RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17424
(117 letters)
>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare
(Aplysia californica), twk43 [TaxId: 6500]}
Length = 352
Score = 49.7 bits (118), Expect = 8e-09
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 9/93 (9%)
Query: 25 VVALKII-KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL- 82
V K I + + EI+ + ++ P + + D F+ M + E L
Sbjct: 56 VFVAKFINTPYPLDKYTVKNEISIMNQL--HHPK----LINLHDAFEDKYEMVLILEFLS 109
Query: 83 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAVQ 115
G +FD + +Y S +V + Q ++
Sbjct: 110 GGELFDRIAAEDY-KMSEAEVINYMRQACEGLK 141
>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 307
Score = 49.3 bits (117), Expect = 1e-08
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 25 VVALKIIK--NVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 82
+VA+K I +E + EI L KI K PN V + D ++ GH+ + +++
Sbjct: 36 LVAIKCIAKKALEGKEGSMENEIAVLHKI--KHPN----IVALDDIYESGGHLYLIMQLV 89
Query: 83 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAVQ 115
G +FD + E + + +Q++ AV+
Sbjct: 90 SGGELFDRIVEKGFYT--ERDASRLIFQVLDAVK 121
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase
kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId:
9986]}
Length = 277
Score = 48.5 bits (115), Expect = 1e-08
Identities = 21/102 (20%), Positives = 45/102 (44%), Gaps = 18/102 (17%)
Query: 25 VVALKIIK----------NVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGH 74
A+KII V++ REA E++ L+K+ +G +++ D ++ +
Sbjct: 30 EYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV-----SGHPNIIQLKDTYETNTF 84
Query: 75 MCIAFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAVQ 115
+ F+++ +FD+L E L + R + L+ +
Sbjct: 85 FFLVFDLMKKGELFDYLTEKVTLS--EKETRKIMRALLEVIC 124
>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain
{Caenorhabditis elegans, pjk4 [TaxId: 6239]}
Length = 350
Score = 48.5 bits (115), Expect = 2e-08
Identities = 18/93 (19%), Positives = 36/93 (38%), Gaps = 9/93 (9%)
Query: 25 VVALKII-KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL- 82
A K + E +E R EI + + + P V + D F+ M + +E +
Sbjct: 53 NFAAKFVMTPHESDKETVRKEIQTMSVL--RHPT----LVNLHDAFEDDNEMVMIYEFMS 106
Query: 83 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAVQ 115
G +F+ + + + S D+ Q+ +
Sbjct: 107 GGELFEKVADEHN-KMSEDEAVEYMRQVCKGLC 138
>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 321
Score = 48.1 bits (114), Expect = 2e-08
Identities = 15/92 (16%), Positives = 38/92 (41%), Gaps = 8/92 (8%)
Query: 25 VVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL-G 83
K +K + + EI+ L + N + + + F+ + + FE + G
Sbjct: 32 TYMAKFVKVKGTDQVLVKKEISILNIA--RHRN----ILHLHESFESMEELVMIFEFISG 85
Query: 84 LSVFDFLKENNYLPYSLDQVRHMSYQLIYAVQ 115
L +F+ + + + + ++ +Q+ A+Q
Sbjct: 86 LDIFERINTSAF-ELNEREIVSYVHQVCEALQ 116
>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein
kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}
Length = 288
Score = 47.7 bits (113), Expect = 3e-08
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Query: 25 VVALKII-KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILG 83
+ A K+I E+ E +EI+ L PN VK+LD F Y ++ I E
Sbjct: 39 LAAAKVIDTKSEEELEDYMVEIDILASC--DHPN----IVKLLDAFYYENNLWILIEFCA 92
Query: 84 LSVFDFLKENNYLPYSLDQVRHMSYQLIYAVQ 115
D + P + Q++ + Q + A+
Sbjct: 93 GGAVDAVMLELERPLTESQIQVVCKQTLDALN 124
>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2,
mapkap2 {Human (Homo sapiens) [TaxId: 9606]}
Length = 335
Score = 45.9 bits (108), Expect = 1e-07
Identities = 16/96 (16%), Positives = 40/96 (41%), Gaps = 14/96 (14%)
Query: 25 VVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDY----HGHMCIAFE 80
ALK++++ K R E+ + + P+ V+++D ++ + I E
Sbjct: 39 KFALKMLQDCPKARR----EVELHWRA-SQCPH----IVRIVDVYENLYAGRKCLLIVME 89
Query: 81 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAVQ 115
L G +F +++ ++ + + + A+Q
Sbjct: 90 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 125
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein
kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 322
Score = 45.4 bits (107), Expect = 2e-07
Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 11/94 (11%)
Query: 25 VVALKIIK--NVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL 82
V+A K+I R E+ L + P V F G + I E +
Sbjct: 33 VMARKLIHLEIKPAIRNQIIRELQVLHEC--NSPY----IVGFYGAFYSDGEISICMEHM 86
Query: 83 -GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAVQ 115
G S+ LK+ +P + +S +I +
Sbjct: 87 DGGSLDQVLKKAGRIP--EQILGKVSIAVIKGLT 118
>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 262
Score = 44.2 bits (104), Expect = 5e-07
Identities = 20/95 (21%), Positives = 41/95 (43%), Gaps = 9/95 (9%)
Query: 23 DSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWF-DYHGHMCIAFEI 81
+ VA+K IKN + +A E + + ++ + N V++L + G + I E
Sbjct: 30 GNKVAVKCIKN-DATAQAFLAEASVMTQL--RHSN----LVQLLGVIVEEKGGLYIVTEY 82
Query: 82 L-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAVQ 115
+ S+ D+L+ D + S + A++
Sbjct: 83 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 117
>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 298
Score = 44.1 bits (103), Expect = 6e-07
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 9/94 (9%)
Query: 25 VVALKIIK---NVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEI 81
VVALK I+ E A EI+ L+++ PN VK+LD + + FE
Sbjct: 29 VVALKKIRLDTETEGVPSTAIREISLLKEL--NHPN----IVKLLDVIHTENKLYLVFEF 82
Query: 82 LGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAVQ 115
L + F+ + L ++ +QL+ +
Sbjct: 83 LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein
kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 273
Score = 43.9 bits (103), Expect = 8e-07
Identities = 20/100 (20%), Positives = 39/100 (39%), Gaps = 15/100 (15%)
Query: 25 VVALKIIK-------NVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCI 77
VA+K ++ +E+ L+K+ +++LDWF+ +
Sbjct: 31 PVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG----VIRLLDWFERPDSFVL 86
Query: 78 AFEIL--GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAVQ 115
E +FDF+ E L + R +Q++ AV+
Sbjct: 87 ILERPEPVQDLFDFITERGALQ--EELARSFFWQVLEAVR 124
>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 293
Score = 41.9 bits (98), Expect = 4e-06
Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 11/93 (11%)
Query: 25 VVALKII-KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL- 82
VA++ + + +E EI +++ K+PN V LD + + + E L
Sbjct: 47 EVAIRQMNLQQQPKKELIINEILVMREN--KNPN----IVNYLDSYLVGDELWVVMEYLA 100
Query: 83 GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAVQ 115
G S+ D + E Q+ + + + A++
Sbjct: 101 GGSLTDVVTET---CMDEGQIAAVCRECLQALE 130
>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 362
Score = 41.6 bits (96), Expect = 4e-06
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 25 VVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLC-----VKMLDWFDYHG----HM 75
VA+KI++ + Y EAA EI LQ++ + D +K+LD F++ G H+
Sbjct: 40 HVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHV 99
Query: 76 CIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAVQ 115
+ FE+LG ++ +K+ + L V+ +S QL+ +
Sbjct: 100 VMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLD 139
>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 272
Score = 41.6 bits (97), Expect = 5e-06
Identities = 17/103 (16%), Positives = 40/103 (38%), Gaps = 6/103 (5%)
Query: 13 SRVSRTVSRVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH 72
V + VA+K +K +A E N ++++ + V++
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--QHQR----LVRLYAVVTQE 80
Query: 73 GHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAVQ 115
I + S+ DFLK + + +++++ M+ Q+ +
Sbjct: 81 PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 287
Score = 40.9 bits (95), Expect = 9e-06
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 25 VVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEIL-G 83
VA+K +K E E +++I K PN V++L I E +
Sbjct: 44 TVAVKTLKEDTMEVEEFLKEAAVMKEI--KHPN----LVQLLGVCTREPPFYIITEFMTY 97
Query: 84 LSVFDFLKENNYLPYSLDQVRHMSYQLIYAVQ 115
++ D+L+E N S + +M+ Q+ A++
Sbjct: 98 GNLLDYLRECNRQEVSAVVLLYMATQISSAME 129
>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 285
Score = 39.7 bits (92), Expect = 2e-05
Identities = 19/103 (18%), Positives = 35/103 (33%), Gaps = 6/103 (5%)
Query: 13 SRVSRTVSRVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH 72
V + VA+K +K EA E ++K+ + V++
Sbjct: 31 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL--RHEK----LVQLYAVVSEE 84
Query: 73 GHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAVQ 115
+ + S+ DFLK L Q+ M+ Q+ +
Sbjct: 85 PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 127
>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium
falciparum) [TaxId: 5833]}
Length = 286
Score = 39.5 bits (91), Expect = 2e-05
Identities = 21/106 (19%), Positives = 34/106 (32%), Gaps = 10/106 (9%)
Query: 13 SRVSRTVSRVDSVVALKII---KNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWF 69
V + + ALK I K E EI+ L+++ K N VK+ D
Sbjct: 16 GVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKEL--KHSN----IVKLYDVI 69
Query: 70 DYHGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAVQ 115
+ + FE L + L + QL+ +
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEG-GLESVTAKSFLLQLLNGIA 114
>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 299
Score = 39.5 bits (91), Expect = 3e-05
Identities = 18/97 (18%), Positives = 41/97 (42%), Gaps = 13/97 (13%)
Query: 25 VVALKIIK------NVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIA 78
+VA+K IK + A EI LQ++ PN + +LD F + ++ +
Sbjct: 25 IVAIKKIKLGHRSEAKDGINRTALREIKLLQEL--SHPN----IIGLLDAFGHKSNISLV 78
Query: 79 FEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAVQ 115
F+ + + +K+N+ + ++ + ++
Sbjct: 79 FDFMETDLEVIIKDNSL-VLTPSHIKAYMLMTLQGLE 114
>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo
sapiens) [TaxId: 9606]}
Length = 263
Score = 38.9 bits (90), Expect = 3e-05
Identities = 14/103 (13%), Positives = 29/103 (28%), Gaps = 6/103 (5%)
Query: 13 SRVSRTVSRVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH 72
V VA+K I+ E E + K+ P V++
Sbjct: 19 GLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL--SHPK----LVQLYGVCLEQ 72
Query: 73 GHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAVQ 115
+C+ FE + ++ + + M + +
Sbjct: 73 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 115
>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo
sapiens) [TaxId: 9606]}
Length = 277
Score = 38.9 bits (90), Expect = 4e-05
Identities = 19/108 (17%), Positives = 46/108 (42%), Gaps = 11/108 (10%)
Query: 11 TVSRVSRTVSRVDSVVALKIIKNV---EKYREAARLEINALQKIGEKDPNGRHLCVKMLD 67
TV + + +V VA+KI+KN ++ E N +Q++ +P V+M+
Sbjct: 22 TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL--DNPY----IVRMIG 75
Query: 68 WFDYHGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAVQ 115
+ M + + +L++N ++ + + +Q+ ++
Sbjct: 76 ICEAESWMLVMEMAELGPLNKYLQQNRHVK--DKNIIELVHQVSMGMK 121
>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 350
Score = 38.6 bits (89), Expect = 5e-05
Identities = 14/99 (14%), Positives = 40/99 (40%), Gaps = 17/99 (17%)
Query: 25 VVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHG------HMCIA 78
+VA+K + ++++ E+ ++K+ N V++ +F G ++ +
Sbjct: 47 LVAIKKVLQDKRFKNR---ELQIMRKL--DHCN----IVRLRYFFYSSGEKKDEVYLNLV 97
Query: 79 FEILGLSVFDFLKE--NNYLPYSLDQVRHMSYQLIYAVQ 115
+ + +V+ + + V+ YQL ++
Sbjct: 98 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 258
Score = 38.5 bits (89), Expect = 6e-05
Identities = 14/103 (13%), Positives = 28/103 (27%), Gaps = 6/103 (5%)
Query: 13 SRVSRTVSRVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYH 72
V R VA+K+IK + E + + V++
Sbjct: 18 GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL--SHEK----LVQLYGVCTKQ 71
Query: 73 GHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAVQ 115
+ I E + + Q+ M + A++
Sbjct: 72 RPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 114
>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 263
Score = 37.3 bits (86), Expect = 1e-04
Identities = 11/96 (11%), Positives = 32/96 (33%), Gaps = 13/96 (13%)
Query: 25 VVALKIIKNV----EKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 80
++ALK++ R E+ + +++ +F + + E
Sbjct: 33 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------HPNILRLYGYFHDATRVYLILE 86
Query: 81 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAVQ 115
+V+ L++ + + + +L A+
Sbjct: 87 YAPLGTVYRELQKLS--KFDEQRTATYITELANALS 120
>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein
kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 288
Score = 37.3 bits (86), Expect = 2e-04
Identities = 11/96 (11%), Positives = 31/96 (32%), Gaps = 13/96 (13%)
Query: 25 VVALKIIK----NVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 80
A+KI++ E E + + ++ P VK+ F +
Sbjct: 35 EYAIKILEKRHIIKENKVPYVTRERDVMSRL--DHPF----FVKLYFTFQDDEKLYFGLS 88
Query: 81 IL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAVQ 115
+ ++++ R + +++ A++
Sbjct: 89 YAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALE 122
>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human
(Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 34.7 bits (79), Expect = 0.001
Identities = 20/99 (20%), Positives = 40/99 (40%), Gaps = 16/99 (16%)
Query: 25 VVALKIIK-------NVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCI 77
A K IK RE E++ L++I + PN + + + ++ + +
Sbjct: 37 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI--QHPN----VITLHEVYENKTDVIL 90
Query: 78 AFEIL-GLSVFDFLKENNYLPYSLDQVRHMSYQLIYAVQ 115
E++ G +FDFL E + ++ Q++ V
Sbjct: 91 ILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVY 127
>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit
{Rattus norvegicus [TaxId: 10116]}
Length = 328
Score = 34.8 bits (79), Expect = 0.001
Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 9/91 (9%)
Query: 25 VVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILGL 84
V +KI+K V+K + + EI L+ + PN + + D A +
Sbjct: 62 KVVVKILKPVKKKK--IKREIKILENLR-GGPN----IITLADIVKDPVSRTPALVFEHV 114
Query: 85 SVFDFLKENNYLPYSLDQVRHMSYQLIYAVQ 115
+ DF + L +R Y+++ A+
Sbjct: 115 NNTDFKQLYQTLT--DYDIRFYMYEILKALD 143
>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 303
Score = 31.4 bits (70), Expect = 0.018
Identities = 12/93 (12%), Positives = 29/93 (31%), Gaps = 6/93 (6%)
Query: 23 DSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE-I 81
VA+KI + E+ EI + + N + + +
Sbjct: 26 GEEVAVKIFSSREERSWFREAEIYQTVML--RHENILGFIAADNKDNGTWTQLWLVSDYH 83
Query: 82 LGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAV 114
S+FD+L +++ + ++ +
Sbjct: 84 EHGSLFDYLNRY---TVTVEGMIKLALSTASGL 113
>d2ts1a_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Bacillus
stearothermophilus, nca 1503 [TaxId: 1422]}
Length = 319
Score = 28.1 bits (62), Expect = 0.21
Identities = 6/52 (11%), Positives = 11/52 (21%)
Query: 65 MLDWFDYHGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAVQD 116
+ F GH IA + + ++ Q
Sbjct: 54 TMRRFQQAGHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQL 105
>d1ff4a_ g.7.1.1 (A:) Muscarinic toxin {Green mamba (Dendroaspis
angusticeps) [TaxId: 8618]}
Length = 65
Score = 24.3 bits (53), Expect = 1.6
Identities = 4/18 (22%), Positives = 8/18 (44%)
Query: 56 PNGRHLCVKMLDWFDYHG 73
P G+++C K +
Sbjct: 18 PAGQNVCFKRWHYVTPKN 35
>d1jila_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS)
{Staphylococcus aureus [TaxId: 1280]}
Length = 323
Score = 23.6 bits (50), Expect = 7.7
Identities = 7/31 (22%), Positives = 9/31 (29%)
Query: 65 MLDWFDYHGHMCIAFEILGLSVFDFLKENNY 95
L F HGH I G + +
Sbjct: 55 TLRRFQEHGHRPIVLIGGGTGMIGDPSGKSE 85
>d1j99a_ c.37.1.5 (A:) Hydroxysteroid sulfotransferase sult2a1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 284
Score = 23.7 bits (50), Expect = 8.3
Identities = 8/36 (22%), Positives = 11/36 (30%)
Query: 59 RHLCVKMLDWFDYHGHMCIAFEILGLSVFDFLKENN 94
K+ + IL S F +KEN
Sbjct: 191 GRTIEKICQFLGKTLEPEELNLILKNSSFQSMKENK 226
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 295
Score = 23.7 bits (50), Expect = 8.4
Identities = 9/53 (16%), Positives = 14/53 (26%), Gaps = 3/53 (5%)
Query: 34 VEKYREAARLEINALQKIGEKDPNG---RHLCVKMLDWFDYHGHMCIAFEILG 83
+REAA + + G +C K+ D L
Sbjct: 57 WNDFREAAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGLNAGLA 109
>d2fiua1 d.58.4.16 (A:1-95) Hypothetical protein Atu0297
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 95
Score = 22.8 bits (49), Expect = 8.7
Identities = 10/56 (17%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Query: 25 VVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFE 80
+A +++ E+Y++ A ++ G R V L+ ++ I F
Sbjct: 6 WIAQVDVRDSERYKDYVSTAKPAFERFGAN-FLARGGSVTELEGTARARNVVIEFP 60
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.324 0.137 0.398
Gapped
Lambda K H
0.267 0.0478 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 437,005
Number of extensions: 19176
Number of successful extensions: 117
Number of sequences better than 10.0: 1
Number of HSP's gapped: 116
Number of HSP's successfully gapped: 44
Length of query: 117
Length of database: 2,407,596
Length adjustment: 74
Effective length of query: 43
Effective length of database: 1,391,576
Effective search space: 59837768
Effective search space used: 59837768
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (22.5 bits)