Diaphorina citri psyllid: psy17423


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-----
MAKIGTMIKGVLGMAIPKSWYLHTKKKLEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQFKDQHFDSHCNFQYHEVDKVTERVSIKLIFQINFRNPYTKWTRLLKGPAFVIRTQSGQGH
cHHHHHHHHHHHcccccccEEEcccccccccccEEEEEccccccHHHcccccccccEEEcccccccHHHHcccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccccHHHHHHccccccccccccccEEEECcccccEEEEEEEEEEcccccccHHHHHcccccccccccccccc
****GTMIKGVLGMAIPKSWYLHTKKKLEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQFKDQHFDSHCNFQYHEVDKVTERVSIKLIFQINFRNPYTKWTRLLKGPAFVIR*******
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MAKIGTMIKGVLGMAIPKSWYLHTKKKLEIDGVVKISSIFTFLWLRKVQNMAKIDTMTKGVLWLFLKVILGIPYDFGIDLWSAGCTIYELYTGKIMFSGKSNNQMLKFFMDLKGKFPNKVIRKGQFKDQHFDSHCNFQYHEVDKVTERVSIKLIFQINFRNPYTKWTRLLKGPAFVIRTQSGQGH

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Serine/threonine-protein kinase PRP4 homolog Has a role in pre-mRNA splicing. Phosphorylates SF2/ASF.confidentQ13523
Serine/threonine-protein kinase PRP4 homolog Has a role in pre-mRNA splicing. Phosphorylates SF2/ASF.confidentQ5R814
Serine/threonine-protein kinase PRP4 homolog Has a role in pre-mRNA splicing. Phosphorylates SF2/ASF.confidentQ5RKH1

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0071011 [CC]precatalytic spliceosomeprobableGO:0005575, GO:0032991, GO:0043231, GO:0005634, GO:0044464, GO:0005623, GO:0030529, GO:0044446, GO:0043229, GO:0044428, GO:0044422, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0005681
GO:0071013 [CC]catalytic step 2 spliceosomeprobableGO:0005575, GO:0032991, GO:0043231, GO:0005634, GO:0044464, GO:0005623, GO:0030529, GO:0044446, GO:0043229, GO:0044428, GO:0044422, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0005681
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0008360 [BP]regulation of cell shapeprobableGO:0022604, GO:0022603, GO:0050793, GO:0051128, GO:0065007, GO:0008150, GO:0065008, GO:0050789, GO:0050794
GO:0005488 [MF]bindingprobableGO:0003674
GO:0006468 [BP]protein phosphorylationprobableGO:0044267, GO:0044260, GO:0044238, GO:0019538, GO:0016310, GO:0009987, GO:0043412, GO:0006464, GO:0043170, GO:0071704, GO:0006796, GO:0036211, GO:0008150, GO:0044237, GO:0008152, GO:0006793
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0004674 [MF]protein serine/threonine kinase activityprobableGO:0016773, GO:0016772, GO:0016301, GO:0003824, GO:0016740, GO:0003674, GO:0004672
GO:0022008 [BP]neurogenesisprobableGO:0032502, GO:0048856, GO:0044707, GO:0007399, GO:0048869, GO:0030154, GO:0008150, GO:0032501, GO:0044763, GO:0048731, GO:0009987, GO:0007275, GO:0044699
GO:0006396 [BP]RNA processingprobableGO:0016070, GO:0006139, GO:0044260, GO:0044238, GO:0009987, GO:0006725, GO:0034641, GO:0044237, GO:0043170, GO:0090304, GO:0071704, GO:0010467, GO:0006807, GO:0008150, GO:0008152, GO:1901360, GO:0046483
GO:0005694 [CC]chromosomeprobableGO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623
GO:0007155 [BP]cell adhesionprobableGO:0008150, GO:0009987, GO:0022610, GO:0044763, GO:0044699

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2VX3, chain A
Confidence level:very confident
Coverage over the Query: 8-177
View the alignment between query and template
View the model in PyMOL