BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17422
(512 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1YOV|A Chain A, Insights Into The Ubiquitin Transfer Cascade From The
Refined Structure Of The Activating Enzyme For Nedd8
pdb|1YOV|C Chain C, Insights Into The Ubiquitin Transfer Cascade From The
Refined Structure Of The Activating Enzyme For Nedd8
Length = 537
Score = 342 bits (878), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 176/405 (43%), Positives = 250/405 (61%), Gaps = 54/405 (13%)
Query: 120 SFFLDVDSIGKSRAEVATQLLLELNPDCQGDFVDENPQVLMANDPNFFQSFHMVISTNLP 179
+FFL SIGK+RAE A + L ELN D G FV+E+P+ L+ NDP+FF F +V++T LP
Sbjct: 76 NFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLP 135
Query: 180 ETTLIELSKTLWSLNIPLLACRSYGFIGSIRLQISEHTIIESHPDNTNPDLRLDKPWPSL 239
E+T + L+ LW+ IPLL CR+YG +G +R+ I EH +IESHPDN DLRLDKP+P L
Sbjct: 136 ESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNALEDLRLDKPFPEL 195
Query: 240 IQYVDSIDLDSLEVKDHMHIPYLVILYKYLKLWQSQNNTQDLPKNYKEKQNLRELIRSGI 299
++ S DLD +E KDH H P++VI+ KYL W S+ N + +PK YKEK++ R+LIR GI
Sbjct: 196 REHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGR-IPKTYKEKEDFRDLIRQGI 254
Query: 300 RKDENGIPLSEENFEEAMKAVNFALIPTTVPSSVARIRKDENGIPLSEENFEEAMKAVNF 359
K+ENG P EENFEEA+K VN AL T +PS
Sbjct: 255 LKNENGAPEDEENFEEAIKNVNTALNTTQIPS---------------------------- 286
Query: 360 ALIPTTVPSSVASILNDNACVNLTSKSEPFWILAKAVKDFVDNEGNGNLPLRGSLPDMTA 419
S+ I ND+ C+N+T ++ FWILA+A+K+FV EG GNLP+RG++PDM A
Sbjct: 287 ---------SIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVRGTIPDMIA 337
Query: 420 DTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIHVNE 479
D+ +YI LQ +YR++A +DA + +LL +GQ +I+E ++KL C N++F+ V
Sbjct: 338 DSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVR 397
Query: 480 SKLVLKLCDFG----------SASWSHENEITPYL----VSRFYR 510
+ + + ++G S+ + +NEI YL V RF++
Sbjct: 398 CRSLAE--EYGLDTINKDEIISSMDNPDNEIVLYLMLRAVDRFHK 440
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 72/114 (63%), Positives = 88/114 (77%)
Query: 1 LWGDHGQAALESARICLINATGLGTEILKSLVLPGVGSFTIIDGEKISEQDLGTNFFLDV 60
LWGDHGQ ALESA +CLINAT GTEILK+LVLPG+GSFTIIDG ++S +D G NFFL
Sbjct: 22 LWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQR 81
Query: 61 DSIGKSRAEVATQLLLELNPDCQGDFVDENPQVLMANDPNFFQSFHMVISTNCP 114
SIGK+RAE A + L ELN D G FV+E+P+ L+ NDP+FF F +V++T P
Sbjct: 82 SSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLP 135
>pdb|2NVU|A Chain A, Structure Of Appbp1-Uba3~nedd8-Nedd8-Mgatp-Ubc12(C111a), A
Trapped Ubiquitin-Like Protein Activation Complex
Length = 536
Score = 342 bits (878), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 166/358 (46%), Positives = 230/358 (64%), Gaps = 38/358 (10%)
Query: 120 SFFLDVDSIGKSRAEVATQLLLELNPDCQGDFVDENPQVLMANDPNFFQSFHMVISTNLP 179
+FFL SIGK+RAE A + L ELN D G FV+E+P+ L+ NDP+FF F +V++T LP
Sbjct: 75 NFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLP 134
Query: 180 ETTLIELSKTLWSLNIPLLACRSYGFIGSIRLQISEHTIIESHPDNTNPDLRLDKPWPSL 239
E+T + L+ LW+ IPLL CR+YG +G +R+ I EH +IESHPDN DLRLDKP+P L
Sbjct: 135 ESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNALEDLRLDKPFPEL 194
Query: 240 IQYVDSIDLDSLEVKDHMHIPYLVILYKYLKLWQSQNNTQDLPKNYKEKQNLRELIRSGI 299
++ S DLD +E KDH H P++VI+ KYL W S+ N + +PK YKEK++ R+LIR GI
Sbjct: 195 REHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGR-IPKTYKEKEDFRDLIRQGI 253
Query: 300 RKDENGIPLSEENFEEAMKAVNFALIPTTVPSSVARIRKDENGIPLSEENFEEAMKAVNF 359
K+ENG P EENFEEA+K VN AL T +PS
Sbjct: 254 LKNENGAPEDEENFEEAIKNVNTALNTTQIPS---------------------------- 285
Query: 360 ALIPTTVPSSVASILNDNACVNLTSKSEPFWILAKAVKDFVDNEGNGNLPLRGSLPDMTA 419
S+ I ND+ C+N+T ++ FWILA+A+K+FV EG GNLP+RG++PDM A
Sbjct: 286 ---------SIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVRGTIPDMIA 336
Query: 420 DTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIHV 477
D+ +YI LQ +YR++A +DA + +LL +GQ +I+E ++KL C N++F+ V
Sbjct: 337 DSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRV 394
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 72/114 (63%), Positives = 88/114 (77%)
Query: 1 LWGDHGQAALESARICLINATGLGTEILKSLVLPGVGSFTIIDGEKISEQDLGTNFFLDV 60
LWGDHGQ ALESA +CLINAT GTEILK+LVLPG+GSFTIIDG ++S +D G NFFL
Sbjct: 21 LWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQR 80
Query: 61 DSIGKSRAEVATQLLLELNPDCQGDFVDENPQVLMANDPNFFQSFHMVISTNCP 114
SIGK+RAE A + L ELN D G FV+E+P+ L+ NDP+FF F +V++T P
Sbjct: 81 SSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLP 134
>pdb|3GZN|A Chain A, Structure Of Nedd8-Activating Enzyme In Complex With Nedd8
And Mln4924
pdb|3GZN|C Chain C, Structure Of Nedd8-Activating Enzyme In Complex With Nedd8
And Mln4924
Length = 534
Score = 342 bits (878), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 166/358 (46%), Positives = 230/358 (64%), Gaps = 38/358 (10%)
Query: 120 SFFLDVDSIGKSRAEVATQLLLELNPDCQGDFVDENPQVLMANDPNFFQSFHMVISTNLP 179
+FFL SIGK+RAE A + L ELN D G FV+E+P+ L+ NDP+FF F +V++T LP
Sbjct: 73 NFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLP 132
Query: 180 ETTLIELSKTLWSLNIPLLACRSYGFIGSIRLQISEHTIIESHPDNTNPDLRLDKPWPSL 239
E+T + L+ LW+ IPLL CR+YG +G +R+ I EH +IESHPDN DLRLDKP+P L
Sbjct: 133 ESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNALEDLRLDKPFPEL 192
Query: 240 IQYVDSIDLDSLEVKDHMHIPYLVILYKYLKLWQSQNNTQDLPKNYKEKQNLRELIRSGI 299
++ S DLD +E KDH H P++VI+ KYL W S+ N + +PK YKEK++ R+LIR GI
Sbjct: 193 REHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGR-IPKTYKEKEDFRDLIRQGI 251
Query: 300 RKDENGIPLSEENFEEAMKAVNFALIPTTVPSSVARIRKDENGIPLSEENFEEAMKAVNF 359
K+ENG P EENFEEA+K VN AL T +PS
Sbjct: 252 LKNENGAPEDEENFEEAIKNVNTALNTTQIPS---------------------------- 283
Query: 360 ALIPTTVPSSVASILNDNACVNLTSKSEPFWILAKAVKDFVDNEGNGNLPLRGSLPDMTA 419
S+ I ND+ C+N+T ++ FWILA+A+K+FV EG GNLP+RG++PDM A
Sbjct: 284 ---------SIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVRGTIPDMIA 334
Query: 420 DTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIHV 477
D+ +YI LQ +YR++A +DA + +LL +GQ +I+E ++KL C N++F+ V
Sbjct: 335 DSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRV 392
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 72/114 (63%), Positives = 88/114 (77%)
Query: 1 LWGDHGQAALESARICLINATGLGTEILKSLVLPGVGSFTIIDGEKISEQDLGTNFFLDV 60
LWGDHGQ ALESA +CLINAT GTEILK+LVLPG+GSFTIIDG ++S +D G NFFL
Sbjct: 19 LWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQR 78
Query: 61 DSIGKSRAEVATQLLLELNPDCQGDFVDENPQVLMANDPNFFQSFHMVISTNCP 114
SIGK+RAE A + L ELN D G FV+E+P+ L+ NDP+FF F +V++T P
Sbjct: 79 SSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLP 132
>pdb|1TT5|A Chain A, Structure Of Appbp1-Uba3-Ubc12n26: A Unique E1-E2
Interaction Required For Optimal Conjugation Of The
Ubiquitin-Like Protein Nedd8
pdb|1TT5|C Chain C, Structure Of Appbp1-Uba3-Ubc12n26: A Unique E1-E2
Interaction Required For Optimal Conjugation Of The
Ubiquitin-Like Protein Nedd8
pdb|3DBH|A Chain A, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190ala-Nedd8ala72arg)
pdb|3DBH|C Chain C, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190ala-Nedd8ala72arg)
pdb|3DBH|E Chain E, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190ala-Nedd8ala72arg)
pdb|3DBH|G Chain G, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190ala-Nedd8ala72arg)
pdb|3DBL|A Chain A, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190wt-Nedd8ala72gln)
pdb|3DBL|C Chain C, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190wt-Nedd8ala72gln)
pdb|3DBL|E Chain E, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190wt-Nedd8ala72gln)
pdb|3DBL|G Chain G, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190wt-Nedd8ala72gln)
pdb|3DBR|A Chain A, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190gln-Nedd8ala72arg)
pdb|3DBR|C Chain C, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190gln-Nedd8ala72arg)
pdb|3DBR|E Chain E, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190gln-Nedd8ala72arg)
pdb|3DBR|G Chain G, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190gln-Nedd8ala72arg)
Length = 531
Score = 334 bits (856), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 163/358 (45%), Positives = 226/358 (63%), Gaps = 43/358 (12%)
Query: 120 SFFLDVDSIGKSRAEVATQLLLELNPDCQGDFVDENPQVLMANDPNFFQSFHMVISTNLP 179
+FFL SIGK+RAE A + L ELN D G FV+E+P+ L+ NDP+FF F +V++T LP
Sbjct: 75 NFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLP 134
Query: 180 ETTLIELSKTLWSLNIPLLACRSYGFIGSIRLQISEHTIIESHPDNTNPDLRLDKPWPSL 239
E+T + L+ LW+ IPLL CR+YG +G +R+ I EH +IESHPDN DLRLDKP+P L
Sbjct: 135 ESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNALEDLRLDKPFPEL 194
Query: 240 IQYVDSIDLDSLEVKDHMHIPYLVILYKYLKLWQSQNNTQDLPKNYKEKQNLRELIRSGI 299
++ S DLD +E KDH H P++VI+ KYL W S+ N + +PK YKEK++ R+LIR GI
Sbjct: 195 REHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGR-IPKTYKEKEDFRDLIRQGI 253
Query: 300 RKDENGIPLSEENFEEAMKAVNFALIPTTVPSSVARIRKDENGIPLSEENFEEAMKAVNF 359
K P EENFEEA+K VN
Sbjct: 254 LK------------------------------------------PEDEENFEEAIKNVNT 271
Query: 360 ALIPTTVPSSVASILNDNACVNLTSKSEPFWILAKAVKDFVDNEGNGNLPLRGSLPDMTA 419
AL T +PSS+ I ND+ C+N+T ++ FWILA+A+K+FV EG GNLP+RG++PDM A
Sbjct: 272 ALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVRGTIPDMIA 331
Query: 420 DTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIHV 477
D+ +YI LQ +YR++A +DA + +LL +GQ +I+E ++KL C N++F+ V
Sbjct: 332 DSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRV 389
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 72/114 (63%), Positives = 88/114 (77%)
Query: 1 LWGDHGQAALESARICLINATGLGTEILKSLVLPGVGSFTIIDGEKISEQDLGTNFFLDV 60
LWGDHGQ ALESA +CLINAT GTEILK+LVLPG+GSFTIIDG ++S +D G NFFL
Sbjct: 21 LWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQR 80
Query: 61 DSIGKSRAEVATQLLLELNPDCQGDFVDENPQVLMANDPNFFQSFHMVISTNCP 114
SIGK+RAE A + L ELN D G FV+E+P+ L+ NDP+FF F +V++T P
Sbjct: 81 SSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLP 134
>pdb|1R4M|A Chain A, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
pdb|1R4M|C Chain C, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
pdb|1R4M|E Chain E, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
pdb|1R4M|G Chain G, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
pdb|1R4N|A Chain A, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
With Atp
pdb|1R4N|C Chain C, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
With Atp
pdb|1R4N|E Chain E, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
With Atp
pdb|1R4N|G Chain G, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
With Atp
Length = 529
Score = 330 bits (845), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/405 (42%), Positives = 246/405 (60%), Gaps = 59/405 (14%)
Query: 120 SFFLDVDSIGKSRAEVATQLLLELNPDCQGDFVDENPQVLMANDPNFFQSFHMVISTNLP 179
+FFL SIGK+RAE A + L ELN D G FV+E+P+ L+ NDP+FF F +V++T LP
Sbjct: 73 NFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLP 132
Query: 180 ETTLIELSKTLWSLNIPLLACRSYGFIGSIRLQISEHTIIESHPDNTNPDLRLDKPWPSL 239
E+T + L+ LW+ IPLL CR+YG +G +R+ I EH +IESHPDN DLRLDKP+P L
Sbjct: 133 ESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNALEDLRLDKPFPEL 192
Query: 240 IQYVDSIDLDSLEVKDHMHIPYLVILYKYLKLWQSQNNTQDLPKNYKEKQNLRELIRSGI 299
++ S DLD +E KDH H P++VI+ KYL W S+ N + +PK YKEK++ R+LIR GI
Sbjct: 193 REHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGR-IPKTYKEKEDFRDLIRQGI 251
Query: 300 RKDENGIPLSEENFEEAMKAVNFALIPTTVPSSVARIRKDENGIPLSEENFEEAMKAVNF 359
K P EENFEEA+K VN AL T +PS
Sbjct: 252 LK-----PEDEENFEEAIKNVNTALNTTQIPS---------------------------- 278
Query: 360 ALIPTTVPSSVASILNDNACVNLTSKSEPFWILAKAVKDFVDNEGNGNLPLRGSLPDMTA 419
S+ I ND+ C+N+T ++ FWILA+A+K+FV EG GNLP+RG++PDM A
Sbjct: 279 ---------SIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVRGTIPDMIA 329
Query: 420 DTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIHVNE 479
D+ +YI LQ +YR++A +DA + +LL +GQ +I+E ++KL C N++F+ V
Sbjct: 330 DSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVR 389
Query: 480 SKLVLKLCDFG----------SASWSHENEITPYL----VSRFYR 510
+ + + ++G S+ + +NEI YL V RF++
Sbjct: 390 CRSLAE--EYGLDTINKDEIISSMDNPDNEIVLYLMLRAVDRFHK 432
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 72/114 (63%), Positives = 88/114 (77%)
Query: 1 LWGDHGQAALESARICLINATGLGTEILKSLVLPGVGSFTIIDGEKISEQDLGTNFFLDV 60
LWGDHGQ ALESA +CLINAT GTEILK+LVLPG+GSFTIIDG ++S +D G NFFL
Sbjct: 19 LWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQR 78
Query: 61 DSIGKSRAEVATQLLLELNPDCQGDFVDENPQVLMANDPNFFQSFHMVISTNCP 114
SIGK+RAE A + L ELN D G FV+E+P+ L+ NDP+FF F +V++T P
Sbjct: 79 SSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLP 132
>pdb|1Y8Q|A Chain A, Sumo E1 Activating Enzyme Sae1-Sae2-Mg-Atp Complex
pdb|1Y8Q|C Chain C, Sumo E1 Activating Enzyme Sae1-Sae2-Mg-Atp Complex
pdb|1Y8R|A Chain A, Sumo E1 Activating Enzyme Sae1-Sae2-Sumo1-Mg-Atp Complex
pdb|1Y8R|D Chain D, Sumo E1 Activating Enzyme Sae1-Sae2-Sumo1-Mg-Atp Complex
pdb|3KYC|A Chain A, Human Sumo E1 Complex With A Sumo1-Amp Mimic
pdb|3KYD|A Chain A, Human Sumo E1~sumo1-amp Tetrahedral Intermediate Mimic
Length = 346
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 11/117 (9%)
Query: 1 LWGDHGQAALESARICLINATGLGTEILKSLVLPGVGSFTIIDGEKISEQDLGTNFFLDV 60
LWG Q L ++R+ L+ GLG EI K+L+L GV T++D E+++ +D G F +
Sbjct: 25 LWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRT 84
Query: 61 DSIGKSRAEVATQLLLELNP--DCQGDF--VDENPQVLMANDPNFFQSFHMVISTNC 113
S+G++RAE + + LNP D + D +++ P+ +FF F V T C
Sbjct: 85 GSVGRNRAEASLERAQNLNPMVDVKVDTEDIEKKPE-------SFFTQFDAVCLTCC 134
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 11/104 (10%)
Query: 121 FFLDVDSIGKSRAEVATQLLLELNP--DCQGDF--VDENPQVLMANDPNFFQSFHMVIST 176
F + S+G++RAE + + LNP D + D +++ P+ +FF F V T
Sbjct: 80 FLIRTGSVGRNRAEASLERAQNLNPMVDVKVDTEDIEKKPE-------SFFTQFDAVCLT 132
Query: 177 NLPETTLIELSKTLWSLNIPLLACRSYGFIGSIRLQISEHTIIE 220
++++ + +I +G+ G + EH +E
Sbjct: 133 CCSRDVIVKVDQICHKNSIKFFTGDVFGYHGYTFANLGEHEFVE 176
>pdb|1R4M|B Chain B, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
pdb|1R4M|D Chain D, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
pdb|1R4M|F Chain F, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
pdb|1R4M|H Chain H, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
pdb|1R4N|B Chain B, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
With Atp
pdb|1R4N|D Chain D, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
With Atp
pdb|1R4N|F Chain F, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
With Atp
pdb|1R4N|H Chain H, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
With Atp
Length = 431
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 7 QAALESARICLINATGLGTEILKSLVLPGVGSFTIIDGEKISEQDLGTNFFLDVDSIGKS 66
Q L++ ++ +I A GLG E+LK+L L G +ID + I +L F IG+
Sbjct: 32 QFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRP 91
Query: 67 RAEVATQLLLELNPDCQGDFVDENPQVLMANDPNFFQSFHMVI 109
+AEVA + L + P+C + V ++ ND F++ FH+++
Sbjct: 92 KAEVAAEFLNDRVPNC--NVVPHFNKIQDFND-TFYRQFHIIV 131
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 121 FFLDVDSIGKSRAEVATQLLLELNPDCQGDFVDENPQVLMANDPNFFQSFHMVI 174
F IG+ +AEVA + L + P+C + V ++ ND F++ FH+++
Sbjct: 81 FLFRPKDIGRPKAEVAAEFLNDRVPNC--NVVPHFNKIQDFND-TFYRQFHIIV 131
>pdb|1TT5|B Chain B, Structure Of Appbp1-Uba3-Ubc12n26: A Unique E1-E2
Interaction Required For Optimal Conjugation Of The
Ubiquitin-Like Protein Nedd8
pdb|1TT5|D Chain D, Structure Of Appbp1-Uba3-Ubc12n26: A Unique E1-E2
Interaction Required For Optimal Conjugation Of The
Ubiquitin-Like Protein Nedd8
Length = 434
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 7 QAALESARICLINATGLGTEILKSLVLPGVGSFTIIDGEKISEQDLGTNFFLDVDSIGKS 66
Q L++ ++ +I A GLG E+LK+L L G +ID + I +L F IG+
Sbjct: 35 QFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRP 94
Query: 67 RAEVATQLLLELNPDCQGDFVDENPQVLMANDPNFFQSFHMVI 109
+AEVA + L + P+C + V ++ ND F++ FH+++
Sbjct: 95 KAEVAAEFLNDRVPNC--NVVPHFNKIQDFND-TFYRQFHIIV 134
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 121 FFLDVDSIGKSRAEVATQLLLELNPDCQGDFVDENPQVLMANDPNFFQSFHMVI 174
F IG+ +AEVA + L + P+C + V ++ ND F++ FH+++
Sbjct: 84 FLFRPKDIGRPKAEVAAEFLNDRVPNC--NVVPHFNKIQDFND-TFYRQFHIIV 134
>pdb|2NVU|B Chain B, Structure Of Appbp1-Uba3~nedd8-Nedd8-Mgatp-Ubc12(C111a), A
Trapped Ubiquitin-Like Protein Activation Complex
Length = 805
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 7 QAALESARICLINATGLGTEILKSLVLPGVGSFTIIDGEKISEQDLGTNFFLDVDSIGKS 66
Q L++ ++ +I A GLG E+LK+L L G +ID + I +L F IG+
Sbjct: 406 QFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRP 465
Query: 67 RAEVATQLLLELNPDCQGDFVDENPQVLMANDPNFFQSFHMVI 109
+AEVA + L + P+C + V ++ ND F++ FH+++
Sbjct: 466 KAEVAAEFLNDRVPNC--NVVPHFNKIQDFND-TFYRQFHIIV 505
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 102 FQSFHMVISTNCPILSL-PSFFLDVDSIGKSRAEVATQLLLELNPDCQGDFVDENPQVLM 160
F+ H++ + +L F IG+ +AEVA + L + P+C + V ++
Sbjct: 435 FRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNC--NVVPHFNKIQD 492
Query: 161 ANDPNFFQSFHMVI 174
ND F++ FH+++
Sbjct: 493 FND-TFYRQFHIIV 505
>pdb|3DBL|B Chain B, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190wt-Nedd8ala72gln)
pdb|3DBL|D Chain D, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190wt-Nedd8ala72gln)
pdb|3DBL|F Chain F, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190wt-Nedd8ala72gln)
pdb|3DBL|H Chain H, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190wt-Nedd8ala72gln)
Length = 434
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 7 QAALESARICLINATGLGTEILKSLVLPGVGSFTIIDGEKISEQDLGTNFFLDVDSIGKS 66
Q L++ ++ +I A GLG E+LK+L L G +ID + I +L F IG+
Sbjct: 35 QFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRP 94
Query: 67 RAEVATQLLLELNPDCQGDFVDENPQVLMANDPNFFQSFHMVI 109
+AEVA + L + P+C + V ++ ND F++ FH+++
Sbjct: 95 KAEVAAEFLNDRVPNC--NVVPHFNKIQDFND-TFYRQFHIIV 134
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 121 FFLDVDSIGKSRAEVATQLLLELNPDCQGDFVDENPQVLMANDPNFFQSFHMVI 174
F IG+ +AEVA + L + P+C + V ++ ND F++ FH+++
Sbjct: 84 FLFRPKDIGRPKAEVAAEFLNDRVPNC--NVVPHFNKIQDFND-TFYRQFHIIV 134
>pdb|3DBH|B Chain B, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190ala-Nedd8ala72arg)
pdb|3DBH|D Chain D, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190ala-Nedd8ala72arg)
pdb|3DBH|F Chain F, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190ala-Nedd8ala72arg)
pdb|3DBH|H Chain H, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190ala-Nedd8ala72arg)
Length = 434
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 7 QAALESARICLINATGLGTEILKSLVLPGVGSFTIIDGEKISEQDLGTNFFLDVDSIGKS 66
Q L++ ++ +I A GLG E+LK+L L G +ID + I +L F IG+
Sbjct: 35 QFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRP 94
Query: 67 RAEVATQLLLELNPDCQGDFVDENPQVLMANDPNFFQSFHMVI 109
+AEVA + L + P+C + V ++ ND F++ FH+++
Sbjct: 95 KAEVAAEFLNDRVPNC--NVVPHFNKIQDFND-TFYRQFHIIV 134
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 121 FFLDVDSIGKSRAEVATQLLLELNPDCQGDFVDENPQVLMANDPNFFQSFHMVI 174
F IG+ +AEVA + L + P+C + V ++ ND F++ FH+++
Sbjct: 84 FLFRPKDIGRPKAEVAAEFLNDRVPNC--NVVPHFNKIQDFND-TFYRQFHIIV 134
>pdb|3DBR|B Chain B, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190gln-Nedd8ala72arg)
pdb|3DBR|D Chain D, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190gln-Nedd8ala72arg)
pdb|3DBR|F Chain F, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190gln-Nedd8ala72arg)
pdb|3DBR|H Chain H, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190gln-Nedd8ala72arg)
Length = 434
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 7 QAALESARICLINATGLGTEILKSLVLPGVGSFTIIDGEKISEQDLGTNFFLDVDSIGKS 66
Q L++ ++ +I A GLG E+LK+L L G +ID + I +L F IG+
Sbjct: 35 QFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRP 94
Query: 67 RAEVATQLLLELNPDCQGDFVDENPQVLMANDPNFFQSFHMVI 109
+AEVA + L + P+C + V ++ ND F++ FH+++
Sbjct: 95 KAEVAAEFLNDRVPNC--NVVPHFNKIQDFND-TFYRQFHIIV 134
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 121 FFLDVDSIGKSRAEVATQLLLELNPDCQGDFVDENPQVLMANDPNFFQSFHMVI 174
F IG+ +AEVA + L + P+C + V ++ ND F++ FH+++
Sbjct: 84 FLFRPKDIGRPKAEVAAEFLNDRVPNC--NVVPHFNKIQDFND-TFYRQFHIIV 134
>pdb|3GZN|B Chain B, Structure Of Nedd8-Activating Enzyme In Complex With Nedd8
And Mln4924
pdb|3GZN|D Chain D, Structure Of Nedd8-Activating Enzyme In Complex With Nedd8
And Mln4924
Length = 463
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 7 QAALESARICLINATGLGTEILKSLVLPGVGSFTIIDGEKISEQDLGTNFFLDVDSIGKS 66
Q L++ ++ +I A GLG E+LK+L L G +ID + I +L F IG+
Sbjct: 64 QFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRP 123
Query: 67 RAEVATQLLLELNPDCQGDFVDENPQVLMANDPNFFQSFHMVI 109
+AEVA + L + P+C + V ++ ND F++ FH+++
Sbjct: 124 KAEVAAEFLNDRVPNC--NVVPHFNKIQDFND-TFYRQFHIIV 163
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 121 FFLDVDSIGKSRAEVATQLLLELNPDCQGDFVDENPQVLMANDPNFFQSFHMVI 174
F IG+ +AEVA + L + P+C + V ++ ND F++ FH+++
Sbjct: 113 FLFRPKDIGRPKAEVAAEFLNDRVPNC--NVVPHFNKIQDFND-TFYRQFHIIV 163
>pdb|3CMM|A Chain A, Crystal Structure Of The Uba1-Ubiquitin Complex
pdb|3CMM|C Chain C, Crystal Structure Of The Uba1-Ubiquitin Complex
Length = 1015
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 1 LWGDHGQAALESARICLINATGLGTEILKSLVLPGVGSFTIIDGEKISEQDLGTNFFLDV 60
+ G ++++ + ++ GLG EI K++VL GV S T+ D E + DL T FFL
Sbjct: 16 VLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGVKSMTVFDPEPVQLADLSTQFFLTE 75
Query: 61 DSIGKSRAEVATQLLLELN 79
IG+ R +V L ELN
Sbjct: 76 KDIGQKRGDVTRAKLAELN 94
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 1 LWGDHGQAALESARICLINATGLGTEILKSLVLPGVGS-----FTIIDGEKISEQDLGTN 55
++G Q + ++++ L+ + +G E+LK+ L G+GS + D + I + +L
Sbjct: 414 VFGLDFQKKIANSKVFLVGSGAIGCEMLKNWALLGLGSGSDGYIVVTDNDSIEKSNLNRQ 473
Query: 56 FFLDVDSIGKSRAEVATQLLLELNPDCQG 84
F +GK+++EVA + + +NPD +G
Sbjct: 474 FLFRPKDVGKNKSEVAAEAVCAMNPDLKG 502
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 10/114 (8%)
Query: 121 FFLDVDSIGKSRAEVATQLLLELNPDCQGDF---VDE-NPQVLMANDPNFFQSFHMVIST 176
F +GK+++EVA + + +NPD +G +D+ P+ + +F++S V +
Sbjct: 474 FLFRPKDVGKNKSEVAAEAVCAMNPDLKGKINAKIDKVGPETEEIFNDSFWESLDFVTNA 533
Query: 177 --NLPETTLIELSKTLWSLNIPLLACRSYGFIGSIRLQISEHTIIESHPDNTNP 228
N+ T ++ + PLL + G G+ ++ I T ES+ + +P
Sbjct: 534 LDNVDARTYVDRRCVFYRK--PLLESGTLGTKGNTQVIIPRLT--ESYSSSRDP 583
>pdb|1YOV|B Chain B, Insights Into The Ubiquitin Transfer Cascade From The
Refined Structure Of The Activating Enzyme For Nedd8
pdb|1YOV|D Chain D, Insights Into The Ubiquitin Transfer Cascade From The
Refined Structure Of The Activating Enzyme For Nedd8
Length = 444
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 7 QAALESARICLINATGLGTEILKSLVLPGVGSFTIIDGEKISEQDLGTNFFLDVDSIGKS 66
Q L++ ++ +I A GLG E+LK+L L G +ID + I +L F IG+
Sbjct: 45 QFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRP 104
Query: 67 RAEVATQLLLELNPDCQGDFVDENPQVLMANDPNFFQSFHMVI 109
+AEVA + L + P+C + V ++ ND F++ FH+++
Sbjct: 105 KAEVAAEFLNDRVPNC--NVVPHFNKIQDFND-TFYRQFHIIV 144
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 121 FFLDVDSIGKSRAEVATQLLLELNPDCQGDFVDENPQVLMANDPNFFQSFHMVI 174
F IG+ +AEVA + L + P+C + V ++ ND F++ FH+++
Sbjct: 94 FLFRPKDIGRPKAEVAAEFLNDRVPNC--NVVPHFNKIQDFND-TFYRQFHIIV 144
>pdb|4II2|A Chain A, Crystal Structure Of Ubiquitin Activating Enzyme 1 (uba1)
In Complex With The Ub E2 Ubc4, Ubiquitin, And Atp/mg
pdb|4II3|A Chain A, Crystal Structure Of S. Pombe Ubiquitin Activating Enzyme
1 (uba1) In Complex With Ubiquitin And Atp/mg
pdb|4II3|C Chain C, Crystal Structure Of S. Pombe Ubiquitin Activating Enzyme
1 (uba1) In Complex With Ubiquitin And Atp/mg
Length = 1001
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%)
Query: 1 LWGDHGQAALESARICLINATGLGTEILKSLVLPGVGSFTIIDGEKISEQDLGTNFFLDV 60
+ G + + + +I GLG EI K++ L GV S T+ D + +DL + +FL
Sbjct: 15 VLGHEAMKQMSQSNVLIIGCKGLGVEIAKNVCLAGVKSVTLYDPQPTRIEDLSSQYFLTE 74
Query: 61 DSIGKSRAEVATQLLLELNPDCQGDFVDE 89
D IG RA+V L ELN VDE
Sbjct: 75 DDIGVPRAKVTVSKLAELNQYVPVSVVDE 103
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Query: 1 LWGDHGQAALESARICLINATGLGTEILKSLVLPGV-----GSFTIIDGEKISEQDLGTN 55
++G Q + S L+ A +G E+LK+ + GV G ++ D + I + +L
Sbjct: 405 VFGSEFQEKIASLSTFLVGAGAIGCEMLKNWAMMGVATGESGHISVTDMDSIEKSNLNRQ 464
Query: 56 FFLDVDSIGKSRAEVATQLLLELNPDCQGDFVDENPQV 93
F +GK ++E A+ + +NP G +V
Sbjct: 465 FLFRPRDVGKLKSECASTAVSIMNPSLTGKITSYQERV 502
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 7/98 (7%)
Query: 121 FFLDVDSIGKSRAEVATQLLLELNPDCQGDFVDENPQVLMANDPNFFQSFHMVISTNLPE 180
+FL D IG RA+V L ELN VDE + ++F V+ T
Sbjct: 70 YFLTEDDIGVPRAKVTVSKLAELNQYVPVSVVDE-------LSTEYLKNFKCVVVTETSL 122
Query: 181 TTLIELSKTLWSLNIPLLACRSYGFIGSIRLQISEHTI 218
T +E++ +I +A S G GSI E+ I
Sbjct: 123 TKQLEINDFTHKNHIAYIAADSRGLFGSIFCDFGENFI 160
>pdb|3KYD|B Chain B, Human Sumo E1~sumo1-amp Tetrahedral Intermediate Mimic
Length = 551
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 9 ALESARICLINATGLGTEILKSLVLPGVGSFTIIDGEKISEQDLGTNFFLDVDSIGKSRA 68
A+ R+ ++ A G+G E+LK+LVL G +ID + I +L F +G+S+A
Sbjct: 16 AVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKA 75
Query: 69 EVATQLLLELNPDCQGDFVDENPQVLMAN-DPNFFQSFHMVIST 111
+VA + +L+ P + + V + ++ + + FF+ F +V++
Sbjct: 76 QVAKESVLQFYP--KANIVAYHDSIMNPDYNVEFFRQFILVMNA 117
>pdb|1Y8Q|B Chain B, Sumo E1 Activating Enzyme Sae1-Sae2-Mg-Atp Complex
pdb|1Y8Q|D Chain D, Sumo E1 Activating Enzyme Sae1-Sae2-Mg-Atp Complex
pdb|1Y8R|B Chain B, Sumo E1 Activating Enzyme Sae1-Sae2-Sumo1-Mg-Atp Complex
pdb|1Y8R|E Chain E, Sumo E1 Activating Enzyme Sae1-Sae2-Sumo1-Mg-Atp Complex
Length = 640
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 9 ALESARICLINATGLGTEILKSLVLPGVGSFTIIDGEKISEQDLGTNFFLDVDSIGKSRA 68
A+ R+ ++ A G+G E+LK+LVL G +ID + I +L F +G+S+A
Sbjct: 14 AVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKA 73
Query: 69 EVATQLLLELNPDCQGDFVDENPQVLMAN-DPNFFQSFHMVIST 111
+VA + +L+ P + + V + ++ + + FF+ F +V++
Sbjct: 74 QVAKESVLQFYP--KANIVAYHDSIMNPDYNVEFFRQFILVMNA 115
>pdb|3KYC|B Chain B, Human Sumo E1 Complex With A Sumo1-Amp Mimic
Length = 660
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 9 ALESARICLINATGLGTEILKSLVLPGVGSFTIIDGEKISEQDLGTNFFLDVDSIGKSRA 68
A+ R+ ++ A G+G E+LK+LVL G +ID + I +L F +G+S+A
Sbjct: 34 AVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKA 93
Query: 69 EVATQLLLELNPDCQGDFVDENPQVLMAN-DPNFFQSFHMVIST 111
+VA + +L+ P + + V + ++ + + FF+ F +V++
Sbjct: 94 QVAKESVLQFYP--KANIVAYHDSIMNPDYNVEFFRQFILVMNA 135
>pdb|3H5N|A Chain A, Crystal Structure Of E. Coli Mccb + Atp
pdb|3H5N|B Chain B, Crystal Structure Of E. Coli Mccb + Atp
pdb|3H5N|C Chain C, Crystal Structure Of E. Coli Mccb + Atp
pdb|3H5N|D Chain D, Crystal Structure Of E. Coli Mccb + Atp
pdb|3H5R|A Chain A, Crystal Structure Of E. Coli Mccb + Succinimide
pdb|3H5R|B Chain B, Crystal Structure Of E. Coli Mccb + Succinimide
pdb|3H5R|C Chain C, Crystal Structure Of E. Coli Mccb + Succinimide
pdb|3H5R|D Chain D, Crystal Structure Of E. Coli Mccb + Succinimide
pdb|3H9G|A Chain A, Crystal Structure Of E. Coli Mccb + Mcca-N7isoasn
pdb|3H9G|B Chain B, Crystal Structure Of E. Coli Mccb + Mcca-N7isoasn
pdb|3H9G|C Chain C, Crystal Structure Of E. Coli Mccb + Mcca-N7isoasn
pdb|3H9G|D Chain D, Crystal Structure Of E. Coli Mccb + Mcca-N7isoasn
pdb|3H9J|A Chain A, Crystal Structure Of E. Coli Mccb + Ampcpp + Semet Mcca
pdb|3H9J|B Chain B, Crystal Structure Of E. Coli Mccb + Ampcpp + Semet Mcca
pdb|3H9J|C Chain C, Crystal Structure Of E. Coli Mccb + Ampcpp + Semet Mcca
pdb|3H9J|D Chain D, Crystal Structure Of E. Coli Mccb + Ampcpp + Semet Mcca
pdb|3H9Q|A Chain A, Crystal Structure Of E. Coli Mccb + Semet Mcca
pdb|3H9Q|B Chain B, Crystal Structure Of E. Coli Mccb + Semet Mcca
pdb|3H9Q|C Chain C, Crystal Structure Of E. Coli Mccb + Semet Mcca
pdb|3H9Q|D Chain D, Crystal Structure Of E. Coli Mccb + Semet Mcca
Length = 353
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 7 QAALESARICLINATGLGTEILKSLVLPGVGSFTIIDGEKISEQDLGTNFFLDVDSIGKS 66
Q L++A++ ++ G+G + L G+G +ID ++I +L D +GK+
Sbjct: 113 QDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKN 172
Query: 67 RAEVATQLLLELNPD 81
+ EV + LL+ N +
Sbjct: 173 KTEVIKRELLKRNSE 187
>pdb|3H5A|A Chain A, Crystal Structure Of E. Coli Mccb
pdb|3H5A|B Chain B, Crystal Structure Of E. Coli Mccb
pdb|3H5A|C Chain C, Crystal Structure Of E. Coli Mccb
pdb|3H5A|D Chain D, Crystal Structure Of E. Coli Mccb
Length = 358
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 7 QAALESARICLINATGLGTEILKSLVLPGVGSFTIIDGEKISEQDLGTNFFLDVDSIGKS 66
Q L++A++ ++ G+G + L G+G +ID ++I +L D +GK+
Sbjct: 110 QDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKN 169
Query: 67 RAEVATQLLLELNPD 81
+ EV + LL+ N +
Sbjct: 170 KTEVIKRELLKRNSE 184
>pdb|1ZUD|1 Chain 1, Structure Of This-Thif Protein Complex
pdb|1ZUD|3 Chain 3, Structure Of This-Thif Protein Complex
Length = 251
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 6 GQAALESARICLINATGLGTEILKSLVLPGVGSFTIIDGEKISEQDLGTNFFLDVDSIGK 65
GQ L +++ +I GLGT L GVG+ + D + + +L + I +
Sbjct: 22 GQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDR 81
Query: 66 SRAEVATQLLLELNPDCQ 83
+++V+ Q L +LNPD Q
Sbjct: 82 PKSQVSQQRLTQLNPDIQ 99
>pdb|1ZFN|A Chain A, Structural Analysis Of Escherichia Coli Thif
pdb|1ZFN|B Chain B, Structural Analysis Of Escherichia Coli Thif
pdb|1ZFN|C Chain C, Structural Analysis Of Escherichia Coli Thif
pdb|1ZFN|D Chain D, Structural Analysis Of Escherichia Coli Thif
pdb|1ZKM|A Chain A, Structural Analysis Of Escherichia Coli Thif
pdb|1ZKM|B Chain B, Structural Analysis Of Escherichia Coli Thif
pdb|1ZKM|C Chain C, Structural Analysis Of Escherichia Coli Thif
pdb|1ZKM|D Chain D, Structural Analysis Of Escherichia Coli Thif
Length = 253
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 6 GQAALESARICLINATGLGTEILKSLVLPGVGSFTIIDGEKISEQDLGTNFFLDVDSIGK 65
GQ L +++ +I GLGT L GVG+ + D + + +L + I +
Sbjct: 24 GQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDR 83
Query: 66 SRAEVATQLLLELNPDCQ 83
+++V+ Q L +LNPD Q
Sbjct: 84 PKSQVSQQRLTQLNPDIQ 101
>pdb|1JWB|B Chain B, Structure Of The Covalent Acyl-Adenylate Form Of The
Moeb-Moad Protein Complex
pdb|1JWA|B Chain B, Structure Of The Atp-Bound Moeb-Moad Protein Complex
pdb|1JW9|B Chain B, Structure Of The Native Moeb-Moad Protein Complex
Length = 249
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 6 GQAALESARICLINATGLGTEILKSLVLPGVGSFTIIDGEKISEQDLGTNFFLDVDSIGK 65
GQ AL+ +R+ ++ GLG + L GVG+ T++D + +S +L ++G+
Sbjct: 25 GQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQ 84
Query: 66 SRAEVATQLLLELNP 80
+ E A L +NP
Sbjct: 85 PKVESARDALTRINP 99
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHENEI-TPYLVSRFYRAP 512
VNE+ LKLCDFGSA +E Y+ SR+YRAP
Sbjct: 164 VNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAP 200
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + N +TPY+V+R+YRAP
Sbjct: 156 VVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAP 192
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 21/168 (12%)
Query: 355 KAVNFALIPTTVPSSVASILNDNACVNLTSKS---EPFWILAKAVKDFVDNEGNGNLPLR 411
K V I T P SV L + + + F IL + D+ G+
Sbjct: 37 KRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS------ 90
Query: 412 GSLPDMTADTTRYIALQQLYRDQAG--RDADVIYRRAQQLLHQLGQPSSAITEAQVKLFC 469
+T + YI + + D A ++ A+ ++QL + I A V
Sbjct: 91 -----LTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRD 145
Query: 470 RNASFIHVNESKLVLKLCDFGSA-----SWSHENEITPYLVSRFYRAP 512
+ + +N LVLK+ DFG A +SH+ ++ LV+++YR+P
Sbjct: 146 LKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSP 193
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 22/86 (25%)
Query: 443 YRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH---------------VNESKLVLKLC 487
Y RA+Q L P + +LF R+ ++IH ++ VLKLC
Sbjct: 112 YSRAKQTL-----PVIYVKLYMYQLF-RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC 165
Query: 488 DFGSASWSHENEI-TPYLVSRFYRAP 512
DFGSA E Y+ SR+YRAP
Sbjct: 166 DFGSAKQLVRGEPNVSYICSRYYRAP 191
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 22/86 (25%)
Query: 443 YRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH---------------VNESKLVLKLC 487
Y RA+Q L P + +LF R+ ++IH ++ VLKLC
Sbjct: 112 YSRAKQTL-----PVIYVKLYMYQLF-RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC 165
Query: 488 DFGSASWSHENEI-TPYLVSRFYRAP 512
DFGSA E Y+ SR+YRAP
Sbjct: 166 DFGSAKQLVRGEPNVSYICSRYYRAP 191
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 22/86 (25%)
Query: 443 YRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH---------------VNESKLVLKLC 487
Y RA+Q L P + +LF R+ ++IH ++ VLKLC
Sbjct: 117 YSRAKQTL-----PVIYVKLYMYQLF-RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC 170
Query: 488 DFGSASWSHENEI-TPYLVSRFYRAP 512
DFGSA E Y+ SR+YRAP
Sbjct: 171 DFGSAKQLVRGEPNVSYICSRYYRAP 196
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 22/86 (25%)
Query: 443 YRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH---------------VNESKLVLKLC 487
Y RA+Q L P + +LF R+ ++IH ++ VLKLC
Sbjct: 148 YSRAKQTL-----PVIYVKLYMYQLF-RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC 201
Query: 488 DFGSASWSHENEI-TPYLVSRFYRAP 512
DFGSA E Y+ SR+YRAP
Sbjct: 202 DFGSAKQLVRGEPNVSYICSRYYRAP 227
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 22/86 (25%)
Query: 443 YRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH---------------VNESKLVLKLC 487
Y RA+Q L P + +LF R+ ++IH ++ VLKLC
Sbjct: 125 YSRAKQTL-----PVIYVKLYMYQLF-RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC 178
Query: 488 DFGSASWSHENEI-TPYLVSRFYRAP 512
DFGSA E Y+ SR+YRAP
Sbjct: 179 DFGSAKQLVRGEPNVSYICSRYYRAP 204
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 22/86 (25%)
Query: 443 YRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH---------------VNESKLVLKLC 487
Y RA+Q L P + +LF R+ ++IH ++ VLKLC
Sbjct: 146 YSRAKQTL-----PVIYVKLYMYQLF-RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC 199
Query: 488 DFGSASWSHENEI-TPYLVSRFYRAP 512
DFGSA E Y+ SR+YRAP
Sbjct: 200 DFGSAKQLVRGEPNVSYICSRYYRAP 225
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 22/86 (25%)
Query: 443 YRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH---------------VNESKLVLKLC 487
Y RA+Q L P + +LF R+ ++IH ++ VLKLC
Sbjct: 140 YSRAKQTL-----PVIYVKLYMYQLF-RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC 193
Query: 488 DFGSASWSHENEI-TPYLVSRFYRAP 512
DFGSA E Y+ SR+YRAP
Sbjct: 194 DFGSAKQLVRGEPNVSYICSRYYRAP 219
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 22/86 (25%)
Query: 443 YRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH---------------VNESKLVLKLC 487
Y RA+Q L P + +LF R+ ++IH ++ VLKLC
Sbjct: 191 YSRAKQTL-----PVIYVKLYMYQLF-RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC 244
Query: 488 DFGSASWSHENEI-TPYLVSRFYRAP 512
DFGSA E Y+ SR+YRAP
Sbjct: 245 DFGSAKQLVRGEPNVSYICSRYYRAP 270
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 22/86 (25%)
Query: 443 YRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH---------------VNESKLVLKLC 487
Y RA+Q L P + +LF R+ ++IH ++ VLKLC
Sbjct: 150 YSRAKQTL-----PVIYVKLYMYQLF-RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC 203
Query: 488 DFGSASWSHENEI-TPYLVSRFYRAP 512
DFGSA E Y+ SR+YRAP
Sbjct: 204 DFGSAKQLVRGEPNVSYICSRYYRAP 229
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 22/86 (25%)
Query: 443 YRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH---------------VNESKLVLKLC 487
Y RA+Q L P + +LF R+ ++IH ++ VLKLC
Sbjct: 112 YSRAKQTL-----PVIYVKLYMYQLF-RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC 165
Query: 488 DFGSASWSHENEI-TPYLVSRFYRAP 512
DFGSA E Y+ SR+YRAP
Sbjct: 166 DFGSAKQLVRGEPNVSYICSRYYRAP 191
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + N +TPY+V+R+YRAP
Sbjct: 158 VVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAP 194
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TPY+V+R+YRAP
Sbjct: 158 VVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 16/74 (21%)
Query: 454 GQPSSAITEAQVKLFCRNASFIHVN---------ESKLV-----LKLCDFGSAS-WSHEN 498
G P+ I + ++ F R F+H N E+ LV +KL DFG A +S++
Sbjct: 116 GLPAETIKDL-MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM 174
Query: 499 EITPYLVSRFYRAP 512
+TP +V+ +YRAP
Sbjct: 175 ALTPVVVTLWYRAP 188
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TPY+V+R+YRAP
Sbjct: 158 VVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TPY+V+R+YRAP
Sbjct: 158 VVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TPY+V+R+YRAP
Sbjct: 158 VVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TPY+V+R+YRAP
Sbjct: 158 VVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TPY+V+R+YRAP
Sbjct: 151 VVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 187
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TPY+V+R+YRAP
Sbjct: 196 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 232
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TPY+V+R+YRAP
Sbjct: 158 VVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TPY+V+R+YRAP
Sbjct: 158 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TPY+V+R+YRAP
Sbjct: 158 VVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TPY+V+R+YRAP
Sbjct: 158 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TPY+V+R+YRAP
Sbjct: 159 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 195
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TPY+V+R+YRAP
Sbjct: 158 VVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TPY+V+R+YRAP
Sbjct: 159 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 195
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TPY+V+R+YRAP
Sbjct: 158 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TPY+V+R+YRAP
Sbjct: 158 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TPY+V+R+YRAP
Sbjct: 158 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TPY+V+R+YRAP
Sbjct: 159 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 195
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TPY+V+R+YRAP
Sbjct: 157 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 193
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TPY+V+R+YRAP
Sbjct: 152 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 188
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TPY+V+R+YRAP
Sbjct: 196 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 232
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TPY+V+R+YRAP
Sbjct: 152 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 188
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TPY+V+R+YRAP
Sbjct: 151 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 187
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TPY+V+R+YRAP
Sbjct: 158 VVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TPY+V+R+YRAP
Sbjct: 163 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 199
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TPY+V+R+YRAP
Sbjct: 152 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 188
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHENEIT-PYLVSRFYRAP 512
VN LKLCDFGSA +E + + SRFYRAP
Sbjct: 174 VNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAP 210
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 109 MGADLNNIVKXQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 158 VNEDX-ELKILDFGLARHT-DDEMTGYVATRWYRAP 191
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 111 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 159
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 160 VNEDS-ELKILDFGLARHT-DDEMTGYVATRWYRAP 193
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 115 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 163
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 164 VNEDS-ELKILDFGLARHT-DDEMTGYVATRWYRAP 197
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 120 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 168
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 169 VNEDX-ELKILDFGLARHT-DDEMTGYVATRWYRAP 202
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 114 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 162
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 163 VNEDX-ELKILDFGLARHT-DDEMTGYVATRWYRAP 196
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 114 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 162
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 163 VNEDX-ELKILDFGLARHT-DDEMTGYVATRWYRAP 196
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 22/86 (25%)
Query: 443 YRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH---------------VNESKLVLKLC 487
Y RA+Q L P + +LF R+ ++IH ++ VLKLC
Sbjct: 112 YSRAKQTL-----PVIYVKLYMYQLF-RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC 165
Query: 488 DFGSASWSHENEI-TPYLVSRFYRAP 512
DFGSA E + SR+YRAP
Sbjct: 166 DFGSAKQLVRGEPNVSXICSRYYRAP 191
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 22/86 (25%)
Query: 443 YRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH---------------VNESKLVLKLC 487
Y RA+Q L P + +LF R+ ++IH ++ VLKLC
Sbjct: 112 YSRAKQTL-----PVIYVKLYMYQLF-RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC 165
Query: 488 DFGSASWSHENEI-TPYLVSRFYRAP 512
DFGSA E + SR+YRAP
Sbjct: 166 DFGSAKQLVRGEPNVSXICSRYYRAP 191
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 22/86 (25%)
Query: 443 YRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH---------------VNESKLVLKLC 487
Y RA+Q L P + +LF R+ ++IH ++ VLKLC
Sbjct: 116 YSRAKQTL-----PVIYVKLYMYQLF-RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC 169
Query: 488 DFGSASWSHENEI-TPYLVSRFYRAP 512
DFGSA E + SR+YRAP
Sbjct: 170 DFGSAKQLVRGEPNVSXICSRYYRAP 195
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 132 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 180
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 181 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 214
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 22/86 (25%)
Query: 443 YRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH---------------VNESKLVLKLC 487
Y RA+Q L P + +LF R+ ++IH ++ VLKLC
Sbjct: 112 YSRAKQTL-----PVIYVKLYMYQLF-RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC 165
Query: 488 DFGSASWSHENEI-TPYLVSRFYRAP 512
DFGSA E + SR+YRAP
Sbjct: 166 DFGSAKQLVRGEPNVSXICSRYYRAP 191
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 22/86 (25%)
Query: 443 YRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH---------------VNESKLVLKLC 487
Y RA+Q L P + +LF R+ ++IH ++ VLKLC
Sbjct: 131 YSRAKQTL-----PVIYVKLYMYQLF-RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC 184
Query: 488 DFGSASWSHENEI-TPYLVSRFYRAP 512
DFGSA E + SR+YRAP
Sbjct: 185 DFGSAKQLVRGEPNVSXICSRYYRAP 210
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 22/86 (25%)
Query: 443 YRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH---------------VNESKLVLKLC 487
Y RA+Q L P + +LF R+ ++IH ++ VLKLC
Sbjct: 146 YSRAKQTL-----PVIYVKLYMYQLF-RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC 199
Query: 488 DFGSASWSHENEI-TPYLVSRFYRAP 512
DFGSA E + SR+YRAP
Sbjct: 200 DFGSAKQLVRGEPNVSXICSRYYRAP 225
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 22/86 (25%)
Query: 443 YRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH---------------VNESKLVLKLC 487
Y RA+Q L P + +LF R+ ++IH ++ VLKLC
Sbjct: 124 YSRAKQTL-----PVIYVKLYMYQLF-RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC 177
Query: 488 DFGSASWSHENEI-TPYLVSRFYRAP 512
DFGSA E + SR+YRAP
Sbjct: 178 DFGSAKQLVRGEPNVSXICSRYYRAP 203
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 128 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 176
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 177 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 210
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 120 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 168
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 169 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 202
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 22/86 (25%)
Query: 443 YRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH---------------VNESKLVLKLC 487
Y RA+Q L P + +LF R+ ++IH ++ VLKLC
Sbjct: 120 YSRAKQTL-----PVIYVKLYMYQLF-RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC 173
Query: 488 DFGSASWSHENEI-TPYLVSRFYRAP 512
DFGSA E + SR+YRAP
Sbjct: 174 DFGSAKQLVRGEPNVSXICSRYYRAP 199
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 22/86 (25%)
Query: 443 YRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH---------------VNESKLVLKLC 487
Y RA+Q L P + +LF R+ ++IH ++ VLKLC
Sbjct: 113 YSRAKQTL-----PVIYVKLYMYQLF-RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC 166
Query: 488 DFGSASWSHENEI-TPYLVSRFYRAP 512
DFGSA E + SR+YRAP
Sbjct: 167 DFGSAKQLVRGEPNVSXICSRYYRAP 192
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 109 MGADLNNIVKXQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 158 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 191
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 106 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 154
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 155 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 188
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 109 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 158 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 191
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 121 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 169
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 170 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 203
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 22/86 (25%)
Query: 443 YRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH---------------VNESKLVLKLC 487
Y RA+Q L P + +LF R+ ++IH ++ VLKLC
Sbjct: 112 YSRAKQTL-----PVIYVKLYMYQLF-RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC 165
Query: 488 DFGSASWSHENEI-TPYLVSRFYRAP 512
DFGSA E + SR+YRAP
Sbjct: 166 DFGSAKQLVRGEPNVSXICSRYYRAP 191
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 128 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 176
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 177 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 210
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 129 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 177
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 178 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 211
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 22/86 (25%)
Query: 443 YRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH---------------VNESKLVLKLC 487
Y RA+Q L P + +LF R+ ++IH ++ VLKLC
Sbjct: 124 YSRAKQTL-----PVIYVKLYMYQLF-RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC 177
Query: 488 DFGSASWSHENEI-TPYLVSRFYRAP 512
DFGSA E + SR+YRAP
Sbjct: 178 DFGSAKQLVRGEPNVSXICSRYYRAP 203
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 105 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 153
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 154 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 187
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 109 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 158 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 191
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 109 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 158 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 191
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 109 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 158 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 191
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 111 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 159
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 160 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 193
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 121 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 169
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 170 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 203
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 109 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 158 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 191
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 129 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 177
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 178 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 211
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 121 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 169
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 170 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 203
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 106 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 154
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 155 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 188
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 115 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 163
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 164 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 197
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 109 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 158 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 191
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 107 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 155
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 156 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 189
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 111 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 159
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 160 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 193
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 109 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 158 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 191
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 105 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 153
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 154 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 187
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 109 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 158 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 191
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 111 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 159
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 160 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 193
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 114 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 162
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 163 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 196
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 108 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 156
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 157 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 190
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 109 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 158 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 191
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 114 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 162
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 163 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 196
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 119 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 167
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 168 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 201
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 116 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 164
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 165 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 198
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 115 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 163
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 164 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 197
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 115 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 163
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 164 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 197
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
Query: 484 LKLCDFGSASWS-----HENEITPYLVSRFYRAP 512
LK+CDFG A + H +T Y+ +R+YRAP
Sbjct: 163 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
Query: 484 LKLCDFGSASWS-----HENEITPYLVSRFYRAP 512
LK+CDFG A + H +T Y+ +R+YRAP
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
Query: 484 LKLCDFGSASWS-----HENEITPYLVSRFYRAP 512
LK+CDFG A + H +T Y+ +R+YRAP
Sbjct: 171 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 204
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
Query: 484 LKLCDFGSASWS-----HENEITPYLVSRFYRAP 512
LK+CDFG A + H +T Y+ +R+YRAP
Sbjct: 163 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
Query: 484 LKLCDFGSASWS-----HENEITPYLVSRFYRAP 512
LK+CDFG A + H +T Y+ +R+YRAP
Sbjct: 163 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
Query: 484 LKLCDFGSASWS-----HENEITPYLVSRFYRAP 512
LK+CDFG A + H +T Y+ +R+YRAP
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
Query: 484 LKLCDFGSASWS-----HENEITPYLVSRFYRAP 512
LK+CDFG A + H +T Y+ +R+YRAP
Sbjct: 165 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 445 RAQQLLHQLGQPSSAITEAQVKLFCRNASFIHVNESKLVLKLCDFGSASWSHENEITPYL 504
+ Q L++Q+ + I A V + VNE LK+ DFG A + + E+T Y+
Sbjct: 145 KIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNED-CELKILDFGLARHA-DAEMTGYV 202
Query: 505 VSRFYRAP 512
V+R+YRAP
Sbjct: 203 VTRWYRAP 210
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
Query: 484 LKLCDFGSASWS-----HENEITPYLVSRFYRAP 512
LK+CDFG A + H +T Y+ +R+YRAP
Sbjct: 183 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
Query: 484 LKLCDFGSASWS-----HENEITPYLVSRFYRAP 512
LK+CDFG A + H +T Y+ +R+YRAP
Sbjct: 183 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
Query: 484 LKLCDFGSASWS-----HENEITPYLVSRFYRAP 512
LK+CDFG A + H +T Y+ +R+YRAP
Sbjct: 163 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
Query: 484 LKLCDFGSASWS-----HENEITPYLVSRFYRAP 512
LK+CDFG A + H +T Y+ +R+YRAP
Sbjct: 165 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
Query: 484 LKLCDFGSASWS-----HENEITPYLVSRFYRAP 512
LK+CDFG A + H +T Y+ +R+YRAP
Sbjct: 161 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
Query: 484 LKLCDFGSASWS-----HENEITPYLVSRFYRAP 512
LK+CDFG A + H +T Y+ +R+YRAP
Sbjct: 161 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
Query: 484 LKLCDFGSASWS-----HENEITPYLVSRFYRAP 512
LK+CDFG A + H +T Y+ +R+YRAP
Sbjct: 165 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
Query: 484 LKLCDFGSASWS-----HENEITPYLVSRFYRAP 512
LK+CDFG A + H +T Y+ +R+YRAP
Sbjct: 168 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 201
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
Query: 484 LKLCDFGSASWS-----HENEITPYLVSRFYRAP 512
LK+CDFG A + H +T Y+ +R+YRAP
Sbjct: 169 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 202
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
Query: 484 LKLCDFGSASWS-----HENEITPYLVSRFYRAP 512
LK+CDFG A + H +T Y+ +R+YRAP
Sbjct: 160 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 193
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
Query: 484 LKLCDFGSASWS-----HENEITPYLVSRFYRAP 512
LK+CDFG A + H +T Y+ +R+YRAP
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
Query: 484 LKLCDFGSASWS-----HENEITPYLVSRFYRAP 512
LK+CDFG A + H +T Y+ +R+YRAP
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
Query: 484 LKLCDFGSASWS-----HENEITPYLVSRFYRAP 512
LK+CDFG A + H +T Y+ +R+YRAP
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 138 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 186
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T Y+ +R+YRAP
Sbjct: 187 VNED-CELKILDFGLARHT-DDEMTGYVATRWYRAP 220
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 445 RAQQLLHQLGQPSSAITEAQVKLFCRNASFIHVNESKLVLKLCDFGSASWSHENEITPYL 504
+ Q L++Q+ + I A V + VNE LK+ DFG A + + E+T Y+
Sbjct: 127 KIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNED-CELKILDFGLARHA-DAEMTGYV 184
Query: 505 VSRFYRAP 512
V+R+YRAP
Sbjct: 185 VTRWYRAP 192
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 447 QQLLHQLGQPSSAITEAQVKLFCRNASFIHVNESKLVLKLCDFGSASWSHENEITPYLVS 506
Q L++Q+ + I A + S + VNE LK+ DFG A + ++E+T Y+ +
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED-CELKILDFGLARHT-DDEMTGYVAT 181
Query: 507 RFYRAP 512
R+YRAP
Sbjct: 182 RWYRAP 187
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 116 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 164
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + +E+T Y+ +R+YRAP
Sbjct: 165 VNED-CELKILDFGLARHT-ADEMTGYVATRWYRAP 198
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 116 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 164
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + +E+T Y+ +R+YRAP
Sbjct: 165 VNED-CELKILDFGLARHT-ADEMTGYVATRWYRAP 198
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 427 LQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIHVNESKLVLKL 486
L + + QA D V Q L++QL + I A + S + VNE L++
Sbjct: 119 LNNIVKSQALSDEHV-----QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDS-ELRI 172
Query: 487 CDFGSASWSHENEITPYLVSRFYRAP 512
DFG A + E E+T Y+ +R+YRAP
Sbjct: 173 LDFGLARQADE-EMTGYVATRWYRAP 197
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 116 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 164
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + +E+T Y+ +R+YRAP
Sbjct: 165 VNED-CELKILDFGLARHT-ADEMTGYVATRWYRAP 198
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 109 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ D+G A + ++E+T Y+ +R+YRAP
Sbjct: 158 VNED-CELKILDYGLARHT-DDEMTGYVATRWYRAP 191
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 32.0 bits (71), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 484 LKLCDFGSASWSHENEITPYLVSRFYRAP 512
+K+ DFGS+ + H+ T + SRFYRAP
Sbjct: 241 IKVIDFGSSCYEHQRVYT-XIQSRFYRAP 268
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 447 QQLLHQLGQPSSAITEAQVKLFCRNASFIHVNESKLVLKLCDFGSASWSHENEITPYLVS 506
Q L++QL + I A + S + VNE L++ DFG A + E E+T Y+ +
Sbjct: 134 QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDS-ELRILDFGLARQADE-EMTGYVAT 191
Query: 507 RFYRAP 512
R+YRAP
Sbjct: 192 RWYRAP 197
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 484 LKLCDFGSASWSHENEITPYLVSRFYRAP 512
+K+ DFGS+ + H+ T + SRFYRAP
Sbjct: 241 IKVIDFGSSCYEHQRVYT-XIQSRFYRAP 268
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 447 QQLLHQLGQPSSAITEAQVKLFCRNASFIHVNESKLVLKLCDFGSASWSHENEITPYLVS 506
Q L++QL + I A + S + VNE L++ DFG A + E E+T Y+ +
Sbjct: 126 QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNED-CELRILDFGLARQADE-EMTGYVAT 183
Query: 507 RFYRAP 512
R+YRAP
Sbjct: 184 RWYRAP 189
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 484 LKLCDFGSASWSHENEITPYLVSRFYRAP 512
+K+ DFGS+ + H+ + + SRFYRAP
Sbjct: 241 IKVIDFGSSCYEHQ-RVYXXIQSRFYRAP 268
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 26/88 (29%)
Query: 450 LHQLGQPSSAITEAQVKLFC----RNASFIH---------------VNESKLVLKLCDFG 490
LHQ+ S +T V+ F R ++H VNE+ LK+ DFG
Sbjct: 145 LHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNEN-CELKIGDFG 203
Query: 491 SASW------SHENEITPYLVSRFYRAP 512
A H+ +T Y+ +R+YRAP
Sbjct: 204 MARGLCTSPAEHQYFMTEYVATRWYRAP 231
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + + P++V+R+YRAP
Sbjct: 160 VVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAP 196
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 109 MGADLNNIVKSQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG + ++E+T Y+ +R+YRAP
Sbjct: 158 VNEDS-ELKILDFGLCRHT-DDEMTGYVATRWYRAP 191
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 132 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 180
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+ Y+ +R+YRAP
Sbjct: 181 VNED-CELKILDFGLARHT-DDEMXGYVATRWYRAP 214
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 26/88 (29%)
Query: 450 LHQLGQPSSAITEAQVKLFC----RNASFIH---------------VNESKLVLKLCDFG 490
LHQ+ S +T V+ F R ++H VNE+ LK+ DFG
Sbjct: 146 LHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNEN-CELKIGDFG 204
Query: 491 SASW------SHENEITPYLVSRFYRAP 512
A H+ +T Y+ +R+YRAP
Sbjct: 205 MARGLCTSPAEHQYFMTEYVATRWYRAP 232
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 477 VNESKLVLKLCDFGSASWSHEN-EITPYLVSRFYRAP 512
V +S LK+ DFG A + + +TP +V+R+YRAP
Sbjct: 158 VVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAP 194
>pdb|1VB5|A Chain A, Crystal Structure Analysis Of The Pyrococcus Horikoshii
Ot3 Translation Initiation Factor Eif-2b
pdb|1VB5|B Chain B, Crystal Structure Analysis Of The Pyrococcus Horikoshii
Ot3 Translation Initiation Factor Eif-2b
Length = 276
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Query: 454 GQPSSAITEAQVKLFCRNASFIHV------NESKLVLKLCDFGSASWSHENEITPYLVSR 507
G IT+AQ+ LFCR AS V + +V K + A HEN I Y+ +
Sbjct: 160 GIEFEVITDAQMGLFCREASIAIVGADMITKDGYVVNKAGTYLLALACHENAIPFYVAAE 219
Query: 508 FYR 510
Y+
Sbjct: 220 TYK 222
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 109 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ FG A + ++E+T Y+ +R+YRAP
Sbjct: 158 VNED-CELKILGFGLARHT-DDEMTGYVATRWYRAP 191
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 109 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+T + +R+YRAP
Sbjct: 158 VNED-CELKILDFGLARHT-DDEMTGXVATRWYRAP 191
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 105 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 153
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+ ++ +R+YRAP
Sbjct: 154 VNED-CELKILDFGLARHT-DDEMAGFVATRWYRAP 187
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 109 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+ ++ +R+YRAP
Sbjct: 158 VNED-CELKILDFGLARHT-DDEMAGFVATRWYRAP 191
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 109 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ D G A + ++E+T Y+ +R+YRAP
Sbjct: 158 VNED-CELKILDAGLARHT-DDEMTGYVATRWYRAP 191
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 109 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DFG A + ++E+ ++ +R+YRAP
Sbjct: 158 VNED-CELKILDFGLARHT-DDEMAGFVATRWYRAP 191
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 109 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ D G A + ++E+T Y+ +R+YRAP
Sbjct: 158 VNED-CELKILDRGLARHT-DDEMTGYVATRWYRAP 191
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 109 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ D G A + ++E+T Y+ +R+YRAP
Sbjct: 158 VNED-CELKILDGGLARHT-DDEMTGYVATRWYRAP 191
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 417 MTADTTRYIALQQLYRDQAGRDADVIYRRAQQLLHQLGQPSSAITEAQVKLFCRNASFIH 476
M AD + Q+L D Q L++Q+ + I A + S +
Sbjct: 109 MGADLNNIVKCQKLTDDHV-----------QFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 477 VNESKLVLKLCDFGSASWSHENEITPYLVSRFYRAP 512
VNE LK+ DF A + ++E+T Y+ +R+YRAP
Sbjct: 158 VNED-CELKILDFYLARHT-DDEMTGYVATRWYRAP 191
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 483 VLKLCDFGSASWSHENEITPYLVSRFYRAP 512
+++ DFGSA++ HE+ T + +R YRAP
Sbjct: 194 AVRVVDFGSATFDHEHHST-IVSTRHYRAP 222
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 484 LKLCDFGSASWSHENEITPYLVSRFYRAP 512
+++ DFGSA++ HE+ T + +R YR P
Sbjct: 181 IRVADFGSATFDHEHHTT-IVATRHYRPP 208
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 484 LKLCDFGSASWSHENEITPYLVSRFYRAP 512
+++ DFGSA++ HE+ T + +R YR P
Sbjct: 213 IRVADFGSATFDHEHHTT-IVATRHYRPP 240
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 484 LKLCDFGSASWSHENEITPYLVSRFYRAP 512
+++ DFGSA++ HE+ T + +R YR P
Sbjct: 190 IRVADFGSATFDHEHHTT-IVATRHYRPP 217
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,036,144
Number of Sequences: 62578
Number of extensions: 624953
Number of successful extensions: 1788
Number of sequences better than 100.0: 175
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 150
Number of HSP's that attempted gapping in prelim test: 1708
Number of HSP's gapped (non-prelim): 210
length of query: 512
length of database: 14,973,337
effective HSP length: 103
effective length of query: 409
effective length of database: 8,527,803
effective search space: 3487871427
effective search space used: 3487871427
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)