BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17460
(216 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9NRN9|METL5_HUMAN Methyltransferase-like protein 5 OS=Homo sapiens GN=METTL5 PE=1
SV=1
Length = 209
Score = 198 bits (504), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 144/209 (68%), Gaps = 8/209 (3%)
Query: 1 MKLKHIEQYLQQLTFNFSNPKVHLEQYHTPPHLAATILHTIQNNYNDIDGKTVLDLGCGS 60
++LK +E LQQ+ F PK+ LEQY T PH+AA +L+TI N Y+DI+ K V DLGCG
Sbjct: 4 VRLKELESRLQQVD-GFEKPKLLLEQYPTRPHIAACMLYTIHNTYDDIENKVVADLGCGC 62
Query: 61 GILTFGSILLGADFCFALECDKEILDIFIDNKNEFEITNCDAILFEINEKSLDSSVFKQK 120
G+L+ G+ +LGA C + D++ L+IF N EFE+TN D + ++ L S+ +
Sbjct: 63 GVLSIGTAMLGAGLCVGFDIDEDALEIFNRNAEEFELTNIDMVQCDV---CLLSNRMSKS 119
Query: 121 VDTVIMNPPFGTR-NCGIDLAFVQYAADISK-VVYSLHKTSTRESILKKIQAFKNVEQVD 178
DTVIMNPPFGT+ N G D+AF++ A ++++ VYSLHK+STRE + KK +K ++D
Sbjct: 120 FDTVIMNPPFGTKNNKGTDMAFLKTALEMARTAVYSLHKSSTREHVQKKAAEWKI--KID 177
Query: 179 VIAEMKYDLNQSYKFHKKSLHDIEVDLLR 207
+IAE++YDL SYKFHKK DIEVDL+R
Sbjct: 178 IIAELRYDLPASYKFHKKKSVDIEVDLIR 206
>sp|Q8K1A0|METL5_MOUSE Methyltransferase-like protein 5 OS=Mus musculus GN=Mettl5 PE=2
SV=2
Length = 209
Score = 189 bits (481), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 142/209 (67%), Gaps = 8/209 (3%)
Query: 1 MKLKHIEQYLQQLTFNFSNPKVHLEQYHTPPHLAATILHTIQNNYNDIDGKTVLDLGCGS 60
+KLK +E LQ++ F PK+ LEQY T PH+AA +L+TI N Y+DI+ K V DLGCG
Sbjct: 4 LKLKELESRLQEVD-GFEKPKLLLEQYPTRPHIAACMLYTIHNTYDDIENKAVADLGCGC 62
Query: 61 GILTFGSILLGADFCFALECDKEILDIFIDNKNEFEITNCDAILFEINEKSLDSSVFKQK 120
G+L+ G+ +LGA C + D++ L+IF N EFE+TN D I ++ SL S+ +
Sbjct: 63 GVLSIGAAMLGAGLCVGFDIDEDALEIFNKNVEEFELTNVDMIQCDVY--SL-SNRMSKL 119
Query: 121 VDTVIMNPPFGTR-NCGIDLAFVQYAADISK-VVYSLHKTSTRESILKKIQAFKNVEQVD 178
DTVIMNPPFGT+ N G D+AF++ A +++ VYSLHK+STRE I KK +K +++
Sbjct: 120 FDTVIMNPPFGTKNNKGTDMAFLKTALGMARTAVYSLHKSSTREHIQKKAAEWK--VKIE 177
Query: 179 VIAEMKYDLNQSYKFHKKSLHDIEVDLLR 207
+IAE++YDL Y FHKK DIEVDL+R
Sbjct: 178 IIAELRYDLPALYNFHKKKSVDIEVDLIR 206
>sp|Q57732|Y284_METJA Uncharacterized protein MJ0284 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0284 PE=4 SV=1
Length = 219
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 112/216 (51%), Gaps = 18/216 (8%)
Query: 1 MKLKHIEQYLQQLTFNFSNPKVHLEQYHTPPHLAATILHTIQNN-YNDIDGKTVLDLGCG 59
+K KH+E L L NPK LEQY LAA IL N+ YN++ V+DLGCG
Sbjct: 2 IKKKHLEMMLDSLK-RHPNPKADLEQYTIDGKLAADILFFAVNDFYNNV----VIDLGCG 56
Query: 60 SGILTFGSILLGADFCFALECDKEILDIFIDNKNEFEITNCDAILFEINEKSLD----SS 115
+G L GS +LGA ++ D+E ++ +N + N D + ++ + +D ++
Sbjct: 57 TGRLAIGSKILGAKRAIGIDIDRESIEAAKENAKKL---NVDVDFYCMDIRDVDDEFLNN 113
Query: 116 VFKQKVD---TVIMNPPFGTRNCGIDLAFVQYAADISKVVYSLHKTSTRESILKKIQAFK 172
V + D VI NPPFG + D F+ A +I ++Y++H T++ ++K ++
Sbjct: 114 VLGEDRDLKRVVIQNPPFGAQKKHADRVFLDKALEIGDIIYTIHNYPTKDFVIKYVE--D 171
Query: 173 NVEQVDVIAEMKYDLNQSYKFHKKSLHDIEVDLLRI 208
++ I E + + Y+FHKK + +I V + RI
Sbjct: 172 KGGKITHIYEAFFRIPAIYEFHKKKVVEIPVVIFRI 207
>sp|Q3IIC0|PRMA_PSEHT Ribosomal protein L11 methyltransferase OS=Pseudoalteromonas
haloplanktis (strain TAC 125) GN=prmA PE=3 SV=1
Length = 293
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNE 94
D+ GKTV+D GCGSGIL +I LGA+ ++ D + L+ +DN N
Sbjct: 156 DLTGKTVVDFGCGSGILGIAAIKLGAERMIGIDIDPQALEASLDNANR 203
>sp|Q9JW08|PRMA_NEIMA Ribosomal protein L11 methyltransferase OS=Neisseria meningitidis
serogroup A / serotype 4A (strain Z2491) GN=prmA PE=3
SV=1
Length = 295
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 49 DGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNEFEITNCDAILFEIN 108
+G++VLD GCGSGILT ++ LGA F ++ D++ + DN E N DA F +
Sbjct: 163 NGESVLDYGCGSGILTIAALKLGAGFAVGVDIDEQAVRAGKDNA---EQNNVDAQFFLPD 219
Query: 109 EKSLDSSVFKQKVDTVIMNP 128
L F V ++ NP
Sbjct: 220 --GLPQGQFDVVVANILANP 237
>sp|A7MXI3|PRMA_VIBHB Ribosomal protein L11 methyltransferase OS=Vibrio harveyi (strain
ATCC BAA-1116 / BB120) GN=prmA PE=3 SV=1
Length = 295
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNEFEITN 99
D+ GKTV+D GCGSGIL +I LGA+ ++ D + L DN + N
Sbjct: 157 DLSGKTVIDFGCGSGILAIAAIKLGAEKVIGIDIDPQALQASRDNAERNGVAN 209
>sp|Q9JXW2|PRMA_NEIMB Ribosomal protein L11 methyltransferase OS=Neisseria meningitidis
serogroup B (strain MC58) GN=prmA PE=3 SV=1
Length = 295
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 49 DGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNEFEITNCDAILFEIN 108
+G++VLD GCGSGILT ++ LGA F ++ D++ + DN + N DA F +
Sbjct: 163 NGESVLDYGCGSGILTIAALKLGAGFAVGVDIDEQAVRAGKDNAAQ---NNVDAQFFLPD 219
Query: 109 EKSLDSSVFKQKVDTVIMNP 128
L F V ++ NP
Sbjct: 220 --GLPQGQFDVVVANILANP 237
>sp|Q9SNQ2|ANM10_ORYSJ Protein arginine N-methyltransferase PRMT10 OS=Oryza sativa subsp.
japonica GN=PRMT10 PE=2 SV=1
Length = 380
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 15/105 (14%)
Query: 21 KVHLEQYHTPPHLAATILHTIQNNYNDIDGKTVLDLGCGSGILTFGSILLGADFCFALEC 80
+V ++ YH+ + N + GK VLD+G GSGIL S GA +A+E
Sbjct: 49 RVRMDAYHS----------AVFRNAHHFRGKVVLDVGTGSGILAIWSAQAGARKVYAVEA 98
Query: 81 DKEILDIFIDNKNEFEITNCDAILFEINEKSLDSSVFKQKVDTVI 125
++ E N A + E+ + S++ V +KVD +I
Sbjct: 99 TN-----MAEHARELARANDVADIVEVIQGSMEDVVLPEKVDVII 138
>sp|A2Y953|ANM10_ORYSI Protein arginine N-methyltransferase PRMT10 OS=Oryza sativa subsp.
indica GN=PRMT10 PE=2 SV=1
Length = 382
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 15/105 (14%)
Query: 21 KVHLEQYHTPPHLAATILHTIQNNYNDIDGKTVLDLGCGSGILTFGSILLGADFCFALEC 80
+V ++ YH+ + N + GK VLD+G GSGIL S GA +A+E
Sbjct: 51 RVRMDAYHS----------AVFRNAHHFRGKVVLDVGTGSGILAIWSAQAGARKVYAVEA 100
Query: 81 DKEILDIFIDNKNEFEITNCDAILFEINEKSLDSSVFKQKVDTVI 125
++ E N A + E+ + S++ V +KVD +I
Sbjct: 101 TN-----MAEHARELARANDVADIVEVIQGSMEDVVLPEKVDVII 140
>sp|A6LJG3|PRMA_THEM4 Ribosomal protein L11 methyltransferase OS=Thermosipho
melanesiensis (strain BI429 / DSM 12029) GN=prmA PE=3
SV=1
Length = 258
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 28 HTPPHLAATILHTIQNNYNDIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDI 87
HT LAAT+L G VLDLGCGSGIL+ + LGA A++ DK ++
Sbjct: 114 HTTTKLAATLLKKYLRQ-----GMDVLDLGCGSGILSILAKKLGASGVLAVDNDKMAVES 168
Query: 88 FIDN--KNEFEI 97
I+N KN E+
Sbjct: 169 AIENVEKNNVEV 180
>sp|Q5FAH7|PRMA_NEIG1 Ribosomal protein L11 methyltransferase OS=Neisseria gonorrhoeae
(strain ATCC 700825 / FA 1090) GN=prmA PE=3 SV=1
Length = 295
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 49 DGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNEFEITNCDAILFEIN 108
+G++VLD GCGSGILT ++ LGA ++ D++ + DN E N DA F +
Sbjct: 163 NGESVLDYGCGSGILTIAALKLGAGSAVGVDIDEQAVRSGRDNA---EQNNVDAQFFLPD 219
Query: 109 EKSLDSSVFKQKVDTVIMNP 128
SL F V ++ NP
Sbjct: 220 --SLPQGQFDVVVANILANP 237
>sp|B1XKZ0|PRMA_SYNP2 Ribosomal protein L11 methyltransferase OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6) GN=prmA PE=3 SV=1
Length = 296
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 51 KTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNEFEITNCDAILFEINEK 110
+ + D+GCGSGIL+ GS+LLGA F + D +IL + N N + N + + +
Sbjct: 157 QVIADIGCGSGILSIGSLLLGAKQTFGV--DTDILAVTASNSNR-ALNNIEPERMVVAQG 213
Query: 111 SLDS--SVFKQKVDTVIMN 127
S+D+ ++ + D ++ N
Sbjct: 214 SIDTLPKMYPEPFDGIVCN 232
>sp|A5IHD3|PRMA_LEGPC Ribosomal protein L11 methyltransferase OS=Legionella pneumophila
(strain Corby) GN=prmA PE=3 SV=1
Length = 289
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNEFEIT 98
D+ K+V+D GCGSGIL+ +I LGA +A++ D + L +N + IT
Sbjct: 153 DLKNKSVIDYGCGSGILSLAAIKLGAKHVYAVDIDNQALQATQNNAHANHIT 204
>sp|Q87KU2|PRMA_VIBPA Ribosomal protein L11 methyltransferase OS=Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633) GN=prmA PE=3 SV=1
Length = 295
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDN 91
D+ GKTV+D GCGSGIL +I LGA+ ++ D + L DN
Sbjct: 157 DLSGKTVIDFGCGSGILAIAAIKLGAEKVIGIDIDPQALLASKDN 201
>sp|A1KS36|PRMA_NEIMF Ribosomal protein L11 methyltransferase OS=Neisseria meningitidis
serogroup C / serotype 2a (strain ATCC 700532 / FAM18)
GN=prmA PE=3 SV=1
Length = 295
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 49 DGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNEFEITNCDAILFEIN 108
+G++VLD GCGSGILT ++ LGA ++ D++ + DN E N DA F +
Sbjct: 163 NGESVLDYGCGSGILTIAALKLGAGSAVGVDIDEQAVRAGKDNA---EQNNVDAQFFLPD 219
Query: 109 EKSLDSSVFKQKVDTVIMNP 128
L F V ++ NP
Sbjct: 220 --GLPQGQFDVVVANILANP 237
>sp|Q8DD03|PRMA_VIBVU Ribosomal protein L11 methyltransferase OS=Vibrio vulnificus
(strain CMCP6) GN=prmA PE=3 SV=1
Length = 295
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDN 91
D+ GKTV+D GCGSGIL +I LGA+ ++ D + L DN
Sbjct: 157 DLSGKTVIDFGCGSGILAIAAIKLGAEKVIGIDIDPQALLASKDN 201
>sp|P60094|PRMA_VIBVY Ribosomal protein L11 methyltransferase OS=Vibrio vulnificus
(strain YJ016) GN=prmA PE=3 SV=1
Length = 295
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDN 91
D+ GKTV+D GCGSGIL +I LGA+ ++ D + L DN
Sbjct: 157 DLSGKTVIDFGCGSGILAIAAIKLGAEKVIGIDIDPQALLASKDN 201
>sp|Q5X7S8|PRMA_LEGPA Ribosomal protein L11 methyltransferase OS=Legionella pneumophila
(strain Paris) GN=prmA PE=3 SV=1
Length = 289
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNEFEIT 98
D+ K+++D GCGSGIL+ +I LGA +A++ D + L N + IT
Sbjct: 153 DLKNKSIIDYGCGSGILSLAAIKLGAKHVYAVDIDNQALQATQSNAHANHIT 204
>sp|Q6DAJ5|PRMA_ERWCT Ribosomal protein L11 methyltransferase OS=Erwinia carotovora
subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672)
GN=prmA PE=3 SV=1
Length = 295
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDN 91
D++GKT++D GCGSGIL ++ LGA ++ D + + DN
Sbjct: 156 DLEGKTIIDFGCGSGILAIAALKLGAARAIGIDIDPQAIQASRDN 200
>sp|C4LAF1|PRMA_TOLAT Ribosomal protein L11 methyltransferase OS=Tolumonas auensis
(strain DSM 9187 / TA4) GN=prmA PE=3 SV=1
Length = 292
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNEFEITN 99
D+ GKT++D GCGSGIL ++ LGA+ ++ D + ++ DN +++
Sbjct: 154 DLKGKTLVDFGCGSGILAIAALKLGAERVIGIDIDPQAIEASRDNAQRNGVSD 206
>sp|Q5WZ79|PRMA_LEGPL Ribosomal protein L11 methyltransferase OS=Legionella pneumophila
(strain Lens) GN=prmA PE=3 SV=1
Length = 289
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNEFEIT 98
D+ K+++D GCGSGIL+ +I LGA +A++ D + L N + IT
Sbjct: 153 DLKNKSIIDYGCGSGILSLAAIKLGAKHVYAVDIDNQALQATQSNAHANHIT 204
>sp|B7KJ88|PRMA_CYAP7 Ribosomal protein L11 methyltransferase OS=Cyanothece sp. (strain
PCC 7424) GN=prmA PE=3 SV=1
Length = 298
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNEFEITNCDAILFE 106
D + T+ D+GCGSGIL+ G+ILLGA +A++ D + N++ EI D
Sbjct: 153 DAEPVTLADIGCGSGILSIGAILLGAQKVYAVDTDPLAVSATRSNRHLNEI---DPNHLI 209
Query: 107 INEKSLDS--SVFKQKVDTVIMN 127
+N+ S++ + +VD ++ N
Sbjct: 210 VNQGSIEQLLDLIPGQVDGIVCN 232
>sp|C6DIJ9|PRMA_PECCP Ribosomal protein L11 methyltransferase OS=Pectobacterium
carotovorum subsp. carotovorum (strain PC1) GN=prmA PE=3
SV=1
Length = 295
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDN 91
D++GKT++D GCGSGIL ++ LGA ++ D + + DN
Sbjct: 156 DLEGKTIIDFGCGSGILAIAALKLGAARAIGIDIDPQAIQASRDN 200
>sp|Q5ZYB1|PRMA_LEGPH Ribosomal protein L11 methyltransferase OS=Legionella pneumophila
subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 /
DSM 7513) GN=prmA PE=3 SV=1
Length = 289
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNEFEIT 98
D+ K+++D GCGSGIL+ +I LGA +A++ D + L N + IT
Sbjct: 153 DLKNKSIIDYGCGSGILSLAAIKLGAKHVYAVDIDNQALQATQSNAHANHIT 204
>sp|B6ENA3|PRMA_ALISL Ribosomal protein L11 methyltransferase OS=Aliivibrio salmonicida
(strain LFI1238) GN=prmA PE=3 SV=1
Length = 294
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDN 91
D+ GKTV+D GCGSGIL +I LGA ++ D + + DN
Sbjct: 157 DLTGKTVIDFGCGSGILAIAAIKLGAAKVVGIDIDPQAITASKDN 201
>sp|P60092|PRMA_PHOLL Ribosomal protein L11 methyltransferase OS=Photorhabdus luminescens
subsp. laumondii (strain TT01) GN=prmA PE=3 SV=1
Length = 296
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDN 91
+++GKTV+D GCGSGIL ++ LGA ++ D + + DN
Sbjct: 156 NLEGKTVIDFGCGSGILAIAALKLGATHAIGIDIDPQAIQASRDN 200
>sp|Q9KV64|PRMA_VIBCH Ribosomal protein L11 methyltransferase OS=Vibrio cholerae serotype
O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=prmA
PE=3 SV=1
Length = 295
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDN 91
D+ GKTV+D GCGSGIL +I LGA ++ D + L DN
Sbjct: 157 DLSGKTVIDFGCGSGILAIAAIKLGAAKVIGIDIDPQALLASKDN 201
>sp|Q9MAT5|ANM10_ARATH Protein arginine N-methyltransferase PRMT10 OS=Arabidopsis thaliana
GN=PRMT10 PE=1 SV=1
Length = 383
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 44 NYNDIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNEF-EITNCDA 102
N + +GKTVLD+G GSGIL S GA +A+E K D+ + N D
Sbjct: 65 NKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEATK-----MADHARALVKANNLDH 119
Query: 103 ILFEINEKSLDSSVFKQKVDTVI 125
I+ E+ E S++ +KVD +I
Sbjct: 120 IV-EVIEGSVEDISLPEKVDVII 141
>sp|C5BEW8|PRMA_EDWI9 Ribosomal protein L11 methyltransferase OS=Edwardsiella ictaluri
(strain 93-146) GN=prmA PE=3 SV=1
Length = 293
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNEFEITN 99
D+ GKTV+D GCGSGIL ++ LGA ++ D + + DN ++
Sbjct: 156 DLAGKTVIDFGCGSGILAIAALKLGAARAIGIDIDPQAIQASRDNAERNGVSG 208
>sp|A5F3S3|PRMA_VIBC3 Ribosomal protein L11 methyltransferase OS=Vibrio cholerae serotype
O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=prmA PE=3
SV=1
Length = 295
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDN 91
D+ GKTV+D GCGSGIL +I LGA ++ D + L DN
Sbjct: 157 DLTGKTVIDFGCGSGILAIAAIKLGAAKVIGIDIDPQALLASKDN 201
>sp|C3LQP9|PRMA_VIBCM Ribosomal protein L11 methyltransferase OS=Vibrio cholerae serotype
O1 (strain M66-2) GN=prmA PE=3 SV=1
Length = 295
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDN 91
D+ GKTV+D GCGSGIL +I LGA ++ D + L DN
Sbjct: 157 DLTGKTVIDFGCGSGILAIAAIKLGAAKVIGIDIDPQALLASKDN 201
>sp|B5FC65|PRMA_VIBFM Ribosomal protein L11 methyltransferase OS=Vibrio fischeri (strain
MJ11) GN=prmA PE=3 SV=1
Length = 294
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDN 91
D++GKTV+D GCGSGIL +I LGA ++ D + + DN
Sbjct: 157 DLEGKTVVDFGCGSGILAIAAIKLGAAKVIGIDIDPQAILASKDN 201
>sp|Q5E263|PRMA_VIBF1 Ribosomal protein L11 methyltransferase OS=Vibrio fischeri (strain
ATCC 700601 / ES114) GN=prmA PE=3 SV=1
Length = 294
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDN 91
D++GKTV+D GCGSGIL +I LGA ++ D + + DN
Sbjct: 157 DLEGKTVVDFGCGSGILAIAAIKLGAAKVIGIDIDPQAILASKDN 201
>sp|Q5XK84|CARM1_XENLA Histone-arginine methyltransferase CARM1 OS=Xenopus laevis GN=carm1
PE=2 SV=1
Length = 602
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 35 ATILHTIQNNYNDIDGKTVLDLGCGSGILTFGSILLGADFCFALECDK 82
T I N+ D K VLD+GCGSGIL+F ++ GA +A+E
Sbjct: 141 GTYQRAILQNHTDFKDKVVLDVGCGSGILSFFAVQAGARKVYAVEASS 188
>sp|C1DCV9|PRMA_LARHH Ribosomal protein L11 methyltransferase OS=Laribacter hongkongensis
(strain HLHK9) GN=prmA PE=3 SV=1
Length = 297
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 50 GKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNEFEITNCDAILFEINE 109
G++VLD GCGSGIL +I LGA ++ D + + DN + ++T F + +
Sbjct: 164 GESVLDYGCGSGILAIAAIKLGATDVTGIDIDPQAVQASRDNAVQNQVTAA----FGLPD 219
Query: 110 KSLDSSVFKQKVDTVIMNP 128
D F V ++ NP
Sbjct: 220 TLEDGRQFDVLVANILANP 238
>sp|B7VM52|PRMA_VIBSL Ribosomal protein L11 methyltransferase OS=Vibrio splendidus
(strain LGP32) GN=prmA PE=3 SV=1
Length = 295
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDN 91
D+ GKTV+D GCGSGIL +I LGA ++ D + L DN
Sbjct: 157 DLTGKTVIDFGCGSGILAIAAIKLGAAKVVGIDIDPQALLASKDN 201
>sp|B1JKF2|PRMA_YERPY Ribosomal protein L11 methyltransferase OS=Yersinia
pseudotuberculosis serotype O:3 (strain YPIII) GN=prmA
PE=3 SV=1
Length = 293
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDN 91
D++GKT++D GCGSGIL ++ LGA ++ D + + DN
Sbjct: 156 DLNGKTLIDFGCGSGILAIAALKLGAARAIGIDIDPQAIQASRDN 200
>sp|Q8ZAX6|PRMA_YERPE Ribosomal protein L11 methyltransferase OS=Yersinia pestis GN=prmA
PE=3 SV=1
Length = 293
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDN 91
D++GKT++D GCGSGIL ++ LGA ++ D + + DN
Sbjct: 156 DLNGKTLIDFGCGSGILAIAALKLGAARAIGIDIDPQAIQASRDN 200
>sp|A7FDQ3|PRMA_YERP3 Ribosomal protein L11 methyltransferase OS=Yersinia
pseudotuberculosis serotype O:1b (strain IP 31758)
GN=prmA PE=3 SV=1
Length = 293
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDN 91
D++GKT++D GCGSGIL ++ LGA ++ D + + DN
Sbjct: 156 DLNGKTLIDFGCGSGILAIAALKLGAARAIGIDIDPQAIQASRDN 200
>sp|Q665E3|PRMA_YERPS Ribosomal protein L11 methyltransferase OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=prmA
PE=3 SV=2
Length = 293
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDN 91
D++GKT++D GCGSGIL ++ LGA ++ D + + DN
Sbjct: 156 DLNGKTLIDFGCGSGILAIAALKLGAARAIGIDIDPQAIQASRDN 200
>sp|B2K467|PRMA_YERPB Ribosomal protein L11 methyltransferase OS=Yersinia
pseudotuberculosis serotype IB (strain PB1/+) GN=prmA
PE=3 SV=1
Length = 293
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDN 91
D++GKT++D GCGSGIL ++ LGA ++ D + + DN
Sbjct: 156 DLNGKTLIDFGCGSGILAIAALKLGAARAIGIDIDPQAIQASRDN 200
>sp|Q2NWP9|PRMA_SODGM Ribosomal protein L11 methyltransferase OS=Sodalis glossinidius
(strain morsitans) GN=prmA PE=3 SV=1
Length = 293
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNE 94
D+ GKTV+D GCGSGIL ++ LGA ++ D + + DN
Sbjct: 156 DLRGKTVIDFGCGSGILAIAALKLGAAHAVGIDIDPQAILASRDNAQR 203
>sp|Q6LLY5|PRMA_PHOPR Ribosomal protein L11 methyltransferase OS=Photobacterium profundum
GN=prmA PE=3 SV=2
Length = 294
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNEFEITN 99
D+ GKT++D GCGSGIL ++ LGA+ ++ D + + DN +++
Sbjct: 157 DLVGKTIIDFGCGSGILAIAALKLGAEKVIGIDIDPQAIQASRDNAERNGVSD 209
>sp|A8GK75|PRMA_SERP5 Ribosomal protein L11 methyltransferase OS=Serratia proteamaculans
(strain 568) GN=prmA PE=3 SV=1
Length = 293
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNE 94
D+ GKT++D GCGSGIL ++ LGA ++ D + + DN
Sbjct: 156 DLAGKTIIDFGCGSGILAIAALKLGAARAIGIDIDPQAIQASRDNAQR 203
>sp|A0KNJ1|PRMA_AERHH Ribosomal protein L11 methyltransferase OS=Aeromonas hydrophila
subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=prmA
PE=3 SV=1
Length = 292
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDN 91
D+ GKTV+D GCGSGIL ++ LGA ++ D + + DN
Sbjct: 154 DLAGKTVVDFGCGSGILGIAALKLGAARVIGIDIDPQAIQASRDN 198
>sp|Q2P856|PRMA_XANOM Ribosomal protein L11 methyltransferase OS=Xanthomonas oryzae pv.
oryzae (strain MAFF 311018) GN=prmA PE=3 SV=1
Length = 313
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 46 NDIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDN--KNEFE 96
++ G++VLD GCGSGIL ++ LGA ++ D + L DN +N E
Sbjct: 168 GELQGRSVLDFGCGSGILAIAALKLGASHAVGVDYDPQALLATADNAHRNALE 220
>sp|Q0I1Y6|PRMA_HAES1 Ribosomal protein L11 methyltransferase OS=Haemophilus somnus
(strain 129Pt) GN=prmA PE=3 SV=1
Length = 296
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEIL 85
D+ GKTV+D GCGSGIL ++ LGA ++ D + +
Sbjct: 156 DLTGKTVIDFGCGSGILAIAALKLGAKSAVGIDIDPQAI 194
>sp|B0UV84|PRMA_HAES2 Ribosomal protein L11 methyltransferase OS=Haemophilus somnus
(strain 2336) GN=prmA PE=3 SV=1
Length = 296
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEIL 85
D+ GKTV+D GCGSGIL ++ LGA ++ D + +
Sbjct: 156 DLTGKTVIDFGCGSGILAIAALKLGAKSAVGIDIDPQAI 194
>sp|Q9X0G8|PRMA_THEMA Ribosomal protein L11 methyltransferase OS=Thermotoga maritima
(strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
GN=prmA PE=3 SV=1
Length = 264
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 49 DGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDN--KNEFEI 97
+G TVLD+GCG+GIL + LGA A++ D++ +++ +N KN+ ++
Sbjct: 129 EGNTVLDVGCGTGILAIAAKKLGASRVVAVDVDEQAVEVAEENVRKNDVDV 179
>sp|A4SJL7|PRMA_AERS4 Ribosomal protein L11 methyltransferase OS=Aeromonas salmonicida
(strain A449) GN=prmA PE=3 SV=1
Length = 292
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 47 DIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDN 91
D+ GKTV+D GCGSGIL ++ LGA ++ D + + DN
Sbjct: 154 DLAGKTVVDFGCGSGILGIAALKLGAARVIGIDIDPQAIQASHDN 198
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,288,167
Number of Sequences: 539616
Number of extensions: 3242122
Number of successful extensions: 10422
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 177
Number of HSP's that attempted gapping in prelim test: 9800
Number of HSP's gapped (non-prelim): 758
length of query: 216
length of database: 191,569,459
effective HSP length: 113
effective length of query: 103
effective length of database: 130,592,851
effective search space: 13451063653
effective search space used: 13451063653
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)