Query psy17425
Match_columns 84
No_of_seqs 131 out of 1404
Neff 8.0
Searched_HMMs 46136
Date Fri Aug 16 22:08:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17425.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/17425hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0670|consensus 99.6 2.4E-15 5.1E-20 110.6 7.1 81 3-83 672-752 (752)
2 KOG0615|consensus 99.2 1.1E-11 2.4E-16 89.0 2.6 78 5-82 341-442 (475)
3 KOG0575|consensus 99.1 4.6E-11 1E-15 88.5 4.0 76 7-82 183-274 (592)
4 KOG0033|consensus 99.1 3.8E-11 8.2E-16 82.4 2.8 56 27-82 197-272 (355)
5 KOG0588|consensus 99.1 7.9E-11 1.7E-15 88.5 4.2 80 4-83 173-269 (786)
6 KOG1290|consensus 98.9 1E-09 2.2E-14 80.5 4.2 69 9-81 486-554 (590)
7 KOG0032|consensus 98.9 1E-09 2.3E-14 78.4 3.9 80 3-82 199-298 (382)
8 PTZ00284 protein kinase; Provi 98.9 9E-10 2E-14 79.3 2.0 31 53-83 414-444 (467)
9 cd07848 STKc_CDKL5 Catalytic d 98.9 1.4E-09 3E-14 72.8 2.8 28 53-80 260-287 (287)
10 KOG0581|consensus 98.8 5.2E-09 1.1E-13 74.1 4.2 80 3-82 238-340 (364)
11 KOG0610|consensus 98.8 2.4E-09 5.2E-14 77.1 2.1 76 7-82 300-397 (459)
12 KOG0592|consensus 98.8 4E-09 8.6E-14 78.0 3.1 52 31-82 276-343 (604)
13 cd05571 STKc_PKB Catalytic dom 98.8 8.1E-09 1.8E-13 70.9 4.2 77 6-82 159-256 (323)
14 KOG0198|consensus 98.7 1.5E-08 3.3E-13 70.9 4.6 65 15-82 208-281 (313)
15 cd06649 PKc_MEK2 Catalytic dom 98.7 7.3E-09 1.6E-13 71.3 1.8 31 52-82 276-306 (331)
16 PTZ00263 protein kinase A cata 98.7 1.4E-08 3E-13 70.0 2.8 54 29-82 202-276 (329)
17 cd07871 STKc_PCTAIRE3 Catalyti 98.7 3.3E-08 7.1E-13 66.6 4.6 28 53-80 261-288 (288)
18 cd07876 STKc_JNK2 Catalytic do 98.7 1.5E-08 3.3E-13 70.3 3.0 31 52-82 290-320 (359)
19 cd05585 STKc_YPK1_like Catalyt 98.7 1.8E-08 3.9E-13 68.8 3.2 55 28-82 179-252 (312)
20 cd07869 STKc_PFTAIRE1 Catalyti 98.7 2.8E-08 6E-13 67.3 4.1 31 52-82 263-293 (303)
21 KOG0605|consensus 98.7 1.1E-08 2.4E-13 75.3 2.2 75 7-82 353-450 (550)
22 KOG0583|consensus 98.7 1.9E-08 4.2E-13 71.6 3.3 75 8-82 187-280 (370)
23 cd05590 STKc_nPKC_eta Catalyti 98.7 1.6E-08 3.4E-13 69.5 2.7 53 30-82 184-258 (320)
24 KOG0604|consensus 98.6 3.1E-08 6.7E-13 69.6 3.6 58 26-83 247-328 (400)
25 KOG0580|consensus 98.6 1.9E-08 4.1E-13 68.5 2.3 79 4-82 184-278 (281)
26 cd05593 STKc_PKB_gamma Catalyt 98.6 4.3E-08 9.4E-13 67.6 4.0 76 7-82 160-256 (328)
27 KOG0578|consensus 98.6 3.1E-08 6.8E-13 73.2 3.3 56 26-81 453-527 (550)
28 cd07875 STKc_JNK1 Catalytic do 98.6 2E-08 4.3E-13 69.9 2.2 30 53-82 294-323 (364)
29 cd07863 STKc_CDK4 Catalytic do 98.6 2.8E-08 6E-13 66.4 2.7 28 53-80 261-288 (288)
30 cd07868 STKc_CDK8 Catalytic do 98.6 1.6E-08 3.4E-13 68.7 1.5 28 53-80 290-317 (317)
31 cd05612 STKc_PRKX_like Catalyt 98.6 1.5E-08 3.3E-13 68.5 1.4 52 31-82 187-259 (291)
32 cd05631 STKc_GRK4 Catalytic do 98.6 1.9E-08 4.2E-13 67.7 1.8 52 31-82 190-266 (285)
33 cd05620 STKc_nPKC_delta Cataly 98.6 2.8E-08 6.1E-13 68.1 2.6 53 30-82 184-253 (316)
34 KOG0598|consensus 98.6 2.3E-08 5E-13 70.8 2.1 79 4-82 187-286 (357)
35 cd07862 STKc_CDK6 Catalytic do 98.6 3E-08 6.6E-13 66.4 2.6 28 53-80 263-290 (290)
36 cd05591 STKc_nPKC_epsilon Cata 98.6 5.1E-08 1.1E-12 66.8 3.4 53 30-82 184-259 (321)
37 cd07878 STKc_p38beta_MAPK11 Ca 98.6 4E-08 8.7E-13 67.7 2.9 30 53-82 274-303 (343)
38 PTZ00036 glycogen synthase kin 98.6 5.3E-08 1.2E-12 70.0 3.6 31 52-82 326-356 (440)
39 cd07873 STKc_PCTAIRE1 Catalyti 98.6 9.3E-08 2E-12 64.6 4.6 30 53-82 262-291 (301)
40 cd07859 STKc_TDY_MAPK_plant Ca 98.6 7.8E-08 1.7E-12 65.6 4.3 30 53-82 266-295 (338)
41 cd06625 STKc_MEKK3_like Cataly 98.6 5.1E-08 1.1E-12 64.1 2.9 49 32-80 197-263 (263)
42 cd07872 STKc_PCTAIRE2 Catalyti 98.6 8.3E-08 1.8E-12 65.2 4.0 31 52-82 261-291 (309)
43 KOG0660|consensus 98.6 7.6E-08 1.6E-12 68.1 3.8 31 53-83 286-316 (359)
44 cd07874 STKc_JNK3 Catalytic do 98.5 3.3E-08 7.2E-13 68.5 2.0 30 53-82 287-316 (355)
45 cd05584 STKc_p70S6K Catalytic 98.5 8.9E-08 1.9E-12 65.7 4.1 53 30-82 188-261 (323)
46 cd05594 STKc_PKB_alpha Catalyt 98.5 5.2E-08 1.1E-12 66.9 2.8 54 29-82 183-257 (325)
47 PTZ00426 cAMP-dependent protei 98.5 5.9E-08 1.3E-12 67.5 3.1 54 29-82 215-289 (340)
48 cd06650 PKc_MEK1 Catalytic dom 98.5 3.4E-08 7.3E-13 68.2 1.8 31 52-82 274-304 (333)
49 KOG0599|consensus 98.5 9.1E-08 2E-12 66.8 3.9 51 31-81 217-287 (411)
50 cd06628 STKc_MAPKKK_Byr2_like 98.5 7.2E-08 1.6E-12 63.7 3.2 49 32-80 202-267 (267)
51 cd05589 STKc_PKN Catalytic dom 98.5 8.2E-08 1.8E-12 65.9 3.5 52 31-82 190-262 (324)
52 cd05570 STKc_PKC Catalytic dom 98.5 4.5E-08 9.8E-13 67.1 2.1 52 31-82 185-257 (318)
53 cd07845 STKc_CDK10 Catalytic d 98.5 1E-07 2.2E-12 64.7 3.8 30 53-82 266-295 (309)
54 cd06636 STKc_MAP4K4_6 Catalyti 98.5 1.2E-07 2.5E-12 63.3 4.0 50 31-80 215-282 (282)
55 cd07831 STKc_MOK Catalytic dom 98.5 1.6E-07 3.4E-12 62.4 4.4 30 51-80 253-282 (282)
56 cd05619 STKc_nPKC_theta Cataly 98.5 5.3E-08 1.2E-12 66.8 2.2 52 31-82 185-253 (316)
57 cd06610 STKc_OSR1_SPAK Catalyt 98.5 5.6E-08 1.2E-12 63.9 2.1 50 31-80 196-267 (267)
58 cd08227 PK_STRAD_alpha Pseudok 98.5 1.3E-07 2.9E-12 64.8 4.0 31 52-82 282-312 (327)
59 cd06608 STKc_myosinIII_like Ca 98.5 1.7E-07 3.7E-12 61.7 4.3 49 32-80 208-275 (275)
60 cd07867 STKc_CDC2L6 Catalytic 98.5 1.4E-07 2.9E-12 64.0 3.8 28 53-80 290-317 (317)
61 cd05573 STKc_ROCK_NDR_like Cat 98.5 1.3E-07 2.8E-12 65.0 3.7 77 5-82 193-290 (350)
62 cd06637 STKc_TNIK Catalytic do 98.5 1.8E-07 3.8E-12 61.9 4.2 49 32-80 206-272 (272)
63 cd07860 STKc_CDK2_3 Catalytic 98.5 1.6E-07 3.5E-12 62.6 4.0 28 53-80 257-284 (284)
64 cd08218 STKc_Nek1 Catalytic do 98.5 1E-07 2.3E-12 62.5 3.0 50 31-80 190-256 (256)
65 cd05600 STKc_Sid2p_Dbf2p Catal 98.5 1.6E-07 3.6E-12 64.5 4.0 77 6-82 162-262 (333)
66 cd05630 STKc_GRK6 Catalytic do 98.5 4.9E-08 1.1E-12 65.8 1.3 52 31-82 190-266 (285)
67 cd05575 STKc_SGK Catalytic dom 98.5 1.3E-07 2.9E-12 64.8 3.4 54 29-82 183-256 (323)
68 cd06631 STKc_YSK4 Catalytic do 98.5 1.1E-07 2.3E-12 62.9 2.9 49 32-80 198-265 (265)
69 cd05595 STKc_PKB_beta Catalyti 98.5 1.2E-07 2.6E-12 65.2 3.1 53 30-82 183-256 (323)
70 KOG0694|consensus 98.5 7E-08 1.5E-12 72.8 2.0 74 9-82 535-629 (694)
71 cd05587 STKc_cPKC Catalytic do 98.5 1.1E-07 2.4E-12 65.2 2.7 52 31-82 190-262 (324)
72 PF00069 Pkinase: Protein kina 98.5 3.1E-07 6.8E-12 60.1 4.7 49 32-80 189-260 (260)
73 cd05605 STKc_GRK4_like Catalyt 98.5 1.2E-07 2.6E-12 63.8 2.8 52 31-82 190-266 (285)
74 cd08223 STKc_Nek4 Catalytic do 98.5 1.6E-07 3.5E-12 61.6 3.3 49 32-80 192-257 (257)
75 cd08225 STKc_Nek5 Catalytic do 98.5 9.9E-08 2.2E-12 62.5 2.3 49 32-80 192-257 (257)
76 KOG0596|consensus 98.5 2.2E-07 4.8E-12 69.3 4.3 54 29-82 559-632 (677)
77 cd05601 STKc_CRIK Catalytic do 98.5 1.9E-07 4E-12 64.1 3.7 51 31-82 198-268 (330)
78 cd05608 STKc_GRK1 Catalytic do 98.4 5.7E-08 1.2E-12 65.2 1.0 52 31-82 186-262 (280)
79 cd05586 STKc_Sck1_like Catalyt 98.4 1.5E-07 3.2E-12 64.7 3.0 52 31-82 186-258 (330)
80 cd07861 STKc_CDK1_euk Catalyti 98.4 3.1E-07 6.7E-12 61.2 4.4 28 53-80 258-285 (285)
81 cd07853 STKc_NLK Catalytic dom 98.4 2.6E-07 5.7E-12 64.5 4.1 30 53-82 264-293 (372)
82 cd07837 STKc_CdkB_plant Cataly 98.4 1.5E-07 3.3E-12 63.0 2.8 30 52-81 266-295 (295)
83 cd05582 STKc_RSK_N N-terminal 98.4 1.6E-07 3.5E-12 64.2 2.9 53 30-82 186-259 (318)
84 cd06609 STKc_MST3_like Catalyt 98.4 1.4E-07 3E-12 62.7 2.5 51 32-82 188-256 (274)
85 KOG0585|consensus 98.4 2.3E-07 5.1E-12 68.2 3.8 57 27-83 304-378 (576)
86 cd06612 STKc_MST1_2 Catalytic 98.4 3.2E-07 7E-12 60.0 4.2 49 32-80 189-256 (256)
87 cd05611 STKc_Rim15_like Cataly 98.4 1.1E-07 2.5E-12 62.6 2.0 52 31-82 182-256 (260)
88 PHA03212 serine/threonine kina 98.4 7.4E-08 1.6E-12 68.4 1.1 31 52-82 351-381 (391)
89 cd06639 STKc_myosinIIIB Cataly 98.4 3.9E-07 8.4E-12 61.1 4.4 50 32-81 223-291 (291)
90 cd07851 STKc_p38 Catalytic dom 98.4 2.7E-07 5.9E-12 63.8 3.8 31 52-82 273-303 (343)
91 PHA03207 serine/threonine kina 98.4 6E-08 1.3E-12 68.5 0.5 31 52-82 350-380 (392)
92 cd08216 PK_STRAD Pseudokinase 98.4 3.7E-07 7.9E-12 61.9 4.3 31 52-82 270-300 (314)
93 PLN00034 mitogen-activated pro 98.4 2.3E-07 5E-12 64.4 3.3 51 32-82 263-333 (353)
94 PHA03390 pk1 serine/threonine- 98.4 9.6E-08 2.1E-12 63.8 1.4 51 31-81 195-266 (267)
95 cd07850 STKc_JNK Catalytic dom 98.4 1.2E-07 2.6E-12 65.8 1.8 29 53-81 287-315 (353)
96 cd06651 STKc_MEKK3 Catalytic d 98.4 2E-07 4.4E-12 61.8 2.9 50 31-81 198-265 (266)
97 cd08215 STKc_Nek Catalytic dom 98.4 2E-07 4.4E-12 60.6 2.8 49 32-80 193-258 (258)
98 KOG0603|consensus 98.4 1.1E-07 2.5E-12 71.0 1.8 50 31-80 502-566 (612)
99 cd08217 STKc_Nek2 Catalytic do 98.4 4.8E-07 1E-11 59.2 4.4 49 32-80 200-265 (265)
100 cd07847 STKc_CDKL1_4 Catalytic 98.4 2.9E-07 6.2E-12 61.2 3.3 28 53-80 259-286 (286)
101 cd05616 STKc_cPKC_beta Catalyt 98.4 2.2E-07 4.9E-12 63.7 2.8 54 29-82 188-262 (323)
102 cd05574 STKc_phototropin_like 98.4 1.2E-07 2.5E-12 64.5 1.4 51 32-82 222-294 (316)
103 cd05614 STKc_MSK2_N N-terminal 98.4 1.8E-07 3.8E-12 64.2 2.2 53 30-82 195-272 (332)
104 cd07866 STKc_BUR1 Catalytic do 98.4 5.1E-07 1.1E-11 60.7 4.4 28 53-80 284-311 (311)
105 cd07838 STKc_CDK4_6_like Catal 98.4 3.2E-07 7E-12 60.9 3.4 29 52-80 259-287 (287)
106 cd07865 STKc_CDK9 Catalytic do 98.4 5.2E-07 1.1E-11 60.6 4.4 28 53-80 283-310 (310)
107 cd06605 PKc_MAPKK Catalytic do 98.4 5.8E-07 1.3E-11 59.2 4.5 32 52-83 232-263 (265)
108 cd06630 STKc_MEKK1 Catalytic d 98.4 1.7E-07 3.8E-12 61.8 2.0 50 32-81 198-268 (268)
109 PTZ00024 cyclin-dependent prot 98.4 4.6E-07 1E-11 62.1 4.1 31 53-83 289-319 (335)
110 cd07832 STKc_CCRK Catalytic do 98.4 6E-07 1.3E-11 59.7 4.5 30 52-81 257-286 (286)
111 cd06615 PKc_MEK Catalytic doma 98.4 2.1E-07 4.5E-12 63.4 2.3 31 52-82 262-292 (308)
112 cd07839 STKc_CDK5 Catalytic do 98.4 2.3E-07 5.1E-12 61.8 2.5 29 52-80 256-284 (284)
113 cd08226 PK_STRAD_beta Pseudoki 98.4 4E-07 8.6E-12 62.5 3.6 31 52-82 283-313 (328)
114 cd08220 STKc_Nek8 Catalytic do 98.4 3E-07 6.4E-12 60.2 2.8 49 32-80 191-256 (256)
115 cd06611 STKc_SLK_like Catalyti 98.4 5.5E-07 1.2E-11 60.0 4.1 51 32-82 198-267 (280)
116 cd06648 STKc_PAK_II Catalytic 98.4 2.4E-07 5.3E-12 62.3 2.5 51 32-82 205-274 (285)
117 cd05607 STKc_GRK7 Catalytic do 98.4 1.4E-07 3E-12 63.3 1.3 52 31-82 183-259 (277)
118 cd07835 STKc_CDK1_like Catalyt 98.4 6E-07 1.3E-11 59.8 4.3 29 52-80 255-283 (283)
119 cd06655 STKc_PAK2 Catalytic do 98.4 2.4E-07 5.3E-12 62.8 2.4 51 32-82 205-274 (296)
120 cd08222 STKc_Nek11 Catalytic d 98.4 2.5E-07 5.3E-12 61.0 2.4 49 32-80 195-260 (260)
121 cd05118 STKc_CMGC Catalytic do 98.4 6.8E-07 1.5E-11 59.2 4.4 29 52-80 255-283 (283)
122 KOG4717|consensus 98.4 3.7E-07 8.1E-12 68.2 3.4 78 5-82 181-275 (864)
123 cd08529 STKc_FA2-like Catalyti 98.3 3.5E-07 7.7E-12 59.8 3.0 49 32-80 191-256 (256)
124 cd05618 STKc_aPKC_iota Catalyt 98.3 4.7E-07 1E-11 62.5 3.7 54 29-82 183-267 (329)
125 cd05599 STKc_NDR_like Catalyti 98.3 4.9E-07 1.1E-11 62.7 3.8 78 4-82 201-301 (364)
126 cd07841 STKc_CDK7 Catalytic do 98.3 6.4E-07 1.4E-11 60.2 4.1 32 52-83 257-288 (298)
127 cd06640 STKc_MST4 Catalytic do 98.3 2E-07 4.3E-12 62.2 1.6 51 32-82 191-258 (277)
128 cd05588 STKc_aPKC Catalytic do 98.3 4.3E-07 9.4E-12 62.6 3.4 54 29-82 183-267 (329)
129 cd05580 STKc_PKA Catalytic dom 98.3 4.1E-07 8.9E-12 61.2 3.1 52 31-82 187-259 (290)
130 cd06658 STKc_PAK5 Catalytic do 98.3 1.9E-07 4.1E-12 63.2 1.5 51 32-82 208-277 (292)
131 cd05572 STKc_cGK_PKG Catalytic 98.3 3.9E-07 8.5E-12 60.1 2.9 52 31-82 181-257 (262)
132 cd06620 PKc_MAPKK_Byr1_like Ca 98.3 2.6E-07 5.7E-12 61.9 2.1 31 52-82 241-271 (284)
133 cd05592 STKc_nPKC_theta_delta 98.3 3.2E-07 6.9E-12 62.9 2.4 52 31-82 185-253 (316)
134 cd06622 PKc_MAPKK_PBS2_like Ca 98.3 7.6E-07 1.7E-11 59.5 4.2 51 32-82 197-267 (286)
135 cd06643 STKc_SLK Catalytic dom 98.3 7.9E-07 1.7E-11 59.4 4.3 51 32-82 198-267 (282)
136 cd05122 PKc_STE Catalytic doma 98.3 2.3E-07 5E-12 59.9 1.7 48 32-79 187-253 (253)
137 cd05596 STKc_ROCK Catalytic do 98.3 7.3E-07 1.6E-11 62.6 4.2 52 31-82 236-309 (370)
138 cd07855 STKc_ERK5 Catalytic do 98.3 3E-07 6.4E-12 63.2 2.2 31 52-82 269-299 (334)
139 cd07849 STKc_ERK1_2_like Catal 98.3 5.5E-07 1.2E-11 62.0 3.5 30 53-82 268-297 (336)
140 KOG0616|consensus 98.3 1.5E-07 3.3E-12 65.9 0.6 52 31-82 230-302 (355)
141 cd06654 STKc_PAK1 Catalytic do 98.3 3.2E-07 6.9E-12 62.1 2.2 51 32-82 206-275 (296)
142 cd05610 STKc_MASTL Catalytic d 98.3 2.1E-07 4.6E-12 70.3 1.3 78 5-82 543-639 (669)
143 KOG0582|consensus 98.3 6.4E-07 1.4E-11 65.4 3.7 58 25-82 234-298 (516)
144 cd07846 STKc_CDKL2_3 Catalytic 98.3 7.8E-07 1.7E-11 59.2 3.8 28 53-80 259-286 (286)
145 cd07879 STKc_p38delta_MAPK13 C 98.3 9.7E-07 2.1E-11 61.0 4.3 30 53-82 273-302 (342)
146 cd07854 STKc_MAPK4_6 Catalytic 98.3 1.1E-06 2.3E-11 60.8 4.4 30 53-82 276-305 (342)
147 cd05604 STKc_SGK3 Catalytic do 98.3 4.2E-07 9E-12 62.4 2.4 54 29-82 183-256 (325)
148 cd06619 PKc_MKK5 Catalytic dom 98.3 3.1E-07 6.8E-12 61.4 1.6 31 52-82 228-258 (279)
149 cd06626 STKc_MEKK4 Catalytic d 98.3 6.6E-07 1.4E-11 58.8 3.1 50 31-80 195-264 (264)
150 cd06616 PKc_MKK4 Catalytic dom 98.3 9.6E-07 2.1E-11 59.0 4.0 51 32-82 200-272 (288)
151 cd06657 STKc_PAK4 Catalytic do 98.3 4.5E-07 9.7E-12 61.5 2.4 51 32-82 206-275 (292)
152 cd06629 STKc_MAPKKK_Bck1_like 98.3 1.3E-06 2.8E-11 57.9 4.5 49 32-80 202-272 (272)
153 cd07834 STKc_MAPK Catalytic do 98.3 3.9E-07 8.4E-12 62.2 2.0 30 53-82 265-294 (330)
154 cd05123 STKc_AGC Catalytic dom 98.3 4.8E-07 1E-11 59.0 2.3 49 32-80 183-250 (250)
155 cd07829 STKc_CDK_like Catalyti 98.3 1.4E-06 3E-11 57.7 4.6 29 52-80 254-282 (282)
156 cd07870 STKc_PFTAIRE2 Catalyti 98.3 1.6E-06 3.5E-11 58.2 4.9 29 52-80 263-291 (291)
157 cd05626 STKc_LATS2 Catalytic d 98.3 9.3E-07 2E-11 62.1 3.9 79 4-82 210-310 (381)
158 cd07843 STKc_CDC2L1 Catalytic 98.3 9E-07 1.9E-11 59.4 3.6 28 53-80 266-293 (293)
159 cd07833 STKc_CDKL Catalytic do 98.3 5.3E-07 1.2E-11 60.0 2.5 29 52-80 260-288 (288)
160 cd07842 STKc_CDK8_like Catalyt 98.3 6.2E-07 1.3E-11 60.5 2.8 28 53-80 289-316 (316)
161 cd05629 STKc_NDR_like_fungal C 98.3 8.9E-07 1.9E-11 61.9 3.6 78 4-82 210-310 (377)
162 cd06633 STKc_TAO3 Catalytic do 98.3 1.4E-06 3E-11 59.5 4.5 51 32-82 210-278 (313)
163 cd05598 STKc_LATS Catalytic do 98.3 8.1E-07 1.7E-11 62.1 3.4 78 4-82 206-306 (376)
164 cd05577 STKc_GRK Catalytic dom 98.3 3E-07 6.4E-12 61.4 1.1 52 31-82 183-259 (277)
165 cd07836 STKc_Pho85 Catalytic d 98.3 9E-07 1.9E-11 58.9 3.4 28 53-80 257-284 (284)
166 cd07858 STKc_TEY_MAPK_plant Ca 98.3 5.1E-07 1.1E-11 62.2 2.3 30 53-82 267-296 (337)
167 cd08530 STKc_CNK2-like Catalyt 98.3 8.8E-07 1.9E-11 57.8 3.2 49 32-80 191-256 (256)
168 cd05579 STKc_MAST_like Catalyt 98.3 1.1E-06 2.4E-11 57.4 3.7 51 32-82 191-262 (265)
169 cd06644 STKc_STK10_LOK Catalyt 98.3 1.8E-06 3.8E-11 58.1 4.7 51 32-82 205-274 (292)
170 cd05625 STKc_LATS1 Catalytic d 98.3 1.1E-06 2.3E-11 61.6 3.8 78 4-82 210-310 (382)
171 PTZ00283 serine/threonine prot 98.3 3.8E-07 8.2E-12 66.8 1.5 51 31-81 234-301 (496)
172 cd06917 STKc_NAK1_like Catalyt 98.2 1.1E-06 2.4E-11 58.3 3.7 51 32-82 192-260 (277)
173 cd07844 STKc_PCTAIRE_like Cata 98.2 7.6E-07 1.6E-11 59.6 2.8 29 52-80 263-291 (291)
174 PHA03209 serine/threonine kina 98.2 7.8E-07 1.7E-11 62.0 2.9 30 53-82 327-356 (357)
175 cd06606 STKc_MAPKKK Catalytic 98.2 7.1E-07 1.5E-11 57.9 2.4 49 32-80 193-260 (260)
176 cd06624 STKc_ASK Catalytic dom 98.2 1.4E-06 2.9E-11 57.8 3.8 49 32-80 201-268 (268)
177 cd06642 STKc_STK25-YSK1 Cataly 98.2 3.2E-07 6.9E-12 61.2 0.7 51 32-82 191-258 (277)
178 cd05603 STKc_SGK2 Catalytic do 98.2 1E-06 2.2E-11 60.3 3.2 54 29-82 183-256 (321)
179 cd05609 STKc_MAST Catalytic do 98.2 9E-07 1.9E-11 60.0 2.9 52 31-82 205-278 (305)
180 cd05632 STKc_GRK5 Catalytic do 98.2 6.6E-07 1.4E-11 60.2 2.2 52 31-82 190-266 (285)
181 cd06632 STKc_MEKK1_plant Catal 98.2 1.1E-06 2.3E-11 57.5 3.1 49 32-80 192-258 (258)
182 cd06621 PKc_MAPKK_Pek1_like Ca 98.2 2.1E-06 4.5E-11 57.7 4.5 31 52-82 241-271 (287)
183 cd05581 STKc_PDK1 Catalytic do 98.2 1.7E-06 3.7E-11 57.2 4.0 49 32-80 212-280 (280)
184 cd05615 STKc_cPKC_alpha Cataly 98.2 9.4E-07 2E-11 60.7 2.8 52 31-82 190-262 (323)
185 cd06617 PKc_MKK3_6 Catalytic d 98.2 2.1E-06 4.6E-11 57.1 4.4 51 32-82 197-266 (283)
186 cd07830 STKc_MAK_like Catalyti 98.2 2.1E-06 4.7E-11 57.0 4.4 29 52-80 255-283 (283)
187 cd06638 STKc_myosinIIIA Cataly 98.2 2.3E-06 4.9E-11 57.1 4.4 49 32-80 219-286 (286)
188 cd06656 STKc_PAK3 Catalytic do 98.2 1.1E-06 2.3E-11 59.6 2.9 51 32-82 205-274 (297)
189 cd05627 STKc_NDR2 Catalytic do 98.2 1.5E-06 3.2E-11 60.5 3.5 77 5-82 199-298 (360)
190 cd06613 STKc_MAP4K3_like Catal 98.2 1.2E-06 2.6E-11 57.5 2.9 48 32-79 194-262 (262)
191 cd05633 STKc_GRK3 Catalytic do 98.2 9.6E-07 2.1E-11 59.3 2.5 51 32-82 186-260 (279)
192 KOG0201|consensus 98.2 5.8E-07 1.3E-11 65.3 1.4 34 49-82 235-268 (467)
193 cd06607 STKc_TAO Catalytic dom 98.2 2.7E-06 5.9E-11 57.7 4.6 51 32-82 204-272 (307)
194 cd05602 STKc_SGK1 Catalytic do 98.2 1.1E-06 2.5E-11 60.2 2.7 54 29-82 183-256 (325)
195 smart00750 KIND kinase non-cat 98.2 5E-07 1.1E-11 56.6 0.7 30 52-81 140-169 (176)
196 cd06627 STKc_Cdc7_like Catalyt 98.2 2.8E-06 6.2E-11 55.3 4.3 49 32-80 189-254 (254)
197 cd05578 STKc_Yank1 Catalytic d 98.2 2.1E-06 4.6E-11 56.5 3.7 49 32-80 189-258 (258)
198 PTZ00267 NIMA-related protein 98.2 6.5E-07 1.4E-11 65.0 1.3 51 31-81 260-327 (478)
199 cd06659 STKc_PAK6 Catalytic do 98.2 9.9E-07 2.1E-11 59.8 2.1 51 32-82 207-276 (297)
200 PLN03225 Serine/threonine-prot 98.2 3.7E-06 7.9E-11 62.8 5.2 29 54-82 427-455 (566)
201 KOG0667|consensus 98.2 2.2E-06 4.8E-11 64.2 4.0 30 53-82 478-507 (586)
202 PLN00009 cyclin-dependent kina 98.2 1E-06 2.2E-11 59.2 2.1 30 53-82 260-289 (294)
203 cd07877 STKc_p38alpha_MAPK14 C 98.2 2E-06 4.4E-11 59.6 3.6 30 53-82 276-305 (345)
204 KOG0579|consensus 98.2 1.8E-06 3.9E-11 66.0 3.6 43 39-81 251-293 (1187)
205 cd06618 PKc_MKK7 Catalytic dom 98.2 3.3E-06 7.2E-11 56.9 4.6 51 32-82 208-278 (296)
206 cd06614 STKc_PAK Catalytic dom 98.2 1.2E-06 2.7E-11 58.6 2.4 51 32-82 206-275 (286)
207 KOG1027|consensus 98.2 1.7E-06 3.6E-11 66.8 3.3 77 4-80 676-770 (903)
208 cd07840 STKc_CDK9_like Catalyt 98.1 2.5E-06 5.4E-11 56.5 3.6 29 52-80 259-287 (287)
209 cd06634 STKc_TAO2 Catalytic do 98.1 3.9E-06 8.5E-11 57.1 4.7 51 32-82 204-272 (308)
210 cd06645 STKc_MAP4K3 Catalytic 98.1 3.2E-06 6.9E-11 55.9 4.0 28 52-79 240-267 (267)
211 cd06641 STKc_MST3 Catalytic do 98.1 2.9E-06 6.3E-11 56.6 3.8 51 32-82 191-258 (277)
212 cd05628 STKc_NDR1 Catalytic do 98.1 2.1E-06 4.5E-11 59.9 3.1 77 5-82 199-298 (363)
213 cd06647 STKc_PAK_I Catalytic d 98.1 1E-06 2.2E-11 59.6 1.4 51 32-82 205-274 (293)
214 cd07864 STKc_CDK12 Catalytic d 98.1 4.4E-06 9.5E-11 56.1 4.5 29 52-80 274-302 (302)
215 cd05617 STKc_aPKC_zeta Catalyt 98.1 2.5E-06 5.5E-11 58.7 3.2 52 31-82 185-265 (327)
216 cd08221 STKc_Nek9 Catalytic do 98.1 2.8E-06 6E-11 55.8 3.1 49 32-80 191-256 (256)
217 cd06652 STKc_MEKK2 Catalytic d 98.1 3E-06 6.5E-11 56.0 3.2 49 32-81 199-265 (265)
218 cd06623 PKc_MAPKK_plant_like C 98.1 4.1E-06 9E-11 54.9 3.8 51 32-82 190-261 (264)
219 KOG0597|consensus 98.1 1.8E-06 3.9E-11 65.0 2.1 76 8-83 166-257 (808)
220 cd07852 STKc_MAPK15 Catalytic 98.1 3.6E-06 7.7E-11 57.9 3.4 30 53-82 271-300 (337)
221 cd07880 STKc_p38gamma_MAPK12 C 98.1 5.2E-06 1.1E-10 57.5 4.0 30 53-82 274-303 (343)
222 cd05606 STKc_beta_ARK Catalyti 98.1 5.7E-06 1.2E-10 55.5 4.0 52 31-82 185-260 (278)
223 cd06646 STKc_MAP4K5 Catalytic 98.1 4.5E-06 9.8E-11 55.1 3.4 48 32-79 199-267 (267)
224 cd07856 STKc_Sty1_Hog1 Catalyt 98.0 7.6E-06 1.6E-10 56.4 4.6 31 52-82 263-293 (328)
225 cd05621 STKc_ROCK2 Catalytic d 98.0 4.8E-06 1E-10 58.6 3.5 53 30-82 235-309 (370)
226 cd08219 STKc_Nek3 Catalytic do 98.0 5.9E-06 1.3E-10 54.3 3.3 48 31-78 189-253 (255)
227 PHA03211 serine/threonine kina 98.0 4.6E-06 1E-10 60.8 3.0 31 52-82 430-460 (461)
228 cd07857 STKc_MPK1 Catalytic do 98.0 9.1E-06 2E-10 55.8 4.3 30 52-81 267-296 (332)
229 cd06635 STKc_TAO1 Catalytic do 98.0 8.9E-06 1.9E-10 55.5 4.1 50 32-81 214-281 (317)
230 smart00220 S_TKc Serine/Threon 98.0 1.3E-05 2.8E-10 51.3 4.5 49 32-80 176-244 (244)
231 cd05576 STKc_RPK118_like Catal 98.0 3E-06 6.4E-11 55.6 1.2 49 32-80 172-237 (237)
232 KOG0607|consensus 98.0 7E-06 1.5E-10 58.5 3.1 30 53-82 337-366 (463)
233 cd05583 STKc_MSK_N N-terminal 97.9 8.3E-06 1.8E-10 54.6 3.1 51 32-82 198-271 (288)
234 KOG0593|consensus 97.9 1.6E-05 3.5E-10 56.2 4.0 29 53-81 260-288 (396)
235 cd06653 STKc_MEKK3_like_1 Cata 97.9 1.3E-05 2.7E-10 53.1 3.2 48 32-80 199-264 (264)
236 PHA02988 hypothetical protein; 97.9 1.9E-05 4.1E-10 53.4 4.0 46 31-76 211-274 (283)
237 KOG0690|consensus 97.9 1.2E-05 2.5E-10 57.7 3.0 53 30-82 356-429 (516)
238 KOG0671|consensus 97.9 1.4E-05 3E-10 57.5 3.3 32 52-83 381-412 (415)
239 KOG0574|consensus 97.9 8.5E-06 1.8E-10 57.9 2.3 60 23-82 229-288 (502)
240 PLN00181 protein SPA1-RELATED; 97.9 1.3E-05 2.9E-10 61.4 3.5 75 8-82 181-270 (793)
241 cd05622 STKc_ROCK1 Catalytic d 97.9 1.6E-05 3.5E-10 55.9 3.7 53 30-82 235-309 (371)
242 cd05597 STKc_DMPK_like Catalyt 97.8 3.4E-05 7.3E-10 53.2 4.7 52 31-82 197-271 (331)
243 KOG1167|consensus 97.8 1.3E-05 2.9E-10 57.8 2.6 31 52-82 356-386 (418)
244 cd05623 STKc_MRCK_alpha Cataly 97.8 3.5E-05 7.6E-10 53.1 4.4 52 31-82 197-271 (332)
245 KOG0665|consensus 97.8 2.1E-05 4.5E-10 55.7 3.1 30 52-81 285-314 (369)
246 KOG4645|consensus 97.7 3.9E-05 8.4E-10 61.9 4.4 64 16-82 1428-1499(1509)
247 PHA03210 serine/threonine kina 97.7 2.3E-05 5E-10 57.4 2.8 30 53-82 430-459 (501)
248 cd05049 PTKc_Trk Catalytic dom 97.7 2.7E-05 5.8E-10 51.7 2.8 45 32-76 214-276 (280)
249 KOG0661|consensus 97.7 3.4E-05 7.3E-10 56.9 3.5 31 52-82 266-296 (538)
250 cd05061 PTKc_InsR Catalytic do 97.7 2E-05 4.3E-10 52.9 1.8 30 53-82 250-285 (288)
251 PTZ00266 NIMA-related protein 97.7 3.1E-05 6.8E-10 61.3 3.0 50 32-81 233-299 (1021)
252 cd05613 STKc_MSK1_N N-terminal 97.7 3.3E-05 7.1E-10 51.8 2.7 51 32-82 198-273 (290)
253 cd05070 PTKc_Fyn_Yrk Catalytic 97.7 3E-05 6.4E-10 51.1 2.3 45 32-76 193-255 (260)
254 KOG0983|consensus 97.7 8.3E-05 1.8E-09 52.3 4.5 54 30-83 282-355 (391)
255 KOG0586|consensus 97.6 2.3E-05 5E-10 58.8 1.7 56 27-82 240-311 (596)
256 cd05072 PTKc_Lyn Catalytic dom 97.6 4.8E-05 1E-09 50.1 3.1 46 31-76 193-256 (261)
257 cd05035 PTKc_Axl_like Catalyti 97.6 4.2E-05 9E-10 50.4 2.7 46 32-77 205-268 (273)
258 cd00192 PTKc Catalytic domain 97.6 3.2E-05 7E-10 50.3 2.2 46 32-77 197-260 (262)
259 cd05094 PTKc_TrkC Catalytic do 97.6 4.3E-05 9.2E-10 51.4 2.7 45 32-76 215-277 (291)
260 cd05624 STKc_MRCK_beta Catalyt 97.6 6.5E-05 1.4E-09 51.8 3.2 53 30-82 196-271 (331)
261 KOG0612|consensus 97.6 9.2E-05 2E-09 59.2 4.3 51 31-82 270-343 (1317)
262 cd05114 PTKc_Tec_Rlk Catalytic 97.6 4.6E-05 9.9E-10 50.1 2.3 45 32-76 191-253 (256)
263 cd05048 PTKc_Ror Catalytic Dom 97.6 3.4E-05 7.4E-10 51.3 1.7 46 32-77 216-279 (283)
264 cd05067 PTKc_Lck_Blk Catalytic 97.6 5.4E-05 1.2E-09 49.9 2.6 45 32-76 193-255 (260)
265 KOG0587|consensus 97.5 0.00011 2.4E-09 57.4 4.2 60 24-83 229-288 (953)
266 cd05036 PTKc_ALK_LTK Catalytic 97.5 0.00011 2.4E-09 48.9 3.8 46 32-77 211-274 (277)
267 cd05092 PTKc_TrkA Catalytic do 97.5 5.1E-05 1.1E-09 50.8 2.0 45 32-76 214-276 (280)
268 KOG0658|consensus 97.5 0.0001 2.2E-09 52.6 3.5 30 53-82 282-311 (364)
269 cd05090 PTKc_Ror1 Catalytic do 97.5 7.1E-05 1.5E-09 50.0 2.6 46 32-77 216-279 (283)
270 KOG0611|consensus 97.5 9.2E-05 2E-09 54.5 3.3 77 5-81 215-307 (668)
271 KOG0663|consensus 97.5 0.00014 3E-09 52.1 4.0 31 52-82 336-366 (419)
272 cd05053 PTKc_FGFR Catalytic do 97.5 0.00011 2.4E-09 49.2 3.4 47 31-77 223-287 (293)
273 cd05052 PTKc_Abl Catalytic dom 97.5 0.00017 3.7E-09 47.6 4.1 45 32-76 195-257 (263)
274 KOG0576|consensus 97.5 7.2E-05 1.6E-09 57.2 2.5 59 24-82 216-276 (829)
275 cd05089 PTKc_Tie1 Catalytic do 97.5 9.9E-05 2.1E-09 49.8 2.8 45 32-76 208-270 (297)
276 cd05073 PTKc_Hck Catalytic dom 97.5 0.00014 3E-09 48.0 3.5 45 32-76 193-255 (260)
277 cd05044 PTKc_c-ros Catalytic d 97.5 9E-05 1.9E-09 48.9 2.5 45 32-76 203-265 (269)
278 cd05093 PTKc_TrkB Catalytic do 97.5 7E-05 1.5E-09 50.3 2.0 45 32-76 212-274 (288)
279 cd05075 PTKc_Axl Catalytic dom 97.4 0.00016 3.5E-09 47.7 3.6 46 32-77 204-267 (272)
280 cd05116 PTKc_Syk Catalytic dom 97.4 0.0002 4.4E-09 47.1 3.9 45 32-76 188-250 (257)
281 cd05069 PTKc_Yes Catalytic dom 97.4 0.00024 5.2E-09 46.9 4.2 45 32-76 193-255 (260)
282 cd05041 PTKc_Fes_like Catalyti 97.4 0.0001 2.2E-09 48.2 2.3 45 32-76 185-247 (251)
283 cd08528 STKc_Nek10 Catalytic d 97.4 9.4E-05 2E-09 48.9 2.0 46 32-77 203-266 (269)
284 PLN03224 probable serine/threo 97.4 0.00035 7.7E-09 51.9 5.2 30 53-82 473-505 (507)
285 cd05112 PTKc_Itk Catalytic dom 97.4 0.00023 4.9E-09 46.6 3.8 46 32-77 191-254 (256)
286 cd05113 PTKc_Btk_Bmx Catalytic 97.4 0.00026 5.6E-09 46.8 4.0 46 32-77 191-254 (256)
287 KOG0669|consensus 97.4 0.00018 4E-09 50.1 3.3 30 53-82 291-320 (376)
288 cd05043 PTK_Ryk Pseudokinase d 97.4 0.0001 2.2E-09 49.1 1.9 45 32-76 209-271 (280)
289 cd05047 PTKc_Tie Catalytic dom 97.4 0.00012 2.6E-09 48.6 2.2 45 32-76 201-263 (270)
290 cd05060 PTKc_Syk_like Catalyti 97.4 0.00026 5.7E-09 46.5 3.9 45 32-76 188-250 (257)
291 cd05033 PTKc_EphR Catalytic do 97.4 0.00015 3.2E-09 47.9 2.6 26 52-77 236-261 (266)
292 KOG0666|consensus 97.4 0.00016 3.4E-09 51.6 2.7 31 53-83 313-343 (438)
293 cd05148 PTKc_Srm_Brk Catalytic 97.3 0.0003 6.5E-09 46.2 3.9 45 32-76 194-256 (261)
294 cd05088 PTKc_Tie2 Catalytic do 97.3 0.00021 4.6E-09 48.5 3.2 47 31-77 212-276 (303)
295 cd05084 PTKc_Fes Catalytic dom 97.3 0.00014 3.1E-09 47.6 2.3 24 53-76 225-248 (252)
296 cd05062 PTKc_IGF-1R Catalytic 97.3 7.5E-05 1.6E-09 49.7 0.9 46 32-77 211-274 (277)
297 KOG0584|consensus 97.3 0.00026 5.5E-09 53.5 3.7 30 53-83 273-302 (632)
298 KOG0986|consensus 97.3 8.7E-05 1.9E-09 54.9 1.1 80 3-82 347-451 (591)
299 cd05071 PTKc_Src Catalytic dom 97.3 0.00017 3.7E-09 47.8 2.3 45 32-76 193-255 (262)
300 cd05068 PTKc_Frk_like Catalyti 97.3 0.00024 5.1E-09 46.8 2.9 45 32-76 194-256 (261)
301 smart00219 TyrKc Tyrosine kina 97.3 0.00016 3.4E-09 47.1 2.0 45 32-76 194-256 (258)
302 cd08228 STKc_Nek6 Catalytic do 97.3 0.00015 3.2E-09 47.8 1.8 45 32-76 196-260 (267)
303 KOG4236|consensus 97.3 6.6E-05 1.4E-09 56.7 0.2 74 10-83 734-825 (888)
304 KOG0589|consensus 97.3 0.00031 6.7E-09 51.3 3.6 52 30-81 194-262 (426)
305 cd05055 PTKc_PDGFR Catalytic d 97.3 0.00013 2.8E-09 49.6 1.5 45 32-76 233-296 (302)
306 cd05032 PTKc_InsR_like Catalyt 97.3 0.00025 5.3E-09 47.0 2.8 45 32-76 211-273 (277)
307 KOG0614|consensus 97.3 0.00011 2.4E-09 55.1 1.3 76 7-82 584-682 (732)
308 cd05040 PTKc_Ack_like Catalyti 97.3 0.00022 4.8E-09 46.7 2.6 45 32-76 190-253 (257)
309 cd08229 STKc_Nek7 Catalytic do 97.3 0.00016 3.6E-09 47.6 1.9 45 32-76 196-260 (267)
310 cd05078 PTK_Jak2_Jak3_rpt1 Pse 97.3 0.00042 9.1E-09 45.7 3.9 45 32-76 195-255 (258)
311 cd05039 PTKc_Csk_like Catalyti 97.3 0.00044 9.6E-09 45.3 3.9 45 32-76 189-251 (256)
312 KOG0659|consensus 97.3 0.0002 4.4E-09 49.8 2.3 30 53-82 257-286 (318)
313 cd05102 PTKc_VEGFR3 Catalytic 97.3 0.00012 2.6E-09 50.2 1.2 45 32-76 266-329 (338)
314 cd05091 PTKc_Ror2 Catalytic do 97.2 0.0002 4.3E-09 47.7 2.2 45 32-76 216-278 (283)
315 cd05045 PTKc_RET Catalytic dom 97.2 0.00047 1E-08 46.2 4.0 45 32-76 219-281 (290)
316 KOG2345|consensus 97.2 0.00017 3.6E-09 49.9 1.8 57 21-77 220-296 (302)
317 cd05082 PTKc_Csk Catalytic dom 97.2 0.00026 5.7E-09 46.5 2.6 45 32-76 189-251 (256)
318 KOG0696|consensus 97.2 0.00036 7.8E-09 51.5 3.4 51 31-81 539-610 (683)
319 cd05056 PTKc_FAK Catalytic dom 97.2 0.00026 5.7E-09 46.8 2.6 45 32-76 198-260 (270)
320 cd05077 PTK_Jak1_rpt1 Pseudoki 97.2 0.00047 1E-08 45.8 3.7 46 32-77 199-260 (262)
321 cd05099 PTKc_FGFR4 Catalytic d 97.2 0.00029 6.2E-09 48.0 2.6 45 32-76 226-288 (314)
322 cd05100 PTKc_FGFR3 Catalytic d 97.2 0.00028 6.1E-09 48.5 2.6 46 32-77 226-289 (334)
323 cd05034 PTKc_Src_like Catalyti 97.2 0.0002 4.3E-09 47.0 1.7 45 32-76 194-256 (261)
324 cd05098 PTKc_FGFR1 Catalytic d 97.2 0.00021 4.6E-09 48.4 1.9 46 32-77 232-295 (307)
325 cd05059 PTKc_Tec_like Catalyti 97.2 0.00059 1.3E-08 44.9 3.9 46 32-77 191-254 (256)
326 cd05083 PTKc_Chk Catalytic dom 97.1 0.00037 8E-09 45.7 2.7 45 32-76 187-249 (254)
327 cd08224 STKc_Nek6_Nek7 Catalyt 97.1 0.00018 3.8E-09 47.3 0.9 45 32-76 196-260 (267)
328 KOG0590|consensus 97.1 0.00017 3.7E-09 54.5 1.0 30 53-82 561-590 (601)
329 cd05108 PTKc_EGFR Catalytic do 97.1 0.00032 6.8E-09 47.8 2.1 46 32-77 201-264 (316)
330 cd05054 PTKc_VEGFR Catalytic d 97.1 0.0002 4.4E-09 49.7 1.1 46 32-77 265-329 (337)
331 cd05065 PTKc_EphR_B Catalytic 97.1 0.00055 1.2E-08 45.3 3.1 46 31-76 200-263 (269)
332 KOG0668|consensus 97.1 0.00042 9E-09 47.8 2.5 30 52-81 297-326 (338)
333 cd05058 PTKc_Met_Ron Catalytic 97.1 0.0003 6.5E-09 46.2 1.7 25 52-76 230-254 (262)
334 KOG4279|consensus 97.1 0.0014 3E-08 51.2 5.4 66 15-83 764-838 (1226)
335 cd05050 PTKc_Musk Catalytic do 97.1 0.001 2.2E-08 44.4 4.2 25 52-76 260-284 (288)
336 cd05051 PTKc_DDR Catalytic dom 97.1 0.00074 1.6E-08 45.2 3.5 25 52-76 268-292 (296)
337 cd05106 PTKc_CSF-1R Catalytic 97.0 0.00038 8.2E-09 49.1 2.1 45 32-76 304-367 (374)
338 cd05109 PTKc_HER2 Catalytic do 97.0 0.00029 6.4E-09 46.9 1.5 45 32-76 201-263 (279)
339 cd05085 PTKc_Fer Catalytic dom 97.0 0.0011 2.3E-08 43.3 4.1 45 32-76 184-246 (250)
340 cd05063 PTKc_EphR_A2 Catalytic 97.0 0.0011 2.3E-08 43.8 4.1 45 32-76 200-262 (268)
341 PF07714 Pkinase_Tyr: Protein 97.0 0.00076 1.7E-08 44.8 3.3 45 32-76 195-257 (259)
342 KOG0595|consensus 97.0 0.00031 6.8E-09 51.0 1.4 79 4-82 176-273 (429)
343 cd05064 PTKc_EphR_A10 Catalyti 97.0 0.00044 9.6E-09 45.9 1.7 24 53-76 237-260 (266)
344 cd05046 PTK_CCK4 Pseudokinase 97.0 0.00066 1.4E-08 44.9 2.5 25 53-77 248-272 (275)
345 cd05104 PTKc_Kit Catalytic dom 96.9 0.00049 1.1E-08 48.4 2.0 26 52-77 345-370 (375)
346 cd05101 PTKc_FGFR2 Catalytic d 96.9 0.00072 1.6E-08 45.7 2.6 45 32-76 229-291 (304)
347 cd05097 PTKc_DDR_like Catalyti 96.9 0.00094 2E-08 44.9 3.1 24 53-76 268-291 (295)
348 cd05111 PTK_HER3 Pseudokinase 96.9 0.00071 1.5E-08 45.3 2.5 45 32-76 201-263 (279)
349 KOG0192|consensus 96.9 0.0011 2.4E-08 47.3 3.6 74 3-76 205-298 (362)
350 KOG0600|consensus 96.9 0.002 4.3E-08 48.1 4.9 30 53-82 376-405 (560)
351 cd05066 PTKc_EphR_A Catalytic 96.9 0.00082 1.8E-08 44.5 2.6 45 32-76 199-261 (267)
352 cd05074 PTKc_Tyro3 Catalytic d 96.9 0.0016 3.5E-08 42.9 3.8 45 32-76 205-267 (273)
353 PLN00113 leucine-rich repeat r 96.8 0.0012 2.7E-08 51.3 3.6 71 6-76 842-946 (968)
354 cd05076 PTK_Tyk2_rpt1 Pseudoki 96.8 0.0017 3.6E-08 43.5 3.6 25 53-77 248-272 (274)
355 cd05057 PTKc_EGFR_like Catalyt 96.8 0.0021 4.5E-08 42.8 3.9 45 32-76 201-263 (279)
356 KOG0594|consensus 96.8 0.00079 1.7E-08 47.6 1.9 31 52-82 277-307 (323)
357 cd05038 PTKc_Jak_rpt2 Catalyti 96.8 0.0012 2.6E-08 43.7 2.6 25 52-76 254-278 (284)
358 PHA02882 putative serine/threo 96.7 0.00069 1.5E-08 45.9 1.3 46 31-76 222-291 (294)
359 KOG0662|consensus 96.7 0.0015 3.2E-08 43.8 2.6 31 53-83 259-289 (292)
360 cd05115 PTKc_Zap-70 Catalytic 96.6 0.0012 2.7E-08 43.6 1.9 45 32-76 188-250 (257)
361 cd05095 PTKc_DDR2 Catalytic do 96.6 0.0033 7.2E-08 42.3 4.0 25 52-76 268-292 (296)
362 cd05087 PTKc_Aatyk1_Aatyk3 Cat 96.6 0.0036 7.7E-08 41.4 4.0 23 53-76 243-265 (269)
363 KOG1035|consensus 96.6 0.0029 6.3E-08 51.3 4.0 29 53-81 847-875 (1351)
364 cd05103 PTKc_VEGFR2 Catalytic 96.6 0.0011 2.4E-08 45.9 1.4 26 52-77 310-335 (343)
365 KOG0577|consensus 96.6 0.0029 6.4E-08 48.6 3.7 35 48-82 249-283 (948)
366 cd05105 PTKc_PDGFR_alpha Catal 96.5 0.002 4.4E-08 46.1 2.3 24 53-76 369-392 (400)
367 cd05096 PTKc_DDR1 Catalytic do 96.4 0.002 4.4E-08 43.5 2.1 24 52-75 276-299 (304)
368 cd05080 PTKc_Tyk2_rpt2 Catalyt 96.4 0.0041 9E-08 41.4 3.4 25 52-76 252-276 (283)
369 cd05110 PTKc_HER4 Catalytic do 96.4 0.0051 1.1E-07 41.6 3.9 45 32-76 201-263 (303)
370 cd05079 PTKc_Jak1_rpt2 Catalyt 96.3 0.0017 3.8E-08 43.3 1.2 26 52-77 254-279 (284)
371 cd05037 PTK_Jak_rpt1 Pseudokin 96.2 0.0063 1.4E-07 39.7 3.3 25 52-76 232-256 (259)
372 cd05107 PTKc_PDGFR_beta Cataly 96.2 0.0023 5E-08 45.9 1.3 26 52-77 370-395 (401)
373 KOG1989|consensus 96.1 0.00098 2.1E-08 51.5 -1.0 47 31-77 247-307 (738)
374 KOG0608|consensus 96.0 0.0021 4.5E-08 49.7 0.2 74 8-82 837-933 (1034)
375 KOG4721|consensus 95.9 0.0031 6.6E-08 48.3 1.0 72 6-77 275-364 (904)
376 cd05042 PTKc_Aatyk Catalytic d 95.7 0.018 4E-07 37.9 4.1 23 53-76 243-265 (269)
377 PRK13184 pknD serine/threonine 95.6 0.0042 9.1E-08 49.3 0.7 46 31-76 220-284 (932)
378 cd05086 PTKc_Aatyk2 Catalytic 95.4 0.03 6.5E-07 37.1 4.0 23 53-76 242-264 (268)
379 KOG0591|consensus 94.9 0.0099 2.1E-07 42.1 0.7 45 27-71 213-275 (375)
380 cd00180 PKc Catalytic domain o 94.8 0.032 6.9E-07 34.3 2.8 28 51-78 188-215 (215)
381 KOG0603|consensus 94.8 0.02 4.3E-07 43.6 2.1 77 4-82 155-248 (612)
382 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 94.7 0.026 5.7E-07 37.5 2.3 25 52-76 254-278 (284)
383 KOG1006|consensus 94.7 0.055 1.2E-06 38.2 3.8 33 51-83 301-333 (361)
384 KOG0606|consensus 93.8 0.047 1E-06 44.2 2.4 52 31-82 247-320 (1205)
385 KOG0193|consensus 91.4 0.13 2.9E-06 39.4 1.9 46 31-76 582-648 (678)
386 KOG0606|consensus 89.0 0.28 6E-06 40.0 2.0 72 11-82 1004-1097(1205)
387 KOG1151|consensus 88.3 1.1 2.5E-05 34.0 4.7 52 31-82 673-746 (775)
388 KOG0197|consensus 88.0 1.1 2.4E-05 33.4 4.4 44 32-75 394-455 (468)
389 KOG0695|consensus 86.5 0.16 3.6E-06 37.1 -0.5 51 31-81 440-520 (593)
390 KOG1095|consensus 86.5 1.1 2.3E-05 36.5 3.8 45 32-76 894-956 (1025)
391 KOG0664|consensus 84.1 1.1 2.4E-05 32.1 2.7 30 53-82 319-348 (449)
392 PF14531 Kinase-like: Kinase-l 79.3 0.64 1.4E-05 32.5 0.1 38 31-68 239-288 (288)
393 KOG1033|consensus 78.5 0.96 2.1E-05 34.1 0.8 78 3-80 423-515 (516)
394 KOG1026|consensus 78.3 3.3 7.3E-05 32.8 3.7 23 53-75 734-756 (774)
395 KOG0200|consensus 74.6 6.3 0.00014 30.1 4.3 24 53-76 551-574 (609)
396 KOG1266|consensus 74.0 1.1 2.3E-05 32.8 0.1 28 53-80 307-334 (458)
397 KOG1240|consensus 72.7 1.9 4.2E-05 35.8 1.2 25 53-77 267-291 (1431)
398 KOG4278|consensus 67.3 10 0.00023 30.3 4.0 39 37-75 462-517 (1157)
399 KOG1094|consensus 64.6 7.6 0.00016 30.5 2.8 24 53-76 776-799 (807)
400 KOG1024|consensus 58.8 19 0.00041 27.2 3.9 39 37-75 494-549 (563)
401 KOG4158|consensus 57.2 7.9 0.00017 29.2 1.8 21 53-73 486-506 (598)
402 KOG0194|consensus 56.8 18 0.00039 27.2 3.6 24 53-76 392-415 (474)
403 cd00059 FH Forkhead (FH), also 52.3 20 0.00044 20.2 2.6 30 53-82 6-40 (78)
404 KOG0590|consensus 48.7 4.8 0.00011 30.9 -0.4 30 53-82 262-291 (601)
405 KOG0199|consensus 46.3 36 0.00079 27.6 3.9 23 53-75 344-366 (1039)
406 KOG1025|consensus 45.1 37 0.00079 28.1 3.8 24 53-76 929-952 (1177)
407 KOG1187|consensus 38.7 49 0.0011 23.7 3.4 27 49-75 320-346 (361)
408 KOG0195|consensus 36.8 29 0.00063 25.1 2.0 22 53-74 418-439 (448)
409 PRK13378 protocatechuate 4,5-d 28.7 29 0.00063 21.3 0.8 37 33-69 7-43 (117)
410 KOG4257|consensus 28.5 58 0.0013 26.2 2.5 23 53-75 621-643 (974)
411 COG4536 CorB Putative Mg2+ and 28.5 95 0.0021 23.1 3.5 68 14-81 206-280 (423)
412 KOG1035|consensus 28.1 33 0.00072 29.1 1.3 30 53-82 410-439 (1351)
413 PRK13377 protocatechuate 4,5-d 26.4 32 0.0007 21.4 0.8 37 33-69 7-43 (129)
414 TIGR02792 PCA_ligA protocatech 24.3 36 0.00079 20.9 0.7 35 35-69 3-37 (117)
415 cd07924 PCA_45_Doxase_A The A 23.5 39 0.00085 20.9 0.7 37 33-69 4-40 (121)
416 KOG1023|consensus 23.4 69 0.0015 24.3 2.1 25 52-76 195-219 (484)
417 COG0515 SPS1 Serine/threonine 23.1 89 0.0019 19.7 2.4 29 52-80 250-278 (384)
418 smart00339 FH FORKHEAD. FORKHE 22.0 98 0.0021 17.7 2.2 29 54-82 7-40 (89)
419 cd07921 PCA_45_Doxase_A_like S 20.3 87 0.0019 18.9 1.7 29 38-68 1-29 (106)
No 1
>KOG0670|consensus
Probab=99.60 E-value=2.4e-15 Score=110.55 Aligned_cols=81 Identities=49% Similarity=0.749 Sum_probs=78.2
Q ss_pred ccceeeeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHHHHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 3 LISFKIINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARKVLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 3 ~~~f~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+++|++.|.|++++++...++.+++|+++|-..|.+.+.++++..+.+.++++||.+||.+||.+|.|+.++|.|||+++
T Consensus 672 d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 672 DLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred ccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred C
Q psy17425 83 K 83 (84)
Q Consensus 83 ~ 83 (84)
.
T Consensus 752 k 752 (752)
T KOG0670|consen 752 K 752 (752)
T ss_pred C
Confidence 3
No 2
>KOG0615|consensus
Probab=99.18 E-value=1.1e-11 Score=88.99 Aligned_cols=78 Identities=17% Similarity=0.181 Sum_probs=59.7
Q ss_pred ceeeeeecCCCCCceEEEe---cccCCCchhhhhhcCCCCCChhHHHH---------------------HHHHHHHHHHH
Q psy17425 5 SFKIINFHFPPSQEKIVTM---STIHPTRDLHSELVGNQHLPDDQARK---------------------VLQLKDLLDKI 60 (84)
Q Consensus 5 ~f~~~~~d~~~~~~~~~~~---~~~~p~~~L~~~l~g~~p~~~~~~~~---------------------~~~~~~Ll~~~ 60 (84)
.-.|+.++.+.++++.... .-++-...||.+++|.+||.++.... ..++++||++|
T Consensus 341 TpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~m 420 (475)
T KOG0615|consen 341 TPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWM 420 (475)
T ss_pred CccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHh
Confidence 3457777777777665544 44455557899999999997653322 22399999999
Q ss_pred hccCcCCCCCHHHHhcCccccc
Q psy17425 61 LMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 61 L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
|++||++|+|++|+|+|||++.
T Consensus 421 L~VdP~~R~s~~eaL~hpW~~~ 442 (475)
T KOG0615|consen 421 LVVDPENRPSADEALNHPWFKD 442 (475)
T ss_pred hEeCcccCcCHHHHhcChhhhc
Confidence 9999999999999999999973
No 3
>KOG0575|consensus
Probab=99.13 E-value=4.6e-11 Score=88.45 Aligned_cols=76 Identities=20% Similarity=0.281 Sum_probs=65.9
Q ss_pred eeeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHHHHH----------------HHHHHHHHhccCcCCCCC
Q psy17425 7 KIINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARKVLQ----------------LKDLLDKILMLDTSKRLP 70 (84)
Q Consensus 7 ~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~~~~----------------~~~Ll~~~L~~dp~~R~s 70 (84)
.|..++.++++++..-+..++-...+|.+|+|.+||...+..+++. +++||.++|..||.+|||
T Consensus 183 NYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rps 262 (592)
T KOG0575|consen 183 NYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPSHLSAEAKDLIRKLLRPNPSERPS 262 (592)
T ss_pred cccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccccccCHHHHHHHHHHhcCCcccCCC
Confidence 4556667777778777777888888999999999999988777765 899999999999999999
Q ss_pred HHHHhcCccccc
Q psy17425 71 INQALTHPFILE 82 (84)
Q Consensus 71 ~~~~l~hp~~~~ 82 (84)
+++++.|+||+.
T Consensus 263 l~~vL~h~Ff~~ 274 (592)
T KOG0575|consen 263 LDEVLDHPFFKS 274 (592)
T ss_pred HHHHhcCHhhhC
Confidence 999999999954
No 4
>KOG0033|consensus
Probab=99.12 E-value=3.8e-11 Score=82.36 Aligned_cols=56 Identities=27% Similarity=0.432 Sum_probs=48.5
Q ss_pred CCCchhhhhhcCCCCCChhHHHHHHH--------------------HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 27 HPTRDLHSELVGNQHLPDDQARKVLQ--------------------LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 27 ~p~~~L~~~l~g~~p~~~~~~~~~~~--------------------~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
.-...||.++.|.+||.+++...+++ +++||++||..||.+|+|+.|+|+|||+.+
T Consensus 197 ~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~ 272 (355)
T KOG0033|consen 197 ACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICN 272 (355)
T ss_pred hhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence 33345899999999999977666665 999999999999999999999999999864
No 5
>KOG0588|consensus
Probab=99.10 E-value=7.9e-11 Score=88.51 Aligned_cols=80 Identities=25% Similarity=0.257 Sum_probs=63.9
Q ss_pred cceeeeeecCCCCCceEEEeccc-CCCchhhhhhcCCCCCChhHHHHHHH----------------HHHHHHHHhccCcC
Q psy17425 4 ISFKIINFHFPPSQEKIVTMSTI-HPTRDLHSELVGNQHLPDDQARKVLQ----------------LKDLLDKILMLDTS 66 (84)
Q Consensus 4 ~~f~~~~~d~~~~~~~~~~~~~~-~p~~~L~~~l~g~~p~~~~~~~~~~~----------------~~~Ll~~~L~~dp~ 66 (84)
|+=+|+.++.+.|+..--.-+++ +=..-||.+|+|+.||++++.+.++. +++||.+||.+||.
T Consensus 173 GSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs~Is~eaQdLLr~ml~VDp~ 252 (786)
T KOG0588|consen 173 GSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPSNISSEAQDLLRRMLDVDPS 252 (786)
T ss_pred CCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCCcCCHHHHHHHHHHhccCcc
Confidence 55566777777776544443332 22335899999999999999998775 99999999999999
Q ss_pred CCCCHHHHhcCcccccC
Q psy17425 67 KRLPINQALTHPFILEK 83 (84)
Q Consensus 67 ~R~s~~~~l~hp~~~~~ 83 (84)
+|+|.++++.|||+.++
T Consensus 253 ~RiT~~eI~kHP~l~g~ 269 (786)
T KOG0588|consen 253 TRITTEEILKHPFLSGY 269 (786)
T ss_pred ccccHHHHhhCchhhcC
Confidence 99999999999999764
No 6
>KOG1290|consensus
Probab=98.93 E-value=1e-09 Score=80.47 Aligned_cols=69 Identities=23% Similarity=0.398 Sum_probs=63.6
Q ss_pred eeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHHHHHHHHHHHHHhccCcCCCCCHHHHhcCcccc
Q psy17425 9 INFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARKVLQLKDLLDKILMLDTSKRLPINQALTHPFIL 81 (84)
Q Consensus 9 ~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~ 81 (84)
+.+|.|+.++.++.|..++||. |+..|+.+..|+.++.. ++.+||.-||+.+|.+|+||.++++|||+.
T Consensus 486 ~SRdFFnr~G~LrhI~~LK~Wp-L~~VL~eKY~~s~e~A~---~fsdFL~PmLef~PeKR~tA~~cl~hPwLn 554 (590)
T KOG1290|consen 486 YSRDFFNRRGELRHIRRLKPWP-LYEVLIEKYEWSEEDAQ---QFSDFLSPMLEFDPEKRPTAAQCLKHPWLN 554 (590)
T ss_pred chHhhhccccceecccccCCCc-HHHHHHHHhCCCHHHHH---HHHHHHHHHHhcCccccccHHHHhcCcccc
Confidence 4678899999999999999994 99999999999988766 478999999999999999999999999986
No 7
>KOG0032|consensus
Probab=98.92 E-value=1e-09 Score=78.39 Aligned_cols=80 Identities=21% Similarity=0.182 Sum_probs=66.8
Q ss_pred ccceeeeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHHHHH--------------------HHHHHHHHhc
Q psy17425 3 LISFKIINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARKVLQ--------------------LKDLLDKILM 62 (84)
Q Consensus 3 ~~~f~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~~~~--------------------~~~Ll~~~L~ 62 (84)
.|++-++.++.+.+.+.......++...-+|.+++|.+||.++....... +++||.++|.
T Consensus 199 ~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~ 278 (382)
T KOG0032|consen 199 VGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLE 278 (382)
T ss_pred cCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcc
Confidence 46778888887777777777777777778999999999998766433222 9999999999
Q ss_pred cCcCCCCCHHHHhcCccccc
Q psy17425 63 LDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 63 ~dp~~R~s~~~~l~hp~~~~ 82 (84)
.||.+|+++.++|.|||+++
T Consensus 279 ~dp~~R~ta~~~L~HpWi~~ 298 (382)
T KOG0032|consen 279 FDPRKRLTAAQALQHPWIKS 298 (382)
T ss_pred cCcccCCCHHHHhcCccccC
Confidence 99999999999999999975
No 8
>PTZ00284 protein kinase; Provisional
Probab=98.87 E-value=9e-10 Score=79.30 Aligned_cols=31 Identities=42% Similarity=0.620 Sum_probs=28.8
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCcccccC
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILEK 83 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~~ 83 (84)
+.|||.+||+.||.+|+|+.+++.||||...
T Consensus 414 ~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~ 444 (467)
T PTZ00284 414 LCDLIYGLLHYDRQKRLNARQMTTHPYVLKY 444 (467)
T ss_pred HHHHHHHhCCcChhhCCCHHHHhcCcccccc
Confidence 5699999999999999999999999999763
No 9
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=98.86 E-value=1.4e-09 Score=72.79 Aligned_cols=28 Identities=36% Similarity=0.609 Sum_probs=27.2
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+++||++||..||.+|+|++++++||||
T Consensus 260 ~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 260 LLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred HHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 7899999999999999999999999997
No 10
>KOG0581|consensus
Probab=98.81 E-value=5.2e-09 Score=74.10 Aligned_cols=80 Identities=18% Similarity=0.164 Sum_probs=58.5
Q ss_pred ccceeeeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChh-----HHHHH------------------HHHHHHHHH
Q psy17425 3 LISFKIINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDD-----QARKV------------------LQLKDLLDK 59 (84)
Q Consensus 3 ~~~f~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~-----~~~~~------------------~~~~~Ll~~ 59 (84)
+|..-|+.++-+.|......-.-++-.-.+.++..|..|++.. +.-++ .++++||..
T Consensus 238 vGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~ 317 (364)
T KOG0581|consen 238 VGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSC 317 (364)
T ss_pred cccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHH
Confidence 4666677777677765555544455555677777887777663 22222 239999999
Q ss_pred HhccCcCCCCCHHHHhcCccccc
Q psy17425 60 ILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 60 ~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
||++||.+|+++.+++.|||++.
T Consensus 318 CL~Kdp~~R~s~~qLl~Hpfi~~ 340 (364)
T KOG0581|consen 318 CLRKDPSERPSAKQLLQHPFIKK 340 (364)
T ss_pred HhcCCcccCCCHHHHhcCHHHhh
Confidence 99999999999999999999975
No 11
>KOG0610|consensus
Probab=98.79 E-value=2.4e-09 Score=77.09 Aligned_cols=76 Identities=22% Similarity=0.239 Sum_probs=60.7
Q ss_pred eeeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHHHHH------------------HHHHHHHHhccCcCCC
Q psy17425 7 KIINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARKVLQ------------------LKDLLDKILMLDTSKR 68 (84)
Q Consensus 7 ~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~~~~------------------~~~Ll~~~L~~dp~~R 68 (84)
-|..++.+.|.++---+.-+.-..-||+|+.|+.||.+.+.+.+.. ++|||+++|++||.+|
T Consensus 300 EYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kR 379 (459)
T KOG0610|consen 300 EYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKR 379 (459)
T ss_pred ccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhh
Confidence 3556677777777666554444446899999999998876655442 9999999999999999
Q ss_pred CC----HHHHhcCccccc
Q psy17425 69 LP----INQALTHPFILE 82 (84)
Q Consensus 69 ~s----~~~~l~hp~~~~ 82 (84)
.. +.||-+||||.+
T Consensus 380 lg~~rGA~eIK~HpFF~g 397 (459)
T KOG0610|consen 380 LGSKRGAAEIKRHPFFEG 397 (459)
T ss_pred hccccchHHhhcCccccC
Confidence 98 999999999964
No 12
>KOG0592|consensus
Probab=98.79 E-value=4e-09 Score=77.97 Aligned_cols=52 Identities=31% Similarity=0.436 Sum_probs=46.7
Q ss_pred hhhhhhcCCCCCChhHHHHHHH----------------HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQARKVLQ----------------LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~~~~----------------~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
-||+|+.|.+||.+.+.-.+.+ ++|||+++|++||.+|+|+.+|.+||||.+
T Consensus 276 ilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~ 343 (604)
T KOG0592|consen 276 ILYQMLAGQPPFRAANEYLIFQKIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEG 343 (604)
T ss_pred HHHHHhcCCCCCccccHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCccccc
Confidence 4899999999999987655554 899999999999999999999999999964
No 13
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=98.77 E-value=8.1e-09 Score=70.88 Aligned_cols=77 Identities=14% Similarity=0.156 Sum_probs=53.8
Q ss_pred eeeeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHHHH----------------HHHHHHHHHhccCcCCCC
Q psy17425 6 FKIINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARKVL----------------QLKDLLDKILMLDTSKRL 69 (84)
Q Consensus 6 f~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~~~----------------~~~~Ll~~~L~~dp~~R~ 69 (84)
..+..++.+.+.........++-...+|++++|..||.+.+..... .+.+||++||..||.+|+
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~ 238 (323)
T cd05571 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRL 238 (323)
T ss_pred ccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcC
Confidence 3344454444443333333344444588999999999765433221 389999999999999999
Q ss_pred -----CHHHHhcCccccc
Q psy17425 70 -----PINQALTHPFILE 82 (84)
Q Consensus 70 -----s~~~~l~hp~~~~ 82 (84)
++.+++.||||..
T Consensus 239 ~~~~~~~~~ll~h~~f~~ 256 (323)
T cd05571 239 GGGPEDAKEIMEHRFFAS 256 (323)
T ss_pred CCCCCCHHHHHcCCCcCC
Confidence 8999999999964
No 14
>KOG0198|consensus
Probab=98.73 E-value=1.5e-08 Score=70.94 Aligned_cols=65 Identities=22% Similarity=0.273 Sum_probs=48.4
Q ss_pred CCCceEEEecccCCCchh-------hhhhcCC--CCCChhHHHHHHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 15 PSQEKIVTMSTIHPTRDL-------HSELVGN--QHLPDDQARKVLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 15 ~~~~~~~~~~~~~p~~~L-------~~~l~g~--~p~~~~~~~~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
.||++++++++..||... +....+. ++++.. ...++++||.+|+..||.+|||++++|.|||...
T Consensus 208 lGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~---ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 208 LGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDS---LSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred cCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcc---cCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence 478889999998888762 2222222 223332 3334899999999999999999999999999865
No 15
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=98.69 E-value=7.3e-09 Score=71.33 Aligned_cols=31 Identities=19% Similarity=0.507 Sum_probs=28.9
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
++++||.+||..||++|||+.+++.|||++.
T Consensus 276 ~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~ 306 (331)
T cd06649 276 DFQEFVNKCLIKNPAERADLKMLMNHTFIKR 306 (331)
T ss_pred HHHHHHHHHccCCcccCCCHHHHhcChHHhh
Confidence 4789999999999999999999999999864
No 16
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=98.67 E-value=1.4e-08 Score=70.00 Aligned_cols=54 Identities=24% Similarity=0.378 Sum_probs=43.5
Q ss_pred CchhhhhhcCCCCCChhHHHHHH----------------HHHHHHHHHhccCcCCCCC-----HHHHhcCccccc
Q psy17425 29 TRDLHSELVGNQHLPDDQARKVL----------------QLKDLLDKILMLDTSKRLP-----INQALTHPFILE 82 (84)
Q Consensus 29 ~~~L~~~l~g~~p~~~~~~~~~~----------------~~~~Ll~~~L~~dp~~R~s-----~~~~l~hp~~~~ 82 (84)
...+|++++|..||.+.+..... .+++||++||..||.+|++ +.+++.||||.+
T Consensus 202 G~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~ 276 (329)
T PTZ00263 202 GVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHG 276 (329)
T ss_pred HHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCC
Confidence 34588999999999765433221 2789999999999999997 799999999965
No 17
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=98.67 E-value=3.3e-08 Score=66.64 Aligned_cols=28 Identities=32% Similarity=0.576 Sum_probs=27.1
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+++||++||..||.+|+|+.++++||||
T Consensus 261 ~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 261 GIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred HHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 7899999999999999999999999997
No 18
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.67 E-value=1.5e-08 Score=70.31 Aligned_cols=31 Identities=45% Similarity=0.866 Sum_probs=28.5
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
++++||.+||..||.+|+|+.+++.|||+..
T Consensus 290 ~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 290 QARDLLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred hHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence 3689999999999999999999999999863
No 19
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=98.66 E-value=1.8e-08 Score=68.79 Aligned_cols=55 Identities=27% Similarity=0.350 Sum_probs=43.9
Q ss_pred CCchhhhhhcCCCCCChhHHHHHH----------------HHHHHHHHHhccCcCCCC---CHHHHhcCccccc
Q psy17425 28 PTRDLHSELVGNQHLPDDQARKVL----------------QLKDLLDKILMLDTSKRL---PINQALTHPFILE 82 (84)
Q Consensus 28 p~~~L~~~l~g~~p~~~~~~~~~~----------------~~~~Ll~~~L~~dp~~R~---s~~~~l~hp~~~~ 82 (84)
-...+|++++|..||.+.+..... .+++||.+||..||.+|+ ++.+++.|||+.+
T Consensus 179 lGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~ 252 (312)
T cd05585 179 LGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQ 252 (312)
T ss_pred hhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCC
Confidence 334588899999999765443322 288999999999999997 5899999999975
No 20
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=98.66 E-value=2.8e-08 Score=67.35 Aligned_cols=31 Identities=29% Similarity=0.454 Sum_probs=28.9
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
.+++||++||+.||.+|+|+.+++.||||++
T Consensus 263 ~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~ 293 (303)
T cd07869 263 HAEDLASKLLQCFPKNRLSAQAALSHEYFSD 293 (303)
T ss_pred HHHHHHHHHhccCchhccCHHHHhcCccccc
Confidence 3679999999999999999999999999975
No 21
>KOG0605|consensus
Probab=98.66 E-value=1.1e-08 Score=75.32 Aligned_cols=75 Identities=19% Similarity=0.190 Sum_probs=62.0
Q ss_pred eeeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHHHHH--------------------HHHHHHHHhccCcC
Q psy17425 7 KIINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARKVLQ--------------------LKDLLDKILMLDTS 66 (84)
Q Consensus 7 ~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~~~~--------------------~~~Ll~~~L~~dp~ 66 (84)
-|..++.+.|++.-....-++-...+|+||.|.+||.++++..+.. ++|||.++|. ||.
T Consensus 353 DYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~ 431 (550)
T KOG0605|consen 353 DYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPE 431 (550)
T ss_pred cccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHH
Confidence 3566777888876666666666677999999999999887766654 9999999998 999
Q ss_pred CCCC---HHHHhcCccccc
Q psy17425 67 KRLP---INQALTHPFILE 82 (84)
Q Consensus 67 ~R~s---~~~~l~hp~~~~ 82 (84)
+|.. ++||..||||++
T Consensus 432 ~RLG~~G~~EIK~HPfF~~ 450 (550)
T KOG0605|consen 432 NRLGSKGAEEIKKHPFFKG 450 (550)
T ss_pred HhcCcccHHHHhcCCcccc
Confidence 9985 899999999974
No 22
>KOG0583|consensus
Probab=98.66 E-value=1.9e-08 Score=71.57 Aligned_cols=75 Identities=17% Similarity=0.234 Sum_probs=57.0
Q ss_pred eeeecCCCCCc-eE-EEecccCCCchhhhhhcCCCCCChhHHHHHH-----------------HHHHHHHHHhccCcCCC
Q psy17425 8 IINFHFPPSQE-KI-VTMSTIHPTRDLHSELVGNQHLPDDQARKVL-----------------QLKDLLDKILMLDTSKR 68 (84)
Q Consensus 8 ~~~~d~~~~~~-~~-~~~~~~~p~~~L~~~l~g~~p~~~~~~~~~~-----------------~~~~Ll~~~L~~dp~~R 68 (84)
|+.+|.+.++. .. .....++-...||.|++|..||.+++...+. ++++||++||..||.+|
T Consensus 187 Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R 266 (370)
T KOG0583|consen 187 YAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLLSPEARSLIEKMLVPDPSTR 266 (370)
T ss_pred cCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcCCHHHHHHHHHHcCCCcccC
Confidence 55566666655 22 2233344455699999999999987644333 36999999999999999
Q ss_pred CCHHHHhcCccccc
Q psy17425 69 LPINQALTHPFILE 82 (84)
Q Consensus 69 ~s~~~~l~hp~~~~ 82 (84)
+++.+++.|||++.
T Consensus 267 ~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 267 ITLLEILEHPWFQK 280 (370)
T ss_pred CCHHHHhhChhhcc
Confidence 99999999999985
No 23
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=98.65 E-value=1.6e-08 Score=69.46 Aligned_cols=53 Identities=23% Similarity=0.368 Sum_probs=43.3
Q ss_pred chhhhhhcCCCCCChhHHHHHH----------------HHHHHHHHHhccCcCCCCCH------HHHhcCccccc
Q psy17425 30 RDLHSELVGNQHLPDDQARKVL----------------QLKDLLDKILMLDTSKRLPI------NQALTHPFILE 82 (84)
Q Consensus 30 ~~L~~~l~g~~p~~~~~~~~~~----------------~~~~Ll~~~L~~dp~~R~s~------~~~l~hp~~~~ 82 (84)
..+|++++|..||...+..... ++.+||++||..||.+|+++ .+++.||||..
T Consensus 184 ~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~ 258 (320)
T cd05590 184 VLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKE 258 (320)
T ss_pred HHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCC
Confidence 3478899999999765443322 27899999999999999998 99999999964
No 24
>KOG0604|consensus
Probab=98.63 E-value=3.1e-08 Score=69.62 Aligned_cols=58 Identities=24% Similarity=0.283 Sum_probs=46.0
Q ss_pred cCCCchhhhhhcCCCCCCh-----------------------hHHHHH-HHHHHHHHHHhccCcCCCCCHHHHhcCcccc
Q psy17425 26 IHPTRDLHSELVGNQHLPD-----------------------DQARKV-LQLKDLLDKILMLDTSKRLPINQALTHPFIL 81 (84)
Q Consensus 26 ~~p~~~L~~~l~g~~p~~~-----------------------~~~~~~-~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~ 81 (84)
+++...+|.++||.+||.. +++..+ ..++|+|+++|..+|.+|.|+.+.+.|||+.
T Consensus 247 wSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~ 326 (400)
T KOG0604|consen 247 WSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWIN 326 (400)
T ss_pred cchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhc
Confidence 3555678999999998843 222222 2399999999999999999999999999997
Q ss_pred cC
Q psy17425 82 EK 83 (84)
Q Consensus 82 ~~ 83 (84)
++
T Consensus 327 ~~ 328 (400)
T KOG0604|consen 327 QY 328 (400)
T ss_pred cc
Confidence 64
No 25
>KOG0580|consensus
Probab=98.62 E-value=1.9e-08 Score=68.52 Aligned_cols=79 Identities=14% Similarity=0.205 Sum_probs=64.8
Q ss_pred cceeeeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHHHHH----------------HHHHHHHHhccCcCC
Q psy17425 4 ISFKIINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARKVLQ----------------LKDLLDKILMLDTSK 67 (84)
Q Consensus 4 ~~f~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~~~~----------------~~~Ll~~~L~~dp~~ 67 (84)
|.|-+-.++.+.+.++...+..+.-..-.|+++.|.+||.+.+..++++ ++|||.+||..+|.+
T Consensus 184 gt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p~~is~~a~dlI~~ll~~~p~~ 263 (281)
T KOG0580|consen 184 GTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFPSTISGGAADLISRLLVKNPIE 263 (281)
T ss_pred cccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCCcccChhHHHHHHHHhccCccc
Confidence 3445555666777777777776666666899999999999877666654 999999999999999
Q ss_pred CCCHHHHhcCccccc
Q psy17425 68 RLPINQALTHPFILE 82 (84)
Q Consensus 68 R~s~~~~l~hp~~~~ 82 (84)
|.+..+++.|||+..
T Consensus 264 r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 264 RLALTEVMDHPWIVA 278 (281)
T ss_pred cccHHHHhhhHHHHh
Confidence 999999999999865
No 26
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=98.61 E-value=4.3e-08 Score=67.58 Aligned_cols=76 Identities=16% Similarity=0.189 Sum_probs=51.6
Q ss_pred eeeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHHH----------------HHHHHHHHHHhccCcCCCC-
Q psy17425 7 KIINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARKV----------------LQLKDLLDKILMLDTSKRL- 69 (84)
Q Consensus 7 ~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~~----------------~~~~~Ll~~~L~~dp~~R~- 69 (84)
.+..++.+.+.........++-...+|++++|..||...+.... .++.+||++||..||.+|+
T Consensus 160 ~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~ 239 (328)
T cd05593 160 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRTLSADAKSLLSGLLIKDPNKRLG 239 (328)
T ss_pred CccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCCCCCHHHHHHHHHHcCCCHHHcCC
Confidence 33444444433332222333334457889999999975443322 2389999999999999997
Q ss_pred ----CHHHHhcCccccc
Q psy17425 70 ----PINQALTHPFILE 82 (84)
Q Consensus 70 ----s~~~~l~hp~~~~ 82 (84)
++.+++.|||+..
T Consensus 240 ~~~~~~~~il~h~~~~~ 256 (328)
T cd05593 240 GGPDDAKEIMRHSFFTG 256 (328)
T ss_pred CCCCCHHHHhcCCCcCC
Confidence 8999999999964
No 27
>KOG0578|consensus
Probab=98.61 E-value=3.1e-08 Score=73.17 Aligned_cols=56 Identities=25% Similarity=0.412 Sum_probs=42.9
Q ss_pred cCCCchhhhhhcCCCCCChhHH-HHHH------------------HHHHHHHHHhccCcCCCCCHHHHhcCcccc
Q psy17425 26 IHPTRDLHSELVGNQHLPDDQA-RKVL------------------QLKDLLDKILMLDTSKRLPINQALTHPFIL 81 (84)
Q Consensus 26 ~~p~~~L~~~l~g~~p~~~~~~-~~~~------------------~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~ 81 (84)
++-....-+|+-|.+||..+++ +.++ .+++||.+||++|+.+|+++.++|.|||++
T Consensus 453 WSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~ 527 (550)
T KOG0578|consen 453 WSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLK 527 (550)
T ss_pred hhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhh
Confidence 3333335667788888875433 2222 299999999999999999999999999985
No 28
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.61 E-value=2e-08 Score=69.89 Aligned_cols=30 Identities=47% Similarity=0.873 Sum_probs=28.1
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+++||.+||..||.+|+|+.+++.|||+..
T Consensus 294 ~~dll~~mL~~dP~~R~t~~e~L~hp~~~~ 323 (364)
T cd07875 294 ARDLLSKMLVIDASKRISVDEALQHPYINV 323 (364)
T ss_pred HHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence 679999999999999999999999999963
No 29
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=98.60 E-value=2.8e-08 Score=66.42 Aligned_cols=28 Identities=36% Similarity=0.572 Sum_probs=26.9
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+.+||.+||..||.+|+|+.+++.||||
T Consensus 261 ~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 261 GAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred HHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 6799999999999999999999999997
No 30
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=98.60 E-value=1.6e-08 Score=68.74 Aligned_cols=28 Identities=36% Similarity=0.618 Sum_probs=26.9
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+.+||.+||+.||.+|+|++++++||||
T Consensus 290 ~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 290 AFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred HHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 6789999999999999999999999997
No 31
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=98.60 E-value=1.5e-08 Score=68.48 Aligned_cols=52 Identities=27% Similarity=0.409 Sum_probs=42.3
Q ss_pred hhhhhhcCCCCCChhHHHHHH----------------HHHHHHHHHhccCcCCCCC-----HHHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQARKVL----------------QLKDLLDKILMLDTSKRLP-----INQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~~~----------------~~~~Ll~~~L~~dp~~R~s-----~~~~l~hp~~~~ 82 (84)
.+|++++|..||...+..... .+++||++||..||.+|++ +++++.|||+..
T Consensus 187 il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 259 (291)
T cd05612 187 LIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKS 259 (291)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccC
Confidence 478899999999765433221 2799999999999999995 999999999964
No 32
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=98.59 E-value=1.9e-08 Score=67.66 Aligned_cols=52 Identities=13% Similarity=0.173 Sum_probs=41.2
Q ss_pred hhhhhhcCCCCCChhHH----H----------------HHHHHHHHHHHHhccCcCCCCC-----HHHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQA----R----------------KVLQLKDLLDKILMLDTSKRLP-----INQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~----~----------------~~~~~~~Ll~~~L~~dp~~R~s-----~~~~l~hp~~~~ 82 (84)
.+|++++|..||...+. . ....+.+||++||..||.+|++ +++++.||||.+
T Consensus 190 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~ 266 (285)
T cd05631 190 LIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKN 266 (285)
T ss_pred HHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcC
Confidence 47889999999964211 0 1113899999999999999997 899999999964
No 33
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=98.59 E-value=2.8e-08 Score=68.11 Aligned_cols=53 Identities=26% Similarity=0.474 Sum_probs=42.4
Q ss_pred chhhhhhcCCCCCChhHHHHHH----------------HHHHHHHHHhccCcCCCCCH-HHHhcCccccc
Q psy17425 30 RDLHSELVGNQHLPDDQARKVL----------------QLKDLLDKILMLDTSKRLPI-NQALTHPFILE 82 (84)
Q Consensus 30 ~~L~~~l~g~~p~~~~~~~~~~----------------~~~~Ll~~~L~~dp~~R~s~-~~~l~hp~~~~ 82 (84)
..+|++++|..||.+.+...+. ++++||++||..||.+|+++ ++++.||||..
T Consensus 184 vil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~ 253 (316)
T cd05620 184 VLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKT 253 (316)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCC
Confidence 3478899999999765443322 37899999999999999997 57889999964
No 34
>KOG0598|consensus
Probab=98.59 E-value=2.3e-08 Score=70.75 Aligned_cols=79 Identities=19% Similarity=0.184 Sum_probs=65.2
Q ss_pred cceeeeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHHHHH-----------------HHHHHHHHhccCcC
Q psy17425 4 ISFKIINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARKVLQ-----------------LKDLLDKILMLDTS 66 (84)
Q Consensus 4 ~~f~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~~~~-----------------~~~Ll~~~L~~dp~ 66 (84)
|..-+..++.+.+++..+.+.-++-..-+|+|++|.+||.+++.....+ +++||+++|.+||.
T Consensus 187 GT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~ 266 (357)
T KOG0598|consen 187 GTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYLSEEARDLLKKLLKRDPR 266 (357)
T ss_pred CCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccCCHHHHHHHHHHhccCHH
Confidence 4556677777888877777777776677999999999999887655443 89999999999999
Q ss_pred CCC----CHHHHhcCccccc
Q psy17425 67 KRL----PINQALTHPFILE 82 (84)
Q Consensus 67 ~R~----s~~~~l~hp~~~~ 82 (84)
+|. ++.++.+||||.+
T Consensus 267 ~RLg~~~d~~~ik~HpfF~~ 286 (357)
T KOG0598|consen 267 QRLGGPGDAEEIKRHPFFKG 286 (357)
T ss_pred HhcCCCCChHHhhcCccccc
Confidence 995 6899999999964
No 35
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=98.59 E-value=3e-08 Score=66.37 Aligned_cols=28 Identities=43% Similarity=0.656 Sum_probs=26.8
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+++||.+||..||++|||+.+++.||||
T Consensus 263 ~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 263 GKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred HHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 5799999999999999999999999997
No 36
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=98.57 E-value=5.1e-08 Score=66.79 Aligned_cols=53 Identities=19% Similarity=0.307 Sum_probs=43.4
Q ss_pred chhhhhhcCCCCCChhHHHHH----------------HHHHHHHHHHhccCcCCCC-------CHHHHhcCccccc
Q psy17425 30 RDLHSELVGNQHLPDDQARKV----------------LQLKDLLDKILMLDTSKRL-------PINQALTHPFILE 82 (84)
Q Consensus 30 ~~L~~~l~g~~p~~~~~~~~~----------------~~~~~Ll~~~L~~dp~~R~-------s~~~~l~hp~~~~ 82 (84)
..+|++++|..||...+.... .++.++|++||..||.+|+ ++.+++.|||+..
T Consensus 184 ~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~ 259 (321)
T cd05591 184 VLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKE 259 (321)
T ss_pred HHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCC
Confidence 357889999999976543322 2388999999999999999 8999999999864
No 37
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=98.57 E-value=4e-08 Score=67.68 Aligned_cols=30 Identities=43% Similarity=0.814 Sum_probs=28.1
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+.+||.+||..||.+|+|+.+++.||||..
T Consensus 274 ~~~li~~mL~~dp~~R~s~~ell~hp~~~~ 303 (343)
T cd07878 274 AIDLLEKMLVLDSDKRISASEALAHPYFSQ 303 (343)
T ss_pred HHHHHHHHcCCChhhCCCHHHHhcCcchhc
Confidence 579999999999999999999999999964
No 38
>PTZ00036 glycogen synthase kinase; Provisional
Probab=98.57 E-value=5.3e-08 Score=70.03 Aligned_cols=31 Identities=26% Similarity=0.430 Sum_probs=28.8
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
++++||++||..||.+|+|+.+++.||||.+
T Consensus 326 ~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~ 356 (440)
T PTZ00036 326 DAINFISQFLKYEPLKRLNPIEALADPFFDD 356 (440)
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhCChhHHh
Confidence 4789999999999999999999999999853
No 39
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=98.57 E-value=9.3e-08 Score=64.62 Aligned_cols=30 Identities=30% Similarity=0.576 Sum_probs=28.2
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+++||.+||..||.+|+|+.+++.||||..
T Consensus 262 ~~~li~~ml~~dp~~R~t~~eil~h~~f~~ 291 (301)
T cd07873 262 GAELLSKLLQFEGRKRISAEEAMKHPYFHC 291 (301)
T ss_pred HHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 679999999999999999999999999964
No 40
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=98.57 E-value=7.8e-08 Score=65.64 Aligned_cols=30 Identities=27% Similarity=0.510 Sum_probs=28.1
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+.++|.+||..||.+||++.+++.||||.+
T Consensus 266 ~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~ 295 (338)
T cd07859 266 ALRLLERLLAFDPKDRPTAEEALADPYFKG 295 (338)
T ss_pred HHHHHHHHcCcCcccCCCHHHHhcCchhhh
Confidence 579999999999999999999999999964
No 41
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=98.55 E-value=5.1e-08 Score=64.14 Aligned_cols=49 Identities=16% Similarity=0.254 Sum_probs=39.9
Q ss_pred hhhhhcCCCCCChhHHHHH------------------HHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 32 LHSELVGNQHLPDDQARKV------------------LQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~~------------------~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+|++++|..||.+.+.... ..+.++|++||..+|.+||++.+++.|+||
T Consensus 197 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 197 VVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred HHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 6778899999865332211 128899999999999999999999999997
No 42
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=98.55 E-value=8.3e-08 Score=65.17 Aligned_cols=31 Identities=26% Similarity=0.495 Sum_probs=28.8
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
++++||.+||..||.+|+|+.+++.||||+.
T Consensus 261 ~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~ 291 (309)
T cd07872 261 EGIELLTKFLQYESKKRISAEEAMKHAYFRS 291 (309)
T ss_pred HHHHHHHHhccCChhhCCCHHHHhcChhhhh
Confidence 3689999999999999999999999999974
No 43
>KOG0660|consensus
Probab=98.55 E-value=7.6e-08 Score=68.11 Aligned_cols=31 Identities=39% Similarity=0.727 Sum_probs=29.3
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCcccccC
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILEK 83 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~~ 83 (84)
+.|||++||+.||.+|+|++++|.|||+...
T Consensus 286 AidLlekmL~fdP~kRita~eAL~hPYl~~~ 316 (359)
T KOG0660|consen 286 AIDLLEKMLVFDPKKRITAEEALAHPYLAPY 316 (359)
T ss_pred HHHHHHHHhccCccccCCHHHHhcChhhhhh
Confidence 8999999999999999999999999999753
No 44
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=98.55 E-value=3.3e-08 Score=68.46 Aligned_cols=30 Identities=43% Similarity=0.855 Sum_probs=28.1
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+++||.+||..||.+|||+.+++.|||+..
T Consensus 287 ~~~li~~mL~~dP~~Rps~~ell~hp~~~~ 316 (355)
T cd07874 287 ARDLLSKMLVIDPAKRISVDEALQHPYINV 316 (355)
T ss_pred HHHHHHHHhcCCchhcCCHHHHhcCcchhc
Confidence 589999999999999999999999999963
No 45
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=98.55 E-value=8.9e-08 Score=65.73 Aligned_cols=53 Identities=26% Similarity=0.426 Sum_probs=43.3
Q ss_pred chhhhhhcCCCCCChhHHHHH----------------HHHHHHHHHHhccCcCCCC-----CHHHHhcCccccc
Q psy17425 30 RDLHSELVGNQHLPDDQARKV----------------LQLKDLLDKILMLDTSKRL-----PINQALTHPFILE 82 (84)
Q Consensus 30 ~~L~~~l~g~~p~~~~~~~~~----------------~~~~~Ll~~~L~~dp~~R~-----s~~~~l~hp~~~~ 82 (84)
..+|++++|..||...+.... ..+.+||.+||..||.+|+ ++.+++.|||+..
T Consensus 188 ~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~ 261 (323)
T cd05584 188 ALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRH 261 (323)
T ss_pred HHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCC
Confidence 348899999999976543322 1278999999999999999 8999999999864
No 46
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=98.54 E-value=5.2e-08 Score=66.87 Aligned_cols=54 Identities=20% Similarity=0.306 Sum_probs=43.0
Q ss_pred CchhhhhhcCCCCCChhHHHHH----------------HHHHHHHHHHhccCcCCCC-----CHHHHhcCccccc
Q psy17425 29 TRDLHSELVGNQHLPDDQARKV----------------LQLKDLLDKILMLDTSKRL-----PINQALTHPFILE 82 (84)
Q Consensus 29 ~~~L~~~l~g~~p~~~~~~~~~----------------~~~~~Ll~~~L~~dp~~R~-----s~~~~l~hp~~~~ 82 (84)
...+|++++|..||...+.... ..+.+||++||..||.+|+ ++.+++.|||+.+
T Consensus 183 G~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~ 257 (325)
T cd05594 183 GVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAG 257 (325)
T ss_pred cceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCC
Confidence 3457888999999865443322 1379999999999999997 8999999999964
No 47
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=98.54 E-value=5.9e-08 Score=67.52 Aligned_cols=54 Identities=22% Similarity=0.272 Sum_probs=44.0
Q ss_pred CchhhhhhcCCCCCChhHHHHHH----------------HHHHHHHHHhccCcCCCC-----CHHHHhcCccccc
Q psy17425 29 TRDLHSELVGNQHLPDDQARKVL----------------QLKDLLDKILMLDTSKRL-----PINQALTHPFILE 82 (84)
Q Consensus 29 ~~~L~~~l~g~~p~~~~~~~~~~----------------~~~~Ll~~~L~~dp~~R~-----s~~~~l~hp~~~~ 82 (84)
...+|++++|..||.+.+..... .++++|++||..||.+|+ ++++++.||||..
T Consensus 215 Gvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~ 289 (340)
T PTZ00426 215 GIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGN 289 (340)
T ss_pred hhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 34589999999999875443222 288999999999999996 8999999999964
No 48
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=98.54 E-value=3.4e-08 Score=68.24 Aligned_cols=31 Identities=26% Similarity=0.574 Sum_probs=28.8
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
++++||.+||..||.+||++.+++.|||++.
T Consensus 274 ~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~ 304 (333)
T cd06650 274 EFQDFVNKCLIKNPAERADLKQLMVHAFIKR 304 (333)
T ss_pred HHHHHHHHhccCCcccCcCHHHHhhCHHHhc
Confidence 3689999999999999999999999999965
No 49
>KOG0599|consensus
Probab=98.54 E-value=9.1e-08 Score=66.85 Aligned_cols=51 Identities=27% Similarity=0.502 Sum_probs=40.4
Q ss_pred hhhhhhcCCCCCChhHH-------------------HH-HHHHHHHHHHHhccCcCCCCCHHHHhcCcccc
Q psy17425 31 DLHSELVGNQHLPDDQA-------------------RK-VLQLKDLLDKILMLDTSKRLPINQALTHPFIL 81 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~-------------------~~-~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~ 81 (84)
-+|+++.|++||-.-.. .. +...+|||+++|++||.+|.|+.|+|.||||.
T Consensus 217 ImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~ 287 (411)
T KOG0599|consen 217 IMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFI 287 (411)
T ss_pred HHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHH
Confidence 47888888888843222 11 22389999999999999999999999999994
No 50
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=98.53 E-value=7.2e-08 Score=63.66 Aligned_cols=49 Identities=29% Similarity=0.489 Sum_probs=39.6
Q ss_pred hhhhhcCCCCCChhHHHH-----------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 32 LHSELVGNQHLPDDQARK-----------------VLQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~-----------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+|++++|..||.+.+... ...+.++|++||..||.+||++.+++.||||
T Consensus 202 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 202 VVEMLTGKHPFPDCTQLQAIFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred HHHHhhCCCCCCCccHHHHHHHHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 677889999987532211 1128999999999999999999999999997
No 51
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=98.53 E-value=8.2e-08 Score=65.86 Aligned_cols=52 Identities=21% Similarity=0.453 Sum_probs=42.3
Q ss_pred hhhhhhcCCCCCChhHHHHHH----------------HHHHHHHHHhccCcCCCC-----CHHHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQARKVL----------------QLKDLLDKILMLDTSKRL-----PINQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~~~----------------~~~~Ll~~~L~~dp~~R~-----s~~~~l~hp~~~~ 82 (84)
-+|++++|..||...+..... .+.+||.+||..||.+|+ ++.+++.||||..
T Consensus 190 il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~ 262 (324)
T cd05589 190 LIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRD 262 (324)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCC
Confidence 478899999999764433221 278999999999999999 6999999999864
No 52
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=98.52 E-value=4.5e-08 Score=67.06 Aligned_cols=52 Identities=27% Similarity=0.415 Sum_probs=42.4
Q ss_pred hhhhhhcCCCCCChhHHHHHH----------------HHHHHHHHHhccCcCCCCCH-----HHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQARKVL----------------QLKDLLDKILMLDTSKRLPI-----NQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~~~----------------~~~~Ll~~~L~~dp~~R~s~-----~~~l~hp~~~~ 82 (84)
-+|++++|..||...+..... .+.+||++||..||.+|+++ .+++.|||+..
T Consensus 185 il~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~ 257 (318)
T cd05570 185 LLYEMLAGQSPFEGDDEDELFQSILEDEVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFRE 257 (318)
T ss_pred HHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 377888999999764433221 27899999999999999999 99999999964
No 53
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=98.52 E-value=1e-07 Score=64.68 Aligned_cols=30 Identities=33% Similarity=0.432 Sum_probs=28.4
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+.+||.+||..||++|||+.+++.||||.+
T Consensus 266 ~~~li~~ml~~dp~~R~t~~~il~h~~f~~ 295 (309)
T cd07845 266 GLRLLNFLLMYDPKKRATAEEALESSYFKE 295 (309)
T ss_pred HHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 678999999999999999999999999975
No 54
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=98.52 E-value=1.2e-07 Score=63.32 Aligned_cols=50 Identities=24% Similarity=0.303 Sum_probs=40.1
Q ss_pred hhhhhhcCCCCCChhHHHH------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 31 DLHSELVGNQHLPDDQARK------------------VLQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
.+|++++|..||.+..... ...+.+||++||..||.+||++.+++.|||+
T Consensus 215 ~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 215 TAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred HHHHHHhCCCCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 3778889998886432111 1237999999999999999999999999997
No 55
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=98.51 E-value=1.6e-07 Score=62.41 Aligned_cols=30 Identities=40% Similarity=0.658 Sum_probs=28.1
Q ss_pred HHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 51 LQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 51 ~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
..+.++|.+||..+|.+||++.+++.||||
T Consensus 253 ~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 253 AEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred HHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 348899999999999999999999999997
No 56
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=98.51 E-value=5.3e-08 Score=66.82 Aligned_cols=52 Identities=25% Similarity=0.478 Sum_probs=42.0
Q ss_pred hhhhhhcCCCCCChhHHHHHH----------------HHHHHHHHHhccCcCCCCCHH-HHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQARKVL----------------QLKDLLDKILMLDTSKRLPIN-QALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~~~----------------~~~~Ll~~~L~~dp~~R~s~~-~~l~hp~~~~ 82 (84)
.+|++++|..||...+...+. .++++|.+||..||.+|+++. +++.|||+..
T Consensus 185 il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~ 253 (316)
T cd05619 185 LLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFRE 253 (316)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCC
Confidence 478899999999765433222 278999999999999999996 8999999864
No 57
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=98.50 E-value=5.6e-08 Score=63.87 Aligned_cols=50 Identities=18% Similarity=0.196 Sum_probs=40.3
Q ss_pred hhhhhhcCCCCCChhHHH----------------------HHHHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 31 DLHSELVGNQHLPDDQAR----------------------KVLQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~----------------------~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
.++++++|..||.+.+.. ....+.+++.+|+..||.+||++.+++.||||
T Consensus 196 i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 196 TAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred HHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 467788899888654321 12337899999999999999999999999997
No 58
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=98.50 E-value=1.3e-07 Score=64.82 Aligned_cols=31 Identities=16% Similarity=0.372 Sum_probs=28.7
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
++.+||++||+.||.+|||++++++||||+.
T Consensus 282 ~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~ 312 (327)
T cd08227 282 HFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 312 (327)
T ss_pred HHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence 4779999999999999999999999999964
No 59
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=98.50 E-value=1.7e-07 Score=61.70 Aligned_cols=49 Identities=22% Similarity=0.298 Sum_probs=39.4
Q ss_pred hhhhhcCCCCCChhHHH-------------------HHHHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 32 LHSELVGNQHLPDDQAR-------------------KVLQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~-------------------~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+|++++|..||.+.... ....+++||++||..||.+|||+.+++.|||+
T Consensus 208 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 208 AIELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred HHHHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 67788899998653211 11237899999999999999999999999996
No 60
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=98.49 E-value=1.4e-07 Score=63.95 Aligned_cols=28 Identities=39% Similarity=0.655 Sum_probs=26.7
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+.+||.+||+.||.+|+|+.+++.||||
T Consensus 290 ~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 290 VFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred HHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 6689999999999999999999999997
No 61
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=98.49 E-value=1.3e-07 Score=65.01 Aligned_cols=77 Identities=18% Similarity=0.135 Sum_probs=52.5
Q ss_pred ceeeeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHH--------------------HHHHHHHHHHHhccC
Q psy17425 5 SFKIINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARK--------------------VLQLKDLLDKILMLD 64 (84)
Q Consensus 5 ~f~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~--------------------~~~~~~Ll~~~L~~d 64 (84)
+..+..++.+.+.........++-...+|++++|..||...+... ...+.+||.+||. |
T Consensus 193 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-d 271 (350)
T cd05573 193 TPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-D 271 (350)
T ss_pred CccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-C
Confidence 334444554444433333333344456899999999997643221 1237899999997 9
Q ss_pred cCCCCC-HHHHhcCccccc
Q psy17425 65 TSKRLP-INQALTHPFILE 82 (84)
Q Consensus 65 p~~R~s-~~~~l~hp~~~~ 82 (84)
|.+|++ +.+++.|||+.+
T Consensus 272 p~~R~~s~~~ll~hp~~~~ 290 (350)
T cd05573 272 PEDRLGSFEEIKSHPFFKG 290 (350)
T ss_pred hhhcCCCHHHHhcCCCcCC
Confidence 999999 999999999964
No 62
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=98.49 E-value=1.8e-07 Score=61.95 Aligned_cols=49 Identities=22% Similarity=0.352 Sum_probs=39.3
Q ss_pred hhhhhcCCCCCChhHHHH------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 32 LHSELVGNQHLPDDQARK------------------VLQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+|++++|..||.+..... ...+.+|+.+||..||.+||++.+++.||||
T Consensus 206 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 206 AIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred HHHHHhCCCCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 678889998885422111 1248999999999999999999999999997
No 63
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=98.49 E-value=1.6e-07 Score=62.57 Aligned_cols=28 Identities=43% Similarity=0.755 Sum_probs=26.7
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
++++|.+||..||.+||++.+++.||||
T Consensus 257 ~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 257 GRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred HHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 6789999999999999999999999997
No 64
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=98.49 E-value=1e-07 Score=62.55 Aligned_cols=50 Identities=16% Similarity=0.295 Sum_probs=40.2
Q ss_pred hhhhhhcCCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 31 DLHSELVGNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
-++++++|..||...+.... .++.++|.+|+..+|.+||++.+++.||||
T Consensus 190 i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 190 VLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred HHHHHHcCCCCccCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 36778889888865433221 237899999999999999999999999997
No 65
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=98.48 E-value=1.6e-07 Score=64.49 Aligned_cols=77 Identities=14% Similarity=0.070 Sum_probs=53.0
Q ss_pred eeeeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHH------------------------HHHHHHHHHHHh
Q psy17425 6 FKIINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARK------------------------VLQLKDLLDKIL 61 (84)
Q Consensus 6 f~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~------------------------~~~~~~Ll~~~L 61 (84)
..+..++.+.+.........++-...+|++++|..||...+... ..++.+||.+||
T Consensus 162 ~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l 241 (333)
T cd05600 162 PDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLI 241 (333)
T ss_pred ccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHh
Confidence 34444554444433333333333445889999999997543221 234789999999
Q ss_pred ccCcCCCCCHHHHhcCccccc
Q psy17425 62 MLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 62 ~~dp~~R~s~~~~l~hp~~~~ 82 (84)
..+|.+|+++.+++.|||+.+
T Consensus 242 ~~~~~rr~s~~~ll~h~~~~~ 262 (333)
T cd05600 242 NDPSRRFGSLEDIKNHPFFKE 262 (333)
T ss_pred hChhhhcCCHHHHHhCcccCC
Confidence 999999999999999999975
No 66
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=98.48 E-value=4.9e-08 Score=65.82 Aligned_cols=52 Identities=17% Similarity=0.296 Sum_probs=41.3
Q ss_pred hhhhhhcCCCCCChhH-------HHH-------------HHHHHHHHHHHhccCcCCCCC-----HHHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQ-------ARK-------------VLQLKDLLDKILMLDTSKRLP-----INQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~-------~~~-------------~~~~~~Ll~~~L~~dp~~R~s-----~~~~l~hp~~~~ 82 (84)
.+|++++|..||.... ... ...+.+||++||..||.+|+| +.+++.||||.+
T Consensus 190 ~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~ 266 (285)
T cd05630 190 LLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ 266 (285)
T ss_pred HHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence 4788999999997421 110 112899999999999999999 899999999974
No 67
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=98.47 E-value=1.3e-07 Score=64.76 Aligned_cols=54 Identities=22% Similarity=0.254 Sum_probs=43.1
Q ss_pred CchhhhhhcCCCCCChhHHHHHH----------------HHHHHHHHHhccCcCCCCCH----HHHhcCccccc
Q psy17425 29 TRDLHSELVGNQHLPDDQARKVL----------------QLKDLLDKILMLDTSKRLPI----NQALTHPFILE 82 (84)
Q Consensus 29 ~~~L~~~l~g~~p~~~~~~~~~~----------------~~~~Ll~~~L~~dp~~R~s~----~~~l~hp~~~~ 82 (84)
...+|++++|..||...+..... .+.++|++||..||.+|+++ .+++.||||..
T Consensus 183 G~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~ 256 (323)
T cd05575 183 GAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSS 256 (323)
T ss_pred chhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCC
Confidence 34588899999999765433222 28999999999999999987 69999999854
No 68
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=98.47 E-value=1.1e-07 Score=62.86 Aligned_cols=49 Identities=20% Similarity=0.222 Sum_probs=39.0
Q ss_pred hhhhhcCCCCCChhHHHH-------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 32 LHSELVGNQHLPDDQARK-------------------VLQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~-------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+|++++|..||...+... ...+.++|++||..+|.+||++.+++.|||+
T Consensus 198 ~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 198 VFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred HHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 677888998886422111 1127899999999999999999999999997
No 69
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=98.47 E-value=1.2e-07 Score=65.20 Aligned_cols=53 Identities=21% Similarity=0.353 Sum_probs=42.8
Q ss_pred chhhhhhcCCCCCChhHHHHH----------------HHHHHHHHHHhccCcCCCC-----CHHHHhcCccccc
Q psy17425 30 RDLHSELVGNQHLPDDQARKV----------------LQLKDLLDKILMLDTSKRL-----PINQALTHPFILE 82 (84)
Q Consensus 30 ~~L~~~l~g~~p~~~~~~~~~----------------~~~~~Ll~~~L~~dp~~R~-----s~~~~l~hp~~~~ 82 (84)
..+|++++|..||...+.... ..+.+||++||..||.+|+ ++.+++.|+||.+
T Consensus 183 vil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~ 256 (323)
T cd05595 183 VVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 256 (323)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCC
Confidence 347889999999965433222 2378999999999999998 8999999999964
No 70
>KOG0694|consensus
Probab=98.47 E-value=7e-08 Score=72.77 Aligned_cols=74 Identities=20% Similarity=0.259 Sum_probs=57.9
Q ss_pred eeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHHHHH----------------HHHHHHHHhccCcCCCCC--
Q psy17425 9 INFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARKVLQ----------------LKDLLDKILMLDTSKRLP-- 70 (84)
Q Consensus 9 ~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~~~~----------------~~~Ll~~~L~~dp~~R~s-- 70 (84)
..++.+++....+-+.-+.-..-||+||.|..||++++-+++.+ +.++++++|+++|.+|..
T Consensus 535 ~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~ 614 (694)
T KOG0694|consen 535 LAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGSG 614 (694)
T ss_pred cChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCcccHHHHHHHHHHhccCcccccCCC
Confidence 34555666666665554554556899999999999877766654 999999999999999995
Q ss_pred ---HHHHhcCccccc
Q psy17425 71 ---INQALTHPFILE 82 (84)
Q Consensus 71 ---~~~~l~hp~~~~ 82 (84)
++++..||||+.
T Consensus 615 e~d~~~i~~hpFFr~ 629 (694)
T KOG0694|consen 615 ERDAEDIKKHPFFRS 629 (694)
T ss_pred CCCchhhhhCCcccc
Confidence 588999999964
No 71
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=98.46 E-value=1.1e-07 Score=65.19 Aligned_cols=52 Identities=17% Similarity=0.266 Sum_probs=41.9
Q ss_pred hhhhhhcCCCCCChhHHHHHH----------------HHHHHHHHHhccCcCCCCCH-----HHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQARKVL----------------QLKDLLDKILMLDTSKRLPI-----NQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~~~----------------~~~~Ll~~~L~~dp~~R~s~-----~~~l~hp~~~~ 82 (84)
.+|++++|..||...+..... .+.++|.+||..||.+|++. .+++.||||..
T Consensus 190 il~elltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~ 262 (324)
T cd05587 190 LLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRR 262 (324)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 478899999999764433222 27899999999999999976 89999999864
No 72
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=98.46 E-value=3.1e-07 Score=60.09 Aligned_cols=49 Identities=27% Similarity=0.487 Sum_probs=39.7
Q ss_pred hhhhhcCCCCCChh---HHHHH--------------------HHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 32 LHSELVGNQHLPDD---QARKV--------------------LQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~---~~~~~--------------------~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
++++++|..||.+. +.... ..+.++|.+||..||.+||++.++++||||
T Consensus 189 l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 189 LYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred cccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 67788998888764 11111 238999999999999999999999999997
No 73
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=98.46 E-value=1.2e-07 Score=63.79 Aligned_cols=52 Identities=15% Similarity=0.246 Sum_probs=41.7
Q ss_pred hhhhhhcCCCCCChhHHH--------------------HHHHHHHHHHHHhccCcCCCC-----CHHHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQAR--------------------KVLQLKDLLDKILMLDTSKRL-----PINQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~--------------------~~~~~~~Ll~~~L~~dp~~R~-----s~~~~l~hp~~~~ 82 (84)
.+|++++|..||.+.+.. ....+.+||.+||..||.+|+ ++.+++.|||+..
T Consensus 190 ~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~ 266 (285)
T cd05605 190 LIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRT 266 (285)
T ss_pred HHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccC
Confidence 478899999999753221 011279999999999999999 8999999999974
No 74
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=98.45 E-value=1.6e-07 Score=61.56 Aligned_cols=49 Identities=16% Similarity=0.292 Sum_probs=39.4
Q ss_pred hhhhhcCCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 32 LHSELVGNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
++++++|..||...+.... ..+.++|.+|+..||.+||++.++++|||+
T Consensus 192 l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 192 VYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 6778888888865332221 238999999999999999999999999997
No 75
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=98.45 E-value=9.9e-08 Score=62.47 Aligned_cols=49 Identities=16% Similarity=0.329 Sum_probs=38.9
Q ss_pred hhhhhcCCCCCChhHHHH-----------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 32 LHSELVGNQHLPDDQARK-----------------VLQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~-----------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+++++.|..||...+... ..++.++|.+|+..+|.+|||+.+++.|||+
T Consensus 192 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 192 LYELCTLKHPFEGNNLHQLVLKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred HHHHHhCCCCCCCccHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 566778888886533221 1138999999999999999999999999996
No 76
>KOG0596|consensus
Probab=98.45 E-value=2.2e-07 Score=69.27 Aligned_cols=54 Identities=24% Similarity=0.275 Sum_probs=43.5
Q ss_pred CchhhhhhcCCCCCChhHHHH--HH------------------HHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 29 TRDLHSELVGNQHLPDDQARK--VL------------------QLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 29 ~~~L~~~l~g~~p~~~~~~~~--~~------------------~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
..-||+|+.|++||..-..-. +. +++++++.||.+||++||++.++|+|||++.
T Consensus 559 GCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 559 GCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQI 632 (677)
T ss_pred hhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence 345899999999997643110 00 1899999999999999999999999999864
No 77
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=98.45 E-value=1.9e-07 Score=64.06 Aligned_cols=51 Identities=20% Similarity=0.311 Sum_probs=40.5
Q ss_pred hhhhhhcCCCCCChhHHHH--------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQARK--------------------VLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~--------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
.+|++++|..||.+.+... ...+++||++||. +|.+|+++.+++.|||+..
T Consensus 198 il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~ 268 (330)
T cd05601 198 IAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSK 268 (330)
T ss_pred eeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCC
Confidence 4788889998986543211 1237999999997 9999999999999999864
No 78
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=98.45 E-value=5.7e-08 Score=65.23 Aligned_cols=52 Identities=19% Similarity=0.243 Sum_probs=41.2
Q ss_pred hhhhhhcCCCCCChhHH----H----------------HHHHHHHHHHHHhccCcCCCC-----CHHHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQA----R----------------KVLQLKDLLDKILMLDTSKRL-----PINQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~----~----------------~~~~~~~Ll~~~L~~dp~~R~-----s~~~~l~hp~~~~ 82 (84)
.+|++++|..||..... . ....+.+++.+||..||.+|+ +++++++||||++
T Consensus 186 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~ 262 (280)
T cd05608 186 TLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRD 262 (280)
T ss_pred HHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhc
Confidence 47888899999864211 1 112389999999999999999 8899999999975
No 79
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=98.44 E-value=1.5e-07 Score=64.65 Aligned_cols=52 Identities=13% Similarity=0.232 Sum_probs=41.9
Q ss_pred hhhhhhcCCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCC----CHHHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRL----PINQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~----s~~~~l~hp~~~~ 82 (84)
.+|+|++|..||...+.... ..+.+||++||..||.+|+ ++.+++.|||+..
T Consensus 186 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~ 258 (330)
T cd05586 186 LVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFAD 258 (330)
T ss_pred EEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccC
Confidence 47888999999876443321 2378999999999999998 7999999999964
No 80
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=98.44 E-value=3.1e-07 Score=61.16 Aligned_cols=28 Identities=43% Similarity=0.788 Sum_probs=26.8
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+++||++||..||.+|||+.+++.||||
T Consensus 258 ~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 258 GLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred HHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 5689999999999999999999999997
No 81
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=98.43 E-value=2.6e-07 Score=64.52 Aligned_cols=30 Identities=37% Similarity=0.660 Sum_probs=28.4
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+.+||.+||..||.+|+|+.+++.|||+.+
T Consensus 264 ~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 293 (372)
T cd07853 264 AVHLLCRMLVFDPDKRISAADALAHPYLDE 293 (372)
T ss_pred HHHHHHHhCCCChhhCcCHHHHhcCHhhCC
Confidence 679999999999999999999999999975
No 82
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=98.43 E-value=1.5e-07 Score=63.01 Aligned_cols=30 Identities=43% Similarity=0.647 Sum_probs=28.0
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCcccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFIL 81 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~ 81 (84)
.+.+||.+||..||.+||++.+++.|||+.
T Consensus 266 ~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 266 EGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred HHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 378999999999999999999999999984
No 83
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=98.43 E-value=1.6e-07 Score=64.17 Aligned_cols=53 Identities=17% Similarity=0.330 Sum_probs=41.7
Q ss_pred chhhhhhcCCCCCChhHHHHH----------------HHHHHHHHHHhccCcCCCCC-----HHHHhcCccccc
Q psy17425 30 RDLHSELVGNQHLPDDQARKV----------------LQLKDLLDKILMLDTSKRLP-----INQALTHPFILE 82 (84)
Q Consensus 30 ~~L~~~l~g~~p~~~~~~~~~----------------~~~~~Ll~~~L~~dp~~R~s-----~~~~l~hp~~~~ 82 (84)
..+|++++|..||...+.... ..+.+||++||..||.+|++ +.+++.|||+..
T Consensus 186 ~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~ 259 (318)
T cd05582 186 VLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFST 259 (318)
T ss_pred eEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCC
Confidence 347888899999875433221 12789999999999999999 788999999864
No 84
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=98.43 E-value=1.4e-07 Score=62.70 Aligned_cols=51 Identities=24% Similarity=0.272 Sum_probs=41.1
Q ss_pred hhhhhcCCCCCChhHHHH------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQARK------------------VLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+|++++|..||...+... ...+.++|.+||..||++||++++++.|||+..
T Consensus 188 l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~ 256 (274)
T cd06609 188 AIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKK 256 (274)
T ss_pred HHHHHhCCCCcccCchHHHHHHhhhcCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcC
Confidence 677889999986432211 123889999999999999999999999999975
No 85
>KOG0585|consensus
Probab=98.43 E-value=2.3e-07 Score=68.17 Aligned_cols=57 Identities=25% Similarity=0.396 Sum_probs=49.0
Q ss_pred CCCchhhhhhcCCCCCChhHHHHHHH------------------HHHHHHHHhccCcCCCCCHHHHhcCcccccC
Q psy17425 27 HPTRDLHSELVGNQHLPDDQARKVLQ------------------LKDLLDKILMLDTSKRLPINQALTHPFILEK 83 (84)
Q Consensus 27 ~p~~~L~~~l~g~~p~~~~~~~~~~~------------------~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~~ 83 (84)
.-...||.++.|..||.++..-.+.+ ++|||.+||.+||.+|++..++..|||...+
T Consensus 304 alGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 304 ALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred hhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 33446999999999999877665554 8999999999999999999999999998754
No 86
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=98.42 E-value=3.2e-07 Score=60.01 Aligned_cols=49 Identities=27% Similarity=0.361 Sum_probs=38.9
Q ss_pred hhhhhcCCCCCChhHHHH-------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 32 LHSELVGNQHLPDDQARK-------------------VLQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~-------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+++++.|..||....... ...+.++|.+|+..||.+||++.+++.|||+
T Consensus 189 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 189 AIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred HHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 667888888876432111 1247899999999999999999999999996
No 87
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=98.42 E-value=1.1e-07 Score=62.59 Aligned_cols=52 Identities=23% Similarity=0.410 Sum_probs=40.6
Q ss_pred hhhhhhcCCCCCChhHHHH--------------------HHHHHHHHHHHhccCcCCCCC---HHHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQARK--------------------VLQLKDLLDKILMLDTSKRLP---INQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~--------------------~~~~~~Ll~~~L~~dp~~R~s---~~~~l~hp~~~~ 82 (84)
-+|++++|..||...+... ...+.++|++||..||.+|++ +.+++.|||+..
T Consensus 182 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~ 256 (260)
T cd05611 182 VIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKS 256 (260)
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhc
Confidence 3677889999986533222 123899999999999999995 579999999975
No 88
>PHA03212 serine/threonine kinase US3; Provisional
Probab=98.42 E-value=7.4e-08 Score=68.38 Aligned_cols=31 Identities=23% Similarity=0.314 Sum_probs=29.0
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
++.+||.+||..||.+|||+.+++.||||++
T Consensus 351 ~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~ 381 (391)
T PHA03212 351 DLEYLICKMLAFDAHHRPSAEALLDFAAFQD 381 (391)
T ss_pred hHHHHHHHHhcCChhhCCCHHHHhcChhhcc
Confidence 4789999999999999999999999999975
No 89
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=98.41 E-value=3.9e-07 Score=61.14 Aligned_cols=50 Identities=22% Similarity=0.258 Sum_probs=39.6
Q ss_pred hhhhhcCCCCCChhHHH-------------------HHHHHHHHHHHHhccCcCCCCCHHHHhcCcccc
Q psy17425 32 LHSELVGNQHLPDDQAR-------------------KVLQLKDLLDKILMLDTSKRLPINQALTHPFIL 81 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~-------------------~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~ 81 (84)
+|++++|..||...+.. ....+++||.+|+..||.+||++.+++.|||++
T Consensus 223 ~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 223 AIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred HHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 67788898888653211 011278999999999999999999999999984
No 90
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=98.41 E-value=2.7e-07 Score=63.80 Aligned_cols=31 Identities=45% Similarity=0.789 Sum_probs=28.8
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
.+.+||.+||..||.+|||+.+++.|||+..
T Consensus 273 ~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~ 303 (343)
T cd07851 273 LAIDLLEKMLVLDPDKRITAAEALAHPYLAE 303 (343)
T ss_pred HHHHHHHHhCCCChhhCCCHHHHhcCCCccc
Confidence 4789999999999999999999999999964
No 91
>PHA03207 serine/threonine kinase US3; Provisional
Probab=98.41 E-value=6e-08 Score=68.47 Aligned_cols=31 Identities=23% Similarity=0.401 Sum_probs=28.6
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
++++||.+||+.||++||++.+++.||||..
T Consensus 350 ~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~ 380 (392)
T PHA03207 350 DVEYLIAKMLTFDQEFRPSAQDILSLPLFTK 380 (392)
T ss_pred hHHHHHHHHhccChhhCCCHHHHhhCchhhc
Confidence 3678999999999999999999999999974
No 92
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=98.41 E-value=3.7e-07 Score=61.86 Aligned_cols=31 Identities=23% Similarity=0.397 Sum_probs=28.6
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
++.+|+.+||..||.+|||+++++.|||++.
T Consensus 270 ~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~ 300 (314)
T cd08216 270 HFHQFVELCLQRDPESRPSASQLLNHSFFKQ 300 (314)
T ss_pred HHHHHHHHHhhcCCCcCcCHHHHhcCchHhh
Confidence 3778999999999999999999999999864
No 93
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=98.41 E-value=2.3e-07 Score=64.38 Aligned_cols=51 Identities=22% Similarity=0.321 Sum_probs=40.8
Q ss_pred hhhhhcCCCCCChhHH---H-----------------HHHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQA---R-----------------KVLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~---~-----------------~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+|++++|..||..... . ...++++||.+||..||.+|+++.+++.|||+.+
T Consensus 263 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~ 333 (353)
T PLN00034 263 ILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILR 333 (353)
T ss_pred HHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCccccc
Confidence 6788899999863211 0 0124899999999999999999999999999965
No 94
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=98.41 E-value=9.6e-08 Score=63.84 Aligned_cols=51 Identities=22% Similarity=0.390 Sum_probs=40.2
Q ss_pred hhhhhhcCCCCCChhHHH--------------------HHHHHHHHHHHHhccCcCCCCC-HHHHhcCcccc
Q psy17425 31 DLHSELVGNQHLPDDQAR--------------------KVLQLKDLLDKILMLDTSKRLP-INQALTHPFIL 81 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~--------------------~~~~~~~Ll~~~L~~dp~~R~s-~~~~l~hp~~~ 81 (84)
.+|++++|..||...... ....+++||.+||..+|.+|++ .+++++||||.
T Consensus 195 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~ 266 (267)
T PHA03390 195 LTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK 266 (267)
T ss_pred HHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCccc
Confidence 378888999998643211 1123899999999999999996 59999999985
No 95
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=98.41 E-value=1.2e-07 Score=65.75 Aligned_cols=29 Identities=45% Similarity=0.887 Sum_probs=27.6
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCcccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFIL 81 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~ 81 (84)
+++||.+||..||.+|||+.+++.|||+.
T Consensus 287 ~~~li~~~L~~dP~~R~t~~eiL~~~~~~ 315 (353)
T cd07850 287 ARDLLSKMLVIDPEKRISVDDALQHPYIN 315 (353)
T ss_pred HHHHHHHHcCCChhhCcCHHHHhcChhHh
Confidence 67999999999999999999999999885
No 96
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=98.41 E-value=2e-07 Score=61.79 Aligned_cols=50 Identities=18% Similarity=0.301 Sum_probs=37.0
Q ss_pred hhhhhhcCCCCCChhHHHH------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCcccc
Q psy17425 31 DLHSELVGNQHLPDDQARK------------------VLQLKDLLDKILMLDTSKRLPINQALTHPFIL 81 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~ 81 (84)
.+|++++|..||.+..... ...+++|| +|+..+|.+||++++++.||||.
T Consensus 198 i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 198 TVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred HHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 3677888999886432111 11267888 56668999999999999999985
No 97
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=98.40 E-value=2e-07 Score=60.59 Aligned_cols=49 Identities=24% Similarity=0.371 Sum_probs=39.7
Q ss_pred hhhhhcCCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 32 LHSELVGNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+++++.|..||...+.... ..+.+++.+||..+|.+||++.+++.|||+
T Consensus 193 ~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 193 LYELCTLKHPFEGENLLELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred HHHHHcCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 5667788888866533322 238899999999999999999999999996
No 98
>KOG0603|consensus
Probab=98.40 E-value=1.1e-07 Score=71.04 Aligned_cols=50 Identities=28% Similarity=0.420 Sum_probs=41.6
Q ss_pred hhhhhhcCCCCCChhHHH-HH--------------HHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 31 DLHSELVGNQHLPDDQAR-KV--------------LQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~-~~--------------~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
-||+||+|..||...... ++ ..+++||++||++||.+|+++.++..|||+
T Consensus 502 lLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 502 LLYEMLTGRTLFAAHPAGIEIHTRIQMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred HHHHHHhCCCccccCCchHHHHHhhcCCccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 489999999988643222 11 129999999999999999999999999999
No 99
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=98.40 E-value=4.8e-07 Score=59.16 Aligned_cols=49 Identities=16% Similarity=0.281 Sum_probs=39.7
Q ss_pred hhhhhcCCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 32 LHSELVGNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+++++.|..||...+.... ..+.+++.+||..+|.+||++.+++.|||+
T Consensus 200 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 200 IYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred HHHHHHCCCcccCcCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 5778889888875432222 238899999999999999999999999996
No 100
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=98.39 E-value=2.9e-07 Score=61.23 Aligned_cols=28 Identities=29% Similarity=0.570 Sum_probs=27.0
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+.+||.+||..||.+||++.+++.||||
T Consensus 259 ~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 259 ALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred HHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 6799999999999999999999999997
No 101
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=98.39 E-value=2.2e-07 Score=63.66 Aligned_cols=54 Identities=15% Similarity=0.179 Sum_probs=43.0
Q ss_pred CchhhhhhcCCCCCChhHHHHH----------------HHHHHHHHHHhccCcCCCCCH-----HHHhcCccccc
Q psy17425 29 TRDLHSELVGNQHLPDDQARKV----------------LQLKDLLDKILMLDTSKRLPI-----NQALTHPFILE 82 (84)
Q Consensus 29 ~~~L~~~l~g~~p~~~~~~~~~----------------~~~~~Ll~~~L~~dp~~R~s~-----~~~l~hp~~~~ 82 (84)
...+|++++|..||...+...+ .++.+++.+||..||.+|+++ .+++.|||+..
T Consensus 188 Gvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~ 262 (323)
T cd05616 188 GVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 262 (323)
T ss_pred hHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCC
Confidence 3457889999999986544322 238899999999999999974 89999999863
No 102
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=98.39 E-value=1.2e-07 Score=64.46 Aligned_cols=51 Identities=29% Similarity=0.425 Sum_probs=41.4
Q ss_pred hhhhhcCCCCCChhHHHH------------------HHHHHHHHHHHhccCcCCCCC----HHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQARK------------------VLQLKDLLDKILMLDTSKRLP----INQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~------------------~~~~~~Ll~~~L~~dp~~R~s----~~~~l~hp~~~~ 82 (84)
+|++++|..||...+... ...+.++|++||..||.+|++ +.+++.||||+.
T Consensus 222 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~ 294 (316)
T cd05574 222 LYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRG 294 (316)
T ss_pred HHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhc
Confidence 778889999986443211 123899999999999999999 999999999865
No 103
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.38 E-value=1.8e-07 Score=64.24 Aligned_cols=53 Identities=26% Similarity=0.329 Sum_probs=41.2
Q ss_pred chhhhhhcCCCCCChhH----HHH----------------HHHHHHHHHHHhccCcCCCC-----CHHHHhcCccccc
Q psy17425 30 RDLHSELVGNQHLPDDQ----ARK----------------VLQLKDLLDKILMLDTSKRL-----PINQALTHPFILE 82 (84)
Q Consensus 30 ~~L~~~l~g~~p~~~~~----~~~----------------~~~~~~Ll~~~L~~dp~~R~-----s~~~~l~hp~~~~ 82 (84)
..+|++++|..||.... ... ...+.+||.+||..||.+|+ +++++++|||+.+
T Consensus 195 ~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 272 (332)
T cd05614 195 ILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKG 272 (332)
T ss_pred hhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 35788999999985311 111 11278999999999999999 8899999999964
No 104
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=98.38 E-value=5.1e-07 Score=60.71 Aligned_cols=28 Identities=50% Similarity=0.729 Sum_probs=26.9
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+.++|.+||..||.+|||+.+++.||||
T Consensus 284 ~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 284 GLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred HHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 6799999999999999999999999997
No 105
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=98.38 E-value=3.2e-07 Score=60.91 Aligned_cols=29 Identities=38% Similarity=0.651 Sum_probs=27.3
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
.+.++|.+||..||.+||++.+++.||||
T Consensus 259 ~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 259 EGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred HHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 36899999999999999999999999997
No 106
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=98.38 E-value=5.2e-07 Score=60.63 Aligned_cols=28 Identities=46% Similarity=0.786 Sum_probs=26.7
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+.+||.+||..||.+||++++++.||||
T Consensus 283 ~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 283 ALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred HHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 5689999999999999999999999997
No 107
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=98.38 E-value=5.8e-07 Score=59.17 Aligned_cols=32 Identities=28% Similarity=0.532 Sum_probs=29.8
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCcccccC
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFILEK 83 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~~ 83 (84)
++.++|.+|+..||.+||++.+++.||||+.+
T Consensus 232 ~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 232 DFQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred HHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 38899999999999999999999999999864
No 108
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=98.37 E-value=1.7e-07 Score=61.76 Aligned_cols=50 Identities=18% Similarity=0.234 Sum_probs=39.4
Q ss_pred hhhhhcCCCCCChhHH----H-----------------HHHHHHHHHHHHhccCcCCCCCHHHHhcCcccc
Q psy17425 32 LHSELVGNQHLPDDQA----R-----------------KVLQLKDLLDKILMLDTSKRLPINQALTHPFIL 81 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~----~-----------------~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~ 81 (84)
++++++|..||...+. . ....+.+++.+||..+|.+||++.++++||||+
T Consensus 198 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 198 IIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred HHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 6778889888864221 0 112378999999999999999999999999984
No 109
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=98.37 E-value=4.6e-07 Score=62.14 Aligned_cols=31 Identities=29% Similarity=0.512 Sum_probs=29.1
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCcccccC
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILEK 83 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~~ 83 (84)
+.++|.+||..+|.+|+++++++.||||...
T Consensus 289 ~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~ 319 (335)
T PTZ00024 289 AIDLLQSLLKLNPLERISAKEALKHEYFKSD 319 (335)
T ss_pred HHHHHHHHcCCCchhccCHHHHhcCcccCCC
Confidence 7899999999999999999999999999753
No 110
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=98.37 E-value=6e-07 Score=59.71 Aligned_cols=30 Identities=43% Similarity=0.705 Sum_probs=28.1
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCcccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFIL 81 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~ 81 (84)
.+.+||++||..||.+||++++++.||||.
T Consensus 257 ~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 257 EALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred HHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 478999999999999999999999999984
No 111
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=98.37 E-value=2.1e-07 Score=63.37 Aligned_cols=31 Identities=29% Similarity=0.573 Sum_probs=28.8
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
.+++|+.+||..||.+||++.+++.|||+..
T Consensus 262 ~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~ 292 (308)
T cd06615 262 EFQDFVDKCLKKNPKERADLKELTKHPFIKR 292 (308)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcChhhhh
Confidence 3789999999999999999999999999864
No 112
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=98.37 E-value=2.3e-07 Score=61.82 Aligned_cols=29 Identities=31% Similarity=0.669 Sum_probs=27.4
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
.+++||.+||..||.+|||+.+++.||||
T Consensus 256 ~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 256 TGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred HHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 36899999999999999999999999997
No 113
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=98.36 E-value=4e-07 Score=62.47 Aligned_cols=31 Identities=26% Similarity=0.449 Sum_probs=28.8
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
.+++||.+||..||.+|||+.+++.||||..
T Consensus 283 ~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~ 313 (328)
T cd08226 283 AFQNLVELCLQQDPEKRPSASSLLSHAFFKQ 313 (328)
T ss_pred HHHHHHHHHccCCcccCCCHHHHhhCHHHHH
Confidence 4789999999999999999999999999853
No 114
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=98.36 E-value=3e-07 Score=60.18 Aligned_cols=49 Identities=22% Similarity=0.291 Sum_probs=39.0
Q ss_pred hhhhhcCCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 32 LHSELVGNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
++++++|..||...+.... ..+.+++.+|+..||.+||++.+++.|||+
T Consensus 191 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 191 LYELASLKRAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred HHHHHhCCCCcccCchHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 5777788888865432211 138899999999999999999999999996
No 115
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=98.36 E-value=5.5e-07 Score=60.02 Aligned_cols=51 Identities=20% Similarity=0.263 Sum_probs=41.4
Q ss_pred hhhhhcCCCCCChhHHHH-------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQARK-------------------VLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~-------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+|++++|..||.+.+... ...+.++|.+||..+|.+||++.++++|||+..
T Consensus 198 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 267 (280)
T cd06611 198 LIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSD 267 (280)
T ss_pred HHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcc
Confidence 677888998886543221 123889999999999999999999999999975
No 116
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=98.36 E-value=2.4e-07 Score=62.32 Aligned_cols=51 Identities=22% Similarity=0.435 Sum_probs=40.8
Q ss_pred hhhhhcCCCCCChhHHHH-------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQARK-------------------VLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~-------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+|++++|..||...+... ...+.+++.+||..+|.+||++.+++.|+|+..
T Consensus 205 l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 274 (285)
T cd06648 205 VIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAK 274 (285)
T ss_pred HHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCccccc
Confidence 677888988876533211 123889999999999999999999999999964
No 117
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=98.36 E-value=1.4e-07 Score=63.28 Aligned_cols=52 Identities=17% Similarity=0.268 Sum_probs=40.2
Q ss_pred hhhhhhcCCCCCChhHH----HH-----------------HHHHHHHHHHHhccCcCCCCCH----HHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQA----RK-----------------VLQLKDLLDKILMLDTSKRLPI----NQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~----~~-----------------~~~~~~Ll~~~L~~dp~~R~s~----~~~l~hp~~~~ 82 (84)
.+|++++|..||.+... .. ..++++||++||..||.+|+++ ++++.|+||..
T Consensus 183 ~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~ 259 (277)
T cd05607 183 SIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKT 259 (277)
T ss_pred HHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcC
Confidence 47888999999864211 00 1227999999999999999999 77889999964
No 118
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=98.36 E-value=6e-07 Score=59.82 Aligned_cols=29 Identities=41% Similarity=0.710 Sum_probs=27.4
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
.+.++|.+||..||.+||++.+++.||||
T Consensus 255 ~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 255 DGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred HHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 37889999999999999999999999997
No 119
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.36 E-value=2.4e-07 Score=62.79 Aligned_cols=51 Identities=22% Similarity=0.365 Sum_probs=41.0
Q ss_pred hhhhhcCCCCCChhHHHH-------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQARK-------------------VLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~-------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+|++++|..||...+... ...+.++|.+||..||.+||++.+++.|||+..
T Consensus 205 l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~ 274 (296)
T cd06655 205 AIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKL 274 (296)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhh
Confidence 678889999987543211 112789999999999999999999999999964
No 120
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=98.36 E-value=2.5e-07 Score=61.00 Aligned_cols=49 Identities=22% Similarity=0.243 Sum_probs=38.4
Q ss_pred hhhhhcCCCCCChhHHH-----------------HHHHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 32 LHSELVGNQHLPDDQAR-----------------KVLQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~-----------------~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
++++++|..||.+.... ...++.++|.+|+..||.+||++.+++.|||+
T Consensus 195 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 195 LYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred HHHHHhCCCCCCCccHHHHHHHHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 56677788777643221 11248899999999999999999999999996
No 121
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=98.35 E-value=6.8e-07 Score=59.25 Aligned_cols=29 Identities=45% Similarity=0.738 Sum_probs=27.6
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
++.++|.+||..||.+||++.+++.|||+
T Consensus 255 ~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 255 QALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred HHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 47899999999999999999999999996
No 122
>KOG4717|consensus
Probab=98.35 E-value=3.7e-07 Score=68.23 Aligned_cols=78 Identities=13% Similarity=0.172 Sum_probs=53.7
Q ss_pred ceeeeeecCCCCCceE-EEecccCCCchhhhhhcCCCCCChhHHHHHH----------------HHHHHHHHHhccCcCC
Q psy17425 5 SFKIINFHFPPSQEKI-VTMSTIHPTRDLHSELVGNQHLPDDQARKVL----------------QLKDLLDKILMLDTSK 67 (84)
Q Consensus 5 ~f~~~~~d~~~~~~~~-~~~~~~~p~~~L~~~l~g~~p~~~~~~~~~~----------------~~~~Ll~~~L~~dp~~ 67 (84)
+.-|..++.+.|...- .-+..++-..-||-++||.+||..++..+.. +++|||..||++||++
T Consensus 181 SLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPshvS~eCrdLI~sMLvRdPkk 260 (864)
T KOG4717|consen 181 SLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSHVSKECRDLIQSMLVRDPKK 260 (864)
T ss_pred hhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchhhhHHHHHHHHHHHhcCchh
Confidence 3344445544444221 1122223333478888999999876544332 2999999999999999
Q ss_pred CCCHHHHhcCccccc
Q psy17425 68 RLPINQALTHPFILE 82 (84)
Q Consensus 68 R~s~~~~l~hp~~~~ 82 (84)
|.+.++|..++|++.
T Consensus 261 RAslEeI~s~~Wlq~ 275 (864)
T KOG4717|consen 261 RASLEEIVSTSWLQA 275 (864)
T ss_pred hccHHHHhccccccC
Confidence 999999999999974
No 123
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=98.35 E-value=3.5e-07 Score=59.81 Aligned_cols=49 Identities=24% Similarity=0.302 Sum_probs=39.8
Q ss_pred hhhhhcCCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 32 LHSELVGNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
++++++|..||...+.... ..+.++|++|+..+|++||++.+++.|||+
T Consensus 191 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 191 LYECCTGKHPFDANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 6778889989875443221 238999999999999999999999999995
No 124
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=98.35 E-value=4.7e-07 Score=62.47 Aligned_cols=54 Identities=17% Similarity=0.240 Sum_probs=40.5
Q ss_pred CchhhhhhcCCCCCCh--------h-HHHH----------------HHHHHHHHHHHhccCcCCCCC------HHHHhcC
Q psy17425 29 TRDLHSELVGNQHLPD--------D-QARK----------------VLQLKDLLDKILMLDTSKRLP------INQALTH 77 (84)
Q Consensus 29 ~~~L~~~l~g~~p~~~--------~-~~~~----------------~~~~~~Ll~~~L~~dp~~R~s------~~~~l~h 77 (84)
...+|++++|..||.. . .... ...+++||++||..||.+|++ ..+++.|
T Consensus 183 G~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 183 GVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred cHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 3458889999999841 0 0000 112789999999999999998 4799999
Q ss_pred ccccc
Q psy17425 78 PFILE 82 (84)
Q Consensus 78 p~~~~ 82 (84)
|||..
T Consensus 263 p~f~~ 267 (329)
T cd05618 263 PFFRN 267 (329)
T ss_pred CCCCC
Confidence 99964
No 125
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=98.35 E-value=4.9e-07 Score=62.73 Aligned_cols=78 Identities=18% Similarity=0.162 Sum_probs=53.6
Q ss_pred cceeeeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHH--------------------HHHHHHHHHHHhcc
Q psy17425 4 ISFKIINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARK--------------------VLQLKDLLDKILML 63 (84)
Q Consensus 4 ~~f~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~--------------------~~~~~~Ll~~~L~~ 63 (84)
|...+..++.+.+.........++-...+|++++|..||.+.+... ...+++||++||.
T Consensus 201 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~- 279 (364)
T cd05599 201 GTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC- 279 (364)
T ss_pred cCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-
Confidence 3444555555544443333334444456899999999997643321 1238999999996
Q ss_pred CcCCCCC---HHHHhcCccccc
Q psy17425 64 DTSKRLP---INQALTHPFILE 82 (84)
Q Consensus 64 dp~~R~s---~~~~l~hp~~~~ 82 (84)
+|.+|++ +.+++.|||++.
T Consensus 280 ~p~~R~~~~~~~~ll~h~~~~~ 301 (364)
T cd05599 280 EAERRLGNNGVNEIKSHPFFKG 301 (364)
T ss_pred CHhhcCCCCCHHHHhcCCCcCC
Confidence 9999998 999999999964
No 126
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=98.34 E-value=6.4e-07 Score=60.19 Aligned_cols=32 Identities=38% Similarity=0.684 Sum_probs=29.4
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCcccccC
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFILEK 83 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~~ 83 (84)
.+.++|.+||..||.+|+|+.+++.|+||++.
T Consensus 257 ~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~ 288 (298)
T cd07841 257 DALDLLQRLLTLNPNKRITARQALEHPYFSND 288 (298)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhhCccccCC
Confidence 37789999999999999999999999999763
No 127
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=98.34 E-value=2e-07 Score=62.25 Aligned_cols=51 Identities=24% Similarity=0.233 Sum_probs=41.1
Q ss_pred hhhhhcCCCCCChhHHH-----------------HHHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQAR-----------------KVLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~-----------------~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+|++++|..||.+.... ....+.+++.+||..+|.+||++.+++.|+|+..
T Consensus 191 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 258 (277)
T cd06640 191 AIELAKGEPPNSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVK 258 (277)
T ss_pred HHHHHHCCCCCCCcChHhHhhhhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhh
Confidence 67888999888643221 1223789999999999999999999999999864
No 128
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=98.34 E-value=4.3e-07 Score=62.56 Aligned_cols=54 Identities=17% Similarity=0.246 Sum_probs=40.7
Q ss_pred CchhhhhhcCCCCCChh---------HHHHH----------------HHHHHHHHHHhccCcCCCCC------HHHHhcC
Q psy17425 29 TRDLHSELVGNQHLPDD---------QARKV----------------LQLKDLLDKILMLDTSKRLP------INQALTH 77 (84)
Q Consensus 29 ~~~L~~~l~g~~p~~~~---------~~~~~----------------~~~~~Ll~~~L~~dp~~R~s------~~~~l~h 77 (84)
...+|++++|..||... ..... ..+.+||++||..||.+|++ +.+++.|
T Consensus 183 G~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 183 GVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred HHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 34578899999998521 00011 12789999999999999987 7899999
Q ss_pred ccccc
Q psy17425 78 PFILE 82 (84)
Q Consensus 78 p~~~~ 82 (84)
|||..
T Consensus 263 p~~~~ 267 (329)
T cd05588 263 PFFRN 267 (329)
T ss_pred CCCCC
Confidence 99963
No 129
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=98.33 E-value=4.1e-07 Score=61.18 Aligned_cols=52 Identities=29% Similarity=0.454 Sum_probs=41.5
Q ss_pred hhhhhhcCCCCCChhHHHHH----------------HHHHHHHHHHhccCcCCCC-----CHHHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQARKV----------------LQLKDLLDKILMLDTSKRL-----PINQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~~----------------~~~~~Ll~~~L~~dp~~R~-----s~~~~l~hp~~~~ 82 (84)
.+|++++|..||...+.... ..++++|++||..||.+|+ ++++++.|||+..
T Consensus 187 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~ 259 (290)
T cd05580 187 LIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAG 259 (290)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCccccc
Confidence 36788899999865433221 1288999999999999999 8999999999854
No 130
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=98.33 E-value=1.9e-07 Score=63.20 Aligned_cols=51 Identities=22% Similarity=0.355 Sum_probs=40.9
Q ss_pred hhhhhcCCCCCChhHHHH-------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQARK-------------------VLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~-------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+|++++|+.||...+... ...+.+++.+|+..||.+|||+.+++.|||+..
T Consensus 208 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~ 277 (292)
T cd06658 208 VIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKL 277 (292)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhc
Confidence 778889998886533211 112789999999999999999999999999964
No 131
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=98.33 E-value=3.9e-07 Score=60.10 Aligned_cols=52 Identities=23% Similarity=0.337 Sum_probs=41.3
Q ss_pred hhhhhhcCCCCCChhH--HHH----H--------------HHHHHHHHHHhccCcCCCCC-----HHHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQ--ARK----V--------------LQLKDLLDKILMLDTSKRLP-----INQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~--~~~----~--------------~~~~~Ll~~~L~~dp~~R~s-----~~~~l~hp~~~~ 82 (84)
.+|++++|..||.... ... . ..++++|.+||..+|.+|++ +.+++.||||.+
T Consensus 181 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~ 257 (262)
T cd05572 181 LLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNG 257 (262)
T ss_pred HHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhC
Confidence 3677888998886543 111 1 23789999999999999999 999999999975
No 132
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.33 E-value=2.6e-07 Score=61.86 Aligned_cols=31 Identities=26% Similarity=0.439 Sum_probs=28.5
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
.+.+||.+|+..||.+||++.++++|+|+.+
T Consensus 241 ~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 241 DLRDFVDACLLKDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 3789999999999999999999999999854
No 133
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=98.33 E-value=3.2e-07 Score=62.91 Aligned_cols=52 Identities=27% Similarity=0.427 Sum_probs=41.2
Q ss_pred hhhhhhcCCCCCChhHHHHH----------------HHHHHHHHHHhccCcCCCCCH-HHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQARKV----------------LQLKDLLDKILMLDTSKRLPI-NQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~~----------------~~~~~Ll~~~L~~dp~~R~s~-~~~l~hp~~~~ 82 (84)
.+|++++|..||...+.... ..+.+||++||..||.+|+++ .+++.|||+..
T Consensus 185 il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~ 253 (316)
T cd05592 185 LLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRG 253 (316)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCC
Confidence 47889999999976443322 237899999999999999986 57889999864
No 134
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.33 E-value=7.6e-07 Score=59.48 Aligned_cols=51 Identities=20% Similarity=0.311 Sum_probs=40.7
Q ss_pred hhhhhcCCCCCChhHHHH--------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQARK--------------------VLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~--------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+|++++|..||....... ..++.++|.+||..+|.+||++.+++.|||+..
T Consensus 197 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~ 267 (286)
T cd06622 197 ILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVK 267 (286)
T ss_pred HHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhh
Confidence 678889999986432211 123789999999999999999999999999854
No 135
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=98.33 E-value=7.9e-07 Score=59.39 Aligned_cols=51 Identities=24% Similarity=0.259 Sum_probs=40.8
Q ss_pred hhhhhcCCCCCChhHHHH-------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQARK-------------------VLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~-------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+|+++.|.+||...+... ...+.+||.+||..||.+||++.+++.|||+..
T Consensus 198 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 267 (282)
T cd06643 198 LIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTV 267 (282)
T ss_pred HHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEec
Confidence 677778888886532211 123899999999999999999999999999964
No 136
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=98.33 E-value=2.3e-07 Score=59.94 Aligned_cols=48 Identities=29% Similarity=0.337 Sum_probs=38.7
Q ss_pred hhhhhcCCCCCChhHHHH-------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCcc
Q psy17425 32 LHSELVGNQHLPDDQARK-------------------VLQLKDLLDKILMLDTSKRLPINQALTHPF 79 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~-------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~ 79 (84)
+|+++.|..||...+... ...+.++|.+||..||.+||++.+++.|||
T Consensus 187 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 187 AIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred HHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 577888988887651111 233799999999999999999999999998
No 137
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=98.32 E-value=7.3e-07 Score=62.62 Aligned_cols=52 Identities=27% Similarity=0.303 Sum_probs=42.4
Q ss_pred hhhhhhcCCCCCChhHHHH--------------------HHHHHHHHHHHhccCcCC--CCCHHHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQARK--------------------VLQLKDLLDKILMLDTSK--RLPINQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~--------------------~~~~~~Ll~~~L~~dp~~--R~s~~~~l~hp~~~~ 82 (84)
.+|++++|..||.+.+... ..++++||++||..+|.+ |+++.+++.|||++.
T Consensus 236 ilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~ 309 (370)
T cd05596 236 FLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKN 309 (370)
T ss_pred HHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCC
Confidence 4788999999997643321 123899999999999988 999999999999964
No 138
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=98.32 E-value=3e-07 Score=63.24 Aligned_cols=31 Identities=39% Similarity=0.768 Sum_probs=28.8
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
.+.++|++||..||.+||++.+++.|||+.+
T Consensus 269 ~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~ 299 (334)
T cd07855 269 EALDLLSQMLQFDPEERITVEQALQHPFLAQ 299 (334)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHhChhhhh
Confidence 4789999999999999999999999999954
No 139
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=98.32 E-value=5.5e-07 Score=61.96 Aligned_cols=30 Identities=40% Similarity=0.791 Sum_probs=28.4
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+.+||.+||..||.+||++.+++.|||+..
T Consensus 268 ~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~ 297 (336)
T cd07849 268 ALDLLDKMLTFNPHKRITVEEALAHPYLEQ 297 (336)
T ss_pred HHHHHHHHcCCChhhCcCHHHHhcCccccc
Confidence 679999999999999999999999999965
No 140
>KOG0616|consensus
Probab=98.31 E-value=1.5e-07 Score=65.86 Aligned_cols=52 Identities=29% Similarity=0.469 Sum_probs=46.0
Q ss_pred hhhhhhcCCCCCChhHHHHHHH----------------HHHHHHHHhccCcCCCC-----CHHHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQARKVLQ----------------LKDLLDKILMLDTSKRL-----PINQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~~~~----------------~~~Ll~~~L~~dp~~R~-----s~~~~l~hp~~~~ 82 (84)
-+|+|++|.+||.+++...+++ +++||+++|++|-.+|. ...++.+||||++
T Consensus 230 LIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~ 302 (355)
T KOG0616|consen 230 LIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKG 302 (355)
T ss_pred HHHHHHcCCCCCcCCChHHHHHHHHhCcccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccc
Confidence 3799999999999988877775 99999999999999994 5678999999974
No 141
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.31 E-value=3.2e-07 Score=62.13 Aligned_cols=51 Identities=20% Similarity=0.322 Sum_probs=41.1
Q ss_pred hhhhhcCCCCCChhHHHH-------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQARK-------------------VLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~-------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+|++++|..||..++... ...+.+++.+||..||..||++.+++.|||+..
T Consensus 206 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~ 275 (296)
T cd06654 206 AIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275 (296)
T ss_pred HHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhc
Confidence 678889999986543211 122889999999999999999999999999853
No 142
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=98.31 E-value=2.1e-07 Score=70.29 Aligned_cols=78 Identities=14% Similarity=0.187 Sum_probs=51.9
Q ss_pred ceeeeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHHHH-------------------HHHHHHHHHhccCc
Q psy17425 5 SFKIINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARKVL-------------------QLKDLLDKILMLDT 65 (84)
Q Consensus 5 ~f~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~~~-------------------~~~~Ll~~~L~~dp 65 (84)
...|..++.+.+.........+.-...||++++|..||......... .+.+++.+||..||
T Consensus 543 T~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~~dP 622 (669)
T cd05610 543 TPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLTMDP 622 (669)
T ss_pred CccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccCh
Confidence 33444555544443322222223333478899999999764332211 26789999999999
Q ss_pred CCCCCHHHHhcCccccc
Q psy17425 66 SKRLPINQALTHPFILE 82 (84)
Q Consensus 66 ~~R~s~~~~l~hp~~~~ 82 (84)
.+|+++.+++.|||+..
T Consensus 623 ~~R~ta~e~l~h~~~~~ 639 (669)
T cd05610 623 TKRAGLKELKQHPLFHG 639 (669)
T ss_pred hHCcCHHHHHhCHhhcC
Confidence 99999999999999864
No 143
>KOG0582|consensus
Probab=98.30 E-value=6.4e-07 Score=65.41 Aligned_cols=58 Identities=19% Similarity=0.257 Sum_probs=43.6
Q ss_pred ccCCCchhhhhhcCCCCCCh-------hHHHHHHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 25 TIHPTRDLHSELVGNQHLPD-------DQARKVLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 25 ~~~p~~~L~~~l~g~~p~~~-------~~~~~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
..+|.+.|...+.|.+|... .+.+....++.+|..||+.||.+|||++++++|+||+.
T Consensus 234 k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~ 298 (516)
T KOG0582|consen 234 KYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKK 298 (516)
T ss_pred cCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhh
Confidence 35566666666777766321 22233345999999999999999999999999999964
No 144
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=98.30 E-value=7.8e-07 Score=59.24 Aligned_cols=28 Identities=32% Similarity=0.472 Sum_probs=27.1
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+++|+.+||..+|.+||++.+++.|+||
T Consensus 259 ~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 259 VLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred HHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 7899999999999999999999999997
No 145
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=98.29 E-value=9.7e-07 Score=61.03 Aligned_cols=30 Identities=47% Similarity=0.722 Sum_probs=28.3
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+.+||++||..||.+|+++.+++.||||.+
T Consensus 273 ~~~li~~~l~~dP~~R~~~~e~l~h~~f~~ 302 (342)
T cd07879 273 AVDLLEKMLELDVDKRLTATEALEHPYFDS 302 (342)
T ss_pred HHHHHHHHcCCChhhCcCHHHHhcCcchhh
Confidence 679999999999999999999999999964
No 146
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=98.29 E-value=1.1e-06 Score=60.84 Aligned_cols=30 Identities=33% Similarity=0.610 Sum_probs=28.2
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+++||.+||..||.+||++.+++.|||++.
T Consensus 276 ~~~li~~~L~~dP~~R~t~~ell~h~~~~~ 305 (342)
T cd07854 276 ALDFLEQILTFNPMDRLTAEEALMHPYMSC 305 (342)
T ss_pred HHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence 678999999999999999999999999963
No 147
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=98.29 E-value=4.2e-07 Score=62.38 Aligned_cols=54 Identities=20% Similarity=0.232 Sum_probs=42.5
Q ss_pred CchhhhhhcCCCCCChhHHHHHH----------------HHHHHHHHHhccCcCCCCCH----HHHhcCccccc
Q psy17425 29 TRDLHSELVGNQHLPDDQARKVL----------------QLKDLLDKILMLDTSKRLPI----NQALTHPFILE 82 (84)
Q Consensus 29 ~~~L~~~l~g~~p~~~~~~~~~~----------------~~~~Ll~~~L~~dp~~R~s~----~~~l~hp~~~~ 82 (84)
...+|++++|..||...+..... .+.++|++||..||.+|+++ .+++.||||..
T Consensus 183 G~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~ 256 (325)
T cd05604 183 GAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFES 256 (325)
T ss_pred cceehhhhcCCCCCCCCCHHHHHHHHHcCCccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCC
Confidence 34578899999999765433222 27899999999999999976 58999999964
No 148
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=98.29 E-value=3.1e-07 Score=61.44 Aligned_cols=31 Identities=16% Similarity=0.432 Sum_probs=28.9
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
++.+++.+||..||.+||++.+++.|||+..
T Consensus 228 ~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~ 258 (279)
T cd06619 228 KFVHFITQCMRKQPKERPAPENLMDHPFIVQ 258 (279)
T ss_pred HHHHHHHHHhhCChhhCCCHHHHhcCccccc
Confidence 4889999999999999999999999999864
No 149
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=98.29 E-value=6.6e-07 Score=58.77 Aligned_cols=50 Identities=26% Similarity=0.356 Sum_probs=39.0
Q ss_pred hhhhhhcCCCCCChhHH--HH------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 31 DLHSELVGNQHLPDDQA--RK------------------VLQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~--~~------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
.+++++.|..||...+. .. ...+.+||++|+..+|.+||++.+++.|||+
T Consensus 195 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 195 VVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred HHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 36778889888864311 10 1236899999999999999999999999996
No 150
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=98.28 E-value=9.6e-07 Score=59.05 Aligned_cols=51 Identities=25% Similarity=0.346 Sum_probs=40.3
Q ss_pred hhhhhcCCCCCChhHH--H--------------------HHHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQA--R--------------------KVLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~--~--------------------~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+|++++|..||...+. . ...++.+||++||..||.+||++++++.|||+..
T Consensus 200 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 272 (288)
T cd06616 200 LYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD 272 (288)
T ss_pred HHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence 5778889888864321 0 1123789999999999999999999999999965
No 151
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=98.28 E-value=4.5e-07 Score=61.48 Aligned_cols=51 Identities=25% Similarity=0.438 Sum_probs=40.3
Q ss_pred hhhhhcCCCCCChhHHHH-------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQARK-------------------VLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~-------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+|++++|..||...+... ...+.+++.+||..||.+|+++.+++.|||+..
T Consensus 206 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~ 275 (292)
T cd06657 206 VIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 275 (292)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhc
Confidence 677888988886432211 123789999999999999999999999999864
No 152
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=98.28 E-value=1.3e-06 Score=57.92 Aligned_cols=49 Identities=22% Similarity=0.396 Sum_probs=38.8
Q ss_pred hhhhhcCCCCCChhHHHH----------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 32 LHSELVGNQHLPDDQARK----------------------VLQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~----------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
++++++|..||...+... ...+.++|.+|+..+|.+||++++++.|||+
T Consensus 202 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 202 VLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred HHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 567778888886432210 1248999999999999999999999999996
No 153
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=98.28 E-value=3.9e-07 Score=62.23 Aligned_cols=30 Identities=40% Similarity=0.813 Sum_probs=28.2
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+.+||.+||..+|.+||++.+++.||||..
T Consensus 265 ~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~ 294 (330)
T cd07834 265 AIDLLEKMLVFDPKKRITADEALAHPYLAQ 294 (330)
T ss_pred HHHHHHHHccCChhhCCCHHHHHhCccHHh
Confidence 679999999999999999999999999964
No 154
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=98.28 E-value=4.8e-07 Score=58.99 Aligned_cols=49 Identities=27% Similarity=0.483 Sum_probs=39.6
Q ss_pred hhhhhcCCCCCChhHHHHH----------------HHHHHHHHHHhccCcCCCCCH---HHHhcCccc
Q psy17425 32 LHSELVGNQHLPDDQARKV----------------LQLKDLLDKILMLDTSKRLPI---NQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~~----------------~~~~~Ll~~~L~~dp~~R~s~---~~~l~hp~~ 80 (84)
+|++++|..||...+.... ..+.++|++||..||++||++ .+++.||||
T Consensus 183 ~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 183 LYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 5778889888865442221 127999999999999999999 999999997
No 155
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=98.28 E-value=1.4e-06 Score=57.74 Aligned_cols=29 Identities=38% Similarity=0.684 Sum_probs=27.7
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
.+.++|++||..||.+||++.+++.||||
T Consensus 254 ~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 254 EGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred HHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 48999999999999999999999999997
No 156
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=98.27 E-value=1.6e-06 Score=58.15 Aligned_cols=29 Identities=31% Similarity=0.624 Sum_probs=27.4
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
.+.+++.+||..||.+|||+.+++.||||
T Consensus 263 ~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 263 KAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred HHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 37799999999999999999999999997
No 157
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=98.27 E-value=9.3e-07 Score=62.07 Aligned_cols=79 Identities=16% Similarity=0.070 Sum_probs=52.0
Q ss_pred cceeeeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHH--------------------HHHHHHHHHHHhcc
Q psy17425 4 ISFKIINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARK--------------------VLQLKDLLDKILML 63 (84)
Q Consensus 4 ~~f~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~--------------------~~~~~~Ll~~~L~~ 63 (84)
|...+..++.+.+.........++-...+|++++|..||...+... ..++++||.+|+..
T Consensus 210 gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~ 289 (381)
T cd05626 210 GTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCS 289 (381)
T ss_pred CCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccC
Confidence 4445556665555443333344444456899999999996533221 12388999996654
Q ss_pred --CcCCCCCHHHHhcCccccc
Q psy17425 64 --DTSKRLPINQALTHPFILE 82 (84)
Q Consensus 64 --dp~~R~s~~~~l~hp~~~~ 82 (84)
++..|+++.+++.||||.+
T Consensus 290 ~~~~~~R~~~~~~l~hp~f~~ 310 (381)
T cd05626 290 AEERLGRNGADDIKAHPFFSE 310 (381)
T ss_pred cccccCCCCHHHHhcCcccCC
Confidence 4445999999999999964
No 158
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=98.27 E-value=9e-07 Score=59.42 Aligned_cols=28 Identities=39% Similarity=0.718 Sum_probs=27.0
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+.++|++||..||++|||+.+++.||||
T Consensus 266 ~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 266 GFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred HHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 6799999999999999999999999997
No 159
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=98.27 E-value=5.3e-07 Score=59.99 Aligned_cols=29 Identities=31% Similarity=0.592 Sum_probs=27.6
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
++++||++||..+|.+||++++++.||||
T Consensus 260 ~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 260 PALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred HHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 47899999999999999999999999997
No 160
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=98.27 E-value=6.2e-07 Score=60.49 Aligned_cols=28 Identities=43% Similarity=0.686 Sum_probs=27.0
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+.++|.+||..||++|||+.+++.||||
T Consensus 289 ~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 289 GFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred HHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 7789999999999999999999999997
No 161
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=98.27 E-value=8.9e-07 Score=61.93 Aligned_cols=78 Identities=13% Similarity=0.113 Sum_probs=52.9
Q ss_pred cceeeeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHH--------------------HHHHHHHHHHHhcc
Q psy17425 4 ISFKIINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARK--------------------VLQLKDLLDKILML 63 (84)
Q Consensus 4 ~~f~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~--------------------~~~~~~Ll~~~L~~ 63 (84)
|...+..++.+.+.........++-...+|++++|..||...+... ..++++||++||.
T Consensus 210 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~- 288 (377)
T cd05629 210 GTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT- 288 (377)
T ss_pred CCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-
Confidence 4555666665555544333344444456899999999996533221 1237899999997
Q ss_pred CcCCC---CCHHHHhcCccccc
Q psy17425 64 DTSKR---LPINQALTHPFILE 82 (84)
Q Consensus 64 dp~~R---~s~~~~l~hp~~~~ 82 (84)
+|.+| +++.+++.|||+.+
T Consensus 289 ~~~~r~~r~~~~~~l~hp~~~~ 310 (377)
T cd05629 289 NAENRLGRGGAHEIKSHPFFRG 310 (377)
T ss_pred CHhhcCCCCCHHHHhcCCCcCC
Confidence 77775 59999999999964
No 162
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=98.27 E-value=1.4e-06 Score=59.50 Aligned_cols=51 Identities=16% Similarity=0.090 Sum_probs=40.6
Q ss_pred hhhhhcCCCCCChhHHHH------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQARK------------------VLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+|++++|..||.+.+... ...+++|+.+||..+|.+||++.+++.|||+..
T Consensus 210 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~ 278 (313)
T cd06633 210 CIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRR 278 (313)
T ss_pred HHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCC
Confidence 677888888886533211 113899999999999999999999999999965
No 163
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=98.26 E-value=8.1e-07 Score=62.06 Aligned_cols=78 Identities=17% Similarity=0.100 Sum_probs=53.4
Q ss_pred cceeeeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHHH--------------------HHHHHHHHHHhcc
Q psy17425 4 ISFKIINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARKV--------------------LQLKDLLDKILML 63 (84)
Q Consensus 4 ~~f~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~~--------------------~~~~~Ll~~~L~~ 63 (84)
|...+..++.+.+.........++-...+|++++|..||...+.... ..+.+||.+|+ .
T Consensus 206 gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~ 284 (376)
T cd05598 206 GTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-C 284 (376)
T ss_pred CCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-c
Confidence 44445555555554443333444444568889999999975443211 13889999976 6
Q ss_pred CcCCCC---CHHHHhcCccccc
Q psy17425 64 DTSKRL---PINQALTHPFILE 82 (84)
Q Consensus 64 dp~~R~---s~~~~l~hp~~~~ 82 (84)
+|.+|+ ++.+++.|||+..
T Consensus 285 ~p~~R~~~~t~~ell~h~~~~~ 306 (376)
T cd05598 285 GAEDRLGKNGADEIKAHPFFKG 306 (376)
T ss_pred CHhhcCCCCCHHHHhCCCCcCC
Confidence 999999 9999999999964
No 164
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=98.26 E-value=3e-07 Score=61.42 Aligned_cols=52 Identities=23% Similarity=0.374 Sum_probs=40.6
Q ss_pred hhhhhhcCCCCCChhHH----H----------------HHHHHHHHHHHHhccCcCCCC-----CHHHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQA----R----------------KVLQLKDLLDKILMLDTSKRL-----PINQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~----~----------------~~~~~~~Ll~~~L~~dp~~R~-----s~~~~l~hp~~~~ 82 (84)
.+|++++|..||..... . ...++.++|++||..||.+|+ ++.+++.|||+..
T Consensus 183 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~ 259 (277)
T cd05577 183 TLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKD 259 (277)
T ss_pred HHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhc
Confidence 36788899999854321 1 112389999999999999999 8999999999953
No 165
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=98.26 E-value=9e-07 Score=58.90 Aligned_cols=28 Identities=36% Similarity=0.635 Sum_probs=26.9
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
++++|.+|+..||.+|+++.+++.||||
T Consensus 257 ~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 257 GIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred HHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 6799999999999999999999999997
No 166
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=98.26 E-value=5.1e-07 Score=62.21 Aligned_cols=30 Identities=43% Similarity=0.848 Sum_probs=28.2
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+.+||.+||..||.+|||+.+++.|||+..
T Consensus 267 ~~~li~~~l~~~P~~Rps~~ell~h~~~~~ 296 (337)
T cd07858 267 AIDLLEKMLVFDPSKRITVEEALAHPYLAS 296 (337)
T ss_pred HHHHHHHHhcCChhhccCHHHHHcCcchhh
Confidence 679999999999999999999999999964
No 167
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=98.25 E-value=8.8e-07 Score=57.83 Aligned_cols=49 Identities=12% Similarity=0.205 Sum_probs=39.0
Q ss_pred hhhhhcCCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 32 LHSELVGNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
++++++|..||...+.... .+++++|.+||..+|.+||++.+++.||++
T Consensus 191 ~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 191 LYEMATFAPPFEARSMQDLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 5667788888865433211 238999999999999999999999999975
No 168
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=98.25 E-value=1.1e-06 Score=57.40 Aligned_cols=51 Identities=29% Similarity=0.404 Sum_probs=40.9
Q ss_pred hhhhhcCCCCCChhHHHH------------------HHHHHHHHHHHhccCcCCCCCH---HHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQARK------------------VLQLKDLLDKILMLDTSKRLPI---NQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~------------------~~~~~~Ll~~~L~~dp~~R~s~---~~~l~hp~~~~ 82 (84)
+|++++|..||....... ...+.+++++|+..+|.+||++ .+++.||||.+
T Consensus 191 ~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~ 262 (265)
T cd05579 191 LYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKG 262 (265)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccC
Confidence 566778888886543322 2348999999999999999999 99999999974
No 169
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=98.25 E-value=1.8e-06 Score=58.06 Aligned_cols=51 Identities=20% Similarity=0.246 Sum_probs=40.5
Q ss_pred hhhhhcCCCCCChhHHHH-------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQARK-------------------VLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~-------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+|++++|..||...+... ..++.++|.+||..||.+||++.+++.|||+..
T Consensus 205 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 274 (292)
T cd06644 205 LIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSS 274 (292)
T ss_pred HHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 677888988886533211 124789999999999999999999999999863
No 170
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=98.25 E-value=1.1e-06 Score=61.63 Aligned_cols=78 Identities=17% Similarity=0.073 Sum_probs=54.3
Q ss_pred cceeeeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHH--------------------HHHHHHHHHHHhcc
Q psy17425 4 ISFKIINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARK--------------------VLQLKDLLDKILML 63 (84)
Q Consensus 4 ~~f~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~--------------------~~~~~~Ll~~~L~~ 63 (84)
|...+..++.+.+.........++-...+|+|++|..||...+... ..++.+||.+|+ .
T Consensus 210 gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~ 288 (382)
T cd05625 210 GTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-R 288 (382)
T ss_pred cCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-c
Confidence 4445666666655544444444444556899999999997543221 123889999976 6
Q ss_pred CcCCCCC---HHHHhcCccccc
Q psy17425 64 DTSKRLP---INQALTHPFILE 82 (84)
Q Consensus 64 dp~~R~s---~~~~l~hp~~~~ 82 (84)
+|.+|++ +.+++.||||..
T Consensus 289 ~p~~R~~~~~~~ei~~hp~f~~ 310 (382)
T cd05625 289 GPEDRLGKNGADEIKAHPFFKT 310 (382)
T ss_pred CHhHcCCCCCHHHHhcCCCcCC
Confidence 9999997 999999999964
No 171
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=98.25 E-value=3.8e-07 Score=66.76 Aligned_cols=51 Identities=16% Similarity=0.246 Sum_probs=42.1
Q ss_pred hhhhhhcCCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhcCcccc
Q psy17425 31 DLHSELVGNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALTHPFIL 81 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~ 81 (84)
.+|++++|..||...+.... .++.+++.+||..||.+||++.++++|||++
T Consensus 234 ilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~ 301 (496)
T PTZ00283 234 LLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICK 301 (496)
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHH
Confidence 37888999999976544322 1389999999999999999999999999975
No 172
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=98.25 E-value=1.1e-06 Score=58.34 Aligned_cols=51 Identities=20% Similarity=0.227 Sum_probs=41.3
Q ss_pred hhhhhcCCCCCChhHHH------------------HHHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQAR------------------KVLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~------------------~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+|++++|..||.+.+.. ...++.+++.+||..||.+||++.+++.|+|++.
T Consensus 192 l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~ 260 (277)
T cd06917 192 IYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKA 260 (277)
T ss_pred HHHHHhCCCCCCCCChhhhhhccccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhc
Confidence 67788899888654321 1224899999999999999999999999999965
No 173
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=98.25 E-value=7.6e-07 Score=59.64 Aligned_cols=29 Identities=28% Similarity=0.533 Sum_probs=27.3
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
.+.++|.+||..||.+|||+.+++.||||
T Consensus 263 ~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 263 HGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred hHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 36799999999999999999999999997
No 174
>PHA03209 serine/threonine kinase US3; Provisional
Probab=98.24 E-value=7.8e-07 Score=62.04 Aligned_cols=30 Identities=23% Similarity=0.350 Sum_probs=27.9
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+.+||.+||..||.+|||+.++++||||+.
T Consensus 327 ~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 327 GEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred HHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 566999999999999999999999999974
No 175
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=98.24 E-value=7.1e-07 Score=57.86 Aligned_cols=49 Identities=27% Similarity=0.335 Sum_probs=39.0
Q ss_pred hhhhhcCCCCCChhH--HH-----------------HHHHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 32 LHSELVGNQHLPDDQ--AR-----------------KVLQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~~--~~-----------------~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+|++++|..||...+ .. ....++++|.+|+..||.+||++.+++.|||+
T Consensus 193 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 193 VIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred HHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 677888888886542 00 11238999999999999999999999999997
No 176
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=98.23 E-value=1.4e-06 Score=57.79 Aligned_cols=49 Identities=16% Similarity=0.249 Sum_probs=38.3
Q ss_pred hhhhhcCCCCCChhHH---H----------------HHHHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 32 LHSELVGNQHLPDDQA---R----------------KVLQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~---~----------------~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+|++++|..||..... . ....+.+|+++||..+|.+||++.+++.|||+
T Consensus 201 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 201 IVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred HHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 6778888888853211 0 01137899999999999999999999999996
No 177
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=98.23 E-value=3.2e-07 Score=61.18 Aligned_cols=51 Identities=20% Similarity=0.174 Sum_probs=40.0
Q ss_pred hhhhhcCCCCCChhHHH-----------------HHHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQAR-----------------KVLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~-----------------~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+|++++|..|+.+.... ....+.++|.+|+..+|.+||++.+++.|||+..
T Consensus 191 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 258 (277)
T cd06642 191 AIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITR 258 (277)
T ss_pred HHHHHhCCCCCcccchhhHHhhhhcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHH
Confidence 67788898887543211 1123789999999999999999999999999853
No 178
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=98.23 E-value=1e-06 Score=60.31 Aligned_cols=54 Identities=22% Similarity=0.193 Sum_probs=42.2
Q ss_pred CchhhhhhcCCCCCChhHHHHHH----------------HHHHHHHHHhccCcCCCCCH----HHHhcCccccc
Q psy17425 29 TRDLHSELVGNQHLPDDQARKVL----------------QLKDLLDKILMLDTSKRLPI----NQALTHPFILE 82 (84)
Q Consensus 29 ~~~L~~~l~g~~p~~~~~~~~~~----------------~~~~Ll~~~L~~dp~~R~s~----~~~l~hp~~~~ 82 (84)
..-+|++++|..||...+..... .+.++|.+||..||.+|+++ .+++.|+|+..
T Consensus 183 G~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~ 256 (321)
T cd05603 183 GAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSP 256 (321)
T ss_pred chhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCC
Confidence 34588999999999765433222 27899999999999999975 49999999853
No 179
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=98.23 E-value=9e-07 Score=60.00 Aligned_cols=52 Identities=25% Similarity=0.295 Sum_probs=40.5
Q ss_pred hhhhhhcCCCCCChhHHHH-------------------HHHHHHHHHHHhccCcCCCCC---HHHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQARK-------------------VLQLKDLLDKILMLDTSKRLP---INQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~-------------------~~~~~~Ll~~~L~~dp~~R~s---~~~~l~hp~~~~ 82 (84)
.+|++++|..||.+..... ...+.++|++|+..||.+|++ +.+++.|||+..
T Consensus 205 vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~ 278 (305)
T cd05609 205 ILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLG 278 (305)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccC
Confidence 3678889998886532221 122799999999999999997 799999999854
No 180
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=98.23 E-value=6.6e-07 Score=60.20 Aligned_cols=52 Identities=17% Similarity=0.279 Sum_probs=41.0
Q ss_pred hhhhhhcCCCCCChhHHHH--------------------HHHHHHHHHHHhccCcCCCCC-----HHHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQARK--------------------VLQLKDLLDKILMLDTSKRLP-----INQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~--------------------~~~~~~Ll~~~L~~dp~~R~s-----~~~~l~hp~~~~ 82 (84)
.+|++++|..||.+..... ...+.+|+.+||..||.+|++ +.+++.|+|+..
T Consensus 190 ~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~ 266 (285)
T cd05632 190 LIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRN 266 (285)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhc
Confidence 3678889999997532210 112899999999999999999 889999999964
No 181
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=98.22 E-value=1.1e-06 Score=57.49 Aligned_cols=49 Identities=24% Similarity=0.280 Sum_probs=38.5
Q ss_pred hhhhhcCCCCCChhHHHH------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 32 LHSELVGNQHLPDDQARK------------------VLQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+|++++|..||....... ...+++++.+|+..+|.+||++.+++.|||+
T Consensus 192 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 192 VLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred HHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 567888988885432111 1227899999999999999999999999996
No 182
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.22 E-value=2.1e-06 Score=57.67 Aligned_cols=31 Identities=29% Similarity=0.492 Sum_probs=28.7
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
.+.++|.+||..+|.+|||+.+++.|||+..
T Consensus 241 ~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~ 271 (287)
T cd06621 241 EFKDFIKQCLEKDPTRRPTPWDMLEHPWIKA 271 (287)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHhCccccc
Confidence 3789999999999999999999999999954
No 183
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=98.22 E-value=1.7e-06 Score=57.16 Aligned_cols=49 Identities=29% Similarity=0.520 Sum_probs=38.9
Q ss_pred hhhhhcCCCCCChhHHHHH----------------HHHHHHHHHHhccCcCCCCCH----HHHhcCccc
Q psy17425 32 LHSELVGNQHLPDDQARKV----------------LQLKDLLDKILMLDTSKRLPI----NQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~~----------------~~~~~Ll~~~L~~dp~~R~s~----~~~l~hp~~ 80 (84)
++++++|..||........ ..+.++|.+||..+|.+||++ .+++.||||
T Consensus 212 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 212 IYQMLTGKPPFRGSNEYLTFQKILKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHHHHhCCCCCCCccHHHHHHHHHhcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 5677788888865332111 137899999999999999999 999999997
No 184
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=98.21 E-value=9.4e-07 Score=60.75 Aligned_cols=52 Identities=17% Similarity=0.229 Sum_probs=41.6
Q ss_pred hhhhhhcCCCCCChhHHHHH----------------HHHHHHHHHHhccCcCCCCC-----HHHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQARKV----------------LQLKDLLDKILMLDTSKRLP-----INQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~~----------------~~~~~Ll~~~L~~dp~~R~s-----~~~~l~hp~~~~ 82 (84)
.+|++++|..||.+.+.... ..+.+++.+||..||.+|++ ..+++.||||..
T Consensus 190 il~elltG~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~ 262 (323)
T cd05615 190 LLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRR 262 (323)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCC
Confidence 47889999999976543322 12789999999999999997 578999999864
No 185
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=98.21 E-value=2.1e-06 Score=57.07 Aligned_cols=51 Identities=20% Similarity=0.216 Sum_probs=40.4
Q ss_pred hhhhhcCCCCCChh-----HHH--------------HHHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDD-----QAR--------------KVLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~-----~~~--------------~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+|++++|..||... ... ...++.+||.+||..+|.+||++.+++.|||+..
T Consensus 197 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 266 (283)
T cd06617 197 MIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFEL 266 (283)
T ss_pred HHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhh
Confidence 67888998888631 110 1123889999999999999999999999999964
No 186
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=98.21 E-value=2.1e-06 Score=57.04 Aligned_cols=29 Identities=38% Similarity=0.627 Sum_probs=27.6
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
.+.++|.+|+..||.+||++.+++.||||
T Consensus 255 ~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 255 EAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred HHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 48899999999999999999999999997
No 187
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=98.20 E-value=2.3e-06 Score=57.12 Aligned_cols=49 Identities=27% Similarity=0.317 Sum_probs=38.6
Q ss_pred hhhhhcCCCCCChhHHHH-------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 32 LHSELVGNQHLPDDQARK-------------------VLQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~-------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+|++++|..||.+.+... ...+.++|.+|+..||++||++.+++.|+|+
T Consensus 219 ~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 219 AIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred HHHHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 567778888876432211 1238999999999999999999999999996
No 188
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.20 E-value=1.1e-06 Score=59.58 Aligned_cols=51 Identities=20% Similarity=0.342 Sum_probs=40.2
Q ss_pred hhhhhcCCCCCChhHHH-------------------HHHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQAR-------------------KVLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~-------------------~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+|++++|..||...+.. ....+.+|+.+||..||.+||++.+++.|||+..
T Consensus 205 l~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 274 (297)
T cd06656 205 AIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKL 274 (297)
T ss_pred HHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcc
Confidence 67788888888543221 1123789999999999999999999999999863
No 189
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=98.20 E-value=1.5e-06 Score=60.47 Aligned_cols=77 Identities=14% Similarity=0.121 Sum_probs=50.9
Q ss_pred ceeeeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHHH--------------------HHHHHHHHHHhccC
Q psy17425 5 SFKIINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARKV--------------------LQLKDLLDKILMLD 64 (84)
Q Consensus 5 ~f~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~~--------------------~~~~~Ll~~~L~~d 64 (84)
...+..++.+.+.........++-..-+|++++|..||.+.+.... ..+++||.+++ .|
T Consensus 199 t~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~ 277 (360)
T cd05627 199 TPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TD 277 (360)
T ss_pred CccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cC
Confidence 3344555544444433333333444458899999999965433221 23889999977 59
Q ss_pred cCCCC---CHHHHhcCccccc
Q psy17425 65 TSKRL---PINQALTHPFILE 82 (84)
Q Consensus 65 p~~R~---s~~~~l~hp~~~~ 82 (84)
|.+|+ ++.+++.||||.+
T Consensus 278 p~~R~~~~~~~ei~~hp~f~~ 298 (360)
T cd05627 278 SENRIGSNGVEEIKSHPFFEG 298 (360)
T ss_pred hhhcCCCCCHHHHhcCCCCCC
Confidence 99998 4799999999964
No 190
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=98.20 E-value=1.2e-06 Score=57.47 Aligned_cols=48 Identities=23% Similarity=0.229 Sum_probs=38.8
Q ss_pred hhhhhcCCCCCChhHH---------------------HHHHHHHHHHHHHhccCcCCCCCHHHHhcCcc
Q psy17425 32 LHSELVGNQHLPDDQA---------------------RKVLQLKDLLDKILMLDTSKRLPINQALTHPF 79 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~---------------------~~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~ 79 (84)
+|+|++|..||.+.+. .....++++|++|+..||..||++.+++.|+|
T Consensus 194 l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 194 AIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 7888899988864321 11234789999999999999999999999998
No 191
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=98.20 E-value=9.6e-07 Score=59.34 Aligned_cols=51 Identities=29% Similarity=0.398 Sum_probs=40.2
Q ss_pred hhhhhcCCCCCChhH---HHH----------------HHHHHHHHHHHhccCcCCCC-----CHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQ---ARK----------------VLQLKDLLDKILMLDTSKRL-----PINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~---~~~----------------~~~~~~Ll~~~L~~dp~~R~-----s~~~~l~hp~~~~ 82 (84)
+|++++|..||.... ... ...++++|++||..||.+|+ ++.++++||||++
T Consensus 186 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~ 260 (279)
T cd05633 186 LFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKG 260 (279)
T ss_pred HHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccC
Confidence 678889999985321 111 12378999999999999999 6999999999975
No 192
>KOG0201|consensus
Probab=98.19 E-value=5.8e-07 Score=65.26 Aligned_cols=34 Identities=21% Similarity=0.259 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 49 KVLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 49 ~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
....+++|++.||..||+.||+|.++|.|.|++.
T Consensus 235 ~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 235 FSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred cCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence 3444999999999999999999999999999864
No 193
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=98.19 E-value=2.7e-06 Score=57.70 Aligned_cols=51 Identities=18% Similarity=0.120 Sum_probs=40.8
Q ss_pred hhhhhcCCCCCChhHHH------------------HHHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQAR------------------KVLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~------------------~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+|++++|..||...+.. ....++++|.+||..||.+||++.+++.|||+..
T Consensus 204 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 272 (307)
T cd06607 204 CIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLR 272 (307)
T ss_pred HHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 67788998887653221 1224799999999999999999999999999964
No 194
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=98.18 E-value=1.1e-06 Score=60.20 Aligned_cols=54 Identities=22% Similarity=0.267 Sum_probs=42.3
Q ss_pred CchhhhhhcCCCCCChhHHHHHH----------------HHHHHHHHHhccCcCCCCCHH----HHhcCccccc
Q psy17425 29 TRDLHSELVGNQHLPDDQARKVL----------------QLKDLLDKILMLDTSKRLPIN----QALTHPFILE 82 (84)
Q Consensus 29 ~~~L~~~l~g~~p~~~~~~~~~~----------------~~~~Ll~~~L~~dp~~R~s~~----~~l~hp~~~~ 82 (84)
...+|++++|..||.+.+..... .+.++|++||..||.+|+++. ++++|+|+..
T Consensus 183 G~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~ 256 (325)
T cd05602 183 GAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSP 256 (325)
T ss_pred cHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCC
Confidence 34588899999999764433221 289999999999999999876 8999999853
No 195
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=98.17 E-value=5e-07 Score=56.64 Aligned_cols=30 Identities=20% Similarity=0.159 Sum_probs=27.8
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCcccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFIL 81 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~ 81 (84)
.++++|.+||..||.+||++.+++.|+|..
T Consensus 140 ~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 140 SFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred hHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 379999999999999999999999999864
No 196
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=98.17 E-value=2.8e-06 Score=55.25 Aligned_cols=49 Identities=31% Similarity=0.356 Sum_probs=39.0
Q ss_pred hhhhhcCCCCCChhHHHH-----------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 32 LHSELVGNQHLPDDQARK-----------------VLQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~-----------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+|++++|..||...+... ...+.+++.+||..+|++||++.+++.||||
T Consensus 189 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 189 VIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred HHHHHhCCCCCCCccHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 677888888886432211 1238899999999999999999999999997
No 197
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=98.17 E-value=2.1e-06 Score=56.46 Aligned_cols=49 Identities=22% Similarity=0.270 Sum_probs=40.2
Q ss_pred hhhhhcCCCCCChhHH---H----------------HHHHHHHHHHHHhccCcCCCCCH--HHHhcCccc
Q psy17425 32 LHSELVGNQHLPDDQA---R----------------KVLQLKDLLDKILMLDTSKRLPI--NQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~---~----------------~~~~~~~Ll~~~L~~dp~~R~s~--~~~l~hp~~ 80 (84)
+|++++|..||...+. . ....+.++|++|+..||.+|+++ .++++||||
T Consensus 189 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 189 AYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred HHHHHhCCCCCCCCCccHHHHHHHHhccccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 6788899988876441 1 11248999999999999999999 999999997
No 198
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=98.17 E-value=6.5e-07 Score=65.00 Aligned_cols=51 Identities=24% Similarity=0.266 Sum_probs=41.4
Q ss_pred hhhhhhcCCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhcCcccc
Q psy17425 31 DLHSELVGNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALTHPFIL 81 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~ 81 (84)
.+|++++|..||...+...+ ..++++|.+||..||.+||++.+++.|+|+.
T Consensus 260 ~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~ 327 (478)
T PTZ00267 260 ILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLK 327 (478)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHH
Confidence 37788999999876433221 2389999999999999999999999999874
No 199
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=98.17 E-value=9.9e-07 Score=59.83 Aligned_cols=51 Identities=24% Similarity=0.441 Sum_probs=40.2
Q ss_pred hhhhhcCCCCCChhHHHH-------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQARK-------------------VLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~-------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+|++++|..||...+... ...+.++|.+||..+|.+||++.+++.|||+..
T Consensus 207 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~ 276 (297)
T cd06659 207 VIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQ 276 (297)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhcc
Confidence 677888998885432211 113789999999999999999999999999864
No 200
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=98.17 E-value=3.7e-06 Score=62.77 Aligned_cols=29 Identities=24% Similarity=0.517 Sum_probs=27.3
Q ss_pred HHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 54 KDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 54 ~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
.+||++||..||.+|||+.++++||||.+
T Consensus 427 ~dLi~~mL~~dP~kR~ta~e~L~Hpff~~ 455 (566)
T PLN03225 427 WELLKSMMRFKGRQRISAKAALAHPYFDR 455 (566)
T ss_pred HHHHHHHccCCcccCCCHHHHhCCcCcCC
Confidence 48999999999999999999999999975
No 201
>KOG0667|consensus
Probab=98.17 E-value=2.2e-06 Score=64.17 Aligned_cols=30 Identities=37% Similarity=0.630 Sum_probs=28.9
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
++|||.+||..||.+|+|+.++++|||+++
T Consensus 478 F~dflk~~L~~dP~~R~tp~qal~Hpfl~~ 507 (586)
T KOG0667|consen 478 FIDFLKRCLEWDPAERITPAQALNHPFLTG 507 (586)
T ss_pred HHHHHHHHhccCchhcCCHHHHhcCccccc
Confidence 899999999999999999999999999974
No 202
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=98.17 E-value=1e-06 Score=59.21 Aligned_cols=30 Identities=43% Similarity=0.608 Sum_probs=28.3
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+.++|.+||..+|.+||++.+++.||||.+
T Consensus 260 ~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~ 289 (294)
T PLN00009 260 GVDLLSKMLRLDPSKRITARAALEHEYFKD 289 (294)
T ss_pred HHHHHHHHccCChhhCcCHHHHhcCchHhH
Confidence 678999999999999999999999999975
No 203
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=98.17 E-value=2e-06 Score=59.60 Aligned_cols=30 Identities=43% Similarity=0.742 Sum_probs=28.3
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+.+||.+||..||.+|+++.+++.||||++
T Consensus 276 ~~~li~~~L~~dp~~R~t~~e~l~h~~f~~ 305 (345)
T cd07877 276 AVDLLEKMLVLDSDKRITAAQALAHAYFAQ 305 (345)
T ss_pred HHHHHHHHcCCChhhcCCHHHHhcChhhhh
Confidence 679999999999999999999999999975
No 204
>KOG0579|consensus
Probab=98.16 E-value=1.8e-06 Score=66.01 Aligned_cols=43 Identities=23% Similarity=0.356 Sum_probs=35.5
Q ss_pred CCCCChhHHHHHHHHHHHHHHHhccCcCCCCCHHHHhcCcccc
Q psy17425 39 NQHLPDDQARKVLQLKDLLDKILMLDTSKRLPINQALTHPFIL 81 (84)
Q Consensus 39 ~~p~~~~~~~~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~ 81 (84)
.+|.-.....+...|.|||++||..||..||++.+++.|||++
T Consensus 251 ePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~ 293 (1187)
T KOG0579|consen 251 EPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQ 293 (1187)
T ss_pred CCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccc
Confidence 3444444445566699999999999999999999999999997
No 205
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=98.16 E-value=3.3e-06 Score=56.90 Aligned_cols=51 Identities=24% Similarity=0.270 Sum_probs=40.5
Q ss_pred hhhhhcCCCCCChhHH--HH------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQA--RK------------------VLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~--~~------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+|++++|+.||...+. .. ..++.+|+.+||..||.+||++++++.|+|+..
T Consensus 208 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 278 (296)
T cd06618 208 LVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRR 278 (296)
T ss_pred HHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhc
Confidence 6788899999865211 10 113789999999999999999999999999864
No 206
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=98.16 E-value=1.2e-06 Score=58.56 Aligned_cols=51 Identities=25% Similarity=0.343 Sum_probs=40.8
Q ss_pred hhhhhcCCCCCChhHHH-------------------HHHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQAR-------------------KVLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~-------------------~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+|+++.|..||...+.. ....++++|++||..+|.+||++.+++.|+|+..
T Consensus 206 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 275 (286)
T cd06614 206 CIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKK 275 (286)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhc
Confidence 67788888887653321 1123899999999999999999999999999975
No 207
>KOG1027|consensus
Probab=98.16 E-value=1.7e-06 Score=66.83 Aligned_cols=77 Identities=18% Similarity=0.177 Sum_probs=51.0
Q ss_pred cceeeeeecCCCCCceEEEecccCCCchhhhhhcC-CCCCChhHHHHH---------------H--HHHHHHHHHhccCc
Q psy17425 4 ISFKIINFHFPPSQEKIVTMSTIHPTRDLHSELVG-NQHLPDDQARKV---------------L--QLKDLLDKILMLDT 65 (84)
Q Consensus 4 ~~f~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g-~~p~~~~~~~~~---------------~--~~~~Ll~~~L~~dp 65 (84)
|+-.|..++.+.+.....-+..++-...+|..++| +.||.+...+.. . .+.|||++||..+|
T Consensus 676 Gt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP 755 (903)
T KOG1027|consen 676 GTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTLVHLEPLPDCEAKDLISRMLNPDP 755 (903)
T ss_pred CcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCccceeeeccCchHHHHHHHHHhcCCCc
Confidence 44455666655555554444444444444444544 567765433311 0 48999999999999
Q ss_pred CCCCCHHHHhcCccc
Q psy17425 66 SKRLPINQALTHPFI 80 (84)
Q Consensus 66 ~~R~s~~~~l~hp~~ 80 (84)
..||+|.++|+||+|
T Consensus 756 ~~RPsa~~VL~HPlF 770 (903)
T KOG1027|consen 756 QLRPSATDVLNHPLF 770 (903)
T ss_pred ccCCCHHHHhCCCcc
Confidence 999999999999987
No 208
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=98.15 E-value=2.5e-06 Score=56.54 Aligned_cols=29 Identities=48% Similarity=0.756 Sum_probs=27.3
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
.+.++|++||..+|.+||++.+++.||||
T Consensus 259 ~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 259 SALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 36799999999999999999999999997
No 209
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=98.15 E-value=3.9e-06 Score=57.09 Aligned_cols=51 Identities=18% Similarity=0.129 Sum_probs=39.9
Q ss_pred hhhhhcCCCCCChhHHHH------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQARK------------------VLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+|++++|..||.+.+... ...+.+||++||..+|.+||++.+++.|+|+..
T Consensus 204 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~ 272 (308)
T cd06634 204 CIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 272 (308)
T ss_pred HHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence 677888888875432211 112889999999999999999999999999853
No 210
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=98.13 E-value=3.2e-06 Score=55.89 Aligned_cols=28 Identities=25% Similarity=0.473 Sum_probs=26.6
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCcc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPF 79 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~ 79 (84)
.+.++|.+||..||++||++++++.|||
T Consensus 240 ~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 240 SFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred HHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 3789999999999999999999999998
No 211
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=98.13 E-value=2.9e-06 Score=56.63 Aligned_cols=51 Identities=22% Similarity=0.238 Sum_probs=40.6
Q ss_pred hhhhhcCCCCCChhHHHH-----------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQARK-----------------VLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~-----------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+|++++|..||....... ...+.++|.+|+..+|.+||++.+++.|||+..
T Consensus 191 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~ 258 (277)
T cd06641 191 AIELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVR 258 (277)
T ss_pred HHHHHcCCCCCCccchHHHHHHHhcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhh
Confidence 677888988886433221 123889999999999999999999999999853
No 212
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=98.13 E-value=2.1e-06 Score=59.91 Aligned_cols=77 Identities=12% Similarity=0.023 Sum_probs=48.7
Q ss_pred ceeeeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHHH--------------------HHHHHHHHHHhccC
Q psy17425 5 SFKIINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARKV--------------------LQLKDLLDKILMLD 64 (84)
Q Consensus 5 ~f~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~~--------------------~~~~~Ll~~~L~~d 64 (84)
...+..++.+.+.........++-...+|+|++|..||.+.+.... .++++||.+++. +
T Consensus 199 t~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~ 277 (363)
T cd05628 199 TPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-E 277 (363)
T ss_pred CccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-C
Confidence 3344455555444333333333333458899999999975433211 138899998774 4
Q ss_pred cC---CCCCHHHHhcCccccc
Q psy17425 65 TS---KRLPINQALTHPFILE 82 (84)
Q Consensus 65 p~---~R~s~~~~l~hp~~~~ 82 (84)
+. .|++++++++||||.+
T Consensus 278 ~~~r~~r~~~~ei~~hp~f~~ 298 (363)
T cd05628 278 WEHRIGAPGVEEIKTNPFFEG 298 (363)
T ss_pred hhhcCCCCCHHHHhCCCCCCC
Confidence 54 4579999999999964
No 213
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=98.12 E-value=1e-06 Score=59.60 Aligned_cols=51 Identities=22% Similarity=0.341 Sum_probs=40.4
Q ss_pred hhhhhcCCCCCChhHHH-------------------HHHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQAR-------------------KVLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~-------------------~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+|++++|..||...+.. ....+.++|++||..+|.+||++.+++.|+||+.
T Consensus 205 l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~ 274 (293)
T cd06647 205 AIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKI 274 (293)
T ss_pred HHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhc
Confidence 56778888888653221 1123789999999999999999999999999974
No 214
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=98.12 E-value=4.4e-06 Score=56.12 Aligned_cols=29 Identities=45% Similarity=0.694 Sum_probs=27.5
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
.+.++|.+||..||.+||++.+++.|||+
T Consensus 274 ~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 274 PALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred HHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 47899999999999999999999999996
No 215
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=98.11 E-value=2.5e-06 Score=58.70 Aligned_cols=52 Identities=15% Similarity=0.203 Sum_probs=39.7
Q ss_pred hhhhhhcCCCCCChh-------HHHH----------------HHHHHHHHHHHhccCcCCCCC------HHHHhcCcccc
Q psy17425 31 DLHSELVGNQHLPDD-------QARK----------------VLQLKDLLDKILMLDTSKRLP------INQALTHPFIL 81 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~-------~~~~----------------~~~~~~Ll~~~L~~dp~~R~s------~~~~l~hp~~~ 81 (84)
.+|++++|..||... .... ...+.++|.+||..||.+|++ ..+++.||||.
T Consensus 185 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~ 264 (327)
T cd05617 185 LMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFR 264 (327)
T ss_pred HHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCC
Confidence 478899999999421 0011 112799999999999999998 46999999996
Q ss_pred c
Q psy17425 82 E 82 (84)
Q Consensus 82 ~ 82 (84)
.
T Consensus 265 ~ 265 (327)
T cd05617 265 S 265 (327)
T ss_pred C
Confidence 4
No 216
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=98.10 E-value=2.8e-06 Score=55.76 Aligned_cols=49 Identities=20% Similarity=0.322 Sum_probs=39.3
Q ss_pred hhhhhcCCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 32 LHSELVGNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
++++++|..||...+.... ..+.++|.+|+..+|.+||++.+++.|+|+
T Consensus 191 ~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 191 LYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 5678888888865433221 238999999999999999999999999985
No 217
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=98.09 E-value=3e-06 Score=56.05 Aligned_cols=49 Identities=18% Similarity=0.290 Sum_probs=37.7
Q ss_pred hhhhhcCCCCCChhHHH------------------HHHHHHHHHHHHhccCcCCCCCHHHHhcCcccc
Q psy17425 32 LHSELVGNQHLPDDQAR------------------KVLQLKDLLDKILMLDTSKRLPINQALTHPFIL 81 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~------------------~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~ 81 (84)
+|++++|..||...... ....+.++|++|+ .+|.+||++++++.|||+.
T Consensus 199 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l-~~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 199 VVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIF-VEAKLRPSADELLRHTFVH 265 (265)
T ss_pred HHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHh-cChhhCCCHHHHhcCcccC
Confidence 67788899888542111 1123789999998 5999999999999999974
No 218
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=98.09 E-value=4.1e-06 Score=54.86 Aligned_cols=51 Identities=24% Similarity=0.280 Sum_probs=40.7
Q ss_pred hhhhhcCCCCCChhH---HH------------------HHHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQ---AR------------------KVLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~---~~------------------~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+|++++|..||.... .. ....+.++|++||..+|.+||++.+++.|||++.
T Consensus 190 l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~ 261 (264)
T cd06623 190 LLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKK 261 (264)
T ss_pred HHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHh
Confidence 567888888886552 00 1223899999999999999999999999999964
No 219
>KOG0597|consensus
Probab=98.08 E-value=1.8e-06 Score=65.04 Aligned_cols=76 Identities=20% Similarity=0.204 Sum_probs=57.3
Q ss_pred eeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHHHHH----------------HHHHHHHHhccCcCCCCCH
Q psy17425 8 IINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARKVLQ----------------LKDLLDKILMLDTSKRLPI 71 (84)
Q Consensus 8 ~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~~~~----------------~~~Ll~~~L~~dp~~R~s~ 71 (84)
|..++.+.|+........++-..-||++..|++||...+.-.+.. |++||+.+|.+||.+|.+=
T Consensus 166 YmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~~~S~~f~nfl~gLL~kdP~~RltW 245 (808)
T KOG0597|consen 166 YMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPSTASSSFVNFLQGLLIKDPAQRLTW 245 (808)
T ss_pred ccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcccccHHHHHHHHHHhhcChhhcccH
Confidence 344444444444444444444556899999999998876654443 9999999999999999999
Q ss_pred HHHhcCcccccC
Q psy17425 72 NQALTHPFILEK 83 (84)
Q Consensus 72 ~~~l~hp~~~~~ 83 (84)
.+++.|||+++.
T Consensus 246 ~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 246 TDLLGHPFWKGK 257 (808)
T ss_pred HHHhcChHHhhh
Confidence 999999999753
No 220
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=98.07 E-value=3.6e-06 Score=57.87 Aligned_cols=30 Identities=40% Similarity=0.768 Sum_probs=28.0
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+.++|.+|+..||.+|||+.+++.|||+..
T Consensus 271 l~~li~~~l~~~P~~Rps~~~il~~~~~~~ 300 (337)
T cd07852 271 ALDLLKKLLVFNPNKRLTAEEALEHPYVAQ 300 (337)
T ss_pred HHHHHHHhccCCcccccCHHHHhhChhhhh
Confidence 688999999999999999999999999853
No 221
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=98.06 E-value=5.2e-06 Score=57.51 Aligned_cols=30 Identities=37% Similarity=0.716 Sum_probs=28.2
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+.++|.+||..||.+|+|+.+++.||||..
T Consensus 274 ~~~li~~~l~~dP~~R~t~~~~l~~~~~~~ 303 (343)
T cd07880 274 AVNVLEKMLVLDAESRITAAEALAHPYFEE 303 (343)
T ss_pred HHHHHHHHcCCChhhCCCHHHHhcCccHhh
Confidence 689999999999999999999999999964
No 222
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=98.05 E-value=5.7e-06 Score=55.48 Aligned_cols=52 Identities=25% Similarity=0.418 Sum_probs=41.5
Q ss_pred hhhhhhcCCCCCChh---HHHH----------------HHHHHHHHHHHhccCcCCCC-----CHHHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDD---QARK----------------VLQLKDLLDKILMLDTSKRL-----PINQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~---~~~~----------------~~~~~~Ll~~~L~~dp~~R~-----s~~~~l~hp~~~~ 82 (84)
.+|++++|..||.+. .... ..++.++|.+||..+|.+|+ ++.+++.|||+.+
T Consensus 185 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~ 260 (278)
T cd05606 185 MLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRS 260 (278)
T ss_pred HHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccC
Confidence 367888999998653 1111 12488999999999999999 9999999999975
No 223
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=98.05 E-value=4.5e-06 Score=55.15 Aligned_cols=48 Identities=17% Similarity=0.079 Sum_probs=37.5
Q ss_pred hhhhhcCCCCCChhHHH---------------------HHHHHHHHHHHHhccCcCCCCCHHHHhcCcc
Q psy17425 32 LHSELVGNQHLPDDQAR---------------------KVLQLKDLLDKILMLDTSKRLPINQALTHPF 79 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~---------------------~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~ 79 (84)
+|++++|..||.+.... ....+.+||++||..||.+||++++++.|+|
T Consensus 199 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 199 AIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred HHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 67788888777432211 1134889999999999999999999999987
No 224
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=98.05 E-value=7.6e-06 Score=56.44 Aligned_cols=31 Identities=39% Similarity=0.743 Sum_probs=28.8
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
.+.++|++||..+|.+||++.+++.|||+..
T Consensus 263 ~~~~li~~~l~~~P~~R~t~~ell~~~~~~~ 293 (328)
T cd07856 263 SAIDLLEKMLVFDPQKRISAAEALAHPYLAP 293 (328)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHhcCCcccc
Confidence 4789999999999999999999999999954
No 225
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=98.04 E-value=4.8e-06 Score=58.62 Aligned_cols=53 Identities=23% Similarity=0.256 Sum_probs=40.0
Q ss_pred chhhhhhcCCCCCChhHHHH--------------------HHHHHHHHHHHhccCcCC--CCCHHHHhcCccccc
Q psy17425 30 RDLHSELVGNQHLPDDQARK--------------------VLQLKDLLDKILMLDTSK--RLPINQALTHPFILE 82 (84)
Q Consensus 30 ~~L~~~l~g~~p~~~~~~~~--------------------~~~~~~Ll~~~L~~dp~~--R~s~~~~l~hp~~~~ 82 (84)
..+|++++|..||...+... ...+++||.+||..++.+ |+++.++++|||++.
T Consensus 235 ~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~ 309 (370)
T cd05621 235 VFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKN 309 (370)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCC
Confidence 35889999999997543211 112799999999755543 889999999999974
No 226
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=98.00 E-value=5.9e-06 Score=54.26 Aligned_cols=48 Identities=10% Similarity=0.162 Sum_probs=37.2
Q ss_pred hhhhhhcCCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhcCc
Q psy17425 31 DLHSELVGNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALTHP 78 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~hp 78 (84)
.+|+++.|..||...+.... ..+.++|.+||..||.+||++.+++...
T Consensus 189 i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~ 253 (255)
T cd08219 189 ILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSRG 253 (255)
T ss_pred hheehhhccCCCCCCCHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhcc
Confidence 36778888888876543221 2378999999999999999999998753
No 227
>PHA03211 serine/threonine kinase US3; Provisional
Probab=98.00 E-value=4.6e-06 Score=60.84 Aligned_cols=31 Identities=19% Similarity=0.342 Sum_probs=29.0
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
.+.+||.+||..||.+|||+.|+|+||||+.
T Consensus 430 ~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 430 DVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred hHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 3789999999999999999999999999975
No 228
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=98.00 E-value=9.1e-06 Score=55.83 Aligned_cols=30 Identities=40% Similarity=0.794 Sum_probs=28.3
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCcccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFIL 81 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~ 81 (84)
.+.+|+.+||..||.+||++.+++.|||+.
T Consensus 267 ~~~~li~~~l~~~P~~R~t~~~ll~~~~~~ 296 (332)
T cd07857 267 LALDLLEKLLAFDPTKRISVEEALEHPYLA 296 (332)
T ss_pred HHHHHHHHHccCCcccCCCHHHHhcChhhh
Confidence 478999999999999999999999999996
No 229
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=97.99 E-value=8.9e-06 Score=55.54 Aligned_cols=50 Identities=18% Similarity=0.132 Sum_probs=39.5
Q ss_pred hhhhhcCCCCCChhHHHH------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCcccc
Q psy17425 32 LHSELVGNQHLPDDQARK------------------VLQLKDLLDKILMLDTSKRLPINQALTHPFIL 81 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~ 81 (84)
+|+++.|..||.+.+... ...++++|.+||..+|.+||++.+++.|+|+.
T Consensus 214 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~ 281 (317)
T cd06635 214 CIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVL 281 (317)
T ss_pred HHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhh
Confidence 677888988875532211 11278999999999999999999999999974
No 230
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=97.98 E-value=1.3e-05 Score=51.26 Aligned_cols=49 Identities=41% Similarity=0.605 Sum_probs=38.3
Q ss_pred hhhhhcCCCCCCh-hHHH-------------------HHHHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 32 LHSELVGNQHLPD-DQAR-------------------KVLQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~-~~~~-------------------~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
++++++|..||.. .+.. ....+.+++.+|+..+|.+||++.+++.|||+
T Consensus 176 l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 176 LYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred HHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 4567788888865 2221 12347899999999999999999999999996
No 231
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=97.96 E-value=3e-06 Score=55.65 Aligned_cols=49 Identities=22% Similarity=0.398 Sum_probs=36.4
Q ss_pred hhhhhcCCCCCChhHH------------HHHHHHHHHHHHHhccCcCCCCCH-----HHHhcCccc
Q psy17425 32 LHSELVGNQHLPDDQA------------RKVLQLKDLLDKILMLDTSKRLPI-----NQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~------------~~~~~~~~Ll~~~L~~dp~~R~s~-----~~~l~hp~~ 80 (84)
+|++++|..++..... ....+++++|.+||..||.+|+++ ++++.||||
T Consensus 172 l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 172 LFELLTGKTLVECHPSGINTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred HHHHHHCcchhhcCchhcccccccCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 6777888755432111 012248899999999999999985 999999997
No 232
>KOG0607|consensus
Probab=97.96 E-value=7e-06 Score=58.53 Aligned_cols=30 Identities=37% Similarity=0.692 Sum_probs=28.6
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
++|||+.+|.+|+..|.++...++|||+..
T Consensus 337 akdlisnLlvrda~~rlsa~~vlnhPw~~~ 366 (463)
T KOG0607|consen 337 AKDLISNLLVRDAKQRLSAAQVLNHPWVQR 366 (463)
T ss_pred HHHHHHHHHhccHHhhhhhhhccCCccccc
Confidence 999999999999999999999999999863
No 233
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=97.94 E-value=8.3e-06 Score=54.61 Aligned_cols=51 Identities=25% Similarity=0.404 Sum_probs=38.4
Q ss_pred hhhhhcCCCCCChhHH----HH----------------HHHHHHHHHHHhccCcCCCCC---HHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQA----RK----------------VLQLKDLLDKILMLDTSKRLP---INQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~----~~----------------~~~~~~Ll~~~L~~dp~~R~s---~~~~l~hp~~~~ 82 (84)
+|++++|..||..+.. .. ...+.++|.+||..||++||| +.++++|||++.
T Consensus 198 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~ 271 (288)
T cd05583 198 TFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQG 271 (288)
T ss_pred HHHHHhCCCCcccCcccchHHHHHHHHHccCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCccccc
Confidence 6778889888853210 11 123799999999999999998 567799999864
No 234
>KOG0593|consensus
Probab=97.89 E-value=1.6e-05 Score=56.23 Aligned_cols=29 Identities=45% Similarity=0.669 Sum_probs=28.0
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCcccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFIL 81 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~ 81 (84)
+.||+++||.+||.+|+++++++.|+||.
T Consensus 260 ~ld~~k~cL~~dP~~R~sc~qll~H~yFd 288 (396)
T KOG0593|consen 260 LLDLLKKCLKMDPDDRLSCEQLLHHPYFD 288 (396)
T ss_pred HHHHHHHHhcCCccccccHHHHhcChHHH
Confidence 89999999999999999999999999994
No 235
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=97.88 E-value=1.3e-05 Score=53.11 Aligned_cols=48 Identities=21% Similarity=0.350 Sum_probs=37.0
Q ss_pred hhhhhcCCCCCChhHHHH------------------HHHHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 32 LHSELVGNQHLPDDQARK------------------VLQLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~~------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
+|++++|..||.+..... ...+.++|++|+. ++.+||++.+++.|||+
T Consensus 199 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 199 VVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred HHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 677888988886432111 1128999999998 67999999999999985
No 236
>PHA02988 hypothetical protein; Provisional
Probab=97.88 E-value=1.9e-05 Score=53.38 Aligned_cols=46 Identities=20% Similarity=0.278 Sum_probs=36.6
Q ss_pred hhhhhhcCCCCCChhHHHHH------------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 31 DLHSELVGNQHLPDDQARKV------------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~~------------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
.+|++++|..||.+.+...+ ..+++++.+||..||.+|||+.+++.
T Consensus 211 il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 211 VLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 36788899999976543322 12889999999999999999999985
No 237
>KOG0690|consensus
Probab=97.87 E-value=1.2e-05 Score=57.67 Aligned_cols=53 Identities=23% Similarity=0.349 Sum_probs=45.0
Q ss_pred chhhhhhcCCCCCChhHHHHHHH----------------HHHHHHHHhccCcCCCCC-----HHHHhcCccccc
Q psy17425 30 RDLHSELVGNQHLPDDQARKVLQ----------------LKDLLDKILMLDTSKRLP-----INQALTHPFILE 82 (84)
Q Consensus 30 ~~L~~~l~g~~p~~~~~~~~~~~----------------~~~Ll~~~L~~dp~~R~s-----~~~~l~hp~~~~ 82 (84)
..+|+|+||..||...+...+.+ ++.||..+|.+||.+|.. +.|+++|+||.+
T Consensus 356 VVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~ 429 (516)
T KOG0690|consen 356 VVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFAS 429 (516)
T ss_pred HHHHHHHhccCcccccchhHHHHHHHhhhccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhcc
Confidence 35899999999998766655443 899999999999999985 789999999864
No 238
>KOG0671|consensus
Probab=97.87 E-value=1.4e-05 Score=57.50 Aligned_cols=32 Identities=41% Similarity=0.756 Sum_probs=29.7
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCcccccC
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFILEK 83 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~~ 83 (84)
++.|||++||..||.+|+|+.|+|.||||+..
T Consensus 381 ~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 381 QLFDLLRRMLEFDPARRITLREALSHPFFARL 412 (415)
T ss_pred HHHHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence 38999999999999999999999999999753
No 239
>KOG0574|consensus
Probab=97.87 E-value=8.5e-06 Score=57.89 Aligned_cols=60 Identities=18% Similarity=0.216 Sum_probs=46.7
Q ss_pred ecccCCCchhhhhhcCCCCCChhHHHHHHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 23 MSTIHPTRDLHSELVGNQHLPDDQARKVLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 23 ~~~~~p~~~L~~~l~g~~p~~~~~~~~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
++++||.+.+|-+-+.-+|.......+..++.|||++||..+|++|-|+.+++.|||++.
T Consensus 229 YsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~Fikn 288 (502)
T KOG0574|consen 229 YSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKN 288 (502)
T ss_pred cccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcC
Confidence 455666666655445445555555567778999999999999999999999999999864
No 240
>PLN00181 protein SPA1-RELATED; Provisional
Probab=97.87 E-value=1.3e-05 Score=61.45 Aligned_cols=75 Identities=11% Similarity=-0.028 Sum_probs=48.7
Q ss_pred eeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHH---------------HHHHHHHHHHHHhccCcCCCCCHH
Q psy17425 8 IINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQAR---------------KVLQLKDLLDKILMLDTSKRLPIN 72 (84)
Q Consensus 8 ~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~---------------~~~~~~~Ll~~~L~~dp~~R~s~~ 72 (84)
|..++.+.+.........++-...||++++|.+|+...... ......+++.+||..||.+||++.
T Consensus 181 Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~ 260 (793)
T PLN00181 181 YTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSCRPSMS 260 (793)
T ss_pred eEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHhhcChhhhhcCHHHHHHHHHhCCCChhhCcChH
Confidence 45555544443322222223333478888888776542110 112367889999999999999999
Q ss_pred HHhcCccccc
Q psy17425 73 QALTHPFILE 82 (84)
Q Consensus 73 ~~l~hp~~~~ 82 (84)
+++.|||+.+
T Consensus 261 eil~h~~~~~ 270 (793)
T PLN00181 261 ELLQSEFINE 270 (793)
T ss_pred HHhhchhhhh
Confidence 9999999964
No 241
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=97.87 E-value=1.6e-05 Score=55.90 Aligned_cols=53 Identities=21% Similarity=0.182 Sum_probs=39.3
Q ss_pred chhhhhhcCCCCCChhHHHH--------------------HHHHHHHHHHHhccCcCC--CCCHHHHhcCccccc
Q psy17425 30 RDLHSELVGNQHLPDDQARK--------------------VLQLKDLLDKILMLDTSK--RLPINQALTHPFILE 82 (84)
Q Consensus 30 ~~L~~~l~g~~p~~~~~~~~--------------------~~~~~~Ll~~~L~~dp~~--R~s~~~~l~hp~~~~ 82 (84)
.-+|+|++|..||...+... ...+++||.+||..++.+ |+++.++++|+|+..
T Consensus 235 vilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~ 309 (371)
T cd05622 235 VFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN 309 (371)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCC
Confidence 34899999999997644321 112899999999743332 779999999999965
No 242
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=97.83 E-value=3.4e-05 Score=53.22 Aligned_cols=52 Identities=17% Similarity=0.273 Sum_probs=39.1
Q ss_pred hhhhhhcCCCCCChhHHHH---------------------HHHHHHHHHHHhccCcCC--CCCHHHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQARK---------------------VLQLKDLLDKILMLDTSK--RLPINQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~---------------------~~~~~~Ll~~~L~~dp~~--R~s~~~~l~hp~~~~ 82 (84)
.+|++++|..||.+.+... ...+++||++||..++.+ |+++.+++.||||.+
T Consensus 197 ~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~ 271 (331)
T cd05597 197 CMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEG 271 (331)
T ss_pred HHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCC
Confidence 4788999999997643221 123899999988664444 789999999999964
No 243
>KOG1167|consensus
Probab=97.82 E-value=1.3e-05 Score=57.82 Aligned_cols=31 Identities=52% Similarity=0.729 Sum_probs=29.0
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
.+.|||.+||++||.+|+|++++|.||||.+
T Consensus 356 ~~~dlLdk~le~np~kRitAEeALkHpFF~~ 386 (418)
T KOG1167|consen 356 LLLDLLDKCLELNPQKRITAEDALKHPFFDE 386 (418)
T ss_pred HHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence 3799999999999999999999999999964
No 244
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=97.80 E-value=3.5e-05 Score=53.09 Aligned_cols=52 Identities=17% Similarity=0.257 Sum_probs=39.1
Q ss_pred hhhhhhcCCCCCChhHHHH---------------------HHHHHHHHHHHhccCcCC--CCCHHHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQARK---------------------VLQLKDLLDKILMLDTSK--RLPINQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~---------------------~~~~~~Ll~~~L~~dp~~--R~s~~~~l~hp~~~~ 82 (84)
.+|++++|..||...+... ...+++||++||..++.+ |+++.+++.||||.+
T Consensus 197 il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~ 271 (332)
T cd05623 197 CMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTG 271 (332)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCC
Confidence 4788999999997643321 123899999999665544 679999999999964
No 245
>KOG0665|consensus
Probab=97.79 E-value=2.1e-05 Score=55.70 Aligned_cols=30 Identities=43% Similarity=0.847 Sum_probs=28.5
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCcccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFIL 81 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~ 81 (84)
.+.+|+.+||.+||++|.|++++|+|||++
T Consensus 285 ~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 285 LARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred HHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 389999999999999999999999999985
No 246
>KOG4645|consensus
Probab=97.75 E-value=3.9e-05 Score=61.93 Aligned_cols=64 Identities=20% Similarity=0.249 Sum_probs=49.9
Q ss_pred CCceEEEecccCCCchh-------hhhhcCC-CCCChhHHHHHHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 16 SQEKIVTMSTIHPTRDL-------HSELVGN-QHLPDDQARKVLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 16 ~~~~~~~~~~~~p~~~L-------~~~l~g~-~p~~~~~~~~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
||=+++++++..||..+ |..-+|. +++|.. ...+.+|||++||+.||+.|+++.+++.|.|.+.
T Consensus 1428 GCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~---ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1428 GCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPER---LSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKS 1499 (1509)
T ss_pred cceEEEeecCCCchhhccchhHHHhHHhccCCCCCchh---hhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccc
Confidence 44588999999998764 4444564 444443 5556899999999999999999999999999754
No 247
>PHA03210 serine/threonine kinase US3; Provisional
Probab=97.73 E-value=2.3e-05 Score=57.41 Aligned_cols=30 Identities=23% Similarity=0.231 Sum_probs=27.7
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+.++|.+||..||.+|||+.|++.||||..
T Consensus 430 ~~~li~kmL~~DP~~Rpsa~elL~hp~f~~ 459 (501)
T PHA03210 430 FEYPLVKMLTFDWHLRPGAAELLALPLFSA 459 (501)
T ss_pred HHHHHHHHhccCcccCcCHHHHhhChhhhc
Confidence 567799999999999999999999999964
No 248
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=97.73 E-value=2.7e-05 Score=51.68 Aligned_cols=45 Identities=18% Similarity=0.180 Sum_probs=34.8
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||.+.+.... ..+.+++.+||..||.+||++.+++.
T Consensus 214 l~e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 214 LWEIFTYGKQPWYGLSNEEVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 677887 8888865332221 23899999999999999999999875
No 249
>KOG0661|consensus
Probab=97.72 E-value=3.4e-05 Score=56.92 Aligned_cols=31 Identities=35% Similarity=0.608 Sum_probs=29.2
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
++.+||.+|+..||.+||||.++++||||+.
T Consensus 266 ~~~~li~~ll~WDP~kRpTA~~al~~pffq~ 296 (538)
T KOG0661|consen 266 EAASLIERLLAWDPDKRPTASQALQHPFFQV 296 (538)
T ss_pred HHHHHHHHHhcCCCccCccHHHHhcCccccc
Confidence 4899999999999999999999999999964
No 250
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=97.69 E-value=2e-05 Score=52.92 Aligned_cols=30 Identities=20% Similarity=0.320 Sum_probs=27.5
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhc------Cccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALT------HPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~------hp~~~~ 82 (84)
+.+++.+||..||++||++.+++. |||+.+
T Consensus 250 ~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~ 285 (288)
T cd05061 250 VTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPE 285 (288)
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCC
Confidence 899999999999999999999986 888864
No 251
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=97.68 E-value=3.1e-05 Score=61.34 Aligned_cols=50 Identities=18% Similarity=0.195 Sum_probs=40.4
Q ss_pred hhhhhcCCCCCChhHH-HH----------------HHHHHHHHHHHhccCcCCCCCHHHHhcCcccc
Q psy17425 32 LHSELVGNQHLPDDQA-RK----------------VLQLKDLLDKILMLDTSKRLPINQALTHPFIL 81 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~-~~----------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~ 81 (84)
||++++|..||...+. .. ..++.+||..||..+|.+||++.++|.|+|+.
T Consensus 233 LYELLTGk~PF~~~~~~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik 299 (1021)
T PTZ00266 233 IYELCSGKTPFHKANNFSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIK 299 (1021)
T ss_pred HHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHh
Confidence 6788999999964321 11 12389999999999999999999999999985
No 252
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=97.67 E-value=3.3e-05 Score=51.77 Aligned_cols=51 Identities=27% Similarity=0.481 Sum_probs=39.0
Q ss_pred hhhhhcCCCCCChhH----HHHH----------------HHHHHHHHHHhccCcCCCC-----CHHHHhcCccccc
Q psy17425 32 LHSELVGNQHLPDDQ----ARKV----------------LQLKDLLDKILMLDTSKRL-----PINQALTHPFILE 82 (84)
Q Consensus 32 L~~~l~g~~p~~~~~----~~~~----------------~~~~~Ll~~~L~~dp~~R~-----s~~~~l~hp~~~~ 82 (84)
+|++++|..||.... ...+ ..+.+++++||..||.+|+ ++.+++.||||..
T Consensus 198 l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~ 273 (290)
T cd05613 198 MYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQK 273 (290)
T ss_pred HHHHhcCCCCCCcCCccccHHHHHHHhhccCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCccccc
Confidence 677888988885211 1111 1278999999999999997 8999999999864
No 253
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=97.67 E-value=3e-05 Score=51.12 Aligned_cols=45 Identities=20% Similarity=0.287 Sum_probs=34.2
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||.+.+.... ..+.+++.+|+..+|.+|||+.++..
T Consensus 193 l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 193 LTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 667777 7788866433221 23789999999999999999998763
No 254
>KOG0983|consensus
Probab=97.66 E-value=8.3e-05 Score=52.26 Aligned_cols=54 Identities=22% Similarity=0.247 Sum_probs=41.2
Q ss_pred chhhhhhcCCCCCChhHH--H------------------HHHHHHHHHHHHhccCcCCCCCHHHHhcCcccccC
Q psy17425 30 RDLHSELVGNQHLPDDQA--R------------------KVLQLKDLLDKILMLDTSKRLPINQALTHPFILEK 83 (84)
Q Consensus 30 ~~L~~~l~g~~p~~~~~~--~------------------~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~~ 83 (84)
..|+++.+|..||..-+. . ...+|++|+..||++|+.+||.-.++|.|||+..+
T Consensus 282 ITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~y 355 (391)
T KOG0983|consen 282 ITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRY 355 (391)
T ss_pred cchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeec
Confidence 346777777777765211 1 12239999999999999999999999999998653
No 255
>KOG0586|consensus
Probab=97.65 E-value=2.3e-05 Score=58.79 Aligned_cols=56 Identities=23% Similarity=0.294 Sum_probs=47.9
Q ss_pred CCCchhhhhhcCCCCCChhHHHHHHH----------------HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 27 HPTRDLHSELVGNQHLPDDQARKVLQ----------------LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 27 ~p~~~L~~~l~g~~p~~~~~~~~~~~----------------~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
.-...||.+++|..||++.+...+.+ +.+||+++|..+|.+|+++++++.|.|...
T Consensus 240 slgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~ 311 (596)
T KOG0586|consen 240 SLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRND 311 (596)
T ss_pred hhhhhheeeeecccccCCcccccccchheeeeecccceeechhHHHHHHhhccCccccCCHHHhhhhcccch
Confidence 34456899999999999877765544 999999999999999999999999999753
No 256
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=97.64 E-value=4.8e-05 Score=50.06 Aligned_cols=46 Identities=13% Similarity=0.106 Sum_probs=34.6
Q ss_pred hhhhhhc-CCCCCChhHHHH-----------------HHHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 31 DLHSELV-GNQHLPDDQARK-----------------VLQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 31 ~L~~~l~-g~~p~~~~~~~~-----------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
.+|++++ |..||....... ..++.+++.+|+..+|++||+++++..
T Consensus 193 ~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 193 LLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred HHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 3677777 888886532221 123899999999999999999998864
No 257
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=97.64 E-value=4.2e-05 Score=50.41 Aligned_cols=46 Identities=15% Similarity=0.210 Sum_probs=35.4
Q ss_pred hhhhhc-CCCCCChhHHHHHH-----------------HHHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 32 LHSELV-GNQHLPDDQARKVL-----------------QLKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~~-----------------~~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
+|++++ |..||.+.+..... .+.+++.+|+..||.+||++.+++.+
T Consensus 205 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 205 MWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 677777 77888654433222 37899999999999999999998763
No 258
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=97.64 E-value=3.2e-05 Score=50.27 Aligned_cols=46 Identities=20% Similarity=0.260 Sum_probs=35.0
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
+|++++ |..||........ .++.+++.+|+..||.+||++.+++.+
T Consensus 197 l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 197 LWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 677777 5788865432211 238999999999999999999999864
No 259
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=97.63 E-value=4.3e-05 Score=51.39 Aligned_cols=45 Identities=18% Similarity=0.195 Sum_probs=34.6
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||...+.... ..+.+++.+|+..||.+||++.+++.
T Consensus 215 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 215 LWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 667887 8888855433221 12899999999999999999998874
No 260
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=97.59 E-value=6.5e-05 Score=51.80 Aligned_cols=53 Identities=15% Similarity=0.198 Sum_probs=39.3
Q ss_pred chhhhhhcCCCCCChhHHHH---------------------HHHHHHHHHHHhccCcCC--CCCHHHHhcCccccc
Q psy17425 30 RDLHSELVGNQHLPDDQARK---------------------VLQLKDLLDKILMLDTSK--RLPINQALTHPFILE 82 (84)
Q Consensus 30 ~~L~~~l~g~~p~~~~~~~~---------------------~~~~~~Ll~~~L~~dp~~--R~s~~~~l~hp~~~~ 82 (84)
..||++++|..||...+... ...++++|.+||..++.+ |.++++++.|+||..
T Consensus 196 vil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~ 271 (331)
T cd05624 196 VCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEG 271 (331)
T ss_pred hhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCC
Confidence 34788999999996543211 124899999999866554 468999999999864
No 261
>KOG0612|consensus
Probab=97.59 E-value=9.2e-05 Score=59.20 Aligned_cols=51 Identities=27% Similarity=0.372 Sum_probs=44.7
Q ss_pred hhhhhhcCCCCCChhHHHHHHH--------------------HHHHHHHHhccCcCCCCC---HHHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQARKVLQ--------------------LKDLLDKILMLDTSKRLP---INQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~~~~--------------------~~~Ll~~~L~~dp~~R~s---~~~~l~hp~~~~ 82 (84)
-+|+|+.|..||.+++...++. +++||++++ .+|..|.+ ++++.+||||.+
T Consensus 270 ~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll-~~~e~RLgrngiedik~HpFF~g 343 (1317)
T KOG0612|consen 270 FMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALL-CDREVRLGRNGIEDIKNHPFFEG 343 (1317)
T ss_pred HHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHh-cChhhhcccccHHHHHhCccccC
Confidence 4899999999999887766553 999999987 89999998 999999999964
No 262
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=97.58 E-value=4.6e-05 Score=50.12 Aligned_cols=45 Identities=9% Similarity=0.152 Sum_probs=34.7
Q ss_pred hhhhhc-CCCCCChhHHHHHH-----------------HHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKVL-----------------QLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~~-----------------~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||...+..... .+.+++.+|+..+|.+||++.+++.
T Consensus 191 l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 191 MWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 677777 78888654332211 2789999999999999999999875
No 263
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=97.58 E-value=3.4e-05 Score=51.33 Aligned_cols=46 Identities=15% Similarity=0.055 Sum_probs=34.9
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
+|++++ |..||.+.+...+ .++.+|+.+|+..||.+||++.+++++
T Consensus 216 l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 216 LWEIFSYGLQPYYGFSNQEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 677776 8888765322222 237899999999999999999999864
No 264
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=97.57 E-value=5.4e-05 Score=49.87 Aligned_cols=45 Identities=16% Similarity=0.148 Sum_probs=34.6
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||.+.+.... .++.+++.+|+..+|++||++++++.
T Consensus 193 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 193 LTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred HHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 566777 8889865432211 24899999999999999999998875
No 265
>KOG0587|consensus
Probab=97.55 E-value=0.00011 Score=57.37 Aligned_cols=60 Identities=23% Similarity=0.344 Sum_probs=45.8
Q ss_pred cccCCCchhhhhhcCCCCCChhHHHHHHHHHHHHHHHhccCcCCCCCHHHHhcCcccccC
Q psy17425 24 STIHPTRDLHSELVGNQHLPDDQARKVLQLKDLLDKILMLDTSKRLPINQALTHPFILEK 83 (84)
Q Consensus 24 ~~~~p~~~L~~~l~g~~p~~~~~~~~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~~ 83 (84)
...||.+.|+.+--.=+|-.....++..+|.+||..||..|-.+||+..+++.|||+++.
T Consensus 229 ~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~ 288 (953)
T KOG0587|consen 229 CDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQ 288 (953)
T ss_pred cCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCccccc
Confidence 445666666554333334344566788889999999999999999999999999999754
No 266
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=97.54 E-value=0.00011 Score=48.93 Aligned_cols=46 Identities=13% Similarity=0.206 Sum_probs=35.2
Q ss_pred hhhhhc-CCCCCChhHHHHHH-----------------HHHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 32 LHSELV-GNQHLPDDQARKVL-----------------QLKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~~-----------------~~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
+|++++ |..||......... .+.+++.+|+..+|++||++.+++.|
T Consensus 211 l~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 211 LWEIFSLGYMPYPGRTNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 566675 77888764332222 37799999999999999999999876
No 267
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=97.53 E-value=5.1e-05 Score=50.77 Aligned_cols=45 Identities=11% Similarity=0.148 Sum_probs=33.9
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |.+||.+...... ..+.++|.+|+..||.+||++.+++.
T Consensus 214 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 214 LWEIFTYGKQPWYQLSNTEAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred HHHHHcCCCCCCccCCHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 567776 7888855322111 22889999999999999999999874
No 268
>KOG0658|consensus
Probab=97.53 E-value=0.0001 Score=52.60 Aligned_cols=30 Identities=50% Similarity=0.668 Sum_probs=28.6
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
..+|+.++|+.+|.+|.++.+++.||||.+
T Consensus 282 ~~dll~~~L~Y~P~~R~~~~~~l~h~fFde 311 (364)
T KOG0658|consen 282 ALDLLSKLLQYSPSKRLSALEALAHPFFDE 311 (364)
T ss_pred HHHHHHHHhccChhhcCCHHHHhcchhhHH
Confidence 899999999999999999999999999964
No 269
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=97.52 E-value=7.1e-05 Score=49.96 Aligned_cols=46 Identities=17% Similarity=0.132 Sum_probs=34.7
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
+|++++ |..||...+...+ ..+.+++.+|+..||.+||++.+++.+
T Consensus 216 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 216 LWEIFSFGLQPYYGFSNQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 677776 7788865332211 127899999999999999999998764
No 270
>KOG0611|consensus
Probab=97.52 E-value=9.2e-05 Score=54.46 Aligned_cols=77 Identities=12% Similarity=0.116 Sum_probs=56.5
Q ss_pred ceeeeeecCCCCCceEE-EecccCCCchhhhhhcCCCCCChhHHHHHHH---------------HHHHHHHHhccCcCCC
Q psy17425 5 SFKIINFHFPPSQEKIV-TMSTIHPTRDLHSELVGNQHLPDDQARKVLQ---------------LKDLLDKILMLDTSKR 68 (84)
Q Consensus 5 ~f~~~~~d~~~~~~~~~-~~~~~~p~~~L~~~l~g~~p~~~~~~~~~~~---------------~~~Ll~~~L~~dp~~R 68 (84)
+=+|+.++.++|+...- -+..++-..-||.++.|..||++-+.+.+.. +.-||++||.+||.+|
T Consensus 215 SPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~~PSdA~gLIRwmLmVNP~RR 294 (668)
T KOG0611|consen 215 SPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPETPSDASGLIRWMLMVNPERR 294 (668)
T ss_pred CcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCCCCchHHHHHHHHHhcCcccc
Confidence 33567777777774321 1222333345899999999999866654432 8999999999999999
Q ss_pred CCHHHHhcCcccc
Q psy17425 69 LPINQALTHPFIL 81 (84)
Q Consensus 69 ~s~~~~l~hp~~~ 81 (84)
.|+.++-.|=|+.
T Consensus 295 ATieDiAsHWWvN 307 (668)
T KOG0611|consen 295 ATIEDIASHWWVN 307 (668)
T ss_pred hhHHHHhhhheee
Confidence 9999999997764
No 271
>KOG0663|consensus
Probab=97.51 E-value=0.00014 Score=52.09 Aligned_cols=31 Identities=39% Similarity=0.580 Sum_probs=29.3
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
...+|+..+|..||.+|.|++++|.|.||.+
T Consensus 336 ~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e 366 (419)
T KOG0663|consen 336 QGFDLLNKLLTYDPGKRITAEDGLKHEYFRE 366 (419)
T ss_pred hHHHHHHHHhccCccccccHHHhhccccccc
Confidence 3789999999999999999999999999986
No 272
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=97.51 E-value=0.00011 Score=49.18 Aligned_cols=47 Identities=17% Similarity=0.162 Sum_probs=34.7
Q ss_pred hhhhhhc-CCCCCChhHHHH-----------------HHHHHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 31 DLHSELV-GNQHLPDDQARK-----------------VLQLKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 31 ~L~~~l~-g~~p~~~~~~~~-----------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
.+|++++ |..||.+.+... ...+.+|+.+|+..||.+|||+.+++.+
T Consensus 223 il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 223 LLWEIFTLGGSPYPGIPVEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 3666665 777776533221 1238899999999999999999999864
No 273
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=97.49 E-value=0.00017 Score=47.64 Aligned_cols=45 Identities=16% Similarity=0.172 Sum_probs=34.6
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||++.+.... .++.++|.+|+..||.+||++.+++.
T Consensus 195 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 195 LWEIATYGMSPYPGIDLSQVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 677877 7788865333222 13889999999999999999999875
No 274
>KOG0576|consensus
Probab=97.49 E-value=7.2e-05 Score=57.25 Aligned_cols=59 Identities=20% Similarity=0.309 Sum_probs=49.5
Q ss_pred cccCCCchhhhhhcCC--CCCChhHHHHHHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 24 STIHPTRDLHSELVGN--QHLPDDQARKVLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 24 ~~~~p~~~L~~~l~g~--~p~~~~~~~~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
...||.+.||-|.... +|--.+..++..-|-+|++.+|..+|++||+++.+|.|||+..
T Consensus 216 fdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~ 276 (829)
T KOG0576|consen 216 FDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ 276 (829)
T ss_pred cccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence 4467888888777543 5666777788888999999999999999999999999999875
No 275
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=97.47 E-value=9.9e-05 Score=49.83 Aligned_cols=45 Identities=13% Similarity=0.110 Sum_probs=34.5
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||.+...... ..+.+|+.+|+..+|.+||++++++.
T Consensus 208 l~el~t~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 270 (297)
T cd05089 208 LWEIVSLGGTPYCGMTCAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISV 270 (297)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 677776 8888865433221 23889999999999999999999865
No 276
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=97.47 E-value=0.00014 Score=47.98 Aligned_cols=45 Identities=13% Similarity=0.145 Sum_probs=33.9
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||...+.... .++.+++.+|+..+|.+||+..+++.
T Consensus 193 l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 193 LMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 667777 7888875432211 23889999999999999999988764
No 277
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=97.46 E-value=9e-05 Score=48.88 Aligned_cols=45 Identities=20% Similarity=0.281 Sum_probs=34.2
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||+..+.... ..+.++|.+||..+|.+||++.+++.
T Consensus 203 l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 203 MWEILTLGQQPYPALNNQEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred HHHHHHcCCCCCcccCHHHHHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 677776 8888865332221 23799999999999999999999864
No 278
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=97.46 E-value=7e-05 Score=50.26 Aligned_cols=45 Identities=20% Similarity=0.184 Sum_probs=34.2
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||...+.... ..+.+++.+||..||.+|||+.+++.
T Consensus 212 l~~l~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 212 LWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 677887 7888865332211 23899999999999999999999854
No 279
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=97.45 E-value=0.00016 Score=47.71 Aligned_cols=46 Identities=13% Similarity=0.210 Sum_probs=34.3
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
+|++++ |..||........ ..+.++|.+||..||++|||+.+++.+
T Consensus 204 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 204 MWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 566777 6788865333221 228899999999999999999998753
No 280
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=97.44 E-value=0.0002 Score=47.15 Aligned_cols=45 Identities=11% Similarity=0.148 Sum_probs=34.6
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||.+.+...+ .++.++|++|+..||..||+++++..
T Consensus 188 l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 188 MWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 677776 8888875433221 23899999999999999999988764
No 281
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=97.42 E-value=0.00024 Score=46.85 Aligned_cols=45 Identities=18% Similarity=0.203 Sum_probs=34.2
Q ss_pred hhhhhc-CCCCCChhHHHH-----------------HHHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARK-----------------VLQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~-----------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||.+..... ...+.+++++|+..||.+||++++++.
T Consensus 193 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 193 LTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 677787 778886532221 123899999999999999999998864
No 282
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=97.42 E-value=0.0001 Score=48.18 Aligned_cols=45 Identities=13% Similarity=0.230 Sum_probs=33.4
Q ss_pred hhhhhc-CCCCCChhHHHH-----------------HHHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARK-----------------VLQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~-----------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||....... ...+.+++.+|+..+|.+||++.+++.
T Consensus 185 ~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 185 LWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred HHHHHhccCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 566776 677775422111 124899999999999999999999885
No 283
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=97.40 E-value=9.4e-05 Score=48.87 Aligned_cols=46 Identities=15% Similarity=0.039 Sum_probs=34.9
Q ss_pred hhhhhcCCCCCChhHHH------------------HHHHHHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 32 LHSELVGNQHLPDDQAR------------------KVLQLKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~------------------~~~~~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
+|++++|..||...+.. ....+.+++++|+..||.+||++.++..+
T Consensus 203 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 203 LYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred HHHHHhCCCcccccCHHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 67788888888553221 12248999999999999999999998653
No 284
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=97.40 E-value=0.00035 Score=51.88 Aligned_cols=30 Identities=37% Similarity=0.453 Sum_probs=27.4
Q ss_pred HHHHHHHHhccCc---CCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDT---SKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp---~~R~s~~~~l~hp~~~~ 82 (84)
++||+.++|..++ .+|+|+.++|.||||..
T Consensus 473 ~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 473 GWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred HHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 8999999999876 68999999999999964
No 285
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=97.40 E-value=0.00023 Score=46.64 Aligned_cols=46 Identities=11% Similarity=0.175 Sum_probs=34.7
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
+|++++ |..||........ ..+.+++.+||..+|++||++.+++++
T Consensus 191 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 191 MWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred HHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 667776 7888865432221 127899999999999999999998863
No 286
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=97.38 E-value=0.00026 Score=46.76 Aligned_cols=46 Identities=9% Similarity=0.070 Sum_probs=34.4
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
+|++++ |..||...+.... ..+++++.+||..||.+||++.+++.+
T Consensus 191 l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 191 MWEVYSLGKMPYERFNNSETVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred HHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 666776 8888864322211 128999999999999999999999864
No 287
>KOG0669|consensus
Probab=97.38 E-value=0.00018 Score=50.12 Aligned_cols=30 Identities=47% Similarity=0.731 Sum_probs=28.1
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+.||++++|..||.+|+.++++++|.||..
T Consensus 291 a~dLle~ll~~DP~kR~~ad~alnh~~F~k 320 (376)
T KOG0669|consen 291 ALDLLEKLLKLDPTKRIDADQALNHDFFWK 320 (376)
T ss_pred HHHHHHHHhccCcccCcchHhhhchhhhhc
Confidence 689999999999999999999999999854
No 288
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=97.37 E-value=0.0001 Score=49.10 Aligned_cols=45 Identities=16% Similarity=0.171 Sum_probs=34.1
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||.+.+.... .++.+++.+|+..||++|||+.+++.
T Consensus 209 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 209 LWELMTLGQTPYVEIDPFEMAAYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred HHHHhcCCCCCcCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 566676 8888875432221 23889999999999999999999875
No 289
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=97.37 E-value=0.00012 Score=48.65 Aligned_cols=45 Identities=16% Similarity=0.131 Sum_probs=33.9
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||...+.... .++.+++.+|+..||.+||++.+++.
T Consensus 201 l~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 201 LWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred HHHHHcCCCCCccccCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 677775 8888854322111 23889999999999999999999875
No 290
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=97.37 E-value=0.00026 Score=46.51 Aligned_cols=45 Identities=9% Similarity=0.144 Sum_probs=34.6
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||...+.... ..++++|.+|+..+|.+||++.+++.
T Consensus 188 l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 188 LWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred HHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 667776 8888865433222 23789999999999999999999874
No 291
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=97.36 E-value=0.00015 Score=47.94 Aligned_cols=26 Identities=19% Similarity=0.218 Sum_probs=23.6
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
.+.+++.+|+..+|.+||++.+++.+
T Consensus 236 ~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 236 ALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 38899999999999999999999864
No 292
>KOG0666|consensus
Probab=97.35 E-value=0.00016 Score=51.62 Aligned_cols=31 Identities=45% Similarity=0.700 Sum_probs=29.3
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCcccccC
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILEK 83 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~~ 83 (84)
..+||.++|+.||.+|+|++++++|+||++.
T Consensus 313 a~~LL~klL~yDP~kRIta~qAleh~yF~~d 343 (438)
T KOG0666|consen 313 ALDLLQKLLTYDPIKRITAEQALEHPYFTED 343 (438)
T ss_pred HHHHHHHHhccCchhhccHHHHhcccccccC
Confidence 7899999999999999999999999999764
No 293
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=97.35 E-value=0.0003 Score=46.17 Aligned_cols=45 Identities=11% Similarity=0.164 Sum_probs=34.0
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||...+.... ..+.+++.+|+..||.+|||+.+++.
T Consensus 194 l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 194 LYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred HHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 667776 7788865433221 12889999999999999999998874
No 294
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=97.34 E-value=0.00021 Score=48.50 Aligned_cols=47 Identities=15% Similarity=0.096 Sum_probs=35.1
Q ss_pred hhhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 31 DLHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 31 ~L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
.+|++++ |..||...+.... ..+.+||.+|+..+|++||++.+++.+
T Consensus 212 il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 212 LLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred HHHHHHhcCCCCcccCChHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 4677876 8888854322211 237899999999999999999998863
No 295
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=97.34 E-value=0.00014 Score=47.58 Aligned_cols=24 Identities=13% Similarity=0.243 Sum_probs=22.3
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+.+++.+||..+|.+||++.+++.
T Consensus 225 ~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 225 VYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHH
Confidence 789999999999999999999874
No 296
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=97.33 E-value=7.5e-05 Score=49.71 Aligned_cols=46 Identities=15% Similarity=0.148 Sum_probs=34.2
Q ss_pred hhhhhc-CCCCCChhHHHHHH-----------------HHHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 32 LHSELV-GNQHLPDDQARKVL-----------------QLKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~~-----------------~~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
+|++++ |..||......... .+.+++.+||..||.+||++.+++.+
T Consensus 211 l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 211 LWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 566776 56787654332211 28899999999999999999998863
No 297
>KOG0584|consensus
Probab=97.32 E-value=0.00026 Score=53.55 Aligned_cols=30 Identities=30% Similarity=0.579 Sum_probs=28.2
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCcccccC
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILEK 83 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~~ 83 (84)
.++||.+||.. ...|+|+.|+|.||||...
T Consensus 273 vr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 273 VREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred HHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 89999999988 9999999999999999763
No 298
>KOG0986|consensus
Probab=97.31 E-value=8.7e-05 Score=54.87 Aligned_cols=80 Identities=16% Similarity=0.179 Sum_probs=53.6
Q ss_pred ccceeeeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHH----HH----------------HHHHHHHHHHhc
Q psy17425 3 LISFKIINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQAR----KV----------------LQLKDLLDKILM 62 (84)
Q Consensus 3 ~~~f~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~----~~----------------~~~~~Ll~~~L~ 62 (84)
+|.=.++.++.+.+........-+.-...||+|+.|..||..-..+ ++ .+++++.+.+|.
T Consensus 347 vGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~eakslc~~LL~ 426 (591)
T KOG0986|consen 347 VGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEAKSLCEGLLT 426 (591)
T ss_pred cCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccCHHHHHHHHHHHc
Confidence 3555666676665553222222222334689999999999642111 11 129999999999
Q ss_pred cCcCCCCC-----HHHHhcCccccc
Q psy17425 63 LDTSKRLP-----INQALTHPFILE 82 (84)
Q Consensus 63 ~dp~~R~s-----~~~~l~hp~~~~ 82 (84)
+||.+|.. +.++..||||++
T Consensus 427 Kdp~~RLGcrg~ga~evk~HpfFk~ 451 (591)
T KOG0986|consen 427 KDPEKRLGCRGEGAQEVKEHPFFKD 451 (591)
T ss_pred cCHHHhccCCCcCcchhhhCccccc
Confidence 99999985 568999999974
No 299
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=97.30 E-value=0.00017 Score=47.75 Aligned_cols=45 Identities=18% Similarity=0.165 Sum_probs=33.8
Q ss_pred hhhhhc-CCCCCChhHHHH-----------------HHHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARK-----------------VLQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~-----------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||.+..... ...+.+++.+|+..||.+||++.+++.
T Consensus 193 l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 193 LTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred HHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 567777 677886532221 123889999999999999999998875
No 300
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=97.28 E-value=0.00024 Score=46.83 Aligned_cols=45 Identities=18% Similarity=0.168 Sum_probs=34.0
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||.+...... ..+.+++.+|+..+|.+||++.+++.
T Consensus 194 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 194 LTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 566777 7888865333211 23899999999999999999999864
No 301
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=97.28 E-value=0.00016 Score=47.10 Aligned_cols=45 Identities=16% Similarity=0.228 Sum_probs=33.3
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|+++. |..||...+.... .++.+++.+|+..||.+|||+.+++.
T Consensus 194 ~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 194 LWEIFTLGESPYPGMSNEEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 455666 6777764333221 23889999999999999999999875
No 302
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=97.28 E-value=0.00015 Score=47.82 Aligned_cols=45 Identities=16% Similarity=0.135 Sum_probs=34.0
Q ss_pred hhhhhcCCCCCChhHH--------------------HHHHHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELVGNQHLPDDQA--------------------RKVLQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~--------------------~~~~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
++++++|..||..+.. .....+.+++.+|+..+|.+||++.+++.
T Consensus 196 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 196 LYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred HHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence 5677788888754311 11123899999999999999999999986
No 303
>KOG4236|consensus
Probab=97.28 E-value=6.6e-05 Score=56.67 Aligned_cols=74 Identities=15% Similarity=0.275 Sum_probs=55.8
Q ss_pred eecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHH-HH-HH----------------HHHHHHHHHhccCcCCCCCH
Q psy17425 10 NFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQA-RK-VL----------------QLKDLLDKILMLDTSKRLPI 71 (84)
Q Consensus 10 ~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~-~~-~~----------------~~~~Ll~~~L~~dp~~R~s~ 71 (84)
.++.+..++.-+.+..++-..-+|..+.|+.||+.++. .+ +. .++|||..+|++.=.+|.|.
T Consensus 734 aPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysv 813 (888)
T KOG4236|consen 734 APEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSV 813 (888)
T ss_pred CHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcch
Confidence 34445555555666666666667888999999986432 11 11 29999999999999999999
Q ss_pred HHHhcCcccccC
Q psy17425 72 NQALTHPFILEK 83 (84)
Q Consensus 72 ~~~l~hp~~~~~ 83 (84)
+..+.|||++++
T Consensus 814 dk~lsh~Wlq~y 825 (888)
T KOG4236|consen 814 DKSLSHPWLQDY 825 (888)
T ss_pred Hhhccchhhhcc
Confidence 999999999875
No 304
>KOG0589|consensus
Probab=97.27 E-value=0.00031 Score=51.28 Aligned_cols=52 Identities=15% Similarity=0.205 Sum_probs=44.3
Q ss_pred chhhhhhcCCCCCChhHHHHHHH-----------------HHHHHHHHhccCcCCCCCHHHHhcCcccc
Q psy17425 30 RDLHSELVGNQHLPDDQARKVLQ-----------------LKDLLDKILMLDTSKRLPINQALTHPFIL 81 (84)
Q Consensus 30 ~~L~~~l~g~~p~~~~~~~~~~~-----------------~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~ 81 (84)
..+|+|++-+++|.+.+...+.. ++.||+.||..+|..||++.++|.+|.+.
T Consensus 194 C~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~ 262 (426)
T KOG0589|consen 194 CCLYEMCTLKPAFKASNMSELILKINRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLL 262 (426)
T ss_pred chHHHHHhcccccCccchHHHHHHHhhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhh
Confidence 35899999999998876654432 89999999999999999999999998765
No 305
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=97.27 E-value=0.00013 Score=49.61 Aligned_cols=45 Identities=18% Similarity=0.234 Sum_probs=33.4
Q ss_pred hhhhhc-CCCCCChhHHHH------------------HHHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARK------------------VLQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||....... ...+.+++.+||..+|++||++.+++.
T Consensus 233 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 233 LWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred HHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 566676 888876422111 123889999999999999999999875
No 306
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=97.26 E-value=0.00025 Score=46.98 Aligned_cols=45 Identities=13% Similarity=0.107 Sum_probs=33.7
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||.+.+.... ..+.+++.+|+..+|.+|||+.+++.
T Consensus 211 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 211 LWEMATLAEQPYQGLSNEEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred HHHhhccCCCCCccCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 566666 7778765332221 22789999999999999999999875
No 307
>KOG0614|consensus
Probab=97.26 E-value=0.00011 Score=55.06 Aligned_cols=76 Identities=14% Similarity=0.115 Sum_probs=65.4
Q ss_pred eeeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHHHHH------------------HHHHHHHHhccCcCCC
Q psy17425 7 KIINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARKVLQ------------------LKDLLDKILMLDTSKR 68 (84)
Q Consensus 7 ~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~~~~------------------~~~Ll~~~L~~dp~~R 68 (84)
-||.++.+.++++-+.+..+.-..-+|+++.|.+||.+.++..+++ +.+||+++-.-+|..|
T Consensus 584 EYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ER 663 (732)
T KOG0614|consen 584 EYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTER 663 (732)
T ss_pred ccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhh
Confidence 3678888999999998888887777899999999999887776665 8899999989999998
Q ss_pred CC-----HHHHhcCccccc
Q psy17425 69 LP-----INQALTHPFILE 82 (84)
Q Consensus 69 ~s-----~~~~l~hp~~~~ 82 (84)
.. +.++-+|.||-+
T Consensus 664 LG~~~~gI~DIkkH~Wf~g 682 (732)
T KOG0614|consen 664 LGYQKGGINDIKKHRWFEG 682 (732)
T ss_pred hccccCChHHHHhhhhhhc
Confidence 85 899999999853
No 308
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=97.26 E-value=0.00022 Score=46.70 Aligned_cols=45 Identities=7% Similarity=0.118 Sum_probs=33.8
Q ss_pred hhhhhc-CCCCCChhHHHHH------------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV------------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~------------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||...+.... ..+.+++.+|+..+|.+||++.+++.
T Consensus 190 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 190 LWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 566776 8888854322211 23889999999999999999999875
No 309
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=97.26 E-value=0.00016 Score=47.58 Aligned_cols=45 Identities=18% Similarity=0.144 Sum_probs=33.7
Q ss_pred hhhhhcCCCCCChhHHH--------------------HHHHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELVGNQHLPDDQAR--------------------KVLQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~~--------------------~~~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++|..||...... ....++++|.+|+..||.+|||+.+++.
T Consensus 196 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 196 LYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred HHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 67788888888542210 1124899999999999999999997763
No 310
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=97.26 E-value=0.00042 Score=45.71 Aligned_cols=45 Identities=16% Similarity=0.263 Sum_probs=33.1
Q ss_pred hhhhhcCC-CCCChhHHHHH---------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELVGN-QHLPDDQARKV---------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~g~-~p~~~~~~~~~---------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++|. .|+...+.... .++.+++.+||..||++|||+.+++.
T Consensus 195 l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 255 (258)
T cd05078 195 LWEIFSGGDKPLSALDSQKKLQFYEDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIR 255 (258)
T ss_pred HHHHHcCCCCChhhccHHHHHHHHHccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 67788884 55544322111 23789999999999999999999886
No 311
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=97.25 E-value=0.00044 Score=45.33 Aligned_cols=45 Identities=20% Similarity=0.229 Sum_probs=33.5
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
++++++ |..||.......+ ..+.++|.+||..+|.+||++.+++.
T Consensus 189 l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 189 LWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 455665 7778765433221 34889999999999999999999875
No 312
>KOG0659|consensus
Probab=97.25 E-value=0.0002 Score=49.84 Aligned_cols=30 Identities=40% Similarity=0.659 Sum_probs=28.6
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+.||+.+|+..||.+|+++.+++.|+||+.
T Consensus 257 ~ldLl~~m~~ynP~~Rita~qaL~~~yf~~ 286 (318)
T KOG0659|consen 257 ALDLLSKMLTYNPKKRITASQALKHPYFKS 286 (318)
T ss_pred HHHHHHhhhccCchhcccHHHHhcchhhhc
Confidence 689999999999999999999999999974
No 313
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=97.25 E-value=0.00012 Score=50.25 Aligned_cols=45 Identities=13% Similarity=0.161 Sum_probs=33.9
Q ss_pred hhhhhc-CCCCCChhHHH-----H-------------HHHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQAR-----K-------------VLQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~-----~-------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
||++++ |..||.+.... . ...+.+++.+|+..||.+||++.+++.
T Consensus 266 l~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 266 LWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred HHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 667775 88888753211 0 123889999999999999999999875
No 314
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=97.24 E-value=0.0002 Score=47.73 Aligned_cols=45 Identities=16% Similarity=0.092 Sum_probs=33.7
Q ss_pred hhhhhc-CCCCCChhHHHHHHH-----------------HHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKVLQ-----------------LKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~~~-----------------~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||.+.......+ +.+++.+|+..+|.+||++.+++.
T Consensus 216 l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~ 278 (283)
T cd05091 216 LWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHS 278 (283)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 566776 667776533322221 789999999999999999999986
No 315
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=97.24 E-value=0.00047 Score=46.22 Aligned_cols=45 Identities=13% Similarity=0.192 Sum_probs=34.2
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
++++++ |..||++.....+ ..+.+++.+||..+|.+||++.+++.
T Consensus 219 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 219 LWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 566776 8888875433221 23889999999999999999999874
No 316
>KOG2345|consensus
Probab=97.23 E-value=0.00017 Score=49.85 Aligned_cols=57 Identities=18% Similarity=0.199 Sum_probs=41.8
Q ss_pred EEecccCCCchhhhhhcCCCCCChhHH--------------------HHHHHHHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 21 VTMSTIHPTRDLHSELVGNQHLPDDQA--------------------RKVLQLKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 21 ~~~~~~~p~~~L~~~l~g~~p~~~~~~--------------------~~~~~~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
+....++-...||+|+.|..||..... +....+.++|++||++||.+||++.+++.+
T Consensus 220 ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 220 ERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred cccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 333444445578999999888864322 122338999999999999999999998864
No 317
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=97.23 E-value=0.00026 Score=46.48 Aligned_cols=45 Identities=20% Similarity=0.204 Sum_probs=34.7
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||...+...+ ..+.+++.+|+..+|.+|||+.+++.
T Consensus 189 ~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 189 LWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 566775 8888875443322 23799999999999999999999875
No 318
>KOG0696|consensus
Probab=97.22 E-value=0.00036 Score=51.54 Aligned_cols=51 Identities=22% Similarity=0.313 Sum_probs=43.4
Q ss_pred hhhhhhcCCCCCChhHHHHHHH----------------HHHHHHHHhccCcCCCCCH-----HHHhcCcccc
Q psy17425 31 DLHSELVGNQHLPDDQARKVLQ----------------LKDLLDKILMLDTSKRLPI-----NQALTHPFIL 81 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~~~~----------------~~~Ll~~~L~~dp~~R~s~-----~~~l~hp~~~ 81 (84)
-||+|++|.+||++++..++.+ +.++.+.+|...|.+|..+ .++-.||||+
T Consensus 539 LLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR 610 (683)
T KOG0696|consen 539 LLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFR 610 (683)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchh
Confidence 3899999999999887766554 8889999999999999864 6778899985
No 319
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=97.22 E-value=0.00026 Score=46.82 Aligned_cols=45 Identities=20% Similarity=0.216 Sum_probs=33.7
Q ss_pred hhhhhc-CCCCCChhHHHH-----------------HHHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARK-----------------VLQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~-----------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||.+..... ..++.+++.+|+..+|.+||++.+++.
T Consensus 198 l~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 198 MWEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 566664 888886543221 123899999999999999999999875
No 320
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=97.20 E-value=0.00047 Score=45.81 Aligned_cols=46 Identities=20% Similarity=0.244 Sum_probs=33.9
Q ss_pred hhhhh-cCCCCCChhHHHH---------------HHHHHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 32 LHSEL-VGNQHLPDDQARK---------------VLQLKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 32 L~~~l-~g~~p~~~~~~~~---------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
+|+++ .|..|+....... ..++.+|+.+|+..||.+||+..+++.+
T Consensus 199 l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 199 LWEICYNGEIPLKDKTLAEKERFYEGQCMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred HHHHHhCCCCCCCCcchhHHHHHHhcCccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 56666 4667776433211 1237899999999999999999999864
No 321
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.19 E-value=0.00029 Score=48.00 Aligned_cols=45 Identities=13% Similarity=0.184 Sum_probs=33.3
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||...+.... .++++++.+||..||.+||++.+++.
T Consensus 226 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 226 MWEIFTLGGSPYPGIPVEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 566676 6777765332211 13889999999999999999998875
No 322
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.19 E-value=0.00028 Score=48.48 Aligned_cols=46 Identities=15% Similarity=0.216 Sum_probs=34.7
Q ss_pred hhhhhc-CCCCCChhHHHHHH-----------------HHHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 32 LHSELV-GNQHLPDDQARKVL-----------------QLKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~~-----------------~~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
+|+++. |..||.+.+..... ++.+++.+|+..+|.+||++.+++.+
T Consensus 226 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 226 LWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 677776 67787654332221 27899999999999999999999864
No 323
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=97.19 E-value=0.0002 Score=47.05 Aligned_cols=45 Identities=20% Similarity=0.197 Sum_probs=33.3
Q ss_pred hhhhhc-CCCCCChhHHHH-----------------HHHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARK-----------------VLQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~-----------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||.+.+... ...+.+++.+||..+|.+||+++++..
T Consensus 194 l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 194 LTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 556676 788886533221 123899999999999999999998864
No 324
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.18 E-value=0.00021 Score=48.42 Aligned_cols=46 Identities=15% Similarity=0.218 Sum_probs=34.6
Q ss_pred hhhhhc-CCCCCChhHHHHHH-----------------HHHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 32 LHSELV-GNQHLPDDQARKVL-----------------QLKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~~-----------------~~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
+|++++ |..||...+..... ++.+++.+|+..+|.+||++.+++.+
T Consensus 232 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 232 LWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred HHHHHcCCCCCCCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 667776 67777654332221 38899999999999999999998763
No 325
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=97.17 E-value=0.00059 Score=44.90 Aligned_cols=46 Identities=7% Similarity=0.077 Sum_probs=34.0
Q ss_pred hhhhhc-CCCCCChhHHHH-----------------HHHHHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 32 LHSELV-GNQHLPDDQARK-----------------VLQLKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~-----------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
+|++++ |..||...+... ...+.+++.+|+..+|++||++.+++..
T Consensus 191 l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 191 MWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred HHHHhccCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 566776 678875432111 1238999999999999999999999863
No 326
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=97.15 E-value=0.00037 Score=45.73 Aligned_cols=45 Identities=16% Similarity=0.201 Sum_probs=34.0
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||...+.... ..+.+++++|+..+|.+||++.+++.
T Consensus 187 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 187 LWEVFSYGRAPYPKMSLKEVKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred HHHHHhCCCCCCccCCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 566776 7888865433221 23789999999999999999999875
No 327
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=97.12 E-value=0.00018 Score=47.27 Aligned_cols=45 Identities=22% Similarity=0.224 Sum_probs=33.5
Q ss_pred hhhhhcCCCCCChhHH--------------------HHHHHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELVGNQHLPDDQA--------------------RKVLQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~g~~p~~~~~~--------------------~~~~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
++++++|..||..+.. .....+.++|.+|+..+|.+||++.+++.
T Consensus 196 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 196 LYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred HHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 5678888888744211 11124899999999999999999998774
No 328
>KOG0590|consensus
Probab=97.11 E-value=0.00017 Score=54.48 Aligned_cols=30 Identities=30% Similarity=0.517 Sum_probs=28.7
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
.+.+|.+||+.||.+|.+++++++.+|+++
T Consensus 561 ~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~ 590 (601)
T KOG0590|consen 561 TRIIIYRMLQLDPTKRITIEQILNDEWIRS 590 (601)
T ss_pred HHHHHHHHccCChhheecHHHHhhChHhhh
Confidence 899999999999999999999999999975
No 329
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=97.10 E-value=0.00032 Score=47.82 Aligned_cols=46 Identities=13% Similarity=0.253 Sum_probs=34.6
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
+|++++ |..||.+...... .++.+++.+|+..||.+||++.+++.+
T Consensus 201 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 201 VWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 566665 8888865433221 137899999999999999999999864
No 330
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=97.10 E-value=0.0002 Score=49.65 Aligned_cols=46 Identities=11% Similarity=0.135 Sum_probs=34.1
Q ss_pred hhhhhc-CCCCCChhHH----H-H-------------HHHHHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 32 LHSELV-GNQHLPDDQA----R-K-------------VLQLKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~----~-~-------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
||++++ |..||..... . . ...+.+++.+|+..+|.+||++.+++.|
T Consensus 265 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 265 LWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred HHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 666776 8888854211 0 0 1237899999999999999999999875
No 331
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=97.09 E-value=0.00055 Score=45.27 Aligned_cols=46 Identities=15% Similarity=0.145 Sum_probs=34.0
Q ss_pred hhhhhhc-CCCCCChhHHHH-----------------HHHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 31 DLHSELV-GNQHLPDDQARK-----------------VLQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 31 ~L~~~l~-g~~p~~~~~~~~-----------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
.+|++++ |..||.+.+... ...+.+++.+|+..+|.+||++.+++.
T Consensus 200 ~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 200 VMWEVMSYGERPYWDMSNQDVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 4667665 888886532221 113789999999999999999999875
No 332
>KOG0668|consensus
Probab=97.08 E-value=0.00042 Score=47.82 Aligned_cols=30 Identities=40% Similarity=0.719 Sum_probs=28.5
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCcccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFIL 81 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~ 81 (84)
++.|||.++|.-|.+.|+||.|++.||||.
T Consensus 297 eaiDlldklLrYDHqeRlTakEam~HpyF~ 326 (338)
T KOG0668|consen 297 EAIDLLDKLLRYDHQERLTAKEAMAHPYFA 326 (338)
T ss_pred HHHHHHHHHHhhccccccchHHHhcCchHH
Confidence 489999999999999999999999999985
No 333
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=97.07 E-value=0.0003 Score=46.20 Aligned_cols=25 Identities=8% Similarity=0.100 Sum_probs=23.0
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
.+.+++.+|+..+|.+||++.+++.
T Consensus 230 ~~~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 230 PLYEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHH
Confidence 3889999999999999999999885
No 334
>KOG4279|consensus
Probab=97.06 E-value=0.0014 Score=51.20 Aligned_cols=66 Identities=18% Similarity=0.290 Sum_probs=45.2
Q ss_pred CCCceEEEecccCCCchhhh----hh-cC----CCCCChhHHHHHHHHHHHHHHHhccCcCCCCCHHHHhcCcccccC
Q psy17425 15 PSQEKIVTMSTIHPTRDLHS----EL-VG----NQHLPDDQARKVLQLKDLLDKILMLDTSKRLPINQALTHPFILEK 83 (84)
Q Consensus 15 ~~~~~~~~~~~~~p~~~L~~----~l-~g----~~p~~~~~~~~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~~ 83 (84)
.||+.+++.++.+|.-.|-. |. .| .+|.+.+ ...++++||.+|+..||..||++.++|..||++.+
T Consensus 764 ~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPee---lsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 764 FGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEE---LSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred ccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHH---HHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 36777777776666432211 11 12 1333332 44568999999999999999999999999998653
No 335
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=97.06 E-value=0.001 Score=44.44 Aligned_cols=25 Identities=16% Similarity=0.048 Sum_probs=22.9
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
.+.+||.+||..||.+||++.+++.
T Consensus 260 ~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 260 ELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHHHHHHHHcccCcccCCCHHHHHH
Confidence 4899999999999999999999874
No 336
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=97.05 E-value=0.00074 Score=45.16 Aligned_cols=25 Identities=12% Similarity=0.128 Sum_probs=23.0
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
++.+++.+||..||.+||++.+++.
T Consensus 268 ~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 268 DIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred HHHHHHHHHhccChhcCCCHHHHHH
Confidence 4899999999999999999999864
No 337
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=97.05 E-value=0.00038 Score=49.06 Aligned_cols=45 Identities=13% Similarity=0.181 Sum_probs=34.4
Q ss_pred hhhhhc-CCCCCChhHHHH------------------HHHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARK------------------VLQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||....... ..++++++.+|+..||.+||++.++.+
T Consensus 304 l~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 304 LWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred HHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 677775 888986532211 123899999999999999999999875
No 338
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=97.05 E-value=0.00029 Score=46.89 Aligned_cols=45 Identities=16% Similarity=0.261 Sum_probs=33.3
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||.......+ .++.+++.+|+..||.+||++.+++.
T Consensus 201 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 201 VWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 566666 7788765332211 12779999999999999999999884
No 339
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=97.04 E-value=0.0011 Score=43.29 Aligned_cols=45 Identities=9% Similarity=0.118 Sum_probs=33.5
Q ss_pred hhhhhc-CCCCCChhHHHH-----------------HHHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARK-----------------VLQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~-----------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||....... ..++.+++.+|+..+|.+||++.++..
T Consensus 184 l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 184 LWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred HHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 555666 777886532221 134899999999999999999999875
No 340
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=97.03 E-value=0.0011 Score=43.79 Aligned_cols=45 Identities=13% Similarity=0.158 Sum_probs=33.6
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||...+.... ..+.+++.+|+..+|..||+..+++.
T Consensus 200 l~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 200 MWEVMSFGERPYWDMSNHEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred HHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 566676 8888854332211 12789999999999999999999875
No 341
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=97.01 E-value=0.00076 Score=44.78 Aligned_cols=45 Identities=20% Similarity=0.327 Sum_probs=30.4
Q ss_pred hhhhhc-CCCCCChhHHHHHHH-----------------HHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKVLQ-----------------LKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~~~-----------------~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
++++++ |..|+.+.+...+.. +.++|..|+..||.+||++.+++.
T Consensus 195 l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 195 LYEILTLGKFPFSDYDNEEIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HHHHHTTSSGTTTTSCHHHHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred cccccccccccccccccccccccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 566777 567776533332221 899999999999999999999874
No 342
>KOG0595|consensus
Probab=97.01 E-value=0.00031 Score=50.95 Aligned_cols=79 Identities=19% Similarity=0.207 Sum_probs=63.9
Q ss_pred cceeeeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHHHHH-------------------HHHHHHHHhccC
Q psy17425 4 ISFKIINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARKVLQ-------------------LKDLLDKILMLD 64 (84)
Q Consensus 4 ~~f~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~~~~-------------------~~~Ll~~~L~~d 64 (84)
|+..|+.++.+..+........++-...||++++|++||...+..++.. ..+|+-..|.++
T Consensus 176 GSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~ 255 (429)
T KOG0595|consen 176 GSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRN 255 (429)
T ss_pred CCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcC
Confidence 6778888877766666666666666678999999999999766655543 679999999999
Q ss_pred cCCCCCHHHHhcCccccc
Q psy17425 65 TSKRLPINQALTHPFILE 82 (84)
Q Consensus 65 p~~R~s~~~~l~hp~~~~ 82 (84)
+..|.+..+.+.|+++..
T Consensus 256 ~~~~~~~~~~~~~~~l~~ 273 (429)
T KOG0595|consen 256 PKDRISFEDFFDHPFLAA 273 (429)
T ss_pred ccccCchHHhhhhhhccc
Confidence 999999999999998754
No 343
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=96.95 E-value=0.00044 Score=45.88 Aligned_cols=24 Identities=17% Similarity=0.181 Sum_probs=22.2
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+.+++.+|+..+|.+||++.+++.
T Consensus 237 ~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 237 LHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred HHHHHHHHcCCCchhCCCHHHHHH
Confidence 889999999999999999998874
No 344
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=96.95 E-value=0.00066 Score=44.94 Aligned_cols=25 Identities=12% Similarity=0.292 Sum_probs=23.2
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
+.+++.+||..+|.+||++.+++..
T Consensus 248 l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 248 LYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred HHHHHHHHcCCCcccCCCHHHHHHH
Confidence 7899999999999999999998863
No 345
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=96.95 E-value=0.00049 Score=48.44 Aligned_cols=26 Identities=19% Similarity=0.249 Sum_probs=23.6
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
+++++|.+|+..||.+||++.+++..
T Consensus 345 ~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 345 EMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred HHHHHHHHHccCChhHCcCHHHHHHH
Confidence 38899999999999999999999863
No 346
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=96.93 E-value=0.00072 Score=45.69 Aligned_cols=45 Identities=13% Similarity=0.154 Sum_probs=33.3
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||...+.... ..+++||.+||..+|.+||++.+++.
T Consensus 229 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~ 291 (304)
T cd05101 229 MWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVE 291 (304)
T ss_pred HHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 566665 6677764332221 23889999999999999999999885
No 347
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=96.92 E-value=0.00094 Score=44.93 Aligned_cols=24 Identities=17% Similarity=0.149 Sum_probs=22.3
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+.+|+.+|+..||.+||++++++.
T Consensus 268 l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 268 VFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHHHHcCCCchhCcCHHHHHH
Confidence 789999999999999999999864
No 348
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=96.92 E-value=0.00071 Score=45.26 Aligned_cols=45 Identities=13% Similarity=0.192 Sum_probs=33.8
Q ss_pred hhhhhc-CCCCCChhHHHHHH-----------------HHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKVL-----------------QLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~~-----------------~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||.+....... .+.+++.+|+..||.+|||+.+++.
T Consensus 201 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 201 VWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 566776 88888654332211 2778999999999999999999875
No 349
>KOG0192|consensus
Probab=96.91 E-value=0.0011 Score=47.35 Aligned_cols=74 Identities=14% Similarity=0.135 Sum_probs=54.9
Q ss_pred ccceeeeeecCCC--CCceEEEecccCCCchhhhhhcCCCCCChhHHHHHH------------------HHHHHHHHHhc
Q psy17425 3 LISFKIINFHFPP--SQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARKVL------------------QLKDLLDKILM 62 (84)
Q Consensus 3 ~~~f~~~~~d~~~--~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~~~------------------~~~~Ll~~~L~ 62 (84)
-|.+.+..++.+. +..........+-.-.|+++++|..||.+.....+. .+..|++.|..
T Consensus 205 ~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~ 284 (362)
T KOG0192|consen 205 AGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWL 284 (362)
T ss_pred CCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCC
Confidence 4667788888777 445555555555555688899999999875542222 18999999999
Q ss_pred cCcCCCCCHHHHhc
Q psy17425 63 LDTSKRLPINQALT 76 (84)
Q Consensus 63 ~dp~~R~s~~~~l~ 76 (84)
.||.+||+..+++.
T Consensus 285 ~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 285 VDPSRRPSFLEIVS 298 (362)
T ss_pred CCCCcCCCHHHHHH
Confidence 99999999988763
No 350
>KOG0600|consensus
Probab=96.91 E-value=0.002 Score=48.08 Aligned_cols=30 Identities=37% Similarity=0.493 Sum_probs=28.3
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
+.+|+..+|.+||.+|.||.++|.+.||+.
T Consensus 376 ~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t 405 (560)
T KOG0600|consen 376 ALDLLEKLLSLDPDKRGTASSALQSEYFTT 405 (560)
T ss_pred HHHHHHHHhccCccccccHHHHhcCccccc
Confidence 889999999999999999999999999953
No 351
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=96.89 E-value=0.00082 Score=44.46 Aligned_cols=45 Identities=13% Similarity=0.171 Sum_probs=33.0
Q ss_pred hhhhhc-CCCCCChhHHHH-----------------HHHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARK-----------------VLQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~-----------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|+++. |..||.+..... ...+.+++.+|+..+|.+||++.+++.
T Consensus 199 l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 199 MWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred HHHHhcCCCCCcccCCHHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 566564 888885432211 123799999999999999999999875
No 352
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=96.86 E-value=0.0016 Score=42.94 Aligned_cols=45 Identities=7% Similarity=0.106 Sum_probs=33.9
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||.+.+...+ ..+.+++.+|+..+|.+||++.+++.
T Consensus 205 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~ 267 (273)
T cd05074 205 MWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD 267 (273)
T ss_pred HHHHhhCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 566676 7778765433221 23799999999999999999999875
No 353
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=96.84 E-value=0.0012 Score=51.34 Aligned_cols=71 Identities=11% Similarity=0.041 Sum_probs=44.9
Q ss_pred eeeeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChh----------------------------------HHHHHH
Q psy17425 6 FKIINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDD----------------------------------QARKVL 51 (84)
Q Consensus 6 f~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~----------------------------------~~~~~~ 51 (84)
..|..++.+.+.........++-...+|++++|+.||..+ ......
T Consensus 842 ~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (968)
T PLN00113 842 SAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIV 921 (968)
T ss_pred ccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHH
Confidence 3455555554443333333333334578888998886421 012223
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
++.+++.+|+..||.+||++.++++
T Consensus 922 ~~~~l~~~Cl~~~P~~RPt~~evl~ 946 (968)
T PLN00113 922 EVMNLALHCTATDPTARPCANDVLK 946 (968)
T ss_pred HHHHHHHhhCcCCchhCcCHHHHHH
Confidence 4678999999999999999999875
No 354
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=96.81 E-value=0.0017 Score=43.47 Aligned_cols=25 Identities=20% Similarity=0.375 Sum_probs=23.3
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
+.++|.+|+..+|.+||++.+++.+
T Consensus 248 ~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 248 LATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred HHHHHHHHcccChhhCcCHHHHHHh
Confidence 7899999999999999999999864
No 355
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=96.79 E-value=0.0021 Score=42.77 Aligned_cols=45 Identities=16% Similarity=0.214 Sum_probs=34.0
Q ss_pred hhhhhc-CCCCCChhHHHHHH-----------------HHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKVL-----------------QLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~~-----------------~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||.......+. .+.+++.+|+..||.+||++.+++.
T Consensus 201 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 201 VWELMTFGAKPYEGIPAVEIPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred HHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 566676 88888764433222 2789999999999999999998764
No 356
>KOG0594|consensus
Probab=96.78 E-value=0.00079 Score=47.60 Aligned_cols=31 Identities=42% Similarity=0.653 Sum_probs=29.1
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
++.+++.+||+.+|.+|.|+..++.||||.+
T Consensus 277 ~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~ 307 (323)
T KOG0594|consen 277 DGIELLSKLLQYDPAKRISAKGALTHPYFSE 307 (323)
T ss_pred cHHHHHHHHhccCcccCcCHHHHhcChhhcc
Confidence 4789999999999999999999999999975
No 357
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=96.76 E-value=0.0012 Score=43.69 Aligned_cols=25 Identities=12% Similarity=0.195 Sum_probs=22.9
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
++.+++.+|+..+|.+||++.+++.
T Consensus 254 ~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 254 EVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred HHHHHHHHHhccChhhCCCHHHHHH
Confidence 4789999999999999999999875
No 358
>PHA02882 putative serine/threonine kinase; Provisional
Probab=96.73 E-value=0.00069 Score=45.85 Aligned_cols=46 Identities=4% Similarity=-0.034 Sum_probs=34.8
Q ss_pred hhhhhhcCCCCCChhHH-------------HHHH-----------HHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 31 DLHSELVGNQHLPDDQA-------------RKVL-----------QLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~-------------~~~~-----------~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
.+|++++|..||..... ..+. .+.++++.|+..+|++||+.+++.+
T Consensus 222 ~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 222 CMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred HHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 37888899999965411 0000 1789999999999999999998864
No 359
>KOG0662|consensus
Probab=96.69 E-value=0.0015 Score=43.80 Aligned_cols=31 Identities=32% Similarity=0.593 Sum_probs=29.3
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCcccccC
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILEK 83 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~~ 83 (84)
.+||++++|..+|..|++++.+++||||.+.
T Consensus 259 grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 259 GRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred hHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 7999999999999999999999999999863
No 360
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=96.62 E-value=0.0012 Score=43.57 Aligned_cols=45 Identities=7% Similarity=0.115 Sum_probs=33.7
Q ss_pred hhhhhc-CCCCCChhHHHH-----------------HHHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARK-----------------VLQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~-----------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||.+..... ..++.++|.+|+..||++||+..++.+
T Consensus 188 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 188 MWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred HHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 566675 888886533221 123789999999999999999998865
No 361
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=96.61 E-value=0.0033 Score=42.29 Aligned_cols=25 Identities=12% Similarity=0.109 Sum_probs=22.4
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
.+.+|+.+|+..||.+||++.++..
T Consensus 268 ~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 268 SLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHH
Confidence 3789999999999999999998864
No 362
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=96.59 E-value=0.0036 Score=41.44 Aligned_cols=23 Identities=9% Similarity=0.125 Sum_probs=20.3
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+.+++++|+ .+|.+|||++++..
T Consensus 243 ~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 243 WYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred HHHHHHHHh-cCcccCCCHHHHHH
Confidence 678999998 69999999999874
No 363
>KOG1035|consensus
Probab=96.58 E-value=0.0029 Score=51.26 Aligned_cols=29 Identities=24% Similarity=0.266 Sum_probs=27.2
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCcccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFIL 81 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~ 81 (84)
-..+|++||..||.+||||.++|++.|+.
T Consensus 847 e~slI~~Ll~hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 847 EASLIRWLLSHDPSKRPTATELLNSELLP 875 (1351)
T ss_pred HHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence 58999999999999999999999998875
No 364
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=96.56 E-value=0.0011 Score=45.92 Aligned_cols=26 Identities=12% Similarity=0.167 Sum_probs=23.8
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
.+.+++.+|+..||.+||++.+++.|
T Consensus 310 ~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 310 EMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHH
Confidence 37899999999999999999999875
No 365
>KOG0577|consensus
Probab=96.55 E-value=0.0029 Score=48.61 Aligned_cols=35 Identities=20% Similarity=0.278 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 48 RKVLQLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 48 ~~~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
.+...|++||..||+.-|..|||.+++|+|+|+..
T Consensus 249 eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R 283 (948)
T KOG0577|consen 249 EWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLR 283 (948)
T ss_pred hhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhcc
Confidence 34445999999999999999999999999999864
No 366
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=96.45 E-value=0.002 Score=46.08 Aligned_cols=24 Identities=17% Similarity=0.129 Sum_probs=21.9
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+.+++.+||..||++||+..++..
T Consensus 369 l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 369 VYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred HHHHHHHHCccCHhHCcCHHHHHH
Confidence 899999999999999999888764
No 367
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=96.45 E-value=0.002 Score=43.46 Aligned_cols=24 Identities=17% Similarity=0.149 Sum_probs=22.0
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHh
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQAL 75 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l 75 (84)
.+.+|+.+|+..||.+|||+.++.
T Consensus 276 ~~~~li~~cl~~~p~~RPs~~~i~ 299 (304)
T cd05096 276 GLYELMLQCWSRDCRERPSFSDIH 299 (304)
T ss_pred HHHHHHHHHccCCchhCcCHHHHH
Confidence 378999999999999999999984
No 368
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=96.41 E-value=0.0041 Score=41.41 Aligned_cols=25 Identities=8% Similarity=0.088 Sum_probs=23.1
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
.+.+++.+|+..||.+||++++++.
T Consensus 252 ~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 252 EVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred HHHHHHHHHhccChhhCCCHHHHHH
Confidence 4889999999999999999999875
No 369
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=96.40 E-value=0.0051 Score=41.63 Aligned_cols=45 Identities=13% Similarity=0.258 Sum_probs=33.0
Q ss_pred hhhhhc-CCCCCChhHHHHH-----------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSELV-GNQHLPDDQARKV-----------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~-----------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+|++++ |..||.+...... .++.+++.+|+..+|.+||++.+++.
T Consensus 201 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~ 263 (303)
T cd05110 201 IWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAA 263 (303)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 566665 7788865322211 23789999999999999999999875
No 370
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=96.31 E-value=0.0017 Score=43.33 Aligned_cols=26 Identities=19% Similarity=0.291 Sum_probs=23.7
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
.+.+|+.+||..||.+||++.+++.+
T Consensus 254 ~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 254 EVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred HHHHHHHHHccCCcccCcCHHHHHHH
Confidence 48899999999999999999999863
No 371
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=96.19 E-value=0.0063 Score=39.65 Aligned_cols=25 Identities=24% Similarity=0.428 Sum_probs=23.1
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
.+.++|.+|+..+|.+||++.+++.
T Consensus 232 ~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 232 ELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred HHHHHHHHHhccChhhCCCHHHHHH
Confidence 4889999999999999999999875
No 372
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=96.17 E-value=0.0023 Score=45.88 Aligned_cols=26 Identities=12% Similarity=0.121 Sum_probs=23.4
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
.+.+++.+|+..+|.+||++.+++..
T Consensus 370 ~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 370 EIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 47899999999999999999999863
No 373
>KOG1989|consensus
Probab=96.09 E-value=0.00098 Score=51.53 Aligned_cols=47 Identities=21% Similarity=0.167 Sum_probs=36.1
Q ss_pred hhhhhhcCCCCCChh-HH-------------HHHHHHHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 31 DLHSELVGNQHLPDD-QA-------------RKVLQLKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~-~~-------------~~~~~~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
-||.++..+.||.+. .. .....+++||..||+.||.+||.+.+++.+
T Consensus 247 lLYkLCy~t~PFe~sg~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 247 LLYKLCYFTTPFEESGKLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred HHHHHHHhCCCcCcCcceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 367777777888765 22 233349999999999999999999988764
No 374
>KOG0608|consensus
Probab=95.95 E-value=0.0021 Score=49.74 Aligned_cols=74 Identities=22% Similarity=0.196 Sum_probs=49.7
Q ss_pred eeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHHH----------H----------HHHHHHHHHhccCcCC
Q psy17425 8 IINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARKV----------L----------QLKDLLDKILMLDTSK 67 (84)
Q Consensus 8 ~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~~----------~----------~~~~Ll~~~L~~dp~~ 67 (84)
++.++.+...+..-.-.-+.-...||+|+.|.+||.++....+ . ++.+||.++ ..++++
T Consensus 837 yiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kL-c~sad~ 915 (1034)
T KOG0608|consen 837 YIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKL-CCSADS 915 (1034)
T ss_pred ccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHH-hcChhh
Confidence 3444444444444333334555579999999999976533211 1 288999885 589999
Q ss_pred CC---CHHHHhcCccccc
Q psy17425 68 RL---PINQALTHPFILE 82 (84)
Q Consensus 68 R~---s~~~~l~hp~~~~ 82 (84)
|. .++++..||||++
T Consensus 916 RLGkng~d~vKaHpfFkg 933 (1034)
T KOG0608|consen 916 RLGKNGADQVKAHPFFKG 933 (1034)
T ss_pred hhcccchhhhhcCccccc
Confidence 98 4678999999974
No 375
>KOG4721|consensus
Probab=95.93 E-value=0.0031 Score=48.32 Aligned_cols=72 Identities=15% Similarity=0.081 Sum_probs=59.4
Q ss_pred eeeeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHHHH------------------HHHHHHHHHhccCcCC
Q psy17425 6 FKIINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARKVL------------------QLKDLLDKILMLDTSK 67 (84)
Q Consensus 6 f~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~~~------------------~~~~Ll~~~L~~dp~~ 67 (84)
--++.++.+.+....+.+..++-...|.+||+|..||.+-+...+. -|+=||+.|+.-.|..
T Consensus 275 VaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRN 354 (904)
T KOG4721|consen 275 VAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRN 354 (904)
T ss_pred HhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCC
Confidence 3466788888888889998888888999999999999764332111 1899999999999999
Q ss_pred CCCHHHHhcC
Q psy17425 68 RLPINQALTH 77 (84)
Q Consensus 68 R~s~~~~l~h 77 (84)
||+..+++.|
T Consensus 355 RPSFrqil~H 364 (904)
T KOG4721|consen 355 RPSFRQILLH 364 (904)
T ss_pred CccHHHHHHH
Confidence 9999999987
No 376
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=95.75 E-value=0.018 Score=37.94 Aligned_cols=23 Identities=13% Similarity=0.173 Sum_probs=19.4
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+.+++..|+ .||.+||++++++.
T Consensus 243 ~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 243 WYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred HHHHHHHHh-cCcccccCHHHHHH
Confidence 567888887 59999999999875
No 377
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=95.63 E-value=0.0042 Score=49.30 Aligned_cols=46 Identities=24% Similarity=0.159 Sum_probs=33.9
Q ss_pred hhhhhhcCCCCCChhHHHH-------------------HHHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 31 DLHSELVGNQHLPDDQARK-------------------VLQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~-------------------~~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
.+|++++|..||...+... ...+.+++.+||..||++|++..+.+.
T Consensus 220 ILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl 284 (932)
T PRK13184 220 ILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELK 284 (932)
T ss_pred HHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 3788999999986543221 122789999999999999987666553
No 378
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=95.35 E-value=0.03 Score=37.08 Aligned_cols=23 Identities=17% Similarity=0.189 Sum_probs=20.0
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+.+++..|+ .+|.+||++.+++.
T Consensus 242 ~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 242 WYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred HHHHHHHHh-hCcccCCCHHHHHH
Confidence 678899998 78999999999864
No 379
>KOG0591|consensus
Probab=94.93 E-value=0.0099 Score=42.11 Aligned_cols=45 Identities=13% Similarity=0.110 Sum_probs=34.7
Q ss_pred CCCchhhhhhcCCCCCChhHHHHHHH------------------HHHHHHHHhccCcCCCCCH
Q psy17425 27 HPTRDLHSELVGNQHLPDDQARKVLQ------------------LKDLLDKILMLDTSKRLPI 71 (84)
Q Consensus 27 ~p~~~L~~~l~g~~p~~~~~~~~~~~------------------~~~Ll~~~L~~dp~~R~s~ 71 (84)
+-..-+|+|++-.+||.+++.-.+.. +..+|..|+..||..||+.
T Consensus 213 slGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 213 SLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred HHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCc
Confidence 33345789999889998765543332 8899999999999999974
No 380
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=94.82 E-value=0.032 Score=34.28 Aligned_cols=28 Identities=39% Similarity=0.523 Sum_probs=25.4
Q ss_pred HHHHHHHHHHhccCcCCCCCHHHHhcCc
Q psy17425 51 LQLKDLLDKILMLDTSKRLPINQALTHP 78 (84)
Q Consensus 51 ~~~~~Ll~~~L~~dp~~R~s~~~~l~hp 78 (84)
..+.+++.+|+..||.+|+++.++++++
T Consensus 188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 3589999999999999999999999874
No 381
>KOG0603|consensus
Probab=94.81 E-value=0.02 Score=43.63 Aligned_cols=77 Identities=12% Similarity=0.157 Sum_probs=51.6
Q ss_pred cceeeeeecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHHHHH------------HHHHHHHHhccCcCCCCCH
Q psy17425 4 ISFKIINFHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARKVLQ------------LKDLLDKILMLDTSKRLPI 71 (84)
Q Consensus 4 ~~f~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~~~~------------~~~Ll~~~L~~dp~~R~s~ 71 (84)
|+..++.++.++ ++.....-+.-....|++++|..||..+..+.+.. +++++..++..+|.+|..+
T Consensus 155 gt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~~~~~Il~~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 155 GTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGDTMKRILKAELEMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred cchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchHHHHHHhhhccCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 355566666554 12222111111223799999999998855544443 8999999999999999854
Q ss_pred -----HHHhcCccccc
Q psy17425 72 -----NQALTHPFILE 82 (84)
Q Consensus 72 -----~~~l~hp~~~~ 82 (84)
.++.+|+|+..
T Consensus 233 ~~~~~~eik~h~f~~~ 248 (612)
T KOG0603|consen 233 GPDGVDEIKQHEFFQS 248 (612)
T ss_pred CcchhHHHhccchhee
Confidence 78889999853
No 382
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=94.69 E-value=0.026 Score=37.47 Aligned_cols=25 Identities=12% Similarity=0.183 Sum_probs=23.1
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
.+.+|+.+|+..+|.+|||+.+++.
T Consensus 254 ~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 254 EIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred HHHHHHHHHccCChhhCCCHHHHHH
Confidence 4899999999999999999999875
No 383
>KOG1006|consensus
Probab=94.66 E-value=0.055 Score=38.22 Aligned_cols=33 Identities=18% Similarity=0.295 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhccCcCCCCCHHHHhcCcccccC
Q psy17425 51 LQLKDLLDKILMLDTSKRLPINQALTHPFILEK 83 (84)
Q Consensus 51 ~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~~ 83 (84)
..++.+|..||.+|-..||.-.+++.+||++.+
T Consensus 301 ~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y 333 (361)
T KOG1006|consen 301 FSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMY 333 (361)
T ss_pred HHHHHHHHHHhhcccccCcchhhhhcCchhhhh
Confidence 348999999999999999999999999998643
No 384
>KOG0606|consensus
Probab=93.81 E-value=0.047 Score=44.16 Aligned_cols=52 Identities=23% Similarity=0.255 Sum_probs=42.9
Q ss_pred hhhhhhcCCCCCChhHHHHHHH-------------------HHHHHHHHhccCcCCCC---CHHHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQARKVLQ-------------------LKDLLDKILMLDTSKRL---PINQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~~~~-------------------~~~Ll~~~L~~dp~~R~---s~~~~l~hp~~~~ 82 (84)
.+|+.+.|+.||.++..+++.. ++++|+++|+.+|..|. ++-++.+|+||+.
T Consensus 247 IlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~ 320 (1205)
T KOG0606|consen 247 ILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQL 320 (1205)
T ss_pred HHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceee
Confidence 4788899999999886665543 99999999999999998 4667778999863
No 385
>KOG0193|consensus
Probab=91.37 E-value=0.13 Score=39.45 Aligned_cols=46 Identities=20% Similarity=0.195 Sum_probs=36.5
Q ss_pred hhhhhhcCCCCCChhHHHHH---------------------HHHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 31 DLHSELVGNQHLPDDQARKV---------------------LQLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~~~~---------------------~~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
.+|++++|..||...+...+ .+.++|+..|+..+++.||...+++.
T Consensus 582 V~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 582 VWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred HHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 58999999999974433211 13899999999999999999888875
No 386
>KOG0606|consensus
Probab=88.98 E-value=0.28 Score=40.00 Aligned_cols=72 Identities=15% Similarity=0.261 Sum_probs=51.9
Q ss_pred ecCCCCCceEEEecccCCCchhhhhhcCCCCCChhHHHHHHH-------------------HHHHHHHHhccCcCCCCCH
Q psy17425 11 FHFPPSQEKIVTMSTIHPTRDLHSELVGNQHLPDDQARKVLQ-------------------LKDLLDKILMLDTSKRLPI 71 (84)
Q Consensus 11 ~d~~~~~~~~~~~~~~~p~~~L~~~l~g~~p~~~~~~~~~~~-------------------~~~Ll~~~L~~dp~~R~s~ 71 (84)
+....|..+.....-+.....+++.++|.+||.++....+.+ +++++.+.|..++.+|..+
T Consensus 1004 Pe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a 1083 (1205)
T KOG0606|consen 1004 PEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGA 1083 (1205)
T ss_pred CcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCc
Confidence 333344444333333344456888899999998876655544 8999999999999999987
Q ss_pred H---HHhcCccccc
Q psy17425 72 N---QALTHPFILE 82 (84)
Q Consensus 72 ~---~~l~hp~~~~ 82 (84)
. +.-.|+|++.
T Consensus 1084 ~~~~e~k~~~~~~~ 1097 (1205)
T KOG0606|consen 1084 KGAAEVKGHPFFQD 1097 (1205)
T ss_pred ccccccccCCccCC
Confidence 7 7788999864
No 387
>KOG1151|consensus
Probab=88.31 E-value=1.1 Score=33.96 Aligned_cols=52 Identities=19% Similarity=0.401 Sum_probs=40.5
Q ss_pred hhhhhhcCCCCCChhHH-HHHH---------------------HHHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 31 DLHSELVGNQHLPDDQA-RKVL---------------------QLKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~-~~~~---------------------~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
-+|.-+.|..||..... ..+. ++++||++||..--+.|....++..|||+..
T Consensus 673 IFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 673 IFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP 746 (775)
T ss_pred hhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence 46777788889865322 1122 2999999999999999999999999999853
No 388
>KOG0197|consensus
Probab=87.98 E-value=1.1 Score=33.44 Aligned_cols=44 Identities=18% Similarity=0.249 Sum_probs=31.6
Q ss_pred hhhhhc-CCCCCChhHHHHHHH-----------------HHHHHHHHhccCcCCCCCHHHHh
Q psy17425 32 LHSELV-GNQHLPDDQARKVLQ-----------------LKDLLDKILMLDTSKRLPINQAL 75 (84)
Q Consensus 32 L~~~l~-g~~p~~~~~~~~~~~-----------------~~~Ll~~~L~~dp~~R~s~~~~l 75 (84)
|+++.+ |..|++.-...++.+ +.+++..|...+|++|||.+.+.
T Consensus 394 L~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 394 LWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred HHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 555554 667776644433332 88999999999999999987654
No 389
>KOG0695|consensus
Probab=86.47 E-value=0.16 Score=37.08 Aligned_cols=51 Identities=20% Similarity=0.307 Sum_probs=37.3
Q ss_pred hhhhhhcCCCCCC-------hhHHH-HHHH----------------HHHHHHHHhccCcCCCCC------HHHHhcCccc
Q psy17425 31 DLHSELVGNQHLP-------DDQAR-KVLQ----------------LKDLLDKILMLDTSKRLP------INQALTHPFI 80 (84)
Q Consensus 31 ~L~~~l~g~~p~~-------~~~~~-~~~~----------------~~~Ll~~~L~~dp~~R~s------~~~~l~hp~~ 80 (84)
-+++|++|..||+ +.+.+ .+.+ +...|+..|.+||..|.. ..++..|+||
T Consensus 440 lmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ff 519 (593)
T KOG0695|consen 440 LMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFF 519 (593)
T ss_pred HHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhh
Confidence 4789999999995 12221 1111 778889999999999986 4678889998
Q ss_pred c
Q psy17425 81 L 81 (84)
Q Consensus 81 ~ 81 (84)
+
T Consensus 520 r 520 (593)
T KOG0695|consen 520 R 520 (593)
T ss_pred h
Confidence 5
No 390
>KOG1095|consensus
Probab=86.45 E-value=1.1 Score=36.53 Aligned_cols=45 Identities=20% Similarity=0.251 Sum_probs=35.0
Q ss_pred hhhhh-cCCCCCChhHHHHHHH-----------------HHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 32 LHSEL-VGNQHLPDDQARKVLQ-----------------LKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 32 L~~~l-~g~~p~~~~~~~~~~~-----------------~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
|++.+ .|..||++-+..++.. +.+++.+|+..+|+.||+...+++
T Consensus 894 lWEifslG~~PY~~~~n~~v~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 894 LWEIFSLGATPYPSRSNFEVLLDVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred HHHHHhCCCCCCCCcchHHHHHHHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 45555 4678998765554443 789999999999999999988875
No 391
>KOG0664|consensus
Probab=84.09 E-value=1.1 Score=32.05 Aligned_cols=30 Identities=40% Similarity=0.708 Sum_probs=27.5
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
..+++..+|..||++|++..+++.|++..+
T Consensus 319 av~~~~~~l~~d~dkris~~~A~~~~~~~e 348 (449)
T KOG0664|consen 319 AVDLLQKLLHFDPDKRISVEEALQHRYLEE 348 (449)
T ss_pred HHHHHHHHhCCCCcccccHhhhcccccccc
Confidence 678999999999999999999999998754
No 392
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=79.25 E-value=0.64 Score=32.54 Aligned_cols=38 Identities=16% Similarity=0.100 Sum_probs=25.4
Q ss_pred hhhhhhcCCCCCChhHH------------HHHHHHHHHHHHHhccCcCCC
Q psy17425 31 DLHSELVGNQHLPDDQA------------RKVLQLKDLLDKILMLDTSKR 68 (84)
Q Consensus 31 ~L~~~l~g~~p~~~~~~------------~~~~~~~~Ll~~~L~~dp~~R 68 (84)
.+|.+.|+..||.-... ......++||.++|..||.+|
T Consensus 239 ~ly~lWC~~lPf~~~~~~~~~~~~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 239 TLYSLWCGRLPFGLSSPEADPEWDFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHHSS-STCCCGGGSTSGGGGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHHHccCCCCCCCccccccccchhcCCcCHHHHHHHHHHccCCcccC
Confidence 47888899988862111 122348999999999999987
No 393
>KOG1033|consensus
Probab=78.49 E-value=0.96 Score=34.12 Aligned_cols=78 Identities=13% Similarity=0.103 Sum_probs=46.6
Q ss_pred ccceeeeeecCCCCCceEEEecccCCCchhhhhhcC-CCC--------------CChhHHHHHHHHHHHHHHHhccCcCC
Q psy17425 3 LISFKIINFHFPPSQEKIVTMSTIHPTRDLHSELVG-NQH--------------LPDDQARKVLQLKDLLDKILMLDTSK 67 (84)
Q Consensus 3 ~~~f~~~~~d~~~~~~~~~~~~~~~p~~~L~~~l~g-~~p--------------~~~~~~~~~~~~~~Ll~~~L~~dp~~ 67 (84)
+|.-.|..++++.|+.....+....-.--|++++.- ..+ ++.+....-.+-.+||.++|...|.+
T Consensus 423 ~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r~g~ip~~~~~d~p~e~~ll~~lls~~p~~ 502 (516)
T KOG1033|consen 423 VGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIRDGIIPPEFLQDYPEEYTLLQQLLSPSPEE 502 (516)
T ss_pred ccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhhcCCCChHHhhcCcHHHHHHHHhcCCCccc
Confidence 344556667777777666665544444445555541 111 11111111112579999999999999
Q ss_pred CCCHHHHhcCccc
Q psy17425 68 RLPINQALTHPFI 80 (84)
Q Consensus 68 R~s~~~~l~hp~~ 80 (84)
||++.+.-.|.|.
T Consensus 503 RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 503 RPSAIEVALHEFL 515 (516)
T ss_pred CchHHHHhhhhhc
Confidence 9988777777765
No 394
>KOG1026|consensus
Probab=78.34 E-value=3.3 Score=32.81 Aligned_cols=23 Identities=9% Similarity=0.091 Sum_probs=21.5
Q ss_pred HHHHHHHHhccCcCCCCCHHHHh
Q psy17425 53 LKDLLDKILMLDTSKRLPINQAL 75 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l 75 (84)
+.+|+..|...+|++||+..||-
T Consensus 734 vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 734 VYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred HHHHHHHHhhcCcccCCCHHHHH
Confidence 89999999999999999998875
No 395
>KOG0200|consensus
Probab=74.63 E-value=6.3 Score=30.09 Aligned_cols=24 Identities=17% Similarity=0.299 Sum_probs=21.3
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+.++++.|...+|++||+..++..
T Consensus 551 iY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 551 IYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred HHHHHHHHhCCCcccCCCHHHHHH
Confidence 789999999999999999887653
No 396
>KOG1266|consensus
Probab=74.03 E-value=1.1 Score=32.79 Aligned_cols=28 Identities=21% Similarity=0.273 Sum_probs=25.7
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
-++++.+||.-.|..||++.+++.||-+
T Consensus 307 qr~~i~kcl~~eP~~rp~ar~llfHpll 334 (458)
T KOG1266|consen 307 QRGSITKCLEGEPNGRPDARLLLFHPLL 334 (458)
T ss_pred ccCcCcccccCCCCCCcchhhhhcCcee
Confidence 4788999999999999999999999975
No 397
>KOG1240|consensus
Probab=72.68 E-value=1.9 Score=35.82 Aligned_cols=25 Identities=32% Similarity=0.489 Sum_probs=23.4
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcC
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTH 77 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~h 77 (84)
.++||..|+++||.+|.+|++.|+.
T Consensus 267 ~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 267 LRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHHHHHHHHccCchhccCHHHHHHh
Confidence 8999999999999999999998864
No 398
>KOG4278|consensus
Probab=67.31 E-value=10 Score=30.28 Aligned_cols=39 Identities=15% Similarity=0.167 Sum_probs=31.1
Q ss_pred cCCCCCChhHHHHHHH-----------------HHHHHHHHhccCcCCCCCHHHHh
Q psy17425 37 VGNQHLPDDQARKVLQ-----------------LKDLLDKILMLDTSKRLPINQAL 75 (84)
Q Consensus 37 ~g~~p~~~~~~~~~~~-----------------~~~Ll~~~L~~dp~~R~s~~~~l 75 (84)
.|-.|+++-+...++. ...|+..|...+|..||+..|+-
T Consensus 462 YGMsPYPGidlSqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiH 517 (1157)
T KOG4278|consen 462 YGMSPYPGIDLSQVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIH 517 (1157)
T ss_pred cCCCCCCCccHHHHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHH
Confidence 3567888766655553 78999999999999999988874
No 399
>KOG1094|consensus
Probab=64.60 E-value=7.6 Score=30.52 Aligned_cols=24 Identities=17% Similarity=0.187 Sum_probs=21.7
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
+.+|+.+|..++..+||+.+++-.
T Consensus 776 lyelml~Cw~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 776 LYELMLRCWRRESEQRPSFEQLHL 799 (807)
T ss_pred HHHHHHHHhchhhhcCCCHHHHHH
Confidence 789999999999999999988754
No 400
>KOG1024|consensus
Probab=58.79 E-value=19 Score=27.20 Aligned_cols=39 Identities=13% Similarity=0.123 Sum_probs=28.7
Q ss_pred cCCCCCChhHHHHHHH-----------------HHHHHHHHhccCcCCCCCHHHHh
Q psy17425 37 VGNQHLPDDQARKVLQ-----------------LKDLLDKILMLDTSKRLPINQAL 75 (84)
Q Consensus 37 ~g~~p~~~~~~~~~~~-----------------~~~Ll~~~L~~dp~~R~s~~~~l 75 (84)
.|+.|+.+-++.+... +...+..|...+|+.||+.+++.
T Consensus 494 lg~~PyaeIDPfEm~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv 549 (563)
T KOG1024|consen 494 LGKLPYAEIDPFEMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLV 549 (563)
T ss_pred cCCCCccccCHHHHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHH
Confidence 4667776655544432 66778889999999999988865
No 401
>KOG4158|consensus
Probab=57.25 E-value=7.9 Score=29.22 Aligned_cols=21 Identities=33% Similarity=0.379 Sum_probs=19.0
Q ss_pred HHHHHHHHhccCcCCCCCHHH
Q psy17425 53 LKDLLDKILMLDTSKRLPINQ 73 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~ 73 (84)
+++|+..+|..||.+|++++-
T Consensus 486 ~rqlV~~lL~r~pskRvsp~i 506 (598)
T KOG4158|consen 486 ARQLVFDLLKRDPSKRVSPNI 506 (598)
T ss_pred HHHHHHHHhcCCccccCCccH
Confidence 899999999999999998643
No 402
>KOG0194|consensus
Probab=56.76 E-value=18 Score=27.24 Aligned_cols=24 Identities=13% Similarity=0.196 Sum_probs=20.9
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
...++++|...||.+|++..++.+
T Consensus 392 ~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 392 LAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred HHHHHHHhccCChhhccCHHHHHH
Confidence 678888999999999999887753
No 403
>cd00059 FH Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as monomers, are also found in the Hepatocyte nuclear factor (HNF) proteins, which provide tissue-specific gene regulation. The structure contains 2 flexible loops or "wings" in the C-terminal region, hence the term winged helix.
Probab=52.26 E-value=20 Score=20.17 Aligned_cols=30 Identities=17% Similarity=0.394 Sum_probs=24.3
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhc-----Cccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALT-----HPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~-----hp~~~~ 82 (84)
...||...+.-.|.++.|..||-. .||++.
T Consensus 6 Y~~LI~~Ai~~sp~~~lTL~eIy~~I~~~~pyyr~ 40 (78)
T cd00059 6 YSALIAMAIQSSPEKRLTLSEIYKWISDNFPYFRD 40 (78)
T ss_pred HHHHHHHHHHhCCCCCeeHHHHHHHHHHhCCcccc
Confidence 357888888899999999999875 677653
No 404
>KOG0590|consensus
Probab=48.68 E-value=4.8 Score=30.86 Aligned_cols=30 Identities=33% Similarity=0.444 Sum_probs=28.0
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
..+++.+++..+|..|.+.+++..++|+..
T Consensus 262 ~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 262 AHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred hhhcccccccCCchhccccccccccccccc
Confidence 789999999999999999999999999875
No 405
>KOG0199|consensus
Probab=46.33 E-value=36 Score=27.62 Aligned_cols=23 Identities=4% Similarity=0.135 Sum_probs=21.0
Q ss_pred HHHHHHHHhccCcCCCCCHHHHh
Q psy17425 53 LKDLLDKILMLDTSKRLPINQAL 75 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l 75 (84)
+.+++..|...+|..||+...+-
T Consensus 344 IY~imk~cWah~paDRptFsair 366 (1039)
T KOG0199|consen 344 IYQIMKNCWAHNPADRPTFSAIR 366 (1039)
T ss_pred HHHHHHHhccCCccccccHHHHH
Confidence 78999999999999999988774
No 406
>KOG1025|consensus
Probab=45.12 E-value=37 Score=28.08 Aligned_cols=24 Identities=17% Similarity=0.228 Sum_probs=20.4
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
..-++-+|+..|+..||+..++-.
T Consensus 929 Vy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 929 VYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred HHHHHHHHhccCcccCccHHHHHH
Confidence 677888899999999999887653
No 407
>KOG1187|consensus
Probab=38.73 E-value=49 Score=23.68 Aligned_cols=27 Identities=26% Similarity=0.338 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHhccCcCCCCCHHHHh
Q psy17425 49 KVLQLKDLLDKILMLDTSKRLPINQAL 75 (84)
Q Consensus 49 ~~~~~~~Ll~~~L~~dp~~R~s~~~~l 75 (84)
....+..+-.+|+..+|..||+..++.
T Consensus 320 ~~~~~~~~a~~C~~~~~~~RP~m~~Vv 346 (361)
T KOG1187|consen 320 EVKKLAELALRCLRPDPKERPTMSQVV 346 (361)
T ss_pred HHHHHHHHHHHHcCcCCCcCcCHHHHH
Confidence 444577888899999999999998864
No 408
>KOG0195|consensus
Probab=36.83 E-value=29 Score=25.09 Aligned_cols=22 Identities=18% Similarity=0.294 Sum_probs=19.1
Q ss_pred HHHHHHHHhccCcCCCCCHHHH
Q psy17425 53 LKDLLDKILMLDTSKRLPINQA 74 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~ 74 (84)
...|++-|+.-||.+||..+.+
T Consensus 418 m~klm~icmnedpgkrpkfdmi 439 (448)
T KOG0195|consen 418 MNKLMNICMNEDPGKRPKFDMI 439 (448)
T ss_pred HHHHHHHHhcCCCCcCCCccee
Confidence 7899999999999999976543
No 409
>PRK13378 protocatechuate 4,5-dioxygenase subunit alpha; Provisional
Probab=28.68 E-value=29 Score=21.32 Aligned_cols=37 Identities=19% Similarity=0.187 Sum_probs=28.3
Q ss_pred hhhhcCCCCCChhHHHHHHHHHHHHHHHhccCcCCCC
Q psy17425 33 HSELVGNQHLPDDQARKVLQLKDLLDKILMLDTSKRL 69 (84)
Q Consensus 33 ~~~l~g~~p~~~~~~~~~~~~~~Ll~~~L~~dp~~R~ 69 (84)
|.-+-|+.+|+.+..+.-+.+.+++.++...+-..|.
T Consensus 7 ~~~ipGT~~Fd~~~srkgY~LN~fc~sl~~~~nRe~F 43 (117)
T PRK13378 7 KREIPGTTIFDGEQARKGYALNKMCFSFNDAANRAAF 43 (117)
T ss_pred cccCCCCcCcCHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 5567899999999998888888888887655444443
No 410
>KOG4257|consensus
Probab=28.52 E-value=58 Score=26.24 Aligned_cols=23 Identities=26% Similarity=0.297 Sum_probs=20.5
Q ss_pred HHHHHHHHhccCcCCCCCHHHHh
Q psy17425 53 LKDLLDKILMLDTSKRLPINQAL 75 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l 75 (84)
+..|..+|...+|.+||...++-
T Consensus 621 LYslmskcWayeP~kRPrftei~ 643 (974)
T KOG4257|consen 621 LYSLMSKCWAYEPSKRPRFTEIK 643 (974)
T ss_pred HHHHHHHHhccCcccCCcHHHHH
Confidence 67999999999999999987764
No 411
>COG4536 CorB Putative Mg2+ and Co2+ transporter CorB [Inorganic ion transport and metabolism]
Probab=28.49 E-value=95 Score=23.14 Aligned_cols=68 Identities=19% Similarity=0.290 Sum_probs=46.7
Q ss_pred CCCCceEEEecccCCCchhhhhhcC----CCCCChhHHHH---HHHHHHHHHHHhccCcCCCCCHHHHhcCcccc
Q psy17425 14 PPSQEKIVTMSTIHPTRDLHSELVG----NQHLPDDQARK---VLQLKDLLDKILMLDTSKRLPINQALTHPFIL 81 (84)
Q Consensus 14 ~~~~~~~~~~~~~~p~~~L~~~l~g----~~p~~~~~~~~---~~~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~ 81 (84)
-..++....+.--.||+.++..+.. ..|...++... +.+.+++++.+.+.+-..+.....++.-|||-
T Consensus 206 MvpR~~i~~id~d~~~e~iv~ql~~s~HtRiplyr~~~DnIiGvlh~r~llr~l~e~~~~~k~d~~~~a~epyFV 280 (423)
T COG4536 206 MVPRNEIIGIDIDDPWEEIVRQLLHSPHTRIPLYRDDLDNIIGVLHVRDLLRLLNEKNEFTKEDILRAADEPYFV 280 (423)
T ss_pred eccccceeeecCCCCHHHHHHHHhhCCCCceeeecCChhHhhhhhhHHHHHHHhhccCcccHhHHHHHhcCCeec
Confidence 3445556666666788877776643 23544443333 44589999999988877778888888999984
No 412
>KOG1035|consensus
Probab=28.13 E-value=33 Score=29.08 Aligned_cols=30 Identities=43% Similarity=0.514 Sum_probs=27.1
Q ss_pred HHHHHHHHhccCcCCCCCHHHHhcCccccc
Q psy17425 53 LKDLLDKILMLDTSKRLPINQALTHPFILE 82 (84)
Q Consensus 53 ~~~Ll~~~L~~dp~~R~s~~~~l~hp~~~~ 82 (84)
..+++.+|+.-++++|+++.+++.|+|.+.
T Consensus 410 ~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~ 439 (1351)
T KOG1035|consen 410 LLDALPKCLDEDSEERLSALELLTHPFLRF 439 (1351)
T ss_pred hhhhhhhhcchhhhhccchhhhhhchhccc
Confidence 578888999999999999999999999864
No 413
>PRK13377 protocatechuate 4,5-dioxygenase subunit alpha; Provisional
Probab=26.44 E-value=32 Score=21.45 Aligned_cols=37 Identities=16% Similarity=0.300 Sum_probs=28.6
Q ss_pred hhhhcCCCCCChhHHHHHHHHHHHHHHHhccCcCCCC
Q psy17425 33 HSELVGNQHLPDDQARKVLQLKDLLDKILMLDTSKRL 69 (84)
Q Consensus 33 ~~~l~g~~p~~~~~~~~~~~~~~Ll~~~L~~dp~~R~ 69 (84)
|+-+-|+.+|+.+..+.-+.+.+++.++...+-..|.
T Consensus 7 ~~~ipGTy~Fd~~~srkgY~LN~fc~sL~~~~nRerF 43 (129)
T PRK13377 7 YLDIPGTTIFDADMSRKGYHLNQFCMSLMKAENRERF 43 (129)
T ss_pred cccCCCCcccCHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 5667899999999998888888888887655554444
No 414
>TIGR02792 PCA_ligA protocatechuate 4,5-dioxygenase, alpha subunit. Protocatechuate (PCA) 4,5-dioxygenase is the first enzyme in the PCA 4,5-cleavage pathway that is an alternative to PCA 3,4-cleavage and PCA 2,3 cleavage pathways. PCA is an intermediate in the breakdown of lignin (hence the gene symbol ligA) and other compounds. Members of this family are the alpha chain of PCA 4,5-dioxygenase, or the equivalent domain of a fusion protein.
Probab=24.26 E-value=36 Score=20.88 Aligned_cols=35 Identities=20% Similarity=0.369 Sum_probs=26.4
Q ss_pred hhcCCCCCChhHHHHHHHHHHHHHHHhccCcCCCC
Q psy17425 35 ELVGNQHLPDDQARKVLQLKDLLDKILMLDTSKRL 69 (84)
Q Consensus 35 ~l~g~~p~~~~~~~~~~~~~~Ll~~~L~~dp~~R~ 69 (84)
-+-|+.+|+.+..+.-+.+.+++.++...+-..|.
T Consensus 3 dipGT~~Fd~~~srkgy~LN~fc~sl~~~~nRerF 37 (117)
T TIGR02792 3 DVPGTRIFDAQQARKGYNLNQFCMSLMKAENRERF 37 (117)
T ss_pred CCCCCcccCHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 45788999999888888888888887655544444
No 415
>cd07924 PCA_45_Doxase_A The A subunit of Protocatechuate 4,5-dioxygenase (LigAB) is the smaller, non-catalytic subunit. The A subunit is the non-catalytic subunit of Protocatechuate (PCA) 4,5-dioxygenase (LigAB), which is composed of A and B subunits that form a tetramer. PCA 4,5-dioxygenase catalyzes the oxidization and subsequent ring-opening of PCA (or 3,4-dihydroxybenzoic acid), which is an intermediate in the breakdown of lignin and other compounds. PCA 4,5-dioxygenase is one of the aromatic ring opening dioxygenases which play key roles in the degradation of aromatic compounds. As a member of the Class III extradiol dioxygenase family, LigAB uses a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon.
Probab=23.52 E-value=39 Score=20.87 Aligned_cols=37 Identities=16% Similarity=0.326 Sum_probs=27.9
Q ss_pred hhhhcCCCCCChhHHHHHHHHHHHHHHHhccCcCCCC
Q psy17425 33 HSELVGNQHLPDDQARKVLQLKDLLDKILMLDTSKRL 69 (84)
Q Consensus 33 ~~~l~g~~p~~~~~~~~~~~~~~Ll~~~L~~dp~~R~ 69 (84)
|.-+-|+.+|+.+..+.-+.+.+++.++...+-..|.
T Consensus 4 ~~~ipGTy~Fd~~~srkgy~LN~fc~sl~~~~nRerF 40 (121)
T cd07924 4 YDDIPGTYVFDAERARKGYHLNQFCMSLMKAENRERF 40 (121)
T ss_pred cccCCCCcccCHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 4567899999999988888888888887655544444
No 416
>KOG1023|consensus
Probab=23.35 E-value=69 Score=24.28 Aligned_cols=25 Identities=24% Similarity=0.133 Sum_probs=21.7
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALT 76 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~ 76 (84)
....+++.|..-+|..||+..++-.
T Consensus 195 ~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 195 ELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred HHHHHHHHhcccChhhCccHHHHHh
Confidence 3788999999999999999887653
No 417
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=23.09 E-value=89 Score=19.67 Aligned_cols=29 Identities=34% Similarity=0.558 Sum_probs=24.6
Q ss_pred HHHHHHHHHhccCcCCCCCHHHHhcCccc
Q psy17425 52 QLKDLLDKILMLDTSKRLPINQALTHPFI 80 (84)
Q Consensus 52 ~~~~Ll~~~L~~dp~~R~s~~~~l~hp~~ 80 (84)
.+.+++..++..+|..|.+..+...+++.
T Consensus 250 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 278 (384)
T COG0515 250 AASDLLKKLLAKDPKNRLSSSSDLSHDLL 278 (384)
T ss_pred HHHHHHHHHHhcCchhcCCHHHHhhchHh
Confidence 36899999999999999999888777554
No 418
>smart00339 FH FORKHEAD. FORKHEAD, also known as a "winged helix"
Probab=22.01 E-value=98 Score=17.73 Aligned_cols=29 Identities=21% Similarity=0.420 Sum_probs=23.1
Q ss_pred HHHHHHHhccCcCCCCCHHHHhc-----Cccccc
Q psy17425 54 KDLLDKILMLDTSKRLPINQALT-----HPFILE 82 (84)
Q Consensus 54 ~~Ll~~~L~~dp~~R~s~~~~l~-----hp~~~~ 82 (84)
..||...+.-.|.++.|+.+|.. .||++.
T Consensus 7 ~~lI~~ai~~sp~~~ltl~~Iy~~I~~~~pyy~~ 40 (89)
T smart00339 7 IALIAMAILSSPDKRLTLSEIYKWIEDNFPYYRE 40 (89)
T ss_pred HHHHHHHHHhCCCCCeeHHHHHHHHHHhCchhhc
Confidence 57888888889999999999874 566653
No 419
>cd07921 PCA_45_Doxase_A_like Subunit A of the Class III Extradiol dioxygenase, Protocatechuate 4,5-dioxygenase, and similar enzymes. This subfamily includes the A subunit of protocatechuate (PCA) 4,5-dioxygenase (LigAB) and two subfamilies of unknown function. The A subunit is the smaller, non-catalytic subunit of LigAB. PCA 4,5-dioxygenase catalyzes the oxidization and subsequent ring-opening of PCA (or 3,4-dihydroxybenzoic acid), which is an intermediate in the breakdown of lignin and other compounds. PCA 4,5-dioxygenase is one of the aromatic ring opening dioxygenases which play key roles in the degradation of aromatic compounds. As members of the Class III extradiol dioxygenase family, the enzymes use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. LigAB-like class III enzymes are usually composed of two subunits, designated A and B, which form a tetramer composed of two copies of each subunit.
Probab=20.26 E-value=87 Score=18.88 Aligned_cols=29 Identities=17% Similarity=0.282 Sum_probs=20.9
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhccCcCCC
Q psy17425 38 GNQHLPDDQARKVLQLKDLLDKILMLDTSKR 68 (84)
Q Consensus 38 g~~p~~~~~~~~~~~~~~Ll~~~L~~dp~~R 68 (84)
|+.||+.+..+.-+.+.+|+.++. +|..|
T Consensus 1 GT~~Fd~~~s~kgy~LN~f~~sL~--~a~~R 29 (106)
T cd07921 1 GTYVFDAERSRKGYALNKMCMSLN--KAENR 29 (106)
T ss_pred CCcccCHHHHHHhhhHHHHHHHHC--CHHHH
Confidence 567888888888777888888864 44433
Done!