RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17460
(216 letters)
>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 197
Score = 145 bits (366), Expect = 1e-44
Identities = 62/209 (29%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 1 MKLK-HIEQYLQQLTFNFSNPKVHLEQYHTPPHLAATILHTIQNNYNDIDGKTVLDLGCG 59
M +K +E LQ+L N K +LEQY T AA L I N+ +I G++V+D G G
Sbjct: 1 MGIKNDLEIRLQKLQ-QQGNFKNYLEQYPTDASTAAYFLIEIYND-GNIGGRSVIDAGTG 58
Query: 60 SGILTFGSILLGADFCFALECDKEILDIFIDNKNEFEITNCDAILFEINEKSLDSSVFKQ 119
+GIL GS LLGA+ A + D + ++ N D S
Sbjct: 59 NGILACGSYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADV------------SEISG 106
Query: 120 KVDTVIMNPPFGTRNCGIDLAFVQYAADISKVVYSLHKTSTRESILKKIQAFKNVEQVDV 179
K DT IMNPPFG+ D AF+ A + S +YS+ R+ + ++ A +V
Sbjct: 107 KYDTWIMNPPFGSVVKHSDRAFIDKAFETSMWIYSIGNAKARDFLRREFSARGDVF---R 163
Query: 180 IAEMKYDLNQSYKFHKKSLHDIEVDLLRI 208
++ + + Y+ H IE + +
Sbjct: 164 EEKVYITVPRIYRHHSYDRARIEAVIFGV 192
>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon
Pyrococcus horikoshii [TaxId: 53953]}
Length = 201
Score = 135 bits (341), Expect = 1e-40
Identities = 79/209 (37%), Positives = 114/209 (54%), Gaps = 14/209 (6%)
Query: 2 KLKHIEQYLQQLTFNFSNPKVHLEQYHTPPHLAATILHTIQNNYNDIDGKTVLDLGCGSG 61
+ K + L +L F NPKV LEQY TP + A+ +L + + DI+GK V DLG G+G
Sbjct: 1 RKKELAIALSKLK-GFKNPKVWLEQYRTPGNAASELLW-LAYSLGDIEGKVVADLGAGTG 58
Query: 62 ILTFGSILLGADFCFALECDKEILDIFIDNKNEFEITNCDAILFEINEKSLDSSVFKQKV 121
+L++G++LLGA +E DKE +D+ I+N EF+ I D S F +V
Sbjct: 59 VLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIG--------DVSEFNSRV 110
Query: 122 DTVIMNPPFGTRNCGIDLAFVQYAADISKVVYSLH--KTSTRESILKKIQAFKNVEQVDV 179
D VIMNPPFG++ D F+ A +IS VVYS+H K R I K ++++ V
Sbjct: 111 DIVIMNPPFGSQRKHADRPFLLKAFEISDVVYSIHLAKPEVRRFIEKF--SWEHGFVVTH 168
Query: 180 IAEMKYDLNQSYKFHKKSLHDIEVDLLRI 208
K ++ + FH+K L I VD+ R
Sbjct: 169 RLTTKIEIPLQFFFHRKKLERITVDIYRF 197
>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 309
Score = 48.6 bits (115), Expect = 1e-07
Identities = 21/143 (14%), Positives = 45/143 (31%), Gaps = 11/143 (7%)
Query: 16 NFSNPKVHLEQYHTPPHLAATILHTIQNNYNDIDGKTVLDLGCGSGILTFGSILLGADFC 75
F + V EQ L + + VL+L +G+ + + GA+
Sbjct: 106 AFRHVGVFPEQIVHWEWLKNAVETADR-------PLKVLNLFGYTGVASLVAAAAGAEVT 158
Query: 76 FALECDKEILDIFIDNK--NEFEITNCDAILFEINEKSLDSSVFKQKVDTVIMNPP-FGT 132
++ K+ + +N+ E I + + D ++ +PP FG
Sbjct: 159 H-VDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTDPPKFGR 217
Query: 133 RNCGIDLAFVQYAADISKVVYSL 155
G + + + +
Sbjct: 218 GTHGEVWQLFDHLPLMLDICREI 240
>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase
3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 311
Score = 47.2 bits (111), Expect = 3e-07
Identities = 17/69 (24%), Positives = 28/69 (40%)
Query: 41 IQNNYNDIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNEFEITNC 100
I N + K VLD+GCG+GIL+ + GA ++ + + +
Sbjct: 27 IYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTI 86
Query: 101 DAILFEINE 109
I +I E
Sbjct: 87 TLIKGKIEE 95
>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 316
Score = 46.3 bits (109), Expect = 8e-07
Identities = 19/95 (20%), Positives = 30/95 (31%)
Query: 41 IQNNYNDIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNEFEITNC 100
+ +N + K VLD+G G+GIL + GA +EC K
Sbjct: 25 MFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV 84
Query: 101 DAILFEINEKSLDSSVFKQKVDTVIMNPPFGTRNC 135
I ++ E L + + F
Sbjct: 85 TIIKGKVEEVELPVEKVDIIISEWMGYCLFYESML 119
>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 328
Score = 43.7 bits (102), Expect = 6e-06
Identities = 22/157 (14%), Positives = 49/157 (31%), Gaps = 6/157 (3%)
Query: 41 IQNNYNDIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNEFEITNC 100
I N + K VLD+GCG+GIL+ + GA ++ I +
Sbjct: 30 IIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKI 89
Query: 101 DAILFEINEKSLDSSVFKQKVDTVIMNPPFGTRNCGIDLAFVQYAADISKVVYS------ 154
+ ++ + L + + L + +++
Sbjct: 90 TLLRGKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPDKCSIH 149
Query: 155 LHKTSTRESILKKIQAFKNVEQVDVIAEMKYDLNQSY 191
L + +K+ +++V D + L++
Sbjct: 150 LAGLEDSQYKDEKLNYWQDVYGFDYSPFVPLVLHEPI 186
>d2f8la1 c.66.1.45 (A:2-329) Hypothetical protein Lmo1582 {Listeria
monocytogenes [TaxId: 1639]}
Length = 328
Score = 38.8 bits (89), Expect = 3e-04
Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 10/135 (7%)
Query: 6 IEQYLQQLTFNFSNPKVHLEQYHTPPHLAATILHTIQNNYNDIDGKTVLDLGCGSGILTF 65
I + LQ + + TP + + + ++ ++LD CG+ L
Sbjct: 74 IRKGLQLALLKGMKHGIQVNHQMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANL-- 131
Query: 66 GSILLGADFCFALECDKEILDIFIDNKNEF-----EITNCDAILFEINEKSLDSSVFKQK 120
L L+ D ++ +D + + + + +++
Sbjct: 132 ---LTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDP 188
Query: 121 VDTVIMNPPFGTRNC 135
VD VI + P G
Sbjct: 189 VDVVISDLPVGYYPD 203
>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793
{Pyrococcus horikoshii [TaxId: 53953]}
Length = 260
Score = 37.1 bits (85), Expect = 0.001
Identities = 13/86 (15%), Positives = 28/86 (32%), Gaps = 4/86 (4%)
Query: 49 DGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNEFEITNCDAILFEIN 108
+ V+D+ G G L+ + G A+E D ++N + ++ +
Sbjct: 107 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDR----MSAY 162
Query: 109 EKSLDSSVFKQKVDTVIMNPPFGTRN 134
+ D ++M T
Sbjct: 163 NMDNRDFPGENIADRILMGYVVRTHE 188
>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 406
Score = 35.8 bits (82), Expect = 0.003
Identities = 20/106 (18%), Positives = 35/106 (33%), Gaps = 15/106 (14%)
Query: 5 HIEQYLQQLTFNFSNPKVH-LEQY---------HTPPHLAATILHTIQNNYNDIDGKTVL 54
I +L + +P+ + L+ Y P+ + + Q D T +
Sbjct: 166 FIHDFLHIVYTRSIHPQANKLKHYKAFSNYVYGELLPNFLSDVYQQCQLKKGD----TFM 221
Query: 55 DLGCGSGILTF-GSILLGADFCFALECDKEILDIFIDNKNEFEITN 99
DLG G G ++ G F E + D+ I E +
Sbjct: 222 DLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRC 267
>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus
jannaschii [TaxId: 2190]}
Length = 230
Score = 35.1 bits (80), Expect = 0.003
Identities = 26/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%)
Query: 33 LAATILHTIQNNYNDIDGKTVLDLGCGSGILTFG-SILLGADFCFALECDKEILDIFIDN 91
LAA I+ ++ +L LG +G + + +A+E I+ +D
Sbjct: 59 LAAAIIKGLKVMPIK-RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDA 117
Query: 92 KNEFEITN----------CDAILFEINEKSLDSSVFKQKVDTVIMNPPFGTRNCGIDLAF 141
E E A + E + + + + +I N + + G +
Sbjct: 118 CAERENIIPILGDANKPQEYANIVEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA 177
Query: 142 VQYAADISKVVYSLHKTSTRESILKKIQA--FKNVEQVDV 179
++ + K + + ++A FK V++VD+
Sbjct: 178 IKARSIDVTK---DPKE-IFKEQKEILEAGGFKIVDEVDI 213
>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing
protein METT10D {Human (Homo sapiens) [TaxId: 9606]}
Length = 250
Score = 34.0 bits (77), Expect = 0.008
Identities = 17/96 (17%), Positives = 35/96 (36%), Gaps = 10/96 (10%)
Query: 42 QNNYNDIDGKTVLDLGCGSGILTFGSILLGADF----CFALECDKEILDIFIDNKNEFEI 97
+ + + +D+G G+ LLGA A E D + N + +
Sbjct: 54 HQDSDKSTLRRGIDIGTGAS---CIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNL 110
Query: 98 TNCDAILFEINEKSLDSSVFK---QKVDTVIMNPPF 130
++ ++ + L ++ + D + NPPF
Sbjct: 111 SDLIKVVKVPQKTLLMDALKEESEIIYDFCMCNPPF 146
>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538
{Streptococcus pyogenes [TaxId: 1314]}
Length = 152
Score = 33.3 bits (75), Expect = 0.008
Identities = 15/55 (27%), Positives = 23/55 (41%)
Query: 46 NDIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNEFEITNC 100
+G VLDL GSG L ++ G +E +++ I DN + N
Sbjct: 11 PYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENR 65
>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT)
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 186
Score = 33.6 bits (76), Expect = 0.008
Identities = 11/72 (15%), Positives = 25/72 (34%), Gaps = 5/72 (6%)
Query: 29 TPPHLAATILHTIQNNYNDIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIF 88
T + I+ + +D+GCG+G +T +A++ + E +
Sbjct: 17 TAMEVRCLIMCLAEPG----KNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTT 71
Query: 89 IDNKNEFEITNC 100
N + +
Sbjct: 72 EMNLQRHGLGDN 83
>d1i4wa_ c.66.1.24 (A:) Transcription factor sc-mtTFB {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 322
Score = 33.9 bits (77), Expect = 0.011
Identities = 15/105 (14%), Positives = 25/105 (23%), Gaps = 17/105 (16%)
Query: 41 IQNNYNDIDGKTVLDLGCGSGILTFGSILL---GADFCFALECDKEILDIFID--NKNEF 95
+ Y + VLDL G GI + +I LE + +
Sbjct: 35 LTKTYKHPEELKVLDLYPGVGIQS--AIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPL 92
Query: 96 EITNCDAILFEINEKSLDSSVFKQKVDT----------VIMNPPF 130
+I D + +D + N
Sbjct: 93 QILKRDPYDWSTYSNLIDEERIFVPEVQSSDHINDKFLTVANVTG 137
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase
{Pseudomonas syringae [TaxId: 317]}
Length = 201
Score = 33.1 bits (74), Expect = 0.013
Identities = 10/66 (15%), Positives = 17/66 (25%), Gaps = 8/66 (12%)
Query: 23 HLEQYHTPPHLAATILHTIQNNYNDIDGKTVLDLGCGSGILTFGSILLGADFCFALECDK 82
H + + L N + G VL CG G E +
Sbjct: 1 HQSEVN--KDLQQYWSSL-----NVVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSE 52
Query: 83 EILDIF 88
++ +
Sbjct: 53 AAVERY 58
>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Human (Homo sapiens) [TaxId:
9606]}
Length = 328
Score = 33.3 bits (75), Expect = 0.014
Identities = 14/99 (14%), Positives = 26/99 (26%), Gaps = 6/99 (6%)
Query: 4 KHIEQYLQQLTFNFSNPKVHLEQY-----HTPPHLAATILHTIQNNYNDIDGKTVLDLGC 58
+ LQQ+ + L Y + ++ + + D +DLG
Sbjct: 101 GLLRHILQQVYNHSVTDPEKLNNYEPFSPEVYGETSFDLVAQMIDEIKMTDDDLFVDLGS 160
Query: 59 GSGILTFGSILLGADF-CFALECDKEILDIFIDNKNEFE 96
G G + + +E EF
Sbjct: 161 GVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFR 199
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia
coli [TaxId: 562]}
Length = 245
Score = 33.4 bits (75), Expect = 0.015
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 50 GKTVLDLGCGSGILTF 65
G +LDLG GSG +
Sbjct: 34 GTRILDLGSGSGEMLC 49
>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine
N-methyltransferase, PNMTase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 263
Score = 32.5 bits (73), Expect = 0.025
Identities = 18/157 (11%), Positives = 42/157 (26%), Gaps = 11/157 (7%)
Query: 7 EQYLQQLTFNFSNPKVHLEQYHTPPHLAATILHTIQNNYNDIDGKTVLDLGCGSGILTFG 66
YL+ N++ P+ L + L ++ G+T++D+G G +
Sbjct: 16 RAYLR---NNYAPPRGDLCNPNGVGPWKLRCLAQTFAT-GEVSGRTLIDIGSGPTVYQLL 71
Query: 67 SILLGADFCFALECDKEILDIF----IDNKNEFEITNCDAILFEINEKSLDSSVFKQKVD 122
S + + + + F + I K ++++
Sbjct: 72 SACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 131
Query: 123 TVIMNPPF---GTRNCGIDLAFVQYAADISKVVYSLH 156
+ + AD + L
Sbjct: 132 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLE 168
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus
halodurans [TaxId: 86665]}
Length = 231
Score = 32.3 bits (72), Expect = 0.026
Identities = 5/17 (29%), Positives = 8/17 (47%)
Query: 49 DGKTVLDLGCGSGILTF 65
+ VLD+ G G +
Sbjct: 15 GNEEVLDVATGGGHVAN 31
>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase
{Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}
Length = 252
Score = 32.2 bits (72), Expect = 0.035
Identities = 20/147 (13%), Positives = 47/147 (31%), Gaps = 1/147 (0%)
Query: 50 GKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNEFEIT-NCDAILFEIN 108
G +VLDLGCG G G + ++ + ++ + +
Sbjct: 25 GDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSY 84
Query: 109 EKSLDSSVFKQKVDTVIMNPPFGTRNCGIDLAFVQYAADISKVVYSLHKTSTRESILKKI 168
+ +D + + + + +D+A A + Y + +R+ IL++
Sbjct: 85 GRHMDLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERY 144
Query: 169 QAFKNVEQVDVIAEMKYDLNQSYKFHK 195
+ + I K + +
Sbjct: 145 KQGRMSNDFYKIELEKMEDVPMESVRE 171
>d2ih2a1 c.66.1.27 (A:21-243) DNA methylase TaqI, N-terminal domain
{Thermus aquaticus [TaxId: 271]}
Length = 223
Score = 32.0 bits (71), Expect = 0.036
Identities = 15/112 (13%), Positives = 25/112 (22%), Gaps = 18/112 (16%)
Query: 29 TPPHLAATILHTIQNNYNDIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILD-I 87
TPP + ++ + G VL+ C G F +
Sbjct: 3 TPPEVVDFMVSLAEAP----RGGRVLEPACAHG-------------PFLRAFREAHGTAY 45
Query: 88 FIDNKNEFEITNCDAILFEINEKSLDSSVFKQKVDTVIMNPPFGTRNCGIDL 139
E + D ++ NPP+G
Sbjct: 46 RFVGVEIDPKALDLPPWAEGILADFLLWEPGEAFDLILGNPPYGIVGEASKY 97
>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371
{Clostridium acetobutylicum [TaxId: 1488]}
Length = 246
Score = 31.2 bits (69), Expect = 0.072
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 46 NDIDGKTVLDLGCGSGILTF 65
N++ LDL CG+G LT
Sbjct: 34 NNLVFDDYLDLACGTGNLTE 53
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 292
Score = 31.1 bits (69), Expect = 0.090
Identities = 12/84 (14%), Positives = 23/84 (27%), Gaps = 3/84 (3%)
Query: 50 GKTVLDLGCGSGILTFGSILLGADFC---FALECDKEILDIFIDNKNEFEITNCDAILFE 106
VLD+ CG+G+ + + G + + K L + + E
Sbjct: 57 CHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEAN 116
Query: 107 INEKSLDSSVFKQKVDTVIMNPPF 130
D + + F
Sbjct: 117 WLTLDKDVPAGDGFDAVICLGNSF 140
>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus
subtilis [TaxId: 1423]}
Length = 234
Score = 30.7 bits (68), Expect = 0.10
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 50 GKTVLDLGCGSGILTF 65
VLD+G G+G
Sbjct: 17 EHRVLDIGAGAGHTAL 32
>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305
{Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Length = 251
Score = 30.5 bits (67), Expect = 0.14
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 38 LHTIQNNYNDIDGKTVLDLGCGSGILTF 65
+ I + + VLDL CG+GI T
Sbjct: 30 VEEIFKEDAKREVRRVLDLACGTGIPTL 57
>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB
{Salmonella typhimurium [TaxId: 90371]}
Length = 198
Score = 29.9 bits (66), Expect = 0.15
Identities = 12/52 (23%), Positives = 17/52 (32%)
Query: 25 EQYHTPPHLAATILHTIQNNYNDIDGKTVLDLGCGSGILTFGSILLGADFCF 76
E Y T + + + LDLGCG+G + G D
Sbjct: 6 ENYFTEKYGLTRTHSDVLAAAKVVAPGRTLDLGCGNGRNSLYLAANGYDVTA 57
>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 264
Score = 30.3 bits (68), Expect = 0.15
Identities = 22/96 (22%), Positives = 35/96 (36%), Gaps = 14/96 (14%)
Query: 31 PHLAATILHTIQNNYNDIDGKTVLDLGCGSGILTFG-SILLGADF-CFALECDKEILDIF 88
P AA I+H + G VL+ G GSG LT +G + E + +
Sbjct: 82 PKDAAQIVHEG----DIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHA 137
Query: 89 IDNKNEF--------EITNCDAILFEINEKSLDSSV 116
N + + D E+ + S+D +V
Sbjct: 138 RRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAV 173
>d2c7pa1 c.66.1.26 (A:1-327) DNA methylase HhaI {Haemophilus
haemolyticus [TaxId: 726]}
Length = 327
Score = 30.0 bits (66), Expect = 0.23
Identities = 17/100 (17%), Positives = 33/100 (33%), Gaps = 3/100 (3%)
Query: 41 IQNNYNDIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDN---KNEFEI 97
I+ + G +DL G G GA+ ++ E DK +++ N K E +I
Sbjct: 2 IEIKDKQLTGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKPEGDI 61
Query: 98 TNCDAILFEINEKSLDSSVFKQKVDTVIMNPPFGTRNCGI 137
T + ++ + + +R
Sbjct: 62 TQVNEKTIPDHDILCAGFPCQAFSISGKQKGFEDSRGTLF 101
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus
cereus [TaxId: 1396]}
Length = 281
Score = 29.5 bits (65), Expect = 0.29
Identities = 6/25 (24%), Positives = 10/25 (40%)
Query: 41 IQNNYNDIDGKTVLDLGCGSGILTF 65
+ + ++D GCG G L
Sbjct: 19 VNTVWKITKPVHIVDYGCGYGYLGL 43
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein
KsgA {Escherichia coli [TaxId: 562]}
Length = 252
Score = 29.1 bits (64), Expect = 0.35
Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 37 ILHTIQNNYNDIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKE---ILDIFIDNKN 93
++ +I + N G+ ++++G G LT + D +E D++ L
Sbjct: 9 VIDSIVSAINPQKGQAMVEIGPGLAALTE-PVGERLDQLTVIELDRDLAARLQTHPFLGP 67
Query: 94 EFEITNCDAILFEIN 108
+ I DA+ F
Sbjct: 68 KLTIYQQDAMTFNFG 82
>d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis,
Ermc' [TaxId: 1423]}
Length = 235
Score = 29.1 bits (64), Expect = 0.39
Identities = 14/76 (18%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 37 ILHTIQNNYNDIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKE---ILDIFIDNKN 93
+ I N + + ++G G G T ++ +F A+E D + + + + +
Sbjct: 9 NIDKIMTNIRLNEHDNIFEIGSGKGHFTL-ELVQRCNFVTAIEIDHKLCKTTENKLVDHD 67
Query: 94 EFEITNCDAILFEINE 109
F++ N D + F+ +
Sbjct: 68 NFQVLNKDILQFKFPK 83
>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738
{Erwinia carotovora [TaxId: 554]}
Length = 225
Score = 28.7 bits (63), Expect = 0.45
Identities = 5/26 (19%), Positives = 9/26 (34%)
Query: 39 HTIQNNYNDIDGKTVLDLGCGSGILT 64
++ +L+LG G T
Sbjct: 10 FMVRAFTPFFRPGNLLELGSFKGDFT 35
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia
coli [TaxId: 562]}
Length = 268
Score = 28.8 bits (63), Expect = 0.48
Identities = 16/89 (17%), Positives = 29/89 (32%), Gaps = 2/89 (2%)
Query: 26 QYHTPPHLAATILHTIQNNYNDIDGKTVLDLGCGSGILTFGSILLGADF-CFALECDKEI 84
L I+ ++ +D VLD+GCG G T + F L+ K
Sbjct: 62 DAGHYQPLRDAIVAQLRERLDD-KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVA 120
Query: 85 LDIFIDNKNEFEITNCDAILFEINEKSLD 113
+ + + ++ S+D
Sbjct: 121 IKAAAKRYPQVTFCVASSHRLPFSDTSMD 149
>d2oyra1 c.66.1.55 (A:1-250) Hypothetical protein YhiQ {Shigella
flexneri [TaxId: 623]}
Length = 250
Score = 28.4 bits (63), Expect = 0.49
Identities = 13/101 (12%), Positives = 26/101 (25%), Gaps = 27/101 (26%)
Query: 50 GKTVLDLGCGSGILTFGSILLGA----------------DFCFALECDKEILDIFIDNKN 93
V+D G G F +G D D EI +
Sbjct: 89 LPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQER-- 146
Query: 94 EFEITNCDAILFEINEKSLDSSVFKQKVDTVIMNPPFGTRN 134
++ + ++ + + V ++P F +
Sbjct: 147 -LQLIHASSLTALTD--------ITPRPQVVYLDPMFPHKQ 178
>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 324
Score = 28.6 bits (63), Expect = 0.49
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 6/36 (16%)
Query: 31 PHLAATILHTIQNNYNDID-GKTVLDLGCGSGILTF 65
P IL + DI+ G TVL+ G GSG ++
Sbjct: 84 PKDINMILSMM-----DINPGDTVLEAGSGSGGMSL 114
>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus
horikoshii [TaxId: 53953]}
Length = 227
Score = 28.2 bits (62), Expect = 0.63
Identities = 25/156 (16%), Positives = 52/156 (33%), Gaps = 10/156 (6%)
Query: 33 LAATILHTIQNNYNDIDGKTVLDLGCGSGILTF--GSILLGADFCFALECDKEILDIFID 90
L A I++ ++N GK+VL LG SG I+ F +E +L +
Sbjct: 58 LGAAIMNGLKNFPIK-PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVP 116
Query: 91 NKNEFEITNCDAILFEINEKSLDSSVFKQKVDTVIMNPPFGTRNCGIDLAFVQYAADISK 150
E E+ + + P +++
Sbjct: 117 IVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMI 176
Query: 151 VVYSLHKTSTR--ESILKKIQA-----FKNVEQVDV 179
V S T+ E + ++++ F+ +E++++
Sbjct: 177 AVKSRSIDVTKEPEQVFREVERELSEYFEVIERLNL 212
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin
dehydrogenase {Methylobacterium extorquens [TaxId:
408]}
Length = 191
Score = 27.9 bits (61), Expect = 0.63
Identities = 5/29 (17%), Positives = 11/29 (37%)
Query: 34 AATILHTIQNNYNDIDGKTVLDLGCGSGI 62
AA + ++ + GK + L +
Sbjct: 7 AAGVALVVKAAGGSVKGKKAVVLAGTGPV 35
>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein
reductase {Malaria parasite (Plasmodium falciparum)
[TaxId: 5833]}
Length = 251
Score = 28.4 bits (63), Expect = 0.64
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 42 QNNYNDIDGKTVLDLGCGSGI 62
+N Y + K L G G GI
Sbjct: 2 ENYYYCGENKVALVTGAGRGI 22
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 280
Score = 28.4 bits (62), Expect = 0.65
Identities = 11/126 (8%), Positives = 37/126 (29%)
Query: 32 HLAATILHTIQNNYNDIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDN 91
+ + I + +L +G G+G + + + + E+++ +
Sbjct: 23 FMDKKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQ 82
Query: 92 KNEFEITNCDAILFEINEKSLDSSVFKQKVDTVIMNPPFGTRNCGIDLAFVQYAADISKV 151
+++ E + + + ++ + + + Y DI
Sbjct: 83 IAKYKELVAKISNLENVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDIPAT 142
Query: 152 VYSLHK 157
+ H
Sbjct: 143 LKFFHS 148
>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon
Methanococcus jannaschii [TaxId: 2190]}
Length = 194
Score = 28.1 bits (61), Expect = 0.66
Identities = 27/134 (20%), Positives = 48/134 (35%), Gaps = 12/134 (8%)
Query: 50 GKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNEFEITNCDAILFEINE 109
+LDLGCG G++ L + D I + +N ++ N D +
Sbjct: 53 DDDILDLGCGYGVIGI---ALADEVKSTTMADINRRAIKLAKEN-IKLNNLDNYDIRVVH 108
Query: 110 KSLDSSVFKQKVDTVIMNPPFGTRNCGIDLAFVQYAADISK------VVYSLHKTSTRES 163
L +V +K + +I NPP + + + V+ + +
Sbjct: 109 SDLYENVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAK 168
Query: 164 ILKKIQAFKNVEQV 177
+K + F NVE V
Sbjct: 169 YMKDV--FGNVETV 180
>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase
{Streptomyces hydrogenans [TaxId: 1905]}
Length = 254
Score = 28.4 bits (63), Expect = 0.66
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 46 NDIDGKTVLDLGCGSGI 62
ND+ GKTV+ G G+
Sbjct: 1 NDLSGKTVIITGGARGL 17
>d1zq9a1 c.66.1.24 (A:36-313) Probable dimethyladenosine transferase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 278
Score = 28.3 bits (62), Expect = 0.67
Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 37 ILHTIQNNYNDIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNEFE 96
I+++I + VL++G G+G +T +L A A E D ++
Sbjct: 9 IINSIIDKAALRPTDVVLEVGPGTGNMT-VKLLEKAKKVVACELDPRLVAELHKRVQGTP 67
Query: 97 ITNC 100
+ +
Sbjct: 68 VASK 71
>d1g55a_ c.66.1.26 (A:) DNMT2 {Human (Homo sapiens) [TaxId: 9606]}
Length = 343
Score = 28.1 bits (61), Expect = 0.83
Identities = 14/81 (17%), Positives = 30/81 (37%), Gaps = 8/81 (9%)
Query: 52 TVLDLGCGSGILTFGSILLG--ADFCFALECDKEILDIFIDNKNEFEITNCDAILFEINE 109
VL+L G G + A A++ + +++ N ++ + I
Sbjct: 4 RVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKT--IEGITL 61
Query: 110 KSLDSSVFKQKVDTVIMNPPF 130
+ D + D ++M+PP
Sbjct: 62 EEFD----RLSFDMILMSPPC 78
>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium
[TaxId: 1404]}
Length = 261
Score = 27.8 bits (61), Expect = 0.86
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 45 YNDIDGKTVLDLGCGSGI 62
Y D++GK V+ G +G+
Sbjct: 2 YKDLEGKVVVITGSSTGL 19
>d1ej0a_ c.66.1.2 (A:) RNA methyltransferase FtsJ {Escherichia coli
[TaxId: 562]}
Length = 180
Score = 27.1 bits (59), Expect = 1.1
Identities = 23/152 (15%), Positives = 41/152 (26%), Gaps = 8/152 (5%)
Query: 34 AATILHTIQNNYNDID-GKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNK 92
A L IQ + G TV+DLG G + D+ +
Sbjct: 6 AWFKLDEIQQSDKLFKPGMTVVDLGAAP-----GGWSQYVVTQIGGKGRIIACDLLPMDP 60
Query: 93 NEFEITNCDAILFEINEKSLDSSVFKQKVDTVIMNPPFGTRNCGIDLAFVQYAADISKVV 152
E+ K+L V KV V+ + +
Sbjct: 61 IVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALE 120
Query: 153 YSLHKTSTRESILKKIQAFKNVEQVDVIAEMK 184
+ S + K+ F+ + + E++
Sbjct: 121 MCRDVLAPGGSFVVKV--FQGEGFDEYLREIR 150
>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa
(LmjF30.0810) {Leishmania major [TaxId: 5664]}
Length = 254
Score = 27.6 bits (60), Expect = 1.2
Identities = 10/58 (17%), Positives = 16/58 (27%)
Query: 43 NNYNDIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNEFEITNC 100
+ LD G G G +T + LE K +L+ +
Sbjct: 87 ASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKF 144
>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase
domain {Thermotoga maritima [TaxId: 2336]}
Length = 192
Score = 27.4 bits (60), Expect = 1.2
Identities = 27/157 (17%), Positives = 52/157 (33%), Gaps = 16/157 (10%)
Query: 24 LEQYHTPPHLAATILHTIQNNYNDIDGKTVLDLGCGSGILTFGSILLGAD-FCFALECDK 82
Q H P ++ + D K +LD G G + + ++ D
Sbjct: 3 YSQRHIP-----VMVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDS 57
Query: 83 EILDIFIDNKNEFEITNCDAILFEINEKSLDSSVFKQKVDTVIMNPP-------FGTRNC 135
E+L I + EF + L ++ +KVD ++M+ R
Sbjct: 58 EVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILMDLGVSTYQLKGENREL 117
Query: 136 GIDLAFVQYAADISK---VVYSLHKTSTRESILKKIQ 169
F++ A D+ + + S + I+K+
Sbjct: 118 ENLKEFLKKAEDLLNPGGRIVVISFHSLEDRIVKETF 154
>d2qrdb1 d.353.1.1 (B:205-297) AMP-activated protein kinase beta
subunit {Schizosaccharomyces pombe [TaxId: 4896]}
Length = 93
Score = 26.0 bits (57), Expect = 1.4
Identities = 8/40 (20%), Positives = 16/40 (40%)
Query: 7 EQYLQQLTFNFSNPKVHLEQYHTPPHLAATILHTIQNNYN 46
EQY ++ ++ + + PP L + I N+
Sbjct: 2 EQYSTEIPAFLTSNTLQELKLPKPPSLPPHLEKCILNSNT 41
>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852
{Thermoplasma acidophilum [TaxId: 2303]}
Length = 250
Score = 27.3 bits (60), Expect = 1.4
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 50 GKTVLDLGCGSGILTF 65
G +L++G GSG ++
Sbjct: 86 GMDILEVGVGSGNMSS 101
>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase,
INMT {Human (Homo sapiens) [TaxId: 9606]}
Length = 257
Score = 27.3 bits (59), Expect = 1.5
Identities = 18/152 (11%), Positives = 41/152 (26%), Gaps = 14/152 (9%)
Query: 19 NPKVHLEQYHTPP---HLAATILHTIQNNY------NDIDGKTVLDLGCGSGILTFGSIL 69
P+ +L Y++ A +L + G T++D+G G I +
Sbjct: 12 LPRDYLATYYSFDGSPSPEAEMLKFNLECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAAC 71
Query: 70 LGADFCFALECDKEILDIFIDNKNE----FEITNCDAILFEINEKSLDSSVFKQKVDTVI 125
+ + + ++ T E+ S ++K+ +
Sbjct: 72 DSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAV 131
Query: 126 MN-PPFGTRNCGIDLAFVQYAADISKVVYSLH 156
V AD + ++
Sbjct: 132 KRVLKCDVHLGNPLAPAVLPLADCVLTLLAME 163
>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus
fulgidus [TaxId: 2234]}
Length = 209
Score = 27.0 bits (59), Expect = 1.7
Identities = 23/160 (14%), Positives = 52/160 (32%), Gaps = 20/160 (12%)
Query: 33 LAATILHTIQNNYNDIDGKTVLDLGCGSGILTF-------GSILLGADFCFALECDKEIL 85
LAA IL + VL LG SG I+ ++ + +++L
Sbjct: 42 LAAMILKGH--RLKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSA--KPFEKLL 97
Query: 86 DIFIDNKN-EFEITNCDAILFEINEKSLDSSVF-----KQKVDTVIMNPPFGTRNCGIDL 139
++ + N + + ++ K +++ + N F + G +
Sbjct: 98 ELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVV 157
Query: 140 AFVQYAADISKVVYSLHKTSTRESILKKIQAFKNVEQVDV 179
V+ + S + + + + FK V+ +
Sbjct: 158 IMVKARSIDSTA---EPEEVFKSVLKEMEGDFKIVKHGSL 194
>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase,
PGDH {Human (Homo sapiens) [TaxId: 9606]}
Length = 254
Score = 26.9 bits (59), Expect = 1.8
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 48 IDGKTVLDLGCGSGI 62
++GK L G GI
Sbjct: 1 VNGKVALVTGAAQGI 15
>d1yuba_ c.66.1.24 (A:) rRNA adenine dimethylase {Streptococcus
pneumoniae, Ermam [TaxId: 1313]}
Length = 245
Score = 26.4 bits (57), Expect = 2.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 37 ILHTIQNNYNDIDGKTVLDLGCGSGILT 64
+L+ I N + TV ++G G G LT
Sbjct: 17 VLNQIIKQLNLKETDTVYEIGTGKGHLT 44
>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB
{Streptomyces purpurascens [TaxId: 1924]}
Length = 256
Score = 26.5 bits (57), Expect = 2.4
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 51 KTVLDLGCGSGILTF 65
+ VLD+G G+G +
Sbjct: 83 RHVLDVGGGNGGMLA 97
>d1dcta_ c.66.1.26 (A:) DNA methylase HaeIII {Haemophilus aegyptius
[TaxId: 197575]}
Length = 324
Score = 26.5 bits (57), Expect = 2.6
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Query: 53 VLDLGCGSGILTFGSILLGADFCFALECDKEILDIFIDNKNEFEITNCD 101
++ L G+G L G G A E DK I + N + ++ D
Sbjct: 3 LISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHSA-KLIKGD 50
>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga
maritima [TaxId: 2336]}
Length = 266
Score = 26.2 bits (57), Expect = 2.9
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 4/35 (11%)
Query: 31 PHLAATILHTIQNNYNDIDGKTVLDLGCGSGILTF 65
P ++ I + G ++D G GSG +
Sbjct: 89 PKDSSFIAMMLDVKE----GDRIIDTGVGSGAMCA 119
>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA
methyltransferase Trm1 {Pyrococcus horikoshii [TaxId:
53953]}
Length = 375
Score = 26.5 bits (58), Expect = 3.0
Identities = 17/109 (15%), Positives = 34/109 (31%), Gaps = 14/109 (12%)
Query: 46 NDIDGKTVLDLGCGSGILTFGSIL-LGADFCFALECDKEILDIFIDNKNEFEITNCDAIL 104
N ++ K VLD +GI L A+ + + ++ ++ N
Sbjct: 42 NILNPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESK 101
Query: 105 FEINEKSLDSSVF------------KQKVDTVIMNPPFGTRNCGIDLAF 141
K + V + + ++ PFG+ +D A
Sbjct: 102 GRAILKGEKTIVINHDDANRLMAERHRYFHFIDLD-PFGSPMEFLDTAL 149
>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase,
GABA-aminotransferase {Escherichia coli [TaxId: 562]}
Length = 425
Score = 26.3 bits (57), Expect = 3.3
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 47 DIDGKTVLDLGCGSGILTFG 66
D++G+ LD G +L G
Sbjct: 36 DVEGREYLDFAGGIAVLNTG 55
>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 224
Score = 26.0 bits (56), Expect = 3.6
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 50 GKTVLDLGCGSGILT--FGSILLGADFCFALECDKEILDIFIDNKNEFEITNC 100
G LD+G GSGILT F ++ ++ KE++D ++N + + T
Sbjct: 77 GAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLL 129
>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase
{Escherichia coli [TaxId: 562]}
Length = 243
Score = 25.9 bits (56), Expect = 3.7
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 47 DIDGKTVLDLGCGSGI 62
+ +GK L G GI
Sbjct: 1 NFEGKIALVTGASRGI 16
>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase
(aminotransferase) {Synechococcus sp., strain GR6
[TaxId: 1131]}
Length = 427
Score = 26.0 bits (56), Expect = 3.8
Identities = 6/20 (30%), Positives = 8/20 (40%)
Query: 47 DIDGKTVLDLGCGSGILTFG 66
D+DG +D G G
Sbjct: 48 DVDGNRYIDYVGTWGPAICG 67
>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase
TrmB {Streptococcus pneumoniae [TaxId: 1313]}
Length = 204
Score = 25.6 bits (55), Expect = 4.0
Identities = 16/113 (14%), Positives = 35/113 (30%), Gaps = 5/113 (4%)
Query: 49 DGKTVLDLGCGSGILTFGSILLGAD-FCFALECDKEILDIFIDNKNEFEITNCDAILF-- 105
D +++G G G G D ++ K +L +D E + N +
Sbjct: 31 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDG 90
Query: 106 -EINEKSLDSSVFKQKVDTVIMNPPFGT-RNCGIDLAFVQYAADISKVVYSLH 156
++ + D + + ++ P + F+ I +H
Sbjct: 91 SDLTDYFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIH 143
>d2vo1a1 c.37.1.10 (A:1-273) CTP synthase PyrG, N-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 273
Score = 25.6 bits (56), Expect = 4.3
Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
Query: 162 ESILKKIQAFKNVEQVDVIAEMKYDLNQSYK----FHKKSLHDIEVDLLRI 208
S+ +KI F +VE VI +D++ Y+ ++ + D + L +
Sbjct: 224 TSVKEKISMFCHVEPEQVICV--HDVSSIYRVPLLLEEQGVVDYFLRRLDL 272
>d1vcoa2 c.37.1.10 (A:11-282) CTP synthase PyrG, N-terminal domain
{Thermus thermophilus [TaxId: 274]}
Length = 272
Score = 25.6 bits (56), Expect = 4.9
Identities = 9/51 (17%), Positives = 18/51 (35%), Gaps = 6/51 (11%)
Query: 162 ESILKKIQAFKNVEQVDVIAEMKYDLNQSYK----FHKKSLHDIEVDLLRI 208
E + +K+ F NV V + + Y+ ++ L L +
Sbjct: 219 EEVRRKVALFTNVRPGHVFSS--PTVEHLYEVPLLLEEQGLGRAVERALGL 267
>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI
{Human (Homo sapiens) [TaxId: 9606]}
Length = 244
Score = 25.3 bits (55), Expect = 5.1
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 47 DIDGKTVLDLGCGSGI 62
+ G+ VL G G GI
Sbjct: 4 SVTGEIVLITGAGHGI 19
>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836)
{Thermus thermophilus [TaxId: 274]}
Length = 254
Score = 25.6 bits (55), Expect = 5.2
Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Query: 29 TPPHLAATILHTIQNNYNDIDGKTVLDLGCGSGILTFGSILLGADFCFALECDKEILDI 87
H T L + G VLDLG GSG+L + LG ++ D +L
Sbjct: 100 GTGHHETTRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKLGGK-ALGVDIDPMVLPQ 157
>d1mtyg_ a.23.3.1 (G:) Methane monooxygenase hydrolase, gamma
subunit {Methylococcus capsulatus [TaxId: 414]}
Length = 162
Score = 25.3 bits (55), Expect = 5.5
Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 155 LHKTSTRESILKKIQAFKNVEQVDVIAEMKYDLNQSYKFHKKSLHDIEVDLLRI 208
+H TR++ + KI +E+ AEM + ++ ++++ D L I
Sbjct: 3 IHSNDTRDAWVNKIAHVNTLEKA---AEMLKQFRMDHTTPFRNSYELDNDYLWI 53
>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine
aminotransferase ArgD {Thermus thermophilus [TaxId:
274]}
Length = 387
Score = 25.5 bits (55), Expect = 5.8
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 47 DIDGKTVLDLGCGSGILTFG 66
D +G +D G G+ G
Sbjct: 33 DAEGNEYIDCVGGYGVANLG 52
>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly
(Drosophila lebanonensis) [TaxId: 7225]}
Length = 254
Score = 25.4 bits (55), Expect = 6.3
Identities = 5/16 (31%), Positives = 8/16 (50%)
Query: 47 DIDGKTVLDLGCGSGI 62
D+ K V+ + GI
Sbjct: 2 DLTNKNVIFVAALGGI 17
>d2fcaa1 c.66.1.53 (A:10-213) tRNA
(guanine-N(7)-)-methyltransferase TrmB {Bacillus
subtilis [TaxId: 1423]}
Length = 204
Score = 24.8 bits (53), Expect = 7.1
Identities = 4/17 (23%), Positives = 7/17 (41%)
Query: 49 DGKTVLDLGCGSGILTF 65
D +++G G G
Sbjct: 29 DNPIHIEVGTGKGQFIS 45
>d2foka4 c.52.1.12 (A:387-579) Restriction endonuclease FokI,
C-terminal (catalytic) domain {Flavobacterium
okeanokoites [TaxId: 244]}
Length = 193
Score = 24.9 bits (54), Expect = 7.3
Identities = 10/54 (18%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Query: 43 NNYNDIDGKTVLDLGCGSGILTFGSILLGADFCFALECD-KEILDIFIDNKNEF 95
NY + C +L+ +L+G + A +E+ F + + F
Sbjct: 140 GNYKAQLTRLNHITNCNGAVLSVEELLIGGEMIKAGTLTLEEVRRKFNNGEINF 193
>d1mhyg_ a.23.3.1 (G:) Methane monooxygenase hydrolase, gamma
subunit {Methylosinus trichosporium [TaxId: 426]}
Length = 167
Score = 24.9 bits (54), Expect = 7.6
Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Query: 155 LHKTSTRESILKKIQAFKNVEQVDVIAEMKYDLNQSYKFHKKSLHDIEVDLLRI 208
+H S R KI +V+Q + D +Y + +DI+VD I
Sbjct: 6 IHDNSIRTEWEAKIAKLTSVDQA---TKFIQDFRLAYTSPFRKSYDIDVDYQYI 56
>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase
{Pseudomonas cepacia [TaxId: 292]}
Length = 431
Score = 25.0 bits (53), Expect = 7.8
Identities = 7/20 (35%), Positives = 9/20 (45%)
Query: 47 DIDGKTVLDLGCGSGILTFG 66
D DG+ +LD G G
Sbjct: 37 DADGRAILDFTSGQMSAVLG 56
>d1j8ua_ d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Human (Homo
sapiens) [TaxId: 9606]}
Length = 307
Score = 24.7 bits (54), Expect = 8.7
Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 11/79 (13%)
Query: 58 CGSGILT-FGSILLGADFCFALECDKEILDIFIDNKNEFEITNCDAILFEINEKSLD--S 114
G+G+L+ FG +C + + L++ + +T + + S +
Sbjct: 226 YGAGLLSSFGE----LQYCLSEKPKLLPLELEKTAIQNYTVTEFQPLYYVAE--SFNDAK 279
Query: 115 SVFKQKVDTVIMNPPFGTR 133
+ T + PF R
Sbjct: 280 EKVRNFAAT--IPRPFSVR 296
>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB
{Escherichia coli [TaxId: 562]}
Length = 182
Score = 24.6 bits (52), Expect = 9.1
Identities = 17/143 (11%), Positives = 39/143 (27%), Gaps = 2/143 (1%)
Query: 38 LHTIQNNYNDIDGKTVLDLGCG--SGILTFGSILLGADFCFALECDKEILDIFIDNKNEF 95
+ I+ + DI GKT++ LG G S + + G E D +
Sbjct: 6 IRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRV 65
Query: 96 EITNCDAILFEINEKSLDSSVFKQKVDTVIMNPPFGTRNCGIDLAFVQYAADISKVVYSL 155
+ + D + G + + + ++ +
Sbjct: 66 NENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTE 125
Query: 156 HKTSTRESILKKIQAFKNVEQVD 178
+ + L + + +D
Sbjct: 126 CVYNPHMTKLLQQAQQAGCKTID 148
>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase,
GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}
Length = 461
Score = 25.0 bits (53), Expect = 9.6
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 47 DIDGKTVLDLGCGSGILTFG 66
D+DG +LDL + G
Sbjct: 49 DVDGNRMLDLYSQISSIPIG 68
>d1s1ma2 c.37.1.10 (A:1-266) CTP synthase PyrG, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 266
Score = 24.8 bits (54), Expect = 9.7
Identities = 12/51 (23%), Positives = 19/51 (37%), Gaps = 6/51 (11%)
Query: 162 ESILKKIQAFKNVEQVDVIAEMKYDLNQSYK----FHKKSLHDIEVDLLRI 208
+ KI F NV + VI+ D++ YK + L D +
Sbjct: 218 ANERAKIALFCNVPEKAVISL--KDVDSIYKIPGLLKSQGLDDYICKRFSL 266
>d1eg2a_ c.66.1.11 (A:) m.RsrI N6 adenosine-specific DNA
methyltransferase {Rhodobacter sphaeroides [TaxId:
1063]}
Length = 279
Score = 24.7 bits (52), Expect = 10.0
Identities = 12/83 (14%), Positives = 23/83 (27%), Gaps = 1/83 (1%)
Query: 14 TFNFSNPKVHLEQYHTPPHLAATILHTIQNNYNDIDGKTVLDLGCGSGILTFGSILLGAD 73
+ S + + P + G TVLD GSG+ +I G +
Sbjct: 172 VWRMSRLNGNSLERVGHPTQKPAAVIERLVRALSHPGSTVLDFFAGSGVTARVAIQEGRN 231
Query: 74 FCFALECDKEILDIFIDNKNEFE 96
+ + + +
Sbjct: 232 S-ICTDAAPVFKEYYQKQLTFLQ 253
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.137 0.397
Gapped
Lambda K H
0.267 0.0615 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 806,412
Number of extensions: 37202
Number of successful extensions: 261
Number of sequences better than 10.0: 1
Number of HSP's gapped: 255
Number of HSP's successfully gapped: 92
Length of query: 216
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 134
Effective length of database: 1,281,736
Effective search space: 171752624
Effective search space used: 171752624
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (23.7 bits)