BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17416
(290 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5RDZ2|CRYL1_PONAB Lambda-crystallin homolog OS=Pongo abelii GN=CRYL1 PE=2 SV=3
Length = 319
Score = 168 bits (426), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/166 (49%), Positives = 111/166 (66%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGL 182
G+IG++WAM+FAS G++V LYD+ +QI NA I+ ++ Q G LKGSLS EEQ L
Sbjct: 15 GVIGRSWAMLFASGGFQVKLYDIEQQQIRNALENIRKEMKLLEQAGSLKGSLSVEEQLSL 74
Query: 183 ISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEH 242
ISG P ++E +E A+ IQE VPE L++K +++ +D + ILSSSTS +PS L
Sbjct: 75 ISGCPNIQEAVEGAMHIQECVPEDLELKKKIFAQLDSIIDDRVILSSSTSCLMPSKLFAG 134
Query: 243 STHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIG 288
H Q IVAHPVNPPY+IPLVE+VP T+ + RT +M +IG
Sbjct: 135 LVHVKQCIVAHPVNPPYYIPLVELVPHPETAPTTVDRTHALMKKIG 180
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 85/133 (63%), Gaps = 1/133 (0%)
Query: 1 TPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTH 60
P ++E +E A+ IQE VPE L++K +++ +D + ILSSSTS +PS L H
Sbjct: 78 CPNIQEAVEGAMHIQECVPEDLELKKKIFAQLDSIIDDRVILSSSTSCLMPSKLFAGLVH 137
Query: 61 RSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNR 120
Q IVAHPVNPPY+IPLVE+VP T+ + RT +M +IG P+ + E+ GF LNR
Sbjct: 138 VKQCIVAHPVNPPYYIPLVELVPHPETAPTTVDRTHALMKKIGQCPMRVQKEVAGFVLNR 197
Query: 121 I-HGLIGQAWAMI 132
+ + +I +AW ++
Sbjct: 198 LQYAIISEAWRLV 210
>sp|Q9Y2S2|CRYL1_HUMAN Lambda-crystallin homolog OS=Homo sapiens GN=CRYL1 PE=1 SV=3
Length = 319
Score = 168 bits (426), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/166 (49%), Positives = 111/166 (66%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGL 182
G+IG++WAM+FAS G++V LYD+ +QI NA I+ ++ Q G LKGSLS EEQ L
Sbjct: 15 GVIGRSWAMLFASGGFQVKLYDIEQQQIRNALENIRKEMKLLEQAGSLKGSLSVEEQLSL 74
Query: 183 ISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEH 242
ISG P ++E +E A+ IQE VPE L++K +++ +D + ILSSSTS +PS L
Sbjct: 75 ISGCPNIQEAVEGAMHIQECVPEDLELKKKIFAQLDSIIDDRVILSSSTSCLMPSKLFAG 134
Query: 243 STHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIG 288
H Q IVAHPVNPPY+IPLVE+VP T+ + RT +M +IG
Sbjct: 135 LVHVKQCIVAHPVNPPYYIPLVELVPHPETAPTTVDRTHALMKKIG 180
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 85/133 (63%), Gaps = 1/133 (0%)
Query: 1 TPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTH 60
P ++E +E A+ IQE VPE L++K +++ +D + ILSSSTS +PS L H
Sbjct: 78 CPNIQEAVEGAMHIQECVPEDLELKKKIFAQLDSIIDDRVILSSSTSCLMPSKLFAGLVH 137
Query: 61 RSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNR 120
Q IVAHPVNPPY+IPLVE+VP T+ + RT +M +IG P+ + E+ GF LNR
Sbjct: 138 VKQCIVAHPVNPPYYIPLVELVPHPETAPTTVDRTHALMKKIGQCPMRVQKEVAGFVLNR 197
Query: 121 I-HGLIGQAWAMI 132
+ + +I +AW ++
Sbjct: 198 LQYAIISEAWRLV 210
>sp|Q8SQ26|CRYL1_PIG Lambda-crystallin homolog OS=Sus scrofa GN=CRYL1 PE=2 SV=3
Length = 322
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 109/166 (65%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGL 182
GLIG++WAM+FAS G++V LYD+ +Q+ A +TI+ ++ Q G LKGSL EEQ L
Sbjct: 18 GLIGRSWAMLFASGGFRVKLYDIEQQQVTGALDTIRKEMKLLEQSGALKGSLGAEEQLAL 77
Query: 183 ISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEH 242
ISG LRE +E + IQE VPE L++K Q++ +D + N +LSSS+S LPS L
Sbjct: 78 ISGCSDLREAVEGTVHIQECVPENLELKQQLFAQLDQIVDGNVVLSSSSSCLLPSKLFAG 137
Query: 243 STHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIG 288
H Q +VAHPVNPPY +PLVE+VP T+ + RT +M +IG
Sbjct: 138 LVHVRQCLVAHPVNPPYHVPLVELVPHPETAPATMARTYALMRQIG 183
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 86/132 (65%), Gaps = 1/132 (0%)
Query: 4 LRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQ 63
LRE +E + IQE VPE L++K Q++ +D + N +LSSS+S LPS L H Q
Sbjct: 84 LREAVEGTVHIQECVPENLELKQQLFAQLDQIVDGNVVLSSSSSCLLPSKLFAGLVHVRQ 143
Query: 64 FIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI-H 122
+VAHPVNPPY +PLVE+VP T+ + RT +M +IG PV + E+ GFALNR+ +
Sbjct: 144 CLVAHPVNPPYHVPLVELVPHPETAPATMARTYALMRQIGQSPVRILKEVDGFALNRLQY 203
Query: 123 GLIGQAWAMIFA 134
LIG+AW ++ A
Sbjct: 204 ALIGEAWRLVEA 215
>sp|Q99KP3|CRYL1_MOUSE Lambda-crystallin homolog OS=Mus musculus GN=Cryl1 PE=2 SV=3
Length = 319
Score = 144 bits (364), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 108/166 (65%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGL 182
GLIG++WAM+FAS G+KV LYD+ +QI +A I+ ++ Q G LKGSLS E Q L
Sbjct: 15 GLIGRSWAMLFASGGFKVKLYDIEQQQITDALENIRKEMKSLEQSGSLKGSLSAERQLSL 74
Query: 183 ISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEH 242
ISG L E +E A+ IQE VPE L++K +++ +D + ILSSS+S LPS L
Sbjct: 75 ISGCGNLAEAVEGAVHIQECVPENLELKKKIFAQLDRIVDDRVILSSSSSCLLPSKLFSG 134
Query: 243 STHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIG 288
H Q IVAHPVNPPY++PLVE+VP T+ + RT +M +IG
Sbjct: 135 LAHVKQCIVAHPVNPPYYVPLVELVPHPETAPATMDRTYALMKKIG 180
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
Query: 4 LRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQ 63
L E +E A+ IQE VPE L++K +++ +D + ILSSS+S LPS L H Q
Sbjct: 81 LAEAVEGAVHIQECVPENLELKKKIFAQLDRIVDDRVILSSSSSCLLPSKLFSGLAHVKQ 140
Query: 64 FIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI-H 122
IVAHPVNPPY++PLVE+VP T+ + RT +M +IG PV + EI GF LNR+ +
Sbjct: 141 CIVAHPVNPPYYVPLVELVPHPETAPATMDRTYALMKKIGQSPVRVLKEIDGFVLNRLQY 200
Query: 123 GLIGQAWAMI 132
+I +AW ++
Sbjct: 201 AVISEAWRLV 210
>sp|Q811X6|CRYL1_RAT Lambda-crystallin homolog OS=Rattus norvegicus GN=Cryl1 PE=2 SV=3
Length = 319
Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/165 (48%), Positives = 108/165 (65%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGL 182
GLIG++WAM+FAS G+KV LYD+ +QI NA +I+ ++ Q G LKGSL E+Q L
Sbjct: 15 GLIGRSWAMLFASGGFKVKLYDIEQQQITNALESIRKEMKSLEQSGSLKGSLGAEQQLSL 74
Query: 183 ISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEH 242
ISG L E +E A+ IQE VPE L++K +++ +D + ILSSS+S LPS L
Sbjct: 75 ISGCGNLAEAVEGAMHIQECVPENLELKKKIFAQLDRIVDDQVILSSSSSCLLPSKLFTG 134
Query: 243 STHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEI 287
H Q IVAHPVNPPY++PLVE+VP T+ + RT +M +I
Sbjct: 135 LAHVKQCIVAHPVNPPYYVPLVELVPHPETAPATMDRTYALMKKI 179
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 82/130 (63%), Gaps = 1/130 (0%)
Query: 4 LRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQ 63
L E +E A+ IQE VPE L++K +++ +D + ILSSS+S LPS L H Q
Sbjct: 81 LAEAVEGAMHIQECVPENLELKKKIFAQLDRIVDDQVILSSSSSCLLPSKLFTGLAHVKQ 140
Query: 64 FIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI-H 122
IVAHPVNPPY++PLVE+VP T+ + RT +M +I PV + EI GF LNR+ +
Sbjct: 141 CIVAHPVNPPYYVPLVELVPHPETAPATMDRTYALMKKIRQTPVRVLKEIDGFVLNRLQY 200
Query: 123 GLIGQAWAMI 132
+I +AW ++
Sbjct: 201 AIISEAWRLV 210
>sp|P14755|CRYL1_RABIT Lambda-crystallin OS=Oryctolagus cuniculus GN=CRYL1 PE=1 SV=3
Length = 319
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 104/166 (62%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGL 182
GL+G++WAM+FAS G++V LYD+ QI A I+ ++ Q G LKGSLS EEQ L
Sbjct: 15 GLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSL 74
Query: 183 ISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEH 242
IS L E +E + IQE VPE L +K +++ +D + +LSSS+S LPS L
Sbjct: 75 ISSCTNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTG 134
Query: 243 STHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIG 288
H Q IVAHPVNPPY+IPLVE+VP TS + RT +M +IG
Sbjct: 135 LAHVKQCIVAHPVNPPYYIPLVELVPHPETSPATVDRTHALMRKIG 180
Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 81/130 (62%), Gaps = 1/130 (0%)
Query: 4 LRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQ 63
L E +E + IQE VPE L +K +++ +D + +LSSS+S LPS L H Q
Sbjct: 81 LAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQ 140
Query: 64 FIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI-H 122
IVAHPVNPPY+IPLVE+VP TS + RT +M +IG PV + EI GF LNR+ +
Sbjct: 141 CIVAHPVNPPYYIPLVELVPHPETSPATVDRTHALMRKIGQSPVRVLKEIDGFVLNRLQY 200
Query: 123 GLIGQAWAMI 132
+I +AW ++
Sbjct: 201 AIISEAWRLV 210
>sp|Q8SPX7|CRYL1_BOVIN Lambda-crystallin homolog OS=Bos taurus GN=CRYL1 PE=2 SV=3
Length = 321
Score = 134 bits (338), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 107/166 (64%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGL 182
GLIG++WAM+FASAG++V L+D+ Q+ +A +++ ++ G LKG L EEQ L
Sbjct: 18 GLIGRSWAMLFASAGFRVKLFDIEPRQVTDALVSLRKEMKMLELSGYLKGELGAEEQLSL 77
Query: 183 ISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEH 242
ISG LRE +E A+ +QE VPE L++K +++ +D + ILSSS+S LPS L
Sbjct: 78 ISGCSDLREAVEGALHVQECVPENLELKRKLFAQLDKIADDHVILSSSSSCLLPSKLFAG 137
Query: 243 STHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIG 288
H Q +VAHPVNPPY++PLVE+VP T+ + RT +M +G
Sbjct: 138 LAHVKQCLVAHPVNPPYYVPLVELVPHPETAPATVDRTYALMRRVG 183
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 84/130 (64%), Gaps = 1/130 (0%)
Query: 4 LRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQ 63
LRE +E A+ +QE VPE L++K +++ +D + ILSSS+S LPS L H Q
Sbjct: 84 LREAVEGALHVQECVPENLELKRKLFAQLDKIADDHVILSSSSSCLLPSKLFAGLAHVKQ 143
Query: 64 FIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI-H 122
+VAHPVNPPY++PLVE+VP T+ + RT +M +G PV L EI GFALNR+ +
Sbjct: 144 CLVAHPVNPPYYVPLVELVPHPETAPATVDRTYALMRRVGQSPVRLLREIDGFALNRLQY 203
Query: 123 GLIGQAWAMI 132
+I +AW ++
Sbjct: 204 AVIAEAWRLV 213
>sp|D7URM0|LCDH_PSESP L-carnitine dehydrogenase OS=Pseudomonas sp. GN=lcdH PE=1 SV=1
Length = 321
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 70/118 (59%)
Query: 4 LRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQ 63
+ EC+ DA FIQES PE L +K ++ I + I++SSTS LPS E S+H +
Sbjct: 77 IEECVRDADFIQESAPERLDLKLDLHAKISAAAKPDAIIASSTSGLLPSEFYESSSHPER 136
Query: 64 FIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
+V HP NP Y +PLVEIV T+ I + I TE+GM+P+ + E+ GF +R+
Sbjct: 137 CVVGHPFNPVYLLPLVEIVGGRHTAPEAIEAAKGIYTELGMRPLHVRKEVPGFIADRL 194
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 83/168 (49%), Gaps = 5/168 (2%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGL 182
G+IG W + G V +D + + + + ++G G+ + +
Sbjct: 16 GVIGSGWVARALAHGLDVIAWDPAPGAEQALRQRVANAWPALEKQGLAAGA--AQHRLSF 73
Query: 183 ISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEH 242
+S + EC+ DA FIQES PE L +K ++ I + I++SSTS LPS E
Sbjct: 74 VSS---IEECVRDADFIQESAPERLDLKLDLHAKISAAAKPDAIIASSTSGLLPSEFYES 130
Query: 243 STHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMK 290
S+H + +V HP NP Y +PLVEIV T+ I + I TE+GM+
Sbjct: 131 SSHPERCVVGHPFNPVYLLPLVEIVGGRHTAPEAIEAAKGIYTELGMR 178
>sp|Q8CUW0|LCDH_OCEIH L-carnitine dehydrogenase OS=Oceanobacillus iheyensis (strain DSM
14371 / JCM 11309 / KCTC 3954 / HTE831) GN=lcdH PE=3
SV=1
Length = 307
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 69/118 (58%)
Query: 4 LRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQ 63
+ E ++DA IQESVPE ++KH V + ID F SNTI+ SSTS P+ L H +
Sbjct: 71 IEEAVKDADLIQESVPERYELKHGVLKEIDRFAHSNTIIGSSTSGIKPTDLQIGLNHPER 130
Query: 64 FIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
+VAHP NP Y +PLVEIV T++ + R + MKP+ + EI GF +R+
Sbjct: 131 LVVAHPFNPVYLLPLVEIVGGEATTKEITNRASVYYESLQMKPMVIEKEIEGFVADRL 188
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 82/168 (48%), Gaps = 5/168 (2%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGL 182
G+IG W F + G +V +D E I++ + Q G +G+ F
Sbjct: 10 GVIGNGWITRFLANGCEVVAHDPAPGAKERTIQAIENAWESVEQLGLKEGASKDSLTF-- 67
Query: 183 ISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEH 242
+ E ++DA IQESVPE ++KH V + ID F SNTI+ SSTS P+ L
Sbjct: 68 ---VDSIEEAVKDADLIQESVPERYELKHGVLKEIDRFAHSNTIIGSSTSGIKPTDLQIG 124
Query: 243 STHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMK 290
H + +VAHP NP Y +PLVEIV T++ + R + MK
Sbjct: 125 LNHPERLVVAHPFNPVYLLPLVEIVGGEATTKEITNRASVYYESLQMK 172
>sp|Q92NF5|LCDH_RHIME L-carnitine dehydrogenase OS=Rhizobium meliloti (strain 1021)
GN=lcdH PE=3 SV=1
Length = 496
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 123 GLIGQAWAMIFASAGYKVSLYD-------VLSEQIENAKNTIQHTLQDYHQKGCLKGSLS 175
G+IG AWA FA AG V+++D ++ E + NA+ G L +++
Sbjct: 13 GVIGGAWAARFALAGIDVNIFDPHPEAERIIGEVMANAERAY----------GML--TMA 60
Query: 176 PEEQFGLISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFL 235
P G + ++E +E +IQESVPE L +K V ID + ++ SSTS L
Sbjct: 61 PLPPRGKFTFCRSIQEAVEGVDWIQESVPERLPLKRGVINEIDAAARPDALIGSSTSGLL 120
Query: 236 PSVLSEHSTHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMK 290
PS L H + VAHP NP Y +PLVE+V TS I R E + EIGMK
Sbjct: 121 PSDLQAEMKHPERMFVAHPYNPVYLLPLVELVGGRKTSPETIRRAEEAVAEIGMK 175
Score = 94.7 bits (234), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 65/118 (55%)
Query: 4 LRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQ 63
++E +E +IQESVPE L +K V ID + ++ SSTS LPS L H +
Sbjct: 74 IQEAVEGVDWIQESVPERLPLKRGVINEIDAAARPDALIGSSTSGLLPSDLQAEMKHPER 133
Query: 64 FIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
VAHP NP Y +PLVE+V TS I R E + EIGMK V + EI F +R+
Sbjct: 134 MFVAHPYNPVYLLPLVELVGGRKTSPETIRRAEEAVAEIGMKGVVIAKEIEAFVGDRL 191
>sp|Q88R32|LCDH_PSEPK L-carnitine dehydrogenase OS=Pseudomonas putida (strain KT2440)
GN=lcdH PE=3 SV=1
Length = 321
Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 69/118 (58%)
Query: 4 LRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQ 63
+ EC+ +A FIQES PE L +K ++ I + I+ SSTS LPS E STH +
Sbjct: 77 IEECVRNADFIQESAPERLDLKLDLHAKISAAAKPDAIIGSSTSGLLPSEFYESSTHPER 136
Query: 64 FIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
+V HP NP Y +PLVEIV + TS I + I T +GM+P+ + E+ GF +R+
Sbjct: 137 CVVGHPFNPVYLLPLVEIVGGSRTSPEAIEAAKTIYTALGMRPLHVRKEVPGFIADRL 194
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 86/180 (47%), Gaps = 6/180 (3%)
Query: 111 TEIRGFALNRIHGLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCL 170
TEI+ FA G+IG W + G V +D + + + + ++G
Sbjct: 5 TEIKTFA-ALGSGVIGSGWVARALAHGLDVVAWDPAPGAEQALRKRVANAWPALEKQGLA 63
Query: 171 KGSLSPEEQFGLISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSS 230
G+ +F + EC+ +A FIQES PE L +K ++ I + I+ SS
Sbjct: 64 PGASQDRLKF-----VATIEECVRNADFIQESAPERLDLKLDLHAKISAAAKPDAIIGSS 118
Query: 231 TSSFLPSVLSEHSTHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMK 290
TS LPS E STH + +V HP NP Y +PLVEIV + TS I + I T +GM+
Sbjct: 119 TSGLLPSEFYESSTHPERCVVGHPFNPVYLLPLVEIVGGSRTSPEAIEAAKTIYTALGMR 178
>sp|Q8CQB9|LCDH_STAES L-carnitine dehydrogenase OS=Staphylococcus epidermidis (strain
ATCC 12228) GN=lcdH PE=3 SV=1
Length = 321
Score = 97.8 bits (242), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 70/121 (57%)
Query: 1 TPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTH 60
TP L E ++DA IQE+VPE+ +IK V + ID + + SSTS +PS L + +H
Sbjct: 67 TPHLEEAVKDADHIQENVPEVEEIKDAVLKEIDFYAKPEATIGSSTSGIMPSELQANLSH 126
Query: 61 RSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNR 120
+ +VAHP +P Y +PLVEIVP TSE + +I IGM + + EI G +R
Sbjct: 127 PERLVVAHPFHPVYILPLVEIVPGKQTSEETTVKAEQIYESIGMDVLHVRHEIEGHIADR 186
Query: 121 I 121
+
Sbjct: 187 L 187
Score = 94.4 bits (233), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGL 182
G+IG W + G++V D E ++ Q G L+
Sbjct: 9 GVIGSGWITRMLAHGHEVIATDPSEGAYERMLTQVKQNWPYAEQMG-----LAENASIQN 63
Query: 183 ISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEH 242
++ TP L E ++DA IQE+VPE+ +IK V + ID + + SSTS +PS L +
Sbjct: 64 LTFTPHLEEAVKDADHIQENVPEVEEIKDAVLKEIDFYAKPEATIGSSTSGIMPSELQAN 123
Query: 243 STHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGM 289
+H + +VAHP +P Y +PLVEIVP TSE + +I IGM
Sbjct: 124 LSHPERLVVAHPFHPVYILPLVEIVPGKQTSEETTVKAEQIYESIGM 170
>sp|Q98CR3|LCDH_RHILO L-carnitine dehydrogenase OS=Rhizobium loti (strain MAFF303099)
GN=lcdH PE=3 SV=1
Length = 364
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Query: 6 ECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLS-EHSTHRSQF 64
E + DA FIQESVPE L +KH+V ID +N I+ SSTS P+ + H +
Sbjct: 76 EAVADADFIQESVPERLDLKHRVLAEIDAHAPANAIVGSSTSGIKPTDMQVAMKKHPERL 135
Query: 65 IVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRIHGL 124
+V HP NP Y +PLVEIV T I +EI IGMKPV + EI F +R L
Sbjct: 136 VVGHPFNPVYLLPLVEIVGGDQTFPEAIEVAKEIYASIGMKPVVIRKEIEAFVGDR---L 192
Query: 125 IGQAW 129
+ AW
Sbjct: 193 LEAAW 197
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 77/163 (47%), Gaps = 6/163 (3%)
Query: 129 WAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGLISGTPV 188
W G VS++D E ++ + Y Q + G L E G ++
Sbjct: 19 WVARLLLNGIDVSIFDPDPEASRKVSEVMKGARRAYKQ--MVPGGLPKE---GKLTFAKT 73
Query: 189 LRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLS-EHSTHRS 247
+ E + DA FIQESVPE L +KH+V ID +N I+ SSTS P+ + H
Sbjct: 74 IAEAVADADFIQESVPERLDLKHRVLAEIDAHAPANAIVGSSTSGIKPTDMQVAMKKHPE 133
Query: 248 QFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMK 290
+ +V HP NP Y +PLVEIV T I +EI IGMK
Sbjct: 134 RLVVGHPFNPVYLLPLVEIVGGDQTFPEAIEVAKEIYASIGMK 176
>sp|D7UNT2|LCDH_RHISP L-carnitine dehydrogenase OS=Rhizobium sp. GN=lcdH PE=1 SV=1
Length = 497
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 87/175 (49%), Gaps = 19/175 (10%)
Query: 123 GLIGQAWAMIFASAGYKVSLYD-------VLSEQIENAKNTIQHTLQDYHQKGCLKGSLS 175
G+IG AW FA AG V ++D ++ E + NA+ +++
Sbjct: 13 GVIGGAWVARFALAGIDVKIFDPHPEAERIIGEVMANAERAYAML------------TMA 60
Query: 176 PEEQFGLISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFL 235
P G ++ + E +E A +IQESVPE L++K V ID + ++ SSTS L
Sbjct: 61 PLPPKGKLTFCKSIEEAVEGADWIQESVPERLELKRGVITKIDAAARPDALIGSSTSGLL 120
Query: 236 PSVLSEHSTHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMK 290
PS L H + VAHP NP Y +PLVE+V TS+ I R + + +IGMK
Sbjct: 121 PSDLQSEMHHPERMFVAHPYNPVYLLPLVELVGGKKTSKATIERAMQGVEQIGMK 175
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 67/118 (56%)
Query: 4 LRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQ 63
+ E +E A +IQESVPE L++K V ID + ++ SSTS LPS L H +
Sbjct: 74 IEEAVEGADWIQESVPERLELKRGVITKIDAAARPDALIGSSTSGLLPSDLQSEMHHPER 133
Query: 64 FIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
VAHP NP Y +PLVE+V TS+ I R + + +IGMK V + EI F +R+
Sbjct: 134 MFVAHPYNPVYLLPLVELVGGKKTSKATIERAMQGVEQIGMKGVVIAKEIEAFVGDRL 191
>sp|Q4ZSC0|LCDH_PSEU2 L-carnitine dehydrogenase OS=Pseudomonas syringae pv. syringae
(strain B728a) GN=lcdH PE=3 SV=1
Length = 318
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 68/116 (58%)
Query: 6 ECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFI 65
EC+ DA FIQES PE L++K ++ I SN ++ SSTS LPS + E S H + +
Sbjct: 79 ECVRDADFIQESAPERLELKLDLHSRISAAARSNVLIGSSTSGLLPSDVYESSAHPERCV 138
Query: 66 VAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
V HP NP Y +PLVE+V T+ I ++ +GM+P+ + E+ GF +R+
Sbjct: 139 VGHPFNPVYLLPLVEVVGGKNTAPAAIQAAIKVYESLGMRPLHVRKEVPGFIADRL 194
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 6/184 (3%)
Query: 107 VTLTTEIRGFALNRIHGLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQ 166
++ TEI+ FA G+IG W + G V +D +N + Q
Sbjct: 1 MSFITEIKTFA-ALGSGVIGSGWVSRALAHGLDVVAWDPAPGAEAALRNRVAKCWGALEQ 59
Query: 167 KGCLKGSLSPEEQFGLISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTI 226
+G + G+ +F + EC+ DA FIQES PE L++K ++ I SN +
Sbjct: 60 QGLVPGASQNRLRF-----VATVEECVRDADFIQESAPERLELKLDLHSRISAAARSNVL 114
Query: 227 LSSSTSSFLPSVLSEHSTHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTE 286
+ SSTS LPS + E S H + +V HP NP Y +PLVE+V T+ I ++
Sbjct: 115 IGSSTSGLLPSDVYESSAHPERCVVGHPFNPVYLLPLVEVVGGKNTAPAAIQAAIKVYES 174
Query: 287 IGMK 290
+GM+
Sbjct: 175 LGMR 178
>sp|Q4V182|LCDH_BACCZ L-carnitine dehydrogenase OS=Bacillus cereus (strain ZK / E33L)
GN=lcdH PE=3 SV=1
Length = 326
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 80/168 (47%), Gaps = 5/168 (2%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGL 182
G+IG W F S GY V D + +I++ ++G +G+ F L
Sbjct: 21 GVIGNGWISRFLSQGYDVVATDPAKNAEVRMRQSIENAWPALEKQGLAEGASKDRLTFEL 80
Query: 183 ISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEH 242
L + + DA IQE+VPE +K +V ID F S I++SSTS PS+L E
Sbjct: 81 D-----LAKAVADADLIQENVPEREALKRRVLAEIDHFSKSEAIIASSTSGLKPSILQED 135
Query: 243 STHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMK 290
+ IVAHP NP Y IPLVE++ TS I + + I MK
Sbjct: 136 CQRPERVIVAHPFNPVYLIPLVEVIGGKDTSPETINISEQFYQSIKMK 183
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 67/118 (56%)
Query: 4 LRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQ 63
L + + DA IQE+VPE +K +V ID F S I++SSTS PS+L E +
Sbjct: 82 LAKAVADADLIQENVPEREALKRRVLAEIDHFSKSEAIIASSTSGLKPSILQEDCQRPER 141
Query: 64 FIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
IVAHP NP Y IPLVE++ TS I + + I MKP+ ++TE+ G +R+
Sbjct: 142 VIVAHPFNPVYLIPLVEVIGGKDTSPETINISEQFYQSIKMKPLVISTEVEGHIADRL 199
>sp|Q5LTH8|LCDH_RUEPO L-carnitine dehydrogenase OS=Ruegeria pomeroyi (strain ATCC 700808
/ DSM 15171 / DSS-3) GN=lcdH PE=3 SV=1
Length = 487
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 65/118 (55%)
Query: 4 LRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQ 63
L E + A +IQESVPE L +K +VYR+I IL SSTS F PS L E + Q
Sbjct: 71 LGEAVTGAAWIQESVPERLDLKLKVYRSIQEACDPGAILGSSTSGFKPSELQEGALRPGQ 130
Query: 64 FIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
+V HP NP Y +PL+E+V S +I R +EIM +G P+ + EI +R
Sbjct: 131 IVVTHPFNPVYLLPLIELVTTPENSPEMIERAKEIMRGLGQFPLHVRKEIDAHIADRF 188
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 79/158 (50%), Gaps = 9/158 (5%)
Query: 133 FASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQK--GCLKGSLSPEEQFGLISGTPVLR 190
F G+ V ++D E A+ I L + + G L PE G +S L
Sbjct: 20 FLLNGWDVRVFDPDPE----AERKIGEVLANARRSLPGLSDMPLPPE---GKLSFHADLG 72
Query: 191 ECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFI 250
E + A +IQESVPE L +K +VYR+I IL SSTS F PS L E + Q +
Sbjct: 73 EAVTGAAWIQESVPERLDLKLKVYRSIQEACDPGAILGSSTSGFKPSELQEGALRPGQIV 132
Query: 251 VAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIG 288
V HP NP Y +PL+E+V S +I R +EIM +G
Sbjct: 133 VTHPFNPVYLLPLIELVTTPENSPEMIERAKEIMRGLG 170
>sp|B1VLT7|LCDH_STRGG L-carnitine dehydrogenase OS=Streptomyces griseus subsp. griseus
(strain JCM 4626 / NBRC 13350) GN=lcdH PE=3 SV=1
Length = 335
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGL 182
G+IG WA F + GY V+ +D + + I Q G +G+
Sbjct: 31 GVIGGGWAAHFLARGYDVTAWDPAPDAAVRLRRLIAAAWPALEQLGLAEGASQDR----- 85
Query: 183 ISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEH 242
++ T L E + DA F+QES PE L +K + +D + T+++SSTS + + +
Sbjct: 86 LTVTSTLEEAVADAQFVQESAPEKLDLKRDLLARLDAATPAGTVIASSTSGYPMTDMQTE 145
Query: 243 STHRSQFIVAHPVNPPYFIPLVEIV------PAA--WTS-------ERVITRTREI 283
+ + +V HP NPPY IPLVE+V PAA W + + VIT RE+
Sbjct: 146 AADPGRLVVGHPFNPPYLIPLVEVVGGVRTAPAAVDWAARFYAVAGKSVITMEREV 201
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%)
Query: 1 TPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTH 60
T L E + DA F+QES PE L +K + +D + T+++SSTS + + + +
Sbjct: 89 TSTLEEAVADAQFVQESAPEKLDLKRDLLARLDAATPAGTVIASSTSGYPMTDMQTEAAD 148
Query: 61 RSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNR 120
+ +V HP NPPY IPLVE+V T+ + G +T+ E+ GF NR
Sbjct: 149 PGRLVVGHPFNPPYLIPLVEVVGGVRTAPAAVDWAARFYAVAGKSVITMEREVPGFIANR 208
Query: 121 IH 122
+
Sbjct: 209 LQ 210
>sp|Q9HTH8|LCDH_PSEAE L-carnitine dehydrogenase OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=lcdH PE=1
SV=1
Length = 321
Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 65/118 (55%)
Query: 4 LRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQ 63
+ EC+ DA FIQES PE L +K ++ I + ++ SSTS LPS ++H +
Sbjct: 77 IEECVGDADFIQESAPERLDLKLDLHARISAAARPDVLIGSSTSGLLPSEFYAEASHPER 136
Query: 64 FIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
+V HP NP Y +PLVE+V T+ + + +GM+P+ + E+ GF +R+
Sbjct: 137 CLVGHPFNPVYLLPLVEVVGGERTAAEAVRAAMRVYESLGMRPLHVRKEVPGFIADRL 194
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 83/184 (45%), Gaps = 6/184 (3%)
Query: 107 VTLTTEIRGFALNRIHGLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQ 166
++ TEI+ FA G+IG W + G V +D + + + +
Sbjct: 1 MSFVTEIKTFA-ALGSGVIGSGWIARALAHGLDVVAWDPAPGAEAALRARVANAWPALRK 59
Query: 167 KGCLKGSLSPEEQFGLISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTI 226
+G G+ +F + EC+ DA FIQES PE L +K ++ I + +
Sbjct: 60 QGLAPGAAQERLRF-----VASIEECVGDADFIQESAPERLDLKLDLHARISAAARPDVL 114
Query: 227 LSSSTSSFLPSVLSEHSTHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTE 286
+ SSTS LPS ++H + +V HP NP Y +PLVE+V T+ + +
Sbjct: 115 IGSSTSGLLPSEFYAEASHPERCLVGHPFNPVYLLPLVEVVGGERTAAEAVRAAMRVYES 174
Query: 287 IGMK 290
+GM+
Sbjct: 175 LGMR 178
>sp|Q7D3B2|LCDH_AGRT5 L-carnitine dehydrogenase OS=Agrobacterium tumefaciens (strain C58
/ ATCC 33970) GN=lcdH PE=3 SV=2
Length = 484
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 68/116 (58%), Gaps = 4/116 (3%)
Query: 6 ECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFI 65
E + A +IQESVPE L +KH++ I+ S I++SSTS F PS L E S H + I
Sbjct: 72 EAVAGADYIQESVPERLDLKHRIIAEIEATASPQAIIASSTSGFKPSELREGSVHSERVI 131
Query: 66 VAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
VAHP NP Y +P+VE+V ++ R +I+ +GMKPV + EI +R+
Sbjct: 132 VAHPFNPVYLLPVVEVVGGGVAAQ----RASDILVSVGMKPVQIGREIDAHIGDRL 183
Score = 78.2 bits (191), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 23/165 (13%)
Query: 133 FASAGYKVSLYD-------VLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGLISG 185
F AG+ V+++D +++E + NA Q SP + G I+
Sbjct: 19 FILAGHDVTVFDPHPEANRIVTEVMANAAEAWGRLYQ------------SPLPKPGSINW 66
Query: 186 TPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTH 245
+ E + A +IQESVPE L +KH++ I+ S I++SSTS F PS L E S H
Sbjct: 67 ASSIAEAVAGADYIQESVPERLDLKHRIIAEIEATASPQAIIASSTSGFKPSELREGSVH 126
Query: 246 RSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMK 290
+ IVAHP NP Y +P+VE+V ++ R +I+ +GMK
Sbjct: 127 SERVIVAHPFNPVYLLPVVEVVGGGVAAQ----RASDILVSVGMK 167
>sp|Q93RX5|LCDH_STRCO L-carnitine dehydrogenase OS=Streptomyces coelicolor (strain ATCC
BAA-471 / A3(2) / M145) GN=lcdH PE=3 SV=1
Length = 318
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 5/145 (3%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGL 182
G+IG W F + GY+V+ +D + + ++ + G +G+ +
Sbjct: 16 GVIGGGWVAHFLARGYEVTAWDPAPDAEPRLRRLVEAAWPTLTRLGLAEGASTDR----- 70
Query: 183 ISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEH 242
++ T L + + DA F+QES PE L +K + +D +++SSTS + + +
Sbjct: 71 LTVTDTLEQAVADAEFVQESAPEKLDLKRDLLARLDAATPPGVVIASSTSGYPMTDMQTT 130
Query: 243 STHRSQFIVAHPVNPPYFIPLVEIV 267
+ S+ +V HP NPPY IPLVE+V
Sbjct: 131 AADPSRLVVGHPFNPPYLIPLVEVV 155
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%)
Query: 1 TPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTH 60
T L + + DA F+QES PE L +K + +D +++SSTS + + + +
Sbjct: 74 TDTLEQAVADAEFVQESAPEKLDLKRDLLARLDAATPPGVVIASSTSGYPMTDMQTTAAD 133
Query: 61 RSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNR 120
S+ +V HP NPPY IPLVE+V T+ + G +T+ E+ GF NR
Sbjct: 134 PSRLVVGHPFNPPYLIPLVEVVGGERTAAAAVAWASRFYEVAGKSVITMDNEVPGFIANR 193
Query: 121 IH 122
+
Sbjct: 194 LQ 195
>sp|Q63MT0|LCDH_BURPS L-carnitine dehydrogenase OS=Burkholderia pseudomallei (strain
K96243) GN=lcdH PE=3 SV=1
Length = 321
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 64/120 (53%)
Query: 2 PVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHR 61
P + C+ DA F+QES PE +K +++ I + I++SSTS LP+ +
Sbjct: 75 PTIEACVADADFVQESAPEREALKLELHERISRAAKPDAIIASSTSGLLPTDFYARAHRP 134
Query: 62 SQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
+ IV HP NP Y +PLVE++ T+ + I +GM+P+ + E+ GF +R+
Sbjct: 135 ERCIVGHPFNPVYLLPLVEVLGGERTAPDTVDAALGIYRALGMRPLRVRKEVPGFIADRL 194
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGL 182
G+IG W + G V +D + +++ + G G+ F
Sbjct: 16 GVIGSGWVARALANGLDVLAWDPAEGAEMQLRANVENAWPALERAGLAPGASPARLHF-- 73
Query: 183 ISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEH 242
P + C+ DA F+QES PE +K +++ I + I++SSTS LP+
Sbjct: 74 ---VPTIEACVADADFVQESAPEREALKLELHERISRAAKPDAIIASSTSGLLPTDFYAR 130
Query: 243 STHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMK 290
+ + IV HP NP Y +PLVE++ T+ + I +GM+
Sbjct: 131 AHRPERCIVGHPFNPVYLLPLVEVLGGERTAPDTVDAALGIYRALGMR 178
>sp|Q62DG4|LCDH_BURMA L-carnitine dehydrogenase OS=Burkholderia mallei (strain ATCC
23344) GN=lcdH PE=3 SV=2
Length = 321
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 64/120 (53%)
Query: 2 PVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHR 61
P + C+ DA F+QES PE +K +++ I + I++SSTS LP+ +
Sbjct: 75 PTIEACVADADFVQESAPEREALKLELHERISRAAKPDAIIASSTSGLLPTDFYARAHRP 134
Query: 62 SQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
+ IV HP NP Y +PLVE++ T+ + I +GM+P+ + E+ GF +R+
Sbjct: 135 ERCIVGHPFNPVYLLPLVEVLGGERTAPDTVDAALGIYRALGMRPLRVRKEVPGFIADRL 194
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 5/168 (2%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGL 182
G+IG W + G V +D + + +++ + G G+ F
Sbjct: 16 GVIGSGWVARALANGLDVLAWDPAEDAEMQLRANVENAWPALERAGLAPGASPARLHF-- 73
Query: 183 ISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEH 242
P + C+ DA F+QES PE +K +++ I + I++SSTS LP+
Sbjct: 74 ---VPTIEACVADADFVQESAPEREALKLELHERISRAAKPDAIIASSTSGLLPTDFYAR 130
Query: 243 STHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMK 290
+ + IV HP NP Y +PLVE++ T+ + I +GM+
Sbjct: 131 AHRPERCIVGHPFNPVYLLPLVEVLGGERTAPDTVDAALGIYRALGMR 178
>sp|D7B2S5|LCDH_NOCDD L-carnitine dehydrogenase OS=Nocardiopsis dassonvillei (strain ATCC
23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488)
GN=lcdH PE=3 SV=1
Length = 329
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 20/183 (10%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGL 182
G+IG W F GY+V +D + + + + G +G+
Sbjct: 21 GVIGGGWVAHFLGRGYRVVAWDPAPDAESRLRGLVSSAWPALEELGPAEGA-----SMAN 75
Query: 183 ISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEH 242
+ L E + DA F+QES PE L +K + ID +++SSTS + S +
Sbjct: 76 LRVVDTLAEAVADADFVQESAPERLDLKIDLLAEIDAATPEGVVIASSTSGYSMSEMQVG 135
Query: 243 STHRSQFIVAHPVNPPYFIPLVEIVPAA--------WTSE-------RVITRTREIMTEI 287
+ + +V HP NPPY +PLVE+V W S+ VIT RE+ I
Sbjct: 136 ARTPGRLVVGHPFNPPYLVPLVEVVGGERSERWAVDWASDFYRAAGKSVITMERELPGFI 195
Query: 288 GMK 290
G +
Sbjct: 196 GNR 198
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 59/119 (49%)
Query: 4 LRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQ 63
L E + DA F+QES PE L +K + ID +++SSTS + S + + +
Sbjct: 82 LAEAVADADFVQESAPERLDLKIDLLAEIDAATPEGVVIASSTSGYSMSEMQVGARTPGR 141
Query: 64 FIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRIH 122
+V HP NPPY +PLVE+V + + + G +T+ E+ GF NRI
Sbjct: 142 LVVGHPFNPPYLVPLVEVVGGERSERWAVDWASDFYRAAGKSVITMERELPGFIGNRIQ 200
>sp|Q9RVG1|HBD_DEIRA Probable 3-hydroxybutyryl-CoA dehydrogenase OS=Deinococcus
radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 /
LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
GN=hbd PE=3 SV=1
Length = 278
Score = 74.3 bits (181), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 6/163 (3%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGL 182
G +G A + A +G+ V ++D E ++ K I+ +L H+KG L + +PE G
Sbjct: 9 GQMGGGIAQVAAQSGFDVVVHDQKQEFLDRGKGVIEKSLGKLHEKGKL--TDAPETVLGR 66
Query: 183 ISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEH 242
I T L++ D + E++ E QIK+ +++ + + IL+S+TSS + L+
Sbjct: 67 IHFTTDLQD-FADCDLVVEAIVENQQIKNDLFKQLGQIVKPEGILASNTSSIPITALATA 125
Query: 243 STHRSQFIVAHPVNPPYFIPLVEIVPAAWTSE---RVITRTRE 282
S +QFI H +NP + LVE++ TS+ R++T T E
Sbjct: 126 SGRPAQFIGMHFMNPVPLMQLVEVIRGYQTSDETARIVTETAE 168
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 10 DAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHP 69
D + E++ E QIK+ +++ + + IL+S+TSS + L+ S +QFI H
Sbjct: 78 DCDLVVEAIVENQQIKNDLFKQLGQIVKPEGILASNTSSIPITALATASGRPAQFIGMHF 137
Query: 70 VNPPYFIPLVEIVPAAWTSE---RVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
+NP + LVE++ TS+ R++T T E ++G P++ + GF NRI
Sbjct: 138 MNPVPLMQLVEVIRGYQTSDETARIVTETAE---KLGKTPLS-CNDFPGFVSNRI 188
>sp|P77851|HBD_THETC 3-hydroxybutyryl-CoA dehydrogenase OS=Thermoanaerobacterium
thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB
9385 / NCA 3814) GN=hbd PE=3 SV=2
Length = 281
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 8/168 (4%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGL 182
G +G A +FA G++V L D+ + +E TI+ LQ + KG ++ +E+ +
Sbjct: 10 GTMGSGIAQVFAQNGFEVILRDIDMKFVEKGFGTIEKNLQ----RNVDKGKITADEKNEI 65
Query: 183 IS---GTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVL 239
+S GT L + E A F+ E+ E + +K Q+++ +D TIL+S+TSS + +
Sbjct: 66 LSRIRGTTNLEDAKE-ADFVVEAAIENMDLKKQIFKELDEICKMETILASNTSSLSITEI 124
Query: 240 SEHSTHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEI 287
+ + + I H NP + LVE++ TSE+ RE+ ++
Sbjct: 125 ASATKRPEKVIGMHFFNPVPVMKLVEVIKGLKTSEQTFNVVRELALKV 172
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 6 ECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFI 65
E ++A F+ E+ E + +K Q+++ +D TIL+S+TSS + ++ + + I
Sbjct: 76 EDAKEADFVVEAAIENMDLKKQIFKELDEICKMETILASNTSSLSITEIASATKRPEKVI 135
Query: 66 VAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
H NP + LVE++ TSE+ RE+ ++ P+ + E GF +NRI
Sbjct: 136 GMHFFNPVPVMKLVEVIKGLKTSEQTFNVVRELALKVDKTPIEV-KEAPGFVVNRI 190
>sp|Q68WH7|FAD3_RICTY Putative fatty acid oxidation complex trifunctional enzyme
OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington)
GN=RT0547 PE=3 SV=1
Length = 720
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 88/167 (52%), Gaps = 2/167 (1%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGL 182
G++G A + A++ ++V L D+L + + +++ +++ H++ S + F
Sbjct: 14 GVMGSGIAALIANSSHRVVLLDILDKDSNDPNKIVKNAVKNLHRQKLPPLSYPDKVNFIT 73
Query: 183 ISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEH 242
I + +++ + E + E L IKHQ+Y I ++ +TI++S+TS+ L E+
Sbjct: 74 IGNLEHDLDLIKECNLVIEVIVEKLDIKHQLYNKIIPYLKEDTIIASNTSTLPLKKLKEN 133
Query: 243 --STHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEI 287
+ +S+FI+ H NPP ++ LVE++ + VI + +T+I
Sbjct: 134 LPNNIKSRFIITHFFNPPRYMELVELIIDNTIKDEVIEKISVFLTKI 180
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 66/121 (54%), Gaps = 6/121 (4%)
Query: 3 VLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEH--STH 60
+++EC + E + E L IKHQ+Y I ++ +TI++S+TS+ L E+ +
Sbjct: 83 LIKEC----NLVIEVIVEKLDIKHQLYNKIIPYLKEDTIIASNTSTLPLKKLKENLPNNI 138
Query: 61 RSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNR 120
+S+FI+ H NPP ++ LVE++ + VI + +T+I K + + GF NR
Sbjct: 139 KSRFIITHFFNPPRYMELVELIIDNTIKDEVIEKISVFLTKILGKTIIKCNDTPGFIANR 198
Query: 121 I 121
+
Sbjct: 199 V 199
>sp|Q4UL32|FAD3_RICFE Putative fatty acid oxidation complex trifunctional enzyme
OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
GN=RF_0890 PE=3 SV=1
Length = 720
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGL 182
G++G A + A++ +KV L D++++ ++ ++ ++ H++ S + F
Sbjct: 14 GVMGSGIAALIANSSHKVVLLDIIAKDSDDPNKIVKTAKENLHKQKPPPLSFPDKVNFIT 73
Query: 183 ISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEH 242
I E + D + E + E L+IKHQ+Y I ++ + I++S+TS+ L E+
Sbjct: 74 IGNLEHDLELIRDCDLVIEVIVEKLEIKHQLYNKIIPYLKEDAIIASNTSTLPLKRLKEN 133
Query: 243 --STHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTE 286
+S+F++ H NPP ++ L+E++ + VI R +T+
Sbjct: 134 LPDNIKSRFVITHFFNPPRYMELLELIIDSMVKFEVIERVSGFLTK 179
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
Query: 6 ECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEH--STHRSQ 63
E + D + E + E L+IKHQ+Y I ++ + I++S+TS+ L E+ +S+
Sbjct: 82 ELIRDCDLVIEVIVEKLEIKHQLYNKIIPYLKEDAIIASNTSTLPLKRLKENLPDNIKSR 141
Query: 64 FIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
F++ H NPP ++ L+E++ + VI R +T+ K + + GF NR+
Sbjct: 142 FVITHFFNPPRYMELLELIIDSMVKFEVIERVSGFLTKTLGKTIVKCNDTPGFIANRV 199
>sp|Q9ZCZ1|FAD3_RICPR Putative fatty acid oxidation complex trifunctional enzyme
OS=Rickettsia prowazekii (strain Madrid E) GN=RP560 PE=3
SV=1
Length = 720
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 88/167 (52%), Gaps = 2/167 (1%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGL 182
G++G A + A++ ++V L D+L + + +++++++ H++ S + F
Sbjct: 14 GVMGSGIAALIANSSHQVVLLDILDKDSNDPNKIVKNSVKNLHKQKLSPLSFPDKVNFIT 73
Query: 183 ISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEH 242
I + +++ + E + E L+IKHQ+Y I ++ + I++S+TS+ L +
Sbjct: 74 IGNLEHDLDLIKECNLVIEVIVEKLEIKHQLYNKIIPYLKEDAIIASNTSTLPLKKLKVN 133
Query: 243 --STHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEI 287
+ +S+F++ H NPP ++ LVE++ + VI + +T++
Sbjct: 134 LPNNIKSRFVITHFFNPPRYMELVELIIDHTIKDEVIEKVSVFLTKM 180
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Query: 3 VLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEH--STH 60
+++EC + E + E L+IKHQ+Y I ++ + I++S+TS+ L + +
Sbjct: 83 LIKEC----NLVIEVIVEKLEIKHQLYNKIIPYLKEDAIIASNTSTLPLKKLKVNLPNNI 138
Query: 61 RSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNR 120
+S+F++ H NPP ++ LVE++ + VI + +T++ K + + GF NR
Sbjct: 139 KSRFVITHFFNPPRYMELVELIIDHTIKDEVIEKVSVFLTKMLGKTIIKCNDTPGFIANR 198
Query: 121 I 121
+
Sbjct: 199 V 199
>sp|P00348|HCDH_PIG Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Sus scrofa
GN=HADH PE=1 SV=2
Length = 314
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 80/159 (50%), Gaps = 4/159 (2%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLK----GSLSPEE 178
GL+G A + A+ G+ V L D + + +K I+ +L+ +K + G E+
Sbjct: 36 GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEK 95
Query: 179 QFGLISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSV 238
IS + + + E++ E L++K ++++ +D F + +TI +S+TSS +
Sbjct: 96 TLSSISTSTDAASVVHSTDLVVEAIVENLKVKSELFKRLDKFAAEHTIFASNTSSLQITS 155
Query: 239 LSEHSTHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVI 277
L+ +T + +F H NP + LVE+V TS++ +
Sbjct: 156 LANATTRQDRFAGLHFFNPVPLMKLVEVVKTPMTSQKTL 194
Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Query: 13 FIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHPVNP 72
+ E++ E L++K ++++ +D F + +TI +S+TSS + L+ +T + +F H NP
Sbjct: 115 LVVEAIVENLKVKSELFKRLDKFAAEHTIFASNTSSLQITSLANATTRQDRFAGLHFFNP 174
Query: 73 PYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
+ LVE+V TS++ + + +G PV+ + GF +NR+
Sbjct: 175 VPLMKLVEVVKTPMTSQKTLESLVDFSKTLGKHPVS-CKDTPGFIVNRL 222
>sp|P52041|HBD_CLOAB 3-hydroxybutyryl-CoA dehydrogenase OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=hbd PE=3 SV=2
Length = 282
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 2/166 (1%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGL 182
G +G A FA+ G++V L D+ E ++ + I L +KG ++ + E
Sbjct: 10 GTMGSGIAQAFAAKGFEVVLRDIKDEFVDRGLDFINKNLSKLVKKGKIE-EATKVEILTR 68
Query: 183 ISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEH 242
ISGT L + + I+ +V E + IK Q++ +D TIL+S+TSS + ++
Sbjct: 69 ISGTVDLNMAADCDLVIEAAV-ERMDIKKQIFADLDNICKPETILASNTSSLSITEVASA 127
Query: 243 STHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIG 288
+ + I H NP + LVE++ TS+ +E IG
Sbjct: 128 TKRPDKVIGMHFFNPAPVMKLVEVIRGIATSQETFDAVKETSIAIG 173
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 10 DAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHP 69
D + E+ E + IK Q++ +D TIL+S+TSS + ++ + + I H
Sbjct: 80 DCDLVIEAAVERMDIKKQIFADLDNICKPETILASNTSSLSITEVASATKRPDKVIGMHF 139
Query: 70 VNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
NP + LVE++ TS+ +E IG PV + E GF +NRI
Sbjct: 140 FNPAPVMKLVEVIRGIATSQETFDAVKETSIAIGKDPVEV-AEAPGFVVNRI 190
>sp|A8A2L0|FADJ_ECOHS Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O9:H4 (strain HS) GN=fadJ PE=3 SV=1
Length = 714
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 3/167 (1%)
Query: 123 GLIGQAWAMIFA-SAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFG 181
GL+G A + A AG V + D+ + I +A L+ ++ LK S ++Q
Sbjct: 317 GLMGAGIAYVTACKAGLPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKAS-ERDKQLA 375
Query: 182 LISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSE 241
LISGT R + I E+V E L++K Q+ ++ +++TI +S+TSS ++
Sbjct: 376 LISGTTDYRGFAHRDLII-EAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAA 434
Query: 242 HSTHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIG 288
H+ Q I H +P +PLVEI+P A TS + I T ++ + G
Sbjct: 435 HAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQG 481
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Query: 13 FIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHPVNP 72
I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+ Q I H +P
Sbjct: 391 LIIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSP 450
Query: 73 PYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
+PLVEI+P A TS + I T ++ + G P+ + + GF +NRI
Sbjct: 451 VEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKA-GFYVNRI 498
>sp|Q92HC9|Y842_RICCN Putative uncharacterized protein RC0842 OS=Rickettsia conorii
(strain ATCC VR-613 / Malish 7) GN=RC0842 PE=5 SV=1
Length = 154
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLS-PEE-QF 180
G+IG A + A++ YKV L D++++ ++ + ++ H++ LS P++ F
Sbjct: 14 GVIGSGIAALIANSSYKVVLLDIIAKDSDDPNKIVNTAKENLHKQKPPPPPLSFPDKANF 73
Query: 181 GLISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLS 240
I + +++ + E + E L+IKHQ+Y I ++ + I++S+TS+ L
Sbjct: 74 ITIGNLEYDLDLIKECDLVIEVIVEKLEIKHQLYNKIIPYLKEDAIIASNTSTLPLERLK 133
Query: 241 EH--STHRSQFIVAHPVNPP 258
E+ +S+F++ H NPP
Sbjct: 134 ENLPDNIKSRFVITHFFNPP 153
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
Query: 3 VLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEH--STH 60
+++EC + E + E L+IKHQ+Y I ++ + I++S+TS+ L E+
Sbjct: 85 LIKEC----DLVIEVIVEKLEIKHQLYNKIIPYLKEDAIIASNTSTLPLERLKENLPDNI 140
Query: 61 RSQFIVAHPVNPP 73
+S+F++ H NPP
Sbjct: 141 KSRFVITHFFNPP 153
>sp|Q9ZPI6|AIM1_ARATH Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1
OS=Arabidopsis thaliana GN=AIM1 PE=1 SV=1
Length = 721
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 8 LEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVA 67
D + E+V E +Q+K +++ I+ S + IL+S+TS+ V+ E + + + + A
Sbjct: 386 FNDVDMVIEAVIENIQLKQNIFKEIEKVCSPHCILASNTSTIDLDVIGEKTNSKDRIVGA 445
Query: 68 HPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNR 120
H +P + +PL+EIV + TS +VI + I PV + I GFA+NR
Sbjct: 446 HFFSPAHLMPLLEIVRSKNTSAQVILDLMAVGKAIKKVPVVVGNCI-GFAVNR 497
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 87/181 (48%), Gaps = 11/181 (6%)
Query: 99 MTEIGMKP--VTLTTEIRGFALNRIHGLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNT 156
+T++G+KP + I G GL+G A + +V L ++ SE + +
Sbjct: 299 VTDVGLKPRPIKKVAVIGG-------GLMGSGIATALLLSNIRVVLKEINSEFLMKGIKS 351
Query: 157 IQHTLQDYHQKGCLKGSLSPEEQFGLISGTPVLRECLEDAIFIQESVPEILQIKHQVYRA 216
++ ++ +G L + L G E D + E+V E +Q+K +++
Sbjct: 352 VEANMKSLVSRGKLTQD-KAGKALSLFKGVLDYTE-FNDVDMVIEAVIENIQLKQNIFKE 409
Query: 217 IDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERV 276
I+ S + IL+S+TS+ V+ E + + + + AH +P + +PL+EIV + TS +V
Sbjct: 410 IEKVCSPHCILASNTSTIDLDVIGEKTNSKDRIVGAHFFSPAHLMPLLEIVRSKNTSAQV 469
Query: 277 I 277
I
Sbjct: 470 I 470
>sp|Q16836|HCDH_HUMAN Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Homo sapiens
GN=HADH PE=1 SV=3
Length = 314
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 79/157 (50%), Gaps = 4/157 (2%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQK----GCLKGSLSPEE 178
GL+G A + A+ G+ V L D + + +K I+ +L+ +K G E+
Sbjct: 36 GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENLKAGDEFVEK 95
Query: 179 QFGLISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSV 238
I+ + + + E++ E L++K+++++ +D F + +TI +S+TSS +
Sbjct: 96 TLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITS 155
Query: 239 LSEHSTHRSQFIVAHPVNPPYFIPLVEIVPAAWTSER 275
++ +T + +F H NP + LVE++ TS++
Sbjct: 156 IANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQK 192
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Query: 13 FIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHPVNP 72
+ E++ E L++K+++++ +D F + +TI +S+TSS + ++ +T + +F H NP
Sbjct: 115 LVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNP 174
Query: 73 PYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
+ LVE++ TS++ + +G PV+ + GF +NR+
Sbjct: 175 VPVMKLVEVIKTPMTSQKTFESLVDFSKALGKHPVS-CKDTPGFIVNRL 222
>sp|Q61425|HCDH_MOUSE Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Mus musculus
GN=Hadh PE=1 SV=2
Length = 314
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 83/170 (48%), Gaps = 4/170 (2%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLK----GSLSPEE 178
GL+G A + A+ G+ V L D + + +K I+ +L+ +K + G E+
Sbjct: 36 GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLKRMAKKKFTENPKAGDEFVEK 95
Query: 179 QFGLISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSV 238
+S + + + E++ E L++K+++++ +D F + +TI +S+TSS +
Sbjct: 96 TLSCLSTSTDAASVVHSTDLVVEAIVENLKLKNELFQRLDKFAAEHTIFASNTSSLQITN 155
Query: 239 LSEHSTHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIG 288
++ +T + +F H NP + LVE++ TS++ + +G
Sbjct: 156 IANATTRQDRFAGLHFFNPVPMMKLVEVIKTPMTSQKTFESLVDFCKTLG 205
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Query: 13 FIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHPVNP 72
+ E++ E L++K+++++ +D F + +TI +S+TSS + ++ +T + +F H NP
Sbjct: 115 LVVEAIVENLKLKNELFQRLDKFAAEHTIFASNTSSLQITNIANATTRQDRFAGLHFFNP 174
Query: 73 PYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
+ LVE++ TS++ + +G PV+ + GF +NR+
Sbjct: 175 VPMMKLVEVIKTPMTSQKTFESLVDFCKTLGKHPVS-CKDTPGFIVNRL 222
>sp|Q32DJ4|FADJ_SHIDS Fatty acid oxidation complex subunit alpha OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=fadJ PE=3 SV=1
Length = 714
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Query: 135 SAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGLISGTPVLRECLE 194
AG V + D+ + I +A L+ ++ LK S ++Q LISGT R
Sbjct: 330 KAGLPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKAS-ERDKQLALISGTTDYRGFAH 388
Query: 195 DAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHP 254
+ I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+T Q I H
Sbjct: 389 RDLII-EAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHF 447
Query: 255 VNPPYFIPLVEIVPAAWTSERVITRTREIMTEIG 288
+P +PLVEI+P A TS + I T ++ + G
Sbjct: 448 FSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQG 481
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Query: 13 FIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHPVNP 72
I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+T Q I H +P
Sbjct: 391 LIIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSP 450
Query: 73 PYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
+PLVEI+P A TS + I T ++ + G P+ + + GF +NRI
Sbjct: 451 VEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKA-GFYVNRI 498
>sp|B1IXA5|FADJ_ECOLC Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain ATCC 8739 / DSM 1576 / Crooks) GN=fadJ PE=3 SV=1
Length = 714
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Query: 135 SAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGLISGTPVLRECLE 194
AG V + D+ + I +A L+ ++ LK S ++Q LISGT R
Sbjct: 330 KAGLPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKAS-ERDKQLALISGTTDYRGFAH 388
Query: 195 DAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHP 254
+ I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+T Q I H
Sbjct: 389 RDLII-EAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHF 447
Query: 255 VNPPYFIPLVEIVPAAWTSERVITRTREIMTEIG 288
+P +PLVEI+P A TS + I T ++ + G
Sbjct: 448 FSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQG 481
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Query: 13 FIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHPVNP 72
I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+T Q I H +P
Sbjct: 391 LIIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSP 450
Query: 73 PYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
+PLVEI+P A TS + I T ++ + G P+ + + GF +NRI
Sbjct: 451 VEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKA-GFYVNRI 498
>sp|Q31YB7|FADJ_SHIBS Fatty acid oxidation complex subunit alpha OS=Shigella boydii
serotype 4 (strain Sb227) GN=fadJ PE=3 SV=1
Length = 714
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Query: 135 SAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGLISGTPVLRECLE 194
AG V + D+ + I +A L+ ++ LK S ++Q LISGT R
Sbjct: 330 KAGLPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKAS-ERDKQLALISGTTDYRGFAH 388
Query: 195 DAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHP 254
+ I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+T Q I H
Sbjct: 389 RDLII-EAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHF 447
Query: 255 VNPPYFIPLVEIVPAAWTSERVITRTREIMTEIG 288
+P +PLVEI+P A TS + I T ++ + G
Sbjct: 448 FSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQG 481
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Query: 13 FIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHPVNP 72
I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+T Q I H +P
Sbjct: 391 LIIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSP 450
Query: 73 PYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
+PLVEI+P A TS + I T ++ + G P+ + + GF +NRI
Sbjct: 451 VEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKA-GFYVNRI 498
>sp|B2TWV4|FADJ_SHIB3 Fatty acid oxidation complex subunit alpha OS=Shigella boydii
serotype 18 (strain CDC 3083-94 / BS512) GN=fadJ PE=3
SV=1
Length = 714
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Query: 135 SAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGLISGTPVLRECLE 194
AG V + D+ + I +A L+ ++ LK S ++Q LISGT R
Sbjct: 330 KAGLPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKAS-ERDKQLALISGTTDYRGFAH 388
Query: 195 DAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHP 254
+ I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+T Q I H
Sbjct: 389 RDLII-EAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHF 447
Query: 255 VNPPYFIPLVEIVPAAWTSERVITRTREIMTEIG 288
+P +PLVEI+P A TS + I T ++ + G
Sbjct: 448 FSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQG 481
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Query: 13 FIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHPVNP 72
I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+T Q I H +P
Sbjct: 391 LIIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSP 450
Query: 73 PYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
+PLVEI+P A TS + I T ++ + G P+ + + GF +NRI
Sbjct: 451 VEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKA-GFYVNRI 498
>sp|B6I6Q4|FADJ_ECOSE Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain SE11) GN=fadJ PE=3 SV=1
Length = 714
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Query: 135 SAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGLISGTPVLRECLE 194
AG V + D+ + I +A L+ ++ LK S ++Q LISGT R
Sbjct: 330 KAGLPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKAS-ERDKQLALISGTTDYRGFAH 388
Query: 195 DAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHP 254
+ I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+T Q I H
Sbjct: 389 RDLII-EAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHF 447
Query: 255 VNPPYFIPLVEIVPAAWTSERVITRTREIMTEIG 288
+P +PLVEI+P A TS + I T ++ + G
Sbjct: 448 FSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQG 481
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Query: 13 FIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHPVNP 72
I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+T Q I H +P
Sbjct: 391 LIIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSP 450
Query: 73 PYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
+PLVEI+P A TS + I T ++ + G P+ + + GF +NRI
Sbjct: 451 VEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKA-GFYVNRI 498
>sp|A7ZPF8|FADJ_ECO24 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O139:H28 (strain E24377A / ETEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Query: 135 SAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGLISGTPVLRECLE 194
AG V + D+ + I +A L+ ++ LK S ++Q LISGT R
Sbjct: 330 KAGLPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKAS-ERDKQLALISGTTDYRGFAH 388
Query: 195 DAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHP 254
+ I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+T Q I H
Sbjct: 389 RDLII-EAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHF 447
Query: 255 VNPPYFIPLVEIVPAAWTSERVITRTREIMTEIG 288
+P +PLVEI+P A TS + I T ++ + G
Sbjct: 448 FSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQG 481
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Query: 13 FIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHPVNP 72
I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+T Q I H +P
Sbjct: 391 LIIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSP 450
Query: 73 PYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
+PLVEI+P A TS + I T ++ + G P+ + + GF +NRI
Sbjct: 451 VEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKA-GFYVNRI 498
>sp|P77399|FADJ_ECOLI Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain K12) GN=fadJ PE=1 SV=1
Length = 714
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Query: 135 SAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGLISGTPVLRECLE 194
AG V + D+ + I +A L+ ++ LK S ++Q LISGT R
Sbjct: 330 KAGIPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKAS-ERDKQLALISGTTDYRGFAH 388
Query: 195 DAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHP 254
+ I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+T Q I H
Sbjct: 389 RDLII-EAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHF 447
Query: 255 VNPPYFIPLVEIVPAAWTSERVITRTREIMTEIG 288
+P +PLVEI+P A TS + I T ++ + G
Sbjct: 448 FSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQG 481
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Query: 13 FIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHPVNP 72
I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+T Q I H +P
Sbjct: 391 LIIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSP 450
Query: 73 PYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
+PLVEI+P A TS + I T ++ + G P+ + + GF +NRI
Sbjct: 451 VEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKA-GFYVNRI 498
>sp|B1X9L4|FADJ_ECODH Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain K12 / DH10B) GN=fadJ PE=3 SV=1
Length = 714
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Query: 135 SAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGLISGTPVLRECLE 194
AG V + D+ + I +A L+ ++ LK S ++Q LISGT R
Sbjct: 330 KAGIPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKAS-ERDKQLALISGTTDYRGFAH 388
Query: 195 DAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHP 254
+ I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+T Q I H
Sbjct: 389 RDLII-EAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHF 447
Query: 255 VNPPYFIPLVEIVPAAWTSERVITRTREIMTEIG 288
+P +PLVEI+P A TS + I T ++ + G
Sbjct: 448 FSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQG 481
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Query: 13 FIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHPVNP 72
I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+T Q I H +P
Sbjct: 391 LIIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSP 450
Query: 73 PYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
+PLVEI+P A TS + I T ++ + G P+ + + GF +NRI
Sbjct: 451 VEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKA-GFYVNRI 498
>sp|C4ZVN2|FADJ_ECOBW Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain K12 / MC4100 / BW2952) GN=fadJ PE=3 SV=1
Length = 714
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Query: 135 SAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGLISGTPVLRECLE 194
AG V + D+ + I +A L+ ++ LK S ++Q LISGT R
Sbjct: 330 KAGIPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKAS-ERDKQLALISGTTDYRGFAH 388
Query: 195 DAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHP 254
+ I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+T Q I H
Sbjct: 389 RDLII-EAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHF 447
Query: 255 VNPPYFIPLVEIVPAAWTSERVITRTREIMTEIG 288
+P +PLVEI+P A TS + I T ++ + G
Sbjct: 448 FSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQG 481
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Query: 13 FIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHPVNP 72
I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+T Q I H +P
Sbjct: 391 LIIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSP 450
Query: 73 PYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
+PLVEI+P A TS + I T ++ + G P+ + + GF +NRI
Sbjct: 451 VEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKA-GFYVNRI 498
>sp|B5YXY4|FADJ_ECO5E Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O157:H7 (strain EC4115 / EHEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Query: 135 SAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGLISGTPVLRECLE 194
AG V + D+ + I +A L+ ++ LK S ++Q LISGT R
Sbjct: 330 KAGIPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKAS-ERDKQLALISGTTDYRGFAH 388
Query: 195 DAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHP 254
+ I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+T Q I H
Sbjct: 389 RDLII-EAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHF 447
Query: 255 VNPPYFIPLVEIVPAAWTSERVITRTREIMTEIG 288
+P +PLVEI+P A TS + I T ++ + G
Sbjct: 448 FSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQG 481
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Query: 13 FIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHPVNP 72
I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+T Q I H +P
Sbjct: 391 LIIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSP 450
Query: 73 PYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
+PLVEI+P A TS + I T ++ + G P+ + + GF +NRI
Sbjct: 451 VEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKA-GFYVNRI 498
>sp|Q8XCP2|FADJ_ECO57 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O157:H7 GN=fadJ PE=3 SV=1
Length = 714
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Query: 135 SAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGLISGTPVLRECLE 194
AG V + D+ + I +A L+ ++ LK S ++Q LISGT R
Sbjct: 330 KAGIPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKAS-ERDKQLALISGTTDYRGFAH 388
Query: 195 DAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHP 254
+ I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+T Q I H
Sbjct: 389 RDLII-EAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHF 447
Query: 255 VNPPYFIPLVEIVPAAWTSERVITRTREIMTEIG 288
+P +PLVEI+P A TS + I T ++ + G
Sbjct: 448 FSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQG 481
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Query: 13 FIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHPVNP 72
I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+T Q I H +P
Sbjct: 391 LIIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSP 450
Query: 73 PYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
+PLVEI+P A TS + I T ++ + G P+ + + GF +NRI
Sbjct: 451 VEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKA-GFYVNRI 498
>sp|B7N5V2|FADJ_ECOLU Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 2/154 (1%)
Query: 135 SAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGLISGTPVLRECLE 194
AG V + D+ + I +A L+ ++ LK S + Q LISGT R
Sbjct: 330 KAGLPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKAS-ERDRQLALISGTTDYRGFAH 388
Query: 195 DAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHP 254
+ I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+T Q I H
Sbjct: 389 RDLII-EAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHF 447
Query: 255 VNPPYFIPLVEIVPAAWTSERVITRTREIMTEIG 288
+P +PLVEI+P A TS + I T ++ + G
Sbjct: 448 FSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQG 481
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Query: 13 FIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHPVNP 72
I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+T Q I H +P
Sbjct: 391 LIIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSP 450
Query: 73 PYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
+PLVEI+P A TS + I T ++ + G P+ + + GF +NRI
Sbjct: 451 VEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKA-GFYVNRI 498
>sp|Q9WVK7|HCDH_RAT Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus
norvegicus GN=Hadh PE=2 SV=1
Length = 314
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 80/157 (50%), Gaps = 4/157 (2%)
Query: 123 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEE---- 178
GL+G A + A+ G+ V L D + + +K I+ +L+ +K + + +E
Sbjct: 36 GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLKRMAKKKFTENPKAADEFVEK 95
Query: 179 QFGLISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSV 238
+S + + + E++ E L++K+++++ +D F + +TI +S+TSS +
Sbjct: 96 TLSSLSTSTDAASVVHSTDLVVEAIVENLKLKNELFQRLDKFAAEHTIFASNTSSLQITN 155
Query: 239 LSEHSTHRSQFIVAHPVNPPYFIPLVEIVPAAWTSER 275
++ +T + +F H NP + LVE++ TS++
Sbjct: 156 IANATTRQDRFAGLHFFNPVPMMKLVEVIKTPMTSQK 192
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Query: 13 FIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHPVNP 72
+ E++ E L++K+++++ +D F + +TI +S+TSS + ++ +T + +F H NP
Sbjct: 115 LVVEAIVENLKLKNELFQRLDKFAAEHTIFASNTSSLQITNIANATTRQDRFAGLHFFNP 174
Query: 73 PYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
+ LVE++ TS++ + +G PV+ + GF +NR+
Sbjct: 175 VPMMKLVEVIKTPMTSQKTFESLVDFCKTLGKHPVS-CKDTPGFIVNRL 222
>sp|B7M6M2|FADJ_ECO8A Fatty acid oxidation complex subunit alpha OS=Escherichia coli O8
(strain IAI1) GN=fadJ PE=3 SV=1
Length = 714
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Query: 135 SAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGLISGTPVLRECLE 194
AG V + D+ + I +A L+ ++ LK S ++Q LISGT R
Sbjct: 330 KAGLPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKAS-ERDKQLALISGTTDYRGFAH 388
Query: 195 DAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHP 254
+ I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+T Q I H
Sbjct: 389 RDLII-EAVFENLELKQQMVAEVEQNSAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHF 447
Query: 255 VNPPYFIPLVEIVPAAWTSERVITRTREIMTEIG 288
+P +PLVEI+P A TS + I T ++ + G
Sbjct: 448 FSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQG 481
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Query: 13 FIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHPVNP 72
I E+V E L++K Q+ ++ +++TI +S+TSS ++ H+T Q I H +P
Sbjct: 391 LIIEAVFENLELKQQMVAEVEQNSAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSP 450
Query: 73 PYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRI 121
+PLVEI+P A TS + I T ++ + G P+ + + GF +NRI
Sbjct: 451 VEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKA-GFYVNRI 498
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,030,300
Number of Sequences: 539616
Number of extensions: 3969462
Number of successful extensions: 11352
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 248
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 10823
Number of HSP's gapped (non-prelim): 505
length of query: 290
length of database: 191,569,459
effective HSP length: 116
effective length of query: 174
effective length of database: 128,974,003
effective search space: 22441476522
effective search space used: 22441476522
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)