BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17423
(185 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Query: 7 MIKGVLGMAIPKSWYLHTKKKLE--IDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWL 64
M +L +A P+ +H K E + K S+I + Q +I + +
Sbjct: 147 MCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYR 206
Query: 65 FLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKG 124
+V+LG+PYD ID+WS GC + E++TG+ +FSG + + +++ G P ++ +
Sbjct: 207 SPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQA 266
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Query: 7 MIKGVLGMAIPKSWYLHTKKKLE--IDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWL 64
M +L +A P+ +H K E + K S+I + Q +I + +
Sbjct: 166 MCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYR 225
Query: 65 FLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKG 124
+V+LG+PYD ID+WS GC + E++TG+ +FSG + + +++ G P ++ +
Sbjct: 226 SPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQA 285
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 37/58 (63%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKG 124
+V+LG+PYD ID+WS GC + E++TG+ +FSG + + +++ G P ++ +
Sbjct: 228 EVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQA 285
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMF------SGKSNNQMLKFFMDLKGKFPNKV 120
+V+LG P+ G D+WS C I+EL TG +F S ++ + ++L G+ P+ +
Sbjct: 205 EVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYL 264
Query: 121 IRKGQFKDQHFDS 133
+R G++ F+S
Sbjct: 265 LRNGKYTRTFFNS 277
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMF------SGKSNNQMLKFFMDLKGKFPNKV 120
+V+LG P+ G D+WS C I+EL TG +F S ++ + ++L G+ P+ +
Sbjct: 205 EVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYL 264
Query: 121 IRKGQFKDQHFDS 133
+R G++ F+S
Sbjct: 265 LRNGKYTRTFFNS 277
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 34 VKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTG 93
VKI+ + W+ K D T+ + L+V++G Y+ D+WS C +EL TG
Sbjct: 235 VKIADLGNACWVHK---HFTEDIQTRQ--YRSLEVLIGSGYNTPADIWSTACMAFELATG 289
Query: 94 KIMFSGKSNNQMLK------FFMDLKGKFPNKVIRKGQFKDQHF 131
+F S + + ++L GK P K+I G++ + F
Sbjct: 290 DYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFF 333
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 66 LKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLK------FFMDLKGKFPNK 119
L+V++G Y+ D+WS C +EL TG +F S + + ++L GK P K
Sbjct: 246 LEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRK 305
Query: 120 VIRKGQFKDQHF 131
+I G++ + F
Sbjct: 306 LIVAGKYSKEFF 317
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVI 121
Y ID+WS GC + E+ TGK +F G ++ + LK D+ G PN+ +
Sbjct: 186 YSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGT-PNESL 232
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + L+ M L G P VI +
Sbjct: 229 YNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISR 278
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
+VIL + + D+WS GC I+E Y G +F N + L + G P+++IRK
Sbjct: 223 EVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGPIPSRMIRK 279
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 53 KIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDL 112
++ T + + +VILG Y ID+WS GC + EL TG + G+ L ++L
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIEL 314
Query: 113 KGKFPNKVI 121
G K++
Sbjct: 315 LGMPSQKLL 323
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 53 KIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDL 112
++ T + + +VILG Y ID+WS GC + EL TG + G+ L ++L
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIEL 314
Query: 113 KGKFPNKVI 121
G K++
Sbjct: 315 LGMPSQKLL 323
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
Y +D+WS GC + E+ TGK +F G + LK M + G P + +++ Q
Sbjct: 203 YTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQ 254
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKG 114
+VILG Y ID+WS GC + EL TG + G+ L ++L G
Sbjct: 269 EVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLG 316
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 67 KVILG-IPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
+++LG Y GID+WS GC + E+ GK +F G S L+ + + N+ + Q
Sbjct: 200 EILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQ 259
Query: 126 FKDQHFDSHCNFQYHEVDKVTERVSIKLIFQINFRNPYTKWTRLL 170
F ++ + E+V I+ Q N R+ +TKW LL
Sbjct: 260 SP---------FAKTMIESLKEKVEIR---QSNKRDIFTKWKNLL 292
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 220 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 269
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 207 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 256
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 255
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 255
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 223 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 272
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 219 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 268
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 255
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 254
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 245
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 207 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 256
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 219 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 268
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 220 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 269
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 210 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 259
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 207 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 256
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 207 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 256
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 245
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 245
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 220 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 269
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 254
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 255
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 198 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 247
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 254
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 197 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 246
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 251
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 251
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 212 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 261
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 211 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 260
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 254
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 211 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 260
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 199 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 248
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 251
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 245
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 251
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 197 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 246
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 212 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 261
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 212 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 261
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL TG+ +F G + LK + L G ++++K
Sbjct: 223 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 272
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 28 LEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTI 87
L+ DG V+IS + + L+ Q K T G ++ +++LG YDF +D ++ G T+
Sbjct: 322 LDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG--FMAPELLLGEEYDFSVDYFALGVTL 379
Query: 88 YELYTGKIMFSGK----SNNQMLKFFMDLKGKFPNK 119
YE+ + F + N ++ + ++ +P+K
Sbjct: 380 YEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK 415
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 28 LEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTI 87
L+ DG V+IS + + L+ Q K T G ++ +++LG YDF +D ++ G T+
Sbjct: 322 LDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG--FMAPELLLGEEYDFSVDYFALGVTL 379
Query: 88 YELYTGKIMFSGK----SNNQMLKFFMDLKGKFPNK 119
YE+ + F + N ++ + ++ +P+K
Sbjct: 380 YEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK 415
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 28 LEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTI 87
L+ DG V+IS + + L+ Q K T G ++ +++LG YDF +D ++ G T+
Sbjct: 322 LDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG--FMAPELLLGEEYDFSVDYFALGVTL 379
Query: 88 YELYTGKIMFSGK----SNNQMLKFFMDLKGKFPNK 119
YE+ + F + N ++ + ++ +P+K
Sbjct: 380 YEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK 415
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKG 124
+VIL + +D D+WS GC + ELYTG ++F + + L + P ++ +
Sbjct: 229 EVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEA 286
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 28 LEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTI 87
L+ DG V+IS + + L+ Q K T G ++ +++LG YDF +D ++ G T+
Sbjct: 322 LDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG--FMAPELLLGEEYDFSVDYFALGVTL 379
Query: 88 YELYTGKIMFSGK----SNNQMLKFFMDLKGKFPNK 119
YE+ + F + N ++ + ++ +P+K
Sbjct: 380 YEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK 415
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL GK +F G LK M++ G +V+ K
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAK 255
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL GK +F G LK M++ G +V+ K
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAK 255
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y+ +D+WS GC + EL GK +F G LK M++ G +V+ K
Sbjct: 198 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAK 247
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 68 VILG-IPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQF 126
++LG Y ID+W GC YE+ TG+ +F G + + L F + G P + G
Sbjct: 171 ILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGT-PTEETWPGIL 229
Query: 127 KDQHFDSHCNFQY 139
++ F ++ +Y
Sbjct: 230 SNEEFKTYNYPKY 242
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKS 101
+VILG+ Y +DLWS GC + E+ KI+F G+
Sbjct: 195 EVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRD 229
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKS 101
+VILG+ Y +DLWS GC + E+ KI+F G+
Sbjct: 200 EVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRD 234
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKS 101
+VILG+ Y +DLWS GC + E+ KI+F G+
Sbjct: 189 EVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRD 223
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%)
Query: 56 TMTKGVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGK 115
TM + +L ++I G ++ +DLW G YEL G F S+N+ + + + K
Sbjct: 180 TMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLK 239
Query: 116 FPNKVIRKGQ 125
FP V Q
Sbjct: 240 FPASVPTGAQ 249
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 11/105 (10%)
Query: 34 VKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTG 93
VKI+ + W+ K D T+ + ++V++G Y D+WS C +EL TG
Sbjct: 227 VKIADLGNACWVHK---HFTEDIQTRQ--YRSIEVLIGAGYSTPADIWSTACMAFELATG 281
Query: 94 KIMFSGKS------NNQMLKFFMDLKGKFPNKVIRKGQFKDQHFD 132
+F S + + ++L G P G++ + F+
Sbjct: 282 DYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSREFFN 326
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKS 101
+VILG+ Y +D+WS GC + E+ KI+F G+
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRD 229
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
+VIL + + D+WS GC ++E Y G +F N + L + G P+ +I +
Sbjct: 218 EVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHR 274
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKS 101
+VILG+ Y +D+WS GC + E+ KI+F G+
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 229
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
+VIL + + D+WS GC ++E Y G +F N + L + G P+ +I +
Sbjct: 209 EVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHR 265
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
+VIL + + D+WS GC ++E Y G +F N + L + G P+ +I +
Sbjct: 241 EVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHR 297
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKS 101
+VILG+ Y +D+WS GC + E+ KI+F G+
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 229
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKS 101
+VILG+ Y +D+WS GC + E+ KI+F G+
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 229
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKS 101
+VILG+ Y +D+WS GC + E+ KI+F G+
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 229
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKS 101
+VILG+ Y +D+WS GC + E+ KI+F G+
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 222
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSN 102
+VILG+ Y +D+WS GC + EL G ++F G +
Sbjct: 193 EVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDH 228
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKS 101
+VILG+ Y +D+WS GC + E+ KI+F G+
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 230
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKS 101
+VILG+ Y +D+WS GC + E+ KI+F G+
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 229
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKS 101
+VILG+ Y +D+WS GC + E+ KI+F G+
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 229
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKS 101
+VILG+ Y +D+WS GC + E+ KI+F G+
Sbjct: 194 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 228
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKS 101
+VILG+ Y +D+WS GC + E+ KI+F G+
Sbjct: 189 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 223
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKS 101
+VILG+ Y +D+WS GC + E+ KI+F G+
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 230
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKS 101
+VILG+ Y +D+WS GC + E+ KI+F G+
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 222
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKS 101
+VILG+ Y +D+WS GC + E+ KI+F G+
Sbjct: 189 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 223
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
Y ID+W+AGC E+ TGK +F+G + ++ ++
Sbjct: 202 YTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILE 239
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+V+L Y +D+WS GC E++ K +F G S L DL G P
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+V+L Y +D+WS GC E++ K +F G S L DL G P
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKS 101
+VILG+ Y +D+WS GC + E+ KI+F G+
Sbjct: 233 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 267
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+V+L Y +D+WS GC E++ K +F G S L DL G P
Sbjct: 189 EVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+V+L Y +D+WS GC E++ K +F G S L DL G P
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKS 101
+VILG+ Y +D+WS GC + E+ KI+F G+
Sbjct: 233 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 267
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKG 114
+V+L Y +DLWS GC E++ K +F G S+ L +D+ G
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKG 114
+V+L Y +DLWS GC E++ K +F G S+ L +D+ G
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKG 114
+V+L Y +DLWS GC E++ K +F G S+ L +D+ G
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 32 GVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFG--IDLWSAGCTIYE 89
GV+KIS T L + +T T + ++ ++I P +G D+WS GCTI E
Sbjct: 160 GVLKISDFGTSKRLAGINPCT--ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIE 217
Query: 90 LYTGKIMFS--GKSNNQMLKFFM 110
+ TGK F G+ M K M
Sbjct: 218 MATGKPPFYELGEPQAAMFKVGM 240
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSN 102
+VILG+ Y +D+WS GC + EL G ++F G +
Sbjct: 195 EVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDH 230
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 53 KIDTMTKGVLWLFLKVIL---GIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFF 109
+++ T VLW+ +VI P+ F D++S G +YEL TG++ +S +N + F
Sbjct: 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM 249
Query: 110 M 110
+
Sbjct: 250 V 250
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 32 GVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFG--IDLWSAGCTIYE 89
GV+KIS T L + +T T + ++ ++I P +G D+WS GCTI E
Sbjct: 146 GVLKISDFGTSKRLAGINPCT--ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIE 203
Query: 90 LYTGKIMFS--GKSNNQMLKFFM 110
+ TGK F G+ M K M
Sbjct: 204 MATGKPPFYELGEPQAAMFKVGM 226
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 52 AKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
++ DT+ + +L ++I G +D +DLWS G YE GK F + + K
Sbjct: 162 SRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 221
Query: 112 LKGKFPN 118
++ FP+
Sbjct: 222 VEFTFPD 228
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSG 99
+VILG+ Y +D+WS GC + E+ G ++F G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSG 99
+VILG+ Y +D+WS GC + E+ G ++F G
Sbjct: 197 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 229
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSG 99
+VILG+ Y +D+WS GC + E+ G ++F G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSG 99
+VILG+ Y +D+WS GC + E+ G ++F G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSG 99
+VILG+ Y +D+WS GC + E+ G ++F G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSG 99
+VILG+ Y +D+WS GC + E+ G ++F G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSG 99
+VILG+ Y +D+WS GC + E+ G ++F G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSG 99
+VILG+ Y +D+WS GC + E+ G ++F G
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 228
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSG 99
+VILG+ Y +D+WS GC + E+ G ++F G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
+VIL + + D+WS GC + E Y G +F + + L + G P +I+K +
Sbjct: 204 EVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTR 262
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
+VIL + + D+WS GC + E Y G +F + + L + G P +I+K +
Sbjct: 204 EVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTR 262
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y ID+WSAGC + EL G+ +F G S L + + G + IR+
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y ID+WSAGC + EL G+ +F G S L + + G + IR+
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y ID+WSAGC + EL G+ +F G S L + + G + IR+
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y ID+WSAGC + EL G+ +F G S L + + G + IR+
Sbjct: 208 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 257
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y ID+WSAGC + EL G+ +F G S L + + G + IR+
Sbjct: 212 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 261
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y ID+WSAGC + EL G+ +F G S L + + G + IR+
Sbjct: 204 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 253
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y ID+WSAGC + EL G+ +F G S L + + G + IR+
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y ID+WSAGC + EL G+ +F G S L + + G + IR+
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y ID+WSAGC + EL G+ +F G S L + + G + IR+
Sbjct: 205 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 254
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y ID+WSAGC + EL G+ +F G S L + + G + IR+
Sbjct: 201 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 250
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y ID+WSAGC + EL G+ +F G S L + + G + IR+
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y ID+WSAGC + EL G+ +F G S L + + G + IR+
Sbjct: 234 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 283
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y ID+WSAGC + EL G+ +F G S L + + G + IR+
Sbjct: 219 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 268
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y ID+WSAGC + EL G+ +F G S L + + G + IR+
Sbjct: 212 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 261
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y ID+WSAGC + EL G+ +F G S L + + G + IR+
Sbjct: 236 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 285
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 14/129 (10%)
Query: 6 TMIKGVLGMAIPKSWYLHTKKKLEID-----------GVVKISSIFTFLWLRKVQNMAKI 54
+ IK V+ M + +Y+H K L D GV+K++ +N
Sbjct: 125 SEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPN 184
Query: 55 DTMTKGV-LWLFLKVILGIPYDFG--IDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
+ V LW +L D+G IDLW AGC + E++T + G + L
Sbjct: 185 RYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ 244
Query: 112 LKGKFPNKV 120
L G +V
Sbjct: 245 LCGSITPEV 253
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y ID+WSAGC + EL G+ +F G S L + + G + IR+
Sbjct: 234 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 283
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y ID+WSAGC + EL G+ +F G S L + + G + IR+
Sbjct: 279 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 328
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y ID+WSAGC + EL G+ +F G S L + + G + IR+
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y ID+WSAGC + EL G+ +F G S L + + G + IR+
Sbjct: 213 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 262
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y ID+WSAGC + EL G+ +F G S L + + G + IR+
Sbjct: 238 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 287
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y ID+WSAGC + EL G+ +F G S L + + G + IR+
Sbjct: 228 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 277
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 67 KVILG-IPYDFGIDLWSAGCTIYELYTGKIMFSGKS 101
+VIL + Y+ +D+WS GC + E+ TGK +F GK
Sbjct: 193 EVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 228
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSG-KSNNQMLKFFMDLKGKFPNK 119
Y +D+WS GC E+ TGK +F G ++Q+ K F L P +
Sbjct: 197 YSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPRE 243
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSG-KSNNQMLKFFMDLKGKFPNK 119
Y +D+WS GC E+ TGK +F G ++Q+ K F L P +
Sbjct: 197 YSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPRE 243
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 67 KVILG-IPYDFGIDLWSAGCTIYELYTGKIMFSGKS 101
+VIL + Y+ +D+WS GC + E+ TGK +F GK
Sbjct: 211 EVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 246
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 67 KVILGIPY-DFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
+++LG Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 229
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 67 KVILGIPY-DFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
+++LG Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 230
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 67 KVILGIPY-DFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
+++LG Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 230
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 67 KVILGIPY-DFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
+++LG Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 229
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 67 KVILGIPY-DFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
+++LG Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 229
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 67 KVILGIPY-DFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
+++LG Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 229
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 67 KVILGIPY-DFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
+++LG Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 230
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 67 KVILGIPY-DFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
+++LG Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 229
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 230
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 67 KVILGIPY-DFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
+++LG Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 230
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 67 KVILGIPY-DFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
+++LG Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 230
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 31 DGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTIYEL 90
DG V++ L +A+ T +L ++ PY+ D+W+ GC +YEL
Sbjct: 161 DGTVQLGDFGIARVLNSTVELARACIGTP--YYLSPEICENKPYNNKSDIWALGCVLYEL 218
Query: 91 YTGKIMF-SGKSNNQMLKFFMDLKGKFP 117
T K F +G N +LK + G FP
Sbjct: 219 CTLKHAFEAGSMKNLVLKI---ISGSFP 243
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 234
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 67 KVILGIPY-DFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
+++LG Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 229
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 67 KVILGIPY-DFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
+++LG Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 230
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 67 KVILGIPY-DFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
+++LG Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 230
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 67 KVILGIPY-DFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
+++LG Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 230
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 67 KVILGIPY-DFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
+++LG Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 231
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 232
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 233
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 232
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 232
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 237
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 67 KVILGIPY-DFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
+++LG Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 231
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 67 KVILGIPY-DFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
+++LG Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 231
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 67 KVILGIPY-DFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
+++LG Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 231
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 14/129 (10%)
Query: 6 TMIKGVLGMAIPKSWYLHTKKKLEID-----------GVVKISSIFTFLWLRKVQNMAKI 54
+ IK V+ M + +Y+H K L D GV+K++ +N
Sbjct: 125 SEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPN 184
Query: 55 DTMTKGV-LWLFLKVILGIPYDFG--IDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
+ V LW +L D+G IDLW AGC + E++T + G + L
Sbjct: 185 RYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ 244
Query: 112 LKGKFPNKV 120
L G +V
Sbjct: 245 LCGSITPEV 253
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 67 KVILGIPY-DFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
+++LG Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 230
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 14/129 (10%)
Query: 6 TMIKGVLGMAIPKSWYLHTKKKLEID-----------GVVKISSIFTFLWLRKVQNMAKI 54
+ IK V+ M + +Y+H K L D GV+K++ +N
Sbjct: 124 SEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPN 183
Query: 55 DTMTKGV-LWLFLKVILGIPYDFG--IDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
+ V LW +L D+G IDLW AGC + E++T + G + L
Sbjct: 184 RYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ 243
Query: 112 LKGKFPNKV 120
L G +V
Sbjct: 244 LCGSITPEV 252
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 233
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 14/129 (10%)
Query: 6 TMIKGVLGMAIPKSWYLHTKKKLEID-----------GVVKISSIFTFLWLRKVQNMAKI 54
+ IK V+ M + +Y+H K L D GV+K++ +N
Sbjct: 125 SEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPN 184
Query: 55 DTMTKGV-LWLFLKVILGIPYDFG--IDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
+ V LW +L D+G IDLW AGC + E++T + G + L
Sbjct: 185 RYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ 244
Query: 112 LKGKFPNKV 120
L G +V
Sbjct: 245 LCGSITPEV 253
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFP 117
+L ++I G +D +DLW AG YE G F S+ + + +++ KFP
Sbjct: 178 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP 232
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 237
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 233
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 233
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 53 KIDTMTKGVLWLFLKVIL---GIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFF 109
+ + ++ +LW+ +VI PY F D+++ G +YEL TG++ +S +N + F
Sbjct: 182 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 241
Query: 110 M 110
+
Sbjct: 242 V 242
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 234
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 67 KVILGIPY-DFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
+++LG Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 232
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 67 KVILGIPY-DFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
+++LG Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 231
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 233
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFPNKVIRKG 124
Y +D+WS GC E+ T + +F G S +Q+ + F L P++V+ G
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPG 233
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFP 117
+L ++I G +D +DLW AG YE G F S+ + + +++ KFP
Sbjct: 178 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP 232
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFP 117
+L ++I G +D +DLW AG YE G F S+ + + +++ KFP
Sbjct: 179 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP 233
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 53 KIDTMTKGVLWLFLKVIL---GIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFF 109
+ + ++ +LW+ +VI PY F D+++ G +YEL TG++ +S +N + F
Sbjct: 189 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 248
Query: 110 M 110
+
Sbjct: 249 V 249
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 28 LEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVIL---GIPYDFGIDLWSAG 84
L D VKI + + + ++ +LW+ +VI PY F D+++ G
Sbjct: 153 LHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212
Query: 85 CTIYELYTGKIMFSGKSNNQML 106
+YEL TG++ +S +N +
Sbjct: 213 IVLYELMTGQLPYSNINNRDQI 234
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 28 LEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVIL---GIPYDFGIDLWSAG 84
L D VKI + + + ++ +LW+ +VI PY F D+++ G
Sbjct: 153 LHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212
Query: 85 CTIYELYTGKIMFSGKSNNQML 106
+YEL TG++ +S +N +
Sbjct: 213 IVLYELMTGQLPYSNINNRDQI 234
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 13/62 (20%), Positives = 32/62 (51%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIR 122
++ ++I PY +D W+ G +YE+ G+ F G+ +++ + M+ +P + +
Sbjct: 508 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSK 567
Query: 123 KG 124
+
Sbjct: 568 EA 569
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 53 KIDTMTKGVLWLFLKVIL---GIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFF 109
+ + ++ +LW+ +VI PY F D+++ G +YEL TG++ +S +N + F
Sbjct: 190 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 249
Query: 110 M 110
+
Sbjct: 250 V 250
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 53 KIDTMTKGVLWLFLKVIL---GIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFF 109
+ + ++ +LW+ +VI PY F D+++ G +YEL TG++ +S +N + F
Sbjct: 164 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 223
Query: 110 M 110
+
Sbjct: 224 V 224
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 53 KIDTMTKGVLWLFLKVIL---GIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFF 109
+ + ++ +LW+ +VI PY F D+++ G +YEL TG++ +S +N + F
Sbjct: 190 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 249
Query: 110 M 110
+
Sbjct: 250 V 250
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 13/62 (20%), Positives = 32/62 (51%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIR 122
++ ++I PY +D W+ G +YE+ G+ F G+ +++ + M+ +P + +
Sbjct: 186 YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSK 245
Query: 123 KG 124
+
Sbjct: 246 EA 247
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 53 KIDTMTKGVLWLFLKVIL---GIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFF 109
+ + ++ +LW+ +VI PY F D+++ G +YEL TG++ +S +N + F
Sbjct: 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221
Query: 110 M 110
+
Sbjct: 222 V 222
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 39 IFTFLWLRKVQNMAKIDTMTKGVL----WLFLKVILGIPYDFGIDLWSAGCTIYELYTGK 94
+ F R + + T T V+ +L + G D D++S GC +YE+ TG+
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
Query: 95 IMFSGKSNNQM 105
F+G S + +
Sbjct: 217 PPFTGDSPDSV 227
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 53 KIDTMTKGVLWLFLKVIL---GIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFF 109
+ + ++ +LW+ +VI PY F D+++ G +YEL TG++ +S +N + F
Sbjct: 167 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 226
Query: 110 M 110
+
Sbjct: 227 V 227
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 53 KIDTMTKGVLWLFLKVIL---GIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFF 109
+ + ++ +LW+ +VI PY F D+++ G +YEL TG++ +S +N + F
Sbjct: 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221
Query: 110 M 110
+
Sbjct: 222 V 222
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 53 KIDTMTKGVLWLFLKVIL---GIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFF 109
+ + ++ +LW+ +VI PY F D+++ G +YEL TG++ +S +N + F
Sbjct: 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221
Query: 110 M 110
+
Sbjct: 222 V 222
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKS 101
Y ID+WS GC + EL G+ +F G+S
Sbjct: 219 YTTNIDIWSTGCVMAELMQGQPLFPGES 246
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 53 KIDTMTKGVLWLFLKVIL---GIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFF 109
+ + ++ +LW+ +VI PY F D+++ G +YEL TG++ +S +N + F
Sbjct: 167 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 226
Query: 110 M 110
+
Sbjct: 227 V 227
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 28 LEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVIL---GIPYDFGIDLWSAG 84
L D VKI + + + ++ +LW+ +VI PY F D+++ G
Sbjct: 141 LHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 200
Query: 85 CTIYELYTGKIMFSGKSNNQML 106
+YEL TG++ +S +N +
Sbjct: 201 IVLYELMTGQLPYSNINNRDQI 222
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 19/104 (18%)
Query: 3 KIGTMIKGVL-GMAIPKSWYLHTKKKLEID-----------GVVKISSIFTFLWLRKVQN 50
+I TM+K +L G+ YLH++KK+ D G VK++ L Q
Sbjct: 121 QIATMLKEILKGLD-----YLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ- 174
Query: 51 MAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGK 94
K +T W+ +VI YD D+WS G T EL G+
Sbjct: 175 -IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 13/62 (20%), Positives = 32/62 (51%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIR 122
++ ++I PY +D W+ G +YE+ G+ F G+ +++ + M+ +P + +
Sbjct: 187 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSK 246
Query: 123 KG 124
+
Sbjct: 247 EA 248
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKG 114
Y IDLWS GC EL GK +FSG+++ L + + G
Sbjct: 219 YTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMG 259
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 52 AKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
++ D + + +L ++I G +D +DLWS G YE GK F + + K
Sbjct: 187 SRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 246
Query: 112 LKGKFPN 118
++ FP+
Sbjct: 247 VEFTFPD 253
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 39 IFTFLWLRKVQNMAKIDTMTKGVL----WLFLKVILGIPYDFGIDLWSAGCTIYELYTGK 94
+ F R + + T T V+ +L + G D D++S GC +YE+ TG+
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
Query: 95 IMFSGKS 101
F+G S
Sbjct: 217 PPFTGDS 223
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 39 IFTFLWLRKVQNMAKIDTMTKGVL----WLFLKVILGIPYDFGIDLWSAGCTIYELYTGK 94
+ F R + + T T V+ +L + G D D++S GC +YE+ TG+
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
Query: 95 IMFSGKS 101
F+G S
Sbjct: 217 PPFTGDS 223
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 14/109 (12%)
Query: 21 YLHTKKK------------LEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKV 68
YLH++K L+ DG +KI+ L +++ A + T +L +V
Sbjct: 266 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFG--LCKEGIKDGATMKTFCGTPEYLAPEV 323
Query: 69 ILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFP 117
+ Y +D W G +YE+ G++ F + + ++ + + + +FP
Sbjct: 324 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP 372
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 14/109 (12%)
Query: 21 YLHTKKK------------LEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKV 68
YLH++K L+ DG +KI+ L +++ A + T +L +V
Sbjct: 263 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFG--LCKEGIKDGATMKTFCGTPEYLAPEV 320
Query: 69 ILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFP 117
+ Y +D W G +YE+ G++ F + + ++ + + + +FP
Sbjct: 321 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP 369
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 39 IFTFLWLRKVQNMAKIDTMTKGVL----WLFLKVILGIPYDFGIDLWSAGCTIYELYTGK 94
+ F R + + T T V+ +L + G D D++S GC +YE+ TG+
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
Query: 95 IMFSGKS 101
F+G S
Sbjct: 217 PPFTGDS 223
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 33/67 (49%)
Query: 52 AKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
++ T++ + +L ++I G +D +DLWS G YE GK F + + K
Sbjct: 162 SRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 221
Query: 112 LKGKFPN 118
++ FP+
Sbjct: 222 VEFTFPD 228
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 39 IFTFLWLRKVQNMAKIDTMTKGVL----WLFLKVILGIPYDFGIDLWSAGCTIYELYTGK 94
+ F R + + T T V+ +L + G D D++S GC +YE+ TG+
Sbjct: 174 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
Query: 95 IMFSGKS 101
F+G S
Sbjct: 234 PPFTGDS 240
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 52 AKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
++ D + + +L ++I G +D +DLWS G YE GK F + + K
Sbjct: 164 SRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
Query: 112 LKGKFPN 118
++ FP+
Sbjct: 224 VEFTFPD 230
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 11/107 (10%)
Query: 21 YLHTKKKLEID--------GVVKISSIFTFLWLRKVQNMAKIDTMTKGVL-WLFLKVILG 71
Y H+K+ + D G I F W V + T G L +L + I G
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEXIEG 185
Query: 72 IPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+D +DLWS G YE GK F + + K ++ FP+
Sbjct: 186 RXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 232
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 34.7 bits (78), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 11/107 (10%)
Query: 21 YLHTKKKLEID--------GVVKISSIFTFLWLRKVQNMAKIDTMTKGVL-WLFLKVILG 71
Y H+K+ + D G I F W V + T G L +L ++I G
Sbjct: 125 YCHSKRVIHRDIKPENLLLGSAGELKIANFGW--SVHAPSSRRTTLCGTLDYLPPEMIEG 182
Query: 72 IPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+D +DLWS G YE GK F + + K ++ FP+
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 229
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 34.7 bits (78), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 11/107 (10%)
Query: 21 YLHTKKKLEID--------GVVKISSIFTFLWLRKVQNMAKIDTMTKGVL-WLFLKVILG 71
Y H+K+ + D G I F W V + T G L +L ++I G
Sbjct: 149 YCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEG 206
Query: 72 IPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+D +DLWS G YE GK F + + K ++ FP+
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 253
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 34.3 bits (77), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 9/106 (8%)
Query: 21 YLHTKKKLEID--------GVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGI 72
Y H+K+ + D G I F W + + D + + +L ++I G
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD-LCGTLDYLPPEMIEGR 186
Query: 73 PYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+D +DLWS G YE GK F + + K ++ FP+
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 232
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 34.3 bits (77), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 11/107 (10%)
Query: 21 YLHTKKKLEID--------GVVKISSIFTFLWLRKVQNMAKIDTMTKGVL-WLFLKVILG 71
Y H+K+ + D G I F W V + T G L +L ++I G
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIANFGW--SVHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 72 IPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+D +DLWS G YE GK F + + K ++ FP+
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 230
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 34.3 bits (77), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 11/107 (10%)
Query: 21 YLHTKKKLEID--------GVVKISSIFTFLWLRKVQNMAKIDTMTKGVL-WLFLKVILG 71
Y H+K+ + D G I F W V + T G L +L ++I G
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEG 180
Query: 72 IPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+D +DLWS G YE GK F + + K ++ FP+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 227
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 34.3 bits (77), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 11/107 (10%)
Query: 21 YLHTKKKLEID--------GVVKISSIFTFLWLRKVQNMAKIDTMTKGVL-WLFLKVILG 71
Y H+K+ + D G I F W V + T G L +L ++I G
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEG 185
Query: 72 IPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+D +DLWS G YE GK F + + K ++ FP+
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 232
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 34.3 bits (77), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 56 TMTKGVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGK 115
T+ + +L ++I G +D +DLWS G YE GK F + + K ++
Sbjct: 182 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 241
Query: 116 FPN 118
FP+
Sbjct: 242 FPD 244
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 34.3 bits (77), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 9/106 (8%)
Query: 21 YLHTKKKLEID--------GVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGI 72
Y H+K+ + D G I F W + + D + + +L ++I G
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD-LCGTLDYLPPEMIEGR 181
Query: 73 PYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+D +DLWS G YE GK F + + K ++ FP+
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 227
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 34.3 bits (77), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 11/107 (10%)
Query: 21 YLHTKKKLEID--------GVVKISSIFTFLWLRKVQNMAKIDTMTKGVL-WLFLKVILG 71
Y H+K+ + D G I F W V + T G L +L ++I G
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEG 185
Query: 72 IPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+D +DLWS G YE GK F + + K ++ FP+
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 232
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 34.3 bits (77), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 9/106 (8%)
Query: 21 YLHTKKKLEID--------GVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGI 72
Y H+K+ + D G I F W + + D + + +L ++I G
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD-LCGTLDYLPPEMIEGR 181
Query: 73 PYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+D +DLWS G YE GK F + + K ++ FP+
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 227
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 34.3 bits (77), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 9/106 (8%)
Query: 21 YLHTKKKLEID--------GVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGI 72
Y H+K+ + D G I F W + + D + + +L ++I G
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD-LCGTLDYLPPEMIEGR 182
Query: 73 PYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+D +DLWS G YE GK F + + K ++ FP+
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 228
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 34.3 bits (77), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 52 AKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
++ T+ + +L ++I G +D +DLWS G YE GK F + + K
Sbjct: 160 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 219
Query: 112 LKGKFPN 118
++ FP+
Sbjct: 220 VEFTFPD 226
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 34.3 bits (77), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 52 AKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
++ T+ + +L ++I G +D +DLWS G YE GK F + + K
Sbjct: 164 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
Query: 112 LKGKFPN 118
++ FP+
Sbjct: 224 VEFTFPD 230
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 34.3 bits (77), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 72 IPYDFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDLKGKFP 117
+ Y +D+W+ GC + E++ G+ +F G S+ +Q+ M L P
Sbjct: 200 VKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIP 246
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 34.3 bits (77), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 11/107 (10%)
Query: 21 YLHTKKKLEID--------GVVKISSIFTFLWLRKVQNMAKIDTMTKGVL-WLFLKVILG 71
Y H+K+ + D G I F W V + T G L +L ++I G
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTXLCGTLDYLPPEMIEG 180
Query: 72 IPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+D +DLWS G YE GK F + + K ++ FP+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 227
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 34.3 bits (77), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 11/107 (10%)
Query: 21 YLHTKKKLEID--------GVVKISSIFTFLWLRKVQNMAKIDTMTKGVL-WLFLKVILG 71
Y H+K+ + D G I F W V + T G L +L ++I G
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTELCGTLDYLPPEMIEG 180
Query: 72 IPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+D +DLWS G YE GK F + + K ++ FP+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 227
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 34.3 bits (77), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 11/107 (10%)
Query: 21 YLHTKKKLEID--------GVVKISSIFTFLWLRKVQNMAKIDTMTKGVL-WLFLKVILG 71
Y H+K+ + D G I F W V + T G L +L ++I G
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEG 184
Query: 72 IPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+D +DLWS G YE GK F + + K ++ FP+
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 231
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 34.3 bits (77), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 52 AKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
++ T+ + +L ++I G +D +DLWS G YE GK F + + K
Sbjct: 164 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
Query: 112 LKGKFPN 118
++ FP+
Sbjct: 224 VEFTFPD 230
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 34.3 bits (77), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 52 AKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
++ T+ + +L ++I G +D +DLWS G YE GK F + + K
Sbjct: 158 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 217
Query: 112 LKGKFPN 118
++ FP+
Sbjct: 218 VEFTFPD 224
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 34.3 bits (77), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 28 LEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTI 87
L+ DG +KI+ + + AK + ++ +++LG Y+ +D WS G +
Sbjct: 152 LDKDGHIKIADFG--MCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLL 209
Query: 88 YELYTGKIMFSGKSNNQM 105
YE+ G+ F G+ ++
Sbjct: 210 YEMLIGQSPFHGQDEEEL 227
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 33.9 bits (76), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIR 122
Y IDLWS GC E+ + +F GK+ L+ M + G VI+
Sbjct: 240 YTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ 288
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 33.9 bits (76), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIR 122
Y IDLWS GC E+ + +F GK+ L+ M + G VI+
Sbjct: 241 YTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ 289
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 33.9 bits (76), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 28 LEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTI 87
L+ DG +KI+ + + AK + ++ +++LG Y+ +D WS G +
Sbjct: 151 LDKDGHIKIADFG--MCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLL 208
Query: 88 YELYTGKIMFSGKSNNQM 105
YE+ G+ F G+ ++
Sbjct: 209 YEMLIGQSPFHGQDEEEL 226
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 33.9 bits (76), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++I G +D +DLWS G YE GK F + + K ++ FP+
Sbjct: 174 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 229
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 33.9 bits (76), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++I G +D +DLWS G YE GK F + + K ++ FP+
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 232
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 33.9 bits (76), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++I G +D +DLWS G YE GK F + + K ++ FP+
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 227
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 33.9 bits (76), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 52 AKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
++ DT+ + +L ++I G +D +DLWS G YE G F + + +
Sbjct: 165 SRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISR 224
Query: 112 LKGKFPN 118
++ FP+
Sbjct: 225 VEFTFPD 231
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 33.9 bits (76), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++I G +D +DLWS G YE GK F + + K ++ FP+
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 230
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 33.9 bits (76), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 32 GVVKISSI-FTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGI-PYDFGIDLWSAGCTIYE 89
G VKI+ + F L+ ++ +A +D + + +++LG Y ID+W+ GC E
Sbjct: 169 GRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAE 228
Query: 90 LYTGKIMFSGKSNN 103
L T + +F + +
Sbjct: 229 LLTSEPIFHCRQED 242
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 33.9 bits (76), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++I G +D +DLWS G YE GK F + + K ++ FP+
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 227
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 33.9 bits (76), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
Y +D+WS GC E+ G+ +F G ++ L + + G +V+RK
Sbjct: 209 YTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRK 258
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 33.9 bits (76), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFF 109
Y ID+WS GC E+ G +F G S +Q+++ F
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIF 214
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 33.9 bits (76), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++I G +D +DLWS G YE GK F + + K ++ FP+
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 230
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 33.5 bits (75), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFF 109
Y ID+WS GC E+ G +F G S +Q+++ F
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIF 214
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 33.5 bits (75), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFF 109
Y ID+WS GC E+ G +F G S +Q+++ F
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIF 214
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 33.5 bits (75), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 74 YDFGIDLWSAGCTIYELY-TGKIMFSGKSNNQMLKFFMDLKG 114
Y ID+WSAGC EL G+ +F G + LK L G
Sbjct: 179 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLG 220
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 33.5 bits (75), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 60 GVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKF 116
G + +L YD D+WS G +Y L G F G+++ ++LK KGKF
Sbjct: 185 GTAYYIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVE--KGKF 239
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 33.5 bits (75), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 60 GVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKF 116
G + +L YD D+WS G +Y L G F G+++ ++LK KGKF
Sbjct: 168 GTAYYIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVE--KGKF 222
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 33.5 bits (75), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/93 (21%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 28 LEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTI 87
L+ DG +KI+ L + + A + T +L +V+ Y +D W G +
Sbjct: 141 LDKDGHIKITDFG--LCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 198
Query: 88 YELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKV 120
YE+ G++ F + + ++ + + + +FP +
Sbjct: 199 YEMMCGRLPFYNQDHERLFELILMEEIRFPRTL 231
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 33.1 bits (74), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/93 (21%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 28 LEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTI 87
L+ DG +KI+ L + + A + T +L +V+ Y +D W G +
Sbjct: 138 LDKDGHIKITDFG--LCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 195
Query: 88 YELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKV 120
YE+ G++ F + + ++ + + + +FP +
Sbjct: 196 YEMMCGRLPFYNQDHERLFELILMEEIRFPRTL 228
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 33.1 bits (74), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 28 LEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTI 87
L+ DG +KI+ L + + A + T +L +V+ Y +D W G +
Sbjct: 138 LDKDGHIKITDFG--LCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 195
Query: 88 YELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
YE+ G++ F + + ++ + + + +FP
Sbjct: 196 YEMMCGRLPFYNQDHERLFELILMEEIRFPR 226
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 33.1 bits (74), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSG 99
+VILG+ Y +D+WS G + E+ G ++F G
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGEMIKGGVLFPG 227
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 33.1 bits (74), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSG 99
+VILG+ Y +D+WS G + E+ G ++F G
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGEMIKGGVLFPG 227
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 33.1 bits (74), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 78 IDLWSAGCTIYELYTGKIMFSGKS-NNQMLK 107
+D+WSAGC + E++ K +F G + NQ+ K
Sbjct: 215 VDMWSAGCVMAEMFNRKALFRGSTFYNQLNK 245
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 33.1 bits (74), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 78 IDLWSAGCTIYELYTGKIMFSGKS-NNQMLK 107
+D+WSAGC + E++ K +F G + NQ+ K
Sbjct: 215 VDMWSAGCVMAEMFNRKALFRGSTFYNQLNK 245
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 33.1 bits (74), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 60 GVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLK 107
G + +L YD D+WSAG +Y L +G F GK+ +LK
Sbjct: 185 GTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK 232
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKS 101
+L + G D D++S GC +YE+ TG+ F+G S
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 13/89 (14%)
Query: 21 YLHTKKKLEID-----------GVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVI 69
YLH++KK+ D G VK++ L Q K +T W+ +VI
Sbjct: 119 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVI 176
Query: 70 LGIPYDFGIDLWSAGCTIYELYTGKIMFS 98
YD D+WS G T EL G+ S
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGEPPHS 205
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 60 GVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLK 107
G + +L YD D+WSAG +Y L +G F GK+ +LK
Sbjct: 185 GTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK 232
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 13/85 (15%)
Query: 21 YLHTKKKLEID-----------GVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVI 69
YLH+++K+ D G VK++ L Q K + W+ +VI
Sbjct: 131 YLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--IKRNXFVGTPFWMAPEVI 188
Query: 70 LGIPYDFGIDLWSAGCTIYELYTGK 94
YDF D+WS G T EL G+
Sbjct: 189 KQSAYDFKADIWSLGITAIELAKGE 213
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 60 GVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLK 107
G + +L YD D+WSAG +Y L +G F GK+ +LK
Sbjct: 185 GTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK 232
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++I G +D +DLWS G YE GK F + K ++ FP+
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPD 227
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 48/109 (44%), Gaps = 14/109 (12%)
Query: 21 YLHTKKK------------LEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKV 68
YLH++K L+ DG +KI+ L +++ A + +L +V
Sbjct: 123 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFG--LCKEGIKDGATMKXFCGTPEYLAPEV 180
Query: 69 ILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFP 117
+ Y +D W G +YE+ G++ F + + ++ + + + +FP
Sbjct: 181 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP 229
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 48/109 (44%), Gaps = 14/109 (12%)
Query: 21 YLHTKKK------------LEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKV 68
YLH++K L+ DG +KI+ L +++ A + +L +V
Sbjct: 125 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFG--LCKEGIKDGATMKXFCGTPEYLAPEV 182
Query: 69 ILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFP 117
+ Y +D W G +YE+ G++ F + + ++ + + + +FP
Sbjct: 183 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP 231
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 48/109 (44%), Gaps = 14/109 (12%)
Query: 21 YLHTKKK------------LEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKV 68
YLH++K L+ DG +KI+ L +++ A + +L +V
Sbjct: 124 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFG--LCKEGIKDGATMKXFCGTPEYLAPEV 181
Query: 69 ILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFP 117
+ Y +D W G +YE+ G++ F + + ++ + + + +FP
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP 230
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKS-NNQMLKFF 109
Y +D+WS GC + EL+ + +F G+ +Q+L F
Sbjct: 200 YSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIF 236
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 13/85 (15%)
Query: 21 YLHTKKKLEID-----------GVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVI 69
YLH++KK+ D G VK++ L Q K +T W+ +VI
Sbjct: 139 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVI 196
Query: 70 LGIPYDFGIDLWSAGCTIYELYTGK 94
YD D+WS G T EL G+
Sbjct: 197 KQSAYDSKADIWSLGITAIELARGE 221
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKS-NNQMLKFF 109
Y +D+WS GC + EL+ + +F G+ +Q+L F
Sbjct: 200 YSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIF 236
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 28 LEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTI 87
L DG +K+S F F + + + K + W+ +VI +PY +D+WS G +
Sbjct: 174 LTSDGRIKLSD-FGF-CAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMV 231
Query: 88 YELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKV 120
E+ G+ + + Q ++ D P +V
Sbjct: 232 IEMIDGEPPYFNEPPLQAMRRIRD---SLPPRV 261
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKS-NNQMLKFF 109
Y +D+WS GC + EL+ + +F G+ +Q+L F
Sbjct: 200 YSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIF 236
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 79 DLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
DLW+ GC IY+L G F + + + + L+ FP K K +
Sbjct: 194 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 240
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 79 DLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
DLW+ GC IY+L G F + + + + L+ FP K K +
Sbjct: 198 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 244
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 79 DLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
DLW+ GC IY+L G F + + + + L+ FP K K +
Sbjct: 213 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 259
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 79 DLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
DLW+ GC IY+L G F + + + + L+ FP K K +
Sbjct: 213 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 259
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 79 DLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
DLW+ GC IY+L G F + + + + L+ FP K K +
Sbjct: 191 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 237
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 79 DLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
DLW+ GC IY+L G F + + + + L+ FP K K +
Sbjct: 193 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 239
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSG 99
W+ +VI + G D+WS G ++EL TG++ F G
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 79 DLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
DLW+ GC IY+L G F + + + + L+ FP K K +
Sbjct: 192 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 238
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 79 DLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
DLW+ GC IY+L G F + + + + L+ FP K K +
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 260
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 79 DLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
DLW+ GC IY+L G F + + + L+ FP K K +
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKAR 262
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 79 DLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
DLW+ GC IY+L G F + + + + L+ FP K K +
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 262
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 79 DLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
DLW+ GC IY+L G F + + + + L+ FP K K +
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 262
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 79 DLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
DLW+ GC IY+L G F + + + + L+ FP K K +
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 260
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 79 DLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
DLW+ GC IY+L G F + + + L+ FP K K +
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKAR 262
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 79 DLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
DLW+ GC IY+L G F + + + + L+ FP K K +
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 260
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 31 DGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTIYEL 90
DG VK+S F F + + + + + W+ ++I +PY +D+WS G + E+
Sbjct: 283 DGRVKLSD-FGF-CAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 340
Query: 91 YTGKIMFSGKSNNQMLKFFMD 111
G+ + + + +K D
Sbjct: 341 VDGEPPYFNEPPLKAMKMIRD 361
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 79 DLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
DLW+ GC IY+L G F + + + + L+ FP K K +
Sbjct: 217 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 263
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 79 DLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
DLW+ GC IY+L G F + + + + L+ FP K K +
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 262
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 79 DLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
DLW+ GC IY+L G F + + + + L+ FP K K +
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 260
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 79 DLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
DLW+ GC IY+L G F + + + + L+ FP K K +
Sbjct: 221 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 267
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 79 DLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
DLW+ GC IY+L G F + + + + L+ FP K K +
Sbjct: 217 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 263
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 51 MAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFS 98
MAK + + W+ +VI I Y+ D+WS G T E+ GK ++
Sbjct: 179 MAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYA 226
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 79 DLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
DLW+ GC IY+L G F + + + + L+ FP K K +
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 262
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 30/138 (21%)
Query: 48 VQNMAKIDTMTKG------VLWLFLKVILGIPYDFGIDLWSAGCTIYELYT-GKIMFSGK 100
+++ + D KG V W+ + + + D+WS G ++E+ + + + G
Sbjct: 177 TRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL 236
Query: 101 SNNQMLKFFMDLKGKFPNKVIRKGQFKDQHFDSHCNFQYHEVDKVTERVSIKLIFQINFR 160
SN Q+LKF MD G + DQ +C ++VT+ + + F N R
Sbjct: 237 SNEQVLKFVMD------------GGYLDQ--PDNCP------ERVTDLMRMCWQFNPNMR 276
Query: 161 NPYTKWTRLLKG---PAF 175
+ + LLK P+F
Sbjct: 277 PTFLEIVNLLKDDLHPSF 294
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 31.6 bits (70), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 31 DGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTIYEL 90
DG VK+S F F + + + + + W+ ++I +PY +D+WS G + E+
Sbjct: 206 DGRVKLSD-FGF-CAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 263
Query: 91 YTGKIMFSGKSNNQMLKFFMD 111
G+ + + + +K D
Sbjct: 264 VDGEPPYFNEPPLKAMKMIRD 284
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 31.6 bits (70), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGK 100
Y ID+WS GC + E+ + + +F GK
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIFPGK 231
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 31.6 bits (70), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGK 100
Y ID+WS GC + E+ + + +F GK
Sbjct: 225 YTKSIDIWSVGCILAEMLSNRPIFPGK 251
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 31.6 bits (70), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 74 YDFGIDLWSAGCTIYELY-TGKIMFSGKSNNQMLKFFMDLKG 114
Y ID+WSAGC EL + +F G + LK L G
Sbjct: 179 YSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLG 220
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 31.6 bits (70), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGK 100
Y ID+WS GC + E+ + + +F GK
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIFPGK 231
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 31.6 bits (70), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 24/101 (23%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQFKDQHFDSHCNF 137
D+WS G ++E+ + + + G SN Q+LKF MD G + DQ +C
Sbjct: 214 DMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD------------GGYLDQ--PDNCP- 258
Query: 138 QYHEVDKVTERVSIKLIFQINFRNPYTKWTRLLKG---PAF 175
++VT+ + + F N R + + LLK P+F
Sbjct: 259 -----ERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSF 294
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGK 100
Y ID+WS GC + E+ + + +F GK
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIFPGK 231
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGK 100
Y ID+WS GC + E+ + + +F GK
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIFPGK 235
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 24/101 (23%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQFKDQHFDSHCNF 137
D+WS G ++E+ + + + G SN Q+LKF MD G + DQ +C
Sbjct: 215 DMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD------------GGYLDQ--PDNCP- 259
Query: 138 QYHEVDKVTERVSIKLIFQINFRNPYTKWTRLLKG---PAF 175
++VT+ + + F N R + + LLK P+F
Sbjct: 260 -----ERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSF 295
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGK 100
Y ID+WS GC + E+ + + +F GK
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIFPGK 231
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGK 100
Y ID+WS GC + E+ + + +F GK
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIFPGK 235
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGK 100
Y ID+WS GC + E+ + + +F GK
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIFPGK 235
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGK 100
Y ID+WS GC + E+ + + +F GK
Sbjct: 210 YTKSIDIWSVGCILAEMLSNRPIFPGK 236
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGK 100
Y ID+WS GC + E+ + + +F GK
Sbjct: 225 YTKSIDIWSVGCILAEMLSNRPIFPGK 251
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGK 100
Y ID+WS GC + E+ + + +F GK
Sbjct: 207 YTKSIDIWSVGCILAEMLSNRPIFPGK 233
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGK 100
Y ID+WS GC + E+ + + +F GK
Sbjct: 203 YTKSIDIWSVGCILAEMLSNRPIFPGK 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGK 100
Y ID+WS GC + E+ + + +F GK
Sbjct: 225 YTKSIDIWSVGCILAEMLSNRPIFPGK 251
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGK 100
Y ID+WS GC + E+ + + +F GK
Sbjct: 203 YTKSIDIWSVGCILAEMLSNRPIFPGK 229
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGK 100
Y ID+WS GC + E+ + + +F GK
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIFPGK 235
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGK 100
Y ID+WS GC + E+ + + +F GK
Sbjct: 210 YTKSIDIWSVGCILAEMLSNRPIFPGK 236
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGK 100
Y ID+WS GC + E+ + + +F GK
Sbjct: 211 YTKSIDIWSVGCILAEMLSNRPIFPGK 237
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGK 100
Y ID+WS GC + E+ + + +F GK
Sbjct: 202 YTKSIDIWSVGCILAEMLSNRPIFPGK 228
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGK 100
Y ID+WS GC + E+ + + +F GK
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIFPGK 235
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGK 100
Y ID+WS GC + E+ + + +F GK
Sbjct: 207 YTKSIDIWSVGCILAEMLSNRPIFPGK 233
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGK 100
Y ID+WS GC + E+ + + +F GK
Sbjct: 207 YTKSIDIWSVGCILAEMLSNRPIFPGK 233
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGK 100
Y ID+WS GC + E+ + + +F GK
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIFPGK 235
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGK 100
Y ID+WS GC + E+ + + +F GK
Sbjct: 213 YTKSIDIWSVGCILAEMLSNRPIFPGK 239
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGK 100
Y ID+WS GC + E+ + + +F GK
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIFPGK 231
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 31.2 bits (69), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
W+ ++I +PY +D+WS G + E+ G+ + + + +K D
Sbjct: 191 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD 239
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 31.2 bits (69), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/93 (20%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 28 LEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTI 87
L+ DG +KI+ L + + A + +L +V+ Y +D W G +
Sbjct: 138 LDKDGHIKITDFG--LCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 195
Query: 88 YELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKV 120
YE+ G++ F + + ++ + + + +FP +
Sbjct: 196 YEMMCGRLPFYNQDHERLFELILMEEIRFPRTL 228
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 31.2 bits (69), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 13/89 (14%)
Query: 21 YLHTKKKLEID-----------GVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVI 69
YLH++KK+ D G VK++ L Q K + W+ +VI
Sbjct: 134 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNXFVGTPFWMAPEVI 191
Query: 70 LGIPYDFGIDLWSAGCTIYELYTGKIMFS 98
YD D+WS G T EL G+ S
Sbjct: 192 KQSAYDSKADIWSLGITAIELARGEPPHS 220
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 31.2 bits (69), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
W+ ++I +PY +D+WS G + E+ G+ + + + +K D
Sbjct: 193 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD 241
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 31.2 bits (69), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 76 FGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDL-KGKF 116
F +D+WSAG T+Y + TG F G + + K F ++ KG +
Sbjct: 192 FKVDIWSAGVTLYNITTGLYPFEG---DNIYKLFENIGKGSY 230
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 31.2 bits (69), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 48 VQNMAKIDTMTKG------VLWLFLKVILGIPYDFGIDLWSAGCTIYELYT-GKIMFSGK 100
+++ + D KG V W+ + + + D+WS G ++E+ + + + G
Sbjct: 174 TRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL 233
Query: 101 SNNQMLKFFMD 111
SN Q+LKF MD
Sbjct: 234 SNEQVLKFVMD 244
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/93 (20%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 28 LEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTI 87
L+ DG +KI+ L + + A + +L +V+ Y +D W G +
Sbjct: 138 LDKDGHIKITDFG--LCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 195
Query: 88 YELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKV 120
YE+ G++ F + + ++ + + + +FP +
Sbjct: 196 YEMMCGRLPFYNQDHERLFELILMEEIRFPRTL 228
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFS 98
+ F +D+WS GC +Y L GK F
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 48 VQNMAKIDTMTKG------VLWLFLKVILGIPYDFGIDLWSAGCTIYELYT-GKIMFSGK 100
+++ + D KG V W+ + + + D+WS G ++E+ + + + G
Sbjct: 177 TRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL 236
Query: 101 SNNQMLKFFMD 111
SN Q+LKF MD
Sbjct: 237 SNEQVLKFVMD 247
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 31.2 bits (69), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/93 (20%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 28 LEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTI 87
L+ DG +KI+ L + + A + +L +V+ Y +D W G +
Sbjct: 143 LDKDGHIKITDFG--LCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 200
Query: 88 YELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKV 120
YE+ G++ F + + ++ + + + +FP +
Sbjct: 201 YEMMCGRLPFYNQDHERLFELILMEEIRFPRTL 233
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 31.2 bits (69), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFS 98
+ F +D+WS GC +Y L GK F
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 31.2 bits (69), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFS 98
+ F +D+WS GC +Y L GK F
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFP 117
+V+ PY+ ID WS G IYE+ G F + + + ++ + +FP
Sbjct: 173 EVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP 223
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/93 (20%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 28 LEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTI 87
L+ DG +KI+ L + + A + +L +V+ Y +D W G +
Sbjct: 138 LDKDGHIKITDFG--LCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 195
Query: 88 YELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKV 120
YE+ G++ F + + ++ + + + +FP +
Sbjct: 196 YEMMCGRLPFYNQDHERLFELILMEEIRFPRTL 228
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
W+ ++I +PY +D+WS G + E+ G+ + + + +K D
Sbjct: 186 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD 234
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
W+ ++I +PY +D+WS G + E+ G+ + + + +K D
Sbjct: 182 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD 230
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFS 98
+ F +D+WS GC +Y L GK F
Sbjct: 203 HSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 71 GIPYDFGIDLWSAGCTIYELYTGKIMFSGKSN 102
G Y F +D WS G T YEL G+ + +S+
Sbjct: 191 GAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS 222
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 30.8 bits (68), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFFMD 111
D+WS G ++E+ + + + G SN Q+LKF MD
Sbjct: 214 DMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD 247
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 30.8 bits (68), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 17/96 (17%)
Query: 17 PKSWYLHTKKKLEIDGVVKI-----SSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILG 71
P++ L +K+K D ++KI S++F +N K+ G + +L
Sbjct: 164 PENLLLESKEK---DALIKIVDFGLSAVF--------ENQKKMKERL-GTAYYIAPEVLR 211
Query: 72 IPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLK 107
YD D+WS G ++ L G F G+++ ++L+
Sbjct: 212 KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILR 247
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 30.8 bits (68), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 43 LWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSN 102
L +++ + T +L +V+ PYD +D W G +YE+ G F ++
Sbjct: 185 LCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT 244
Query: 103 NQM 105
+M
Sbjct: 245 AEM 247
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 30.8 bits (68), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFFMD 111
D+WS G ++E+ + + + G SN Q+LKF MD
Sbjct: 214 DMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD 247
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 30.8 bits (68), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFS 98
+ F +D+WS GC +Y L GK F
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFS 98
+ F +D+WS GC +Y L GK F
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFS 98
+ F +D+WS GC +Y L GK F
Sbjct: 198 HSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFS 98
+ F +D+WS GC +Y L GK F
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 13/89 (14%)
Query: 21 YLHTKKKLEID-----------GVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVI 69
YLH++KK+ D G VK++ L Q K + W+ +VI
Sbjct: 119 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNXFVGTPFWMAPEVI 176
Query: 70 LGIPYDFGIDLWSAGCTIYELYTGKIMFS 98
YD D+WS G T EL G+ S
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGEPPHS 205
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFS 98
+ F +D+WS GC +Y L GK F
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 30.8 bits (68), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 31/67 (46%)
Query: 52 AKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
++ T+ + +L ++I G +D +DLWS G YE G F + + +
Sbjct: 165 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISR 224
Query: 112 LKGKFPN 118
++ FP+
Sbjct: 225 VEFTFPD 231
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 30.8 bits (68), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 53 KIDTMTKGVLWLFLKVILGIPYD-FGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
K+DT + ++ G YD +D+WS G +Y L +G + F G++ ++ + +
Sbjct: 169 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 228
Query: 112 LKGKFP 117
K + P
Sbjct: 229 GKYRIP 234
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 30.8 bits (68), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFFMD 111
D+WS G ++E+ + + + G SN Q+LKF MD
Sbjct: 213 DMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD 246
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFS 98
+ F +D+WS GC +Y L GK F
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 30.8 bits (68), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMF 97
YD D+WS G T+YEL TG+ +
Sbjct: 206 YDVRSDVWSLGITLYELATGRFPY 229
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 30.8 bits (68), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 52 AKIDTMTKGVLWLFLKVILGIPYD-FGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFM 110
K+DT + ++ G YD +D+WS G +Y L +G + F G++ ++ + +
Sbjct: 165 GKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 224
Query: 111 DLKGKFP 117
K + P
Sbjct: 225 RGKYRIP 231
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 30.8 bits (68), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 53 KIDTMTKGVLWLFLKVILGIPYD-FGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
K+DT + ++ G YD +D+WS G +Y L +G + F G++ ++ + +
Sbjct: 168 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
Query: 112 LKGKFP 117
K + P
Sbjct: 228 GKYRIP 233
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 76 FGIDLWSAGCTIYELYTGKIMFSGKS 101
F D+WSAG +Y L TG + F+G S
Sbjct: 204 FKCDIWSAGVVMYFLLTGCLPFTGTS 229
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 53 KIDTMTKGVLWLFLKVILGIPYD-FGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
K+DT + ++ G YD +D+WS G +Y L +G + F G++ ++ + +
Sbjct: 168 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
Query: 112 LKGKFP 117
K + P
Sbjct: 228 GKYRIP 233
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 30.8 bits (68), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 28 LEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTI 87
L +DG VK+S F F + +++ K + W+ +VI Y +D+WS G +
Sbjct: 174 LTLDGRVKLSD-FGF-CAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMV 231
Query: 88 YELYTGKIMFSGKSNNQMLKFFMD 111
E+ G+ + S Q +K D
Sbjct: 232 IEMVDGEPPYFSDSPVQAMKRLRD 255
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 30.8 bits (68), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 53 KIDTMTKGVLWLFLKVILGIPYD-FGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
K+DT + ++ G YD +D+WS G +Y L +G + F G++ ++ + +
Sbjct: 168 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
Query: 112 LKGKFP 117
K + P
Sbjct: 228 GKYRIP 233
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 30.4 bits (67), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQFKDQHFDS 133
YDF DLWS G T E+ G + M F+ + P +K K Q F
Sbjct: 211 YDFKSDLWSLGITAIEMAEGAPPLC--DMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIE 268
Query: 134 HCNFQYHEVDKVTERV 149
C + H TE++
Sbjct: 269 SCLVKNHSQRPATEQL 284
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 30.4 bits (67), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPS 259
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 30.4 bits (67), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 30.4 bits (67), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 30.4 bits (67), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 30.4 bits (67), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 30.4 bits (67), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 280
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 30.4 bits (67), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 30.4 bits (67), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 30.4 bits (67), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 30.4 bits (67), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 30.4 bits (67), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 190 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 245
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 30.4 bits (67), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 30.4 bits (67), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 30.4 bits (67), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.4 bits (67), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 30.4 bits (67), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 30.4 bits (67), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 30.4 bits (67), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 30.4 bits (67), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 30.4 bits (67), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 199 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 254
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 30.4 bits (67), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 30.4 bits (67), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 30.4 bits (67), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 30.4 bits (67), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 30.4 bits (67), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 53 KIDTMTKGVLWLFLKVILGIPYD-FGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
K+DT + ++ G YD +D+WS G +Y L +G + F G++ ++ + +
Sbjct: 161 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 220
Query: 112 LKGKFP 117
K + P
Sbjct: 221 GKYRIP 226
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 30.4 bits (67), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 30.4 bits (67), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 30.4 bits (67), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 30.4 bits (67), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 280
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 30.4 bits (67), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 30.4 bits (67), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 30.4 bits (67), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 30.4 bits (67), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSN-NQMLKFFMDL 112
Y G+D+W+ GC + EL G S+ +Q+ + F L
Sbjct: 190 YGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETL 229
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.4 bits (67), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 30.4 bits (67), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 30.4 bits (67), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 252
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 30.4 bits (67), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 30.4 bits (67), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 30.4 bits (67), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 30.4 bits (67), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 30.4 bits (67), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.4 bits (67), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 30.4 bits (67), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 30.4 bits (67), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 30.4 bits (67), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 252
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 30.4 bits (67), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 280
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 30.4 bits (67), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNN 103
Y+F D+WS GC +YE+ + F G N
Sbjct: 213 YNFKSDIWSLGCLLYEMAALQSPFYGDKMN 242
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 30.4 bits (67), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 30.0 bits (66), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 191 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 246
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 30.0 bits (66), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 30.0 bits (66), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 30.0 bits (66), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 77 GIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRK 123
D+WS G +Y L +G F ++N Q+++ M+ + F + ++
Sbjct: 183 ATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKE 229
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 30.0 bits (66), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLK 107
+V G P + D+WS G Y L +G F G+++++ L+
Sbjct: 220 EVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLR 260
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 30.0 bits (66), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQML 106
Y +D+W+ GC EL +G ++ GKS+ L
Sbjct: 180 YGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQL 212
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 30.0 bits (66), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 46 RKVQNMAKIDTMTKGVLWLFLKVIL-----GIPYDFGIDLWSAGCTIYEL 90
+ ++ + K D+ W+ +V++ PYD+ D+WS G T+ E+
Sbjct: 166 KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 29.6 bits (65), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 46 RKVQNMAKIDTMTKGVLWLFLKVIL-----GIPYDFGIDLWSAGCTIYEL 90
+ ++ + K D+ W+ +V++ PYD+ D+WS G T+ E+
Sbjct: 158 KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 29.6 bits (65), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 79 DLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
DLW+ GC IY+L G F + + + + L+ FP K +
Sbjct: 219 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPKAR 265
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 29.6 bits (65), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 60 GVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLK 107
G + +L YD D+WS G +Y L +G F+G + +LK
Sbjct: 196 GTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILK 243
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 29.6 bits (65), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFS--GKSNNQ 104
+D +D WS G +YEL TG F+ G+ N+Q
Sbjct: 239 HDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ 271
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 29.6 bits (65), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 60 GVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLK 107
G + +L YD D+WS G +Y L +G F+G + +LK
Sbjct: 190 GTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILK 237
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 29.6 bits (65), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 12/70 (17%), Positives = 35/70 (50%)
Query: 56 TMTKGVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGK 115
T + ++ ++++ ++ +D WS G +Y++ TG F+G++ + + + K
Sbjct: 180 TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN 239
Query: 116 FPNKVIRKGQ 125
P + ++ +
Sbjct: 240 LPPYLTQEAR 249
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 29.6 bits (65), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 11/65 (16%), Positives = 34/65 (52%)
Query: 61 VLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKV 120
+ ++ ++++ ++ +D WS G +Y++ TG F+G++ + + + K P +
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYL 244
Query: 121 IRKGQ 125
++ +
Sbjct: 245 TQEAR 249
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 29.6 bits (65), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 13/52 (25%), Positives = 23/52 (44%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
+ D WS G ++E+ TG + F GK + + + K P + + Q
Sbjct: 207 HSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQ 258
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L +IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 53 KIDTMTKGVLWLFLKVILGIPYD-FGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
K+D + ++ G YD +D+WS G +Y L +G + F G++ ++ + +
Sbjct: 168 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
Query: 112 LKGKFP 117
K + P
Sbjct: 228 GKYRIP 233
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 60 GVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLK 107
G + +L YD D+WS G +Y L +G F+G + +LK
Sbjct: 213 GTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILK 260
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 60 GVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLK 107
G + +L YD D+WS G +Y L +G F+G + +LK
Sbjct: 214 GTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILK 261
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 60 GVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLK 107
G + +L YD D+WS G +Y L +G F+G + +LK
Sbjct: 190 GTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILK 237
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 10/117 (8%)
Query: 51 MAKIDTMTKGVLWLFLKVILGIP---YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLK 107
MA + W+ +VIL + YD +D+WS G T EL K + N M
Sbjct: 204 MAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF--NMNAMSA 261
Query: 108 FFMDLKGKFPNKVIRKGQFKD--QHFDSHCNFQYHEVDKVTERVSIKLIFQINFRNP 162
+ + + P ++ G + + ++F C Q D+ T V +K F + R P
Sbjct: 262 LYHIAQNESP--ALQSGHWSEYFRNFVDSC-LQKIPQDRPTSEVLLKHRFVLRERPP 315
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 64 LFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
L ++IL Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFFMD 111
D+WS G ++E+ T + + G SN Q+L+F M+
Sbjct: 207 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 240
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFFMD 111
D+WS G ++E+ T + + G SN Q+L+F M+
Sbjct: 209 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 242
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++I+ Y+ +D W+ G IYE+ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 52 AKIDTMTKGVLWLFLKVILGIPYD-FGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFM 110
K+D + ++ G YD +D+WS G +Y L +G + F G++ ++ + +
Sbjct: 168 GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 227
Query: 111 DLKGKFP 117
K + P
Sbjct: 228 RGKYRIP 234
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFFMD 111
D+WS G ++E+ T + + G SN Q+L+F M+
Sbjct: 222 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 255
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFFMD 111
D+WS G ++E+ T + + G SN Q+L+F M+
Sbjct: 222 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 255
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFFMD 111
D+WS G ++E+ T + + G SN Q+L+F M+
Sbjct: 216 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 249
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 10/117 (8%)
Query: 51 MAKIDTMTKGVLWLFLKVILGIP---YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLK 107
MA + W+ +VIL + YD +D+WS G T EL K N M
Sbjct: 165 MAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM--NAMSA 222
Query: 108 FFMDLKGKFPNKVIRKGQFKD--QHFDSHCNFQYHEVDKVTERVSIKLIFQINFRNP 162
+ + + P ++ G + + ++F C Q D+ T V +K F + R P
Sbjct: 223 LYHIAQNESP--ALQSGHWSEYFRNFVDSC-LQKIPQDRPTSEVLLKHRFVLRERPP 276
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 29.3 bits (64), Expect = 1.3, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLK 107
+V G P + D+WS G Y L +G F G+++++ L+
Sbjct: 326 EVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLR 366
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFFMD 111
D+WS G ++E+ T + + G SN Q+L+F M+
Sbjct: 215 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 248
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFFMD 111
D+WS G ++E+ T + + G SN Q+L+F M+
Sbjct: 212 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 245
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFFMD 111
D+WS G ++E+ T + + G SN Q+L+F M+
Sbjct: 213 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 246
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFFMD 111
D+WS G ++E+ T + + G SN Q+L+F M+
Sbjct: 209 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 242
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFFMD 111
D+WS G ++E+ T + + G SN Q+L+F M+
Sbjct: 215 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 248
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFFMD 111
D+WS G ++E+ T + + G SN Q+L+F M+
Sbjct: 244 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 277
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 53 KIDTMTKGVLWLFLKVILGIPYD-FGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
K+D + ++ G YD +D+WS G +Y L +G + F G++ ++ + +
Sbjct: 168 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
Query: 112 LKGKFP 117
K + P
Sbjct: 228 GKYRIP 233
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFFMD 111
D+WS G ++E+ T + + G SN Q+L+F M+
Sbjct: 216 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 249
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQF 126
YD DLWS G +Y + +G++ F + +++ K I+KG F
Sbjct: 186 YDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKK-----IKKGDF 233
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFS--GKSNN 103
++ +++ G Y F +D W+ G ++E+ G+ F G S+N
Sbjct: 187 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 229
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFS--GKSNN 103
++ +++ G Y F +D W+ G ++E+ G+ F G S+N
Sbjct: 219 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 261
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFS--GKSNN 103
++ +++ G Y F +D W+ G ++E+ G+ F G S+N
Sbjct: 176 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 218
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFS--GKSNN 103
++ +++ G Y F +D W+ G ++E+ G+ F G S+N
Sbjct: 172 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 214
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 28.9 bits (63), Expect = 1.7, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGK 100
Y F D W+ GC +YE+ G+ F +
Sbjct: 362 YTFSPDWWALGCLLYEMIAGQSPFQQR 388
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 28.9 bits (63), Expect = 1.7, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGK 100
Y F D W+ GC +YE+ G+ F +
Sbjct: 362 YTFSPDWWALGCLLYEMIAGQSPFQQR 388
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
+L ++IL Y+ +D W+ G IY++ G F Q+ + + K +FP+
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMF 97
YDF D+WS G T EL TG +
Sbjct: 204 YDFKADIWSFGITAIELATGAAPY 227
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + + F G+ N L
Sbjct: 210 YDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQL 243
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 79 DLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQ 125
D WS G ++E+ TG + F GK + + + K P + + Q
Sbjct: 208 DWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQ 254
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + + F G+ N L
Sbjct: 215 YDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQL 248
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 53 KIDTMTKGVLWLFLKVILGIPYD-FGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMD 111
K+D + ++ G YD +D+WS G +Y L +G + F G++ ++ + +
Sbjct: 168 KLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
Query: 112 LKGKFP 117
K + P
Sbjct: 228 GKYRIP 233
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMF 97
YDF D+WS G T EL TG +
Sbjct: 199 YDFKADIWSFGITAIELATGAAPY 222
>pdb|3NS4|A Chain A, Structure Of A C-Terminal Fragment Of Its Vps53 Subunit
Suggests Similarity Of Garp To A Family Of Tethering
Complexes
Length = 271
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Query: 60 GVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGK--SNNQMLKFFMD--LKGK 115
+W F+ + GIP+D LW + Y L T + SN + F D L G+
Sbjct: 149 SAVWSFVLALKGIPWDLA--LWKKXWSAYNLETDDTDEGSRPDSNRDLFIFKWDKVLLGQ 206
Query: 116 FPNKVIR 122
F N + R
Sbjct: 207 FENNLAR 213
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 79 DLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
D WS G ++E+ TG + F GK + + + K P
Sbjct: 208 DWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ 247
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 79 DLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPN 118
D WS G ++E+ TG + F GK + + + K P
Sbjct: 209 DWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ 248
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFF-----MDLKGKFPNKVIR 122
D WS G ++E+++ G + + KSN ++L+F MD P V R
Sbjct: 228 DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 277
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFF-----MDLKGKFPNKVIR 122
D WS G ++E+++ G + + KSN ++L+F MD P V R
Sbjct: 228 DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 277
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFF-----MDLKGKFPNKVIR 122
D WS G ++E+++ G + + KSN ++L+F MD P V R
Sbjct: 254 DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 303
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFF-----MDLKGKFPNKVIR 122
D WS G ++E+++ G + + KSN ++L+F MD P V R
Sbjct: 242 DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 291
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFF-----MDLKGKFPNKVIR 122
D WS G ++E+++ G + + KSN ++L+F MD P V R
Sbjct: 228 DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 277
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFF-----MDLKGKFPNKVIR 122
D WS G ++E+++ G + + KSN ++L+F MD P V R
Sbjct: 244 DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 293
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFF-----MDLKGKFPNKVIR 122
D WS G ++E+++ G + + KSN ++L+F MD P V R
Sbjct: 219 DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 268
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFF-----MDLKGKFPNKVIR 122
D WS G ++E+++ G + + KSN ++L+F MD P V R
Sbjct: 227 DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 276
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFF-----MDLKGKFPNKVIR 122
D WS G ++E+++ G + + KSN ++L+F MD P V R
Sbjct: 227 DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 276
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFF-----MDLKGKFPNKVIR 122
D WS G ++E+++ G + + KSN ++L+F MD P V R
Sbjct: 234 DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 283
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFF-----MDLKGKFPNKVIR 122
D WS G ++E+++ G + + KSN ++L+F MD P V R
Sbjct: 242 DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 291
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFF-----MDLKGKFPNKVIR 122
D WS G ++E+++ G + + KSN ++L+F MD P V R
Sbjct: 242 DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 291
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTG 93
+V++G P D +D+WS+ C + + G
Sbjct: 242 EVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTG 93
+V++G P D +D+WS+ C + + G
Sbjct: 226 EVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFF-----MDLKGKFPNKVIR 122
D WS G ++E+++ G + + KSN ++L+F MD P V R
Sbjct: 268 DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 317
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + + F G N L
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTG 93
+V++G P D +D+WS+ C + + G
Sbjct: 240 EVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFP 117
YD D++S G T EL G + F QML L G P
Sbjct: 198 YDAKSDIYSVGITACELANGHVPFKDMPATQML--LEKLNGTVP 239
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQMLKFF-----MDLKGKFPNKVIR 122
D WS G ++E+++ G + + KSN ++L+F MD P V R
Sbjct: 245 DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 294
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 30 IDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVIL-----GIPYDFGIDLWSAG 84
+DG +K++ + + + + + D+ W+ +V++ PYD+ D+WS G
Sbjct: 170 LDGDIKLADFG--VSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLG 227
Query: 85 CTIYEL 90
T+ E+
Sbjct: 228 ITLIEM 233
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFP 117
YD D++S G T EL G + F QML L G P
Sbjct: 214 YDAKSDIYSVGITACELANGHVPFKDMPATQML--LEKLNGTVP 255
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + + F G N L
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + + F G N L
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + + F G N L
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + + F G N L
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + + F G N L
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + + F G N L
Sbjct: 207 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 240
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + + F G N L
Sbjct: 208 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 241
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + + F G N L
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + + F G N L
Sbjct: 208 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 241
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + + F G N L
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 79 DLWSAGCTIYELYT-GKIMFSGKSNNQML 106
D+WS G +YE+ T GKI + G++N ++
Sbjct: 193 DVWSFGILLYEIVTYGKIPYPGRTNADVM 221
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + + F G N L
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + + F G N L
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + + F G N L
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 219 WMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 195 WMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + + F G N L
Sbjct: 214 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 247
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 191 WMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDL-KGKF 116
YD D+WS G +Y + TG F+ ++ + + GKF
Sbjct: 197 YDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKF 240
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 30 IDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVIL-----GIPYDFGIDLWSAG 84
+DG +K++ + + + + + D+ W+ +V++ PYD+ D+WS G
Sbjct: 170 LDGDIKLADFG--VSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLG 227
Query: 85 CTIYEL 90
T+ E+
Sbjct: 228 ITLIEM 233
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 210 WMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 61 VLWLFLKVILGIPYDFGIDLWSAGCTIYELYT-GKIMFSGKSNNQMLKFFM 110
V WL L+ + Y D+W+ G T++E+ T G+ ++G N ++ + +
Sbjct: 203 VKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLI 253
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 179 WMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL Y D+WS G T++EL T
Sbjct: 182 WMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 24/75 (32%)
Query: 65 FLKVILGIPY------------DFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDL 112
F K +G PY + D+WS GC +YEL F+ S + L
Sbjct: 172 FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE-------L 224
Query: 113 KGKFPNKVIRKGQFK 127
GK IR+G+F+
Sbjct: 225 AGK-----IREGKFR 234
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 27.7 bits (60), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 24/75 (32%)
Query: 65 FLKVILGIPY------------DFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDL 112
F K +G PY + D+WS GC +YEL F+ S + L
Sbjct: 172 FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE-------L 224
Query: 113 KGKFPNKVIRKGQFK 127
GK IR+G+F+
Sbjct: 225 AGK-----IREGKFR 234
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 12/56 (21%)
Query: 72 IPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQFK 127
+ Y+ D+WS GC +YEL F+ S + L GK IR+G+F+
Sbjct: 191 MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE-------LAGK-----IREGKFR 234
>pdb|3G5U|A Chain A, Structure Of P-Glycoprotein Reveals A Molecular Basis For
Poly-Specific Drug Binding
pdb|3G5U|B Chain B, Structure Of P-Glycoprotein Reveals A Molecular Basis For
Poly-Specific Drug Binding
Length = 1284
Score = 27.3 bits (59), Expect = 4.5, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 40/105 (38%)
Query: 8 IKGVLGMAIPKSWYLHTKKKLEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLK 67
I GV+ M + L KK+LE G + +I F + + K +TM L + +
Sbjct: 866 IAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYR 925
Query: 68 VILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDL 112
+ + FGI +Y Y F Q L F ++
Sbjct: 926 NAMKKAHVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMTFENV 970
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 27.3 bits (59), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 60 GVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLK 107
G + +L Y+ D+WS G +Y L G F G+++ ++K
Sbjct: 210 GTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIK 257
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 27.3 bits (59), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMF 97
Y +DLWS G T Y TG + F
Sbjct: 200 YGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 27.3 bits (59), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 28 LEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTI 87
L +DG VK++ F F + +K TM W+ +V+ Y +D+WS G
Sbjct: 150 LGMDGSVKLTD-FGFCA-QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMA 207
Query: 88 YELYTGK 94
E+ G+
Sbjct: 208 IEMIEGE 214
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 27.3 bits (59), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 28 LEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTI 87
L +DG VK++ F F + +K TM W+ +V+ Y +D+WS G
Sbjct: 149 LGMDGSVKLTD-FGF-CAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMA 206
Query: 88 YELYTGK 94
E+ G+
Sbjct: 207 IEMIEGE 213
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 27.3 bits (59), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDL-KGKF 116
YD G D+WS G +Y + G F+ ++ + + GKF
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKF 245
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 27.3 bits (59), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMF 97
Y +DLWS G T Y TG + F
Sbjct: 200 YGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 27.3 bits (59), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 73 PYDFGIDLWSAGCTIYEL 90
PYD+ D+WS G T+ E+
Sbjct: 216 PYDYKADVWSLGITLIEM 233
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 26.9 bits (58), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 73 PYDFGIDLWSAGCTIYEL 90
PYD+ D+WS G T+ E+
Sbjct: 190 PYDYKADVWSLGITLIEM 207
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 26.9 bits (58), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 35 KISSIFTFLWLRKVQNMAKIDTMTKG-----VLWLFLKVILGIPYDFGIDLWSAGCTIYE 89
+I+ I F R ++N + + + KG V W+ + I Y F D+WS G ++E
Sbjct: 198 RITKICDFGLARDIKNDS--NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE 255
Query: 90 LYT 92
L++
Sbjct: 256 LFS 258
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 26.9 bits (58), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 35 KISSIFTFLWLRKVQNMAKIDTMTKG-----VLWLFLKVILGIPYDFGIDLWSAGCTIYE 89
+I+ I F R ++N + + + KG V W+ + I Y F D+WS G ++E
Sbjct: 200 RITKICDFGLARDIKNDS--NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE 257
Query: 90 LYT 92
L++
Sbjct: 258 LFS 260
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 26.9 bits (58), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 35 KISSIFTFLWLRKVQNMAKIDTMTKG-----VLWLFLKVILGIPYDFGIDLWSAGCTIYE 89
+I+ I F R ++N + + + KG V W+ + I Y F D+WS G ++E
Sbjct: 205 RITKICDFGLARDIKNDS--NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE 262
Query: 90 LYT 92
L++
Sbjct: 263 LFS 265
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 26.9 bits (58), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + F G N+ L
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 236
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 26.9 bits (58), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + F G N+ L
Sbjct: 204 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 237
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 26.9 bits (58), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 35 KISSIFTFLWLRKVQNMAKIDTMTKG-----VLWLFLKVILGIPYDFGIDLWSAGCTIYE 89
+I+ I F R ++N + + + KG V W+ + I Y F D+WS G ++E
Sbjct: 182 RITKICDFGLARDIKNDS--NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE 239
Query: 90 LYT 92
L++
Sbjct: 240 LFS 242
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 26.9 bits (58), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 35 KISSIFTFLWLRKVQNMAKIDTMTKG-----VLWLFLKVILGIPYDFGIDLWSAGCTIYE 89
+I+ I F R ++N + + + KG V W+ + I Y F D+WS G ++E
Sbjct: 205 RITKICDFGLARHIKNDS--NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE 262
Query: 90 LYT 92
L++
Sbjct: 263 LFS 265
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 26.9 bits (58), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + F G N+ L
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 236
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 26.9 bits (58), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + F G N+ L
Sbjct: 204 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 237
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 26.9 bits (58), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + F G N+ L
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 236
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 26.9 bits (58), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/105 (20%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Query: 45 LRKVQNMAKIDTMTKGVL-WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNN 103
L K+++ + + G ++ +V+ PY +D WS G Y L G F +++
Sbjct: 165 LSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA 224
Query: 104 QMLKFFMDLKGKFPNKVIRKGQFKDQHFDSHCNFQYHEVDKVTER 148
++ + + + +F + + D DS +F H ++K E+
Sbjct: 225 KLFEQILKAEYEFDSP------YWDDISDSAKDFIRHLMEKDPEK 263
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 26.9 bits (58), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + F G N+ L
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 236
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 26.9 bits (58), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 61 VLWLFLKVILGIPYDFGIDLWSAGCTIYELYT-GKIMFSGKSNNQMLK 107
V W +V Y D+WS G ++E+++ GKI + +SN+++++
Sbjct: 169 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 216
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 26.9 bits (58), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + F G N+ L
Sbjct: 224 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 257
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 26.9 bits (58), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + F G N+ L
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 236
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 26.9 bits (58), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + F G N+ L
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 236
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 26.9 bits (58), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 74 YDFGIDLWSAGCTIYEL-YTGKIMFSGKSNNQML 106
YD+ +D+WS GC + + + F G N+ L
Sbjct: 205 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 238
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 26.9 bits (58), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDL-KGKF 116
YD G D+WS G +Y + G F+ ++ + + GKF
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKF 245
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 26.9 bits (58), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQF 126
+V+ PY +D WS G Y L G F +++ ++ + + + +F + +
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSP------Y 241
Query: 127 KDQHFDSHCNFQYHEVDKVTER 148
D DS +F H ++K E+
Sbjct: 242 WDDISDSAKDFIRHLMEKDPEK 263
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 26.9 bits (58), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 61 VLWLFLKVILGIPYDFGIDLWSAGCTIYELYT-GKIMFSGKSNNQMLK 107
V W +V Y D+WS G ++E+++ GKI + +SN+++++
Sbjct: 168 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 215
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 26.9 bits (58), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 61 VLWLFLKVILGIPYDFGIDLWSAGCTIYELYT-GKIMFSGKSNNQMLK 107
V W +V Y D+WS G ++E+++ GKI + +SN+++++
Sbjct: 166 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 213
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 26.9 bits (58), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 61 VLWLFLKVILGIPYDFGIDLWSAGCTIYELYT-GKIMFSGKSNNQMLK 107
V W +V Y D+WS G ++E+++ GKI + +SN+++++
Sbjct: 171 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 218
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 26.6 bits (57), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 61 VLWLFLKVILGIPYDFGIDLWSAGCTIYELYT-GKIMFSGKSNNQMLK 107
V W +V Y D+WS G ++E+++ GKI + +SN+++++
Sbjct: 168 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 215
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 26.6 bits (57), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 67 KVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQF 126
+V+ PY +D WS G Y L G F +++ ++ + + + +F + +
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSP------Y 241
Query: 127 KDQHFDSHCNFQYHEVDKVTER 148
D DS +F H ++K E+
Sbjct: 242 WDDISDSAKDFIRHLMEKDPEK 263
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 26.6 bits (57), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 74 YDFGIDLWSAGCTIYELYTGKIMF 97
YD D+WS G ++ EL TG+ +
Sbjct: 206 YDIRADVWSLGISLVELATGQFPY 229
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 26.6 bits (57), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 74 YDFGIDLWSAGCTIYELYT-GKIMFSGKSNNQMLK 107
Y D+WS G ++E+++ GKI + +SN+++++
Sbjct: 201 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 235
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 26.6 bits (57), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/105 (20%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Query: 45 LRKVQNMAKIDTMTKGVL-WLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNN 103
L K+++ + + G ++ +V+ PY +D WS G Y L G F +++
Sbjct: 165 LSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA 224
Query: 104 QMLKFFMDLKGKFPNKVIRKGQFKDQHFDSHCNFQYHEVDKVTER 148
++ + + + +F + + D DS +F H ++K E+
Sbjct: 225 KLFEQILKAEYEFDSP------YWDDISDSAKDFIRHLMEKDPEK 263
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 26.6 bits (57), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 61 VLWLFLKVILGIPYDFGIDLWSAGCTIYELYT-GKIMFSGKSNNQMLKFFM 110
V W+ ++ + Y D+W+ G T++E+ T G + G N++M + +
Sbjct: 213 VKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLL 263
>pdb|1JYK|A Chain A, Catalytic Mechanism Of Ctp:phosphocholine
Cytidylytransferase From Streptococcus Pneumoniae (Licc)
Length = 254
Score = 26.6 bits (57), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 116 FPNKVIRKGQFKDQHFDSHCNFQYHEVDKVTERVSIKLIFQINFRNPYTKWTRLLKG 172
F +K G+F D ++D+ E+D E + I++I+ Y K +LK
Sbjct: 196 FIDKAYVSGEFVDLYWDNXVKDNIKELDVYVEELEGNSIYEIDSVQDYRKLEEILKN 252
>pdb|3G60|A Chain A, Structure Of P-Glycoprotein Reveals A Molecular Basis For
Poly-Specific Drug Binding
pdb|3G60|B Chain B, Structure Of P-Glycoprotein Reveals A Molecular Basis For
Poly-Specific Drug Binding
pdb|3G61|A Chain A, Structure Of P-Glycoprotein Reveals A Molecular Basis For
Poly-Specific Drug Binding
pdb|3G61|B Chain B, Structure Of P-Glycoprotein Reveals A Molecular Basis For
Poly-Specific Drug Binding
Length = 1284
Score = 26.6 bits (57), Expect = 8.7, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 40/105 (38%)
Query: 8 IKGVLGMAIPKSWYLHTKKKLEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLK 67
I GV+ M + L KK+LE G + +I F + + K +TM L + +
Sbjct: 866 IAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYR 925
Query: 68 VILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDL 112
+ + FGI +Y Y F Q L F ++
Sbjct: 926 NAMKKAHVFGITFSFTQAMMYFSYAACFRFGAYLVTQQLMTFENV 970
>pdb|1JYL|A Chain A, Catalytic Mechanism Of Ctp:phosphocholine
Cytidylytransferase From Streptococcus Pneumoniae (Licc)
pdb|1JYL|B Chain B, Catalytic Mechanism Of Ctp:phosphocholine
Cytidylytransferase From Streptococcus Pneumoniae (Licc)
pdb|1JYL|C Chain C, Catalytic Mechanism Of Ctp:phosphocholine
Cytidylytransferase From Streptococcus Pneumoniae (Licc)
pdb|1JYL|D Chain D, Catalytic Mechanism Of Ctp:phosphocholine
Cytidylytransferase From Streptococcus Pneumoniae (Licc)
Length = 254
Score = 26.6 bits (57), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 116 FPNKVIRKGQFKDQHFDSHCNFQYHEVDKVTERVSIKLIFQINFRNPYTKWTRLLKG 172
F +K G+F D ++D+ E+D E + I++I+ Y K +LK
Sbjct: 196 FIDKAYVSGEFVDLYWDNMVKDNIKELDVYVEELEGNSIYEIDSVQDYRKLEEILKN 252
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 26.6 bits (57), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 63 WLFLKVILGIPYDFGIDLWSAGCTIYELYT 92
W+ L+ IL + D+WS G T++EL T
Sbjct: 187 WMALESILRRRFTHQSDVWSYGVTVWELMT 216
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.326 0.141 0.445
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,730,006
Number of Sequences: 62578
Number of extensions: 235091
Number of successful extensions: 1293
Number of sequences better than 100.0: 613
Number of HSP's better than 100.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 756
Number of HSP's gapped (non-prelim): 613
length of query: 185
length of database: 14,973,337
effective HSP length: 93
effective length of query: 92
effective length of database: 9,153,583
effective search space: 842129636
effective search space used: 842129636
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 48 (23.1 bits)