREEAKEYVRQLVEKYPTRRKLAI------E-----QVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLD 189 (240)
Q Consensus 121 a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~------~-----~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~ 189 (240)
|......|+.+.|...+.+++.+.....-... . .......+...++..+...|++.+++..+..++..+
T Consensus 122 ~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~ 201 (388)
T 2ff4_A 122 GVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFEH 201 (388)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC
Confidence 33344567888888888888887644321100 0 000112345567778888999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17412 190 EDNMKAHLYKARAMHNLGQREEAKEYIRELVE 221 (240)
Q Consensus 190 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~ 221 (240)
|-+..++..+..++...|+..+|+..|+++.+
T Consensus 202 P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 202 PYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999988754
No 243
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=96.92 E-value=0.0083 Score=47.70 Aligned_cols=80 Identities=14% Similarity=-0.017 Sum_probs=69.7
Q ss_pred HHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHH
Q psy17412 47 DHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHS 126 (240)
Q Consensus 47 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 126 (240)
..+..+|........++.|..+|.+|....|+++..+..+|.+....|+.-+|+-+|-+++......+.+..++...+..
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 46678899999999999999999999999999999999999999999999999999999987776677777777766654
No 244
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=96.88 E-value=0.003 Score=45.46 Aligned_cols=70 Identities=11% Similarity=0.042 Sum_probs=61.5
Q ss_pred HHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhh
Q psy17412 168 TLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAF 237 (240)
Q Consensus 168 ~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~ 237 (240)
...+.|+.++|++.+...++.+|.+......+..+++-.|+++.|.+.++.+.+++|+....-..+..++
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI 75 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLV 75 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHH
Confidence 3457789999999999999999999999999999999999999999999999999998866555555443
No 245
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.86 E-value=0.012 Score=49.77 Aligned_cols=75 Identities=12% Similarity=-0.180 Sum_probs=39.2
Q ss_pred HHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCC
Q psy17412 50 KANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQ 129 (240)
Q Consensus 50 ~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~ 129 (240)
......+...|.++.|++..+ ++... .......|+++.|.+..+. .++...|..+|..+.+.++
T Consensus 633 ~~~~~~l~~~~~~~~a~~~~~--------~~~~~---f~~~l~~~~~~~A~~~~~~-----~~~~~~W~~la~~al~~~~ 696 (814)
T 3mkq_A 633 TKIARFLEGQEYYEEALNISP--------DQDQK---FELALKVGQLTLARDLLTD-----ESAEMKWRALGDASLQRFN 696 (814)
T ss_dssp HHHHHHHHHTTCHHHHHHHCC--------CHHHH---HHHHHHHTCHHHHHHHHTT-----CCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCChHHheecCC--------Ccchh---eehhhhcCCHHHHHHHHHh-----hCcHhHHHHHHHHHHHcCC
Confidence 334444555566666554432 11111 2233455666666555432 2345566666666666666
Q ss_pred HHHHHHHHHHH
Q psy17412 130 REEAKEYVRQL 140 (240)
Q Consensus 130 ~~~A~~~~~~a 140 (240)
++.|+.+|.++
T Consensus 697 ~~~A~~~y~~~ 707 (814)
T 3mkq_A 697 FKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 66666666654
No 246
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=96.86 E-value=0.0043 Score=49.30 Aligned_cols=78 Identities=10% Similarity=-0.112 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhh
Q psy17412 161 LYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFE 238 (240)
Q Consensus 161 ~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 238 (240)
.+..+|.+......+..|..+|.+|..+.|++...+..+|.+....|+.-+|+-+|-+++......+.++.++..++.
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~ 231 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS 231 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Confidence 467788888888888999999999999999999999999999999999999999999999887778888888887765
No 247
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.81 E-value=0.1 Score=41.10 Aligned_cols=172 Identities=8% Similarity=-0.046 Sum_probs=108.5
Q ss_pred HHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcC--CC----hHHHHHHHHHHHHccCcCchHHHHHHHHh---cCccc--
Q psy17412 45 IADHFKANGNKAFQSGQYEAALVQYDKAIEQVR--DS----PVLYTNRALTLLHLQLYDPVLPDCDKALR---LDEDN-- 113 (240)
Q Consensus 45 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~--~~----~~~~~~la~~~~~~~~~~~A~~~~~~~~~---~~~~~-- 113 (240)
.+.....++..+...|++.+|...+.......- .+ ..++.....++...+++.+|...+.++.. ..+..
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~ 215 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYES 215 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHH
Confidence 566778899999999999999999998764321 11 56778888999999999999999988742 12222
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC--chHHHHHhccCchHHHHHHHHHHHHhcccCc-hhhHHHHHhhc
Q psy17412 114 --MKAHLYKARAMHSLGQREEAKEYVRQLVEKYPT--RRKLAIEQVRDSPVLYTNRALTLLHLQLYDP-VLPDCDKALRL 188 (240)
Q Consensus 114 --~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~-A~~~~~~~l~~ 188 (240)
...+...|.++...++|.+|..+|..++..... ++.. .......+.++.-+..++. --..+.+....
T Consensus 216 lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~~~~~~d~~~--------~~~~L~~~v~~~iLa~~~~~~~~ll~~~~~~ 287 (445)
T 4b4t_P 216 LKLEYYNLLVKISLHKREYLEVAQYLQEIYQTDAIKSDEAK--------WKPVLSHIVYFLVLSPYGNLQNDLIHKIQND 287 (445)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHSCHHH--------HHHHHHHHHHHHHHSSCSSTTHHHHHSHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcccccCCHHH--------HHHHHHHHHHHHHhCCCCchHHHHHHHHhhc
Confidence 346677889999999999999999999874321 1111 0111222222222222222 12222222211
Q ss_pred C-hhhHHHHHHHHHHHHH--cCCHHHHHHHHHHHHHhCC
Q psy17412 189 D-EDNMKAHLYKARAMHN--LGQREEAKEYIRELVEKYP 224 (240)
Q Consensus 189 ~-~~~~~~~~~la~~~~~--~g~~~~A~~~~~~~~~~~p 224 (240)
. -.....+..+..++.. +.+++.....|...+..+|
T Consensus 288 ~~~~~l~~~~~L~k~f~~~~L~~~~~~~~~~~~~L~~~~ 326 (445)
T 4b4t_P 288 NNLKKLESQESLVKLFTTNELMRWPIVQKTYEPVLNEDD 326 (445)
T ss_dssp SSCHHHHHHHHHHHHHHHCCSSSHHHHHHHTCSSTTTCC
T ss_pred ccccccHHHHHHHHHHHhchHhhhHHHHHHHHHHhcccc
Confidence 1 1235566677777665 4677887777776665544
No 248
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.62 E-value=0.039 Score=46.57 Aligned_cols=103 Identities=9% Similarity=-0.067 Sum_probs=71.7
Q ss_pred hHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHH
Q psy17412 54 NKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEA 133 (240)
Q Consensus 54 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 133 (240)
......|+++.|.+..+. .++...|..+|..+.+.++++.|..+|.++-. +-.+..++...|+.+..
T Consensus 660 ~~~l~~~~~~~A~~~~~~-----~~~~~~W~~la~~al~~~~~~~A~~~y~~~~d--------~~~l~~l~~~~~~~~~~ 726 (814)
T 3mkq_A 660 ELALKVGQLTLARDLLTD-----ESAEMKWRALGDASLQRFNFKLAIEAFTNAHD--------LESLFLLHSSFNNKEGL 726 (814)
T ss_dssp HHHHHHTCHHHHHHHHTT-----CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTC--------HHHHHHHHHHTTCHHHH
T ss_pred ehhhhcCCHHHHHHHHHh-----hCcHhHHHHHHHHHHHcCCHHHHHHHHHHccC--------hhhhHHHHHHcCCHHHH
Confidence 345778999999887533 36688999999999999999999999998732 22344555567777765
Q ss_pred HHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHH
Q psy17412 134 KEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKA 185 (240)
Q Consensus 134 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 185 (240)
....+.+... .. +.....++.+.|++++|++.|.+.
T Consensus 727 ~~~~~~a~~~-~~---------------~~~A~~~~~~~g~~~~a~~~~~~~ 762 (814)
T 3mkq_A 727 VTLAKDAETT-GK---------------FNLAFNAYWIAGDIQGAKDLLIKS 762 (814)
T ss_dssp HHHHHHHHHT-TC---------------HHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHHHc-Cc---------------hHHHHHHHHHcCCHHHHHHHHHHc
Confidence 5555444442 22 333334666778888888777654
No 249
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.61 E-value=0.014 Score=46.25 Aligned_cols=132 Identities=14% Similarity=0.082 Sum_probs=59.5
Q ss_pred HHHccCcCchHHHHHHHHh-----------cCcccHHHHHHHHHHHHHcCCHHHHHH----------HHHHHHHcCCCch
Q psy17412 90 LLHLQLYDPVLPDCDKALR-----------LDEDNMKAHLYKARAMHSLGQREEAKE----------YVRQLVEKYPTRR 148 (240)
Q Consensus 90 ~~~~~~~~~A~~~~~~~~~-----------~~~~~~~~~~~la~~~~~~~~~~~A~~----------~~~~a~~~~~~~~ 148 (240)
.+..+++++|.++....+. +++-.+.+|+..+.++...|+...... .+-.+++..--..
T Consensus 146 L~d~k~~~~~~~~~~~~~~~~~l~~~nrrtlD~l~ak~~fY~s~~~e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~lr~ 225 (523)
T 4b4t_S 146 LWDSKELEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLKH 225 (523)
T ss_dssp ---------------------------------------------------------CHHHHHHHHTHHHHHHHHCCSCS
T ss_pred HhccccHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHHHHHHhccc
Confidence 3456788888877765541 123446678888888887777665322 2222332211000
Q ss_pred HHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcC---h--hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q psy17412 149 KLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLD---E--DNMKAHLYKARAMHNLGQREEAKEYIRELVEKY 223 (240)
Q Consensus 149 ~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~---~--~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~ 223 (240)
+ ....+.++..+-..|...+.|++|.....++.--. + .....++.+|+++...++|.+|.+++..+++..
T Consensus 226 D-----~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rka 300 (523)
T 4b4t_S 226 D-----NETKAMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKA 300 (523)
T ss_dssp S-----SCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSC
T ss_pred C-----cchhHHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 0 00124568888899999999999999999984211 1 225677889999999999999999999999988
Q ss_pred CCc
Q psy17412 224 PTR 226 (240)
Q Consensus 224 p~~ 226 (240)
|.+
T Consensus 301 p~~ 303 (523)
T 4b4t_S 301 PHN 303 (523)
T ss_dssp SCS
T ss_pred Ccc
Confidence 765
No 250
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.48 E-value=0.0057 Score=47.89 Aligned_cols=99 Identities=9% Similarity=-0.005 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcC-----h
Q psy17412 116 AHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLD-----E 190 (240)
Q Consensus 116 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~-----~ 190 (240)
++..+|..+...|++++|.+.|.++.......... .+++.....++...+++..+...+.++-... |
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~k--------id~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~ 204 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAK--------IDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDW 204 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSH--------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHH--------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCH
Confidence 44555666666666666666665555433222111 2335555555555566666655555553221 1
Q ss_pred h-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q psy17412 191 D-NMKAHLYKARAMHNLGQREEAKEYIRELVEK 222 (240)
Q Consensus 191 ~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 222 (240)
. ........|.++...++|.+|..+|-.++..
T Consensus 205 ~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 205 ERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLAT 237 (429)
T ss_dssp HHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhChHHHHHHHHHHHhcc
Confidence 1 1223334455555566666666666555543
No 251
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=96.28 E-value=0.24 Score=43.96 Aligned_cols=122 Identities=14% Similarity=-0.018 Sum_probs=86.3
Q ss_pred hHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcC-----------------------
Q psy17412 54 NKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLD----------------------- 110 (240)
Q Consensus 54 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~----------------------- 110 (240)
..+...+.++-+.+ .+...|.++...+.+|.++...|++++|..+|+++..--
T Consensus 820 ~~l~~~~~~~~~~~----l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~ 895 (1139)
T 4fhn_B 820 EKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQ 895 (1139)
T ss_dssp HHHHHHSCTTHHHH----HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSC
T ss_pred HHHHHhhhHHHHHH----HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhccccccccccccc
Confidence 34555566655443 334556777777889999999999999999998874211
Q ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHH
Q psy17412 111 EDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKA 185 (240)
Q Consensus 111 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 185 (240)
...+..|.....++.+.|.++.+++..+.|++..+.+... .....|.++-......|+|++|...+...
T Consensus 896 ~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~~~~~------~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~ 964 (1139)
T 4fhn_B 896 NLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDED------LSIAITHETLKTACAAGKFDAAHVALMVL 964 (1139)
T ss_dssp CSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCSCCHH------HHHHHHHHHHHHHHHHCCSGGGGHHHHHH
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCChh------hHHHHHHHHHHHHHhhCCHHHHHHHHHhC
Confidence 0122456677788889999999999999999876543321 01235777888889999999998877543
No 252
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.19 E-value=0.013 Score=45.87 Aligned_cols=102 Identities=12% Similarity=-0.010 Sum_probs=78.4
Q ss_pred hHHHHHHHHHHHHccCcCchHHHHHHHHhcC---cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC--chHHHHHh
Q psy17412 80 PVLYTNRALTLLHLQLYDPVLPDCDKALRLD---EDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPT--RRKLAIEQ 154 (240)
Q Consensus 80 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~---~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~--~~~~~~~~ 154 (240)
..++..+|..|...|+++.|.+.|.++.... ..-.+.+.....++...+++..+...+.++...... ++..
T Consensus 131 ~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~---- 206 (429)
T 4b4t_R 131 AQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWER---- 206 (429)
T ss_dssp SSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHH----
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHH----
Confidence 4578899999999999999999999987543 234678888889999999999999999998765322 2211
Q ss_pred ccCchHHHHHHHHHHHHhcccCchhhHHHHHhhc
Q psy17412 155 VRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRL 188 (240)
Q Consensus 155 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~ 188 (240)
...+....|..+...++|..|...|..++.-
T Consensus 207 ---~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 207 ---RNRYKTYYGIHCLAVRNFKEAAKLLVDSLAT 237 (429)
T ss_dssp ---HHHHHHHHHHGGGGTSCHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHhChHHHHHHHHHHHhcc
Confidence 1233555677777889999999988877654
No 253
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=96.19 E-value=0.12 Score=45.87 Aligned_cols=132 Identities=13% Similarity=0.045 Sum_probs=91.2
Q ss_pred HHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-CCch------HH--HHH-
Q psy17412 84 TNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKY-PTRR------KL--AIE- 153 (240)
Q Consensus 84 ~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-~~~~------~~--~~~- 153 (240)
..+.......+.++-+.+ .+...|.++...+.+|.++...|++++|..+|+++-.-- .+.. .. ...
T Consensus 816 ~~l~~~l~~~~~~~~~~~----l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~ 891 (1139)
T 4fhn_B 816 TELVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEK 891 (1139)
T ss_dssp HHHHHHHHHHSCTTHHHH----HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHT
T ss_pred HHHHHHHHHhhhHHHHHH----HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhccccccccc
Confidence 345556667777766544 334456666677999999999999999999999874321 1110 00 000
Q ss_pred --hccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChh-h----HHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy17412 154 --QVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDED-N----MKAHLYKARAMHNLGQREEAKEYIREL 219 (240)
Q Consensus 154 --~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~-~----~~~~~~la~~~~~~g~~~~A~~~~~~~ 219 (240)
.....+..|..+..++.+.+.++.+++..+.+++..+. + ...|..+=..+..+|+|++|...+...
T Consensus 892 ~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~ 964 (1139)
T 4fhn_B 892 YHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVL 964 (1139)
T ss_dssp TTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhC
Confidence 01123456888888999999999999999999876432 2 235777778899999999998877543
No 254
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=95.87 E-value=0.2 Score=43.45 Aligned_cols=100 Identities=9% Similarity=-0.054 Sum_probs=79.1
Q ss_pred hHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHh----cCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcC-cccHHHHH
Q psy17412 44 DIADHFKANGNKAFQSGQYEAALVQYDKAIEQ----VRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLD-EDNMKAHL 118 (240)
Q Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~----~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~ 118 (240)
.....+..+-..+.+.|+.++|.++|...... ..-+...|..+...|.+.|+.++|.+.|++..+.. ..+...|.
T Consensus 125 ~~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYn 204 (1134)
T 3spa_A 125 GQQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYA 204 (1134)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHH
Confidence 34456778888999999999999999775432 12346788899999999999999999999987654 23556777
Q ss_pred HHHHHHHHcCCH-HHHHHHHHHHHHc
Q psy17412 119 YKARAMHSLGQR-EEAKEYVRQLVEK 143 (240)
Q Consensus 119 ~la~~~~~~~~~-~~A~~~~~~a~~~ 143 (240)
.+-.++.+.|+. ++|...+++..+.
T Consensus 205 tLI~glcK~G~~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 205 AALQCMGRQDQDAGTIERCLEQMSQE 230 (1134)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHc
Confidence 788888998984 7888999888764
No 255
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=95.78 E-value=0.13 Score=44.64 Aligned_cols=96 Identities=5% Similarity=-0.202 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHccCcCchHHHHHHHHhc----CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC--CCchHHHHHh
Q psy17412 81 VLYTNRALTLLHLQLYDPVLPDCDKALRL----DEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKY--PTRRKLAIEQ 154 (240)
Q Consensus 81 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~----~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~~ 154 (240)
..+..+-..+.+.|+.++|...|....+. ...+...|..+...+.+.|+.++|...|++..+.. |+
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PD-------- 199 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPD-------- 199 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCC--------
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCc--------
Confidence 35778889999999999999999765432 23356788999999999999999999999997743 44
Q ss_pred ccCchHHHHHHHHHHHHhccc-CchhhHHHHHhhc
Q psy17412 155 VRDSPVLYTNRALTLLHLQLY-DPVLPDCDKALRL 188 (240)
Q Consensus 155 ~~~~~~~~~~la~~~~~~~~~-~~A~~~~~~~l~~ 188 (240)
...|..+..++.+.|+. ++|.+.+++..+.
T Consensus 200 ----vvTYntLI~glcK~G~~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 200 ----LLSYAAALQCMGRQDQDAGTIERCLEQMSQE 230 (1134)
T ss_dssp ----HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Confidence 33478888889998885 6788899888764
No 256
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.43 E-value=0.1 Score=41.54 Aligned_cols=131 Identities=14% Similarity=0.036 Sum_probs=53.9
Q ss_pred HHHHhCCHHHHHHHHHHHHH--h---------cCCChHHHHHHHHHHHHccCcCchHH----------HHHHHH-----h
Q psy17412 55 KAFQSGQYEAALVQYDKAIE--Q---------VRDSPVLYTNRALTLLHLQLYDPVLP----------DCDKAL-----R 108 (240)
Q Consensus 55 ~~~~~~~~~~A~~~~~~a~~--~---------~~~~~~~~~~la~~~~~~~~~~~A~~----------~~~~~~-----~ 108 (240)
.++..+++++|.++-...+. . ++-.+.+|+..+.++...|+...... .+-.++ .
T Consensus 145 ~L~d~k~~~~~~~~~~~~~~~~~l~~~nrrtlD~l~ak~~fY~s~~~e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~lr 224 (523)
T 4b4t_S 145 FLWDSKELEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLK 224 (523)
T ss_dssp ----------------------------------------------------------CHHHHHHHHTHHHHHHHHCCSC
T ss_pred HHhccccHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHHHHHHhcc
Confidence 34567788888777665541 1 22235677777777777776654321 111121 1
Q ss_pred cCc-ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhh
Q psy17412 109 LDE-DNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALR 187 (240)
Q Consensus 109 ~~~-~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~ 187 (240)
.++ .....+..+-..|...+.++.|.....++. .|.... ...+....++.+|.++.-.++|.+|.+++..++.
T Consensus 225 ~D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~----sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~r 298 (523)
T 4b4t_S 225 HDNETKAMLINLILRDFLNNGEVDSASDFISKLE--YPHTDV----SSSLEARYFFYLSKINAIQLDYSTANEYIIAAIR 298 (523)
T ss_dssp SSSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTS----CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTS
T ss_pred cCcchhHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccC----CHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 222 234566677788888888888888888874 443210 0011245577888888888999889888888888
Q ss_pred cChh
Q psy17412 188 LDED 191 (240)
Q Consensus 188 ~~~~ 191 (240)
..|.
T Consensus 299 kap~ 302 (523)
T 4b4t_S 299 KAPH 302 (523)
T ss_dssp SCSC
T ss_pred hCCc
Confidence 7664
No 257
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=95.38 E-value=0.68 Score=35.68 Aligned_cols=96 Identities=11% Similarity=0.009 Sum_probs=75.2
Q ss_pred HHhHhHHHHhCCHHHHHHHHHHHHHhcCC--C----hHHHHHHHHHHHHccCcCchHHHHHHHHhcC------cc-cHHH
Q psy17412 50 KANGNKAFQSGQYEAALVQYDKAIEQVRD--S----PVLYTNRALTLLHLQLYDPVLPDCDKALRLD------ED-NMKA 116 (240)
Q Consensus 50 ~~~a~~~~~~~~~~~A~~~~~~a~~~~~~--~----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~------~~-~~~~ 116 (240)
..+|..|+..|+|.+|.+.+.+....-.. + .+++..-..+|...+++.++...+.++.... |. ....
T Consensus 103 ~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i 182 (394)
T 3txn_A 103 ARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGAL 182 (394)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHH
Confidence 47899999999999999999998875322 1 4567777888999999999999998886432 11 1335
Q ss_pred HHHHHHHHH-HcCCHHHHHHHHHHHHHcCC
Q psy17412 117 HLYKARAMH-SLGQREEAKEYVRQLVEKYP 145 (240)
Q Consensus 117 ~~~la~~~~-~~~~~~~A~~~~~~a~~~~~ 145 (240)
...-|..+. ..++|.+|...|-++++...
T Consensus 183 ~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f~ 212 (394)
T 3txn_A 183 DLQSGILHAADERDFKTAFSYFYEAFEGFD 212 (394)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHHHHHHT
T ss_pred HHHhhHHHHHhccCHHHHHHHHHHHHhccc
Confidence 566788888 89999999999999876443
No 258
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.12 E-value=0.92 Score=35.67 Aligned_cols=172 Identities=9% Similarity=0.019 Sum_probs=109.4
Q ss_pred hhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHH---HHHH-ccCcCchHHHHHHHHhcC--------
Q psy17412 43 QDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRAL---TLLH-LQLYDPVLPDCDKALRLD-------- 110 (240)
Q Consensus 43 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~---~~~~-~~~~~~A~~~~~~~~~~~-------- 110 (240)
+.....+..+...+...|+|+...+.+.-..........+-..+.. -+.. ....+ .+.....+..-
T Consensus 53 ~s~~r~l~~iv~l~~~~~~~~~l~e~i~~Lskkr~qlk~ai~~~V~~~~~~l~~~~~~d--~~~~~~~i~~l~~vte~ki 130 (445)
T 4b4t_P 53 ASSKEVLAKIVDLLASRNKWDDLNEQLTLLSKKHGQLKLSIQYMIQKVMEYLKSSKSLD--LNTRISVIETIRVVTENKI 130 (445)
T ss_dssp TTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTTTTSHHHHHHHHHHHHHHHHHHCTTH--HHHHHHHHHCCSSSSSCCC
T ss_pred hhHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCchh--HHHHHHHHHHHHHHhccch
Confidence 3356677788888999999998877775544433222222222211 1111 11111 11112222111
Q ss_pred ---cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-cCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHh
Q psy17412 111 ---EDNMKAHLYKARAMHSLGQREEAKEYVRQLVE-KYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKAL 186 (240)
Q Consensus 111 ---~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l 186 (240)
-........++.++...|++.+|...+..... ........ ....++.....++...+++.+|...++++.
T Consensus 131 flE~erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~------~kve~~l~q~rl~l~~~d~~~a~~~~~ki~ 204 (445)
T 4b4t_P 131 FVEVERARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMS------EKIQFILEQMELSILKGDYSQATVLSRKIL 204 (445)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHH------HHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHH------HHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 12345678899999999999999999988753 22211111 124568888899999999999999998874
Q ss_pred h----cC--hh-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q psy17412 187 R----LD--ED-NMKAHLYKARAMHNLGQREEAKEYIRELVEK 222 (240)
Q Consensus 187 ~----~~--~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 222 (240)
. .. |. ....+...|.++...++|.+|..+|..++..
T Consensus 205 ~~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 205 KKTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HhhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 2 11 11 2456678899999999999999999998864
No 259
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=94.95 E-value=1.3 Score=36.47 Aligned_cols=123 Identities=11% Similarity=0.023 Sum_probs=75.0
Q ss_pred HHHHHHccCcCchHHHHHHHHhcCccc-HH---HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHH
Q psy17412 87 ALTLLHLQLYDPVLPDCDKALRLDEDN-MK---AHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLY 162 (240)
Q Consensus 87 a~~~~~~~~~~~A~~~~~~~~~~~~~~-~~---~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 162 (240)
+.-.....+.+.|...+.+.....+-+ .. .+..++.-....+...++...+.+......++.. .
T Consensus 221 ~~~rlar~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~ 288 (618)
T 1qsa_A 221 AFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSL------------I 288 (618)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHHH------------H
T ss_pred HHHHHHhcCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChHH------------H
Confidence 333344456666766666554322111 11 2222333333334345666666665543333221 2
Q ss_pred HHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17412 163 TNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVE 221 (240)
Q Consensus 163 ~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~ 221 (240)
..++...++.|+++.|..++.+.-...+......+.+|+++..+|+.++|..+|+++..
T Consensus 289 e~~~r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 289 ERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 23333445679999999999876654455688899999999999999999999999875
No 260
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=93.27 E-value=1.9 Score=32.07 Aligned_cols=63 Identities=10% Similarity=0.006 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHhcccCchhhHHHHHh----------------h---cChhhHHHHHHHHH-HHHHcCCHHHHHHHHHHH
Q psy17412 160 VLYTNRALTLLHLQLYDPVLPDCDKAL----------------R---LDEDNMKAHLYKAR-AMHNLGQREEAKEYIREL 219 (240)
Q Consensus 160 ~~~~~la~~~~~~~~~~~A~~~~~~~l----------------~---~~~~~~~~~~~la~-~~~~~g~~~~A~~~~~~~ 219 (240)
.++..+|..+.+.|++.+|..+|-..- + -.|...+.+...+. .|..+|+...|...+...
T Consensus 135 ~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf~~RaVL~yL~l~n~~~A~~~~~~f 214 (312)
T 2wpv_A 135 YLHNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDSTVAEFFSRLVFNYLFISNISFAHESKDIF 214 (312)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 335666666666666555555442110 1 24555666655555 367889999999988876
Q ss_pred HHh
Q psy17412 220 VEK 222 (240)
Q Consensus 220 ~~~ 222 (240)
.+.
T Consensus 215 ~~~ 217 (312)
T 2wpv_A 215 LER 217 (312)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 261
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=92.41 E-value=4 Score=33.62 Aligned_cols=157 Identities=13% Similarity=0.072 Sum_probs=98.0
Q ss_pred HHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHH
Q psy17412 56 AFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKE 135 (240)
Q Consensus 56 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 135 (240)
....+...++...+.+......++. ..-.++...+..|+++.|...|...-..........+.+|..+..+|+.++|..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~~~r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~ 340 (618)
T 1qsa_A 262 LMGNDVTDEQAKWRDDAIMRSQSTS-LIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKE 340 (618)
T ss_dssp SCSTTCCHHHHHHHHHHHHTCCCHH-HHHHHHHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHcCCChHHHHHHHhccccCCChH-HHHHHHHHHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHH
Confidence 3344435566777777655443333 233344445677999999999988766445567889999999999999999999
Q ss_pred HHHHHHHcCCCchHH-HHHhc---------c--C--c----hHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHH
Q psy17412 136 YVRQLVEKYPTRRKL-AIEQV---------R--D--S----PVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHL 197 (240)
Q Consensus 136 ~~~~a~~~~~~~~~~-~~~~~---------~--~--~----~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~ 197 (240)
.|+++..- .+.... +.... + . . ...-...+..+...|....|...+...+...+ ..-..
T Consensus 341 ~~~~~a~~-~~fYg~lAa~~Lg~~~~~~~~~~~~~~~~~~~~~~~~~r~~~L~~~g~~~~a~~ew~~~~~~~~--~~~~~ 417 (618)
T 1qsa_A 341 ILHQLMQQ-RGFYPMVAAQRIGEEYELKIDKAPQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLVKSKS--KTEQA 417 (618)
T ss_dssp HHHHHHTS-CSHHHHHHHHHTTCCCCCCCCCCCSCCCCHHHHSHHHHHHHHHHHTTCHHHHHHHHHHHHTTCC--HHHHH
T ss_pred HHHHHhcC-CChHHHHHHHHcCCCCCCCCCCCChhHHhhhccChHHHHHHHHHHCCChhhHHHHHHHHHhcCC--HHHHH
Confidence 99998753 221111 00000 0 0 0 01234456667777888888777776665322 23345
Q ss_pred HHHHHHHHcCCHHHHHHHH
Q psy17412 198 YKARAMHNLGQREEAKEYI 216 (240)
Q Consensus 198 ~la~~~~~~g~~~~A~~~~ 216 (240)
.++.+....|.++.++...
T Consensus 418 ~la~~a~~~~~~~~~v~~~ 436 (618)
T 1qsa_A 418 QLARYAFNNQWWDLSVQAT 436 (618)
T ss_dssp HHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHCCChHHHHHHH
Confidence 6667777777777766544
No 262
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=91.38 E-value=1.1 Score=25.19 Aligned_cols=40 Identities=10% Similarity=0.177 Sum_probs=30.6
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHh
Q psy17412 197 LYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQA 236 (240)
Q Consensus 197 ~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~ 236 (240)
..+|..+...|++++|..+|-+++...|.-.+....+.+.
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~q~t 60 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQT 60 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHHhh
Confidence 5678888888888888888888888888776666555543
No 263
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=90.34 E-value=0.00078 Score=52.83 Aligned_cols=138 Identities=16% Similarity=0.173 Sum_probs=88.7
Q ss_pred HHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCC
Q psy17412 50 KANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQ 129 (240)
Q Consensus 50 ~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~ 129 (240)
...|.-++..|.|+.|.-+|.. ..-|..++.++..+|+|..|.+..+++ +++..|......+...+.
T Consensus 148 q~VGDrcf~e~lYeAAKilys~--------isN~akLAstLV~L~~yq~AVdaArKA-----ns~ktWKeV~~ACvd~~E 214 (624)
T 3lvg_A 148 QQVGDRCYDEKMYDAAKLLYNN--------VSNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVDGKE 214 (624)
T ss_dssp HHHHHHHHHSCCSTTSSTTGGG--------SCCCTTTSSSSSSCSGGGSSTTTTTTC-----CSSCSHHHHTHHHHHSCT
T ss_pred HHHHHHHHHccCHHHHHHHHHh--------CccHHHHHHHHHHHHHHHHHHHHHHhc-----CChhHHHHHHHHHhCchH
Confidence 3355555555555555444422 223445667777777777777766665 445567777777777777
Q ss_pred HHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCH
Q psy17412 130 REEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQR 209 (240)
Q Consensus 130 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~ 209 (240)
+.-|--+--..+-.... +-.+...|...|.+++-+..++.++.+...+......+|.+|.+- ++
T Consensus 215 frLAqicGLniIvhade---------------L~elv~~YE~~G~f~ELIsLlEaglglErAHmGmFTELaILYsKY-~P 278 (624)
T 3lvg_A 215 FRLAQMCGLHIVVHADE---------------LEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKF-KP 278 (624)
T ss_dssp TTTTTHHHHHHHCCSSC---------------CSGGGSSSSTTCCCTTSTTTHHHHTTSTTCCHHHHHHHHHHHHSS-CT
T ss_pred HHHHHHhcchhcccHHH---------------HHHHHHHHHhCCCHHHHHHHHHHHhCCCchhHHHHHHHHHHHHhc-CH
Confidence 77766665554433222 444455677788999999999999988888888888888777653 34
Q ss_pred HHHHHHH
Q psy17412 210 EEAKEYI 216 (240)
Q Consensus 210 ~~A~~~~ 216 (240)
++-.+++
T Consensus 279 eKlmEHl 285 (624)
T 3lvg_A 279 QKMREHL 285 (624)
T ss_dssp THHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 264
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=90.08 E-value=5 Score=34.99 Aligned_cols=91 Identities=15% Similarity=0.013 Sum_probs=66.6
Q ss_pred hHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhc-Cc-------------------
Q psy17412 52 NGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRL-DE------------------- 111 (240)
Q Consensus 52 ~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~-~~------------------- 111 (240)
+...+...|.++-+.+ .+..-|.++..-+.+|.++...|++++|..+|+++-.- ..
T Consensus 816 l~~~L~~~~~~~~a~e----L~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e 891 (950)
T 4gq2_M 816 LVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYH 891 (950)
T ss_dssp HHHHHHHTTCHHHHHH----HGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTT
T ss_pred HHHHHHHhcHHHHHHH----HHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCccc
Confidence 4455666777765433 44666777777789999999999999999999987521 00
Q ss_pred ---ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q psy17412 112 ---DNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPT 146 (240)
Q Consensus 112 ---~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~ 146 (240)
.....|.....++...+-++-++...+.|+.....
T Consensus 892 ~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~ 929 (950)
T 4gq2_M 892 HQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKET 929 (950)
T ss_dssp TCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCS
T ss_pred ccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhccc
Confidence 01235677788888999999999999999986543
No 265
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=88.95 E-value=4.4 Score=31.92 Aligned_cols=99 Identities=9% Similarity=-0.080 Sum_probs=66.6
Q ss_pred CCHHHHHHHHHHHHHcCCCchHHHHHhc-----cCchHHHHHHHHHHHHhcccCchhhHHHHHhhc--------Ch--hh
Q psy17412 128 GQREEAKEYVRQLVEKYPTRRKLAIEQV-----RDSPVLYTNRALTLLHLQLYDPVLPDCDKALRL--------DE--DN 192 (240)
Q Consensus 128 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~-----~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~--------~~--~~ 192 (240)
...+++...+.++....-++........ .....+...+-.+|++.++..-|...++..-.. .| ..
T Consensus 140 ~~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~ 219 (455)
T 3t5v_B 140 QFLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQ 219 (455)
T ss_dssp HHHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHH
T ss_pred hHHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccce
Confidence 3567777888888876443322101000 011223455668899999999998888654322 22 23
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCc
Q psy17412 193 MKAHLYKARAMHNLGQREEAKEYIRELVEK-YPTR 226 (240)
Q Consensus 193 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~-~p~~ 226 (240)
+...+.+|+++...+++.+|.+++..|++. .|.+
T Consensus 220 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 220 IEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred EeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 667899999999999999999999999998 6654
No 266
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=86.82 E-value=2.6 Score=23.64 Aligned_cols=33 Identities=21% Similarity=0.321 Sum_probs=27.6
Q ss_pred HHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHH
Q psy17412 50 KANGNKAFQSGQYEAALVQYDKAIEQVRDSPVL 82 (240)
Q Consensus 50 ~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 82 (240)
..+|..+...|++++|...|-+|+...|.-...
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~L 53 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQL 53 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHH
Confidence 457888899999999999999999998876544
No 267
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=86.65 E-value=5.1 Score=34.91 Aligned_cols=52 Identities=12% Similarity=0.030 Sum_probs=39.1
Q ss_pred HHHHHHHccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy17412 86 RALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLV 141 (240)
Q Consensus 86 la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~ 141 (240)
+.......|.++-| ...+...|.++-.-+.+|.++...|++++|..+|+++-
T Consensus 816 l~~~L~~~~~~~~a----~eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 816 LVEKLFLFKQYNAC----MQLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 867 (950)
T ss_dssp HHHHHHHTTCHHHH----HHHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHhcHHHHH----HHHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 44455556655533 34556667777778999999999999999999999875
No 268
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=86.32 E-value=1.9 Score=25.60 Aligned_cols=37 Identities=8% Similarity=0.161 Sum_probs=20.6
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy17412 197 LYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENY 233 (240)
Q Consensus 197 ~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l 233 (240)
..+|..+...|+++.|+.+|-+++...|.-.+....+
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~LL~i~ 60 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVL 60 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 3455555666666666666666666655544444333
No 269
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=85.12 E-value=3.7 Score=28.34 Aligned_cols=56 Identities=14% Similarity=0.019 Sum_probs=42.3
Q ss_pred hhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChH-----HHHHHHHHHHHccCcCc
Q psy17412 43 QDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPV-----LYTNRALTLLHLQLYDP 98 (240)
Q Consensus 43 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~-----~~~~la~~~~~~~~~~~ 98 (240)
.+.....+.+|..++..++|.+|.+.+..|+...|.... ++..+.-+.+-+|+...
T Consensus 11 ~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP~ 71 (203)
T 3t5x_A 11 AQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPT 71 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 346778899999999999999999999999999886643 23334444456777644
No 270
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=84.19 E-value=3.1 Score=32.79 Aligned_cols=88 Identities=5% Similarity=-0.067 Sum_probs=63.4
Q ss_pred CCHHHHHHHHHHHHHhcC-----C--Ch---------HHHHHHHHHHHHccCcCchHHHHHHHHhcC--------c--cc
Q psy17412 60 GQYEAALVQYDKAIEQVR-----D--SP---------VLYTNRALTLLHLQLYDPVLPDCDKALRLD--------E--DN 113 (240)
Q Consensus 60 ~~~~~A~~~~~~a~~~~~-----~--~~---------~~~~~la~~~~~~~~~~~A~~~~~~~~~~~--------~--~~ 113 (240)
...+++...+.++....- + .. .....+-.+|++.|+...+...++..-... | ..
T Consensus 140 ~~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~ 219 (455)
T 3t5v_B 140 QFLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQ 219 (455)
T ss_dssp HHHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHH
T ss_pred hHHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccce
Confidence 346777788888877621 1 10 123345578999999999988886543222 2 23
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-CCCc
Q psy17412 114 MKAHLYKARAMHSLGQREEAKEYVRQLVEK-YPTR 147 (240)
Q Consensus 114 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~-~~~~ 147 (240)
....|.+|..+...++|.+|..++..|++. .|..
T Consensus 220 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 220 IEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred EeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 457889999999999999999999999998 7754
No 271
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=83.25 E-value=3.1 Score=24.01 Aligned_cols=31 Identities=35% Similarity=0.442 Sum_probs=21.4
Q ss_pred HHHHHHHhHhHHHHhCCHHHHHHHHHHHHHh
Q psy17412 45 IADHFKANGNKAFQSGQYEAALVQYDKAIEQ 75 (240)
Q Consensus 45 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 75 (240)
.+..+...|...-..|+|++|+.+|..+++.
T Consensus 10 ~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 10 MARKYAILAVKADKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 3444556666677778888888887777654
No 272
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=82.51 E-value=8.4 Score=25.46 Aligned_cols=60 Identities=10% Similarity=0.142 Sum_probs=37.3
Q ss_pred HHHhHhHHHHhCCHHHHHHHHHHHHHhcCCC--------hHHH-HHHHHHHHHccCcCchHHHHHHHHh
Q psy17412 49 FKANGNKAFQSGQYEAALVQYDKAIEQVRDS--------PVLY-TNRALTLLHLQLYDPVLPDCDKALR 108 (240)
Q Consensus 49 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~--------~~~~-~~la~~~~~~~~~~~A~~~~~~~~~ 108 (240)
-+..|..++..|+|=+|-+.++.+-...+.. ..+. ...|..+.+.|+...|...+.+++.
T Consensus 35 ~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 35 AVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3556677777788888888888877665433 1122 2333445556666667666666654
No 273
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=82.17 E-value=4 Score=23.97 Aligned_cols=30 Identities=23% Similarity=0.338 Sum_probs=23.0
Q ss_pred HHHHHHhHhHHHHhCCHHHHHHHHHHHHHh
Q psy17412 46 ADHFKANGNKAFQSGQYEAALVQYDKAIEQ 75 (240)
Q Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 75 (240)
+..+-..+..+...|+|++||++.+++...
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa~y 44 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKATTY 44 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 445556788888999999999888877543
No 274
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=80.58 E-value=4.1 Score=24.19 Aligned_cols=32 Identities=19% Similarity=0.289 Sum_probs=26.5
Q ss_pred HHhHhHHHHhCCHHHHHHHHHHHHHhcCCChH
Q psy17412 50 KANGNKAFQSGQYEAALVQYDKAIEQVRDSPV 81 (240)
Q Consensus 50 ~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 81 (240)
..+|..+...|+++.|+.+|-+|+...|.-..
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~ 55 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQ 55 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSCHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHH
Confidence 45788888999999999999999998877543
No 275
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=80.57 E-value=6.3 Score=27.19 Aligned_cols=53 Identities=8% Similarity=-0.101 Sum_probs=38.0
Q ss_pred hHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhH-----HHHHHHHHHHHHcCCHHH
Q psy17412 159 PVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNM-----KAHLYKARAMHNLGQREE 211 (240)
Q Consensus 159 ~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~-----~~~~~la~~~~~~g~~~~ 211 (240)
....+.+|.+++..++|.+|.+.+..|++..|... .++..+.-+-+-+|+...
T Consensus 14 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP~ 71 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPT 71 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 56778889999989999999999999988877542 234444445566777543
No 276
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=80.40 E-value=4.6 Score=23.48 Aligned_cols=30 Identities=23% Similarity=0.288 Sum_probs=21.7
Q ss_pred HHHHHHhHhHHHHhCCHHHHHHHHHHHHHh
Q psy17412 46 ADHFKANGNKAFQSGQYEAALVQYDKAIEQ 75 (240)
Q Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 75 (240)
+..+...|...-..|+|++|+.+|..+++.
T Consensus 16 A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 16 AATVLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 444556666777788888888888887764
No 277
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=79.65 E-value=13 Score=25.66 Aligned_cols=79 Identities=6% Similarity=-0.099 Sum_probs=56.4
Q ss_pred HHHHHHHHhcCCC---------hHHHHHHHHHHHHccCcCchHHHHHHHHhc--CcccHHHHHHHHHHHHHcCCHHHHHH
Q psy17412 67 VQYDKAIEQVRDS---------PVLYTNRALTLLHLQLYDPVLPDCDKALRL--DEDNMKAHLYKARAMHSLGQREEAKE 135 (240)
Q Consensus 67 ~~~~~a~~~~~~~---------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~la~~~~~~~~~~~A~~ 135 (240)
.++++++....++ ..+|...+..+ ..++..++...|...... ....+..|...|..+...|++.+|..
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~ 136 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKV 136 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 5778887754332 34555555543 123345777888777643 45678888999999999999999999
Q ss_pred HHHHHHHcCCC
Q psy17412 136 YVRQLVEKYPT 146 (240)
Q Consensus 136 ~~~~a~~~~~~ 146 (240)
.|+.+++....
T Consensus 137 Vy~~GI~~~A~ 147 (202)
T 3esl_A 137 LLELGAENNCR 147 (202)
T ss_dssp HHHHHHHTTCB
T ss_pred HHHHHHHcCCc
Confidence 99999997654
No 278
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=78.53 E-value=6.1 Score=23.21 Aligned_cols=28 Identities=21% Similarity=0.200 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy17412 193 MKAHLYKARAMHNLGQREEAKEYIRELV 220 (240)
Q Consensus 193 ~~~~~~la~~~~~~g~~~~A~~~~~~~~ 220 (240)
+..+..++..+...|+|++|+++.+++.
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 3445566777777777777766555443
No 279
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=78.23 E-value=9.3 Score=31.79 Aligned_cols=56 Identities=13% Similarity=0.118 Sum_probs=48.7
Q ss_pred hhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCc
Q psy17412 43 QDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDP 98 (240)
Q Consensus 43 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~ 98 (240)
..-.+.....|...+..|+|.-|.+..+.++..+|++..+...++.+|.++|.-.+
T Consensus 446 ~gg~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~~ 501 (658)
T 2cfu_A 446 MGGAERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQAE 501 (658)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCS
T ss_pred hcCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 34466778889999999999999999999999999999999999999998886554
No 280
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=78.22 E-value=5.6 Score=22.95 Aligned_cols=30 Identities=17% Similarity=0.190 Sum_probs=19.7
Q ss_pred HHHHHHhHhHHHHhCCHHHHHHHHHHHHHh
Q psy17412 46 ADHFKANGNKAFQSGQYEAALVQYDKAIEQ 75 (240)
Q Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 75 (240)
+..+...|...-..|+|++|+.+|..+++.
T Consensus 13 A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 13 GIELVQKAIDLDTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 334455555666677888887777777654
No 281
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=77.24 E-value=8.5 Score=22.38 Aligned_cols=33 Identities=30% Similarity=0.509 Sum_probs=28.3
Q ss_pred hHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhc
Q psy17412 44 DIADHFKANGNKAFQSGQYEAALVQYDKAIEQV 76 (240)
Q Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~ 76 (240)
..++.+...|..+++.++|.+|..+|+++....
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~t 83 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNLS 83 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHccc
Confidence 567888888999999999999999999987654
No 282
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=77.21 E-value=8.2 Score=22.21 Aligned_cols=31 Identities=39% Similarity=0.523 Sum_probs=23.3
Q ss_pred HHHHHHHhHhHHHHhCCHHHHHHHHHHHHHh
Q psy17412 45 IADHFKANGNKAFQSGQYEAALVQYDKAIEQ 75 (240)
Q Consensus 45 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 75 (240)
.+..+...|...-..|+|++|+.+|..+++.
T Consensus 18 ~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 18 MARKYAINAVKADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 4445666777778888988888888888764
No 283
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=77.18 E-value=6.1 Score=23.32 Aligned_cols=28 Identities=21% Similarity=0.306 Sum_probs=17.2
Q ss_pred HHHHhHhHHHHhCCHHHHHHHHHHHHHh
Q psy17412 48 HFKANGNKAFQSGQYEAALVQYDKAIEQ 75 (240)
Q Consensus 48 ~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 75 (240)
.+...|...-..|+|++|+.+|..+++.
T Consensus 17 ~lv~~Ave~D~~g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 17 AVLKRAVELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 3444555556667777777776666553
No 284
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=76.70 E-value=2.6 Score=24.01 Aligned_cols=26 Identities=19% Similarity=0.111 Sum_probs=13.9
Q ss_pred HHHHHHHHHHhcccCchhhHHHHHhh
Q psy17412 162 YTNRALTLLHLQLYDPVLPDCDKALR 187 (240)
Q Consensus 162 ~~~la~~~~~~~~~~~A~~~~~~~l~ 187 (240)
...+|+-+...|+|+.|+.+|+.+++
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 34455555555555555555555543
No 285
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=74.95 E-value=11 Score=22.35 Aligned_cols=56 Identities=16% Similarity=0.055 Sum_probs=32.0
Q ss_pred HhHhHHHHhCCHHHHHHHHHHHHHhcCCC------hHHHHHHHHHHHHccCcCchHHHHHHHHh
Q psy17412 51 ANGNKAFQSGQYEAALVQYDKAIEQVRDS------PVLYTNRALTLLHLQLYDPVLPDCDKALR 108 (240)
Q Consensus 51 ~~a~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 108 (240)
..|..++..|+|=+|-+.++..-...|+. ..+....|..+...|+. |...+.+++.
T Consensus 6 ~~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 6 EEVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 34566667777777777777776665432 11223333444455555 6666666653
No 286
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=74.79 E-value=24 Score=26.26 Aligned_cols=27 Identities=15% Similarity=0.007 Sum_probs=24.2
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHH
Q psy17412 191 DNMKAHLYKARAMHNLGQREEAKEYIR 217 (240)
Q Consensus 191 ~~~~~~~~la~~~~~~g~~~~A~~~~~ 217 (240)
.++..+..+|..++..|++.+|..+|-
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 478899999999999999999999884
No 287
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=74.46 E-value=7.2 Score=24.18 Aligned_cols=27 Identities=26% Similarity=0.496 Sum_probs=16.4
Q ss_pred HHHhHhHHHHhCCHHHHHHHHHHHHHh
Q psy17412 49 FKANGNKAFQSGQYEAALVQYDKAIEQ 75 (240)
Q Consensus 49 ~~~~a~~~~~~~~~~~A~~~~~~a~~~ 75 (240)
+...|...-..|+|++|+.+|..+++.
T Consensus 21 lv~~Ave~D~ag~y~eAl~lY~~Aie~ 47 (117)
T 2cpt_A 21 LASKAAQEDKAGNYEEALQLYQHAVQY 47 (117)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 444455555667777777777666553
No 288
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=73.90 E-value=3.9 Score=23.29 Aligned_cols=27 Identities=22% Similarity=0.338 Sum_probs=21.8
Q ss_pred HHHhHhHHHHhCCHHHHHHHHHHHHHh
Q psy17412 49 FKANGNKAFQSGQYEAALVQYDKAIEQ 75 (240)
Q Consensus 49 ~~~~a~~~~~~~~~~~A~~~~~~a~~~ 75 (240)
...+|.-+...|+|+.|+.+|+.+++.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 455778888889999999999888765
No 289
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=72.59 E-value=27 Score=26.03 Aligned_cols=175 Identities=13% Similarity=0.074 Sum_probs=88.6
Q ss_pred hHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHH-HH----------------HHHHhcCc--c
Q psy17412 52 NGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLP-DC----------------DKALRLDE--D 112 (240)
Q Consensus 52 ~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~-~~----------------~~~~~~~~--~ 112 (240)
++..+...|.|+.|.+++.+-+..-.- ....-..-.+|....-+-.+.. .+ .+.+=.-| .
T Consensus 34 laadhvAAGsFetAm~lLnrQvGivnf-~PLk~~F~~~y~~s~~~l~~~~~~lp~l~~~~~r~~~e~~~~~~lP~i~~l~ 112 (325)
T 3mv2_A 34 LPAVLVAAGAFDAAVQALSKQVGVVKL-EPLKKYFTNIYEGCRTYIPSTPCELPAQLGYVRAYDDTVSEDQILPYVPGLD 112 (325)
T ss_dssp SHHHHHHTTCHHHHHHHHHHHHCBCCC-GGGHHHHHHHHHHTEEEECCSSTTSCCEEEECBSSCSSSCGGGCCBCCCCHH
T ss_pred cHHHHHHccCHHHHHHHHHHHhCccCc-hhhHHHHHHHHHHHhhhcccCCCCCCcchhhhcCCccccccccCCCCCCCHH
Confidence 567788999999999999997765311 1122222334443322222211 00 00000011 1
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC----CchHHHHHhccCchHH--HHHHHHHH-HHhcccC--chhhHHH
Q psy17412 113 NMKAHLYKARAMHSLGQREEAKEYVRQLVEKYP----TRRKLAIEQVRDSPVL--YTNRALTL-LHLQLYD--PVLPDCD 183 (240)
Q Consensus 113 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~----~~~~~~~~~~~~~~~~--~~~la~~~-~~~~~~~--~A~~~~~ 183 (240)
........|.-+...|++++|+..|+.++..-| ++... .....+...+ .+.+|... ....... .....++
T Consensus 113 ~L~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e-~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lE 191 (325)
T 3mv2_A 113 VVNEKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAED-EKLAHKILETAREYILGLSIELERRSLKEGNTVRMLE 191 (325)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHH-HHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHH
Confidence 122345667788999999999999999987533 11111 0000000000 22222211 1112211 1111111
Q ss_pred HH-----hhcChhhHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH
Q psy17412 184 KA-----LRLDEDNMK-AHLYKARAMHNLGQREEAKEYIRELVEKYPTRRK 228 (240)
Q Consensus 184 ~~-----l~~~~~~~~-~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~ 228 (240)
-+ .++.|.+.. ++..--...++.++|..|..+.++.+++.|..+.
T Consensus 192 LAAYFT~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~ 242 (325)
T 3mv2_A 192 LAAYFTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPR 242 (325)
T ss_dssp HHHHGGGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSHH
T ss_pred HHHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHH
Confidence 11 123444332 3333334578999999999999999999986543
No 290
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=71.35 E-value=22 Score=24.46 Aligned_cols=70 Identities=7% Similarity=-0.027 Sum_probs=53.3
Q ss_pred hchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCc
Q psy17412 41 ARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQV--RDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDE 111 (240)
Q Consensus 41 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 111 (240)
.++.-...|...+..+ ..++..++.++|.-..... ...+..|...|..+...|++.+|.+.|+.+++...
T Consensus 75 ND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A 146 (202)
T 3esl_A 75 NDPRFLKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNC 146 (202)
T ss_dssp TCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 3555566666666554 2445778888888877754 45577888899999999999999999999998763
No 291
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=68.97 E-value=21 Score=23.15 Aligned_cols=53 Identities=15% Similarity=0.099 Sum_probs=37.9
Q ss_pred ccCcCchHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Q psy17412 93 LQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYP 145 (240)
Q Consensus 93 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~ 145 (240)
.|+-++-.+.+...+.-.+-++.....+|.+|.+.|+..+|.+.+.+|-+..-
T Consensus 104 ~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG~ 156 (172)
T 1wy6_A 104 QGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKKGE 156 (172)
T ss_dssp TTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred hccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhhh
Confidence 34444433444443444556689999999999999999999999999987654
No 292
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=67.89 E-value=11 Score=26.23 Aligned_cols=42 Identities=7% Similarity=0.002 Sum_probs=24.6
Q ss_pred HHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCC
Q psy17412 167 LTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQ 208 (240)
Q Consensus 167 ~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~ 208 (240)
.++++.|.|++|.+.+++.+..++.+......|..+-.+...
T Consensus 122 ~VCiek~~f~kA~eiLkr~~~~~~s~~kLr~kL~~II~~Kd~ 163 (235)
T 3bu8_A 122 IICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLNIIREKNL 163 (235)
T ss_dssp HHHHHTTCHHHHHHHHHHHSTTCGGGHHHHHHHHHHHHHTCT
T ss_pred HHHHHhcchHHHHHHHHHHhcCCCCchHHHHHHHHHHhccCc
Confidence 345566777777777777766666555555555544443333
No 293
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=67.48 E-value=8.5 Score=26.34 Aligned_cols=33 Identities=12% Similarity=0.113 Sum_probs=13.4
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q psy17412 202 AMHNLGQREEAKEYIRELVEKYPTRRKLVENYT 234 (240)
Q Consensus 202 ~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~ 234 (240)
++++.|.+++|.+.+++....++++......|.
T Consensus 126 VCiekg~Fk~A~eiLkr~f~~~~~~~~lr~kL~ 158 (211)
T 3bqo_A 126 VCMENGNFKEAEEVFERIFGDPNSHMPFKSKLL 158 (211)
T ss_dssp HHHHTTCHHHHHHHHHHHC-----CCTTHHHHH
T ss_pred HHHHccchHHHHHHHHHHhcCCCCchHHHHHHH
Confidence 344555555555555555544444443333333
No 294
>1g1e_B SIN3A; four-helix bundle, protein-peptide complex, transcription; NMR {Mus musculus} SCOP: a.59.1.1 PDB: 1s5q_B 1s5r_B 2l9s_B
Probab=66.73 E-value=17 Score=21.25 Aligned_cols=63 Identities=8% Similarity=0.147 Sum_probs=39.4
Q ss_pred cCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHH--------------HHHHHHHHHHhCCCcHHHHHHHHHhh
Q psy17412 175 YDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREE--------------AKEYIRELVEKYPTRRKLVENYTQAF 237 (240)
Q Consensus 175 ~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~--------------A~~~~~~~~~~~p~~~~~~~~l~~~~ 237 (240)
++.|+.+++++-....+++..|...-.++..-..... .-+.+.++..+..+++++...+...+
T Consensus 10 ~~~A~~YvnkVK~rF~~~p~~Y~~FL~IL~~y~~~~~~~~~~~~~~~~~~~~~~V~~~V~~LF~~h~DLl~~F~~FL 86 (89)
T 1g1e_B 10 FNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFL 86 (89)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCSCCHHHHHHHHHHHTTTCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHhccCccccccccccccccHHHHHHHHHHHHccCHHHHHHHHHHC
Confidence 4567777777766555556666555444433222111 23788888888889999888776544
No 295
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=64.91 E-value=14 Score=21.19 Aligned_cols=26 Identities=23% Similarity=0.194 Sum_probs=17.3
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17412 117 HLYKARAMHSLGQREEAKEYVRQLVE 142 (240)
Q Consensus 117 ~~~la~~~~~~~~~~~A~~~~~~a~~ 142 (240)
+...|.-.-..|++++|+.+|..+++
T Consensus 22 lv~~Ave~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 22 YAINAVKADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 34445555667788888777777765
No 296
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=63.88 E-value=21 Score=29.72 Aligned_cols=45 Identities=31% Similarity=0.235 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhhhc
Q psy17412 195 AHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFEQ 239 (240)
Q Consensus 195 ~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 239 (240)
.....|+..+..|+|.-|.+....++..+|++.+++...+.++++
T Consensus 451 ~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~ 495 (658)
T 2cfu_A 451 RLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQ 495 (658)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 445566667777777777777777777777777777777776654
No 297
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=62.18 E-value=15 Score=21.11 Aligned_cols=24 Identities=25% Similarity=0.324 Sum_probs=14.8
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHH
Q psy17412 119 YKARAMHSLGQREEAKEYVRQLVE 142 (240)
Q Consensus 119 ~la~~~~~~~~~~~A~~~~~~a~~ 142 (240)
..|.-.-..|++++|+.+|..+++
T Consensus 16 ~~Ave~D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 16 ILAVKADKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHH
Confidence 334444566777777777766655
No 298
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=61.08 E-value=33 Score=22.66 Aligned_cols=61 Identities=7% Similarity=-0.011 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhcccCchhhHHHHHhhcChhh---HHHH---HH---HHHHHHHcCCHHHHHHHHHHHHHh
Q psy17412 162 YTNRALTLLHLQLYDPVLPDCDKALRLDEDN---MKAH---LY---KARAMHNLGQREEAKEYIRELVEK 222 (240)
Q Consensus 162 ~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~---~~~~---~~---la~~~~~~g~~~~A~~~~~~~~~~ 222 (240)
-+.-+..++..|+|=+|-+.++.+....+.. ...+ .. .|......|+...|...+.+++..
T Consensus 35 ~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 35 AVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 4556777888899999999999998775432 2222 23 333456789999999999999863
No 299
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=61.07 E-value=49 Score=24.71 Aligned_cols=101 Identities=13% Similarity=0.093 Sum_probs=58.6
Q ss_pred HHHhHhHHHHhCCHHHHHHHHHHHHHhcCC----C----hHH--------HHHHHHHH-HHccCc--CchHHHHHHH---
Q psy17412 49 FKANGNKAFQSGQYEAALVQYDKAIEQVRD----S----PVL--------YTNRALTL-LHLQLY--DPVLPDCDKA--- 106 (240)
Q Consensus 49 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~----~----~~~--------~~~la~~~-~~~~~~--~~A~~~~~~~--- 106 (240)
....|..++..|++++|+..|+.++..-|- + .++ .|.+|... ...... +.....++-+
T Consensus 117 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELAAYF 196 (325)
T 3mv2_A 117 KMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELAAYF 196 (325)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHHG
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHh
Confidence 455788999999999999999999886431 1 111 12222211 111111 1111111111
Q ss_pred --HhcCcccHHHHHHHH-HHHHHcCCHHHHHHHHHHHHHcCCCchH
Q psy17412 107 --LRLDEDNMKAHLYKA-RAMHSLGQREEAKEYVRQLVEKYPTRRK 149 (240)
Q Consensus 107 --~~~~~~~~~~~~~la-~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 149 (240)
.++.|.+-..-...| ...++.++|..|....++.+++.|....
T Consensus 197 T~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~ 242 (325)
T 3mv2_A 197 TKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPR 242 (325)
T ss_dssp GGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSHH
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHH
Confidence 123344333223333 4678899999999999999999986443
No 300
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=60.81 E-value=49 Score=24.65 Aligned_cols=100 Identities=16% Similarity=0.122 Sum_probs=59.6
Q ss_pred HHHhHhHHHHhCCHHHHHHHHHHHHHhcCC----C----hHH--------HHHHHHHH-HHccCcCc-hHHHHHHHH---
Q psy17412 49 FKANGNKAFQSGQYEAALVQYDKAIEQVRD----S----PVL--------YTNRALTL-LHLQLYDP-VLPDCDKAL--- 107 (240)
Q Consensus 49 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~----~----~~~--------~~~la~~~-~~~~~~~~-A~~~~~~~~--- 107 (240)
....|..++..|++++|+..|+.++..-|- + .++ .+.+|... ....+... ..+...+.+
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lELA 184 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMA 184 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHH
Confidence 456789999999999999999999987542 1 111 12222211 11122111 012222322
Q ss_pred ------hcCcccHHHHHHHH-HHHHHcCCHHHHHHHHHHHHHcCCCch
Q psy17412 108 ------RLDEDNMKAHLYKA-RAMHSLGQREEAKEYVRQLVEKYPTRR 148 (240)
Q Consensus 108 ------~~~~~~~~~~~~la-~~~~~~~~~~~A~~~~~~a~~~~~~~~ 148 (240)
++.|.+-..-...| ...++.++|..|....++.+++.|...
T Consensus 185 AYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~ 232 (320)
T 3mkr_B 185 AYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKPE 232 (320)
T ss_dssp HHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCCHH
T ss_pred HHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHH
Confidence 23344433223333 467889999999999999999988633
No 301
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=60.59 E-value=45 Score=25.45 Aligned_cols=45 Identities=9% Similarity=-0.106 Sum_probs=30.6
Q ss_pred hHHHHHHHHhcC-----cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Q psy17412 99 VLPDCDKALRLD-----EDNMKAHLYKARAMHSLGQREEAKEYVRQLVEK 143 (240)
Q Consensus 99 A~~~~~~~~~~~-----~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 143 (240)
++..|.+++... ..+.-.|..+|-.+++.+++.+|+..+-.+-..
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~V 325 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGYV 325 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHHH
Confidence 666666666432 223445677788888888888888888777543
No 302
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.36 E-value=29 Score=21.44 Aligned_cols=26 Identities=31% Similarity=0.328 Sum_probs=11.3
Q ss_pred HHHHhHhHHHHhCCHHHHHHHHHHHH
Q psy17412 48 HFKANGNKAFQSGQYEAALVQYDKAI 73 (240)
Q Consensus 48 ~~~~~a~~~~~~~~~~~A~~~~~~a~ 73 (240)
.+...|...-..|+-+.|+++|++.+
T Consensus 24 ~~Is~AL~~DE~g~k~~Al~lYk~GI 49 (116)
T 2dl1_A 24 LFVNKGLNTDELGQKEEAKNYYKQGI 49 (116)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHhhhhhcCCHHHHHHHHHHHH
Confidence 33334444444444444444444443
No 303
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=58.70 E-value=42 Score=25.60 Aligned_cols=61 Identities=10% Similarity=-0.135 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHh--cccCchhhHHHHHhhcCh-----hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17412 161 LYTNRALTLLHL--QLYDPVLPDCDKALRLDE-----DNMKAHLYKARAMHNLGQREEAKEYIRELVE 221 (240)
Q Consensus 161 ~~~~la~~~~~~--~~~~~A~~~~~~~l~~~~-----~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~ 221 (240)
.+.++|.+-... .....++..|.+++.... .+...+..+|-.+++.+++.+|+..+..+-.
T Consensus 257 ALgnLgDLEe~~pt~gr~~~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~ 324 (472)
T 3re2_A 257 AIANLGDLEEISPTPGRPPAEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGY 324 (472)
T ss_dssp HHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhcchhhHHhcCCCCCCCCHHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHH
Confidence 344555443322 122347777777775432 2466788889999999999999999987654
No 304
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=57.40 E-value=1e+02 Score=27.13 Aligned_cols=161 Identities=17% Similarity=0.074 Sum_probs=78.0
Q ss_pred HHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHhcCcccHH--HHHHHHHHH
Q psy17412 47 DHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMK--AHLYKARAM 124 (240)
Q Consensus 47 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~--~~~~la~~~ 124 (240)
.+-+.+|.++.-.|+-+....++..+.+...+...-...+|......|+.+.+....+..........+ +-+.+|..|
T Consensus 491 ~AalALGli~vGTgn~~ai~~LL~~~~e~~~e~vrR~aalgLGll~~g~~e~~~~li~~L~~~~dp~vRygaa~alglAy 570 (963)
T 4ady_A 491 AAALGMGLCMLGTGKPEAIHDMFTYSQETQHGNITRGLAVGLALINYGRQELADDLITKMLASDESLLRYGGAFTIALAY 570 (963)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCGGGGHHHHHHHHHCSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHhhhhcccCCHHHHHHHHHHHhccCcHHHHHHHHHHHHhhhCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHHHh
Confidence 344566777777777766666666655433222222234444455667777666665555443221111 234466677
Q ss_pred HHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHH
Q psy17412 125 HSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMH 204 (240)
Q Consensus 125 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~ 204 (240)
...|+...-...+..+..-..++... ..-+|......|+.+.+...+....+. .++.+.+..+.++-
T Consensus 571 aGTGn~~aIq~LL~~~~~d~~d~VRr-----------aAViaLGlI~~g~~e~v~rlv~~L~~~--~d~~VR~gAalALG 637 (963)
T 4ady_A 571 AGTGNNSAVKRLLHVAVSDSNDDVRR-----------AAVIALGFVLLRDYTTVPRIVQLLSKS--HNAHVRCGTAFALG 637 (963)
T ss_dssp TTSCCHHHHHHHHHHHHHCSCHHHHH-----------HHHHHHHHHTSSSCSSHHHHTTTGGGC--SCHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHhccCCcHHHHH-----------HHHHHHHhhccCCHHHHHHHHHHHHhc--CCHHHHHHHHHHHH
Confidence 77888544444555555432222111 222333333445555444444333322 23444444333332
Q ss_pred H--cCCH-HHHHHHHHHHH
Q psy17412 205 N--LGQR-EEAKEYIRELV 220 (240)
Q Consensus 205 ~--~g~~-~~A~~~~~~~~ 220 (240)
. .|+. .+++..+....
T Consensus 638 li~aGn~~~~aid~L~~L~ 656 (963)
T 4ady_A 638 IACAGKGLQSAIDVLDPLT 656 (963)
T ss_dssp HHTSSSCCHHHHHHHHHHH
T ss_pred HhccCCCcHHHHHHHHHHc
Confidence 2 2332 56777776654
No 305
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=56.73 E-value=16 Score=25.45 Aligned_cols=42 Identities=12% Similarity=0.078 Sum_probs=24.6
Q ss_pred HHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCc
Q psy17412 55 KAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLY 96 (240)
Q Consensus 55 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~ 96 (240)
++++.|.|++|.+.+++.+..++.+......+..+-...+.+
T Consensus 123 VCiek~~f~kA~eiLkr~~~~~~s~~kLr~kL~~II~~Kd~~ 164 (235)
T 3bu8_A 123 ICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLNIIREKNLA 164 (235)
T ss_dssp HHHHTTCHHHHHHHHHHHSTTCGGGHHHHHHHHHHHHHTCTT
T ss_pred HHHHhcchHHHHHHHHHHhcCCCCchHHHHHHHHHHhccCcc
Confidence 345667777777777777666555555555555554444333
No 306
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=55.62 E-value=31 Score=20.89 Aligned_cols=38 Identities=21% Similarity=-0.026 Sum_probs=30.2
Q ss_pred HHHhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHh
Q psy17412 38 ERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQ 75 (240)
Q Consensus 38 ~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 75 (240)
.......+++.....|....+.|+|++|.+.++++-+.
T Consensus 12 ~iI~~aG~ArS~~~eAl~~Ak~g~fe~A~~~l~eA~~~ 49 (105)
T 2e2a_A 12 EIVAYAGDARSKLLEALKAAENGDFAKADSLVVEAGSC 49 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 33445567788888888999999999999999888654
No 307
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=55.05 E-value=32 Score=20.73 Aligned_cols=37 Identities=16% Similarity=0.105 Sum_probs=29.5
Q ss_pred HHhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHh
Q psy17412 39 RKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQ 75 (240)
Q Consensus 39 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 75 (240)
......+++.....|....+.|+|++|.+.++++-+.
T Consensus 11 iI~~aG~Ars~~~eAl~~Ak~g~fe~A~~~l~eA~~~ 47 (103)
T 1wcr_A 11 LIINSGQARSLAYAALKQAKQGDFAAAKAMMDQSRMA 47 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 3345567778888888999999999999999887654
No 308
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=54.53 E-value=15 Score=25.12 Aligned_cols=45 Identities=4% Similarity=0.145 Sum_probs=25.9
Q ss_pred HhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcC
Q psy17412 53 GNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYD 97 (240)
Q Consensus 53 a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~ 97 (240)
-.++++.|.+++|.+.+++.+..++++......|..+-...+.+.
T Consensus 124 V~VCiekg~Fk~A~eiLkr~f~~~~~~~~lr~kL~~II~~Kd~~H 168 (211)
T 3bqo_A 124 IAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMIISQKDTFH 168 (211)
T ss_dssp HHHHHHTTCHHHHHHHHHHHC-----CCTTHHHHHHHHHTTCTTC
T ss_pred HHHHHHccchHHHHHHHHHHhcCCCCchHHHHHHHHHHHccCCCc
Confidence 345677888888888888887777666665555555544444333
No 309
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=54.20 E-value=42 Score=21.77 Aligned_cols=62 Identities=21% Similarity=0.179 Sum_probs=45.2
Q ss_pred HHHHHH-HHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q psy17412 162 YTNRAL-TLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKY 223 (240)
Q Consensus 162 ~~~la~-~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~ 223 (240)
+..+|. .....|+-++--+.+...+...+-++..+..+|.+|.+.|+..+|.+.+.++-+..
T Consensus 93 ~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 93 HVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKKG 155 (172)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 445554 44456666665556666555555568999999999999999999999999988764
No 310
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=53.84 E-value=54 Score=22.97 Aligned_cols=76 Identities=8% Similarity=-0.040 Sum_probs=54.7
Q ss_pred HHHHHHHHHHhcCCC---------hHHHHHHHHHHHHccCcCchHHHHHHHHhc--CcccHHHHHHHHHHHHHcCCHHHH
Q psy17412 65 ALVQYDKAIEQVRDS---------PVLYTNRALTLLHLQLYDPVLPDCDKALRL--DEDNMKAHLYKARAMHSLGQREEA 133 (240)
Q Consensus 65 A~~~~~~a~~~~~~~---------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~la~~~~~~~~~~~A 133 (240)
-..++++++....++ ..+|...+. ..+.+...|..+... .-..+..|...|..+...|++.+|
T Consensus 96 L~~lLErc~~~F~~~~rYknD~RyLklWl~Ya~------~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A 169 (223)
T 4aez_C 96 LVTLLERCTREFVRNPLYKDDVRYLRIWMQYVN------YIDEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKA 169 (223)
T ss_dssp HHHHHHHHHHHTTTCGGGTTCHHHHHHHHHHHT------TCSCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHhcccccccCCHHHHHHHHHHHH------ccCCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHH
Confidence 356777777764433 223333333 246778888877654 356778888999999999999999
Q ss_pred HHHHHHHHHcCCC
Q psy17412 134 KEYVRQLVEKYPT 146 (240)
Q Consensus 134 ~~~~~~a~~~~~~ 146 (240)
...|+.+++..-.
T Consensus 170 ~~Vy~~Gi~~~A~ 182 (223)
T 4aez_C 170 DEVYQKGKRMKAK 182 (223)
T ss_dssp HHHHHHHHHHTCB
T ss_pred HHHHHHHHHcCCc
Confidence 9999999987654
No 311
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=52.34 E-value=0.21 Score=39.63 Aligned_cols=23 Identities=9% Similarity=0.027 Sum_probs=17.4
Q ss_pred HHHHHHHHHHhcccCchhhHHHH
Q psy17412 162 YTNRALTLLHLQLYDPVLPDCDK 184 (240)
Q Consensus 162 ~~~la~~~~~~~~~~~A~~~~~~ 184 (240)
....|.-++..|.|+.|.-.|..
T Consensus 147 iq~VGDrcf~e~lYeAAKilys~ 169 (624)
T 3lvg_A 147 IQQVGDRCYDEKMYDAAKLLYNN 169 (624)
T ss_dssp THHHHHHHHHSCCSTTSSTTGGG
T ss_pred HHHHHHHHHHccCHHHHHHHHHh
Confidence 46778888888889888766654
No 312
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=52.32 E-value=1.2e+02 Score=26.62 Aligned_cols=162 Identities=14% Similarity=-0.013 Sum_probs=83.3
Q ss_pred HHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCC------Ch----HHHHHHHHHHHHccCcCchHHHHHHHHhcCcccH
Q psy17412 45 IADHFKANGNKAFQSGQYEAALVQYDKAIEQVRD------SP----VLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNM 114 (240)
Q Consensus 45 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~------~~----~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~ 114 (240)
..-+++.+|.++...+ ++++.++...+..... .. .+-..+|.++.-.++ +++.+.+...+..+....
T Consensus 412 k~GAllaLGli~ag~~--~~~~~lL~~~L~~~~~~~~~~~~~~ir~gAaLGLGla~~GS~~-eev~e~L~~~L~dd~~~~ 488 (963)
T 4ady_A 412 KGGSLYGLGLIYAGFG--RDTTDYLKNIIVENSGTSGDEDVDVLLHGASLGIGLAAMGSAN-IEVYEALKEVLYNDSATS 488 (963)
T ss_dssp HHHHHHHHHHHTTTTT--HHHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHSTTCCC-HHHHHHHHHHHHTCCHHH
T ss_pred HHHHHHHHHHhcCCCc--HHHHHHHHHHHcCccccccccccHHHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHhcCCHHH
Confidence 4556666666665554 3677877777765430 11 233355555554443 356677777665433222
Q ss_pred --HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhc-Chh
Q psy17412 115 --KAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRL-DED 191 (240)
Q Consensus 115 --~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~-~~~ 191 (240)
.+-+.+|.++.-.|+-+-....+..+.+-..+.... ...+|..+...|+.+.+-..++..... +|.
T Consensus 489 ~~~AalALGli~vGTgn~~ai~~LL~~~~e~~~e~vrR-----------~aalgLGll~~g~~e~~~~li~~L~~~~dp~ 557 (963)
T 4ady_A 489 GEAAALGMGLCMLGTGKPEAIHDMFTYSQETQHGNITR-----------GLAVGLALINYGRQELADDLITKMLASDESL 557 (963)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCSCHHHHH-----------HHHHHHHHHTTTCGGGGHHHHHHHHHCSCHH
T ss_pred HHHHHHHHhhhhcccCCHHHHHHHHHHHhccCcHHHHH-----------HHHHHHHhhhCCChHHHHHHHHHHHhCCCHH
Confidence 345567777777787665555555555432221111 233333344556655555444443332 121
Q ss_pred -hHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy17412 192 -NMKAHLYKARAMHNLGQREEAKEYIRELV 220 (240)
Q Consensus 192 -~~~~~~~la~~~~~~g~~~~A~~~~~~~~ 220 (240)
...+...+|..|...|+...-...+..+.
T Consensus 558 vRygaa~alglAyaGTGn~~aIq~LL~~~~ 587 (963)
T 4ady_A 558 LRYGGAFTIALAYAGTGNNSAVKRLLHVAV 587 (963)
T ss_dssp HHHHHHHHHHHHTTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHhc
Confidence 11223455666777777554444555444
No 313
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=51.83 E-value=74 Score=23.94 Aligned_cols=155 Identities=12% Similarity=0.030 Sum_probs=81.7
Q ss_pred HHHHHHhHhHHHHhCCHHHHHHHHHHHHHhc-C-CC----hHHHHHHHHHHHHccCc--CchHHHHHHHHhcCcc-cHHH
Q psy17412 46 ADHFKANGNKAFQSGQYEAALVQYDKAIEQV-R-DS----PVLYTNRALTLLHLQLY--DPVLPDCDKALRLDED-NMKA 116 (240)
Q Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~-~-~~----~~~~~~la~~~~~~~~~--~~A~~~~~~~~~~~~~-~~~~ 116 (240)
-+.+..++.-|.++++|++|++++....... . .. .+.-..+..+|.+.+-- ++...-+-+.+...|. .+.
T Consensus 35 HQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~~~~~~~~~rL~~L~~~~~~~~p~- 113 (336)
T 3lpz_A 35 AQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQRVDGASRGKLLGCLRLFQPGEPV- 113 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTSCTTCHH-
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhCCCCCcH-
Confidence 3455667778888999999999876543321 1 11 22233334555554421 1222223333333332 221
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHH-----------
Q psy17412 117 HLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKA----------- 185 (240)
Q Consensus 117 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~----------- 185 (240)
... -..+|+.+-.+. .-.| ..++.++..+|..+.+.+++.+|..+|-..
T Consensus 114 r~~---------fi~~ai~WS~~~-g~~~----------~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ilg~~~s~~~~a~m 173 (336)
T 3lpz_A 114 RKR---------FVKEMIDWSKKF-GDYP----------AGDPELHHVVGTLYVEEGEFEAAEKHLVLGTKESPEVLARM 173 (336)
T ss_dssp HHH---------HHHHHHHHHHHH-SSCT----------TCCHHHHHHHHHHHHHTTCHHHHHHHHTTSCTTHHHHHHHH
T ss_pred HHH---------HHHHHHHHHhhc-CCCC----------CCCHHHHHHHHHHHHccCCHHHHHHHHHhcCCchHHHHHHH
Confidence 000 012222222220 0011 134556999999999999988887776210
Q ss_pred -----hhcChhhHHHHHHHHHH-HHHcCCHHHHHHHHHHHHH
Q psy17412 186 -----LRLDEDNMKAHLYKARA-MHNLGQREEAKEYIRELVE 221 (240)
Q Consensus 186 -----l~~~~~~~~~~~~la~~-~~~~g~~~~A~~~~~~~~~ 221 (240)
.+..|...+.+...+.+ |..+++...|...+....+
T Consensus 174 L~ew~~~~~~~e~dlfiaRaVL~yL~l~n~~~A~~~~~~f~~ 215 (336)
T 3lpz_A 174 EYEWYKQDESHTAPLYCARAVLPYLLVANVRAANTAYRIFTS 215 (336)
T ss_dssp HHHHHHTSCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCccHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 01124445555555554 7789999999887665553
No 314
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=51.26 E-value=33 Score=26.96 Aligned_cols=30 Identities=27% Similarity=0.375 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHcC--CHHHHHHHHHHHHHh
Q psy17412 193 MKAHLYKARAMHNLG--QREEAKEYIRELVEK 222 (240)
Q Consensus 193 ~~~~~~la~~~~~~g--~~~~A~~~~~~~~~~ 222 (240)
.++++..|.++.++| +..+|+..+.++.+.
T Consensus 335 aEv~Li~AEA~~~~gg~~~~~A~~~lN~vR~R 366 (454)
T 3myv_A 335 SEVYLIAAEAGCKLGGDAAVQGLGYLNEIVKR 366 (454)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence 788999999999999 889999998877653
No 315
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=51.14 E-value=48 Score=21.60 Aligned_cols=51 Identities=6% Similarity=-0.027 Sum_probs=42.5
Q ss_pred cCchHHHHHHHHhcC--cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q psy17412 96 YDPVLPDCDKALRLD--EDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPT 146 (240)
Q Consensus 96 ~~~A~~~~~~~~~~~--~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~ 146 (240)
.+++...|....... ...+..|...|..+...|++.+|...|+.+++....
T Consensus 81 ~~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 133 (152)
T 4a1g_A 81 NSDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAE 133 (152)
T ss_dssp BSCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred cCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 456888888877543 566788889999999999999999999999997655
No 316
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=48.17 E-value=91 Score=24.42 Aligned_cols=45 Identities=13% Similarity=0.039 Sum_probs=31.5
Q ss_pred hHHHHHHHHhcC-----cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Q psy17412 99 VLPDCDKALRLD-----EDNMKAHLYKARAMHSLGQREEAKEYVRQLVEK 143 (240)
Q Consensus 99 A~~~~~~~~~~~-----~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 143 (240)
++..|.+++... ..+.-.|..+|-.+++.+++.+|+..+-.+-..
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~V 347 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATV 347 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHHH
Confidence 566666666432 233445777888999999999999988877553
No 317
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=47.91 E-value=37 Score=26.71 Aligned_cols=30 Identities=27% Similarity=0.409 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q psy17412 193 MKAHLYKARAMHNLGQREEAKEYIRELVEK 222 (240)
Q Consensus 193 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 222 (240)
.++++..|.++.++|+..+|...+.++.+.
T Consensus 338 aEv~Li~AEA~~~~g~~~~A~~~lN~vR~R 367 (461)
T 3kez_A 338 SEAYLNAAEAAVQTGDNAKAVKYLNSIVQR 367 (461)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCchHHHHHHHHHHHh
Confidence 788999999999999999999999877653
No 318
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=47.12 E-value=41 Score=19.60 Aligned_cols=37 Identities=5% Similarity=0.157 Sum_probs=28.4
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH
Q psy17412 191 DNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRK 228 (240)
Q Consensus 191 ~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~ 228 (240)
+.......-|.-+++.|+|.+|...|+++.... ++++
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~t-en~~ 87 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNLS-DNEE 87 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHccc-cCHH
Confidence 446667777888899999999999999988664 3443
No 319
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=46.71 E-value=32 Score=26.98 Aligned_cols=32 Identities=16% Similarity=0.180 Sum_probs=27.9
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q psy17412 191 DNMKAHLYKARAMHNLGQREEAKEYIRELVEK 222 (240)
Q Consensus 191 ~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 222 (240)
+..-++..+|++++..|++++|..+.++++..
T Consensus 188 tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 188 NKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 34667889999999999999999999999863
No 320
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=46.46 E-value=83 Score=24.62 Aligned_cols=45 Identities=13% Similarity=0.058 Sum_probs=33.1
Q ss_pred chhhHHHHHhhcCh-----hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17412 177 PVLPDCDKALRLDE-----DNMKAHLYKARAMHNLGQREEAKEYIRELVE 221 (240)
Q Consensus 177 ~A~~~~~~~l~~~~-----~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~ 221 (240)
.++..|.+++.... .+...+..+|-.+++.+++.+|+..+..+-.
T Consensus 297 ~~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~ 346 (550)
T 3u84_A 297 DPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTAT 346 (550)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHH
Confidence 46666666665422 2466778888899999999999999887654
No 321
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=45.71 E-value=43 Score=20.67 Aligned_cols=22 Identities=27% Similarity=0.291 Sum_probs=13.0
Q ss_pred HHHHHHcCCHHHHHHHHHHHHH
Q psy17412 121 ARAMHSLGQREEAKEYVRQLVE 142 (240)
Q Consensus 121 a~~~~~~~~~~~A~~~~~~a~~ 142 (240)
|.-.-..|+|++|+.+|..+++
T Consensus 25 Ave~D~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 25 AAQEDKAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHH
Confidence 3344455677777666666654
No 322
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=45.54 E-value=45 Score=26.34 Aligned_cols=33 Identities=15% Similarity=0.279 Sum_probs=28.6
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q psy17412 191 DNMKAHLYKARAMHNLGQREEAKEYIRELVEKY 223 (240)
Q Consensus 191 ~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~ 223 (240)
+..-++..+|++|+..|++++|..+.++++...
T Consensus 200 tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 200 NYWAAQALLSRVYLNMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred cHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCC
Confidence 345678899999999999999999999998753
No 323
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=45.49 E-value=1.1e+02 Score=24.05 Aligned_cols=47 Identities=13% Similarity=0.027 Sum_probs=33.6
Q ss_pred CchHHHHHHHHhcC-----cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Q psy17412 97 DPVLPDCDKALRLD-----EDNMKAHLYKARAMHSLGQREEAKEYVRQLVEK 143 (240)
Q Consensus 97 ~~A~~~~~~~~~~~-----~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 143 (240)
..++..|++++... ....-.|..+|-.+++.+++.+|+..+..+-..
T Consensus 281 p~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~V 332 (489)
T 4gq4_A 281 PDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATV 332 (489)
T ss_dssp CCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhhhh
Confidence 34667777777542 233445777888888999999999999887553
No 324
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=45.34 E-value=1e+02 Score=23.66 Aligned_cols=89 Identities=9% Similarity=-0.114 Sum_probs=60.7
Q ss_pred hHHHHhCCHHHHHHHHHHHHHhc----C-------------CChHHHHHHHHHHHHccCcCchHHHHHHHHhc-------
Q psy17412 54 NKAFQSGQYEAALVQYDKAIEQV----R-------------DSPVLYTNRALTLLHLQLYDPVLPDCDKALRL------- 109 (240)
Q Consensus 54 ~~~~~~~~~~~A~~~~~~a~~~~----~-------------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~------- 109 (240)
.+.....+.++|++++++..... . ....+...++..|...|+.++|...++++-..
T Consensus 84 ~~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~ 163 (393)
T 4b4t_O 84 ASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSI 163 (393)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCS
T ss_pred HHHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCc
Confidence 34456678899999988764321 0 01345667888999999999999998887632
Q ss_pred Cc-ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17412 110 DE-DNMKAHLYKARAMHSLGQREEAKEYVRQLVE 142 (240)
Q Consensus 110 ~~-~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 142 (240)
+| -....+...+..+...+++..+....-..+.
T Consensus 164 ~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 164 PLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 12 1234555667777888888887776666654
No 325
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=45.30 E-value=45 Score=26.57 Aligned_cols=29 Identities=21% Similarity=0.232 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q psy17412 193 MKAHLYKARAMHNLGQREEAKEYIRELVEK 222 (240)
Q Consensus 193 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 222 (240)
.++++..|.++.+.|+ .+|+..+.++...
T Consensus 347 aEv~Li~AEA~~~~g~-~~A~~~lN~vR~r 375 (495)
T 3lew_A 347 AEIYLINAEAKAHLND-PDAINKLNDLKTA 375 (495)
T ss_dssp HHHHHHHHHHHHHTTC-TTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCC-HHHHHHHHHHHHh
Confidence 7889999999999999 8899888877653
No 326
>3l8r_A PTCA, putative PTS system, cellobiose-specific IIA component; helix; 2.50A {Streptococcus mutans} SCOP: a.7.2.0
Probab=44.86 E-value=54 Score=20.38 Aligned_cols=38 Identities=16% Similarity=0.088 Sum_probs=31.1
Q ss_pred HHHhchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHh
Q psy17412 38 ERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQ 75 (240)
Q Consensus 38 ~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 75 (240)
.......+++.....|....+.|+|++|.+.++++-+.
T Consensus 29 ~II~~aG~ARS~~~eAl~~Ak~gdfe~A~~~l~eA~e~ 66 (120)
T 3l8r_A 29 EIILNSGNARSIVHEAFDAMREKNYILAEQKLQEANDE 66 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 45556678888888899999999999999999888554
No 327
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=44.16 E-value=53 Score=20.02 Aligned_cols=35 Identities=20% Similarity=0.092 Sum_probs=27.9
Q ss_pred hchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHh
Q psy17412 41 ARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQ 75 (240)
Q Consensus 41 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 75 (240)
....+++.....|....+.|+|++|.+.++++-+.
T Consensus 17 ~~aG~Ars~~~eAl~~Ak~gdfe~A~~~l~eA~~~ 51 (109)
T 3k1s_A 17 LNSGNARSFAMEALQFAKQGKMAEADEAMVKAKEA 51 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34456777788888888999999999999888554
No 328
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=43.79 E-value=46 Score=26.47 Aligned_cols=33 Identities=33% Similarity=0.225 Sum_probs=28.8
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q psy17412 191 DNMKAHLYKARAMHNLGQREEAKEYIRELVEKY 223 (240)
Q Consensus 191 ~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~ 223 (240)
+..-++..+|++|+..|++++|..+.++++...
T Consensus 201 tk~aA~allArvyL~~~~~~~A~~~a~~vi~~~ 233 (495)
T 3lew_A 201 DNEVVLGILSRACLYARQWEKAKTYSDKLLAKD 233 (495)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 345678899999999999999999999998754
No 329
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=43.51 E-value=37 Score=26.72 Aligned_cols=32 Identities=16% Similarity=0.133 Sum_probs=27.9
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q psy17412 191 DNMKAHLYKARAMHNLGQREEAKEYIRELVEK 222 (240)
Q Consensus 191 ~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 222 (240)
+..-++..+|++++..|++++|..+.++++..
T Consensus 194 tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 194 NRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred eHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 34667889999999999999999999999863
No 330
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=43.38 E-value=41 Score=26.56 Aligned_cols=29 Identities=28% Similarity=0.400 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHcCCH-HHHHHHHHHHHH
Q psy17412 193 MKAHLYKARAMHNLGQR-EEAKEYIRELVE 221 (240)
Q Consensus 193 ~~~~~~la~~~~~~g~~-~~A~~~~~~~~~ 221 (240)
.++++..|.++.++|+. .+|+.++.++.+
T Consensus 357 aEvyLi~AEA~~~~g~~~~~A~~~lN~vR~ 386 (477)
T 3mcx_A 357 SEVYLNAAEAGLKKGTDIEEAQGYLNDIIS 386 (477)
T ss_dssp HHHHHHHHHHHHHHTSSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCChHHHHHHHHHHHH
Confidence 78899999999999998 899999998876
No 331
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.38 E-value=59 Score=20.05 Aligned_cols=18 Identities=28% Similarity=0.385 Sum_probs=11.2
Q ss_pred cccCchhhHHHHHhhcCh
Q psy17412 173 QLYDPVLPDCDKALRLDE 190 (240)
Q Consensus 173 ~~~~~A~~~~~~~l~~~~ 190 (240)
..+++|..++.++|+.+.
T Consensus 17 ~~h~~AF~~Is~AL~~DE 34 (116)
T 2dl1_A 17 EAYKKAFLFVNKGLNTDE 34 (116)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhh
Confidence 345567777777776554
No 332
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=40.63 E-value=1.1e+02 Score=22.92 Aligned_cols=97 Identities=13% Similarity=0.016 Sum_probs=64.5
Q ss_pred hchhHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhc-----CCChHHHHHHHHHHHHccCcCch-HHHHHHHHhc-----
Q psy17412 41 ARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQV-----RDSPVLYTNRALTLLHLQLYDPV-LPDCDKALRL----- 109 (240)
Q Consensus 41 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~-----~~~~~~~~~la~~~~~~~~~~~A-~~~~~~~~~~----- 109 (240)
....-.+.++.-+..+++.|++..|.++..-.++.. |-+......+..++.....-+-. ....+++++.
T Consensus 50 ~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~~~~~~~~~rL~~L~~~~~~~~p~r~~fi~~ai~WS~~~g 129 (336)
T 3lpz_A 50 NWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQRVDGASRGKLLGCLRLFQPGEPVRKRFVKEMIDWSKKFG 129 (336)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHhhcC
Confidence 344566778888899999999999888775555432 22334555566665554432212 2233344322
Q ss_pred --CcccHHHHHHHHHHHHHcCCHHHHHHHH
Q psy17412 110 --DEDNMKAHLYKARAMHSLGQREEAKEYV 137 (240)
Q Consensus 110 --~~~~~~~~~~la~~~~~~~~~~~A~~~~ 137 (240)
.-.++..+..+|..+.+.+++.+|..+|
T Consensus 130 ~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 130 DYPAGDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp SCTTCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 2356889999999999999999999998
No 333
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=45.00 E-value=6.5 Score=32.75 Aligned_cols=55 Identities=15% Similarity=0.010 Sum_probs=45.7
Q ss_pred hHHHHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCc
Q psy17412 44 DIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDP 98 (240)
Q Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~ 98 (240)
.-.+.....|...+..|+|.-|.++.+.++..+|++..+...++.+|.++|.-.+
T Consensus 459 Gg~~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~ 513 (668)
T 2yhe_A 459 GGADAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTE 513 (668)
Confidence 3456677788888889999999999999999999998888888888888875544
No 334
>2npu_A FKBP12-rapamycin complex-associated protein; four-helix bundle, transferase; NMR {Homo sapiens}
Probab=38.09 E-value=74 Score=19.98 Aligned_cols=57 Identities=7% Similarity=0.029 Sum_probs=35.3
Q ss_pred hHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHHHHHHHh
Q psy17412 52 NGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALR 108 (240)
Q Consensus 52 ~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 108 (240)
....++..++.+..++.+....+.....+......+.....-.+..+|.+.+++..+
T Consensus 46 ASrlyf~~~n~~~m~~~L~pLh~~l~~~PeT~~E~sF~~~fG~~L~~A~~~~~~y~~ 102 (126)
T 2npu_A 46 ASRLYFGERNVKGMFEVLEPLHAMMERGPQTLKETSFNQAYGRDLMEAQEWCRKYMK 102 (126)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcccCHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 445667889999999998777443222233344444444444566777777777653
No 335
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=37.03 E-value=1.3e+02 Score=22.47 Aligned_cols=173 Identities=16% Similarity=0.125 Sum_probs=86.7
Q ss_pred hHhHHHHhCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHccCcCchHHH------H-HH------------HHhcCcc
Q psy17412 52 NGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPD------C-DK------------ALRLDED 112 (240)
Q Consensus 52 ~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~------~-~~------------~~~~~~~ 112 (240)
++..+...|.|+.|..++.+-+..-.- ....-..-.+|....-+-.+... + ++ ++-....
T Consensus 22 laadhvaAGsFe~A~~lLnrQ~Givnf-~PLk~~F~~~y~~s~~~l~~~~~~p~l~~~~~r~~~~~~~~~~lP~i~~~l~ 100 (320)
T 3mkr_B 22 LPVDHILAGSFETAMRLLHDQVGVTQF-GPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLN 100 (320)
T ss_dssp CHHHHHHTTCHHHHHHHHHHHSCBCCC-GGGHHHHHHHHTTSCEEECSSTTSCCEEECCBTTTTTCCSSSCCBCCCCCHH
T ss_pred cHHHHHHccCHHHHHHHHHHHhCccCc-hhhHHHHHHHHHHHhhhccCCCCCCcchhhhcCCccccccccCCCCcccCHH
Confidence 566788999999999999987654211 11111222233321111111000 0 00 0000011
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC----chHHHHHhccCchH--HHHHHHHHH-HHhcccCc-hhhHHHH
Q psy17412 113 NMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPT----RRKLAIEQVRDSPV--LYTNRALTL-LHLQLYDP-VLPDCDK 184 (240)
Q Consensus 113 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~----~~~~~~~~~~~~~~--~~~~la~~~-~~~~~~~~-A~~~~~~ 184 (240)
........|.-+...|++++|+..|+.++..-|- +... .....+... -.+.+|... ....+... ..+...+
T Consensus 101 ~l~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e-~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR 179 (320)
T 3mkr_B 101 DLIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQE-IAEAQQLITICREYIVGLSMETERKKLPKETLEQQKR 179 (320)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHH
Confidence 1233566788889999999999999999886541 1111 000000000 022222211 11122211 1122233
Q ss_pred Hhh---------cChhhHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Q psy17412 185 ALR---------LDEDNMK-AHLYKARAMHNLGQREEAKEYIRELVEKYPTR 226 (240)
Q Consensus 185 ~l~---------~~~~~~~-~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~ 226 (240)
.++ +.|.+.. ++..--...++.++|..|..+.++.+++.|..
T Consensus 180 ~lELAAYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~ 231 (320)
T 3mkr_B 180 ICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKP 231 (320)
T ss_dssp HHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCCH
T ss_pred HHHHHHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCH
Confidence 332 3444332 33333345789999999999999999998864
No 336
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=36.75 E-value=76 Score=20.45 Aligned_cols=31 Identities=19% Similarity=0.186 Sum_probs=26.2
Q ss_pred HHHHHHHhHhHHHHhCCHHHHHHHHHHHHHh
Q psy17412 45 IADHFKANGNKAFQSGQYEAALVQYDKAIEQ 75 (240)
Q Consensus 45 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 75 (240)
.+..++..|..|...|+.+.|.-.|-+...+
T Consensus 39 ta~~llr~A~~y~~egd~e~AYily~R~~~L 69 (146)
T 2xze_A 39 SGVEIIRMASIYSEEGNIEHAFILYNKYITL 69 (146)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 5677888899999999999999998886554
No 337
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=36.74 E-value=87 Score=20.40 Aligned_cols=51 Identities=6% Similarity=-0.037 Sum_probs=41.7
Q ss_pred cCchhhHHHHHhhcC--hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q psy17412 175 YDPVLPDCDKALRLD--EDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPT 225 (240)
Q Consensus 175 ~~~A~~~~~~~l~~~--~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~ 225 (240)
.+++...|.-+.... -..+..|...|..+...|++.+|...|+..++....
T Consensus 81 ~~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 133 (152)
T 4a1g_A 81 NSDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAE 133 (152)
T ss_dssp BSCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred cCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 456888888877654 446788889999999999999999999999987543
No 338
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=36.53 E-value=65 Score=18.90 Aligned_cols=62 Identities=18% Similarity=0.030 Sum_probs=38.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhh
Q psy17412 119 YKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALR 187 (240)
Q Consensus 119 ~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~ 187 (240)
..|..++..|+|=+|-+.++..-...|..... .-..-+....|......|+. |...+.+++.
T Consensus 6 ~~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~-----~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 6 EEVLGLWRAGRYYEVHEVLEPYWLKATGEERR-----LLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCHHHHH-----HHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHhCCChHHHHHHHHHHHhhCCCchHH-----HHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 45667778899999988888888877542211 00111233344445556776 8888888765
No 339
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=35.96 E-value=50 Score=19.27 Aligned_cols=16 Identities=13% Similarity=-0.091 Sum_probs=7.9
Q ss_pred CHHHHHHHHHHHHHhc
Q psy17412 61 QYEAALVQYDKAIEQV 76 (240)
Q Consensus 61 ~~~~A~~~~~~a~~~~ 76 (240)
.+++|..+..+++..+
T Consensus 12 ~h~~AF~~Is~aL~~D 27 (89)
T 3eab_A 12 FHKQAFEYISIALRID 27 (89)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh
Confidence 3445555555555443
No 340
>1ixm_A SPO0B, protein (sporulation response regulatory protein); phosphotransferase, two component system; 2.60A {Bacillus subtilis} SCOP: d.123.1.1 PDB: 2ftk_A* 1f51_A
Probab=35.35 E-value=93 Score=21.09 Aligned_cols=26 Identities=23% Similarity=0.226 Sum_probs=15.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17412 196 HLYKARAMHNLGQREEAKEYIRELVE 221 (240)
Q Consensus 196 ~~~la~~~~~~g~~~~A~~~~~~~~~ 221 (240)
....-.-+.++|++++|.++..+...
T Consensus 35 kLqvI~GLlql~~ydea~~yI~~~~~ 60 (192)
T 1ixm_A 35 KLQLIKGNLSLQKYDRVFEMIEEMVI 60 (192)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 33444446667777777777666543
No 341
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=32.59 E-value=93 Score=24.89 Aligned_cols=30 Identities=20% Similarity=0.233 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q psy17412 193 MKAHLYKARAMHNLGQREEAKEYIRELVEK 222 (240)
Q Consensus 193 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 222 (240)
++++...|.+..++|+..+|..++.++-..
T Consensus 392 AEvlL~yAEA~~e~g~~~~a~~~iN~VR~R 421 (517)
T 3qnk_A 392 AEIYLNDAEARLETGDVEGARKAVNMIRQR 421 (517)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCChHHHHHHHHHHHHh
Confidence 788999999999999999999888777654
No 342
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=31.64 E-value=2.3e+02 Score=23.73 Aligned_cols=31 Identities=13% Similarity=-0.018 Sum_probs=22.0
Q ss_pred HHHHHHHHH--HHcCCHHHHHHHHHHHHHcCCCc
Q psy17412 116 AHLYKARAM--HSLGQREEAKEYVRQLVEKYPTR 147 (240)
Q Consensus 116 ~~~~la~~~--~~~~~~~~A~~~~~~a~~~~~~~ 147 (240)
.+..+..++ +..|+|+.|++.+++ +.+-|-+
T Consensus 538 lLl~l~~f~~~~~~g~~~~AL~~i~~-L~llPl~ 570 (661)
T 2qx5_A 538 LLLNISSIRELYFNKQWQETLSQMEL-LDLLPFS 570 (661)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHH-TSCSCC-
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHh-CCCCCCC
Confidence 344445444 889999999999988 5566765
No 343
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=30.49 E-value=69 Score=25.37 Aligned_cols=30 Identities=23% Similarity=0.310 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q psy17412 193 MKAHLYKARAMHNLGQREEAKEYIRELVEK 222 (240)
Q Consensus 193 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 222 (240)
++++...|.++..+|+..+|+.++.++-+.
T Consensus 361 AEvlL~~AEA~~~~g~~~~A~~~lN~VR~R 390 (481)
T 3jq1_A 361 ADVLLMLAEAYMNKGALDTSIGYINQIRRR 390 (481)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhCChHHHHHHHHHHHHh
Confidence 788999999999999999999988887655
No 344
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=29.68 E-value=96 Score=18.76 Aligned_cols=51 Identities=16% Similarity=0.092 Sum_probs=26.7
Q ss_pred HHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHH
Q psy17412 162 YTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIR 217 (240)
Q Consensus 162 ~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 217 (240)
-......++..|+|++|....+..- .++.--.++.+..+.|-.+++...+.
T Consensus 43 ~lIR~sSLmNrG~Yq~Al~l~~~~c-----~pdlepw~ALce~rlGl~s~le~rL~ 93 (116)
T 2p58_C 43 QLIRLSSLMNRGDYASALQQGNKLA-----YPDLEPWLALCEYRLGLGSALESRLN 93 (116)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTTSC-----CGGGHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHcchhHHHHHHhcCCCC-----CchHHHHHHHHHHhcccHHHHHHHHH
Confidence 3344445566666666665443322 23333444555666666666665553
No 345
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=27.69 E-value=90 Score=24.66 Aligned_cols=33 Identities=18% Similarity=0.159 Sum_probs=28.3
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q psy17412 190 EDNMKAHLYKARAMHNLGQREEAKEYIRELVEK 222 (240)
Q Consensus 190 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 222 (240)
++..-++..+|++++..|++++|..+.++++..
T Consensus 194 ~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 194 FNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 344567889999999999999999999999864
No 346
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=27.16 E-value=77 Score=24.94 Aligned_cols=34 Identities=24% Similarity=0.119 Sum_probs=28.4
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q psy17412 190 EDNMKAHLYKARAMHNLGQREEAKEYIRELVEKY 223 (240)
Q Consensus 190 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~ 223 (240)
++..-++..+|++++.+|++++|..+.++++...
T Consensus 188 ~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~~~ 221 (460)
T 3snx_A 188 PNTDVVNGLMARAYLLTGQWGEAAKAAEAARKGY 221 (460)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTC
T ss_pred cCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 3446678899999999999999999999988643
No 347
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=33.00 E-value=13 Score=30.92 Aligned_cols=52 Identities=19% Similarity=0.144 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHH
Q psy17412 161 LYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEA 212 (240)
Q Consensus 161 ~~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A 212 (240)
.....|...+..|+|.-|.+.++.++..+|++..+...++.++.++|-..+.
T Consensus 463 ~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~~ 514 (668)
T 2yhe_A 463 AVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTEN 514 (668)
Confidence 3455666677889999999999999999999999999999999888866553
No 348
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=26.39 E-value=1.8e+02 Score=20.91 Aligned_cols=30 Identities=17% Similarity=0.124 Sum_probs=25.9
Q ss_pred HHHHHhHhHHHHhCCHHHHHHHHHHHHHhc
Q psy17412 47 DHFKANGNKAFQSGQYEAALVQYDKAIEQV 76 (240)
Q Consensus 47 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~ 76 (240)
+.+..++....+.++|++.+.+++++...+
T Consensus 9 e~~v~~AkLaeqaeRyddm~~~mk~v~~~~ 38 (260)
T 1o9d_A 9 EENVYMAKLAEQAERYEEMVEFMEKVSNSL 38 (260)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHccC
Confidence 445667888889999999999999999977
No 349
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=26.28 E-value=2.2e+02 Score=21.80 Aligned_cols=100 Identities=7% Similarity=-0.077 Sum_probs=62.9
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHcCC-------CchHHHHHhccCchHHHHHHHHHHHHhcccCchhhHHHHHhhc-----
Q psy17412 121 ARAMHSLGQREEAKEYVRQLVEKYP-------TRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRL----- 188 (240)
Q Consensus 121 a~~~~~~~~~~~A~~~~~~a~~~~~-------~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~----- 188 (240)
..+.....+.++|...+++...... ++... .........+...++..|...|+.+.|...++++-..
T Consensus 83 ~~~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~-~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~ 161 (393)
T 4b4t_O 83 LASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGS-KDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKD 161 (393)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCS-SSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccch-hhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccC
Confidence 3455567788899988887643210 00000 0000011234667788899999999999999888532
Q ss_pred --Chh-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17412 189 --DED-NMKAHLYKARAMHNLGQREEAKEYIRELVE 221 (240)
Q Consensus 189 --~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~ 221 (240)
+|. ....+...+..+...+++..+....-..+.
T Consensus 162 ~~~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 162 SIPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp CSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 222 344556677778889999988877766665
No 350
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=26.02 E-value=1.6e+02 Score=23.11 Aligned_cols=29 Identities=10% Similarity=0.154 Sum_probs=17.1
Q ss_pred HHHHHHHHHHhcccCchhhHHHHHhhcCh
Q psy17412 162 YTNRALTLLHLQLYDPVLPDCDKALRLDE 190 (240)
Q Consensus 162 ~~~la~~~~~~~~~~~A~~~~~~~l~~~~ 190 (240)
+...+..+.+.+.|+.|+..++.++....
T Consensus 95 ~~~~i~~f~kg~~~E~ai~l~k~L~~~yE 123 (436)
T 2yin_A 95 YETIIGYFDKGKMWEEAISLCKELAEQYE 123 (436)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 34444455556667777777776665433
No 351
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=25.73 E-value=1.4e+02 Score=19.25 Aligned_cols=38 Identities=18% Similarity=0.163 Sum_probs=28.8
Q ss_pred HHHHHHHhHhHHHHhCCHHHHHHHHHHHHHh---cCCChHH
Q psy17412 45 IADHFKANGNKAFQSGQYEAALVQYDKAIEQ---VRDSPVL 82 (240)
Q Consensus 45 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~---~~~~~~~ 82 (240)
.+..++..|..+...||.+.|.-+|-+.+.+ -|.++..
T Consensus 41 sa~~L~r~A~~y~~EGd~E~AYilymRy~~L~~kIpkHpdy 81 (144)
T 2a9u_A 41 SALKIFKTAEECRLDRDEERAYVLYMKYVTVYNLIKKRPDF 81 (144)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTSHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhcCcch
Confidence 5667888899999999999999888876544 3444444
No 352
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=25.00 E-value=1.1e+02 Score=24.45 Aligned_cols=32 Identities=16% Similarity=-0.002 Sum_probs=28.0
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q psy17412 191 DNMKAHLYKARAMHNLGQREEAKEYIRELVEK 222 (240)
Q Consensus 191 ~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 222 (240)
+..-++..+|++++..+++++|....++++..
T Consensus 180 tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 180 TKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34568889999999999999999999999864
No 353
>2ynq_A ESSB; membrane protein, secretion, type V, secretion system; 2.40A {Geobacillus thermodenitrificans}
Probab=24.63 E-value=1.5e+02 Score=19.46 Aligned_cols=83 Identities=17% Similarity=0.181 Sum_probs=52.9
Q ss_pred HHhHhHHHHhCCHHHHHHHHHHHHHhcCC--ChHHHHHHHHHHHHccCcCch-HHHHHHHHhc--CcccHHHHHHHHHHH
Q psy17412 50 KANGNKAFQSGQYEAALVQYDKAIEQVRD--SPVLYTNRALTLLHLQLYDPV-LPDCDKALRL--DEDNMKAHLYKARAM 124 (240)
Q Consensus 50 ~~~a~~~~~~~~~~~A~~~~~~a~~~~~~--~~~~~~~la~~~~~~~~~~~A-~~~~~~~~~~--~~~~~~~~~~la~~~ 124 (240)
+..+...+-..+|.+.+..++.. +|. .....+.+|..|....+...- .+.....+.+ +|..... +++
T Consensus 12 ~i~a~~afl~~dYs~VI~~L~~~---~~~~Lp~~~kY~LA~SYI~~e~Ls~eQKenIln~itlkSde~yL~Y-----WIy 83 (161)
T 2ynq_A 12 YIQSTELFLQNKYSDVITTLEDY---APEDMPYVIQYELASSYVMTESLTEEQRQTVSNNITLKTDEQYMLY-----WIY 83 (161)
T ss_dssp HHHHHHHHTTTCHHHHHHHHTTS---CGGGSCHHHHHHHHHHHHHTSSSCHHHHHHHHHTCCTTSCHHHHHH-----HHH
T ss_pred HHHHHHHHHHhhHHHHHHHHhcC---ChhhCChhHHHHHHHHHHHccCCCHHHHHHHHhhCCccCCHHHHHH-----HHH
Confidence 33566777888999988877543 332 356788899999998876632 3333333332 3433444 455
Q ss_pred HHcCCHHHHHHHHHHH
Q psy17412 125 HSLGQREEAKEYVRQL 140 (240)
Q Consensus 125 ~~~~~~~~A~~~~~~a 140 (240)
.-.|++++|+..-+..
T Consensus 84 iGRg~~~eAlDiA~~L 99 (161)
T 2ynq_A 84 IGRSQSEEALELARTI 99 (161)
T ss_dssp HHHTCHHHHHHHHHHH
T ss_pred HcCCchHHHHHHHHhc
Confidence 5569999998876553
No 354
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=24.47 E-value=1.9e+02 Score=20.31 Aligned_cols=50 Identities=10% Similarity=-0.089 Sum_probs=40.7
Q ss_pred cCchhhHHHHHhhcC--hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q psy17412 175 YDPVLPDCDKALRLD--EDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYP 224 (240)
Q Consensus 175 ~~~A~~~~~~~l~~~--~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p 224 (240)
.+.+..+|.-+.... -..+..|...|..+...|++.+|...|+..++..-
T Consensus 130 ~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A 181 (223)
T 4aez_C 130 IDEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKA 181 (223)
T ss_dssp CSCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 467778887776543 45678888999999999999999999999998764
No 355
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=24.31 E-value=2e+02 Score=20.70 Aligned_cols=32 Identities=13% Similarity=0.135 Sum_probs=27.1
Q ss_pred HHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCC
Q psy17412 47 DHFKANGNKAFQSGQYEAALVQYDKAIEQVRD 78 (240)
Q Consensus 47 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 78 (240)
+.+..+|...-+.++|++.++..+++.+.++.
T Consensus 32 e~lv~~AKLaeqaeRYddMv~~MK~v~~~~~e 63 (261)
T 3ubw_A 32 EDLVYQAKLAEQAERYDEMVESMKKVAGMDVE 63 (261)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhcCCc
Confidence 45666788889999999999999999988765
No 356
>1ixm_A SPO0B, protein (sporulation response regulatory protein); phosphotransferase, two component system; 2.60A {Bacillus subtilis} SCOP: d.123.1.1 PDB: 2ftk_A* 1f51_A
Probab=23.48 E-value=1.7e+02 Score=19.81 Aligned_cols=27 Identities=19% Similarity=0.196 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17412 116 AHLYKARAMHSLGQREEAKEYVRQLVE 142 (240)
Q Consensus 116 ~~~~la~~~~~~~~~~~A~~~~~~a~~ 142 (240)
-....-.-+.++|++++|..++.+...
T Consensus 34 NkLqvI~GLlql~~ydea~~yI~~~~~ 60 (192)
T 1ixm_A 34 NKLQLIKGNLSLQKYDRVFEMIEEMVI 60 (192)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 334444556677777777777766554
No 357
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=23.43 E-value=2e+02 Score=20.31 Aligned_cols=32 Identities=13% Similarity=0.135 Sum_probs=26.7
Q ss_pred HHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCC
Q psy17412 47 DHFKANGNKAFQSGQYEAALVQYDKAIEQVRD 78 (240)
Q Consensus 47 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 78 (240)
+.+..++....+.++|++.+.+++++...++.
T Consensus 6 e~~v~~AklaeqaeRyddm~~~mk~v~~~~~e 37 (234)
T 2br9_A 6 EDLVYQAKLAEQAERYDEMVESMKKVAGMDVE 37 (234)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHhcccCC
Confidence 34556788888999999999999999987664
No 358
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=23.27 E-value=2.7e+02 Score=21.86 Aligned_cols=59 Identities=10% Similarity=0.068 Sum_probs=39.5
Q ss_pred CchhhHHHHHhhcCh-----hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCcHHHHHHHH
Q psy17412 176 DPVLPDCDKALRLDE-----DNMKAHLYKARAMHNLGQREEAKEYIRELVEK------YPTRRKLVENYT 234 (240)
Q Consensus 176 ~~A~~~~~~~l~~~~-----~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~------~p~~~~~~~~l~ 234 (240)
..++..|.+++.... .+...|..+|-.+.+.+++.+|+..+..+-.. ..++.+++..+.
T Consensus 281 p~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~YnY~reDeEiYke~~ 350 (489)
T 4gq4_A 281 PDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFF 350 (489)
T ss_dssp CCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhhhhhhhcccccchHHHHHHHH
Confidence 346677777766432 24566788888888999999999988876543 234555555443
No 359
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=23.18 E-value=1.3e+02 Score=18.15 Aligned_cols=52 Identities=13% Similarity=-0.000 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhcccCchhhHHHHHhhcChhhHHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy17412 162 YTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRE 218 (240)
Q Consensus 162 ~~~la~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 218 (240)
-......++..|+|++|....+..- .++.--.++.+..+.|-.+++...+.+
T Consensus 42 ~lIR~sSLmNrG~Yq~Al~l~~~~c-----~pdlepw~ALce~rlGl~s~le~rL~~ 93 (115)
T 2uwj_G 42 RLIRISSLANQGRYQEALAFAHGNP-----WPALEPWFALCEWHLGLGAALDRRLAG 93 (115)
T ss_dssp HHHHHHHHHHTTCHHHHHGGGTTCC-----CGGGHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHcchhHHHHHHhcCCCC-----CchHHHHHHHHHHhcccHHHHHHHHHH
Confidence 3444555667777777765543322 233444556666777777777666643
No 360
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=23.04 E-value=1.1e+02 Score=17.56 Aligned_cols=17 Identities=18% Similarity=0.040 Sum_probs=8.0
Q ss_pred hhHHHHHhhcChhhHHH
Q psy17412 179 LPDCDKALRLDEDNMKA 195 (240)
Q Consensus 179 ~~~~~~~l~~~~~~~~~ 195 (240)
+..-.+.++.+|+++..
T Consensus 30 v~~Ai~~L~~~PsnPa~ 46 (85)
T 2ca5_A 30 LTLALDKLAKNPSNPQL 46 (85)
T ss_dssp HHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHcCCCCHHH
Confidence 33333444556655544
No 361
>2cr7_A Paired amphipathic helix protein SIN3B; paired amphipathic helix repeat, transcriptional repressor, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rmr_A 2rms_A
Probab=21.65 E-value=1.2e+02 Score=17.11 Aligned_cols=63 Identities=10% Similarity=0.030 Sum_probs=38.2
Q ss_pred ccCchhhHHHHHhhcChhhHHHHHHHHHHHHH--cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHhh
Q psy17412 174 LYDPVLPDCDKALRLDEDNMKAHLYKARAMHN--LGQREEAKEYIRELVEKYPTRRKLVENYTQAF 237 (240)
Q Consensus 174 ~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~--~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~ 237 (240)
..+.|+.+++++-....+++..|...-.+... .++. .....+.++..+.-+++++...+...+
T Consensus 9 ~~~dA~~yl~~VK~rF~~~p~~Y~~FL~im~~fk~~~~-~~~~v~~rV~~Lf~~hpdLi~gFn~FL 73 (80)
T 2cr7_A 9 HVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSI-DTPGVIRRVSQLFHEHPDLIVGFNAFL 73 (80)
T ss_dssp CSCCSHHHHHHHHHHTSSCHHHHHHHHHHHHHHHTTSS-CHHHHHHHHHHHGGGCHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHcCCHHHHHHHHHHC
Confidence 46778888888766655556665554444332 2222 223566777777777888777666544
No 362
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=21.52 E-value=1.3e+02 Score=23.73 Aligned_cols=31 Identities=23% Similarity=0.315 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q psy17412 193 MKAHLYKARAMHNLGQREEAKEYIRELVEKY 223 (240)
Q Consensus 193 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~ 223 (240)
+++++..|.++.++|+..+|+.++.++....
T Consensus 364 AEv~Li~AEA~~~~g~~~~A~~~lN~vR~Ra 394 (478)
T 3hdx_A 364 EDITLLRAEALCALNRSTEAVSYLNMIRTNR 394 (478)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHc
Confidence 7889999999999999999999998876543
No 363
>3s6n_M SurviVal motor neuron protein; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2leh_B
Probab=21.23 E-value=76 Score=14.69 Aligned_cols=15 Identities=7% Similarity=0.080 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHcC
Q psy17412 130 REEAKEYVRQLVEKY 144 (240)
Q Consensus 130 ~~~A~~~~~~a~~~~ 144 (240)
|++|+..|+.+++..
T Consensus 18 yDKAVaSfk~alk~~ 32 (37)
T 3s6n_M 18 YDKAVASFKHALKNG 32 (37)
T ss_pred HHHHHHHHHHHHhcC
Confidence 567777777776643
No 364
>3qtm_A Uncharacterized protein C4B3.07; tetratricopeptide repeat, enhancer of translation terminatio translation; HET: CME; 2.15A {Schizosaccharomyces pombe} PDB: 3qtn_B
Probab=20.54 E-value=2.5e+02 Score=20.46 Aligned_cols=31 Identities=16% Similarity=0.218 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q psy17412 62 YEAALVQYDKAIEQVRDSPVLYTNRALTLLH 92 (240)
Q Consensus 62 ~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~ 92 (240)
++.|++-.+-.++..|++......++.+.++
T Consensus 101 FDaALERielGLe~~p~s~~L~la~SKILlq 131 (346)
T 3qtm_A 101 IDAAIERAQLGLDAPGNESRLFLALARAYLE 131 (346)
T ss_dssp HHHHHHHHHHGGGSSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhCCCChhHHHHHHHHHHH
Confidence 5677777777777889998877777776664
No 365
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=20.44 E-value=1.2e+02 Score=23.91 Aligned_cols=31 Identities=19% Similarity=0.129 Sum_probs=27.1
Q ss_pred hHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHh
Q psy17412 192 NMKAHLYKARAMHNLG-QREEAKEYIRELVEK 222 (240)
Q Consensus 192 ~~~~~~~la~~~~~~g-~~~~A~~~~~~~~~~ 222 (240)
..++++..|.++.++| +..+|...+.++...
T Consensus 320 ~aEvyLi~AEA~~~~gg~~~~A~~~lN~vR~r 351 (460)
T 3snx_A 320 SAEMYLIEAEAKVRDGVALDQAVAPLNTLRTA 351 (460)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 3788999999999999 999999999887764
No 366
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=20.42 E-value=2.3e+02 Score=20.00 Aligned_cols=32 Identities=19% Similarity=0.195 Sum_probs=27.1
Q ss_pred HHHHHhHhHHHHhCCHHHHHHHHHHHHHhcCC
Q psy17412 47 DHFKANGNKAFQSGQYEAALVQYDKAIEQVRD 78 (240)
Q Consensus 47 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 78 (240)
+.+..+|...-+.++|++.++..+++...++.
T Consensus 9 e~~v~~AklaeqaeRyddM~~~mk~v~~~~~e 40 (236)
T 3iqu_A 9 ASLIQKAKLAEQAERYEDMAAFMKGAVEKGEE 40 (236)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhcCCc
Confidence 34566788889999999999999999988765
Done!