RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17412
(240 letters)
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT
{Human (Homo sapiens) [TaxId: 9606]}
Length = 388
Score = 74.3 bits (181), Expect = 4e-16
Identities = 36/200 (18%), Positives = 68/200 (34%), Gaps = 11/200 (5%)
Query: 40 KARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPV 99
+ D + GN ++ ++ A+ Y +A+ + V++ N A L D
Sbjct: 197 TLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLA 256
Query: 100 LPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSP 159
+ +A+ L A+ A A+ G EA++ + PT
Sbjct: 257 IDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADS--------- 307
Query: 160 VLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIREL 219
N A + + KAL + + AH A + G+ +EA + +E
Sbjct: 308 --LNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEA 365
Query: 220 VEKYPTRRKLVENYTQAFEQ 239
+ PT N ++
Sbjct: 366 IRISPTFADAYSNMGNTLKE 385
Score = 68.5 bits (166), Expect = 4e-14
Identities = 31/171 (18%), Positives = 52/171 (30%), Gaps = 11/171 (6%)
Query: 37 EERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLY 96
+ A ++ G + A+ Y +AIE P Y N A L
Sbjct: 228 RALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSV 287
Query: 97 DPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVR 156
+ ALRL + + A G EEA R+ +E +P
Sbjct: 288 AEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFP----------- 336
Query: 157 DSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLG 207
+ ++N A L L +A+R+ A+ + +
Sbjct: 337 EFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQ 387
Score = 58.9 bits (141), Expect = 8e-11
Identities = 37/219 (16%), Positives = 67/219 (30%), Gaps = 11/219 (5%)
Query: 21 MNDFMRSVEIDAMRRFEERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSP 80
+E + D+ GN G+ E A Y KAIE +
Sbjct: 110 ALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFA 169
Query: 81 VLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQL 140
V ++N + +KA+ LD + + A++ + + A +
Sbjct: 170 VAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRA 229
Query: 141 VEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKA 200
+ P V++ N A L D + +A+ L A+ A
Sbjct: 230 LSLSPNH-----------AVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLA 278
Query: 201 RAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFEQ 239
A+ G EA++ + PT + N +
Sbjct: 279 NALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKRE 317
Score = 51.6 bits (122), Expect = 2e-08
Identities = 23/195 (11%), Positives = 51/195 (26%), Gaps = 23/195 (11%)
Query: 53 GNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDED 112
++ +Q+G +EAA + Q D+ + + + D A++ +
Sbjct: 6 AHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPL 65
Query: 113 NMKAHLYKARA-----------------------MHSLGQREEAKEYVRQLVEKYPTRRK 149
+A+ A +E
Sbjct: 66 LAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 125
Query: 150 LAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQR 209
A++ D + ++ L L + KA+ + A + G+
Sbjct: 126 SALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEI 185
Query: 210 EEAKEYIRELVEKYP 224
A + + V P
Sbjct: 186 WLAIHHFEKAVTLDP 200
Score = 40.8 bits (94), Expect = 7e-05
Identities = 32/227 (14%), Positives = 66/227 (29%), Gaps = 26/227 (11%)
Query: 39 RKARQDIADHFKANGNKA---FQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQL 95
+ + D+ + FQ + + + AI+Q Y+N
Sbjct: 23 MQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQ 82
Query: 96 YDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPT--------- 146
+ ALRL D + ++ A A+ + G E A + ++ P
Sbjct: 83 LQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLG 142
Query: 147 --------------RRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN 192
AIE + V ++N + +KA+ LD +
Sbjct: 143 NLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNF 202
Query: 193 MKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQAFEQ 239
+ A++ + + A + P + N + +
Sbjct: 203 LDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYE 249
Score = 35.8 bits (81), Expect = 0.003
Identities = 8/76 (10%), Positives = 24/76 (31%)
Query: 164 NRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKY 223
A ++ C + R + DN L + + + + + +++
Sbjct: 4 ELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQN 63
Query: 224 PTRRKLVENYTQAFEQ 239
P + N +++
Sbjct: 64 PLLAEAYSNLGNVYKE 79
Score = 34.6 bits (78), Expect = 0.007
Identities = 7/61 (11%), Positives = 19/61 (31%)
Query: 85 NRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKY 144
A ++ C + R + DN L + + + + + +++
Sbjct: 4 ELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQN 63
Query: 145 P 145
P
Sbjct: 64 P 64
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing
protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 201
Score = 61.5 bits (148), Expect = 2e-12
Identities = 47/201 (23%), Positives = 77/201 (38%), Gaps = 21/201 (10%)
Query: 46 ADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDK 105
A K GN+ F +Y A Y +AI + V YTNRAL L +Q + L DC +
Sbjct: 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRR 63
Query: 106 ALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYP------------------TR 147
AL LD ++KAH + + + +EA +++ +
Sbjct: 64 ALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKK 123
Query: 148 RKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLG 207
R +IE+ R + LT L + L +C + ED+ +A
Sbjct: 124 RWNSIEERRIHQESELHSYLTRLIAAERERELEECQRNHEGHEDDGHIRAQQACIEAKH- 182
Query: 208 QREEAKEYIRELVEKYPTRRK 228
++ + EL + +RK
Sbjct: 183 --DKYMADMDELFSQVDEKRK 201
Score = 29.2 bits (64), Expect = 0.36
Identities = 13/130 (10%), Positives = 36/130 (27%), Gaps = 5/130 (3%)
Query: 16 FFLFLMNDFMRSVEIDAMRRFEERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQ 75
L M+ E + G + Y+ A+ +A
Sbjct: 42 TNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSL 101
Query: 76 VRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKE 135
++ + + + + L + ++ + ++ L+ +RE E
Sbjct: 102 AKEQRLNFGDDIPSALRIAKK-----KRWNSIEERRIHQESELHSYLTRLIAAERERELE 156
Query: 136 YVRQLVEKYP 145
++ E +
Sbjct: 157 ECQRNHEGHE 166
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2,
p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Length = 192
Score = 60.2 bits (145), Expect = 6e-12
Identities = 17/185 (9%), Positives = 53/185 (28%), Gaps = 10/185 (5%)
Query: 53 GNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDED 112
G A ++ AL + + + N L+ +++ D+
Sbjct: 12 GVLAADKKDWKGALDAFSAVQD---PHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKH 68
Query: 113 NMKAHLYKARAMHSLGQREEAKEYVRQLVEKYP-----TRRKLAIEQVRDSPVLYTNRAL 167
A+ + + + + A + +++ + + + L ++ + + N A
Sbjct: 69 LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAF 128
Query: 168 TLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRR 227
+ + A + + + + KA + E + +
Sbjct: 129 MYAKKEEWKKAEEQLALATSMKSEPRHSKIDKAMECVWKQKLYEPVVIPVGRL--FRPNE 186
Query: 228 KLVEN 232
+ V
Sbjct: 187 RQVAQ 191
Score = 28.3 bits (62), Expect = 0.70
Identities = 16/121 (13%), Positives = 39/121 (32%), Gaps = 17/121 (14%)
Query: 47 DHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVL----------------YTNRALTL 90
+ G +Q+ +Y+ A+ +A+ Q+R + ++ N A
Sbjct: 71 VAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMY 130
Query: 91 LHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKL 150
+ + A + + + + KA + E + + P R++
Sbjct: 131 AKKEEWKKAEEQLALATSMKSEPRHSKIDKAMECVWKQKLYEPVVIPVGRLFR-PNERQV 189
Query: 151 A 151
A
Sbjct: 190 A 190
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio
parahaemolyticus [TaxId: 670]}
Length = 264
Score = 50.4 bits (120), Expect = 4e-08
Identities = 18/169 (10%), Positives = 48/169 (28%), Gaps = 12/169 (7%)
Query: 52 NGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDE 111
A GQ + AL +AI+ L ++ L ++ ++++L
Sbjct: 2 QWKNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFP 61
Query: 112 DNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLH 171
+ + + + R++ + + + +
Sbjct: 62 EYLPGASQLRHLVKAAQARKDFAQG----------AATAKVLGENEELTKSLVSFNLSMV 111
Query: 172 LQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELV 220
Q Y+ V + L ++ L + ++ ++ EL
Sbjct: 112 SQDYEQVSELALQIEELRQEK--GFLANDTSFSDVRDIDDRLGGYIELF 158
Score = 38.1 bits (88), Expect = 5e-04
Identities = 7/65 (10%), Positives = 18/65 (27%)
Query: 175 YDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYT 234
L +A++ + + G E A E + + ++ +P
Sbjct: 12 LQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLR 71
Query: 235 QAFEQ 239
+
Sbjct: 72 HLVKA 76
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase
alpha-subunit, N-terminal domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 334
Score = 49.6 bits (117), Expect = 9e-08
Identities = 27/213 (12%), Positives = 59/213 (27%), Gaps = 16/213 (7%)
Query: 16 FFLFLMNDFMRSVEIDAMRRFEERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQ 75
+ L + + + E++ RF E ++ A + L D I +
Sbjct: 115 WLLSRLPEPNWARELELCARFLEAD-ERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITR 173
Query: 76 VRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKE 135
+ + R+ L L D RL E+ + L + +++
Sbjct: 174 NFSNYSSWHYRSCLLPQLHPQP----DSGPQGRLPENVLLKELELVQNAFFTDPNDQSAW 229
Query: 136 YVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKA 195
+ + + + LQ + + ++ +
Sbjct: 230 FYHRWLLGRA-----------EPLFRCELSVEKSTVLQSELESCKELQELEPENKWCLLT 278
Query: 196 HLYKARAMHNLGQREEAKEYIRELVEKYPTRRK 228
+ RA+ L +E +Y L P R
Sbjct: 279 IILLMRALDPLLYEKETLQYFSTLKAVDPMRAA 311
Score = 36.9 bits (84), Expect = 0.001
Identities = 31/219 (14%), Positives = 62/219 (28%), Gaps = 22/219 (10%)
Query: 29 EIDAMRRFEERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRAL 88
E +R E + + +A K E+ L + + D L+ R
Sbjct: 12 EQAEAKRLEREQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANPDFATLWNCRRE 71
Query: 89 TLLHL----------QLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQR--EEAKEY 136
L HL L L + LR++ + ++ + L + E
Sbjct: 72 VLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELEL 131
Query: 137 VRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAH 196
+ +E R+ R + L D + + N +
Sbjct: 132 CARFLEADE----------RNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSW 181
Query: 197 LYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQ 235
Y++ + L + ++ R +LV+N
Sbjct: 182 HYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFF 220
Score = 32.7 bits (73), Expect = 0.032
Identities = 13/168 (7%), Positives = 31/168 (18%), Gaps = 18/168 (10%)
Query: 39 RKARQDIADHFKANGNKAF---QSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQL 95
++ + ++ Q + Q + L N
Sbjct: 168 DSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQN----AFFTDP 223
Query: 96 YDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQV 155
D + L + + L E+ + +++L +
Sbjct: 224 NDQSAWFYHRWLLGRAEPLFRCELSVEKSTVLQSELESCKELQELEPENK---------- 273
Query: 156 RDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAM 203
+ L L L +D
Sbjct: 274 -WCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKF 320
Score = 30.4 bits (67), Expect = 0.19
Identities = 6/89 (6%), Positives = 17/89 (19%)
Query: 36 FEERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQL 95
R + + + K+ + + + + + + L L
Sbjct: 232 HRWLLGRAEPLFRCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLY 291
Query: 96 YDPVLPDCDKALRLDEDNMKAHLYKARAM 124
L +D
Sbjct: 292 EKETLQYFSTLKAVDPMRAAYLDDLRSKF 320
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1
(PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Length = 323
Score = 49.4 bits (116), Expect = 1e-07
Identities = 31/180 (17%), Positives = 59/180 (32%), Gaps = 5/180 (2%)
Query: 35 RFEERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQ 94
+FEE +D F+ G + Q G A++ ++ A++Q + T +
Sbjct: 9 QFEEENPLRDHPQPFE-EGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENE 67
Query: 95 LYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRK----L 150
+ + L L DN A + A + + + +A E +R + P
Sbjct: 68 QELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPA 127
Query: 151 AIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQRE 210
+LL L+ V A+RLD ++ + + E
Sbjct: 128 EEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGE 187
Score = 40.2 bits (92), Expect = 1e-04
Identities = 26/157 (16%), Positives = 51/157 (32%)
Query: 30 IDAMRRFEERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALT 89
+ D G SG+Y+ A+ + A+ + +L+ T
Sbjct: 156 KELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGAT 215
Query: 90 LLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRK 149
L + + + +AL L +++ + +LG EA E+ + + R
Sbjct: 216 LANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRG 275
Query: 150 LAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKAL 186
E S +++ L L L D + L
Sbjct: 276 PRGEGGAMSENIWSTLRLALSMLGQSDAYGAADARDL 312
Score = 37.5 bits (85), Expect = 0.001
Identities = 22/140 (15%), Positives = 40/140 (28%), Gaps = 15/140 (10%)
Query: 104 DKALRLDEDN----MKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSP 159
DK + +E+N + G A V++ P
Sbjct: 5 DKGYQFEEENPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDP-----------KHM 53
Query: 160 VLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIREL 219
+ T + + + L L DN A + A + N + +A E +R+
Sbjct: 54 EAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDW 113
Query: 220 VEKYPTRRKLVENYTQAFEQ 239
+ P LV +
Sbjct: 114 LRYTPAYAHLVTPAEEGAGG 133
Score = 30.9 bits (68), Expect = 0.11
Identities = 29/212 (13%), Positives = 54/212 (25%), Gaps = 40/212 (18%)
Query: 53 GNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDED 112
G ++ Q A+ + +E D+ A++ + L LR
Sbjct: 60 GTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPA 119
Query: 113 NMKAHLYKARA---------------MHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVR- 156
+ S E KE V PT ++
Sbjct: 120 YAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLG 179
Query: 157 ------------------------DSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN 192
+ +L+ TL + + + +AL L
Sbjct: 180 VLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGY 239
Query: 193 MKAHLYKARAMHNLGQREEAKEYIRELVEKYP 224
+++ + NLG EA E+ E +
Sbjct: 240 IRSRYNLGISCINLGAHREAVEHFLEALNMQR 271
Score = 30.5 bits (67), Expect = 0.16
Identities = 17/138 (12%), Positives = 39/138 (28%), Gaps = 11/138 (7%)
Query: 16 FFLFLMNDFMRSVEIDAMRRFEERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQ 75
L ++ + + R + + G Q E A+ Y +A+E
Sbjct: 176 CGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALEL 235
Query: 76 VRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN-----------MKAHLYKARAM 124
N ++ ++L + + +AL + + A+
Sbjct: 236 QPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLAL 295
Query: 125 HSLGQREEAKEYVRQLVE 142
LGQ + + +
Sbjct: 296 SMLGQSDAYGAADARDLS 313
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 159
Score = 45.8 bits (107), Expect = 6e-07
Identities = 29/100 (29%), Positives = 49/100 (49%)
Query: 46 ADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDK 105
A+ K N F++ YE A+ Y +AIE + + Y NR+L L + Y L D +
Sbjct: 10 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATR 69
Query: 106 ALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYP 145
A+ LD+ +K + +A + +LG+ A +V+ P
Sbjct: 70 AIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKP 109
Score = 29.6 bits (65), Expect = 0.20
Identities = 12/56 (21%), Positives = 24/56 (42%)
Query: 181 DCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKLVENYTQA 236
D +A+ LD+ +K + +A + LG+ A +V+ P + Y +
Sbjct: 66 DATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQEC 121
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium
tepidum [TaxId: 1097]}
Length = 156
Score = 45.1 bits (105), Expect = 1e-06
Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 24/172 (13%)
Query: 40 KARQDIAD--HFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYD 97
K +++ ++ + +G+Y+ A +A+E P
Sbjct: 1 KPLKEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMP----------------- 43
Query: 98 PVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRD 157
++A + H A A+ L +EA + + + R +L ++ +
Sbjct: 44 -----PEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDEGKL 98
Query: 158 SPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQR 209
+RAL L L +P+ K + + E+ K R M R
Sbjct: 99 WISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAIDR 150
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Length = 128
Score = 42.5 bits (99), Expect = 5e-06
Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 4/122 (3%)
Query: 46 ADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDK 105
A K GN A++ ++ AL YDKA E + TN+A Y+ C+K
Sbjct: 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEK 63
Query: 106 ALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNR 165
A+ + +N + + A+A +G +E + + Y ++ + R VL +
Sbjct: 64 AIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFY----NKSLAEHRTPDVLKKCQ 119
Query: 166 AL 167
Sbjct: 120 QA 121
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 41.2 bits (95), Expect = 1e-05
Identities = 30/103 (29%), Positives = 45/103 (43%)
Query: 44 DIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDC 103
+ + K GNKA G + AL Y +AI+ + VLY+NR+ Y D
Sbjct: 1 EQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDG 60
Query: 104 DKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPT 146
K + L D K + KA A+ L + EEAK + ++
Sbjct: 61 CKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEAN 103
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase
alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Length = 315
Score = 41.1 bits (95), Expect = 5e-05
Identities = 21/150 (14%), Positives = 48/150 (32%), Gaps = 12/150 (8%)
Query: 60 GQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQ-LYDPVLPDCDKALRLDEDNMKAHL 118
+ E A AIE + ++ R + L LQ + + N +
Sbjct: 57 ERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWH 116
Query: 119 YKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPV 178
++ + L + E++ ++ + + + +R + +L+D
Sbjct: 117 HRRVLVEWLRDPSQELEFIADILNQDA-----------KNYHAWQHRQWVIQEFKLWDNE 165
Query: 179 LPDCDKALRLDEDNMKAHLYKARAMHNLGQ 208
L D+ L+ D N + + N
Sbjct: 166 LQYVDQLLKEDVRNNSVWNQRYFVISNTTG 195
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey
(Saimiri boliviensis) [TaxId: 27679]}
Length = 168
Score = 38.4 bits (88), Expect = 3e-04
Identities = 26/186 (13%), Positives = 53/186 (28%), Gaps = 31/186 (16%)
Query: 42 RQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLP 101
+ + A K G F+ G+Y A++QY K + + L
Sbjct: 11 KLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGL------------------- 51
Query: 102 DCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVL 161
++ + + A L A + K A+ +
Sbjct: 52 SEKESKASESFLLAAFLNLAMCY-----------LKLREYTKAVECCDKALGLDSANEKG 100
Query: 162 YTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEA-KEYIRELV 220
R L + ++ D +K L ++ N A L + E + +
Sbjct: 101 LYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMCQKKAKEHNERDRRTYANMF 160
Query: 221 EKYPTR 226
+K+ +
Sbjct: 161 KKFAEQ 166
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl
isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Length = 153
Score = 37.7 bits (86), Expect = 4e-04
Identities = 26/120 (21%), Positives = 45/120 (37%), Gaps = 16/120 (13%)
Query: 42 RQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSP----------------VLYTN 85
+ A K GN+ F+ + A+V+Y +A++ + N
Sbjct: 13 KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLN 72
Query: 86 RALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYP 145
A + Y + K L++D++N+KA A G EEAKE + + P
Sbjct: 73 LATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNP 132
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId:
562]}
Length = 259
Score = 38.3 bits (87), Expect = 4e-04
Identities = 32/223 (14%), Positives = 68/223 (30%), Gaps = 30/223 (13%)
Query: 32 AMRRFEERKARQDIADHFKAN-----GNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNR 86
+ R E+ A + + D +A G G A + +A+ D P ++
Sbjct: 18 ILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYL 77
Query: 87 ALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLV----- 141
+ L +D D L LD AHL + A++ G+ + A++ +
Sbjct: 78 GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPN 137
Query: 142 --------------------EKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPD 181
++ + ++ + + + L + + D
Sbjct: 138 DPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKAD 197
Query: 182 CDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYP 224
L E + + Y + +LG + A + V
Sbjct: 198 ATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNV 240
Score = 36.3 bits (82), Expect = 0.002
Identities = 29/190 (15%), Positives = 53/190 (27%), Gaps = 25/190 (13%)
Query: 44 DIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDC 103
D+ + F G Q+G ++AA +D +E + NR + L + D
Sbjct: 69 DMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDL 128
Query: 104 DKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVR------------------------- 138
+ D ++ L+ A L +++ + +
Sbjct: 129 LAFYQDDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQ 188
Query: 139 QLVEKYPTRRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLY 198
L+E+ L L D A+ + N H Y
Sbjct: 189 TLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRY 248
Query: 199 KARAMHNLGQ 208
+ LGQ
Sbjct: 249 ALLELSLLGQ 258
Score = 34.4 bits (77), Expect = 0.008
Identities = 15/114 (13%), Positives = 26/114 (22%)
Query: 16 FFLFLMNDFMRSVEIDAMRRFEERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQ 75
+L + + + FE+ Q + + + E
Sbjct: 145 LYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSL 204
Query: 76 VRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQ 129
L L D A+ + N H Y + LGQ
Sbjct: 205 AEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALLELSLLGQ 258
Score = 29.4 bits (64), Expect = 0.30
Identities = 16/126 (12%), Positives = 36/126 (28%)
Query: 20 LMNDFMRSVEIDAMRRFEERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDS 79
L + D + F + + + Q + L Q+ + ++ +
Sbjct: 115 LYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWG 174
Query: 80 PVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQ 139
+ + L + + D L E + + Y + SLG + A +
Sbjct: 175 WNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKL 234
Query: 140 LVEKYP 145
V
Sbjct: 235 AVANNV 240
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus)
[TaxId: 9913]}
Length = 169
Score = 37.8 bits (86), Expect = 4e-04
Identities = 27/131 (20%), Positives = 50/131 (38%), Gaps = 16/131 (12%)
Query: 31 DAMRRFEERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVR------------- 77
DA ++ I++ K GN F+S +E A+ +Y K + V
Sbjct: 12 DADVDLKDVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAK 71
Query: 78 ---DSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAK 134
+ N L + + + C +AL +D N KA +A+ L + ++A
Sbjct: 72 LQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQAL 131
Query: 135 EYVRQLVEKYP 145
+++ E P
Sbjct: 132 ADLKKAQEIAP 142
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 37.0 bits (84), Expect = 8e-04
Identities = 30/182 (16%), Positives = 55/182 (30%), Gaps = 31/182 (17%)
Query: 42 RQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYDPVLP 101
+ + + K G F+ G+Y+ AL+QY K L
Sbjct: 9 KLEQSTIVKERGTVYFKEGKYKQALLQYKKI-------------------VSWLEYESSF 49
Query: 102 DCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVL 161
++A + + +HL A Q A+E ++
Sbjct: 50 SNEEAQKAQALRLASHLNLAMCHL-----------KLQAFSAAIESCNKALELDSNNEKG 98
Query: 162 YTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLG-QREEAKEYIRELV 220
+ R L + ++ D K L+L +N A A + Q K+ +
Sbjct: 99 LSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMF 158
Query: 221 EK 222
E+
Sbjct: 159 ER 160
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 290
Score = 35.3 bits (80), Expect = 0.004
Identities = 21/218 (9%), Positives = 49/218 (22%), Gaps = 20/218 (9%)
Query: 43 QDIADHFKANGNKAFQSGQYEAALVQYDKAIE------QVRDSPVLYTNRALTLLHLQLY 96
++ AD + A + KA + ++ Y
Sbjct: 34 EEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNS 93
Query: 97 DPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKL--AIEQ 154
+ + A+++ + E + ++ Y + +
Sbjct: 94 VNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQS 153
Query: 155 VRDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDN-------MKAHLYKARAMHNLG 207
V S + A Y K ++ N L K
Sbjct: 154 VALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAAT 213
Query: 208 QREEAKEYIRELVEKYPT-----RRKLVENYTQAFEQE 240
A ++E + P +++ A +
Sbjct: 214 DAVAAARTLQEGQSEDPNFADSRESNFLKSLIDAVNEG 251
Score = 27.2 bits (59), Expect = 1.8
Identities = 17/113 (15%), Positives = 31/113 (27%)
Query: 32 AMRRFEERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLL 91
A + + ++ F + GQY A Y K I+ + + + L
Sbjct: 144 AGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFL 203
Query: 92 HLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKY 144
L D A R ++ A + S + E+
Sbjct: 204 KKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESNFLKSLIDAVNEGDSEQL 256
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId:
9606]}
Length = 497
Score = 34.4 bits (78), Expect = 0.011
Identities = 14/143 (9%), Positives = 32/143 (22%), Gaps = 21/143 (14%)
Query: 105 KALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKL-----------AIE 153
+A L D + L A S ++ + + +Y +K+ I
Sbjct: 11 QAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQIT 70
Query: 154 QVRDSPVLYTNRALTLLHLQL----------YDPVLPDCDKALRLDEDNMKAHLYKARAM 203
++ N + + L Y +L + +D
Sbjct: 71 TLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIIS 130
Query: 204 HNLGQREEAKEYIRELVEKYPTR 226
+ +
Sbjct: 131 NKQTHTSAIVKPQSSSCSYICQH 153
Score = 28.2 bits (62), Expect = 0.94
Identities = 11/98 (11%), Positives = 26/98 (26%)
Query: 38 ERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDSPVLYTNRALTLLHLQLYD 97
G+ A Q A Y A + V + Y A+ +
Sbjct: 144 SSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHL 203
Query: 98 PVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKE 135
+ +++ + A +A+ + + +
Sbjct: 204 TTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVK 241
Score = 25.9 bits (56), Expect = 5.7
Identities = 7/46 (15%), Positives = 17/46 (36%)
Query: 184 KALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRRKL 229
+A L D + L A + ++ + + +Y +K+
Sbjct: 11 QAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKV 56
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III
{Escherichia coli [TaxId: 562]}
Length = 366
Score = 32.6 bits (72), Expect = 0.042
Identities = 18/201 (8%), Positives = 48/201 (23%), Gaps = 11/201 (5%)
Query: 32 AMRRFEERKARQDIADHFKANGNKAFQSGQYEAALVQYDKAIEQVRDS-----PVLYTNR 86
+ + + + + + + A IE +
Sbjct: 119 QLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAML 178
Query: 87 ALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPT 146
L D ++ L + + + A +
Sbjct: 179 IQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRH 238
Query: 147 RRKLAIEQVRDSPVLYTNRALTLLHLQLYDPVLPDCDKAL------RLDEDNMKAHLYKA 200
K + N A + L ++P ++ RL D + L
Sbjct: 239 TAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLN 298
Query: 201 RAMHNLGQREEAKEYIRELVE 221
+ G++ +A+ + + ++
Sbjct: 299 QLYWQAGRKSDAQRVLLDALK 319
Score = 26.0 bits (55), Expect = 5.2
Identities = 19/157 (12%), Positives = 39/157 (24%), Gaps = 8/157 (5%)
Query: 56 AFQSGQYEAALVQYDKAIEQVRDSP-----VLYTNRALTLLHLQLYDPVLPDCDKALRLD 110
A G + A A+E++ V + L L + ++
Sbjct: 22 AINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMA 81
Query: 111 EDNMKAH---LYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRAL 167
+ H + L + + + + + +EQ+ L RA
Sbjct: 82 RQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQ 141
Query: 168 TLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMH 204
L D + + + AM
Sbjct: 142 LLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAML 178
>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR,
middle domain {Mycobacterium tuberculosis [TaxId: 1773]}
Length = 179
Score = 29.1 bits (64), Expect = 0.36
Identities = 24/132 (18%), Positives = 39/132 (29%), Gaps = 23/132 (17%)
Query: 108 RLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPTRRKLAIEQVRDSPVLYTNRAL 167
D A + G+ E+A ++ + ++ PVL R
Sbjct: 5 TCDLGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRG------------PVLDDLRDF 52
Query: 168 TLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPTRR 227
+ A L ED + AH KA A G+ + L ++P R
Sbjct: 53 QFVEPF-----------ATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFEHPYRE 101
Query: 228 KLVENYTQAFEQ 239
L A+
Sbjct: 102 PLWTQLITAYYL 113
>d1q52a_ c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 297
Score = 27.8 bits (60), Expect = 1.2
Identities = 8/36 (22%), Positives = 14/36 (38%)
Query: 108 RLDEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEK 143
LD+ + L+ A +EA E ++K
Sbjct: 250 LLDDGLVGQQLFAGEATRLAYMTDEAVEGRDAFLQK 285
Score = 27.0 bits (58), Expect = 1.9
Identities = 8/36 (22%), Positives = 14/36 (38%)
Query: 187 RLDEDNMKAHLYKARAMHNLGQREEAKEYIRELVEK 222
LD+ + L+ A +EA E ++K
Sbjct: 250 LLDDGLVGQQLFAGEATRLAYMTDEAVEGRDAFLQK 285
>d1yf9a1 d.20.1.1 (A:13-170) Ubiquitin conjugating enzyme, UBC
{Leishmania major [TaxId: 5664]}
Length = 158
Score = 25.8 bits (56), Expect = 3.4
Identities = 17/83 (20%), Positives = 29/83 (34%), Gaps = 13/83 (15%)
Query: 156 RDSPVLYTNRALTLLHLQLYDPVLPDCDKALRLDEDNMKAHLYKARAMHNLGQREEAKEY 215
+P+ + QL P+ L + AHL A R
Sbjct: 88 TWTPMYQLENIFDVFLPQLLR--YPNPSDPLNVQA----AHLLHA-------DRVGFDAL 134
Query: 216 IRELVEKYPTRRKLVENYTQAFE 238
+RE V + T +K +E+ +A+
Sbjct: 135 LREHVSTHATPQKALESIPEAYR 157
>d2bfda1 c.36.1.11 (A:6-400) Branched-chain alpha-keto acid
dehydrogenase, PP module {Human (Homo sapiens) [TaxId:
9606]}
Length = 395
Score = 26.0 bits (56), Expect = 4.5
Identities = 6/37 (16%), Positives = 16/37 (43%)
Query: 189 DEDNMKAHLYKARAMHNLGQREEAKEYIRELVEKYPT 225
+ + + + +Y+ Q+E +++ E YP
Sbjct: 354 NPNLLFSDVYQEMPAQLRKQQESLARHLQTYGEHYPL 390
Score = 25.6 bits (55), Expect = 5.7
Identities = 6/37 (16%), Positives = 16/37 (43%)
Query: 110 DEDNMKAHLYKARAMHSLGQREEAKEYVRQLVEKYPT 146
+ + + + +Y+ Q+E +++ E YP
Sbjct: 354 NPNLLFSDVYQEMPAQLRKQQESLARHLQTYGEHYPL 390
>d2hw4a1 d.322.1.1 (A:5-122) Phosphohistidine phosphatase 1, PHP14
{Human (Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 24.3 bits (53), Expect = 7.7
Identities = 15/65 (23%), Positives = 22/65 (33%), Gaps = 14/65 (21%)
Query: 171 HLQLYDPVLPDCDKA-----------LRLDEDNMKAHLYKARAMHNLGQREEAKEYIREL 219
H +YD V D K + + K H+Y + Q + E I+
Sbjct: 49 HADIYDKVSGDMQKQGCDCECLGGGRISHQSQDKKIHVYGYSMAYGPAQHAISTEKIK-- 106
Query: 220 VEKYP 224
KYP
Sbjct: 107 -AKYP 110
>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha
chain {Azotobacter vinelandii [TaxId: 354]}
Length = 477
Score = 25.4 bits (55), Expect = 8.3
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 209 REEAKEYIRELVEKYPTR 226
REE + I+E++E YP +
Sbjct: 3 REEVESLIQEVLEVYPEK 20
>d2op5a1 d.58.4.22 (A:4-115) Hypothetical protein GOS_7213774
{environmental samples}
Length = 112
Score = 24.4 bits (53), Expect = 8.6
Identities = 8/48 (16%), Positives = 15/48 (31%)
Query: 14 PTFFLFLMNDFMRSVEIDAMRRFEERKARQDIADHFKANGNKAFQSGQ 61
F L DF E++ + + +D+ A G +
Sbjct: 4 TAFLNSLFMDFTSENELELFLKSLDEVWSEDLYSRLSAAGLIRHVISK 51
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 124
Score = 24.3 bits (53), Expect = 8.9
Identities = 10/46 (21%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Query: 184 KALRLDEDNMKAHLY-KARAMHNLGQREEAKEYIRELVEKYPTRRK 228
+ E + LY + LG+ AK Y+ L E ++
Sbjct: 63 DIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQ 108
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.135 0.384
Gapped
Lambda K H
0.267 0.0599 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 880,736
Number of extensions: 41796
Number of successful extensions: 318
Number of sequences better than 10.0: 1
Number of HSP's gapped: 287
Number of HSP's successfully gapped: 84
Length of query: 240
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 157
Effective length of database: 1,268,006
Effective search space: 199076942
Effective search space used: 199076942
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (23.7 bits)