BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17455
(149 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Z8H|A Chain A, Structure Of Mouse Bach1 Btb Domain
Length = 138
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 21 VNSLLKKETLVDLRS-AEGQYLKAHKVVLCTCSPVFEIPLFEMLLSQHNDERPILIFSET 79
+N KK+ L D+ EGQ +AH+ VL CS F ++ Q + E + + E
Sbjct: 27 LNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFH----SRIVGQTDAELTVTLPEEV 82
Query: 80 KFNELKSMIDYMYKGEVNIAPDELNHFLKAAERLQIRGLSES 121
+ +I + Y ++ ++ D ++ + E L + + ES
Sbjct: 83 TVKGFEPLIQFAYTAKLILSKDNVDEVCRCVEFLSVHNIEES 124
>pdb|2IHC|A Chain A, Crystal Structure Of The Bric-A-Brac (Btb) Domain Of Human
Bach1
pdb|2IHC|B Chain B, Crystal Structure Of The Bric-A-Brac (Btb) Domain Of Human
Bach1
pdb|2IHC|C Chain C, Crystal Structure Of The Bric-A-Brac (Btb) Domain Of Human
Bach1
pdb|2IHC|D Chain D, Crystal Structure Of The Bric-A-Brac (Btb) Domain Of Human
Bach1
Length = 124
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 26 KKETLVDLR-SAEGQYLKAHKVVLCTCSPVFEIPLFEMLLSQHNDERPILIFSETKFNEL 84
KK+ L D+ EGQ +AH+ VL CS F ++ Q + E I + E
Sbjct: 25 KKDVLCDVTIFVEGQRFRAHRSVLAACSSYFH----SRIVGQADGELNITLPEEVTVKGF 80
Query: 85 KSMIDYMYKGEVNIAPDELNHFLKAAERLQIRGLSES 121
+ +I + Y ++ ++ + ++ K E L + + ES
Sbjct: 81 EPLIQFAYTAKLILSKENVDEVCKCVEFLSVHNIEES 117
>pdb|3M52|A Chain A, Crystal Structure Of The Btb Domain From The Miz-1ZBTB17
Transcription Regulator
pdb|3M52|B Chain B, Crystal Structure Of The Btb Domain From The Miz-1ZBTB17
Transcription Regulator
Length = 117
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 37 EGQYLKAHKVVLCTCSPVFEIPLFEMLLSQHNDERPILIFSETKFNELKSMIDYMYKGEV 96
+G + KAHK VL CS F++ LF D++ ++ + L ++++MY ++
Sbjct: 33 DGVHFKAHKAVLAACSEYFKM-LFV-------DQKDVVHLDISNAAGLGQVLEFMYTAKL 84
Query: 97 NIAPDELNHFLKAAERLQIR 116
+++P+ ++ L A LQ++
Sbjct: 85 SLSPENVDDVLAVATFLQMQ 104
>pdb|2Q81|A Chain A, Crystal Structure Of The Miz-1 BtbPOZ DOMAIN
pdb|2Q81|B Chain B, Crystal Structure Of The Miz-1 BtbPOZ DOMAIN
pdb|2Q81|C Chain C, Crystal Structure Of The Miz-1 BtbPOZ DOMAIN
pdb|2Q81|D Chain D, Crystal Structure Of The Miz-1 BtbPOZ DOMAIN
Length = 119
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 37 EGQYLKAHKVVLCTCSPVFEIPLFEMLLSQHNDERPILIFSETKFNELKSMIDYMYKGEV 96
+G + KAHK VL CS F++ LF D++ ++ + L ++++MY ++
Sbjct: 35 DGVHFKAHKAVLAACSEYFKM-LFV-------DQKDVVHLDISNAAGLGQVLEFMYTAKL 86
Query: 97 NIAPDELNHFLKAAERLQIR 116
+++P+ ++ L A LQ++
Sbjct: 87 SLSPENVDDVLAVATFLQMQ 106
>pdb|3OHU|A Chain A, Crystal Structure Of The Human Bach2 Poz Domain, Form I
pdb|3OHU|B Chain B, Crystal Structure Of The Human Bach2 Poz Domain, Form I
pdb|3OHU|C Chain C, Crystal Structure Of The Human Bach2 Poz Domain, Form I
pdb|3OHU|D Chain D, Crystal Structure Of The Human Bach2 Poz Domain, Form I
pdb|3OHU|E Chain E, Crystal Structure Of The Human Bach2 Poz Domain, Form I
pdb|3OHU|F Chain F, Crystal Structure Of The Human Bach2 Poz Domain, Form I
pdb|3OHV|A Chain A, Crystal Structure Of The Human Bach2 Poz Domain, Form Ii
pdb|3OHV|B Chain B, Crystal Structure Of The Human Bach2 Poz Domain, Form Ii
pdb|3OHV|C Chain C, Crystal Structure Of The Human Bach2 Poz Domain, Form Ii
pdb|3OHV|D Chain D, Crystal Structure Of The Human Bach2 Poz Domain, Form Ii
pdb|3OHV|E Chain E, Crystal Structure Of The Human Bach2 Poz Domain, Form Ii
pdb|3OHV|F Chain F, Crystal Structure Of The Human Bach2 Poz Domain, Form Ii
Length = 125
Score = 32.7 bits (73), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 26 KKETLVDLR-SAEGQYLKAHKVVLCTCSPVFEIPLFEMLLSQHNDERPILIFSETKFNEL 84
KK+ L D+ E + +AH+ VL CS F ++ L+ Q ++ + + E
Sbjct: 28 KKDILCDVTLIVERKEFRAHRAVLAACSEYF----WQALVGQTKNDLVVSLPEEVTARGF 83
Query: 85 KSMIDYMYKGEVNIAPDELNHFLKAAERLQIRGLSES 121
++ + Y ++ ++ + + ++ AE L++ L +S
Sbjct: 84 GPLLQFAYTAKLLLSRENIREVIRCAEFLRMHNLEDS 120
>pdb|4AP2|A Chain A, Crystal Structure Of The Human Klhl11-cul3 Complex At 2.8a
Resolution
pdb|4APF|A Chain A, Crystal Structure Of The Human Klhl11-cul3 Complex At 3.1a
Resolution
Length = 297
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 35 SAEGQYLKAHKVVLCTCSPVFEIPLFEMLLSQHNDER-PILIFSETKFNE---LKSMIDY 90
A G+ +AH+ VL + F PL S+ R + +S E ++++I+Y
Sbjct: 59 GAGGREFRAHRSVLAAATEYF-TPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEY 117
Query: 91 MYKGEVNIAPDELNHFLKAAERLQIRGLSE 120
MY G + ++ ++ L+ A+R + L E
Sbjct: 118 MYTGRIRVSTGSVHEVLELADRFLLIRLKE 147
>pdb|2IF5|A Chain A, Structure Of The Poz Domain Of Human Lrf, A Master
Regulator Of Oncogenesis
Length = 120
Score = 30.0 bits (66), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 37 EGQYLKAHKVVLCTCSPVFEIPLFE--MLLSQHNDERPILIFSETKFNELKSMIDYMYKG 94
EG+ H+ VL CS F+ LF ++ Q N + +E L +++D+ Y
Sbjct: 33 EGREFPTHRSVLAACSQYFK-KLFTSGAVVDQQNVYEIDFVSAEA----LTALMDFAYTA 87
Query: 95 EVNIAPDELNHFLKAAERLQIRGLS 119
+ ++ + L AA L+I +S
Sbjct: 88 TLTVSTANVGDILSAARLLEIPAVS 112
>pdb|2NN2|A Chain A, Crystal Structure Of The Btb Domain From The LrfZBTB7
Transcriptional Regulator
pdb|2NN2|B Chain B, Crystal Structure Of The Btb Domain From The LrfZBTB7
Transcriptional Regulator
Length = 133
Score = 29.6 bits (65), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 37 EGQYLKAHKVVLCTCSPVFEIPLFE--MLLSQHNDERPILIFSETKFNELKSMIDYMYKG 94
EG+ H+ VL CS F+ LF ++ Q N + +E L +++D+ Y
Sbjct: 43 EGREFPTHRSVLAACSQYFK-KLFTSGAVVDQQNVYEIDFVSAEA----LTALMDFAYTA 97
Query: 95 EVNIAPDELNHFLKAAERLQIRGLS 119
+ ++ + L AA L+I +S
Sbjct: 98 TLTVSTANVGDILSAARLLEIPAVS 122
>pdb|3HQI|A Chain A, Structures Of Spop-Substrate Complexes: Insights Into
Molecular Architectures Of Btb-Cul3 Ubiquitin Ligases:
SpopmathxBTB3-Box-Pucsbc1
pdb|3HQI|B Chain B, Structures Of Spop-Substrate Complexes: Insights Into
Molecular Architectures Of Btb-Cul3 Ubiquitin Ligases:
SpopmathxBTB3-Box-Pucsbc1
pdb|3HU6|A Chain A, Structures Of Spop-Substrate Complexes: Insights Into
Molecular Architectures Of Btb-Cul3 Ubiquitin Ligases:
SpopmathxBTB3-Box-Pucsbc1
pdb|3HU6|B Chain B, Structures Of Spop-Substrate Complexes: Insights Into
Molecular Architectures Of Btb-Cul3 Ubiquitin Ligases:
SpopmathxBTB3-Box-Pucsbc1
Length = 312
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 38 GQYLKAHKVVLCTCSPVFEIPLFEMLLSQHNDERPILIFSETKFNELKSMIDYMYKGEVN 97
GQ +AHK +L SPVF +FE + + R + ++ + K M+ ++Y G+
Sbjct: 183 GQEFQAHKAILAARSPVFS-AMFEHEMEESKKNR--VEINDVEPEVFKEMMCFIYTGKAP 239
Query: 98 IAPDELNHFLKAAERLQIRGL 118
+ L AA++ + L
Sbjct: 240 NLDKMADDLLAAADKYALERL 260
>pdb|4EOZ|A Chain A, Crystal Structure Of The Spop Btb Domain Complexed With
The Cul3 N- Terminal Domain
pdb|4EOZ|C Chain C, Crystal Structure Of The Spop Btb Domain Complexed With
The Cul3 N- Terminal Domain
Length = 145
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 38 GQYLKAHKVVLCTCSPVFEIPLFEMLLSQHNDERPILIFSETKFNELKSMIDYMYKGEVN 97
GQ +AHK +L SPVF +FE + + R + ++ + K M+ ++Y G+
Sbjct: 34 GQEFQAHKAILAARSPVFS-AMFEHEMEESKKNR--VEINDVEPEVFKEMMCFIYTGKAP 90
Query: 98 IAPDELNHFLKAAERLQIRGL 118
+ L AA++ + L
Sbjct: 91 NLDKMADDLLAAADKYALERL 111
>pdb|3I3N|A Chain A, Crystal Structure Of The Btb-Back Domains Of Human Klhl11
pdb|3I3N|B Chain B, Crystal Structure Of The Btb-Back Domains Of Human Klhl11
Length = 279
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 35 SAEGQYLKAHKVVLCTCSPVFEIPLFEMLLSQHNDERPILIFSETKFNE-------LKSM 87
A G+ +AH+ VL + F PL L Q ++ R + +E ++++
Sbjct: 41 GAGGREFRAHRSVLAAATEYF-TPL---LSGQFSESRSGRVEXRKWSSEPGPEPDTVEAV 96
Query: 88 IDYMYKGEVNIAPDELNHFLKAAERLQIRGLSE 120
I+Y Y G + ++ ++ L+ A+R + L E
Sbjct: 97 IEYXYTGRIRVSTGSVHEVLELADRFLLIRLKE 129
>pdb|3FTQ|A Chain A, Crystal Structure Of Septin 2 In Complex With Gppnhp And
Mg2+
pdb|3FTQ|B Chain B, Crystal Structure Of Septin 2 In Complex With Gppnhp And
Mg2+
pdb|3FTQ|C Chain C, Crystal Structure Of Septin 2 In Complex With Gppnhp And
Mg2+
pdb|3FTQ|D Chain D, Crystal Structure Of Septin 2 In Complex With Gppnhp And
Mg2+
Length = 274
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 10/55 (18%)
Query: 95 EVNIAP-----DELNHFLKAAERLQIRGLSESESTTQTAVHYPD---DDEEDYSQ 141
+VNI P D L LK ERL+ R L E E + H PD D++ED+ +
Sbjct: 142 KVNIVPVIAKADTLT--LKERERLKKRILDEIEEHSIKIYHLPDAESDEDEDFKE 194
>pdb|1BUO|A Chain A, Btb Domain From Plzf
Length = 121
Score = 26.9 bits (58), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 16/100 (16%)
Query: 11 RANQETMISLVNSLLKKETLVDLRSAEGQYLKAHKVVLCTCSPVFEIPLFEMLLSQHNDE 70
+ANQ + L +L +VD Q AH+ VL S +FEI L N +
Sbjct: 18 KANQ---MRLAGTLCDVVIMVD-----SQEFHAHRTVLACTSKMFEI------LFHRNSQ 63
Query: 71 RPILIFSETKFNELKSMIDYMYKGEVNIAPDELNHFLKAA 110
L F K + +++Y Y + ++L+ L AA
Sbjct: 64 HYTLDFLSPK--TFQQILEYAYTATLQAKAEDLDDLLYAA 101
>pdb|1CS3|A Chain A, Structure Of BtbPOZ TRANSCRIPTION REPRESSION DOMAIN FROM
PROMELOCYTIC Leukemia Zinc Finger Oncoprotein
Length = 116
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 16/100 (16%)
Query: 11 RANQETMISLVNSLLKKETLVDLRSAEGQYLKAHKVVLCTCSPVFEIPLFEMLLSQHNDE 70
+ANQ + L +L +VD Q AH+ VL S +FEI L N +
Sbjct: 17 KANQ---MRLAGTLCDVVIMVD-----SQEFHAHRTVLACTSKMFEI------LFHRNSQ 62
Query: 71 RPILIFSETKFNELKSMIDYMYKGEVNIAPDELNHFLKAA 110
L F K + +++Y Y + ++L+ L AA
Sbjct: 63 HYTLDFLSPK--TFQQILEYAYTATLQAKAEDLDDLLYAA 100
>pdb|2QAG|A Chain A, Crystal Structure Of Human Septin Trimer 267
Length = 361
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 10/55 (18%)
Query: 95 EVNIAP-----DELNHFLKAAERLQIRGLSESESTTQTAVHYPD---DDEEDYSQ 141
+VNI P D L LK ERL+ R L E E H PD D++ED+ +
Sbjct: 174 KVNIVPVIAKADTLT--LKERERLKKRILDEIEEHNIKIYHLPDAESDEDEDFKE 226
>pdb|2QA5|A Chain A, Crystal Structure Of Sept2 G-Domain
pdb|2QA5|B Chain B, Crystal Structure Of Sept2 G-Domain
Length = 315
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 10/55 (18%)
Query: 95 EVNIAP-----DELNHFLKAAERLQIRGLSESESTTQTAVHYPD---DDEEDYSQ 141
+VNI P D L LK ERL+ R L E E H PD D++ED+ +
Sbjct: 174 KVNIVPVIAKADTLT--LKERERLKKRILDEIEEHNIKIYHLPDAESDEDEDFKE 226
>pdb|1R28|A Chain A, Crystal Structure Of The B-Cell Lymphoma 6 (Bcl6) Btb
Domain To 2.2 Angstrom
pdb|1R28|B Chain B, Crystal Structure Of The B-Cell Lymphoma 6 (Bcl6) Btb
Domain To 2.2 Angstrom
pdb|1R29|A Chain A, Crystal Structure Of The B-cell Lymphoma 6 (bcl6) Btb
Domain To 1.3 Angstrom
pdb|1R2B|A Chain A, Crystal Structure Of The Bcl6 Btb Domain Complexed With A
Smrt Co-Repressor Peptide
pdb|1R2B|B Chain B, Crystal Structure Of The Bcl6 Btb Domain Complexed With A
Smrt Co-Repressor Peptide
pdb|3BIM|A Chain A, Crystal Structure Of The Bcl6 Btb Domain Dimer In Complex
With The Bcor Bbd Corepressor Peptide
pdb|3BIM|B Chain B, Crystal Structure Of The Bcl6 Btb Domain Dimer In Complex
With The Bcor Bbd Corepressor Peptide
pdb|3BIM|C Chain C, Crystal Structure Of The Bcl6 Btb Domain Dimer In Complex
With The Bcor Bbd Corepressor Peptide
pdb|3BIM|D Chain D, Crystal Structure Of The Bcl6 Btb Domain Dimer In Complex
With The Bcor Bbd Corepressor Peptide
pdb|3BIM|E Chain E, Crystal Structure Of The Bcl6 Btb Domain Dimer In Complex
With The Bcor Bbd Corepressor Peptide
pdb|3BIM|F Chain F, Crystal Structure Of The Bcl6 Btb Domain Dimer In Complex
With The Bcor Bbd Corepressor Peptide
pdb|3BIM|G Chain G, Crystal Structure Of The Bcl6 Btb Domain Dimer In Complex
With The Bcor Bbd Corepressor Peptide
pdb|3BIM|H Chain H, Crystal Structure Of The Bcl6 Btb Domain Dimer In Complex
With The Bcor Bbd Corepressor Peptide
pdb|3LBZ|A Chain A, Crystal Structure Of The Bcl6 Btb Domain Complexed With
The Molecule Inhibitor 79-6
pdb|3LBZ|B Chain B, Crystal Structure Of The Bcl6 Btb Domain Complexed With
The Molecule Inhibitor 79-6
Length = 127
Score = 26.2 bits (56), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 21 VNSLLKKETLVDLR-SAEGQYLKAHKVVLCTCSPVFEIPLFEML---LSQHNDERPILIF 76
+N L ++ L D+ + +AHK VL CS +F + L LS N + I
Sbjct: 20 LNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEI--- 76
Query: 77 SETKFNELKSMIDYMYKGEVNIAPDELNHFLKAAERLQI 115
+ FN L +D+MY +N+ + + A LQ+
Sbjct: 77 NPEGFNIL---LDFMYTSRLNLREGNIMAVMATAMYLQM 112
>pdb|2QNR|A Chain A, Human Septin 2 In Complex With Gdp
pdb|2QNR|B Chain B, Human Septin 2 In Complex With Gdp
Length = 301
Score = 26.2 bits (56), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 10/55 (18%)
Query: 95 EVNIAP-----DELNHFLKAAERLQIRGLSESESTTQTAVHYPD---DDEEDYSQ 141
+VNI P D L LK ERL+ R L E E H PD D++ED+ +
Sbjct: 155 KVNIVPVIAKADTLT--LKERERLKKRILDEIEEHNIKIYHLPDAESDEDEDFKE 207
>pdb|3E4U|A Chain A, Crystal Structure Of The Wild-Type Human Bcl6 BtbPOZ
DOMAIN
pdb|3E4U|B Chain B, Crystal Structure Of The Wild-Type Human Bcl6 BtbPOZ
DOMAIN
pdb|3E4U|C Chain C, Crystal Structure Of The Wild-Type Human Bcl6 BtbPOZ
DOMAIN
pdb|3E4U|D Chain D, Crystal Structure Of The Wild-Type Human Bcl6 BtbPOZ
DOMAIN
pdb|3E4U|E Chain E, Crystal Structure Of The Wild-Type Human Bcl6 BtbPOZ
DOMAIN
pdb|3E4U|F Chain F, Crystal Structure Of The Wild-Type Human Bcl6 BtbPOZ
DOMAIN
Length = 130
Score = 25.8 bits (55), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 51/117 (43%), Gaps = 10/117 (8%)
Query: 4 GSQEFCL---RANQETMISLVNSLLKKETLVDLR-SAEGQYLKAHKVVLCTCSPVFEIPL 59
GS + C+ R + +++L N L ++ L D+ + +AHK VL CS +F
Sbjct: 4 GSADSCIQFTRHASDVLLNL-NRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLF---- 58
Query: 60 FEMLLSQHNDERPIL-IFSETKFNELKSMIDYMYKGEVNIAPDELNHFLKAAERLQI 115
+ + Q ++ + E ++D+MY +N+ + + A LQ+
Sbjct: 59 YSIFTDQLKCNLSVINLDPEINPEGFCILLDFMYTSRLNLREGNIMAVMATAMYLQM 115
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.130 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,935,556
Number of Sequences: 62578
Number of extensions: 136771
Number of successful extensions: 329
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 320
Number of HSP's gapped (non-prelim): 26
length of query: 149
length of database: 14,973,337
effective HSP length: 90
effective length of query: 59
effective length of database: 9,341,317
effective search space: 551137703
effective search space used: 551137703
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 47 (22.7 bits)