BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17420
(209 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7SXP2|ULA1_DANRE NEDD8-activating enzyme E1 regulatory subunit OS=Danio rerio
GN=nae1 PE=2 SV=2
Length = 533
Score = 153 bits (387), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 114/209 (54%), Gaps = 45/209 (21%)
Query: 1 YRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIHVIRGTLWGDHGQAA 60
YRD+A RDA V+ + + LL +G+ +I+E ++KLFC+NA+F+ V+R
Sbjct: 345 YRDKAMRDAAVVSKHVEMLLQSVGKTPESISEQEIKLFCKNAAFLRVVR----------- 393
Query: 61 LESARICLINATGLGTECGPVNFCPVEGLLLSSISSGIADEYDPRTSNARQISEALENGD 120
C +ADEY T N +I+ +++ D
Sbjct: 394 -----------------------C-----------RSLADEYSVDTFNKDEITSCMDSPD 419
Query: 121 GLLIYHVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSKDDYLH 180
++ ++MLR VD+FY +H+ YPG Y+ QVE DI KLK C++ L E+ V KDDY+H
Sbjct: 420 SEMVLYLMLRSVDRFYQQHSRYPGVYNYQVEEDINKLKLCVNSLLQEYSLNVNVKDDYIH 479
Query: 181 EICRYGGGELHAVSSFLGGCAAQEVIKIL 209
E CRYG E H V++FLGG AAQE IKI+
Sbjct: 480 EFCRYGAAEPHTVAAFLGGSAAQEAIKII 508
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/26 (76%), Positives = 22/26 (84%)
Query: 52 LWGDHGQAALESARICLINATGLGTE 77
LWGDHGQ ALE+A +CLINAT GTE
Sbjct: 18 LWGDHGQEALENAHVCLINATASGTE 43
>sp|Q5ZIE6|ULA1_CHICK NEDD8-activating enzyme E1 regulatory subunit OS=Gallus gallus
GN=NAE1 PE=2 SV=1
Length = 535
Score = 143 bits (361), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 111/209 (53%), Gaps = 45/209 (21%)
Query: 1 YRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIHVIRGTLWGDHGQAA 60
YR++A RD + A +LL LG+ +I+E ++KL C N++F+ V+R
Sbjct: 347 YREKAKRDIAAVGNHAAKLLQSLGKAPESISERELKLLCSNSAFLRVVR----------- 395
Query: 61 LESARICLINATGLGTECGPVNFCPVEGLLLSSISSGIADEYDPRTSNARQISEALENGD 120
C +++EY T N +I ++N D
Sbjct: 396 -----------------------C-----------RSLSEEYGLNTFNKDEIISNMDNPD 421
Query: 121 GLLIYHVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSKDDYLH 180
++ ++MLR VD+FY +H YPG Y+ QVE DI KLKSC++ E G VL KDDY+H
Sbjct: 422 SEVVLYLMLRAVDRFYKQHGRYPGVYNYQVEDDIGKLKSCLTSFLQEHGLSVLVKDDYVH 481
Query: 181 EICRYGGGELHAVSSFLGGCAAQEVIKIL 209
E CRYG E HA+++F+GG AAQE+IK++
Sbjct: 482 EFCRYGAAEPHAIAAFMGGAAAQEIIKVI 510
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/26 (76%), Positives = 22/26 (84%)
Query: 52 LWGDHGQAALESARICLINATGLGTE 77
LWGDHGQ ALESA +C+INAT GTE
Sbjct: 20 LWGDHGQEALESAHVCVINATATGTE 45
>sp|Q8VBW6|ULA1_MOUSE NEDD8-activating enzyme E1 regulatory subunit OS=Mus musculus
GN=Nae1 PE=2 SV=1
Length = 534
Score = 140 bits (354), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 111/209 (53%), Gaps = 45/209 (21%)
Query: 1 YRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIHVIRGTLWGDHGQAA 60
YR++A +DA + +LL +GQ +I+E ++KL C N++F+ V+R
Sbjct: 346 YREKAKKDAAAVGNHVAKLLQSVGQAPESISEKELKLLCSNSAFLRVVR----------- 394
Query: 61 LESARICLINATGLGTECGPVNFCPVEGLLLSSISSGIADEYDPRTSNARQISEALENGD 120
C +A+EY T N +I +++N D
Sbjct: 395 -----------------------C-----------RSLAEEYGLDTVNKDEIISSMDNPD 420
Query: 121 GLLIYHVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSKDDYLH 180
++ ++MLR VD+F+ +H YPG + QVE DI KLKSC++ E+G V+ KDDY+H
Sbjct: 421 NEIVLYLMLRAVDRFHKQHGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVH 480
Query: 181 EICRYGGGELHAVSSFLGGCAAQEVIKIL 209
E CRYG E H +++FLGG AAQEVIKI+
Sbjct: 481 EFCRYGAAEPHTIAAFLGGAAAQEVIKII 509
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 33/53 (62%), Gaps = 7/53 (13%)
Query: 52 LWGDHGQAALESARICLINATGLGTEC-------GPVNFCPVEGLLLSSISSG 97
LWGDHGQ ALESA +CLINAT GTE G +F ++G L+S +G
Sbjct: 19 LWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNLVSGEDAG 71
>sp|Q4R3L6|ULA1_MACFA NEDD8-activating enzyme E1 regulatory subunit OS=Macaca
fascicularis GN=NAE1 PE=2 SV=1
Length = 510
Score = 140 bits (354), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 111/209 (53%), Gaps = 45/209 (21%)
Query: 1 YRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIHVIRGTLWGDHGQAA 60
YR++A +DA + +LL +GQ +I+E ++KL C N++F+ V+R
Sbjct: 322 YREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVR----------- 370
Query: 61 LESARICLINATGLGTECGPVNFCPVEGLLLSSISSGIADEYDPRTSNARQISEALENGD 120
C +A+EY T N +I +++N D
Sbjct: 371 -----------------------C-----------RSLAEEYGLDTINKDEIISSMDNPD 396
Query: 121 GLLIYHVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSKDDYLH 180
++ ++MLR VD+F+ +H YPG + QVE DI KLKSC++ E+G V+ KDDY+H
Sbjct: 397 NEIVLYLMLRAVDRFHKQHGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVH 456
Query: 181 EICRYGGGELHAVSSFLGGCAAQEVIKIL 209
E CRYG E H +++FLGG AAQEVIKI+
Sbjct: 457 EFCRYGAAEPHTIAAFLGGAAAQEVIKII 485
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/26 (80%), Positives = 22/26 (84%)
Query: 52 LWGDHGQAALESARICLINATGLGTE 77
LWGDHGQ ALESA +CLINAT GTE
Sbjct: 19 LWGDHGQEALESAHVCLINATATGTE 44
>sp|Q9Z1A5|ULA1_RAT NEDD8-activating enzyme E1 regulatory subunit OS=Rattus norvegicus
GN=Nae1 PE=1 SV=1
Length = 534
Score = 140 bits (352), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 109/209 (52%), Gaps = 45/209 (21%)
Query: 1 YRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIHVIRGTLWGDHGQAA 60
YR++A +DA + +LL GQ +I+E ++KL C N++F+ V+R
Sbjct: 346 YREKAKKDAAAVGNHVAKLLQSCGQAPESISEKELKLLCSNSAFLRVVR----------- 394
Query: 61 LESARICLINATGLGTECGPVNFCPVEGLLLSSISSGIADEYDPRTSNARQISEALENGD 120
+A+EY T N +I +++N D
Sbjct: 395 ----------------------------------CRSLAEEYGLHTVNKDEIISSMDNPD 420
Query: 121 GLLIYHVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSKDDYLH 180
++ ++MLR VD+F+ +H YPG + QVE DI KLKSC++ E+G V+ KDDY+H
Sbjct: 421 NEIVLYLMLRAVDRFHKQHGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVH 480
Query: 181 EICRYGGGELHAVSSFLGGCAAQEVIKIL 209
E CRYG E H V++FLGG AAQEVIKI+
Sbjct: 481 EFCRYGAAEPHTVAAFLGGAAAQEVIKII 509
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/26 (80%), Positives = 22/26 (84%)
Query: 52 LWGDHGQAALESARICLINATGLGTE 77
LWGDHGQ ALESA +CLINAT GTE
Sbjct: 19 LWGDHGQEALESAHVCLINATATGTE 44
>sp|Q13564|ULA1_HUMAN NEDD8-activating enzyme E1 regulatory subunit OS=Homo sapiens
GN=NAE1 PE=1 SV=1
Length = 534
Score = 138 bits (347), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 110/209 (52%), Gaps = 45/209 (21%)
Query: 1 YRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIHVIRGTLWGDHGQAA 60
YR++A +DA + +LL +GQ +I+E ++KL C N++F+ V+R
Sbjct: 346 YREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVR----------- 394
Query: 61 LESARICLINATGLGTECGPVNFCPVEGLLLSSISSGIADEYDPRTSNARQISEALENGD 120
C +A+EY T N +I +++N D
Sbjct: 395 -----------------------C-----------RSLAEEYGLDTINKDEIISSMDNPD 420
Query: 121 GLLIYHVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSKDDYLH 180
++ ++MLR VD+F+ + YPG + QVE DI KLKSC++ E+G V+ KDDY+H
Sbjct: 421 NEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVH 480
Query: 181 EICRYGGGELHAVSSFLGGCAAQEVIKIL 209
E CRYG E H +++FLGG AAQEVIKI+
Sbjct: 481 EFCRYGAAEPHTIAAFLGGAAAQEVIKII 509
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/26 (80%), Positives = 22/26 (84%)
Query: 52 LWGDHGQAALESARICLINATGLGTE 77
LWGDHGQ ALESA +CLINAT GTE
Sbjct: 19 LWGDHGQEALESAHVCLINATATGTE 44
>sp|Q6NTW6|ULA1_XENLA NEDD8-activating enzyme E1 regulatory subunit OS=Xenopus laevis
GN=nae1 PE=2 SV=1
Length = 533
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 105/209 (50%), Gaps = 45/209 (21%)
Query: 1 YRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIHVIRGTLWGDHGQAA 60
YR++A +DA + +LL +G+P +I+E ++LFCRN +F+ V+R
Sbjct: 345 YREKAKKDASAVESCVSKLLQSVGRPPESISERDIRLFCRNCAFLRVVR----------- 393
Query: 61 LESARICLINATGLGTECGPVNFCPVEGLLLSSISSGIADEYDPRTSNARQISEALENGD 120
+ +EY T+ I +EN D
Sbjct: 394 ----------------------------------CRSLEEEYGLDTAKKDDIVSLMENPD 419
Query: 121 GLLIYHVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSKDDYLH 180
++ ++MLR VD+F + YPG Y+ Q+E DI KLKSC++ L E+G + KD+Y+
Sbjct: 420 NEIVLYLMLRAVDRFQKQLGRYPGIYNYQIESDIGKLKSCLNGLLQEYGLSLTVKDEYIQ 479
Query: 181 EICRYGGGELHAVSSFLGGCAAQEVIKIL 209
E CRYG E H ++SFLGG AAQE IKI+
Sbjct: 480 EFCRYGAAEPHTIASFLGGAAAQEAIKII 508
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/26 (80%), Positives = 22/26 (84%)
Query: 52 LWGDHGQAALESARICLINATGLGTE 77
LWGDHGQ ALESA +CLINAT GTE
Sbjct: 18 LWGDHGQEALESAHVCLINATATGTE 43
>sp|Q9VTE9|ULA1_DROME NEDD8-activating enzyme E1 regulatory subunit OS=Drosophila
melanogaster GN=APP-BP1 PE=1 SV=1
Length = 524
Score = 120 bits (302), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 105/209 (50%), Gaps = 48/209 (22%)
Query: 1 YRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIHVIRGTLWGDHGQAA 60
YR QA +DAD +Y + Q+ L QL P+ +I E V+L C+ A+ + VIRGT
Sbjct: 339 YRQQALQDADQVYHKCQEYLKQLALPADSIDERSVRLICKEAAGLAVIRGT--------- 389
Query: 61 LESARICLINATGLGTECGPVNFCPVEGLLLSSISSGIADEYDPRTSNARQISEALENGD 120
IA+EY+ ++S + E E
Sbjct: 390 ------------------------------------RIAEEYE-KSSRLLPLVEDNELQG 412
Query: 121 GLLIYHVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSKDDYLH 180
L Y+ LR ++F +E PGE VE DI +LKS +K+ ++ G DD LH
Sbjct: 413 NLTAYNFALRAYERFLSECGNIPGEC--IVEQDIGRLKSIAAKMLSDLGMHATISDDVLH 470
Query: 181 EICRYGGGELHAVSSFLGGCAAQEVIKIL 209
EICRYGG ELHAVS+F+GGCAAQEVIKI+
Sbjct: 471 EICRYGGAELHAVSAFIGGCAAQEVIKII 499
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 7/43 (16%)
Query: 52 LWGDHGQAALESARICLINATGLGTECGPVNFCPVEGLLLSSI 94
LWG+HGQ LE+A +CL+N T +G E +GL+L I
Sbjct: 24 LWGEHGQTLLEAATVCLVNVTAVGCETA-------KGLVLPGI 59
>sp|Q54JM3|ULA1_DICDI NEDD8-activating enzyme E1 regulatory subunit OS=Dictyostelium
discoideum GN=nae1 PE=3 SV=1
Length = 520
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 51/210 (24%)
Query: 1 YRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIHVIRGTLWGDHGQAA 60
Y+++A D Q+L ++G+ S+I+ VK FC+N F+++IR
Sbjct: 336 YQEKALADLSEFSGYVDQILTKVGK--SSISSDLVKKFCKNTRFLNIIR----------- 382
Query: 61 LESARICLINATGLGTECGPVNFCPVEGLLLSSISSGIADEYDPRTSNARQISEALENGD 120
I++EY+ +N I LE D
Sbjct: 383 ----------------------------------YRTISEEYNQPKTNL--IKSELEQAD 406
Query: 121 GLLIYHVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGV-LSKDDYL 179
+++++++LRG+DKFY ++ YPG DD E DI LK+ I++ AE L KDDY+
Sbjct: 407 TVMVFYILLRGIDKFYKTYHKYPGSSDD-FESDIPLLKTVITQYLAEINISNDLVKDDYI 465
Query: 180 HEICRYGGGELHAVSSFLGGCAAQEVIKIL 209
E R+GG ELH ++S +GG +QE+IK++
Sbjct: 466 AEFVRFGGSELHNIASLMGGVTSQEIIKLI 495
Score = 34.3 bits (77), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 52 LWGDHGQAALESARICLINATGLGTEC 78
LWG+ GQ+ LE + I L+N + GTE
Sbjct: 17 LWGEDGQSKLERSHILLLNGSATGTET 43
>sp|P42744|ULA1_ARATH NEDD8-activating enzyme E1 regulatory subunit OS=Arabidopsis
thaliana GN=AXR1 PE=1 SV=1
Length = 540
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 50/212 (23%)
Query: 1 YRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIHVIRGTLWGDHGQAA 60
Y +A D VI R + +L ++G+ S+I + +K FC+NA + + R +
Sbjct: 351 YLAKAEADFLVIEERVKNILKKIGRDPSSIPKPTIKSFCKNARKLKLCRYRM-------- 402
Query: 61 LESARICLINATGLGTECGPVNFCPVEGLLLSSISSGIADEYDPRTSNARQISEALENGD 120
+ DE+ R + +I + L + D
Sbjct: 403 -------------------------------------VEDEF--RNPSVTEIQKYLADED 423
Query: 121 --GLLIYHVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGC-GVLSKDD 177
G + ++++LR D+F +N +PG++D ++ DI +LK+ L + GC G + DD
Sbjct: 424 YSGAMGFYILLRAADRFAANYNKFPGQFDGGMDEDISRLKTTALSLLTDLGCNGSVLPDD 483
Query: 178 YLHEICRYGGGELHAVSSFLGGCAAQEVIKIL 209
+HE+CR+G E+H VS+F+GG A+QEVIK++
Sbjct: 484 LIHEMCRFGASEIHVVSAFVGGIASQEVIKLV 515
Score = 37.7 bits (86), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 7/45 (15%)
Query: 52 LWGDHGQAALESARICLINATGLGTECGPVNFCPVEGLLLSSISS 96
+WG+ GQAALE A ICL+N CGP ++ L+L + S
Sbjct: 30 IWGEVGQAALEEASICLLN-------CGPTGSEALKNLVLGGVGS 67
>sp|Q18217|ULA1_CAEEL NEDD8-activating enzyme E1 regulatory subunit OS=Caenorhabditis
elegans GN=ula-1 PE=3 SV=2
Length = 541
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 125 YHVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEW------GCGVLSK--D 176
+ +++R V +F E YPG V D LK + L E + +K D
Sbjct: 424 WMLLMRAVGRFQKEKGRYPGTNGVPVSIDAQDLKKRVEVLIREALKDEQDFTSISNKVTD 483
Query: 177 DYLHEICRYGGGELHAVSSFLGGCAAQEVIKI 208
+ EICR+G ELH +SS++GG AAQE+IK+
Sbjct: 484 TAIAEICRFGAAELHVISSYVGGIAAQEIIKL 515
>sp|Q9UT93|ULA1_SCHPO NEDD8-activating enzyme E1 regulatory subunit
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=uba5 PE=3 SV=2
Length = 517
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 86/211 (40%), Gaps = 53/211 (25%)
Query: 1 YRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIHVIRGTLWGDHGQAA 60
Y++++ D + QQ L +L + IT+ ++K F RN
Sbjct: 333 YKEKSENDILKFKKYVQQTLKRLNRSVEEITDLEIKHFSRN------------------- 373
Query: 61 LESARICL-INATGLGTECGPVNFCPVEGLLLSSISSGIADEYDPRTSNARQISEALENG 119
CL I T + +EY P TSN+ S ++ +
Sbjct: 374 ------CLNIKVMDFKT---------------------MKEEYQP-TSNSVLESSSI-DS 404
Query: 120 DGLLIYHVMLRGVDKFYTEH-NTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSKDDY 178
+ LL +++ R D +H Y + D + I +S +S++ E V+
Sbjct: 405 NSLLPWYLAFRIYDTILEKHGKNYKEAFSDTTKT-ISVAQSFLSQIGLEKFFDVVYTA-- 461
Query: 179 LHEICRYGGGELHAVSSFLGGCAAQEVIKIL 209
+ E+ R G ELH++SSF+GG AQE IK+L
Sbjct: 462 IQELERADGHELHSISSFIGGIVAQETIKLL 492
>sp|Q5U300|UBA1_RAT Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus
GN=Uba1 PE=1 SV=1
Length = 1058
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 42/82 (51%)
Query: 126 HVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSKDDYLHEICRY 185
H+ + + +F +HN P +++ ++V L ++ + +D + ++
Sbjct: 330 HIGFQALHQFCAQHNRPPRPRNEEDATELVTLAQAVNARSPPAVQQDNVDEDLIRKLAYV 389
Query: 186 GGGELHAVSSFLGGCAAQEVIK 207
G+L +++F+GG AAQEV+K
Sbjct: 390 AAGDLAPINAFIGGLAAQEVMK 411
>sp|P22515|UBA1_YEAST Ubiquitin-activating enzyme E1 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBA1 PE=1 SV=2
Length = 1024
Score = 39.7 bits (91), Expect = 0.017, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 126 HVMLRGVDKFYTEHN-TYPGEYDDQVEPDIVKLKSCISKLTAE-WGCGVLSKDDYLHEIC 183
H+ + + +F HN P +D+ +++KL + +S E G GV +D + E+
Sbjct: 293 HLGFQALHQFAVRHNGELPRTMNDEDANELIKLVTDLSVQQPEVLGEGVDVNEDLIKELS 352
Query: 184 RYGGGELHAVSSFLGGCAAQEVIK 207
G++ V +F GG AQEV+K
Sbjct: 353 YQARGDIPGVVAFFGGLVAQEVLK 376
>sp|Q29504|UBA1_RABIT Ubiquitin-like modifier-activating enzyme 1 OS=Oryctolagus
cuniculus GN=UBA1 PE=2 SV=1
Length = 1058
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 41/82 (50%)
Query: 126 HVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSKDDYLHEICRY 185
H+ + + KF +H+ P +++ ++V L ++ + +D + +
Sbjct: 330 HIGFQALHKFCAQHSRPPRPRNEEDAAELVTLARAVNSKASSAVQQDSLDEDLIRNLAFV 389
Query: 186 GGGELHAVSSFLGGCAAQEVIK 207
G+L +++F+GG AAQEV+K
Sbjct: 390 AAGDLAPINAFIGGLAAQEVMK 411
>sp|Q02053|UBA1_MOUSE Ubiquitin-like modifier-activating enzyme 1 OS=Mus musculus GN=Uba1
PE=1 SV=1
Length = 1058
Score = 37.7 bits (86), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 41/82 (50%)
Query: 126 HVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSKDDYLHEICRY 185
H+ + + +F HN P +++ ++V L ++ + +D + ++
Sbjct: 330 HIGFQALHQFCALHNQPPRPRNEEDATELVGLAQAVNARSPPSVKQNSLDEDLIRKLAYV 389
Query: 186 GGGELHAVSSFLGGCAAQEVIK 207
G+L +++F+GG AAQEV+K
Sbjct: 390 AAGDLAPINAFIGGLAAQEVMK 411
>sp|Q06624|RHC31_YEAST DNA damage tolerance protein RHC31 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=AOS1 PE=1 SV=1
Length = 347
Score = 37.0 bits (84), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 175 KDDYLHEICRYGGGELHAVSSFLGGCAAQEVIKIL 209
KDDY+ + + G E V++ +GG AQ+VI IL
Sbjct: 288 KDDYIQQFIKQKGIEFAPVAAIIGGAVAQDVINIL 322
>sp|P31254|UBA1Y_MOUSE Ubiquitin-like modifier-activating enzyme 1 Y OS=Mus musculus
GN=Ube1ay PE=2 SV=2
Length = 1058
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 126 HVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSKD----DYLHE 181
H+ + + +F T+H+ P ++++ ++V L ++ + +D D + +
Sbjct: 329 HIGFQALHQFCTQHSRPPRPHNEEDAEELVTLAQSVNA----QALPAVQQDCLDIDLIRK 384
Query: 182 ICRYGGGELHAVSSFLGGCAAQEVIK 207
+ G+L +++F GG AAQEV+K
Sbjct: 385 LAYVAAGDLAPMNAFFGGLAAQEVMK 410
>sp|Q1X880|POLG_YEFVU Genome polyprotein OS=Yellow fever virus (isolate
Uganda/A7094A4/1948) PE=3 SV=1
Length = 3412
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 12/78 (15%)
Query: 116 LENGDGLLIYHVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSK 175
L+ GDG+ ++ R D + T+++ YP D VKL S I E CG+ S
Sbjct: 791 LKCGDGIFVF----RDSDDWLTKYSYYP--------EDPVKLASIIKASYEEGKCGLNSV 838
Query: 176 DDYLHEICRYGGGELHAV 193
D HE+ R E++A+
Sbjct: 839 DSLEHEMWRSRADEINAI 856
>sp|Q1X881|POLG_YEFVN Genome polyprotein OS=Yellow fever virus (isolate Angola/14FA/1971)
PE=3 SV=1
Length = 3412
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 12/78 (15%)
Query: 116 LENGDGLLIYHVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSK 175
L+ GDG+ ++ R D + T+++ YP D VKL S I E CG+ S
Sbjct: 791 LKCGDGIFVF----RDSDDWLTKYSYYP--------EDPVKLASIIKASHEEGKCGLNSV 838
Query: 176 DDYLHEICRYGGGELHAV 193
D HE+ R E++A+
Sbjct: 839 DSLEHEMWRSRADEINAI 856
>sp|Q074N0|POLG_YEFVE Genome polyprotein OS=Yellow fever virus (isolate
Ethiopia/Couma/1961) PE=3 SV=1
Length = 3412
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 12/78 (15%)
Query: 116 LENGDGLLIYHVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSK 175
L+ GDG+ ++ R D + T+++ YP D VKL S I E CG+ S
Sbjct: 791 LKCGDGIFVF----RDSDDWLTKYSYYP--------EDPVKLASIIKASHEEGKCGLNSV 838
Query: 176 DDYLHEICRYGGGELHAV 193
D HE+ R E++A+
Sbjct: 839 DSLEHEMWRSRADEINAI 856
>sp|P22314|UBA1_HUMAN Ubiquitin-like modifier-activating enzyme 1 OS=Homo sapiens GN=UBA1
PE=1 SV=3
Length = 1058
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/82 (21%), Positives = 40/82 (48%)
Query: 126 HVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSKDDYLHEICRY 185
H+ + + +F +H P +++ ++V L ++ +D + ++
Sbjct: 330 HIGFQALHQFCAQHGRPPRPRNEEDAAELVALAQAVNARALPAVQQNNLDEDLIRKLAYV 389
Query: 186 GGGELHAVSSFLGGCAAQEVIK 207
G+L +++F+GG AAQEV+K
Sbjct: 390 AAGDLAPINAFIGGLAAQEVMK 411
>sp|A3KMV5|UBA1_BOVIN Ubiquitin-like modifier-activating enzyme 1 OS=Bos taurus GN=UBA1
PE=2 SV=1
Length = 1058
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/82 (20%), Positives = 41/82 (50%)
Query: 126 HVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSKDDYLHEICRY 185
H+ + + F +H P ++++ ++V + ++ + +D + ++
Sbjct: 330 HIGFQALHHFCAQHGRSPRPHNEEDAAELVTIAQAVNARSLPAVQQGSLDEDLIRKLAYV 389
Query: 186 GGGELHAVSSFLGGCAAQEVIK 207
G+L +++F+GG AAQEV+K
Sbjct: 390 AAGDLAPINAFIGGLAAQEVMK 411
>sp|Q6J3P1|POLG_YEFVC Genome polyprotein OS=Yellow fever virus (isolate Ivory Coast/1999)
PE=3 SV=1
Length = 3411
Score = 34.7 bits (78), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 12/78 (15%)
Query: 116 LENGDGLLIYHVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSK 175
L+ GDG+ I+ R D + +++ YP D VKL S + E CG+ S
Sbjct: 791 LKCGDGIFIF----RDSDDWLNKYSYYP--------EDPVKLASIVKASFEEGKCGLNSV 838
Query: 176 DDYLHEICRYGGGELHAV 193
D HE+ R E++A+
Sbjct: 839 DSLEHEMWRSRADEINAI 856
>sp|Q89277|POLG_YEFVF Genome polyprotein OS=Yellow fever virus (strain French neurotropic
vaccine FNV) PE=3 SV=2
Length = 3411
Score = 34.7 bits (78), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 12/78 (15%)
Query: 116 LENGDGLLIYHVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSK 175
L+ GDG+ I+ R D + +++ YP D VKL S + E CG+ S
Sbjct: 791 LKCGDGIFIF----RDSDDWLNKYSYYP--------EDPVKLASIVKASFEEGKCGLNSV 838
Query: 176 DDYLHEICRYGGGELHAV 193
D HE+ R E++A+
Sbjct: 839 DSLEHEMWRSRADEINAI 856
>sp|P03314|POLG_YEFV1 Genome polyprotein OS=Yellow fever virus (strain 17D vaccine) PE=1
SV=1
Length = 3411
Score = 34.7 bits (78), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 12/78 (15%)
Query: 116 LENGDGLLIYHVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSK 175
L+ GDG+ I+ R D + +++ YP D VKL S + E CG+ S
Sbjct: 791 LKCGDGIFIF----RDSDDWLNKYSYYP--------EDPVKLASIVKASFEEGKCGLNSV 838
Query: 176 DDYLHEICRYGGGELHAV 193
D HE+ R E++A+
Sbjct: 839 DSLEHEMWRSRADEINAI 856
>sp|Q9YRV3|POLG_YEFVT Genome polyprotein OS=Yellow fever virus (strain
Trinidad/TRINID79A/1979) PE=3 SV=1
Length = 3411
Score = 34.7 bits (78), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 12/78 (15%)
Query: 116 LENGDGLLIYHVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSK 175
L+ GDG+ I+ R D + +++ YP D VKL S + E CG+ S
Sbjct: 791 LKCGDGIFIF----RDSDDWLNKYSYYP--------EDPVKLASIVKASFEEGKCGLNSV 838
Query: 176 DDYLHEICRYGGGELHAV 193
D HE+ R E++A+
Sbjct: 839 DSLEHEMWRSRADEINAI 856
>sp|Q6DV88|POLG_YEFVA Genome polyprotein OS=Yellow fever virus (strain Ghana/Asibi/1927)
PE=1 SV=1
Length = 3411
Score = 34.7 bits (78), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 12/78 (15%)
Query: 116 LENGDGLLIYHVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSK 175
L+ GDG+ I+ R D + +++ YP D VKL S + E CG+ S
Sbjct: 791 LKCGDGIFIF----RDSDDWLNKYSYYP--------EDPVKLASIVKASFEEGKCGLNSV 838
Query: 176 DDYLHEICRYGGGELHAV 193
D HE+ R E++A+
Sbjct: 839 DSLEHEMWRSRADEINAI 856
>sp|Q38X88|AROE_LACSS Shikimate dehydrogenase OS=Lactobacillus sakei subsp. sakei (strain
23K) GN=aroE PE=3 SV=1
Length = 290
Score = 34.7 bits (78), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 60 ALESARICLINATGLGTECGPVNFCPVEGLLLSSISSGIADE-YDPRTS----NARQISE 114
AL++A CLINAT +G P N P+ L S +AD Y PR + A++
Sbjct: 191 ALQNAD-CLINATNIGMTATPGNPLPINLLQYLPEDSLVADLIYAPRETAFLKTAQKAHY 249
Query: 115 ALENGDGLLIYHVML 129
++NG G+LI L
Sbjct: 250 QIQNGLGMLIEQAAL 264
>sp|Q98803|POLG_YEFVI Genome polyprotein OS=Yellow fever virus (isolate Ivory
Coast/85-82H/1982) PE=3 SV=1
Length = 3411
Score = 34.3 bits (77), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 12/78 (15%)
Query: 116 LENGDGLLIYHVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSK 175
L+ GDG+ I+ R D + +++ YP D VKL S + E CG+ S
Sbjct: 791 LKCGDGIFIF----RDSDDWLNKYSYYP--------EDPVKLASIVKASFEEGKCGLNSV 838
Query: 176 DDYLHEICRYGGGELHAV 193
D HE+ R E++A+
Sbjct: 839 DSLDHEMWRSRADEINAI 856
>sp|P29165|POLG_YEFV8 Genome polyprotein (Fragment) OS=Yellow fever virus (isolate
Peru/1899/1981) PE=3 SV=1
Length = 1163
Score = 34.3 bits (77), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 12/78 (15%)
Query: 116 LENGDGLLIYHVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSK 175
L+ GDG+ I+ R D + +++ YP D VKL S + E CG+ S
Sbjct: 791 LKCGDGVFIF----RDSDDWLNKYSYYP--------EDPVKLASIVKASFEEGKCGLNSV 838
Query: 176 DDYLHEICRYGGGELHAV 193
D HE+ R E++A+
Sbjct: 839 DSLEHEMWRSRADEINAI 856
>sp|O94609|UBA1_SCHPO Ubiquitin-activating enzyme E1 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ptr3 PE=1 SV=1
Length = 1012
Score = 33.9 bits (76), Expect = 0.72, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 125 YHVMLRGVDKFYTEHN-TYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSKDDYLHEIC 183
YH+ + + F H + P +D D + K+ + V + + EI
Sbjct: 291 YHIAFQALSAFADAHEGSLPRPRND---IDAAEFFEFCKKIASTLQFDVELDEKLIKEIS 347
Query: 184 RYGGGELHAVSSFLGGCAAQEVIK 207
G+L A+S+FLGG AQEV+K
Sbjct: 348 YQARGDLVAMSAFLGGAVAQEVLK 371
>sp|A0AVT1|UBA6_HUMAN Ubiquitin-like modifier-activating enzyme 6 OS=Homo sapiens GN=UBA6
PE=1 SV=1
Length = 1052
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 116 LENGDGLLIYHVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSK 175
N + L H + +D+F +++ P Q +++KL + IS+ T E V
Sbjct: 316 FSNPEAPLEIHTAMLALDQFQEKYSRKPNVGCQQDSEELLKLATSISE-TLEEKPDV--N 372
Query: 176 DDYLHEICRYGGGELHAVSSFLGGCAAQEVIK 207
D +H + G L +++ +GG A+QEV+K
Sbjct: 373 ADIVHWLSWTAQGFLSPLAAAVGGVASQEVLK 404
>sp|Q7VSV5|COAE_BORPE Dephospho-CoA kinase OS=Bordetella pertussis (strain Tohama I /
ATCC BAA-589 / NCTC 13251) GN=coaE PE=3 SV=1
Length = 214
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 158 KSCISKLTAEWGCGVLSKDDYLHEICRYGGGELHAVSSFLG 198
KS ++ + AEWG V+ D+ H + GG + A++ G
Sbjct: 14 KSRVADMLAEWGASVIDADEISHALTAPGGAAMPAIAREFG 54
>sp|Q7W3R8|COAE_BORPA Dephospho-CoA kinase OS=Bordetella parapertussis (strain 12822 /
ATCC BAA-587 / NCTC 13253) GN=coaE PE=3 SV=2
Length = 214
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 158 KSCISKLTAEWGCGVLSKDDYLHEICRYGGGELHAVSSFLG 198
KS ++ + AEWG V+ D+ H + GG + A++ G
Sbjct: 14 KSRVADMLAEWGASVIDADEISHALTAPGGAAMPAIAREFG 54
>sp|Q7WF46|COAE_BORBR Dephospho-CoA kinase OS=Bordetella bronchiseptica (strain ATCC
BAA-588 / NCTC 13252 / RB50) GN=coaE PE=3 SV=2
Length = 214
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 158 KSCISKLTAEWGCGVLSKDDYLHEICRYGGGELHAVSSFLG 198
KS ++ + AEWG V+ D+ H + GG + A++ G
Sbjct: 14 KSRVADMLAEWGASVIDADEISHALTAPGGAAMPAIAREFG 54
>sp|Q9JLB9|PVRL3_MOUSE Poliovirus receptor-related protein 3 OS=Mus musculus GN=Pvrl3 PE=1
SV=1
Length = 549
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 157 LKSCISKLTAEWGCGVLSKDDYLHEI----CRYGGGELHAVSSFLGGCAAQEVIKI 208
KS S+L +W G+L+ D+ LH + Y G + VS+ LG + Q+VI I
Sbjct: 300 FKSVWSRLDGQWPDGLLASDNTLHFVHPLTVNYSGVYVCKVSNSLGQRSDQKVIYI 355
>sp|Q7D5X9|MOEZ_MYCTU Probable adenylyltransferase/sulfurtransferase MoeZ
OS=Mycobacterium tuberculosis GN=moeZ PE=1 SV=1
Length = 392
Score = 32.3 bits (72), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 35/149 (23%)
Query: 20 LHQLGQPSSAITEAQVKLFCRNASFIHVIRGTLWGDHGQAALESARICLINATGLGTEC- 78
L L +P+SA++ +V + R H+I L G GQ L++AR+ +I A GLG
Sbjct: 5 LPPLVEPASALSREEVARYSR-----HLIIPDL-GVDGQKRLKNARVLVIGAGGLGAPTL 58
Query: 79 -----------GPVNFCPV-EGLLLSSISSGIADEYDPRTSNAR---------------Q 111
G V+F V E L + G+AD + +AR +
Sbjct: 59 LYLAAAGVGTIGIVDFDVVDESNLQRQVIHGVADVGRSKAQSARDSIVAINPLIRVRLHE 118
Query: 112 ISEALENGDGLLI-YHVMLRGVDKFYTEH 139
+ A N L Y ++L G D F T +
Sbjct: 119 LRLAPSNAVDLFKQYDLILDGTDNFATRY 147
>sp|Q1MA18|MNME_RHIL3 tRNA modification GTPase MnmE OS=Rhizobium leguminosarum bv. viciae
(strain 3841) GN=mnmE PE=3 SV=1
Length = 439
Score = 32.0 bits (71), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 62/166 (37%), Gaps = 34/166 (20%)
Query: 48 IRGTLWGDHGQAALESARICLINATGL----GTECGPVNFCPVE----GLLLSSISSGIA 99
+R + G+ + A E+ ++ L+ GL G E VE GL S I
Sbjct: 104 VRMAVEGEFSRRAFENGKLDLVEVEGLADLIGAETEMQRRLAVEHSAGGL------SAIY 157
Query: 100 DEYDPRTSNARQISEALENGDGLLIYHVMLRGVDKFYTEHNTYPGEYDDQVEPDIVKLKS 159
D + R + AR + EA + + E + PG D V D+ KL+S
Sbjct: 158 DSWAERLTRARALVEA-----------------ELDFPEEDDVPGSVSDAVWADMAKLRS 200
Query: 160 CISKLTAEWGCGVLSKDDYLHEICRYGGGELHAVSSFLGGCAAQEV 205
I A G + +D + I G SS L A ++V
Sbjct: 201 DIGDHLAAASAGEIIRDGFKVVIA---GAPNAGKSSLLNALARRDV 243
>sp|Q58907|RGYR_METJA Reverse gyrase OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=rgy PE=3
SV=1
Length = 1613
Score = 31.2 bits (69), Expect = 4.8, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 133 DKFYTEHNTYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSKDDYLH 180
+ F + TY E++++ E D++ +K KLT E G + KD +H
Sbjct: 1235 EAFINGYKTYKKEHEERFECDLLPVKEVFKKLTFEKGRKEILKDSKIH 1282
>sp|P52495|UBA1_CANAW Ubiquitin-activating enzyme E1 1 OS=Candida albicans (strain WO-1)
GN=UBA1 PE=3 SV=2
Length = 1021
Score = 30.8 bits (68), Expect = 6.0, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 126 HVMLRGVDKFYTEHN-TYPGEYDDQVEPDIVKLKSCISKLTAEWGCGVLSKDD----YLH 180
H+ + + F T+H P Y++Q + + ++ A +L +D YL
Sbjct: 292 HLGFQALHAFQTKHQGELPAPYNEQDATEAFRY----AEELATQNPSILGEDKLDEKYLK 347
Query: 181 EICRYGGGELHAVSSFLGGCAAQEVIK 207
E+ G++ V +F GG AQEV+K
Sbjct: 348 ELFYQARGDIPGVVAFYGGLIAQEVLK 374
>sp|O59930|LEU3_PHACH 3-isopropylmalate dehydrogenase OS=Phanerochaete chrysosporium
GN=LEU2 PE=2 SV=1
Length = 380
Score = 30.8 bits (68), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 24 GQPSSAITEAQVKLFCRNASFIHVIRGTLWGDHGQAALESARICLINATGLGTECGPVNF 83
G+P +A T KL +A + I G WG + + E A + L A GL P NF
Sbjct: 56 GEPLTAATLEACKLA--DAILLGAIGGPKWGVNSKVRPEQALLALRKALGLYANIRPANF 113
Query: 84 CPVEGLLLSSISSGIADEYD 103
L S + +A D
Sbjct: 114 ASDSLLAYSPLKPSVARGVD 133
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,724,864
Number of Sequences: 539616
Number of extensions: 3104452
Number of successful extensions: 6696
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 6643
Number of HSP's gapped (non-prelim): 71
length of query: 209
length of database: 191,569,459
effective HSP length: 112
effective length of query: 97
effective length of database: 131,132,467
effective search space: 12719849299
effective search space used: 12719849299
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)