RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17439
(576 letters)
>d1qkia2 d.81.1.5 (A:200-434,A:450-511) Glucose 6-phosphate
dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Length = 297
Score = 171 bits (434), Expect = 2e-49
Identities = 72/91 (79%), Positives = 82/91 (90%)
Query: 38 DHYLGKEMVQNLMTMRFGNRIFTPTWNRENIASVMITFKEPFGTQGRGGYFDEFGIIRDV 97
DHYLGKEMVQNLM +RF NRIF P WNR+NIA V++TFKEPFGT+GRGGYFDEFGIIRDV
Sbjct: 1 DHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEPFGTEGRGGYFDEFGIIRDV 60
Query: 98 MQNHLLQILSLVAMEKPATIHPDDIRNEKVH 128
MQNHLLQ+L LVAMEKPA+ + DD+R+EKV
Sbjct: 61 MQNHLLQMLCLVAMEKPASTNSDDVRDEKVK 91
Score = 142 bits (360), Expect = 5e-39
Identities = 102/142 (71%), Positives = 119/142 (83%)
Query: 432 KVKVLKCIPPLQLEDVVLGQYTGDPNGEGDAKYGYLDDKTVPPGSNTPTFASAVLKIKNE 491
KVKVLKCI +Q +VVLGQY G+P+GEG+A GYLDD TVP GS T TFA+ VL ++NE
Sbjct: 89 KVKVLKCISEVQANNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAAVVLYVENE 148
Query: 492 RWDGVPFILRCGKALNERKADIRIQYTDVPGDIFEGKTKRNELVMRVQPGEAVYVKMMTK 551
RWDGVPFILRCGKALNERKA++R+Q+ DV GDIF + KRNELV+RVQP EAVY KMMTK
Sbjct: 149 RWDGVPFILRCGKALNERKAEVRLQFHDVAGDIFHQQCKRNELVIRVQPNEAVYTKMMTK 208
Query: 552 TPGMSFDMEETELDLTYGSRYK 573
PGM F+ EE+ELDLTYG+RYK
Sbjct: 209 KPGMFFNPEESELDLTYGNRYK 230
Score = 70.1 bits (171), Expect = 9e-14
Identities = 50/69 (72%), Positives = 59/69 (85%)
Query: 364 ALNERKADIRIQYTDVPGDIFEGKTKRNELVMRVQPGEAVYVKMMTKTPGMSFDMEETEL 423
ALNERKA++R+Q+ DV GDIF + KRNELV+RVQP EAVY KMMTK PGM F+ EE+EL
Sbjct: 162 ALNERKAEVRLQFHDVAGDIFHQQCKRNELVIRVQPNEAVYTKMMTKKPGMFFNPEESEL 221
Query: 424 DLTYGSRYK 432
DLTYG+RYK
Sbjct: 222 DLTYGNRYK 230
>d1h9aa2 d.81.1.5 (A:182-412,A:427-485) Glucose 6-phosphate
dehydrogenase {Leuconostoc mesenteroides [TaxId: 1245]}
Length = 290
Score = 155 bits (394), Expect = 7e-44
Identities = 39/88 (44%), Positives = 54/88 (61%)
Query: 43 KEMVQNLMTMRFGNRIFTPTWNRENIASVMITFKEPFGTQGRGGYFDEFGIIRDVMQNHL 102
KEMVQN+ +RFGN IF WN++ I +V +T E G + R GY+D G + D++QNH
Sbjct: 1 KEMVQNIAALRFGNPIFDAAWNKDYIKNVQVTLSEVLGVEERAGYYDTAGALLDMIQNHT 60
Query: 103 LQILSLVAMEKPATIHPDDIRNEKVHPC 130
+QI+ +AMEKP + DIR K
Sbjct: 61 MQIVGWLAMEKPESFTDKDIRAAKNAAF 88
Score = 113 bits (284), Expect = 1e-28
Identities = 33/147 (22%), Positives = 57/147 (38%), Gaps = 8/147 (5%)
Query: 432 KVKVLKCIPPLQLED----VVLGQYTGDPNGEGDAKYGYLDDKTVPPGSNTPTFASAVLK 487
K + + V QY G+ YL++ VP S TF + L+
Sbjct: 84 KNAAFNALKIYDEAEVNKYFVRAQYGA---GDSADFKPYLEELDVPADSKNNTFIAGELQ 140
Query: 488 IKNERWDGVPFILRCGKALNERKADIRIQYTDVPGDIFEGKTK-RNELVMRVQPGEAVYV 546
RW+GVPF +R GK L ++ + I + + + L + + P A+ +
Sbjct: 141 FDLPRWEGVPFYVRSGKRLAAKQTRVDIVFKAGTFNFGSEQEACEAVLSIIIDPKGAIEL 200
Query: 547 KMMTKTPGMSFDMEETELDLTYGSRYK 573
K+ K+ +F+ +L T K
Sbjct: 201 KLNAKSVEDAFNTRTIDLGWTVSDEDK 227
Score = 51.2 bits (122), Expect = 1e-07
Identities = 11/70 (15%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Query: 364 ALNERKADIRIQYTDVPGDIFEGKTK-RNELVMRVQPGEAVYVKMMTKTPGMSFDMEETE 422
L ++ + I + + + L + + P A+ +K+ K+ +F+ +
Sbjct: 158 RLAAKQTRVDIVFKAGTFNFGSEQEACEAVLSIIIDPKGAIELKLNAKSVEDAFNTRTID 217
Query: 423 LDLTYGSRYK 432
L T K
Sbjct: 218 LGWTVSDEDK 227
>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate
dehydrogenase, N-terminal domain {Leuconostoc
mesenteroides [TaxId: 1245]}
Length = 195
Score = 93.9 bits (233), Expect = 9e-23
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 1 GWTRVIIEKPFGKDSDSSRHLSNHLGALFPEEQIYRIDHYLGKEMVQNLMTMRFGN 56
G+ R++IEKPFG D++ L N L F + Q++RIDHYLG+ + + G+
Sbjct: 140 GYNRLMIEKPFGTSYDTAAELQNDLENAFDDNQLFRIDHYLGEPYERMIHDTMNGD 195
>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate
dehydrogenase, N-terminal domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 203
Score = 85.8 bits (212), Expect = 6e-20
Identities = 26/49 (53%), Positives = 37/49 (75%), Gaps = 2/49 (4%)
Query: 1 GWTRVIIEKPFGKDSDSSRHLSNHLGALFPEEQIYRIDHYLGKEMVQNL 49
GW R+I+EKPFG+D SS LSNH+ +LF E+QIYRID Y + ++ ++
Sbjct: 152 GWNRIIVEKPFGRDLQSSDRLSNHISSLFREDQIYRIDAY--ERLILDV 198
>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 232
Score = 29.7 bits (65), Expect = 0.73
Identities = 24/180 (13%), Positives = 49/180 (27%), Gaps = 16/180 (8%)
Query: 19 RHLSNHLGALFPEEQIYRIDHYLGKEMVQNLMTMRFGNRIFTPTWNRENIASVMITFKEP 78
R L + ++ I + + F + +
Sbjct: 28 RVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCC 87
Query: 79 FGTQGRGGYFDEF-----------GIIRDVMQNHLLQILSLVAMEKPATIHPDDIRNEKV 127
GT + F + +LS +K + ++ E
Sbjct: 88 LGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEVE 147
Query: 128 HPCPEDRIHQHILWRP----DPTQEVKEFE-LKTVTFGLPPSPYQAQRSIYVDDIVSGAV 182
E + ++ ++RP QE + E L FG P + + S+ V +V +
Sbjct: 148 AKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAML 207
>d2r85a1 c.30.1.8 (A:1-99) 5-formaminoimidazole-4-carboxamide
ribonucleotide synthetase PurP {Pyrococcus furiosus
[TaxId: 2261]}
Length = 99
Score = 25.3 bits (56), Expect = 7.7
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 40 YLGKEMVQNLMTMRFGNR 57
+LG E+V+N+ FGN+
Sbjct: 75 HLGIELVENMKVPYFGNK 92
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.137 0.413
Gapped
Lambda K H
0.267 0.0746 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,242,929
Number of extensions: 109765
Number of successful extensions: 194
Number of sequences better than 10.0: 1
Number of HSP's gapped: 191
Number of HSP's successfully gapped: 12
Length of query: 576
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 486
Effective length of database: 1,171,896
Effective search space: 569541456
Effective search space used: 569541456
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (24.9 bits)