BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17467
(730 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357616343|gb|EHJ70140.1| putative membrane-associated protein gex-3 [Danaus plexippus]
Length = 1074
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 129/146 (88%), Positives = 138/146 (94%)
Query: 403 EIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESR 462
EIIKPGAESYRKTREELTTMDKLHMALTELCFAINYC+ + VW++TFAPREYLHQHLE+R
Sbjct: 605 EIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCSTVNVWEYTFAPREYLHQHLENR 664
Query: 463 FSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQR 522
FS+ALVGMVMFN DTSEIAKPSELL SVRAYMNVLQTVENYVHID+TRVFNN LLQQTQ
Sbjct: 665 FSKALVGMVMFNQDTSEIAKPSELLVSVRAYMNVLQTVENYVHIDITRVFNNCLLQQTQS 724
Query: 523 MDSHGEKTVAALYIQWYSEVLLRRVS 548
DSHGEKT+AALY QWYSE+LLRRVS
Sbjct: 725 CDSHGEKTIAALYTQWYSEILLRRVS 750
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/77 (76%), Positives = 69/77 (89%)
Query: 267 MLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKSVSGISQIRSDIVKSL 326
MLTRIYNIKKACGDAKSKP+FLSDK+LES IK IV++FPNID+K + I+ IR++I+KSL
Sbjct: 1 MLTRIYNIKKACGDAKSKPAFLSDKTLESSIKHIVRRFPNIDVKGLQAITNIRNEIIKSL 60
Query: 327 SLYYYTFVDLLHFKDCV 343
SLYYYTFVDLL FKD V
Sbjct: 61 SLYYYTFVDLLDFKDNV 77
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 62/76 (81%)
Query: 125 KIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEACF 184
++++EM SAAGL C VDP LA++L K +L+E+EH++ CLLMVFVAV +P+LARNE F
Sbjct: 902 RVISEMCSAAGLSCKVDPTLASSLRQHKAELEEEEHLIVCLLMVFVAVSLPRLARNEGSF 961
Query: 185 YLASLEGHSNNIHCMA 200
Y SLEGH+NNIHCMA
Sbjct: 962 YRPSLEGHANNIHCMA 977
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 83/160 (51%), Gaps = 19/160 (11%)
Query: 560 FLRVYTVENYV-HIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNI 618
FL T+E+ + HI R F N ++ Q + + + + +L + +Y+ V L N+
Sbjct: 21 FLSDKTLESSIKHI--VRRFPNIDVKGLQAITNIRNEIIKSLSLYYYTFVDLLDFK-DNV 77
Query: 619 CFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYG--MKLLNELS-----LKA 671
C LN LT + + F + DL+ Y M LL+ + L
Sbjct: 78 CELLNIIDGCQLTLDLTLNFELT--------KNYLDLVTTYVALMILLSRVEDRKAVLGL 129
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
FNAAHEMVHNQ D +FPRLGQMI+DY+ P KKLSEEF PH
Sbjct: 130 FNAAHEMVHNQIDASFPRLGQMIVDYDAPFKKLSEEFAPH 169
>gi|322786599|gb|EFZ12994.1| hypothetical protein SINV_07486 [Solenopsis invicta]
Length = 1121
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 125/150 (83%), Positives = 138/150 (92%)
Query: 403 EIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESR 462
EI KPG ESYRKTREELTTMDKLHMALTELC+AINYC I VW++TFAPREYLHQHLESR
Sbjct: 655 EIHKPGIESYRKTREELTTMDKLHMALTELCYAINYCPTINVWEYTFAPREYLHQHLESR 714
Query: 463 FSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQR 522
F+RALVGMVM+NPDTSEIAKPSEL SVR+YMNVLQT+ENYVHID+TRVFNNALLQQTQ
Sbjct: 715 FARALVGMVMYNPDTSEIAKPSELFVSVRSYMNVLQTIENYVHIDITRVFNNALLQQTQE 774
Query: 523 MDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
+DSHG+KT+AALY QWYS+VLLRRVS +
Sbjct: 775 LDSHGDKTIAALYTQWYSDVLLRRVSAGNI 804
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/121 (75%), Positives = 107/121 (88%), Gaps = 2/121 (1%)
Query: 546 RVSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWY 605
+ SE V + +N L+ T+ENYVHID+TRVFNNALLQQTQ +DSHG+KT+AALY QWY
Sbjct: 734 KPSELFVSVRSYMNVLQ--TIENYVHIDITRVFNNALLQQTQELDSHGDKTIAALYTQWY 791
Query: 606 SEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLN 665
S+VLLRRVSAGNIC+S NQRAFVSL+ EGAIPFNAEEFSD+NELR+LA+LIGPYGMK+LN
Sbjct: 792 SDVLLRRVSAGNICYSANQRAFVSLSVEGAIPFNAEEFSDINELRSLAELIGPYGMKMLN 851
Query: 666 E 666
E
Sbjct: 852 E 852
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/93 (77%), Positives = 83/93 (89%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEK+ I++DRGVGMLTRIYNIKKACGDAKSKP+FLSDK+LES IK IV+KFPNIDIK
Sbjct: 10 QKLAEKMIILNDRGVGMLTRIYNIKKACGDAKSKPAFLSDKALESSIKTIVRKFPNIDIK 69
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ I IR++I+KSLSLYYYTFVDLL FKD V
Sbjct: 70 GLQTIMNIRNEIIKSLSLYYYTFVDLLDFKDNV 102
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/77 (71%), Positives = 64/77 (83%)
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEAC 183
+++V+EM SAAGL C VDP L TAL + K ++DEDEH+L CLLMVFVAV IPKLARN+
Sbjct: 951 MRVVSEMTSAAGLTCKVDPTLTTALRNQKAEVDEDEHLLVCLLMVFVAVSIPKLARNDNS 1010
Query: 184 FYLASLEGHSNNIHCMA 200
FY ASLEGHSNNIHCMA
Sbjct: 1011 FYRASLEGHSNNIHCMA 1027
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 40/46 (86%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L FNAAHEMVH+QSD +FPRLGQMIMDY+ P+KKLSEEF+PH +
Sbjct: 152 LGLFNAAHEMVHSQSDPSFPRLGQMIMDYDAPLKKLSEEFVPHSKL 197
>gi|307175866|gb|EFN65681.1| Membrane-associated protein Hem [Camponotus floridanus]
Length = 1122
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 125/150 (83%), Positives = 138/150 (92%)
Query: 403 EIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESR 462
EI KPG ESYRKTREELTTMDKLHMALTELC+AINYC I VW++TFAPREYLHQHLESR
Sbjct: 655 EIHKPGIESYRKTREELTTMDKLHMALTELCYAINYCPTINVWEYTFAPREYLHQHLESR 714
Query: 463 FSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQR 522
F+RALVGMVM+NPDTSEIAKPSEL SVR+YMNVLQT+ENYVHID+TRVFNNALLQQTQ
Sbjct: 715 FARALVGMVMYNPDTSEIAKPSELFVSVRSYMNVLQTIENYVHIDITRVFNNALLQQTQE 774
Query: 523 MDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
+DSHG+KT+AALY QWYS+VLLRRVS +
Sbjct: 775 LDSHGDKTIAALYTQWYSDVLLRRVSAGNI 804
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 92/121 (76%), Positives = 107/121 (88%), Gaps = 2/121 (1%)
Query: 546 RVSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWY 605
+ SE V + +N L+ T+ENYVHID+TRVFNNALLQQTQ +DSHG+KT+AALY QWY
Sbjct: 734 KPSELFVSVRSYMNVLQ--TIENYVHIDITRVFNNALLQQTQELDSHGDKTIAALYTQWY 791
Query: 606 SEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLN 665
S+VLLRRVSAGNIC+S NQRAFVSL+ EGAIPFNAEEFSD+NELRALA+LIGPYGMK+LN
Sbjct: 792 SDVLLRRVSAGNICYSTNQRAFVSLSVEGAIPFNAEEFSDINELRALAELIGPYGMKMLN 851
Query: 666 E 666
E
Sbjct: 852 E 852
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/93 (77%), Positives = 85/93 (91%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRG+GMLTRIYNIKKACGDAKSKP+FLSDK+LES IK IV+KFPNID+K
Sbjct: 10 QKLAEKLTILNDRGIGMLTRIYNIKKACGDAKSKPAFLSDKALESSIKAIVRKFPNIDVK 69
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ I+ IR++I+KSLSLYYYTFVDLL FKD V
Sbjct: 70 GLQTITNIRNEIIKSLSLYYYTFVDLLDFKDNV 102
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 63/77 (81%)
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEAC 183
+++V+EM SAAGL C VDP L TAL + K ++DEDEH+L CLLMVFVAV IPKLARN+
Sbjct: 951 MRVVSEMTSAAGLTCKVDPTLTTALRNQKAEVDEDEHLLVCLLMVFVAVSIPKLARNDNS 1010
Query: 184 FYLASLEGHSNNIHCMA 200
FY AS EGHSNNIHCMA
Sbjct: 1011 FYRASFEGHSNNIHCMA 1027
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 40/46 (86%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L FNAAHEMVH+QSD +FPRLGQMIMDY+ P+KKLSEEF+PH +
Sbjct: 152 LGLFNAAHEMVHSQSDPSFPRLGQMIMDYDAPLKKLSEEFVPHSKL 197
>gi|332017367|gb|EGI58109.1| Membrane-associated protein Hem [Acromyrmex echinatior]
Length = 1122
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 125/150 (83%), Positives = 138/150 (92%)
Query: 403 EIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESR 462
EI KPG ESYRKTREELTTMDKLHMALTELC+AINYC I VW++TFAPREYLHQHLESR
Sbjct: 655 EIHKPGIESYRKTREELTTMDKLHMALTELCYAINYCPTINVWEYTFAPREYLHQHLESR 714
Query: 463 FSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQR 522
F+RALVGMVM+NPDTSEIAKPSEL SVR+YMNVLQT+ENYVHID+TRVFNNALLQQTQ
Sbjct: 715 FARALVGMVMYNPDTSEIAKPSELFVSVRSYMNVLQTIENYVHIDITRVFNNALLQQTQE 774
Query: 523 MDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
+DSHG+KT+AALY QWYS+VLLRRVS +
Sbjct: 775 LDSHGDKTIAALYTQWYSDVLLRRVSAGNI 804
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/121 (76%), Positives = 107/121 (88%), Gaps = 2/121 (1%)
Query: 546 RVSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWY 605
+ SE V + +N L+ T+ENYVHID+TRVFNNALLQQTQ +DSHG+KT+AALY QWY
Sbjct: 734 KPSELFVSVRSYMNVLQ--TIENYVHIDITRVFNNALLQQTQELDSHGDKTIAALYTQWY 791
Query: 606 SEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLN 665
S+VLLRRVSAGNIC+S NQRAFVSL+ EGAIPFNAEEFSD+NELRALA+LIGPYGMK+LN
Sbjct: 792 SDVLLRRVSAGNICYSANQRAFVSLSVEGAIPFNAEEFSDINELRALAELIGPYGMKMLN 851
Query: 666 E 666
E
Sbjct: 852 E 852
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/93 (78%), Positives = 84/93 (90%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRG+GMLTRIYNIKKACGDAKSKP+FLSDK+LES IK IV+KFPNIDIK
Sbjct: 10 QKLAEKLTILNDRGIGMLTRIYNIKKACGDAKSKPAFLSDKALESSIKTIVRKFPNIDIK 69
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ I IR++I+KSLSLYYYTFVDLL FKD V
Sbjct: 70 GLQTIMNIRNEIIKSLSLYYYTFVDLLDFKDNV 102
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 64/77 (83%)
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEAC 183
+++V+EM SAAGL C VDP L TAL + K ++DEDEH+L CLLMVFVAV IPKL+RN+
Sbjct: 951 MRVVSEMTSAAGLTCKVDPTLTTALRNQKAEVDEDEHLLVCLLMVFVAVSIPKLSRNDNS 1010
Query: 184 FYLASLEGHSNNIHCMA 200
FY ASLEGHSNNIHCMA
Sbjct: 1011 FYRASLEGHSNNIHCMA 1027
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 40/46 (86%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L FNAAHEMVH+QSD +FPRLGQMIMDY+ P+KKLSEEF+PH +
Sbjct: 152 LGLFNAAHEMVHSQSDPSFPRLGQMIMDYDAPLKKLSEEFVPHSKL 197
>gi|383862515|ref|XP_003706729.1| PREDICTED: membrane-associated protein Hem-like [Megachile
rotundata]
Length = 1122
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 125/150 (83%), Positives = 138/150 (92%)
Query: 403 EIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESR 462
EI KPG ESYRKTREELTTMDKLHMALTELC+AINYC I VW++TFAPREYLHQHLESR
Sbjct: 655 EIHKPGIESYRKTREELTTMDKLHMALTELCYAINYCPTINVWEYTFAPREYLHQHLESR 714
Query: 463 FSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQR 522
F+RALVGMVM+NPDTSEIAKPSEL SVR+YMNVLQTVENYVHID+TRVFNNALLQQTQ
Sbjct: 715 FARALVGMVMYNPDTSEIAKPSELFVSVRSYMNVLQTVENYVHIDITRVFNNALLQQTQE 774
Query: 523 MDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
+D+HG+KT+AALY QWYS+VLLRRVS +
Sbjct: 775 LDNHGDKTIAALYTQWYSDVLLRRVSAGNI 804
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/121 (76%), Positives = 107/121 (88%), Gaps = 2/121 (1%)
Query: 546 RVSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWY 605
+ SE V + +N L+ TVENYVHID+TRVFNNALLQQTQ +D+HG+KT+AALY QWY
Sbjct: 734 KPSELFVSVRSYMNVLQ--TVENYVHIDITRVFNNALLQQTQELDNHGDKTIAALYTQWY 791
Query: 606 SEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLN 665
S+VLLRRVSAGNIC+S NQRAFVSL+ EGAIPFNAEEFSD+NELRALA+LIGPYGMK+LN
Sbjct: 792 SDVLLRRVSAGNICYSSNQRAFVSLSVEGAIPFNAEEFSDINELRALAELIGPYGMKMLN 851
Query: 666 E 666
E
Sbjct: 852 E 852
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/93 (77%), Positives = 84/93 (90%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRG+GMLTRIYNIKKACGDAKSKP FLSDKSLES IK IV+KFPNID+K
Sbjct: 10 QKLAEKLTILNDRGIGMLTRIYNIKKACGDAKSKPGFLSDKSLESSIKTIVRKFPNIDVK 69
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ I+ +R++I+KSLSLYYYTFVDLL FKD V
Sbjct: 70 GLQTITNLRNEIIKSLSLYYYTFVDLLDFKDNV 102
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/77 (72%), Positives = 64/77 (83%)
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEAC 183
+++V+EM SAAGL C VDP L AL S K+++DEDEH+L CLLMVFVAV IPKLARNE
Sbjct: 951 MRVVSEMTSAAGLTCKVDPTLTAALRSQKSEVDEDEHLLVCLLMVFVAVSIPKLARNENS 1010
Query: 184 FYLASLEGHSNNIHCMA 200
FY ASLEGHSNNIHCMA
Sbjct: 1011 FYRASLEGHSNNIHCMA 1027
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 40/46 (86%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L FNAAHEMVH+QSD +FPRLGQMIMDY+ P+KKLSEEF+PH +
Sbjct: 152 LGLFNAAHEMVHSQSDPSFPRLGQMIMDYDAPLKKLSEEFVPHSKL 197
>gi|307191997|gb|EFN75387.1| Membrane-associated protein Hem [Harpegnathos saltator]
Length = 1122
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/150 (82%), Positives = 138/150 (92%)
Query: 403 EIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESR 462
EI KPG ES+RKTREELTTMDKLHMALTELC+AINYC I VW++TFAPREYLHQHLESR
Sbjct: 655 EIHKPGIESFRKTREELTTMDKLHMALTELCYAINYCPTINVWEYTFAPREYLHQHLESR 714
Query: 463 FSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQR 522
F+RALVGMVM+NPDTSEIAKPSEL SVR+YMNVLQT+ENYVHID+TRVFNNALLQQTQ
Sbjct: 715 FARALVGMVMYNPDTSEIAKPSELFVSVRSYMNVLQTIENYVHIDITRVFNNALLQQTQE 774
Query: 523 MDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
+DSHG+KT+AALY QWYS+VLLRRVS +
Sbjct: 775 LDSHGDKTIAALYTQWYSDVLLRRVSAGNI 804
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/121 (76%), Positives = 107/121 (88%), Gaps = 2/121 (1%)
Query: 546 RVSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWY 605
+ SE V + +N L+ T+ENYVHID+TRVFNNALLQQTQ +DSHG+KT+AALY QWY
Sbjct: 734 KPSELFVSVRSYMNVLQ--TIENYVHIDITRVFNNALLQQTQELDSHGDKTIAALYTQWY 791
Query: 606 SEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLN 665
S+VLLRRVSAGNIC+S NQRAFVSL+ EGAIPFNAEEFSD+NELRALA+LIGPYGMK+LN
Sbjct: 792 SDVLLRRVSAGNICYSANQRAFVSLSVEGAIPFNAEEFSDINELRALAELIGPYGMKMLN 851
Query: 666 E 666
E
Sbjct: 852 E 852
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/93 (78%), Positives = 85/93 (91%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRG+GMLTRIYNIKKACGDAKSKP+FLSDK+LES IK IV+KFPNIDIK
Sbjct: 10 QKLAEKLTILNDRGIGMLTRIYNIKKACGDAKSKPAFLSDKALESSIKAIVRKFPNIDIK 69
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ I+ IR++I+KSLSLYYYTFVDLL FKD V
Sbjct: 70 GLQTITNIRNEIIKSLSLYYYTFVDLLDFKDNV 102
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/77 (71%), Positives = 64/77 (83%)
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEAC 183
+++V+EM SAAGL C VDP L TAL + K + +EDEH+L CLLMVFVAV IPKLARNE+
Sbjct: 951 MRVVSEMTSAAGLTCKVDPTLTTALRNQKGEPEEDEHLLVCLLMVFVAVSIPKLARNESS 1010
Query: 184 FYLASLEGHSNNIHCMA 200
FY ASLEGHSNNIHCMA
Sbjct: 1011 FYRASLEGHSNNIHCMA 1027
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 40/46 (86%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L FNAAHEMVH+QSD +FPRLGQMIMDY+ P+KKLSEEF+PH +
Sbjct: 152 LGLFNAAHEMVHSQSDPSFPRLGQMIMDYDAPLKKLSEEFVPHSKL 197
>gi|340725220|ref|XP_003400971.1| PREDICTED: membrane-associated protein Hem-like [Bombus terrestris]
Length = 1122
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 125/150 (83%), Positives = 137/150 (91%)
Query: 403 EIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESR 462
EI KPG ESYRKTREELTTMDKLHMALTELC+AINYC I VW++TFAPREYLHQHLESR
Sbjct: 655 EIHKPGIESYRKTREELTTMDKLHMALTELCYAINYCPTINVWEYTFAPREYLHQHLESR 714
Query: 463 FSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQR 522
F+RALVGMVM+N DTSEIAKPSEL SVR+YMNVLQTVENYVHID+TRVFNNALLQQTQ
Sbjct: 715 FARALVGMVMYNSDTSEIAKPSELFVSVRSYMNVLQTVENYVHIDITRVFNNALLQQTQE 774
Query: 523 MDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
+DSHG+KT+AALY QWYS+VLLRRVS +
Sbjct: 775 LDSHGDKTIAALYTQWYSDVLLRRVSAGNI 804
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 93/121 (76%), Positives = 107/121 (88%), Gaps = 2/121 (1%)
Query: 546 RVSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWY 605
+ SE V + +N L+ TVENYVHID+TRVFNNALLQQTQ +DSHG+KT+AALY QWY
Sbjct: 734 KPSELFVSVRSYMNVLQ--TVENYVHIDITRVFNNALLQQTQELDSHGDKTIAALYTQWY 791
Query: 606 SEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLN 665
S+VLLRRVSAGNIC+S NQRAFVSL+ EGAIPFNAEEFSD+NELRALA+LIGPYGMK+LN
Sbjct: 792 SDVLLRRVSAGNICYSSNQRAFVSLSVEGAIPFNAEEFSDINELRALAELIGPYGMKMLN 851
Query: 666 E 666
E
Sbjct: 852 E 852
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/93 (78%), Positives = 85/93 (91%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRG+GMLTRIYNIKKACGDAKSKP FLSDKSLES IK IV+KFPNID+K
Sbjct: 10 QKLAEKLTILNDRGIGMLTRIYNIKKACGDAKSKPGFLSDKSLESSIKTIVRKFPNIDVK 69
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
S+ I+ +R++I+KSLSLYYYTFVDLL FKD V
Sbjct: 70 SLQTITNLRNEIIKSLSLYYYTFVDLLDFKDNV 102
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/77 (72%), Positives = 63/77 (81%)
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEAC 183
+++V+EM SAAGL C VDP L AL S K+++DEDEH L CLLMVFVAV IPKLARNE
Sbjct: 951 MRVVSEMTSAAGLTCKVDPTLTAALRSQKSEVDEDEHSLVCLLMVFVAVSIPKLARNENS 1010
Query: 184 FYLASLEGHSNNIHCMA 200
FY ASLEGHSNNIHCMA
Sbjct: 1011 FYRASLEGHSNNIHCMA 1027
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 40/46 (86%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L FNAAHEMVH+QSD +FPRLGQMIMDY+ P+KKLSEEF+PH +
Sbjct: 152 LGLFNAAHEMVHSQSDPSFPRLGQMIMDYDAPLKKLSEEFVPHSKL 197
>gi|350403919|ref|XP_003486951.1| PREDICTED: membrane-associated protein Hem-like [Bombus impatiens]
Length = 1122
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 125/150 (83%), Positives = 137/150 (91%)
Query: 403 EIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESR 462
EI KPG ESYRKTREELTTMDKLHMALTELC+AINYC I VW++TFAPREYLHQHLESR
Sbjct: 655 EIHKPGIESYRKTREELTTMDKLHMALTELCYAINYCPTINVWEYTFAPREYLHQHLESR 714
Query: 463 FSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQR 522
F+RALVGMVM+N DTSEIAKPSEL SVR+YMNVLQTVENYVHID+TRVFNNALLQQTQ
Sbjct: 715 FARALVGMVMYNSDTSEIAKPSELFVSVRSYMNVLQTVENYVHIDITRVFNNALLQQTQE 774
Query: 523 MDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
+DSHG+KT+AALY QWYS+VLLRRVS +
Sbjct: 775 LDSHGDKTIAALYTQWYSDVLLRRVSAGNI 804
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 93/121 (76%), Positives = 107/121 (88%), Gaps = 2/121 (1%)
Query: 546 RVSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWY 605
+ SE V + +N L+ TVENYVHID+TRVFNNALLQQTQ +DSHG+KT+AALY QWY
Sbjct: 734 KPSELFVSVRSYMNVLQ--TVENYVHIDITRVFNNALLQQTQELDSHGDKTIAALYTQWY 791
Query: 606 SEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLN 665
S+VLLRRVSAGNIC+S NQRAFVSL+ EGAIPFNAEEFSD+NELRALA+LIGPYGMK+LN
Sbjct: 792 SDVLLRRVSAGNICYSSNQRAFVSLSVEGAIPFNAEEFSDINELRALAELIGPYGMKMLN 851
Query: 666 E 666
E
Sbjct: 852 E 852
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/93 (78%), Positives = 85/93 (91%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRG+GMLTRIYNIKKACGDAKSKP FLSDKSLES IK IV+KFPNID+K
Sbjct: 10 QKLAEKLTILNDRGIGMLTRIYNIKKACGDAKSKPGFLSDKSLESSIKTIVRKFPNIDVK 69
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
S+ I+ +R++I+KSLSLYYYTFVDLL FKD V
Sbjct: 70 SLQTITNLRNEIIKSLSLYYYTFVDLLDFKDNV 102
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/77 (72%), Positives = 64/77 (83%)
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEAC 183
+++V+EM SAAGL C VDP L AL S K+++DEDEH+L CLLMVFVAV IPKLARNE
Sbjct: 951 MRVVSEMTSAAGLTCKVDPTLTAALRSQKSEVDEDEHLLVCLLMVFVAVSIPKLARNENS 1010
Query: 184 FYLASLEGHSNNIHCMA 200
FY ASLEGHSNNIHCMA
Sbjct: 1011 FYRASLEGHSNNIHCMA 1027
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 40/46 (86%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L FNAAHEMVH+QSD +FPRLGQMIMDY+ P+KKLSEEF+PH +
Sbjct: 152 LGLFNAAHEMVHSQSDPSFPRLGQMIMDYDAPLKKLSEEFVPHSKL 197
>gi|380016202|ref|XP_003692077.1| PREDICTED: membrane-associated protein Hem-like [Apis florea]
Length = 1439
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 125/150 (83%), Positives = 137/150 (91%)
Query: 403 EIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESR 462
EI KPG ESYRKTREELTTMDKLHMALTELC+AINYC I VW++TFAPREYLHQHLESR
Sbjct: 1005 EIHKPGIESYRKTREELTTMDKLHMALTELCYAINYCPTINVWEYTFAPREYLHQHLESR 1064
Query: 463 FSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQR 522
F+RALVGMVM+N DTSEIAKPSEL SVR+YMNVLQTVENYVHID+TRVFNNALLQQTQ
Sbjct: 1065 FARALVGMVMYNSDTSEIAKPSELFVSVRSYMNVLQTVENYVHIDITRVFNNALLQQTQE 1124
Query: 523 MDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
+DSHG+KT+AALY QWYS+VLLRRVS +
Sbjct: 1125 LDSHGDKTIAALYTQWYSDVLLRRVSAGNI 1154
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/119 (78%), Positives = 106/119 (89%), Gaps = 2/119 (1%)
Query: 548 SETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
SE V + +N L+ TVENYVHID+TRVFNNALLQQTQ +DSHG+KT+AALY QWYS+
Sbjct: 1086 SELFVSVRSYMNVLQ--TVENYVHIDITRVFNNALLQQTQELDSHGDKTIAALYTQWYSD 1143
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
VLLRRVSAGNIC+S NQRAFVSL+ EGAIPFNAEEFSD+NELRALA+LIGPYGMK+LNE
Sbjct: 1144 VLLRRVSAGNICYSSNQRAFVSLSVEGAIPFNAEEFSDINELRALAELIGPYGMKMLNE 1202
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/77 (72%), Positives = 64/77 (83%)
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEAC 183
+++V+EM SAAGL C VDP L AL S K+++DEDEH+L CLLMVFVAV IPKLARNE
Sbjct: 1301 MRVVSEMTSAAGLTCKVDPTLTAALRSQKSEVDEDEHLLVCLLMVFVAVSIPKLARNENS 1360
Query: 184 FYLASLEGHSNNIHCMA 200
FY ASLEGHSNNIHCMA
Sbjct: 1361 FYRASLEGHSNNIHCMA 1377
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 40/46 (86%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L FNAAHEMVH+QSD +FPRLGQMIMDY+ P+KKLSEEF+PH +
Sbjct: 502 LGLFNAAHEMVHSQSDPSFPRLGQMIMDYDAPLKKLSEEFVPHSKL 547
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 43/51 (84%)
Query: 293 LESCIKQIVKKFPNIDIKSVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
LES IK IV+KFPNID+K + I+ +R++I+KSLSLYYYTFVDLL FKD V
Sbjct: 402 LESSIKTIVRKFPNIDVKGLQTITNLRNEIIKSLSLYYYTFVDLLDFKDNV 452
>gi|156548662|ref|XP_001602104.1| PREDICTED: membrane-associated protein Hem-like [Nasonia
vitripennis]
Length = 1123
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 126/152 (82%), Positives = 137/152 (90%)
Query: 401 LNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLE 460
L EI KPG ESYRKTREELTTMDKLHMALTELC+AINYC I VW++TFAPREYLHQHLE
Sbjct: 653 LMEIRKPGVESYRKTREELTTMDKLHMALTELCYAINYCPTINVWEYTFAPREYLHQHLE 712
Query: 461 SRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQT 520
+RF+RALVGMVMF+ DT+ IAKPSEL SVRAYMNVLQTVENYVHID+TRVFNNALLQQT
Sbjct: 713 TRFARALVGMVMFDADTNVIAKPSELFVSVRAYMNVLQTVENYVHIDITRVFNNALLQQT 772
Query: 521 QRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
Q +DSHGEKT+AALY QWYSEVLLRRVS +
Sbjct: 773 QALDSHGEKTIAALYTQWYSEVLLRRVSAGNI 804
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/102 (86%), Positives = 98/102 (96%)
Query: 565 TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSLNQ 624
TVENYVHID+TRVFNNALLQQTQ +DSHGEKT+AALY QWYSEVLLRRVSAGNIC+S NQ
Sbjct: 751 TVENYVHIDITRVFNNALLQQTQALDSHGEKTIAALYTQWYSEVLLRRVSAGNICYSPNQ 810
Query: 625 RAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
R+FVSL+ EG+IPFNAEEFSD+NELRALA+LIGPYGMK+LNE
Sbjct: 811 RSFVSLSVEGSIPFNAEEFSDINELRALAELIGPYGMKMLNE 852
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/93 (75%), Positives = 84/93 (90%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRG+GMLTRIYNIKKACGDAKSKP FLSDK+LES IK IV+KFPN+D+K
Sbjct: 10 QKLAEKLTILNDRGIGMLTRIYNIKKACGDAKSKPGFLSDKTLESSIKTIVRKFPNVDVK 69
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ I+ +R++I+KSLSLYYYTFVDLL FKD V
Sbjct: 70 GLQTITNLRNEIIKSLSLYYYTFVDLLDFKDNV 102
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDL-DEDEHVLACLLMVFVAVCIPKLARNEA 182
+++V+EM SAAGL C VDP L TAL S K +L DEDEH+L CLLMVFVAV IPKLARNE
Sbjct: 951 MRVVSEMTSAAGLSCKVDPTLTTALKSQKAELVDEDEHILVCLLMVFVAVSIPKLARNEN 1010
Query: 183 CFYLASLEGHSNNIHCMA 200
FY ASLEGHSNNIHCMA
Sbjct: 1011 SFYRASLEGHSNNIHCMA 1028
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/43 (81%), Positives = 40/43 (93%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
L FNAAHEMVH+QSD +FPRLGQMIMDY+VP+KKLSEEF+PH
Sbjct: 152 LGLFNAAHEMVHSQSDPSFPRLGQMIMDYDVPLKKLSEEFVPH 194
>gi|242024169|ref|XP_002432502.1| membrane-associated protein Hem, putative [Pediculus humanus
corporis]
gi|212517940|gb|EEB19764.1| membrane-associated protein Hem, putative [Pediculus humanus
corporis]
Length = 1120
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 124/146 (84%), Positives = 138/146 (94%)
Query: 403 EIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESR 462
EI++PG ES+RKTRE+LTTMDKLHMALTELCFAINYC +I VW++TFAPREYLHQHLE+R
Sbjct: 654 EIVRPGTESFRKTREDLTTMDKLHMALTELCFAINYCASINVWEYTFAPREYLHQHLETR 713
Query: 463 FSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQR 522
FSR+LVGMVMFN DTSEIAKPSELL SV+AYMNVLQTVENYVHID+TRVFN+ALLQQT +
Sbjct: 714 FSRSLVGMVMFNVDTSEIAKPSELLVSVQAYMNVLQTVENYVHIDITRVFNSALLQQTHQ 773
Query: 523 MDSHGEKTVAALYIQWYSEVLLRRVS 548
DSHGEKT+AALY QWYSEVLLRRVS
Sbjct: 774 NDSHGEKTIAALYTQWYSEVLLRRVS 799
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 94/121 (77%), Positives = 104/121 (85%), Gaps = 2/121 (1%)
Query: 546 RVSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWY 605
+ SE V +N L+ TVENYVHID+TRVFN+ALLQQT + DSHGEKT+AALY QWY
Sbjct: 733 KPSELLVSVQAYMNVLQ--TVENYVHIDITRVFNSALLQQTHQNDSHGEKTIAALYTQWY 790
Query: 606 SEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLN 665
SEVLLRRVSAG+ICFS NQRAFV LT EGAIPFNAEEFSD+NELRALA+LIGPYGMKLLN
Sbjct: 791 SEVLLRRVSAGSICFSRNQRAFVCLTPEGAIPFNAEEFSDINELRALAELIGPYGMKLLN 850
Query: 666 E 666
E
Sbjct: 851 E 851
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 72/93 (77%), Positives = 86/93 (92%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKL+I+HDRG+GMLTRIYNIKKACGDAKSKP+FLSDK+LES IK IV++FPNID+K
Sbjct: 10 QKLAEKLSILHDRGLGMLTRIYNIKKACGDAKSKPTFLSDKTLESSIKYIVRRFPNIDVK 69
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
++ IS I++DI+KSLSLYYYTFVDLL FKD V
Sbjct: 70 GLTVISSIQNDIIKSLSLYYYTFVDLLDFKDHV 102
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 62/75 (82%)
Query: 126 IVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEACFY 185
+VNEMASAAGL C VDP LA AL + K++ DEDEH+LACLLMVFVAV IPKLARNE Y
Sbjct: 951 VVNEMASAAGLPCKVDPTLAAALRNHKSETDEDEHLLACLLMVFVAVSIPKLARNENSIY 1010
Query: 186 LASLEGHSNNIHCMA 200
A LEGH+NNIHC+A
Sbjct: 1011 RAELEGHANNIHCIA 1025
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 39/46 (84%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L FNAAHEM+H+Q D +FPRLG+MI+DY+ P+KKLSEEF+PH +
Sbjct: 152 LGLFNAAHEMIHHQKDQSFPRLGEMIIDYDPPLKKLSEEFVPHSKL 197
>gi|91093266|ref|XP_971119.1| PREDICTED: similar to AGAP004946-PA [Tribolium castaneum]
gi|270016828|gb|EFA13274.1| Hem [Tribolium castaneum]
Length = 1122
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 124/150 (82%), Positives = 138/150 (92%)
Query: 403 EIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESR 462
EI KPG ESYRKTRE LTTMDKLHMALTELC+AINY +NI VW++TFAPREYLHQHLE+R
Sbjct: 655 EIEKPGKESYRKTRENLTTMDKLHMALTELCYAINYFSNINVWEYTFAPREYLHQHLENR 714
Query: 463 FSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQR 522
F+RALVGMVM++PDT+EIAKPSELL SVRAYMNVLQTVENYVHID+TRVFNN LLQQTQ
Sbjct: 715 FARALVGMVMYSPDTNEIAKPSELLVSVRAYMNVLQTVENYVHIDITRVFNNCLLQQTQP 774
Query: 523 MDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
+DSHGEKT+AA+Y QWYSEVLLRRVS +
Sbjct: 775 VDSHGEKTIAAIYTQWYSEVLLRRVSAGNI 804
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/121 (74%), Positives = 102/121 (84%), Gaps = 2/121 (1%)
Query: 546 RVSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWY 605
+ SE V +N L+ TVENYVHID+TRVFNN LLQQTQ +DSHGEKT+AA+Y QWY
Sbjct: 734 KPSELLVSVRAYMNVLQ--TVENYVHIDITRVFNNCLLQQTQPVDSHGEKTIAAIYTQWY 791
Query: 606 SEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLN 665
SEVLLRRVSAGNI FS+NQR+FV LTAE AIPFN EE+SDVNELRALA+LIGPYGMK L+
Sbjct: 792 SEVLLRRVSAGNIIFSMNQRSFVCLTAEAAIPFNPEEYSDVNELRALAELIGPYGMKQLS 851
Query: 666 E 666
E
Sbjct: 852 E 852
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/92 (72%), Positives = 82/92 (89%)
Query: 252 KLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS 311
K+AEKL I++DRG+GMLTRIYNIKKACGDAKSKP FLSDK+LES IK IV++FPN+D K+
Sbjct: 11 KIAEKLIILNDRGIGMLTRIYNIKKACGDAKSKPGFLSDKNLESSIKSIVRRFPNVDSKN 70
Query: 312 VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
++ I +R++I+KSLSLYYYTFVDLL FKD V
Sbjct: 71 LTAIQGLRNEIIKSLSLYYYTFVDLLDFKDHV 102
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 97 CLTDWLREIEEYASFKVLRVLVGGTSG--LKIVNEMASAAGLLCTVDPALATALASDKTD 154
CLTD L + + +L SG LK+V+EM SAAG+ C VDP L AL K +
Sbjct: 922 CLTDVLEQRIPFLLSSILDFRHHLPSGDPLKVVSEMCSAAGIPCKVDPTLVNALKLQKPE 981
Query: 155 LDEDEHVLACLLMVFVAVCIPKLARNEACFYLASLEGHSNNIHCMA 200
+D DEH++ CLLMVFVAV IPKLA+ E FY ASLEGH+NNIHCMA
Sbjct: 982 VDSDEHLITCLLMVFVAVSIPKLAKQEQSFYRASLEGHTNNIHCMA 1027
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 35/43 (81%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
L FNAA+E+VH+ D +FPRLG MIM+YE+P KKL EEF+PH
Sbjct: 152 LGLFNAAYEIVHSSPDSSFPRLGNMIMEYEIPFKKLCEEFVPH 194
>gi|321478807|gb|EFX89764.1| hypothetical protein DAPPUDRAFT_303127 [Daphnia pulex]
Length = 1120
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/168 (73%), Positives = 148/168 (88%), Gaps = 3/168 (1%)
Query: 385 AQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQV 444
AQ+ +++K++K K E+ KPG ESYRKTRE+LTTMDKLHMALTELC+AINYC I V
Sbjct: 637 AQVVNKKKREKFRKP---EVDKPGMESYRKTREDLTTMDKLHMALTELCYAINYCPTITV 693
Query: 445 WDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYV 504
WD+ FAPREYL+QHLESRF+RA+VGMVM+NP+T +IAKP+ELLASV+AYMNVLQTVENYV
Sbjct: 694 WDYAFAPREYLYQHLESRFARAVVGMVMYNPETGDIAKPTELLASVKAYMNVLQTVENYV 753
Query: 505 HIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
HID+TRVFN+ LLQQTQ +DS+GEKT+AALY+ WYSEVLLRRVS +
Sbjct: 754 HIDVTRVFNSVLLQQTQSVDSNGEKTIAALYVTWYSEVLLRRVSAGHI 801
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 87/102 (85%), Positives = 97/102 (95%)
Query: 565 TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSLNQ 624
TVENYVHID+TRVFN+ LLQQTQ +DS+GEKT+AALY+ WYSEVLLRRVSAG+ICFS Q
Sbjct: 748 TVENYVHIDVTRVFNSVLLQQTQSVDSNGEKTIAALYVTWYSEVLLRRVSAGHICFSPLQ 807
Query: 625 RAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+AFVSLTAEGA+PFNAEEFSDVNELRALA+LIGPYGMKLLNE
Sbjct: 808 QAFVSLTAEGAVPFNAEEFSDVNELRALAELIGPYGMKLLNE 849
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 80/93 (86%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKL I++DRG+GMLTRIYNIKKACGDA SKP+FLSDK+LES IK ++KKFPNID+K
Sbjct: 10 QKLAEKLLILNDRGLGMLTRIYNIKKACGDANSKPAFLSDKTLESSIKLVIKKFPNIDVK 69
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ + RS+++KSLSLYY TFVDLL FKD V
Sbjct: 70 GLQALQPHRSEVMKSLSLYYNTFVDLLDFKDKV 102
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 62/79 (78%)
Query: 122 SGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNE 181
S +VNEMASAAGL C VDP L TAL +T+ +EDEH++ACLL+VF+AV +P+LAR+E
Sbjct: 947 SDATVVNEMASAAGLSCVVDPVLVTALKVQRTETNEDEHLVACLLLVFIAVALPRLARSE 1006
Query: 182 ACFYLASLEGHSNNIHCMA 200
+ Y A LEGH+NN HC+A
Sbjct: 1007 SSMYRAYLEGHANNAHCLA 1025
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 50/72 (69%), Gaps = 7/72 (9%)
Query: 650 RALADLIGPYG--MKLLNELS-----LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
+A DL+ Y M LL+ + L +NAAHE+ HN SDV+FPRLGQMIMDY+ P+K
Sbjct: 126 KAYLDLVSTYTSLMILLSRVEDRKAVLGLYNAAHELTHNHSDVSFPRLGQMIMDYDPPLK 185
Query: 703 KLSEEFIPHDSM 714
KLSEEFIPH +
Sbjct: 186 KLSEEFIPHSKL 197
>gi|66524904|ref|XP_624331.1| PREDICTED: membrane-associated protein Hem [Apis mellifera]
Length = 1123
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 125/151 (82%), Positives = 137/151 (90%), Gaps = 1/151 (0%)
Query: 403 EIIKPGAE-SYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLES 461
EI KPG E SYRKTREELTTMDKLHMALTELC+AINYC I VW++TFAPREYLHQHLES
Sbjct: 655 EIHKPGIEKSYRKTREELTTMDKLHMALTELCYAINYCPTINVWEYTFAPREYLHQHLES 714
Query: 462 RFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQ 521
RF+RALVGMVM+N DTSEIAKPSEL SVR+YMNVLQTVENYVHID+TRVFNNALLQQTQ
Sbjct: 715 RFARALVGMVMYNSDTSEIAKPSELFVSVRSYMNVLQTVENYVHIDITRVFNNALLQQTQ 774
Query: 522 RMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
+DSHG+KT+AALY QWYS+VLLRRVS +
Sbjct: 775 ELDSHGDKTIAALYTQWYSDVLLRRVSAGNI 805
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 93/121 (76%), Positives = 107/121 (88%), Gaps = 2/121 (1%)
Query: 546 RVSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWY 605
+ SE V + +N L+ TVENYVHID+TRVFNNALLQQTQ +DSHG+KT+AALY QWY
Sbjct: 735 KPSELFVSVRSYMNVLQ--TVENYVHIDITRVFNNALLQQTQELDSHGDKTIAALYTQWY 792
Query: 606 SEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLN 665
S+VLLRRVSAGNIC+S NQRAFVSL+ EGAIPFNAEEFSD+NELRALA+LIGPYGMK+LN
Sbjct: 793 SDVLLRRVSAGNICYSSNQRAFVSLSVEGAIPFNAEEFSDINELRALAELIGPYGMKMLN 852
Query: 666 E 666
E
Sbjct: 853 E 853
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/93 (77%), Positives = 85/93 (91%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRG+GMLTRIYNIKKACGDAKSKP+FLSDKSLES IK IV+KFPNID+K
Sbjct: 10 QKLAEKLTILNDRGIGMLTRIYNIKKACGDAKSKPAFLSDKSLESSIKTIVRKFPNIDVK 69
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ I+ +R++I+KSLSLYYYTFVDLL FKD V
Sbjct: 70 GLQTITNLRNEIIKSLSLYYYTFVDLLDFKDNV 102
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/77 (72%), Positives = 64/77 (83%)
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEAC 183
+++V+EM SAAGL C VDP L AL S K+++DEDEH+L CLLMVFVAV IPKLARNE
Sbjct: 952 MRVVSEMTSAAGLTCKVDPTLTAALRSQKSEVDEDEHLLVCLLMVFVAVSIPKLARNENS 1011
Query: 184 FYLASLEGHSNNIHCMA 200
FY ASLEGHSNNIHCMA
Sbjct: 1012 FYRASLEGHSNNIHCMA 1028
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 40/46 (86%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L FNAAHEMVH+QSD +FPRLGQMIMDY+ P+KKLSEEF+PH +
Sbjct: 152 LGLFNAAHEMVHSQSDPSFPRLGQMIMDYDAPLKKLSEEFVPHSKL 197
>gi|328718030|ref|XP_003246364.1| PREDICTED: membrane-associated protein Hem-like [Acyrthosiphon
pisum]
Length = 1257
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 119/147 (80%), Positives = 134/147 (91%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
+PG+ESYRKTREELTTMDKLHMALTELC+A+NYC+ I VW++TFAPREYLHQHLE+RF R
Sbjct: 734 RPGSESYRKTREELTTMDKLHMALTELCYALNYCSTINVWEYTFAPREYLHQHLETRFGR 793
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
ALVGM MFN DT +IAKPSELLASVRAYM+VLQTVENYVHID+TRVFNNALLQQTQ DS
Sbjct: 794 ALVGMAMFNADTGDIAKPSELLASVRAYMSVLQTVENYVHIDVTRVFNNALLQQTQHADS 853
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HG+KT+A+ Y QWYSEVLLRRVS +
Sbjct: 854 HGDKTIASSYTQWYSEVLLRRVSAGNI 880
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/119 (76%), Positives = 102/119 (85%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y TVENYVHID+TRVFNNALLQQTQ DSHG+KT+A+ Y QWYSE
Sbjct: 810 KPSELLASVRAYMSVLQTVENYVHIDVTRVFNNALLQQTQHADSHGDKTIASSYTQWYSE 869
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
VLLRRVSAGNIC+S NQRAFVSLTA+GA+PFNAEEFSD+ ELRALA+L+GPYGMKLLNE
Sbjct: 870 VLLRRVSAGNICYSPNQRAFVSLTADGAVPFNAEEFSDIGELRALAELVGPYGMKLLNE 928
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/92 (77%), Positives = 84/92 (91%)
Query: 252 KLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS 311
KLAEKL++++DRGVGMLTRIYNIKKACGDAKSKP+FLSDK+LES IK IV++FPN+DIK
Sbjct: 23 KLAEKLSLINDRGVGMLTRIYNIKKACGDAKSKPAFLSDKTLESAIKYIVRRFPNVDIKG 82
Query: 312 VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ I+ IR+DI+KSLSLYYYTFVDLL FKD V
Sbjct: 83 LQAITPIRNDIIKSLSLYYYTFVDLLDFKDQV 114
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 64/81 (79%)
Query: 120 GTSGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLAR 179
T+ +V+EMASAAGL C VDPALA AL + KT + DEH+ ACLLMVFVAV +PKLAR
Sbjct: 1053 ATADTMLVSEMASAAGLECAVDPALAAALRNQKTADEHDEHLTACLLMVFVAVSVPKLAR 1112
Query: 180 NEACFYLASLEGHSNNIHCMA 200
+E FY ASLEGH+NN+HC+A
Sbjct: 1113 SEHSFYRASLEGHANNVHCVA 1133
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 52/72 (72%), Gaps = 7/72 (9%)
Query: 650 RALADLIGPYG--MKLLNELS-----LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
RA DL+ Y M LL+ + L FNAAHEMVHNQSD++FPRLGQMI+DYE P++
Sbjct: 138 RAYLDLVATYVALMVLLSRVEDRKAVLGLFNAAHEMVHNQSDLSFPRLGQMIVDYEQPVR 197
Query: 703 KLSEEFIPHDSM 714
+L++EF+PH +
Sbjct: 198 RLADEFVPHTKL 209
>gi|170032171|ref|XP_001843956.1| membrane-associated protein gex-3 [Culex quinquefasciatus]
gi|167871905|gb|EDS35288.1| membrane-associated protein gex-3 [Culex quinquefasciatus]
Length = 1107
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 125/164 (76%), Positives = 141/164 (85%), Gaps = 1/164 (0%)
Query: 401 LNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLE 460
+++I +PG ES+RKTREELTTMDKLHMALTELCFAINYC + VW++ FAPREYL QHLE
Sbjct: 637 MDDIKRPGDESFRKTREELTTMDKLHMALTELCFAINYCPTVNVWEYAFAPREYLCQHLE 696
Query: 461 SRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQT 520
+RFSRALVGMVM+NPDT EIAKPSELLASVRAYMNVLQTVENYVHID+TRVFNN LLQQT
Sbjct: 697 TRFSRALVGMVMYNPDTMEIAKPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQT 756
Query: 521 QRMDSHGEKTVAALYIQWYSEVLLRRVSETQ-VKSLNLLNFLRV 563
Q DSHGEKT+AA Y WYS+VLLR+VS V SLN F+ +
Sbjct: 757 QAQDSHGEKTIAAHYNTWYSDVLLRKVSGGNIVFSLNQKAFVSI 800
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 88/119 (73%), Positives = 97/119 (81%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y TVENYVHID+TRVFNN LLQQTQ DSHGEKT+AA Y WYS+
Sbjct: 718 KPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQTQAQDSHGEKTIAAHYNTWYSD 777
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
VLLR+VS GNI FSLNQ+AFVS+TAEG IPFN EEFSD NELRALA+LIGPYG+KLLNE
Sbjct: 778 VLLRKVSGGNIVFSLNQKAFVSITAEGCIPFNPEEFSDFNELRALAELIGPYGIKLLNE 836
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 77/86 (89%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+K++EKL I++DRG+G+LTRIYNIKKACGD KSKP FLS+K+LES IK IVK+FPNID+K
Sbjct: 141 QKISEKLIILNDRGIGILTRIYNIKKACGDTKSKPGFLSEKALESSIKFIVKRFPNIDVK 200
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDL 336
++ I+ I+S+I+KSLSLYYYTF+ L
Sbjct: 201 GLAAITNIKSEIIKSLSLYYYTFIHL 226
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 68/92 (73%)
Query: 109 ASFKVLRVLVGGTSGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMV 168
+S K + V G LK V+EMASA+GL C VDPAL+ AL + K +LDE EH++ CLLMV
Sbjct: 920 SSVKDFQEHVPGGDPLKTVSEMASASGLKCKVDPALSNALKAQKPELDEGEHLIVCLLMV 979
Query: 169 FVAVCIPKLARNEACFYLASLEGHSNNIHCMA 200
FVAV IPKLA+N+ FY ASLE H+NN HCMA
Sbjct: 980 FVAVSIPKLAKNDTSFYRASLEAHTNNTHCMA 1011
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L FNAA+EM H QSD +FPRLGQMI+DY+ P+KKL++EFIPH +
Sbjct: 262 LGLFNAAYEMQHQQSDQSFPRLGQMIIDYDAPVKKLADEFIPHQRL 307
>gi|444728498|gb|ELW68955.1| Ras-related protein Rab-30 [Tupaia chinensis]
Length = 263
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 139/262 (53%), Positives = 174/262 (66%), Gaps = 41/262 (15%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVL--V 118
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VL +
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLLQI 122
Query: 119 GGTSGLKIVNEMA-----SAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVC 173
T+G + + SA L+ T D + C
Sbjct: 123 WDTAGQERFRSITQSYYRSANALILTYDITCEESFR-----------------------C 159
Query: 174 IPKLARNEACFYLASLEGHSNN--IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLET 230
+P+ +L +E +++N I + NKID E RE+ + E+F++ DMYYLET
Sbjct: 160 LPE--------WLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLET 211
Query: 231 SAKASDNVEKLFMQIAAELMEK 252
SAK SDNVEKLF+ +A L+ +
Sbjct: 212 SAKESDNVEKLFLDLACRLISE 233
>gi|118785984|ref|XP_315044.2| AGAP004946-PA [Anopheles gambiae str. PEST]
gi|116127669|gb|EAA10373.3| AGAP004946-PA [Anopheles gambiae str. PEST]
Length = 1121
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/171 (73%), Positives = 145/171 (84%), Gaps = 2/171 (1%)
Query: 401 LNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLE 460
+++I +PG ESYRKTRE LTTMDKLHMALTELC+AINYC + VW++ FAPREYL QHLE
Sbjct: 652 MDDIRRPGDESYRKTRELLTTMDKLHMALTELCYAINYCPTVNVWEYAFAPREYLCQHLE 711
Query: 461 SRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQT 520
+RFSRALVGMVM++PDTSEIAKPSELLASVRAYMNVLQTVENYVHID+TRVFNN LLQQT
Sbjct: 712 TRFSRALVGMVMYSPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQT 771
Query: 521 QRMDSHGEKTVAALYIQWYSEVLLRRVSETQ-VKSLNLLNFLRVYTVENYV 570
Q DSHGEKT+AALY WYS+ LLR+VS V SLN F+ + + E Y+
Sbjct: 772 QPQDSHGEKTIAALYNTWYSDALLRKVSGGNIVFSLNQKAFVSI-SPEGYI 821
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/119 (72%), Positives = 96/119 (80%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y TVENYVHID+TRVFNN LLQQTQ DSHGEKT+AALY WYS+
Sbjct: 733 KPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQTQPQDSHGEKTIAALYNTWYSD 792
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS GNI FSLNQ+AFVS++ EG IPFN EEFSD NELRALA+LIGPYG+KLLNE
Sbjct: 793 ALLRKVSGGNIVFSLNQKAFVSISPEGYIPFNPEEFSDFNELRALAELIGPYGIKLLNE 851
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 70/93 (75%), Positives = 83/93 (89%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+K+AEKL I++DRGVG+LTRIYNIKKACGD KSKP FLS+KSLES IK IVK+FPNIDIK
Sbjct: 10 QKIAEKLIILNDRGVGILTRIYNIKKACGDTKSKPGFLSEKSLESSIKFIVKRFPNIDIK 69
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
++ I+ I+S+I+KSLSLYYYTFVDLL FKD V
Sbjct: 70 GLTAIASIKSEIIKSLSLYYYTFVDLLDFKDNV 102
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 67/92 (72%)
Query: 109 ASFKVLRVLVGGTSGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMV 168
+S K + V G LK V+EMASAAGL C VDPAL+ AL + K++ DE +H+ CLLMV
Sbjct: 935 SSIKDFQEHVPGGDPLKTVSEMASAAGLKCKVDPALSNALKAQKSEPDEGDHLNICLLMV 994
Query: 169 FVAVCIPKLARNEACFYLASLEGHSNNIHCMA 200
FVAV IPKLA+NE FY ASLE H+NN HCMA
Sbjct: 995 FVAVSIPKLAKNENSFYRASLEAHTNNTHCMA 1026
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 38/46 (82%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L FNAA+EM H QSD FPRLGQMI+DY++P+KKLSEEF+PH +
Sbjct: 152 LGLFNAAYEMQHTQSDQAFPRLGQMIIDYDMPIKKLSEEFVPHQRL 197
>gi|157131688|ref|XP_001655926.1| membrane-associated protein gex-3 [Aedes aegypti]
gi|108871466|gb|EAT35691.1| AAEL012159-PA [Aedes aegypti]
Length = 625
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 125/164 (76%), Positives = 140/164 (85%), Gaps = 1/164 (0%)
Query: 401 LNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLE 460
+++I +PG ESYRKTREELTTMDKLHMALTELCFAINYC + VW++ FAPREYL QHLE
Sbjct: 156 MDDIRRPGDESYRKTREELTTMDKLHMALTELCFAINYCPTVNVWEYAFAPREYLCQHLE 215
Query: 461 SRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQT 520
+RFSRALVGMVM+N DT EIAKPSELLASVRAYMNVLQTVENYVHID+TRVFNN LLQQT
Sbjct: 216 TRFSRALVGMVMYNQDTMEIAKPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQT 275
Query: 521 QRMDSHGEKTVAALYIQWYSEVLLRRVSETQ-VKSLNLLNFLRV 563
Q DSHGEKT+AA Y WYS+VLLR+VS V SLN F+ +
Sbjct: 276 QAQDSHGEKTIAAHYNTWYSDVLLRKVSGGNIVFSLNQKAFVSI 319
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/119 (73%), Positives = 96/119 (80%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y TVENYVHID+TRVFNN LLQQTQ DSHGEKT+AA Y WYS+
Sbjct: 237 KPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQTQAQDSHGEKTIAAHYNTWYSD 296
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
VLLR+VS GNI FSLNQ+AFVS+T EG IPFN EEFSD NELRALA+LIGPYG+KLLNE
Sbjct: 297 VLLRKVSGGNIVFSLNQKAFVSITPEGCIPFNPEEFSDFNELRALAELIGPYGIKLLNE 355
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 68/92 (73%)
Query: 109 ASFKVLRVLVGGTSGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMV 168
+S K + V G LK V+EMASA+GL C VDPAL+ AL + K +LDE EH++ CLLMV
Sbjct: 439 SSVKDFQEHVPGGDPLKTVSEMASASGLKCKVDPALSNALKAHKPELDEGEHLIVCLLMV 498
Query: 169 FVAVCIPKLARNEACFYLASLEGHSNNIHCMA 200
FVAV IPKLA+NE FY ASLE H+NN HCMA
Sbjct: 499 FVAVSIPKLAKNENSFYRASLEAHTNNTHCMA 530
>gi|157123821|ref|XP_001653929.1| membrane-associated protein gex-3 [Aedes aegypti]
gi|108874213|gb|EAT38438.1| AAEL009677-PA [Aedes aegypti]
Length = 1121
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 125/164 (76%), Positives = 140/164 (85%), Gaps = 1/164 (0%)
Query: 401 LNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLE 460
+++I +PG ESYRKTREELTTMDKLHMALTELCFAINYC + VW++ FAPREYL QHLE
Sbjct: 652 MDDIRRPGDESYRKTREELTTMDKLHMALTELCFAINYCPTVNVWEYAFAPREYLCQHLE 711
Query: 461 SRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQT 520
+RFSRALVGMVM+N DT EIAKPSELLASVRAYMNVLQTVENYVHID+TRVFNN LLQQT
Sbjct: 712 TRFSRALVGMVMYNQDTMEIAKPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQT 771
Query: 521 QRMDSHGEKTVAALYIQWYSEVLLRRVSETQ-VKSLNLLNFLRV 563
Q DSHGEKT+AA Y WYS+VLLR+VS V SLN F+ +
Sbjct: 772 QAQDSHGEKTIAAHYNTWYSDVLLRKVSGGNIVFSLNQKAFVSI 815
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/119 (73%), Positives = 96/119 (80%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y TVENYVHID+TRVFNN LLQQTQ DSHGEKT+AA Y WYS+
Sbjct: 733 KPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQTQAQDSHGEKTIAAHYNTWYSD 792
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
VLLR+VS GNI FSLNQ+AFVS+T EG IPFN EEFSD NELRALA+LIGPYG+KLLNE
Sbjct: 793 VLLRKVSGGNIVFSLNQKAFVSITPEGCIPFNPEEFSDFNELRALAELIGPYGIKLLNE 851
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/93 (74%), Positives = 83/93 (89%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+K++EKL I++DRGVG+LTRIYNIKKACGD KSKP FLS+KSLES IK IVK+FPNIDIK
Sbjct: 10 QKISEKLIILNDRGVGILTRIYNIKKACGDTKSKPGFLSEKSLESSIKFIVKRFPNIDIK 69
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
++ I+ I+S+I+KSLSLYYYTFVDLL FKD V
Sbjct: 70 GLAAITNIKSEIIKSLSLYYYTFVDLLDFKDNV 102
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 68/92 (73%)
Query: 109 ASFKVLRVLVGGTSGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMV 168
+S K + V G LK V+EMASA+GL C VDPAL+ AL + K +LDE EH++ CLLMV
Sbjct: 935 SSVKDFQEHVPGGDPLKTVSEMASASGLKCKVDPALSNALKAHKPELDEGEHLIVCLLMV 994
Query: 169 FVAVCIPKLARNEACFYLASLEGHSNNIHCMA 200
FVAV IPKLA+NE FY ASLE H+NN HCMA
Sbjct: 995 FVAVSIPKLAKNENSFYRASLEAHTNNTHCMA 1026
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L FNAA+EM H QSD +FPRLGQMI+DY+ P+KKL++EFIPH +
Sbjct: 152 LGLFNAAYEMQHQQSDQSFPRLGQMIIDYDAPVKKLADEFIPHQRL 197
>gi|194876184|ref|XP_001973728.1| GG13184 [Drosophila erecta]
gi|190655511|gb|EDV52754.1| GG13184 [Drosophila erecta]
Length = 1126
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 122/152 (80%), Positives = 133/152 (87%)
Query: 401 LNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLE 460
++I KPG ESYRKTRE+LTTMDKLHMALTELCFAINYC + VW+F FAPREYL Q+LE
Sbjct: 654 FDDIRKPGDESYRKTREDLTTMDKLHMALTELCFAINYCPTVNVWEFAFAPREYLCQNLE 713
Query: 461 SRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQT 520
RFSR LVGMVMFN +T EIAKPSELLASVRAYMNVLQTVENYVHID+TRVFNN LLQQT
Sbjct: 714 HRFSRDLVGMVMFNQETMEIAKPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQT 773
Query: 521 QRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
Q +DSHGEKT+AALY WYSEVLLRRVS +
Sbjct: 774 QALDSHGEKTIAALYNTWYSEVLLRRVSAGNI 805
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/119 (70%), Positives = 98/119 (82%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y TVENYVHID+TRVFNN LLQQTQ +DSHGEKT+AALY WYSE
Sbjct: 735 KPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQTQALDSHGEKTIAALYNTWYSE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
VLLRRVSAGNI FS+NQ+AFV ++ EG +PFN +EFSD+NELRALA+L+GPYG+K LNE
Sbjct: 795 VLLRRVSAGNIVFSINQKAFVPISPEGWVPFNPQEFSDLNELRALAELVGPYGIKTLNE 853
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 82/93 (88%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+K+AEKL I++DRG+G+LTRIYNIKKACGD KSKP FLS+KSLES IK IVK+FPNID+K
Sbjct: 10 QKIAEKLIILNDRGLGILTRIYNIKKACGDTKSKPGFLSEKSLESSIKFIVKRFPNIDVK 69
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
++ I I+++I+KSLSLYY+TFVDLL FKD V
Sbjct: 70 GLNAIVNIKAEIIKSLSLYYHTFVDLLDFKDNV 102
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 68/92 (73%)
Query: 109 ASFKVLRVLVGGTSGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMV 168
+S K + + G +++ +EMASAAGLLC VDP LAT L S K + DE EH+ ACLLMV
Sbjct: 937 SSVKDFQEHLPGGDQIRVASEMASAAGLLCKVDPTLATTLKSKKPEFDEGEHLTACLLMV 996
Query: 169 FVAVCIPKLARNEACFYLASLEGHSNNIHCMA 200
FVAV IPKLARNE FY A+++GHSNN HCMA
Sbjct: 997 FVAVSIPKLARNENSFYRATIDGHSNNTHCMA 1028
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 39/46 (84%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L +NAA+E+ +NQ+D FPRLGQMI+DYEVP+KKL+EEFIPH +
Sbjct: 152 LGLYNAAYELQNNQADTGFPRLGQMILDYEVPLKKLAEEFIPHQRL 197
>gi|195129553|ref|XP_002009220.1| GI13924 [Drosophila mojavensis]
gi|193920829|gb|EDW19696.1| GI13924 [Drosophila mojavensis]
Length = 1126
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 122/152 (80%), Positives = 133/152 (87%)
Query: 401 LNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLE 460
++I KPG ESYRKTRE+LTTMDKLHMALTELCFAINYC + VW+F FAPREYL Q+LE
Sbjct: 654 FDDIRKPGDESYRKTREDLTTMDKLHMALTELCFAINYCPTVNVWEFAFAPREYLCQNLE 713
Query: 461 SRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQT 520
RFSR LVGMVMFN +T EIAKPSELLASVRAYMNVLQTVENYVHID+TRVFNN LLQQT
Sbjct: 714 HRFSRDLVGMVMFNQETMEIAKPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQT 773
Query: 521 QRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
Q +DSHGEKT+AALY WYSEVLLRRVS +
Sbjct: 774 QALDSHGEKTIAALYNTWYSEVLLRRVSAGNI 805
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/119 (70%), Positives = 98/119 (82%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y TVENYVHID+TRVFNN LLQQTQ +DSHGEKT+AALY WYSE
Sbjct: 735 KPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQTQALDSHGEKTIAALYNTWYSE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
VLLRRVSAGNI FS+NQ+AFV ++ EG +PFN +EFSD+NELRALA+L+GPYG+K LNE
Sbjct: 795 VLLRRVSAGNIVFSINQKAFVPISPEGWVPFNPQEFSDLNELRALAELVGPYGIKTLNE 853
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 82/93 (88%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+K+AEKL I++DRG+G+LTRIYNIKKACGD KSKP FLS+KSLES IK IVK+FPNID+K
Sbjct: 10 QKIAEKLIILNDRGLGILTRIYNIKKACGDTKSKPGFLSEKSLESSIKFIVKRFPNIDVK 69
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
++ I I+++I+KSLSLYY+TFVDLL FKD V
Sbjct: 70 GLNAIVNIKAEIIKSLSLYYHTFVDLLDFKDNV 102
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 68/92 (73%)
Query: 109 ASFKVLRVLVGGTSGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMV 168
+S K + + G +++ +EMASAAGL+C VDP LAT L S K + DE EH+ ACLLMV
Sbjct: 937 SSVKDFQEHLPGGDQIRVASEMASAAGLICKVDPTLATTLKSKKPEFDEGEHLTACLLMV 996
Query: 169 FVAVCIPKLARNEACFYLASLEGHSNNIHCMA 200
FVAV IPKLARNE FY A+++GHSNN HCMA
Sbjct: 997 FVAVSIPKLARNEHSFYRATIDGHSNNTHCMA 1028
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L +NAA E+ +NQ+D FPRLGQMI+DYEVP+KKL+EEFIPH +
Sbjct: 152 LGLYNAAFELQNNQADTGFPRLGQMILDYEVPVKKLAEEFIPHQRL 197
>gi|194752457|ref|XP_001958538.1| GF23466 [Drosophila ananassae]
gi|190625820|gb|EDV41344.1| GF23466 [Drosophila ananassae]
Length = 1126
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 122/152 (80%), Positives = 133/152 (87%)
Query: 401 LNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLE 460
++I KPG ESYRKTRE+LTTMDKLHMALTELCFAINYC + VW+F FAPREYL Q+LE
Sbjct: 654 FDDIRKPGDESYRKTREDLTTMDKLHMALTELCFAINYCPTVNVWEFAFAPREYLCQNLE 713
Query: 461 SRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQT 520
RFSR LVGMVMFN +T EIAKPSELLASVRAYMNVLQTVENYVHID+TRVFNN LLQQT
Sbjct: 714 HRFSRDLVGMVMFNQETMEIAKPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQT 773
Query: 521 QRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
Q +DSHGEKT+AALY WYSEVLLRRVS +
Sbjct: 774 QALDSHGEKTIAALYNTWYSEVLLRRVSAGNI 805
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/119 (70%), Positives = 98/119 (82%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y TVENYVHID+TRVFNN LLQQTQ +DSHGEKT+AALY WYSE
Sbjct: 735 KPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQTQALDSHGEKTIAALYNTWYSE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
VLLRRVSAGNI FS+NQ+AFV ++ EG +PFN +EFSD+NELRALA+L+GPYG+K LNE
Sbjct: 795 VLLRRVSAGNIVFSINQKAFVPISPEGWVPFNPQEFSDLNELRALAELVGPYGIKTLNE 853
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 82/93 (88%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+K+AEKL I++DRG+G+LTRIYNIKKACGD KSKP FLS+KSLES IK IVK+FPNID+K
Sbjct: 10 QKIAEKLIILNDRGLGILTRIYNIKKACGDTKSKPGFLSEKSLESSIKFIVKRFPNIDVK 69
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
++ I I+++I+KSLSLYY+TFVDLL FKD V
Sbjct: 70 GLNAIVNIKAEIIKSLSLYYHTFVDLLDFKDNV 102
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 68/92 (73%)
Query: 109 ASFKVLRVLVGGTSGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMV 168
+S K + + G +++ +EMASAAGLLC VDP LAT L S K + DE EH+ ACLLMV
Sbjct: 937 SSVKDFQEHLPGGDQIRVASEMASAAGLLCKVDPTLATTLKSKKPEFDEGEHLTACLLMV 996
Query: 169 FVAVCIPKLARNEACFYLASLEGHSNNIHCMA 200
FVAV IPKLARNE FY A+++GHSNN HCMA
Sbjct: 997 FVAVSIPKLARNENSFYRATIDGHSNNTHCMA 1028
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 39/46 (84%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L +NAA+E+ +NQ+D FPRLGQMI+DYEVP+KKL+EEFIPH +
Sbjct: 152 LGLYNAAYELQNNQADTGFPRLGQMILDYEVPLKKLAEEFIPHQRL 197
>gi|195592352|ref|XP_002085899.1| Hem [Drosophila simulans]
gi|194197908|gb|EDX11484.1| Hem [Drosophila simulans]
Length = 1126
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 122/152 (80%), Positives = 133/152 (87%)
Query: 401 LNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLE 460
++I KPG ESYRKTRE+LTTMDKLHMALTELCFAINYC + VW+F FAPREYL Q+LE
Sbjct: 654 FDDIRKPGDESYRKTREDLTTMDKLHMALTELCFAINYCPTVNVWEFAFAPREYLCQNLE 713
Query: 461 SRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQT 520
RFSR LVGMVMFN +T EIAKPSELLASVRAYMNVLQTVENYVHID+TRVFNN LLQQT
Sbjct: 714 HRFSRDLVGMVMFNQETMEIAKPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQT 773
Query: 521 QRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
Q +DSHGEKT+AALY WYSEVLLRRVS +
Sbjct: 774 QALDSHGEKTIAALYNTWYSEVLLRRVSAGNI 805
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/119 (70%), Positives = 98/119 (82%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y TVENYVHID+TRVFNN LLQQTQ +DSHGEKT+AALY WYSE
Sbjct: 735 KPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQTQALDSHGEKTIAALYNTWYSE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
VLLRRVSAGNI FS+NQ+AFV ++ EG +PFN +EFSD+NELRALA+L+GPYG+K LNE
Sbjct: 795 VLLRRVSAGNIVFSINQKAFVPISPEGWVPFNPQEFSDLNELRALAELVGPYGIKTLNE 853
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 82/93 (88%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+K+AEKL I++DRG+G+LTRIYNIKKACGD KSKP FLS+KSLES IK IVK+FPNID+K
Sbjct: 10 QKIAEKLIILNDRGLGILTRIYNIKKACGDTKSKPGFLSEKSLESSIKFIVKRFPNIDVK 69
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
++ I I+++I+KSLSLYY+TFVDLL FKD V
Sbjct: 70 GLNAIVNIKAEIIKSLSLYYHTFVDLLDFKDNV 102
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 68/92 (73%)
Query: 109 ASFKVLRVLVGGTSGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMV 168
+S K + + G +++ +EMASAAGLLC VDP LAT L S K + DE EH+ ACLLMV
Sbjct: 937 SSVKDFQEHLPGGDQIRVASEMASAAGLLCKVDPTLATTLKSKKPEFDEGEHLTACLLMV 996
Query: 169 FVAVCIPKLARNEACFYLASLEGHSNNIHCMA 200
FVAV IPKLARNE FY A+++GHSNN HCMA
Sbjct: 997 FVAVSIPKLARNENSFYRATIDGHSNNTHCMA 1028
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 39/46 (84%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L +NAA+E+ +NQ+D FPRLGQMI+DYEVP+KKL+EEFIPH +
Sbjct: 152 LGLYNAAYELQNNQADTGFPRLGQMILDYEVPLKKLAEEFIPHQRL 197
>gi|17737737|ref|NP_524214.1| HEM-protein [Drosophila melanogaster]
gi|1708979|sp|P55162.1|HEM_DROME RecName: Full=Membrane-associated protein Hem; AltName: Full=dHem-2
gi|510583|emb|CAA56332.1| dhem2 [Drosophila melanogaster]
gi|7296536|gb|AAF51820.1| HEM-protein [Drosophila melanogaster]
gi|21428576|gb|AAM49948.1| LD43495p [Drosophila melanogaster]
Length = 1126
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 122/152 (80%), Positives = 133/152 (87%)
Query: 401 LNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLE 460
++I KPG ESYRKTRE+LTTMDKLHMALTELCFAINYC + VW+F FAPREYL Q+LE
Sbjct: 654 FDDIRKPGDESYRKTREDLTTMDKLHMALTELCFAINYCPTVNVWEFAFAPREYLCQNLE 713
Query: 461 SRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQT 520
RFSR LVGMVMFN +T EIAKPSELLASVRAYMNVLQTVENYVHID+TRVFNN LLQQT
Sbjct: 714 HRFSRDLVGMVMFNQETMEIAKPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQT 773
Query: 521 QRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
Q +DSHGEKT+AALY WYSEVLLRRVS +
Sbjct: 774 QALDSHGEKTIAALYNTWYSEVLLRRVSAGNI 805
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 82/93 (88%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+K+AEKL I++DRG+G+LTRIYNIKKACGD KSKP FLS+KSLES IK IVK+FPNID+K
Sbjct: 10 QKIAEKLIILNDRGLGILTRIYNIKKACGDTKSKPGFLSEKSLESSIKFIVKRFPNIDVK 69
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
++ I I+++I+KSLSLYY+TFVDLL FKD V
Sbjct: 70 GLNAIVNIKAEIIKSLSLYYHTFVDLLDFKDNV 102
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 68/92 (73%)
Query: 109 ASFKVLRVLVGGTSGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMV 168
+S K + + G +++ +EMASAAGLLC VDP LAT L S K + DE EH+ ACLLMV
Sbjct: 937 SSVKDFQEHLPGGDQIRVASEMASAAGLLCKVDPTLATTLKSKKPEFDEGEHLTACLLMV 996
Query: 169 FVAVCIPKLARNEACFYLASLEGHSNNIHCMA 200
FVAV IPKLARNE FY A+++GHSNN HCMA
Sbjct: 997 FVAVSIPKLARNENSFYRATIDGHSNNTHCMA 1028
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 39/46 (84%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L +NAA+E+ +NQ+D FPRLGQMI+DYEVP+KKL+EEFIPH +
Sbjct: 152 LGLYNAAYELQNNQADTGFPRLGQMILDYEVPLKKLAEEFIPHQRL 197
>gi|195348745|ref|XP_002040908.1| GM22095 [Drosophila sechellia]
gi|194122418|gb|EDW44461.1| GM22095 [Drosophila sechellia]
Length = 1126
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 122/152 (80%), Positives = 133/152 (87%)
Query: 401 LNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLE 460
++I KPG ESYRKTRE+LTTMDKLHMALTELCFAINYC + VW+F FAPREYL Q+LE
Sbjct: 654 FDDIRKPGDESYRKTREDLTTMDKLHMALTELCFAINYCPTVNVWEFAFAPREYLCQNLE 713
Query: 461 SRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQT 520
RFSR LVGMVMFN +T EIAKPSELLASVRAYMNVLQTVENYVHID+TRVFNN LLQQT
Sbjct: 714 HRFSRDLVGMVMFNQETMEIAKPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQT 773
Query: 521 QRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
Q +DSHGEKT+AALY WYSEVLLRRVS +
Sbjct: 774 QALDSHGEKTIAALYNTWYSEVLLRRVSAGNI 805
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/119 (70%), Positives = 98/119 (82%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y TVENYVHID+TRVFNN LLQQTQ +DSHGEKT+AALY WYSE
Sbjct: 735 KPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQTQALDSHGEKTIAALYNTWYSE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
VLLRRVSAGNI FS+NQ+AFV ++ EG +PFN +EFSD+NELRALA+L+GPYG+K LNE
Sbjct: 795 VLLRRVSAGNIVFSINQKAFVPISPEGWVPFNPQEFSDLNELRALAELVGPYGIKTLNE 853
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 82/93 (88%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+K+AEKL I++DRG+G+LTRIYNIKKACGD KSKP FLS+KSLES IK IVK+FPNID+K
Sbjct: 10 QKIAEKLIILNDRGLGILTRIYNIKKACGDTKSKPGFLSEKSLESSIKFIVKRFPNIDVK 69
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
++ I I+++I+KSLSLYY+TFVDLL FKD V
Sbjct: 70 GLNAIVNIKAEIIKSLSLYYHTFVDLLDFKDNV 102
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 68/92 (73%)
Query: 109 ASFKVLRVLVGGTSGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMV 168
+S K + + G +++ +EMASAAGLLC VDP LAT L S K + DE EH+ ACLLMV
Sbjct: 937 SSVKDFQEHLPGGDQIRVASEMASAAGLLCKVDPTLATTLKSKKPEFDEGEHLTACLLMV 996
Query: 169 FVAVCIPKLARNEACFYLASLEGHSNNIHCMA 200
FVAV IPKLARNE FY A+++GHSNN HCMA
Sbjct: 997 FVAVSIPKLARNENSFYRATIDGHSNNTHCMA 1028
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 39/46 (84%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L +NAA+E+ +NQ+D FPRLGQMI+DYEVP+KKL+EEFIPH +
Sbjct: 152 LGLYNAAYELQNNQADTGFPRLGQMILDYEVPLKKLAEEFIPHQRL 197
>gi|241620391|ref|XP_002408664.1| membrane-associated protein Hem, putative [Ixodes scapularis]
gi|215503023|gb|EEC12517.1| membrane-associated protein Hem, putative [Ixodes scapularis]
Length = 1127
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/283 (49%), Positives = 174/283 (61%), Gaps = 66/283 (23%)
Query: 385 AQIASRRKKDKNNKKILNEII-KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQ 443
A + ++K+DK + KPG ESYR+TREEL+TMDKLHMALTELCFAINY ++I
Sbjct: 646 ALVVHKKKRDKKQRPATAPPRDKPGTESYRRTREELSTMDKLHMALTELCFAINYASSIH 705
Query: 444 VWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENY 503
VW+ TFAPREYL QHLE+RF++ALVGMVM+N ++ EIAKPSELL+SV+AYM+VLQ +EN+
Sbjct: 706 VWEHTFAPREYLAQHLENRFNKALVGMVMYNAESHEIAKPSELLSSVQAYMSVLQGIENH 765
Query: 504 VHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQVKSLNLLNFLRV 563
VH+D+TRVFNN LLQQTQ DSHG+KT+A LY WY EVLLR+V
Sbjct: 766 VHVDITRVFNNVLLQQTQPQDSHGDKTIATLYTNWYLEVLLRKV---------------- 809
Query: 564 YTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSLN 623
T + + + R F N L+ Q+
Sbjct: 810 -TAGHMCYSPLQRAFVN-LIHDGQQ----------------------------------- 832
Query: 624 QRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
V TAE EFSDV ELR+LA+LIGPYGMK LNE
Sbjct: 833 ----VPFTAE--------EFSDVQELRSLAELIGPYGMKFLNE 863
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/97 (72%), Positives = 84/97 (86%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+++AEKLTI++DRGVGMLTRIYNIKKACGDAKSKPSFLSDK+LES IK +V++FPNIDI+
Sbjct: 10 QRIAEKLTILNDRGVGMLTRIYNIKKACGDAKSKPSFLSDKNLESAIKHVVRRFPNIDIR 69
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+S + IR DI+KSLSLYYYTFVDLL F+D V
Sbjct: 70 GNSAQLSAVFTIRQDIMKSLSLYYYTFVDLLDFRDHV 106
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 61/74 (82%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEACFYL 186
V+EMASAAGL C VDPAL TAL S K+D+ EDE+ +ACLLMVFVAV +PKLAR+E Y
Sbjct: 964 VSEMASAAGLPCKVDPALVTALKSQKSDVGEDEYQVACLLMVFVAVSLPKLARSEGSVYR 1023
Query: 187 ASLEGHSNNIHCMA 200
ASLE HSNN+HC+A
Sbjct: 1024 ASLEAHSNNMHCLA 1037
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 35/43 (81%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
L FN AHEM H SD +FPRLGQ+I++Y+ P+KKL++EF+PH
Sbjct: 156 LGLFNTAHEMTHGHSDNSFPRLGQLIVEYDPPLKKLADEFVPH 198
>gi|17016284|gb|AAL31735.1| hem protein [Drosophila simulans]
gi|17016286|gb|AAL31736.1| hem protein [Drosophila simulans]
gi|17016288|gb|AAL31737.1| hem protein [Drosophila simulans]
gi|17016292|gb|AAL31739.1| hem protein [Drosophila simulans]
gi|17016294|gb|AAL31740.1| hem protein [Drosophila simulans]
gi|17016296|gb|AAL31741.1| hem protein [Drosophila simulans]
gi|17016298|gb|AAL31742.1| hem protein [Drosophila simulans]
Length = 362
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 121/143 (84%), Positives = 129/143 (90%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ESYRKTRE+LTTMDKLHMALTELCFAINYC + VW+F FAPREYL Q+LE RFSR
Sbjct: 2 KPGDESYRKTREDLTTMDKLHMALTELCFAINYCPTVNVWEFAFAPREYLCQNLEHRFSR 61
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
LVGMVMFN +T EIAKPSELLASVRAYMNVLQTVENYVHID+TRVFNN LLQQTQ +DS
Sbjct: 62 DLVGMVMFNQETMEIAKPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQTQALDS 121
Query: 526 HGEKTVAALYIQWYSEVLLRRVS 548
HGEKT+AALY WYSEVLLRRVS
Sbjct: 122 HGEKTIAALYNTWYSEVLLRRVS 144
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/119 (70%), Positives = 98/119 (82%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y TVENYVHID+TRVFNN LLQQTQ +DSHGEKT+AALY WYSE
Sbjct: 78 KPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQTQALDSHGEKTIAALYNTWYSE 137
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
VLLRRVSAGNI FS+NQ+AFV ++ EG +PFN +EFSD+NELRALA+L+GPYG+K LNE
Sbjct: 138 VLLRRVSAGNIVFSINQKAFVPISPEGWVPFNPQEFSDLNELRALAELVGPYGIKTLNE 196
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 59/83 (71%)
Query: 109 ASFKVLRVLVGGTSGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMV 168
+S K + + G +++ +EMASAAGLLC VDP LAT L S K + E EH+ ACLLMV
Sbjct: 280 SSVKDFQEHLPGGDQIRVASEMASAAGLLCKVDPTLATTLKSKKPEFAEGEHLTACLLMV 339
Query: 169 FVAVCIPKLARNEACFYLASLEG 191
FVAV IPKLARNE FY A+++G
Sbjct: 340 FVAVSIPKLARNENSFYRATIDG 362
>gi|195427173|ref|XP_002061653.1| GK17072 [Drosophila willistoni]
gi|194157738|gb|EDW72639.1| GK17072 [Drosophila willistoni]
Length = 1126
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 121/152 (79%), Positives = 133/152 (87%)
Query: 401 LNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLE 460
++I KPG ESYRKTRE+LTTMDKLHMALTELC+AINYC + VW+F FAPREYL Q+LE
Sbjct: 654 FDDIRKPGDESYRKTREDLTTMDKLHMALTELCYAINYCPTVNVWEFAFAPREYLCQNLE 713
Query: 461 SRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQT 520
RFSR LVGMVMFN +T EIAKPSELLASVRAYMNVLQTVENYVHID+TRVFNN LLQQT
Sbjct: 714 HRFSRDLVGMVMFNQETMEIAKPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQT 773
Query: 521 QRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
Q +DSHGEKT+AALY WYSEVLLRRVS +
Sbjct: 774 QALDSHGEKTIAALYNTWYSEVLLRRVSAGNI 805
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/119 (70%), Positives = 98/119 (82%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y TVENYVHID+TRVFNN LLQQTQ +DSHGEKT+AALY WYSE
Sbjct: 735 KPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQTQALDSHGEKTIAALYNTWYSE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
VLLRRVSAGNI FS+NQ+AFV ++ EG +PFN +EFSD+NELRALA+L+GPYG+K LNE
Sbjct: 795 VLLRRVSAGNIVFSINQKAFVPISPEGWVPFNPQEFSDLNELRALAELVGPYGIKTLNE 853
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 82/93 (88%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+K+AEKL I++DRG+G+LTRIYNIKKACGD KSKP FLS+KSLES IK IVK+FPNID+K
Sbjct: 10 QKIAEKLIILNDRGLGILTRIYNIKKACGDTKSKPGFLSEKSLESSIKFIVKRFPNIDVK 69
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
++ I I+++I+KSLSLYY+TFVDLL FKD V
Sbjct: 70 GLNAIVNIKAEIIKSLSLYYHTFVDLLDFKDNV 102
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 68/92 (73%)
Query: 109 ASFKVLRVLVGGTSGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMV 168
+S K + + G +++ +EMASAAGLLC VDP LAT L S K + DE EH+ ACLLMV
Sbjct: 937 SSVKDFQEHLPGGDQIRVASEMASAAGLLCKVDPTLATTLKSKKPEFDEGEHLTACLLMV 996
Query: 169 FVAVCIPKLARNEACFYLASLEGHSNNIHCMA 200
FVAV IPKLARNE FY A+++GHSNN HCMA
Sbjct: 997 FVAVSIPKLARNENSFYRATIDGHSNNTHCMA 1028
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 39/46 (84%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L +NAA+E+ HNQ+D FPRLGQMI+DYEVP+KKL+EEFIPH +
Sbjct: 152 LGLYNAAYELQHNQADTGFPRLGQMILDYEVPLKKLAEEFIPHQRL 197
>gi|125977434|ref|XP_001352750.1| GA19168 [Drosophila pseudoobscura pseudoobscura]
gi|195169601|ref|XP_002025609.1| GL20745 [Drosophila persimilis]
gi|54641500|gb|EAL30250.1| GA19168 [Drosophila pseudoobscura pseudoobscura]
gi|194109102|gb|EDW31145.1| GL20745 [Drosophila persimilis]
Length = 1124
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 121/152 (79%), Positives = 133/152 (87%)
Query: 401 LNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLE 460
++I KPG ESYRKTRE+LTTMDKLHMALTELC+AINYC + VW+F FAPREYL Q+LE
Sbjct: 654 FDDIRKPGDESYRKTREDLTTMDKLHMALTELCYAINYCPTVNVWEFAFAPREYLCQNLE 713
Query: 461 SRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQT 520
RFSR LVGMVMFN +T EIAKPSELLASVRAYMNVLQTVENYVHID+TRVFNN LLQQT
Sbjct: 714 HRFSRDLVGMVMFNQETMEIAKPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQT 773
Query: 521 QRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
Q +DSHGEKT+AALY WYSEVLLRRVS +
Sbjct: 774 QALDSHGEKTIAALYNTWYSEVLLRRVSAGNI 805
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/119 (70%), Positives = 98/119 (82%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y TVENYVHID+TRVFNN LLQQTQ +DSHGEKT+AALY WYSE
Sbjct: 735 KPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQTQALDSHGEKTIAALYNTWYSE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
VLLRRVSAGNI FS+NQ+AFV ++ EG +PFN +EFSD+NELRALA+L+GPYG+K LNE
Sbjct: 795 VLLRRVSAGNIVFSINQKAFVPISPEGWVPFNPQEFSDLNELRALAELVGPYGIKTLNE 853
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 82/93 (88%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+K+AEKL I++DRG+G+LTRIYNIKKACGD KSKP FLS+KSLES IK IVK+FPNID+K
Sbjct: 10 QKIAEKLIILNDRGLGILTRIYNIKKACGDTKSKPGFLSEKSLESSIKFIVKRFPNIDVK 69
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
++ I I+++I+KSLSLYY+TFVDLL FKD V
Sbjct: 70 GLNAIVNIKAEIIKSLSLYYHTFVDLLDFKDNV 102
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 68/92 (73%)
Query: 109 ASFKVLRVLVGGTSGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMV 168
+S K + + G +++ +EMASAAGLLC VDP LAT L S K + DE EH+ ACLLMV
Sbjct: 937 SSVKDFQEHLPGGDQIRVASEMASAAGLLCKVDPTLATTLKSKKPEFDEGEHLTACLLMV 996
Query: 169 FVAVCIPKLARNEACFYLASLEGHSNNIHCMA 200
FVAV IPKLARNE FY A+++GHSNN HCMA
Sbjct: 997 FVAVSIPKLARNENSFYRATIDGHSNNTHCMA 1028
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 38/46 (82%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L +NAA E+ +NQ+D FPRLGQMI+DYEVP+KKLSEEFIPH +
Sbjct: 152 LGLYNAAFELQNNQADTGFPRLGQMILDYEVPLKKLSEEFIPHQRL 197
>gi|17016290|gb|AAL31738.1| hem protein [Drosophila simulans]
Length = 362
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 121/143 (84%), Positives = 129/143 (90%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ESYRKTRE+LTTMDKLHMALTELCFAINYC + VW+F FAPREYL Q+LE RFSR
Sbjct: 2 KPGDESYRKTREDLTTMDKLHMALTELCFAINYCPTVNVWEFAFAPREYLCQNLEHRFSR 61
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
LVGMVMFN +T EIAKPSELLASVRAYMNVLQTVENYVHID+TRVFNN LLQQTQ +DS
Sbjct: 62 DLVGMVMFNQETMEIAKPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQTQALDS 121
Query: 526 HGEKTVAALYIQWYSEVLLRRVS 548
HGEKT+AALY WYSEVLLRRVS
Sbjct: 122 HGEKTIAALYNTWYSEVLLRRVS 144
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/119 (70%), Positives = 98/119 (82%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y TVENYVHID+TRVFNN LLQQTQ +DSHGEKT+AALY WYSE
Sbjct: 78 KPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQTQALDSHGEKTIAALYNTWYSE 137
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
VLLRRVSAGNI FS+NQ+AFV ++ EG +PFN +EFSD+NELRALA+L+GPYG+K LNE
Sbjct: 138 VLLRRVSAGNIVFSINQKAFVPISPEGWVPFNPQEFSDLNELRALAELVGPYGIKTLNE 196
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 59/83 (71%)
Query: 109 ASFKVLRVLVGGTSGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMV 168
+S K + + G +++ +EMASAAGLLC VDP LAT L S K + E EH+ ACLLMV
Sbjct: 280 SSVKDFQEHLPGGDQIRVASEMASAAGLLCKVDPTLATTLKSKKPEFAEGEHLTACLLMV 339
Query: 169 FVAVCIPKLARNEACFYLASLEG 191
FVAV IPKLARNE FY A+++G
Sbjct: 340 FVAVSIPKLARNENSFYRATIDG 362
>gi|195378366|ref|XP_002047955.1| GJ13713 [Drosophila virilis]
gi|194155113|gb|EDW70297.1| GJ13713 [Drosophila virilis]
Length = 1126
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 121/152 (79%), Positives = 133/152 (87%)
Query: 401 LNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLE 460
++I KPG ESYRKTRE+LTTMDKLHMALTELC+AINYC + VW+F FAPREYL Q+LE
Sbjct: 654 FDDIRKPGDESYRKTREDLTTMDKLHMALTELCYAINYCPTVNVWEFAFAPREYLCQNLE 713
Query: 461 SRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQT 520
RFSR LVGMVMFN +T EIAKPSELLASVRAYMNVLQTVENYVHID+TRVFNN LLQQT
Sbjct: 714 HRFSRDLVGMVMFNQETMEIAKPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQT 773
Query: 521 QRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
Q +DSHGEKT+AALY WYSEVLLRRVS +
Sbjct: 774 QALDSHGEKTIAALYNTWYSEVLLRRVSAGNI 805
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/119 (70%), Positives = 98/119 (82%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y TVENYVHID+TRVFNN LLQQTQ +DSHGEKT+AALY WYSE
Sbjct: 735 KPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQTQALDSHGEKTIAALYNTWYSE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
VLLRRVSAGNI FS+NQ+AFV ++ EG +PFN +EFSD+NELRALA+L+GPYG+K LNE
Sbjct: 795 VLLRRVSAGNIVFSINQKAFVPISPEGWVPFNPQEFSDLNELRALAELVGPYGIKTLNE 853
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/93 (72%), Positives = 82/93 (88%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+K+AEKL I++DRG+G+LTRIYNIKKACGD KSKP FLS+KSLES IK IVK+FPNID+K
Sbjct: 10 QKIAEKLIILNDRGLGILTRIYNIKKACGDTKSKPGFLSEKSLESSIKFIVKRFPNIDVK 69
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+S I I+++I+KSLSLYY+TFVDLL FKD V
Sbjct: 70 GLSAIVNIKAEIIKSLSLYYHTFVDLLEFKDNV 102
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 68/92 (73%)
Query: 109 ASFKVLRVLVGGTSGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMV 168
+S K + + G +++ +EMASAAGLLC VDP LAT L S K + DE EH+ ACLLMV
Sbjct: 937 SSVKDFQEHLPGGDQIRVASEMASAAGLLCKVDPTLATTLKSKKPEFDEGEHLTACLLMV 996
Query: 169 FVAVCIPKLARNEACFYLASLEGHSNNIHCMA 200
FVAV IPKLARNE FY A+++GHSNN HCMA
Sbjct: 997 FVAVSIPKLARNEHSFYRATIDGHSNNTHCMA 1028
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 39/46 (84%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L +NAA+E+ +NQ+D FPRLGQMI+DYEVP+KKL+EEFIPH +
Sbjct: 152 LGLYNAAYELQNNQADTGFPRLGQMILDYEVPLKKLAEEFIPHQRL 197
>gi|195018675|ref|XP_001984826.1| GH14818 [Drosophila grimshawi]
gi|193898308|gb|EDV97174.1| GH14818 [Drosophila grimshawi]
Length = 1126
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 120/152 (78%), Positives = 133/152 (87%)
Query: 401 LNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLE 460
++I KPG ES+RKTRE+LTTMDKLHMALTELC+AINYC + VW+F FAPREYL Q+LE
Sbjct: 654 FDDIRKPGDESFRKTREDLTTMDKLHMALTELCYAINYCPTVNVWEFAFAPREYLCQNLE 713
Query: 461 SRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQT 520
RFSR LVGMVMFN +T EIAKPSELLASVRAYMNVLQTVENYVHID+TRVFNN LLQQT
Sbjct: 714 HRFSRDLVGMVMFNQETMEIAKPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQT 773
Query: 521 QRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
Q +DSHGEKT+AALY WYSEVLLRRVS +
Sbjct: 774 QSLDSHGEKTIAALYNTWYSEVLLRRVSAGNI 805
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/119 (69%), Positives = 97/119 (81%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y TVENYVHID+TRVFNN LLQQTQ +DSHGEKT+AALY WYSE
Sbjct: 735 KPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQTQSLDSHGEKTIAALYNTWYSE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
VLLRRVSAGNI FS+NQ+AFV ++ EG +PFN +EFSD+ ELRALA+L+GPYG+K LNE
Sbjct: 795 VLLRRVSAGNIVFSINQKAFVPISPEGWVPFNPQEFSDLIELRALAELVGPYGIKTLNE 853
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 82/93 (88%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+K+AEKL I++DRG+G+LTRIYNIKKACGD KSKP FLS+KSLES IK IVK+FPNID+K
Sbjct: 10 QKIAEKLIILNDRGLGILTRIYNIKKACGDTKSKPGFLSEKSLESSIKFIVKRFPNIDVK 69
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
++ I I+++I+KSLSLYY+TFVDLL FKD V
Sbjct: 70 GLNAIVNIKAEIIKSLSLYYHTFVDLLDFKDNV 102
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 68/92 (73%)
Query: 109 ASFKVLRVLVGGTSGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMV 168
+S K + + G +++ +EMASAAGLLC VDP LAT L S K + DE EH+ ACLLMV
Sbjct: 937 SSVKDFQEHLPGGDQIRVASEMASAAGLLCKVDPTLATTLKSKKPEYDEGEHLTACLLMV 996
Query: 169 FVAVCIPKLARNEACFYLASLEGHSNNIHCMA 200
FVAV IPKLARNE FY A+++GHSNN HCMA
Sbjct: 997 FVAVSIPKLARNEHSFYRATIDGHSNNTHCMA 1028
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L +NAA E+ +NQ+D FPRLGQMI+DYEVP+KKL+EEFIPH +
Sbjct: 152 LGLYNAAFELQNNQADTGFPRLGQMILDYEVPLKKLAEEFIPHQRL 197
>gi|17016282|gb|AAL31734.1| hem protein [Drosophila yakuba]
Length = 362
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/143 (83%), Positives = 128/143 (89%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ESYRKTRE+LTTMDKLHMALTELCFAINYC + VW+F FAPREYL Q+LE RFSR
Sbjct: 2 KPGDESYRKTREDLTTMDKLHMALTELCFAINYCPTVNVWEFAFAPREYLCQNLEHRFSR 61
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
LVGMVMFN +T EIAKPSELLASVRAYMNVLQTVENYVHID+TRVFNN LLQQTQ +DS
Sbjct: 62 DLVGMVMFNQETMEIAKPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQTQALDS 121
Query: 526 HGEKTVAALYIQWYSEVLLRRVS 548
HGEKT+AALY WYSEVLL RVS
Sbjct: 122 HGEKTIAALYNTWYSEVLLXRVS 144
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/119 (69%), Positives = 97/119 (81%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y TVENYVHID+TRVFNN LLQQTQ +DSHGEKT+AALY WYSE
Sbjct: 78 KPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQTQALDSHGEKTIAALYNTWYSE 137
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
VLL RVSAGNI FS+NQ+AFV ++ EG +PFN +EFSD+NELRALA+L+GPYG+K LNE
Sbjct: 138 VLLXRVSAGNIVFSINQKAFVPISPEGWVPFNPQEFSDLNELRALAELVGPYGIKTLNE 196
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 60/83 (72%)
Query: 109 ASFKVLRVLVGGTSGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMV 168
+S K + + G +++ +EMASAAGLLC VDP LAT L S K + DE EH+ ACLLMV
Sbjct: 280 SSVKDFQEHLPGGDQIRVASEMASAAGLLCKVDPTLATTLKSKKPEFDEGEHLTACLLMV 339
Query: 169 FVAVCIPKLARNEACFYLASLEG 191
FVAV IPKLARNE FY A+++G
Sbjct: 340 FVAVSIPKLARNENSFYRATIDG 362
>gi|312370954|gb|EFR19247.1| hypothetical protein AND_22820 [Anopheles darlingi]
Length = 1782
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/142 (81%), Positives = 128/142 (90%)
Query: 401 LNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLE 460
L++I +PG ESYRKTRE LTTMDKLHMALTELCFAINYC + VW++ FAPREYL QHLE
Sbjct: 652 LDDIRRPGDESYRKTRELLTTMDKLHMALTELCFAINYCPTVNVWEYAFAPREYLCQHLE 711
Query: 461 SRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQT 520
+RFSRALVGMVM++ DTSEIAKPSELLASVRAYMNVLQTVENYVHID+TRVFNN LLQQT
Sbjct: 712 TRFSRALVGMVMYSADTSEIAKPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQT 771
Query: 521 QRMDSHGEKTVAALYIQWYSEV 542
Q DSHGEKT+AALY WYS+V
Sbjct: 772 QPQDSHGEKTIAALYNTWYSDV 793
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/93 (74%), Positives = 83/93 (89%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+K+AEKL I++DRGVG+LTRIYNIKKACGD KSKP FLS+KSLES IK IVK+FPNIDIK
Sbjct: 10 QKIAEKLIILNDRGVGILTRIYNIKKACGDTKSKPGFLSEKSLESSIKFIVKRFPNIDIK 69
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
++ I+ I+++I+KSLSLYYYTFVDLL FKD V
Sbjct: 70 GLTAIASIKTEIIKSLSLYYYTFVDLLDFKDNV 102
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/119 (61%), Positives = 82/119 (68%), Gaps = 18/119 (15%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y TVENYVHID+TRVFNN LLQQTQ DSHGEKT+AALY WYS+
Sbjct: 733 KPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQTQPQDSHGEKTIAALYNTWYSD 792
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
V + FVS+T EG IPFN EEFSD NELRALA+LIGPYG++LLNE
Sbjct: 793 VAV-------------AETFVSITPEGYIPFNPEEFSDFNELRALAELIGPYGIRLLNE 838
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%)
Query: 118 VGGTSGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKL 177
V G LK V+EMASAAGL C VDPAL++AL + K + DE +H+ CLLMVFVAV IPKL
Sbjct: 931 VPGGDPLKTVSEMASAAGLKCRVDPALSSALKAQKPEPDESDHLNICLLMVFVAVSIPKL 990
Query: 178 ARNEACFYLASLEGHSNNIHCMA 200
A+NE FY ASL+ H+NN HCMA
Sbjct: 991 AKNENSFYRASLDAHTNNTHCMA 1013
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 39/46 (84%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L FNAA+EM +NQSD FPRLGQMI+DY+VP+KKL++EFIPH +
Sbjct: 152 LGLFNAAYEMQNNQSDQAFPRLGQMIIDYDVPVKKLADEFIPHQRL 197
>gi|322796096|gb|EFZ18672.1| hypothetical protein SINV_00440 [Solenopsis invicta]
Length = 205
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 111/119 (93%), Positives = 116/119 (97%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFKVVLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVE+ NE++KLQI
Sbjct: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVENEKVKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL DWLREIEEYAS KVLR+LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEEYASNKVLRILVG 119
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 67/96 (69%), Gaps = 8/96 (8%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDFA 220
L++V+ C P C +L +E +++N + + NKIDREDREIPT VGEDFA
Sbjct: 83 LILVYDISCQPTFD----CLPDWLREIEEYASNKVLRILVGNKIDREDREIPTHVGEDFA 138
Query: 221 KRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
+RH MY+LETSAK ++NVE+LFM+IAAELME+ K
Sbjct: 139 QRHGMYFLETSAKEAENVERLFMEIAAELMEQARSK 174
>gi|340710437|ref|XP_003393796.1| PREDICTED: ras-related protein Rab-30-like [Bombus terrestris]
gi|350427307|ref|XP_003494717.1| PREDICTED: ras-related protein Rab-30-like [Bombus impatiens]
Length = 205
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 111/119 (93%), Positives = 116/119 (97%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFKVVLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVE+ NE++KLQI
Sbjct: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVENEKVKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL DWLREIEEYAS KVLR+LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEEYASNKVLRILVG 119
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 67/96 (69%), Gaps = 8/96 (8%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDFA 220
L++V+ C P C +L +E +++N + + NKIDREDREIPT VGEDFA
Sbjct: 83 LILVYDISCQPTFD----CLPDWLREIEEYASNKVLRILVGNKIDREDREIPTHVGEDFA 138
Query: 221 KRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
+RH MY+LETSAK ++NVE+LFM+IAAELME+ K
Sbjct: 139 QRHGMYFLETSAKEAENVERLFMEIAAELMEQARSK 174
>gi|66504348|ref|XP_395496.2| PREDICTED: ras-related protein Rab-30-like isoform 1 [Apis
mellifera]
gi|380026166|ref|XP_003696829.1| PREDICTED: ras-related protein Rab-30-like [Apis florea]
gi|383851999|ref|XP_003701518.1| PREDICTED: ras-related protein Rab-30-like [Megachile rotundata]
Length = 205
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 111/119 (93%), Positives = 116/119 (97%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFKVVLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVE+ NE++KLQI
Sbjct: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVENEKVKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL DWLREIEEYAS KVLR+LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEEYASNKVLRILVG 119
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 67/96 (69%), Gaps = 8/96 (8%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDFA 220
L++V+ C P C +L +E +++N + + NKIDREDREIPT VGEDFA
Sbjct: 83 LILVYDISCQPTFD----CLPDWLREIEEYASNKVLRILVGNKIDREDREIPTHVGEDFA 138
Query: 221 KRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
+RH MY+LETSAK ++NVE+LFM+IAAELME+ K
Sbjct: 139 QRHGMYFLETSAKEAENVERLFMEIAAELMEQARSK 174
>gi|307207011|gb|EFN84834.1| Ras-related protein Rab-30 [Harpegnathos saltator]
Length = 205
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 111/119 (93%), Positives = 116/119 (97%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFKVVLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVE+ NE++KLQI
Sbjct: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVENEKVKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL DWLREIEEYAS KVLR+LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEEYASNKVLRILVG 119
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 67/96 (69%), Gaps = 8/96 (8%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDFA 220
L++V+ C P C +L +E +++N + + NKIDREDREIPT VGEDFA
Sbjct: 83 LILVYDISCQPTFD----CLPDWLREIEEYASNKVLRILVGNKIDREDREIPTHVGEDFA 138
Query: 221 KRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
+RH MY+LETSAK ++NVE+LFM+IAAELME+ K
Sbjct: 139 QRHGMYFLETSAKEAENVERLFMEIAAELMEQARSK 174
>gi|332024592|gb|EGI64790.1| Ras-related protein Rab-30 [Acromyrmex echinatior]
Length = 205
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/119 (93%), Positives = 116/119 (97%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFKVVLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVE+ NE++KLQI
Sbjct: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVENEKVKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL DWLREIEEYAS KVLR+LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLLDWLREIEEYASNKVLRILVG 119
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 66/92 (71%), Gaps = 8/92 (8%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDFA 220
L++V+ C P C +L +E +++N + + NKIDREDREIPT VGEDFA
Sbjct: 83 LILVYDISCQPTFD----CLLDWLREIEEYASNKVLRILVGNKIDREDREIPTHVGEDFA 138
Query: 221 KRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
+RH MY+LETSAK ++NVE+LFM+IAAELME+
Sbjct: 139 QRHGMYFLETSAKEAENVERLFMEIAAELMEQ 170
>gi|345484883|ref|XP_003425147.1| PREDICTED: ras-related protein Rab-30-like [Nasonia vitripennis]
Length = 205
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/119 (93%), Positives = 116/119 (97%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFKVVLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVE+ NE++KLQI
Sbjct: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVENEKVKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL DWLREIEEYAS KVLR+LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEEYASNKVLRILVG 119
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 66/92 (71%), Gaps = 8/92 (8%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDFA 220
L++V+ C P C +L +E +++N + + NKIDREDREIPT VGEDFA
Sbjct: 83 LILVYDISCQPTFD----CLPDWLREIEEYASNKVLRILVGNKIDREDREIPTHVGEDFA 138
Query: 221 KRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
+RH MY+LETSAK ++NVE+LFM+IAAELME+
Sbjct: 139 QRHGMYFLETSAKEAENVERLFMEIAAELMEQ 170
>gi|307167586|gb|EFN61130.1| Ras-related protein Rab-30 [Camponotus floridanus]
Length = 183
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 111/119 (93%), Positives = 116/119 (97%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFKVVLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVE+ NE++KLQI
Sbjct: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVENEKVKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL DWLREIEEYAS KVLR+LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEEYASNKVLRILVG 119
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 65/91 (71%), Gaps = 8/91 (8%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDFA 220
L++V+ C P C +L +E +++N + + NKIDREDREIPT VGEDFA
Sbjct: 83 LILVYDISCQPTFD----CLPDWLREIEEYASNKVLRILVGNKIDREDREIPTHVGEDFA 138
Query: 221 KRHDMYYLETSAKASDNVEKLFMQIAAELME 251
+RH MY+LETSAK ++NVE+LFM+IAAELME
Sbjct: 139 QRHGMYFLETSAKEAENVERLFMEIAAELME 169
>gi|242022587|ref|XP_002431721.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212517036|gb|EEB18983.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 202
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 109/119 (91%), Positives = 117/119 (98%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
M+DYKFLFKVVLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKT+EI+NE++KLQI
Sbjct: 1 MDDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTLEIDNEKVKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL DWLREI+EYAS KVLR+LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLNDWLREIQEYASSKVLRILVG 119
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 70/104 (67%), Gaps = 8/104 (7%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDFA 220
L++V+ C P C +L ++ ++++ + + NKIDREDREIPT VGEDFA
Sbjct: 83 LILVYDISCQPTFD----CLNDWLREIQEYASSKVLRILVGNKIDREDREIPTHVGEDFA 138
Query: 221 KRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIMHDRG 264
+R+ MY++ETSAK ++NVEKLFM+IAAEL E+ K + +D G
Sbjct: 139 QRNSMYFIETSAKEAENVEKLFMEIAAELREQAKSKELVRYDTG 182
>gi|189236660|ref|XP_970787.2| PREDICTED: similar to Rab30 CG9100-PB [Tribolium castaneum]
Length = 203
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 110/119 (92%), Positives = 117/119 (98%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
M+DYKFLFKVVLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTV+++NE++KLQI
Sbjct: 1 MDDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVDVDNEKVKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL DWLREIEEYAS KVLRVLVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEEYASSKVLRVLVG 119
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 66/92 (71%), Gaps = 8/92 (8%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDFA 220
L++V+ C P C +L +E ++++ + + NKIDREDREIPT VGE+FA
Sbjct: 83 LILVYDISCQPTFD----CLPDWLREIEEYASSKVLRVLVGNKIDREDREIPTHVGEEFA 138
Query: 221 KRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
+RH+MY+LETSAK ++NVE+LFMQIA +LM++
Sbjct: 139 ERHNMYFLETSAKEAENVERLFMQIAEDLMKQ 170
>gi|270005194|gb|EFA01642.1| hypothetical protein TcasGA2_TC007212 [Tribolium castaneum]
Length = 184
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 110/119 (92%), Positives = 117/119 (98%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
M+DYKFLFKVVLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTV+++NE++KLQI
Sbjct: 1 MDDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVDVDNEKVKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL DWLREIEEYAS KVLRVLVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEEYASSKVLRVLVG 119
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 65/91 (71%), Gaps = 8/91 (8%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDFA 220
L++V+ C P C +L +E ++++ + + NKIDREDREIPT VGE+FA
Sbjct: 83 LILVYDISCQPTFD----CLPDWLREIEEYASSKVLRVLVGNKIDREDREIPTHVGEEFA 138
Query: 221 KRHDMYYLETSAKASDNVEKLFMQIAAELME 251
+RH+MY+LETSAK ++NVE+LFMQIA +LM+
Sbjct: 139 ERHNMYFLETSAKEAENVERLFMQIAEDLMK 169
>gi|427788495|gb|JAA59699.1| Putative membrane-associated apoptosis protein [Rhipicephalus
pulchellus]
Length = 1136
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 109/143 (76%), Positives = 130/143 (90%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPGAESYR+TREEL+TMDKLHMALTELCFAINY ++I VWD TFAPREYL QHLE+RF++
Sbjct: 675 KPGAESYRRTREELSTMDKLHMALTELCFAINYASSIHVWDHTFAPREYLAQHLENRFNK 734
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
ALVGMVM+NP++ EIAKPSELL+SV+AYM+VLQ +EN+VH+D+TRVFNN LLQQTQ DS
Sbjct: 735 ALVGMVMYNPESHEIAKPSELLSSVQAYMSVLQGIENHVHVDVTRVFNNVLLQQTQPQDS 794
Query: 526 HGEKTVAALYIQWYSEVLLRRVS 548
HG+KT+A LY WY EVLLR+V+
Sbjct: 795 HGDKTIATLYTNWYLEVLLRKVT 817
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 69/102 (67%), Positives = 85/102 (83%), Gaps = 1/102 (0%)
Query: 566 VENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSLNQR 625
+EN+VH+D+TRVFNN LLQQTQ DSHG+KT+A LY WY EVLLR+V+AG++C+S R
Sbjct: 769 IENHVHVDVTRVFNNVLLQQTQPQDSHGDKTIATLYTNWYLEVLLRKVTAGHMCYSPLHR 828
Query: 626 AFVSLTAEG-AIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
AFV+L +G +PF AEEFSDV ELR+LA+LIGPYGMK LNE
Sbjct: 829 AFVNLVHDGQQVPFTAEEFSDVQELRSLAELIGPYGMKFLNE 870
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/97 (72%), Positives = 84/97 (86%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+++AEKLTI++DRGVGMLTRIYNIKKACGDAKSKPSFLSDK+LES IK +V++FPNIDI+
Sbjct: 10 QRIAEKLTILNDRGVGMLTRIYNIKKACGDAKSKPSFLSDKNLESAIKHVVRRFPNIDIR 69
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+S + IR DI+KSLSLYYYTFVDLL F+D V
Sbjct: 70 GNSAQLSAVFNIRQDIMKSLSLYYYTFVDLLDFRDHV 106
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 58/75 (77%)
Query: 126 IVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEACFY 185
+V+EMASAAGL C VDPAL AL S K DL +DE+ +ACLLMVFVAV +PKLAR E Y
Sbjct: 970 VVSEMASAAGLPCKVDPALVAALRSQKNDLGDDEYQVACLLMVFVAVSLPKLARTEGSVY 1029
Query: 186 LASLEGHSNNIHCMA 200
SLE H+NN+HC+A
Sbjct: 1030 KPSLEAHTNNMHCLA 1044
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYG--MKLLNELS-----LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
+A DL+ Y M LL+ + L FN AHEM H SD +FPRLGQ+I++Y+ P+K
Sbjct: 130 KAYLDLVAAYVTLMILLSRVEDRKAVLGLFNTAHEMTHGHSDNSFPRLGQLIVEYDPPLK 189
Query: 703 KLSEEFIPH 711
KL++EF+PH
Sbjct: 190 KLADEFVPH 198
>gi|427798199|gb|JAA64551.1| Putative membrane-associated apoptosis protein, partial
[Rhipicephalus pulchellus]
Length = 1116
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 109/143 (76%), Positives = 130/143 (90%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPGAESYR+TREEL+TMDKLHMALTELCFAINY ++I VWD TFAPREYL QHLE+RF++
Sbjct: 708 KPGAESYRRTREELSTMDKLHMALTELCFAINYASSIHVWDHTFAPREYLAQHLENRFNK 767
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
ALVGMVM+NP++ EIAKPSELL+SV+AYM+VLQ +EN+VH+D+TRVFNN LLQQTQ DS
Sbjct: 768 ALVGMVMYNPESHEIAKPSELLSSVQAYMSVLQGIENHVHVDVTRVFNNVLLQQTQPQDS 827
Query: 526 HGEKTVAALYIQWYSEVLLRRVS 548
HG+KT+A LY WY EVLLR+V+
Sbjct: 828 HGDKTIATLYTNWYLEVLLRKVT 850
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 69/102 (67%), Positives = 85/102 (83%), Gaps = 1/102 (0%)
Query: 566 VENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSLNQR 625
+EN+VH+D+TRVFNN LLQQTQ DSHG+KT+A LY WY EVLLR+V+AG++C+S R
Sbjct: 802 IENHVHVDVTRVFNNVLLQQTQPQDSHGDKTIATLYTNWYLEVLLRKVTAGHMCYSPLHR 861
Query: 626 AFVSLTAEG-AIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
AFV+L +G +PF AEEFSDV ELR+LA+LIGPYGMK LNE
Sbjct: 862 AFVNLVHDGQQVPFTAEEFSDVQELRSLAELIGPYGMKFLNE 903
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 70/97 (72%), Positives = 84/97 (86%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+++AEKLTI++DRGVGMLTRIYNIKKACGDAKSKPSFLSDK+LES IK +V++FPNIDI+
Sbjct: 10 QRIAEKLTILNDRGVGMLTRIYNIKKACGDAKSKPSFLSDKNLESAIKHVVRRFPNIDIR 69
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+S + IR DI+KSLSLYYYTFVDLL F+D V
Sbjct: 70 GNSAQLSAVFNIRQDIMKSLSLYYYTFVDLLDFRDHV 106
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 58/75 (77%)
Query: 126 IVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEACFY 185
+V+EMASAAGL C VDPAL AL S K DL +DE+ +ACLLMVFVAV +PKLAR E Y
Sbjct: 1003 VVSEMASAAGLPCKVDPALVAALRSQKNDLGDDEYQVACLLMVFVAVSLPKLARTEGSVY 1062
Query: 186 LASLEGHSNNIHCMA 200
SLE H+NN+HC+A
Sbjct: 1063 KPSLEAHTNNMHCLA 1077
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYG--MKLLNELS-----LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
+A DL+ Y M LL+ + L FN AHEM H SD +FPRLGQ+I++Y+ P+K
Sbjct: 130 KAYLDLVAAYVTLMILLSRVEDRKAVLGLFNTAHEMTHGHSDNSFPRLGQLIVEYDPPLK 189
Query: 703 KLSEEFIPH 711
KL++EF+PH
Sbjct: 190 KLADEFVPH 198
>gi|427798197|gb|JAA64550.1| Putative membrane-associated apoptosis protein, partial
[Rhipicephalus pulchellus]
Length = 1086
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 109/143 (76%), Positives = 130/143 (90%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPGAESYR+TREEL+TMDKLHMALTELCFAINY ++I VWD TFAPREYL QHLE+RF++
Sbjct: 698 KPGAESYRRTREELSTMDKLHMALTELCFAINYASSIHVWDHTFAPREYLAQHLENRFNK 757
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
ALVGMVM+NP++ EIAKPSELL+SV+AYM+VLQ +EN+VH+D+TRVFNN LLQQTQ DS
Sbjct: 758 ALVGMVMYNPESHEIAKPSELLSSVQAYMSVLQGIENHVHVDVTRVFNNVLLQQTQPQDS 817
Query: 526 HGEKTVAALYIQWYSEVLLRRVS 548
HG+KT+A LY WY EVLLR+V+
Sbjct: 818 HGDKTIATLYTNWYLEVLLRKVT 840
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 69/102 (67%), Positives = 85/102 (83%), Gaps = 1/102 (0%)
Query: 566 VENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSLNQR 625
+EN+VH+D+TRVFNN LLQQTQ DSHG+KT+A LY WY EVLLR+V+AG++C+S R
Sbjct: 792 IENHVHVDVTRVFNNVLLQQTQPQDSHGDKTIATLYTNWYLEVLLRKVTAGHMCYSPLHR 851
Query: 626 AFVSLTAEG-AIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
AFV+L +G +PF AEEFSDV ELR+LA+LIGPYGMK LNE
Sbjct: 852 AFVNLVHDGQQVPFTAEEFSDVQELRSLAELIGPYGMKFLNE 893
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/97 (72%), Positives = 84/97 (86%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+++AEKLTI++DRGVGMLTRIYNIKKACGDAKSKPSFLSDK+LES IK +V++FPNIDI+
Sbjct: 10 QRIAEKLTILNDRGVGMLTRIYNIKKACGDAKSKPSFLSDKNLESAIKHVVRRFPNIDIR 69
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+S + IR DI+KSLSLYYYTFVDLL F+D V
Sbjct: 70 GNSAQLSAVFNIRQDIMKSLSLYYYTFVDLLDFRDHV 106
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 58/75 (77%)
Query: 126 IVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEACFY 185
+V+EMASAAGL C VDPAL AL S K DL +DE+ +ACLLMVFVAV +PKLAR E Y
Sbjct: 993 VVSEMASAAGLPCKVDPALVAALRSQKNDLGDDEYQVACLLMVFVAVSLPKLARTEGSVY 1052
Query: 186 LASLEGHSNNIHCMA 200
SLE H+NN+HC+A
Sbjct: 1053 KPSLEAHTNNMHCLA 1067
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYG--MKLLNELS-----LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
+A DL+ Y M LL+ + L FN AHEM H SD +FPRLGQ+I++Y+ P+K
Sbjct: 130 KAYLDLVAAYVTLMILLSRVEDRKAVLGLFNTAHEMTHGHSDNSFPRLGQLIVEYDPPLK 189
Query: 703 KLSEEFIPH 711
KL++EF+PH
Sbjct: 190 KLADEFVPH 198
>gi|260791088|ref|XP_002590572.1| hypothetical protein BRAFLDRAFT_123628 [Branchiostoma floridae]
gi|229275767|gb|EEN46583.1| hypothetical protein BRAFLDRAFT_123628 [Branchiostoma floridae]
Length = 1136
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/189 (63%), Positives = 146/189 (77%), Gaps = 2/189 (1%)
Query: 387 IASRRKKDKNN-KKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVW 445
IA RK+++N KK+ E KPG ES R++R ++T+MDKL++ LTELC AINY +IQVW
Sbjct: 645 IAIERKRNQNKAKKLPQEPDKPGRESMRRSRTDVTSMDKLYLMLTELCSAINYTPSIQVW 704
Query: 446 DFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVH 505
+ TFAPREYL QHLESRF++ALVGMVM+NPD+ EIAKPSELL SV AYM VLQT+ENYVH
Sbjct: 705 EHTFAPREYLTQHLESRFTKALVGMVMYNPDSGEIAKPSELLNSVEAYMGVLQTIENYVH 764
Query: 506 IDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQVK-SLNLLNFLRVY 564
+D+TRVFNN LLQQTQ DSHG+KT+ ALY WY EVLLRRVS Q+ S N F+ V
Sbjct: 765 LDITRVFNNVLLQQTQPQDSHGDKTITALYTNWYLEVLLRRVSTGQIMFSPNRHAFVNVG 824
Query: 565 TVENYVHID 573
N V ++
Sbjct: 825 VDPNQVAVN 833
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/120 (60%), Positives = 89/120 (74%), Gaps = 6/120 (5%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LLN + Y T+ENYVH+D+TRVFNN LLQQTQ DSHG+KT+ ALY WY E
Sbjct: 741 KPSELLNSVEAYMGVLQTIENYVHLDITRVFNNVLLQQTQPQDSHGDKTITALYTNWYLE 800
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAE-GAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
VLLRRVS G I FS N+ AFV++ + + NAEEFSD++ELR+LA+L+GPYGMK LNE
Sbjct: 801 VLLRRVSTGQIMFSPNRHAFVNVGVDPNQVAVNAEEFSDISELRSLAELLGPYGMKFLNE 860
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 80/97 (82%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLT+++DR +GMLTRIYNIKKACGD KSKP+FLSDK+LE IK IV+KFP++D K
Sbjct: 12 QKLAEKLTVLNDRAMGMLTRIYNIKKACGDVKSKPAFLSDKNLEGAIKFIVRKFPHVDSK 71
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ + ++ I+ +I+K LSLYY+TFVD++ FKD V
Sbjct: 72 NNYSQLQQVNNIKGEIMKQLSLYYFTFVDVMDFKDHV 108
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 59/78 (75%)
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEAC 183
++IVNEMASAAGL C VDPAL AL K++ ++++ +ACLLMVF+AV +P L+ +
Sbjct: 964 VEIVNEMASAAGLPCDVDPALCAALRVQKSENPDEDYKIACLLMVFIAVSLPMLSLDSQS 1023
Query: 184 FYLASLEGHSNNIHCMAR 201
+ A LEGH+NNIHC+A+
Sbjct: 1024 SFRADLEGHTNNIHCLAK 1041
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 33/46 (71%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L +N AH++ H + D NF RLGQMI+DYE P+KKL EEF PH +
Sbjct: 158 LGLYNYAHDLTHGKVDQNFARLGQMILDYEQPLKKLQEEFTPHSKL 203
>gi|357605862|gb|EHJ64809.1| hypothetical protein KGM_02869 [Danaus plexippus]
Length = 200
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/119 (91%), Positives = 116/119 (97%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFKVVLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVE++ E++KLQI
Sbjct: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL DWLREIEEYA+ KVLR+LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEEYANNKVLRILVG 119
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 72/118 (61%), Gaps = 8/118 (6%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDFA 220
L++V+ C P C +L +E ++NN + + NK DREDREIP +GEDFA
Sbjct: 83 LILVYDISCQPTFD----CLPDWLREIEEYANNKVLRILVGNKTDREDREIPRHIGEDFA 138
Query: 221 KRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKAC 278
+RH MY+LETSAK ++NVE+LFM+IA ELME+ K +D +G + + +C
Sbjct: 139 QRHGMYFLETSAKEAENVERLFMEIAVELMEQAKCKELPKYDGSLGPINGKTSSDSSC 196
>gi|195434194|ref|XP_002065088.1| GK14858 [Drosophila willistoni]
gi|194161173|gb|EDW76074.1| GK14858 [Drosophila willistoni]
Length = 230
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 107/119 (89%), Positives = 115/119 (96%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFK+VLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVE+ E+IKLQI
Sbjct: 1 MEDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL DWLREI+EYA+ KVL++LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVG 119
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 66/96 (68%), Gaps = 8/96 (8%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDFA 220
L++V+ C P C +L ++ ++N+ + + NK DR+DREIPT++GE+FA
Sbjct: 83 LILVYDISCQPTFD----CLPDWLREIQEYANSKVLKILVGNKTDRDDREIPTQIGEEFA 138
Query: 221 KRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
K+HDMY+LETSAK ++NVE+LF +IAAEL+ + K
Sbjct: 139 KQHDMYFLETSAKEAENVERLFYEIAAELIGQARSK 174
>gi|195050245|ref|XP_001992853.1| GH13416 [Drosophila grimshawi]
gi|193899912|gb|EDV98778.1| GH13416 [Drosophila grimshawi]
Length = 226
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 107/119 (89%), Positives = 115/119 (96%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFK+VLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVE+ E+IKLQI
Sbjct: 1 MEDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL DWLREI+EYA+ KVL++LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVG 119
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 66/97 (68%), Gaps = 8/97 (8%)
Query: 164 CLLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDF 219
L++V+ C P C +L ++ ++N+ + + NK DR+DREIPT++GE+F
Sbjct: 82 ALILVYDISCQPTFD----CLPDWLREIQEYANSKVLKILVGNKTDRDDREIPTQIGEEF 137
Query: 220 AKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
AK+HDMY+LETSAK ++NVE+LF +IAAEL+ + K
Sbjct: 138 AKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSK 174
>gi|194862770|ref|XP_001970114.1| GG23555 [Drosophila erecta]
gi|190661981|gb|EDV59173.1| GG23555 [Drosophila erecta]
Length = 223
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 107/119 (89%), Positives = 115/119 (96%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFK+VLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVE+ E+IKLQI
Sbjct: 1 MEDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL DWLREI+EYA+ KVL++LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVG 119
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 66/96 (68%), Gaps = 8/96 (8%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDFA 220
L++V+ C P C +L ++ ++N+ + + NK DR+DREIPT++GE+FA
Sbjct: 83 LILVYDISCQPTFD----CLPDWLREIQEYANSKVLKILVGNKTDRDDREIPTQIGEEFA 138
Query: 221 KRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
K+HDMY+LETSAK ++NVE+LF +IAAEL+ + K
Sbjct: 139 KQHDMYFLETSAKEAENVERLFYEIAAELIGQARSK 174
>gi|195471587|ref|XP_002088084.1| GE18380 [Drosophila yakuba]
gi|194174185|gb|EDW87796.1| GE18380 [Drosophila yakuba]
Length = 223
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 107/119 (89%), Positives = 115/119 (96%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFK+VLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVE+ E+IKLQI
Sbjct: 1 MEDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL DWLREI+EYA+ KVL++LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVG 119
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 66/96 (68%), Gaps = 8/96 (8%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDFA 220
L++V+ C P C +L ++ ++N+ + + NK DR+DREIPT++GE+FA
Sbjct: 83 LILVYDISCQPTFD----CLPDWLREIQEYANSKVLKILVGNKTDRDDREIPTQIGEEFA 138
Query: 221 KRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
K+HDMY+LETSAK ++NVE+LF +IAAEL+ + K
Sbjct: 139 KQHDMYFLETSAKEAENVERLFYEIAAELIGQARSK 174
>gi|194758323|ref|XP_001961411.1| GF14944 [Drosophila ananassae]
gi|190615108|gb|EDV30632.1| GF14944 [Drosophila ananassae]
Length = 225
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 107/119 (89%), Positives = 115/119 (96%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFK+VLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVE+ E+IKLQI
Sbjct: 1 MEDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL DWLREI+EYA+ KVL++LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVG 119
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 66/96 (68%), Gaps = 8/96 (8%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDFA 220
L++V+ C P C +L ++ ++N+ + + NK DR+DREIPT++GE+FA
Sbjct: 83 LILVYDISCQPTFD----CLPDWLREIQEYANSKVLKILVGNKTDRDDREIPTQIGEEFA 138
Query: 221 KRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
K+HDMY+LETSAK ++NVE+LF +IAAEL+ + K
Sbjct: 139 KQHDMYFLETSAKEAENVERLFYEIAAELIGQARSK 174
>gi|198476545|ref|XP_001357389.2| GA21542 [Drosophila pseudoobscura pseudoobscura]
gi|198137745|gb|EAL34458.2| GA21542 [Drosophila pseudoobscura pseudoobscura]
Length = 230
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 107/119 (89%), Positives = 115/119 (96%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFK+VLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVE+ E+IKLQI
Sbjct: 1 MEDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL DWLREI+EYA+ KVL++LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVG 119
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 66/96 (68%), Gaps = 8/96 (8%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDFA 220
L++V+ C P C +L ++ ++N+ + + NK DR+DREIPT++GE+FA
Sbjct: 83 LILVYDISCQPTFD----CLPDWLREIQEYANSKVLKILVGNKTDRDDREIPTQIGEEFA 138
Query: 221 KRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
K+HDMY+LETSAK ++NVE+LF +IAAEL+ + K
Sbjct: 139 KQHDMYFLETSAKEAENVERLFYEIAAELIGQARSK 174
>gi|195397965|ref|XP_002057598.1| GJ18220 [Drosophila virilis]
gi|194141252|gb|EDW57671.1| GJ18220 [Drosophila virilis]
Length = 225
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 107/119 (89%), Positives = 115/119 (96%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFK+VLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVE+ E+IKLQI
Sbjct: 1 MEDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL DWLREI+EYA+ KVL++LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVG 119
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 66/96 (68%), Gaps = 8/96 (8%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDFA 220
L++V+ C P C +L ++ ++N+ + + NK DR+DREIPT++GE+FA
Sbjct: 83 LILVYDISCQPTFD----CLPDWLREIQEYANSKVLKILVGNKTDRDDREIPTQIGEEFA 138
Query: 221 KRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
K+HDMY+LETSAK ++NVE+LF +IAAEL+ + K
Sbjct: 139 KQHDMYFLETSAKEAENVERLFYEIAAELIGQARSK 174
>gi|195116811|ref|XP_002002945.1| GI17653 [Drosophila mojavensis]
gi|193913520|gb|EDW12387.1| GI17653 [Drosophila mojavensis]
Length = 230
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 107/119 (89%), Positives = 115/119 (96%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFK+VLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVE+ E+IKLQI
Sbjct: 1 MEDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL DWLREI+EYA+ KVL++LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVG 119
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 64/91 (70%), Gaps = 8/91 (8%)
Query: 164 CLLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDF 219
L++V+ C P C +L ++ ++N+ + + NK DR+DREIPT++GE+F
Sbjct: 82 ALILVYDISCQPTFD----CLPDWLREIQEYANSKVLKILVGNKTDRDDREIPTQIGEEF 137
Query: 220 AKRHDMYYLETSAKASDNVEKLFMQIAAELM 250
AK+HDMY+LETSAK ++NVE+LF +IAAEL+
Sbjct: 138 AKQHDMYFLETSAKEAENVERLFYEIAAELI 168
>gi|195155755|ref|XP_002018766.1| GL25775 [Drosophila persimilis]
gi|194114919|gb|EDW36962.1| GL25775 [Drosophila persimilis]
Length = 232
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 107/119 (89%), Positives = 115/119 (96%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFK+VLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVE+ E+IKLQI
Sbjct: 1 MEDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL DWLREI+EYA+ KVL++LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVG 119
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 66/96 (68%), Gaps = 8/96 (8%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDFA 220
L++V+ C P C +L ++ ++N+ + + NK DR+DREIPT++GE+FA
Sbjct: 83 LILVYDISCQPTFD----CLPDWLREIQEYANSKVLKILVGNKTDRDDREIPTQIGEEFA 138
Query: 221 KRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
K+HDMY+LETSAK ++NVE+LF +IAAEL+ + K
Sbjct: 139 KQHDMYFLETSAKEAENVERLFYEIAAELIGQARSK 174
>gi|19920864|ref|NP_609094.1| Rab30, isoform B [Drosophila melanogaster]
gi|24582407|ref|NP_723241.1| Rab30, isoform A [Drosophila melanogaster]
gi|24582410|ref|NP_723242.1| Rab30, isoform C [Drosophila melanogaster]
gi|386769264|ref|NP_001245926.1| Rab30, isoform D [Drosophila melanogaster]
gi|195338837|ref|XP_002036030.1| GM13645 [Drosophila sechellia]
gi|7297212|gb|AAF52477.1| Rab30, isoform A [Drosophila melanogaster]
gi|17945290|gb|AAL48702.1| RE14786p [Drosophila melanogaster]
gi|22945832|gb|AAN10612.1| Rab30, isoform B [Drosophila melanogaster]
gi|22945833|gb|AAN10613.1| Rab30, isoform C [Drosophila melanogaster]
gi|194129910|gb|EDW51953.1| GM13645 [Drosophila sechellia]
gi|220947990|gb|ACL86538.1| Rab30-PA [synthetic construct]
gi|220957300|gb|ACL91193.1| Rab30-PA [synthetic construct]
gi|383291378|gb|AFH03600.1| Rab30, isoform D [Drosophila melanogaster]
Length = 223
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 107/119 (89%), Positives = 115/119 (96%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFK+VLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVE+ E+IKLQI
Sbjct: 1 MEDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL DWLREI+EYA+ KVL++LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVG 119
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 66/96 (68%), Gaps = 8/96 (8%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDFA 220
L++V+ C P C +L ++ ++N+ + + NK DR+DREIPT++GE+FA
Sbjct: 83 LILVYDISCQPTFD----CLPDWLREIQEYANSKVLKILVGNKTDRDDREIPTQIGEEFA 138
Query: 221 KRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
K+HDMY+LETSAK ++NVE+LF +IAAEL+ + K
Sbjct: 139 KQHDMYFLETSAKEAENVERLFYEIAAELIGQARSK 174
>gi|427792313|gb|JAA61608.1| Putative rab30, partial [Rhipicephalus pulchellus]
Length = 217
Score = 239 bits (609), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 107/119 (89%), Positives = 115/119 (96%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFKVVL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDF+IKTVE++ E++KLQI
Sbjct: 10 MEDYKFLFKVVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFLIKTVEVDGEKVKLQI 69
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL DWLREIE+YAS KVLR LVG
Sbjct: 70 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEQYASPKVLRALVG 128
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 69/120 (57%), Gaps = 8/120 (6%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDFA 220
L++V+ C P C +L +E +++ + + NKIDREDREIPT +GE+FA
Sbjct: 92 LILVYDISCQPTFD----CLPDWLREIEQYASPKVLRALVGNKIDREDREIPTHIGEEFA 147
Query: 221 KRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGD 280
+R DMY++ETSAK +DNV+KLF +IA L + R + ++K+A GD
Sbjct: 148 RRSDMYFVETSAKEADNVDKLFTEIAVRLTAEARATHARYSGRPSTTGDSLPDLKEAAGD 207
>gi|241616943|ref|XP_002408087.1| RAS family protein, putative [Ixodes scapularis]
gi|215502924|gb|EEC12418.1| RAS family protein, putative [Ixodes scapularis]
Length = 230
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 107/119 (89%), Positives = 115/119 (96%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFKVVL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDF+IKTVE++ E++KLQI
Sbjct: 22 MEDYKFLFKVVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFLIKTVEVDGEKVKLQI 81
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL DWLREIE+YAS KVLR LVG
Sbjct: 82 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEQYASPKVLRALVG 140
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 69/120 (57%), Gaps = 8/120 (6%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDFA 220
L++V+ C P C +L +E +++ + + NKIDREDREIP +GE+FA
Sbjct: 104 LILVYDISCQPTFD----CLPDWLREIEQYASPKVLRALVGNKIDREDREIPQHIGEEFA 159
Query: 221 KRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGD 280
+R+DMY++ETSAK +DNV+KLF +IA L + R + ++K+A GD
Sbjct: 160 RRNDMYFVETSAKEADNVDKLFTEIAVRLTAEARATHARYSGRPSAATDSLPDLKEASGD 219
>gi|328716995|ref|XP_001945306.2| PREDICTED: ras-related protein Rab-30-like [Acyrthosiphon pisum]
Length = 201
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 106/119 (89%), Positives = 116/119 (97%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFKVVLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKT+EI+NE++KLQI
Sbjct: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTIEIDNEKVKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALIL+YDI+ QPTFDCL DWLREI+EYA+ +VLRVLVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILIYDITSQPTFDCLNDWLREIDEYANNRVLRVLVG 119
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 59/74 (79%), Gaps = 2/74 (2%)
Query: 185 YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLF 242
+L ++ ++NN + + NKID+EDREIP+ VG+DFA+RHDM YLETSAK +DNVEKLF
Sbjct: 101 WLREIDEYANNRVLRVLVGNKIDKEDREIPSHVGQDFAQRHDMRYLETSAKQADNVEKLF 160
Query: 243 MQIAAELMEKLAEK 256
+QIA+ELME+ K
Sbjct: 161 VQIASELMEQAKSK 174
>gi|347967168|ref|XP_320947.5| AGAP002092-PA [Anopheles gambiae str. PEST]
gi|333469728|gb|EAA01022.5| AGAP002092-PA [Anopheles gambiae str. PEST]
Length = 237
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 106/119 (89%), Positives = 116/119 (97%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFKVVLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVE++N++IKLQI
Sbjct: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDNQKIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA ALILVYDISCQPTFDCL DWLREI+E+A+ KVL++LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSASALILVYDISCQPTFDCLPDWLREIQEHANSKVLKILVG 119
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 63/98 (64%), Gaps = 8/98 (8%)
Query: 163 ACLLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGED 218
+ L++V+ C P C +L ++ H+N+ + + NK DR+DREIP EVG +
Sbjct: 81 SALILVYDISCQPTFD----CLPDWLREIQEHANSKVLKILVGNKTDRDDREIPQEVGAE 136
Query: 219 FAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
FAK+H MY+LETSAK +DNVE+LF IAA L+E+ K
Sbjct: 137 FAKQHGMYFLETSAKQADNVERLFYDIAAVLIEQARTK 174
>gi|195577211|ref|XP_002078466.1| GD22516 [Drosophila simulans]
gi|194190475|gb|EDX04051.1| GD22516 [Drosophila simulans]
Length = 223
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 105/119 (88%), Positives = 113/119 (94%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFK+VLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIK VE+ E+IKLQI
Sbjct: 1 MEDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKKVEVEGEKIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRS TQSYYRSAHALILVYDISCQPTFDCL DWLREI+EYA+ KVL++LVG
Sbjct: 61 WDTAGQERFRSSTQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVG 119
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 66/96 (68%), Gaps = 8/96 (8%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDFA 220
L++V+ C P C +L ++ ++N+ + + NK DR+DREIPT++GE+FA
Sbjct: 83 LILVYDISCQPTFD----CLPDWLREIQEYANSKVLKILVGNKTDRDDREIPTQIGEEFA 138
Query: 221 KRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
K+HDMY+LETSAK ++NVE+LF +IAAEL+ + K
Sbjct: 139 KQHDMYFLETSAKEAENVERLFYEIAAELIGQARSK 174
>gi|391338263|ref|XP_003743479.1| PREDICTED: ras-related protein Rab-30-like [Metaseiulus
occidentalis]
Length = 202
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 103/119 (86%), Positives = 114/119 (95%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFKVVL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDF+IKTVE++ +++KLQI
Sbjct: 1 MEDYKFLFKVVLIGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFLIKTVEVDGDKVKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHAL+LVYDIS QPTFDCL DWLREIE+YAS KVLR +VG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALVLVYDISSQPTFDCLPDWLREIEQYASPKVLRAVVG 119
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 47/57 (82%)
Query: 196 IHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
+ + NKIDR+DREIPT +GE+FA+R+DMY++ETSAK +DNVEKLF +IA L ++
Sbjct: 114 LRAVVGNKIDRDDREIPTHIGEEFARRNDMYFIETSAKEADNVEKLFTEIAHRLTQE 170
>gi|291233433|ref|XP_002736659.1| PREDICTED: NCK-associated protein 1-like [Saccoglossus kowalevskii]
Length = 1079
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/166 (64%), Positives = 132/166 (79%)
Query: 387 IASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWD 446
+++++KK + L + KPG ES RKTREE T MDK HM LTELC+AINY +IQ+W+
Sbjct: 599 LSAQKKKGNARNRNLPPLEKPGEESKRKTREEFTPMDKYHMELTELCYAINYTGSIQIWE 658
Query: 447 FTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHI 506
FAPREYL HLE+RF++A+VGM+M NP+++EIAKPSELLASVR YM VLQT+ENYVHI
Sbjct: 659 HIFAPREYLIAHLEARFNKAVVGMMMHNPESNEIAKPSELLASVRTYMGVLQTIENYVHI 718
Query: 507 DMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
D+TRVFNN LLQQTQ +DSHG+KTV +Y WY EVLLRRVS +
Sbjct: 719 DITRVFNNVLLQQTQPLDSHGDKTVTHIYTNWYLEVLLRRVSAGNI 764
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 79/119 (66%), Positives = 93/119 (78%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y T+ENYVHID+TRVFNN LLQQTQ +DSHG+KTV +Y WY E
Sbjct: 694 KPSELLASVRTYMGVLQTIENYVHIDITRVFNNVLLQQTQPLDSHGDKTVTHIYTNWYLE 753
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
VLLRRVSAGNICFS N +AFVSL+ EG + NAEE+SD+ E+RALA+L+GPYGMK LNE
Sbjct: 754 VLLRRVSAGNICFSPNHKAFVSLSNEGNMGINAEEYSDITEMRALAELLGPYGMKFLNE 812
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 80/90 (88%)
Query: 252 KLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS 311
KLAEKLTI++DRG GMLTRIYNIKKAC D+KSKPSFLSDK L+SC+K IV+KFPNID +
Sbjct: 11 KLAEKLTIINDRGSGMLTRIYNIKKACQDSKSKPSFLSDKQLDSCVKYIVRKFPNIDKNN 70
Query: 312 VSGISQIRSDIVKSLSLYYYTFVDLLHFKD 341
+ ++ I++D+VKSLSLYY+TFVDL+ FKD
Sbjct: 71 LGPVAMIKNDVVKSLSLYYFTFVDLMDFKD 100
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%)
Query: 125 KIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEACF 184
+IVNEMASAAG C +DPAL +AL +++ ED++ ++CLLMVFVAV IP LAR+E F
Sbjct: 912 EIVNEMASAAGRQCDIDPALVSALRQQQSENSEDDYRISCLLMVFVAVAIPTLARSENSF 971
Query: 185 YLASLEGHSNNIHCMAR 201
Y + LEGH NN HC+A+
Sbjct: 972 YKSYLEGHGNNCHCIAK 988
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 684 DVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
D NFPRLGQMI++YE P KKL EEF+PH ++
Sbjct: 129 DTNFPRLGQMIIEYEHPFKKLCEEFVPHSNL 159
>gi|321476906|gb|EFX87865.1| hypothetical protein DAPPUDRAFT_95911 [Daphnia pulex]
Length = 177
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/119 (89%), Positives = 113/119 (94%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYK+LFKVVL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEI+ +IKLQI
Sbjct: 1 MEDYKYLFKVVLIGNAGVGKTCLVRRFTQGIFPPGQGATIGVDFMIKTVEIDGLKIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILVYD+S QPTFDCL WLRE+EEYAS KVLRVLVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVYDVSAQPTFDCLPVWLREVEEYASPKVLRVLVG 119
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 43/56 (76%)
Query: 196 IHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELME 251
+ + NK+DR+DREIP VGE F++ ++MY++ETSAK NV+KLF +IA EL++
Sbjct: 114 LRVLVGNKVDRDDREIPPAVGEAFSRMNNMYFIETSAKDCSNVDKLFQEIARELIQ 169
>gi|390342512|ref|XP_788871.3| PREDICTED: nck-associated protein 1 [Strongylocentrotus purpuratus]
Length = 1134
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 106/186 (56%), Positives = 139/186 (74%)
Query: 367 LNEIIKPGAESYRKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLH 426
L++ + P + + E Q +++ DKN K L E PG ES+RKTRE LT D+LH
Sbjct: 633 LSDQLLPKNAAPLHIKHELQRKTKQNVDKNRLKTLQENPMPGTESFRKTRENLTEFDRLH 692
Query: 427 MALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSEL 486
++L+ELC AINY I VW+ TFAPREYL QHLE+RF++ALVGM+M++P+T+EIAKPSEL
Sbjct: 693 ISLSELCTAINYSAKIMVWEHTFAPREYLIQHLEARFAKALVGMMMYSPETNEIAKPSEL 752
Query: 487 LASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRR 546
L SVR YMNVLQ++E+YV +D+TRVFNN +LQQTQ+ DSHGEKT+ LY WY EV LR+
Sbjct: 753 LTSVRTYMNVLQSIESYVQVDITRVFNNVMLQQTQQQDSHGEKTITMLYTNWYLEVFLRK 812
Query: 547 VSETQV 552
V+ +
Sbjct: 813 VTTCHI 818
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 88/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++E+YV +D+TRVFNN +LQQTQ+ DSHGEKT+ LY WY E
Sbjct: 748 KPSELLTSVRTYMNVLQSIESYVQVDITRVFNNVMLQQTQQQDSHGEKTITMLYTNWYLE 807
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
V LR+V+ +I +S +Q+AF+SL + +PFNAEE++DV ELR+LA+LIG YGMK L+E
Sbjct: 808 VFLRKVTTCHIIYSPHQKAFISLAPDKHLPFNAEEYTDVTELRSLAELIGAYGMKFLHE 866
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 74/103 (71%), Gaps = 11/103 (10%)
Query: 252 KLAEKLTIMHDRGVGMLTRIYNIKK--------ACGDAKSKPSFLSDKSLESCIKQIVKK 303
KLAE L+I+++RG GML R+YNIKK AC D KS+P+FLS+KSLESC+K IVKK
Sbjct: 9 KLAETLSILNERGSGMLARLYNIKKEYQLEVYKACQDPKSRPAFLSEKSLESCLKSIVKK 68
Query: 304 FPNIDIKSVSGISQI---RSDIVKSLSLYYYTFVDLLHFKDCV 343
FP+ + S +S I +++I+K LS+YY TF D+L +KD V
Sbjct: 69 FPHTEKNSHGQLSPIDTRKAEILKVLSVYYMTFRDILEYKDHV 111
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 126 IVNEMASAAGLLCTVDPALATALASDK-TDLDEDEHVLACLLMVFVAVCIPKLARNEACF 184
+V+ +A++ GL C VDP L +AL S+K D D+D ++ +CLLMVFVAV + LAR E
Sbjct: 968 VVDTLANSVGLPCNVDPVLVSALRSEKEIDPDQD-YIQSCLLMVFVAVSLRTLARQEGTI 1026
Query: 185 YLASLEGHSNNIHCMAR 201
Y + H NN HC A+
Sbjct: 1027 YHPMYDAHPNNCHCYAK 1043
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 33/42 (78%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIP 710
L +N A+++ + +S+ +F RLG MIM+YE PMKKL+EEFIP
Sbjct: 161 LGLYNTAYDLANQRSEPSFARLGTMIMEYEHPMKKLAEEFIP 202
>gi|443716907|gb|ELU08200.1| hypothetical protein CAPTEDRAFT_110813 [Capitella teleta]
Length = 203
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 104/135 (77%), Positives = 115/135 (85%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYK+LFKVVL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEI+ E++KLQI
Sbjct: 1 MEDYKYLFKVVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIDGEKVKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGG 120
WDTAGQERFRSITQ YYRSA+ALI+VYDISCQPTFDCL WL+EIE YAS KV LVG
Sbjct: 61 WDTAGQERFRSITQGYYRSANALIVVYDISCQPTFDCLPQWLKEIEHYASTKVFSYLVGN 120
Query: 121 TSGLKIVNEMASAAG 135
S E+ + G
Sbjct: 121 KSDRASQREIPAYVG 135
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDR-EDREIPTEVGEDF 219
L++V+ C P C +L +E +++ + NK DR REIP VGEDF
Sbjct: 83 LIVVYDISCQPTFD----CLPQWLKEIEHYASTKVFSYLVGNKSDRASQREIPAYVGEDF 138
Query: 220 AKRHDMYYLETSAKASDNVEKLFMQIAAEL 249
A+ HDM ++ETSAK +DNV+ LF IA EL
Sbjct: 139 ARLHDMEFIETSAKEADNVDSLFYDIAKEL 168
>gi|289741677|gb|ADD19586.1| GTPase Rab30 [Glossina morsitans morsitans]
Length = 179
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 99/108 (91%), Positives = 106/108 (98%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFK+VLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVE++ ++IKLQI
Sbjct: 1 MEDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGDKIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEY 108
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL DWLREI+EY
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEY 108
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 218 DFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
D+ + Y+LETSAK ++NVE+LF +IAAEL+++ K
Sbjct: 100 DWLREIQEYFLETSAKEAENVERLFYEIAAELIDQARRK 138
>gi|225713578|gb|ACO12635.1| Ras-related protein Rab-30 [Lepeophtheirus salmonis]
gi|290561959|gb|ADD38377.1| Ras-related protein Rab-30 [Lepeophtheirus salmonis]
Length = 203
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 103/119 (86%), Positives = 112/119 (94%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYK+LFKVVLVGNAGVGKTCLVR+FTQG+FPPGQGATIGVDFMIKT+EI E+IKLQI
Sbjct: 1 MEDYKYLFKVVLVGNAGVGKTCLVRQFTQGMFPPGQGATIGVDFMIKTLEIQGEKIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILV+D+S QPTFD +WLREIEEYAS KVL+VLVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVFDVSNQPTFDSCPEWLREIEEYASPKVLKVLVG 119
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 49/61 (80%)
Query: 196 IHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAE 255
+ + NK DR+DREIP E+GEDFA+R+ MYYLETSAK+ DNVE+LF++IA EL+++
Sbjct: 114 LKVLVGNKTDRDDREIPEEIGEDFAQRYSMYYLETSAKSCDNVERLFVEIAQELLQQAKS 173
Query: 256 K 256
K
Sbjct: 174 K 174
>gi|17555898|ref|NP_499328.1| Protein RAB-30 [Caenorhabditis elegans]
gi|3881017|emb|CAA21489.1| Protein RAB-30 [Caenorhabditis elegans]
Length = 216
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 97/119 (81%), Positives = 113/119 (94%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYK+LFKVVLVGNAGVGKTCLVR+FTQG+FPPGQ ATIGVDFMIKTV++ N++IKLQI
Sbjct: 1 MEDYKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHA++LVYD+SCQP+FDCL +WL EIE YA+ +VL++LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHAIVLVYDVSCQPSFDCLPEWLGEIESYANRRVLKILVG 119
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 12/100 (12%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDRED-REIPTEVGEDF 219
+++V+ C P C +L +E ++N + + NK+D+ D RE+P +G DF
Sbjct: 83 IVLVYDVSCQPSFD----CLPEWLGEIESYANRRVLKILVGNKVDKGDEREVPERIGRDF 138
Query: 220 AKRHDM-YYLETSAKASDNVEKLFMQIAAELMEKLAEKLT 258
+ + Y+LETSA + NV++LF Q+A L + KLT
Sbjct: 139 SDVNQFDYFLETSALDATNVDQLFEQVATRLTNDM--KLT 176
>gi|312086652|ref|XP_003145161.1| RAB family member [Loa loa]
gi|307759675|gb|EFO18909.1| RAB family member [Loa loa]
Length = 209
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 96/119 (80%), Positives = 115/119 (96%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYK+LFKVVLVGNAGVGKTCLVR+FTQG+FPPGQ ATIGVDFMIKTV++N+++IKLQI
Sbjct: 1 MEDYKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVNDDKIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHA++LVYD++CQP+FDCL +WL EIE+YA+ +VL++LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHAIVLVYDVACQPSFDCLPEWLGEIEQYANRRVLKILVG 119
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDRED-REIPTEVGEDF 219
+++V+ C P C +L +E ++N + + NKID+ED RE+P +G++F
Sbjct: 83 IVLVYDVACQPSFD----CLPEWLGEIEQYANRRVLKILVGNKIDKEDEREVPERIGKNF 138
Query: 220 AKRHDM-YYLETSAKASDNVEKLFMQIAAELMEKL 253
A + Y+LETSA + NV+ LF ++A L +
Sbjct: 139 ADANAFDYFLETSALDATNVDTLFHEVATRLTNDM 173
>gi|308497774|ref|XP_003111074.1| CRE-RAB-30 protein [Caenorhabditis remanei]
gi|308242954|gb|EFO86906.1| CRE-RAB-30 protein [Caenorhabditis remanei]
Length = 214
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 97/119 (81%), Positives = 113/119 (94%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYK+LFKVVLVGNAGVGKTCLVR+FTQG+FPPGQ ATIGVDFMIKTV++ N++IKLQI
Sbjct: 1 MEDYKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHA++LVYD+SCQP+FDCL +WL EIE YA+ +VL++LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHAIVLVYDVSCQPSFDCLPEWLGEIESYANRRVLKILVG 119
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDRED-REIPTEVGEDF 219
+++V+ C P C +L +E ++N + + NK+D+ D RE+P +G DF
Sbjct: 83 IVLVYDVSCQPSFD----CLPEWLGEIESYANRRVLKILVGNKVDKGDEREVPERIGSDF 138
Query: 220 AK-RHDMYYLETSAKASDNVEKLFMQIAAELMEKL 253
+ H Y+LETSA + NV++LF Q+A L +
Sbjct: 139 SDVNHFDYFLETSALDATNVDQLFEQVATRLTNDM 173
>gi|341878951|gb|EGT34886.1| CBN-RAB-30 protein [Caenorhabditis brenneri]
Length = 215
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 97/119 (81%), Positives = 113/119 (94%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYK+LFKVVLVGNAGVGKTCLVR+FTQG+FPPGQ ATIGVDFMIKTV++ N++IKLQI
Sbjct: 1 MEDYKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHA++LVYD+SCQP+FDCL +WL EIE YA+ +VL++LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHAIVLVYDVSCQPSFDCLPEWLGEIESYANRRVLKILVG 119
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDRED-REIPTEVGEDF 219
+++V+ C P C +L +E ++N + + NK+D+ D RE+P +G DF
Sbjct: 83 IVLVYDVSCQPSFD----CLPEWLGEIESYANRRVLKILVGNKVDKGDEREVPERIGRDF 138
Query: 220 AK-RHDMYYLETSAKASDNVEKLFMQIAAELMEKL 253
+ H Y+LETSA + NV++LF Q+A L +
Sbjct: 139 SDVNHFDYFLETSALDATNVDQLFEQVATRLTNDM 173
>gi|268574762|ref|XP_002642360.1| C. briggsae CBR-RAB-30 protein [Caenorhabditis briggsae]
Length = 215
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 97/119 (81%), Positives = 113/119 (94%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYK+LFKVVLVGNAGVGKTCLVR+FTQG+FPPGQ ATIGVDFMIKTV++ N++IKLQI
Sbjct: 1 MEDYKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHA++LVYD+SCQP+FDCL +WL EIE YA+ +VL++LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHAIVLVYDVSCQPSFDCLPEWLGEIESYANRRVLKILVG 119
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDRED-REIPTEVGEDF 219
+++V+ C P C +L +E ++N + + NK+D+ D RE+P +G DF
Sbjct: 83 IVLVYDVSCQPSFD----CLPEWLGEIESYANRRVLKILVGNKVDKGDEREVPERIGRDF 138
Query: 220 AK-RHDMYYLETSAKASDNVEKLFMQIAAELMEKL 253
+ H Y+LETSA + NV++LF Q+A L +
Sbjct: 139 SDVNHFDYFLETSALDATNVDQLFEQVATRLTNDM 173
>gi|350588341|ref|XP_003129765.3| PREDICTED: ras-related protein Rab-26-like [Sus scrofa]
Length = 298
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 100/122 (81%), Positives = 112/122 (91%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGG 120
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGP 122
Query: 121 TS 122
S
Sbjct: 123 NS 124
>gi|339522341|gb|AEJ84335.1| RAB30 [Capra hircus]
Length = 203
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 99/119 (83%), Positives = 112/119 (94%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY+FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 3 MEDYEFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 121
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 11/83 (13%)
Query: 173 CIPKLARNEACFYLASLEGHSNN--IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLE 229
C+P+ +L +E +++N I + NKID E RE+ + E+F++ DMYYLE
Sbjct: 99 CLPE--------WLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLE 150
Query: 230 TSAKASDNVEKLFMQIAAELMEK 252
TSAK SDNVEKLF+ +A L+ +
Sbjct: 151 TSAKESDNVEKLFLALACRLISE 173
>gi|21361418|ref|NP_055303.2| ras-related protein Rab-30 [Homo sapiens]
gi|31560778|ref|NP_083770.2| ras-related protein Rab-30 [Mus musculus]
gi|115495465|ref|NP_001069697.1| ras-related protein Rab-30 [Bos taurus]
gi|386780907|ref|NP_001248052.1| ras-related protein Rab-30 [Macaca mulatta]
gi|57102328|ref|XP_533993.1| PREDICTED: ras-related protein Rab-30 [Canis lupus familiaris]
gi|114639563|ref|XP_001175176.1| PREDICTED: ras-related protein Rab-30 isoform 7 [Pan troglodytes]
gi|114639565|ref|XP_001175173.1| PREDICTED: ras-related protein Rab-30 isoform 5 [Pan troglodytes]
gi|114639567|ref|XP_001175175.1| PREDICTED: ras-related protein Rab-30 isoform 6 [Pan troglodytes]
gi|114639569|ref|XP_001175170.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Pan troglodytes]
gi|114639571|ref|XP_001175166.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Pan troglodytes]
gi|149719267|ref|XP_001492126.1| PREDICTED: ras-related protein Rab-30-like [Equus caballus]
gi|291384169|ref|XP_002708711.1| PREDICTED: RAB30, member RAS oncogene family [Oryctolagus
cuniculus]
gi|296216937|ref|XP_002754790.1| PREDICTED: ras-related protein Rab-30-like isoform 1 [Callithrix
jacchus]
gi|296216939|ref|XP_002754791.1| PREDICTED: ras-related protein Rab-30-like isoform 2 [Callithrix
jacchus]
gi|296216941|ref|XP_002754792.1| PREDICTED: ras-related protein Rab-30-like isoform 3 [Callithrix
jacchus]
gi|297689849|ref|XP_002822348.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Pongo abelii]
gi|297689851|ref|XP_002822349.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Pongo abelii]
gi|297689853|ref|XP_002822350.1| PREDICTED: ras-related protein Rab-30 isoform 4 [Pongo abelii]
gi|301780042|ref|XP_002925436.1| PREDICTED: ras-related protein Rab-30-like [Ailuropoda melanoleuca]
gi|332211163|ref|XP_003254688.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Nomascus
leucogenys]
gi|332211165|ref|XP_003254689.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Nomascus
leucogenys]
gi|332211167|ref|XP_003254690.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Nomascus
leucogenys]
gi|332211169|ref|XP_003254691.1| PREDICTED: ras-related protein Rab-30 isoform 4 [Nomascus
leucogenys]
gi|348565559|ref|XP_003468570.1| PREDICTED: ras-related protein Rab-30-like [Cavia porcellus]
gi|354489829|ref|XP_003507063.1| PREDICTED: ras-related protein Rab-30-like [Cricetulus griseus]
gi|395743310|ref|XP_003777901.1| PREDICTED: ras-related protein Rab-30 [Pongo abelii]
gi|395814755|ref|XP_003780907.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Otolemur
garnettii]
gi|395814757|ref|XP_003780908.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Otolemur
garnettii]
gi|397502808|ref|XP_003822035.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Pan paniscus]
gi|397502810|ref|XP_003822036.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Pan paniscus]
gi|397502812|ref|XP_003822037.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Pan paniscus]
gi|397502814|ref|XP_003822038.1| PREDICTED: ras-related protein Rab-30 isoform 4 [Pan paniscus]
gi|397502816|ref|XP_003822039.1| PREDICTED: ras-related protein Rab-30 isoform 5 [Pan paniscus]
gi|402894802|ref|XP_003910534.1| PREDICTED: ras-related protein Rab-30 [Papio anubis]
gi|403287762|ref|XP_003935099.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403287764|ref|XP_003935100.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Saimiri
boliviensis boliviensis]
gi|403287766|ref|XP_003935101.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Saimiri
boliviensis boliviensis]
gi|410972563|ref|XP_003992728.1| PREDICTED: ras-related protein Rab-30 [Felis catus]
gi|426251519|ref|XP_004019469.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Ovis aries]
gi|426251521|ref|XP_004019470.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Ovis aries]
gi|426369956|ref|XP_004051946.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Gorilla gorilla
gorilla]
gi|426369958|ref|XP_004051947.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Gorilla gorilla
gorilla]
gi|426369960|ref|XP_004051948.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Gorilla gorilla
gorilla]
gi|426369962|ref|XP_004051949.1| PREDICTED: ras-related protein Rab-30 isoform 4 [Gorilla gorilla
gorilla]
gi|426369964|ref|XP_004051950.1| PREDICTED: ras-related protein Rab-30 isoform 5 [Gorilla gorilla
gorilla]
gi|441645341|ref|XP_004090651.1| PREDICTED: ras-related protein Rab-30 [Nomascus leucogenys]
gi|38258937|sp|Q15771.2|RAB30_HUMAN RecName: Full=Ras-related protein Rab-30; Flags: Precursor
gi|68652043|sp|Q923S9.1|RAB30_MOUSE RecName: Full=Ras-related protein Rab-30; Flags: Precursor
gi|116255980|sp|Q17QB7.1|RAB30_BOVIN RecName: Full=Ras-related protein Rab-30; Flags: Precursor
gi|15277920|gb|AAK94019.1|AF399756_1 RAB30 [Mus musculus]
gi|20379088|gb|AAM21104.1|AF498956_1 small GTP binding protein RAB30 [Homo sapiens]
gi|15559714|gb|AAH14213.1| RAB30, member RAS oncogene family [Homo sapiens]
gi|17028460|gb|AAH17550.1| RAB30, member RAS oncogene family [Mus musculus]
gi|49457208|emb|CAG46903.1| RAB30 [Homo sapiens]
gi|60814713|gb|AAX36314.1| RAB30 member RAS oncogene family [synthetic construct]
gi|74209184|dbj|BAE24976.1| unnamed protein product [Mus musculus]
gi|109659234|gb|AAI18449.1| RAB30, member RAS oncogene family [Bos taurus]
gi|112293021|dbj|BAF02888.1| Rab30 [Mus musculus]
gi|119595484|gb|EAW75078.1| RAB30, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595485|gb|EAW75079.1| RAB30, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595486|gb|EAW75080.1| RAB30, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595487|gb|EAW75081.1| RAB30, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123984423|gb|ABM83557.1| RAB30, member RAS oncogene family [synthetic construct]
gi|123998391|gb|ABM86797.1| RAB30, member RAS oncogene family [synthetic construct]
gi|148674775|gb|EDL06722.1| RAB30, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148674776|gb|EDL06723.1| RAB30, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149068963|gb|EDM18515.1| RAB30, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149068964|gb|EDM18516.1| RAB30, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|157928438|gb|ABW03515.1| RAB30, member RAS oncogene family [synthetic construct]
gi|158256188|dbj|BAF84065.1| unnamed protein product [Homo sapiens]
gi|189065406|dbj|BAG35245.1| unnamed protein product [Homo sapiens]
gi|261860434|dbj|BAI46739.1| RAB30, member RAS oncogene family [synthetic construct]
gi|281339635|gb|EFB15219.1| hypothetical protein PANDA_014945 [Ailuropoda melanoleuca]
gi|296471922|tpg|DAA14037.1| TPA: RAB30, member RAS oncogene family [Bos taurus]
gi|335773338|gb|AEH58359.1| Ras-related protein Rab-30-like protein [Equus caballus]
gi|351696042|gb|EHA98960.1| Ras-related protein Rab-30 [Heterocephalus glaber]
gi|355566910|gb|EHH23289.1| hypothetical protein EGK_06727 [Macaca mulatta]
gi|355752502|gb|EHH56622.1| hypothetical protein EGM_06073 [Macaca fascicularis]
gi|380811820|gb|AFE77785.1| ras-related protein Rab-30 [Macaca mulatta]
gi|384946490|gb|AFI36850.1| ras-related protein Rab-30 [Macaca mulatta]
gi|410206854|gb|JAA00646.1| RAB30, member RAS oncogene family [Pan troglodytes]
gi|410254834|gb|JAA15384.1| RAB30, member RAS oncogene family [Pan troglodytes]
gi|410290492|gb|JAA23846.1| RAB30, member RAS oncogene family [Pan troglodytes]
gi|410329963|gb|JAA33928.1| RAB30, member RAS oncogene family [Pan troglodytes]
gi|417397027|gb|JAA45547.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
gi|431838480|gb|ELK00412.1| Ras-related protein Rab-30 [Pteropus alecto]
gi|440906949|gb|ELR57158.1| Ras-related protein Rab-30 [Bos grunniens mutus]
Length = 203
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 99/119 (83%), Positives = 111/119 (93%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 121
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 11/83 (13%)
Query: 173 CIPKLARNEACFYLASLEGHSNN--IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLE 229
C+P+ +L +E +++N I + NKID E RE+ + E+F++ DMYYLE
Sbjct: 99 CLPE--------WLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLE 150
Query: 230 TSAKASDNVEKLFMQIAAELMEK 252
TSAK SDNVEKLF+ +A L+ +
Sbjct: 151 TSAKESDNVEKLFLDLACRLISE 173
>gi|170574453|ref|XP_001892820.1| Ras-related protein Rab-30 [Brugia malayi]
gi|158601425|gb|EDP38340.1| Ras-related protein Rab-30, putative [Brugia malayi]
Length = 197
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 95/119 (79%), Positives = 115/119 (96%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYK+LFKVVLVGNAGVGKTCLVR+FTQG+FPPGQ ATIGVDFMIKTV++++++IKLQI
Sbjct: 1 MEDYKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVDDDKIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHA++LVYD++CQP+FDCL +WL EIE+YA+ +VL++LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHAIVLVYDVACQPSFDCLPEWLGEIEQYANRRVLKILVG 119
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDRED-REIPTEVGEDF 219
+++V+ C P C +L +E ++N + + NKID+ED RE+P +G++F
Sbjct: 83 IVLVYDVACQPSFD----CLPEWLGEIEQYANRRVLKILVGNKIDKEDEREVPERIGKNF 138
Query: 220 AKRHDM-YYLETSAKASDNVEKLFMQIAAELMEKL 253
A + Y+LETSA + NV+ LF ++A L +
Sbjct: 139 ADANAFDYFLETSALDATNVDTLFHEVATRLTNDM 173
>gi|224043682|ref|XP_002187756.1| PREDICTED: ras-related protein Rab-30 [Taeniopygia guttata]
gi|363729400|ref|XP_417213.3| PREDICTED: ras-related protein Rab-30 [Gallus gallus]
gi|449271458|gb|EMC81819.1| Ras-related protein Rab-30 [Columba livia]
Length = 203
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 99/119 (83%), Positives = 111/119 (93%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 121
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 11/83 (13%)
Query: 173 CIPKLARNEACFYLASLEGHSNN--IHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLE 229
C+P+ +L +E +++N I + NKID D RE+ + +F++ DMYYLE
Sbjct: 99 CLPE--------WLREIEQYASNKVITVLVGNKIDLADKREVSQQRAAEFSEAQDMYYLE 150
Query: 230 TSAKASDNVEKLFMQIAAELMEK 252
TSAK SDNVEKLF+ +A L+ +
Sbjct: 151 TSAKESDNVEKLFLDLACRLISE 173
>gi|83754993|pdb|2EW1|A Chain A, Crystal Structure Of Rab30 In Complex With A Gtp Analogue
Length = 201
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 99/119 (83%), Positives = 111/119 (93%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 20 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 79
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 80 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 138
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 11/81 (13%)
Query: 173 CIPKLARNEACFYLASLEGHSNN--IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLE 229
C+P+ +L +E +++N I + NKID E RE+ + E+F++ DMYYLE
Sbjct: 116 CLPE--------WLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLE 167
Query: 230 TSAKASDNVEKLFMQIAAELM 250
TSAK SDNVEKLF+ +A L+
Sbjct: 168 TSAKESDNVEKLFLDLACRLI 188
>gi|432102772|gb|ELK30248.1| Ras-related protein Rab-30 [Myotis davidii]
Length = 203
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 99/119 (83%), Positives = 111/119 (93%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 121
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 11/81 (13%)
Query: 173 CIPKLARNEACFYLASLEGHSNN--IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLE 229
C+P+ +L +E +++N I + NKID E RE+ + E+F++ DMYYLE
Sbjct: 99 CLPE--------WLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLE 150
Query: 230 TSAKASDNVEKLFMQIAAELM 250
TSAK SDNVEKLF+ +A L+
Sbjct: 151 TSAKESDNVEKLFLDLACRLI 171
>gi|334327772|ref|XP_001377113.2| PREDICTED: ras-related protein Rab-30-like [Monodelphis domestica]
gi|395521092|ref|XP_003764654.1| PREDICTED: ras-related protein Rab-30 [Sarcophilus harrisii]
Length = 203
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 99/119 (83%), Positives = 111/119 (93%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 121
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 11/83 (13%)
Query: 173 CIPKLARNEACFYLASLEGHSNN--IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLE 229
C+P+ +L +E +++N I + NKID E RE+ + E+F++ DMYYLE
Sbjct: 99 CLPE--------WLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLE 150
Query: 230 TSAKASDNVEKLFMQIAAELMEK 252
TSAK SDNVEKLF+ +A L+ +
Sbjct: 151 TSAKESDNVEKLFLDLACRLISE 173
>gi|327269229|ref|XP_003219397.1| PREDICTED: ras-related protein Rab-30-like [Anolis carolinensis]
Length = 203
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 99/119 (83%), Positives = 111/119 (93%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 121
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 11/81 (13%)
Query: 173 CIPKLARNEACFYLASLEGHSNN--IHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLE 229
C+P+ +L +E +++N I + NKID D RE+ + E+F++ DMYYLE
Sbjct: 99 CLPE--------WLREIEQYASNKVITVLVGNKIDLADKREVSQQRAEEFSEAQDMYYLE 150
Query: 230 TSAKASDNVEKLFMQIAAELM 250
TSAK SDNVEKLF+ +A L+
Sbjct: 151 TSAKESDNVEKLFLDLACRLI 171
>gi|402591009|gb|EJW84939.1| hypothetical protein WUBG_04149 [Wuchereria bancrofti]
Length = 193
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 95/119 (79%), Positives = 115/119 (96%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYK+LFKVVLVGNAGVGKTCLVR+FTQG+FPPGQ ATIGVDFMIKTV++++++IKLQI
Sbjct: 1 MEDYKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVDDDKIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHA++LVYD++CQP+FDCL +WL EIE+YA+ +VL++LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHAIVLVYDVACQPSFDCLPEWLGEIEQYANRRVLKILVG 119
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDRED-REIPTEVGEDF 219
+++V+ C P C +L +E ++N + + NKID+ED RE+P +G++F
Sbjct: 83 IVLVYDVACQPSFD----CLPEWLGEIEQYANRRVLKILVGNKIDKEDEREVPERIGKNF 138
Query: 220 AKRHDM-YYLETSAKASDNVEKLFMQIAAELMEKL 253
A + Y+LETSA + NV+ LF ++A L +
Sbjct: 139 ADANAFDYFLETSALDATNVDTLFHEVATRLTNDM 173
>gi|399163167|gb|AFP33159.1| rab-30, partial [Caenorhabditis elegans]
Length = 215
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 96/118 (81%), Positives = 112/118 (94%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
EDYK+LFKVVLVGNAGVGKTCLVR+FTQG+FPPGQ ATIGVDFMIKTV++ N++IKLQIW
Sbjct: 1 EDYKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIW 60
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQERFRSITQSYYRSAHA++LVYD+SCQP+FDCL +WL EIE YA+ +VL++LVG
Sbjct: 61 DTAGQERFRSITQSYYRSAHAIVLVYDVSCQPSFDCLPEWLGEIESYANRRVLKILVG 118
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 12/100 (12%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDRED-REIPTEVGEDF 219
+++V+ C P C +L +E ++N + + NK+D+ D RE+P +G DF
Sbjct: 82 IVLVYDVSCQPSFD----CLPEWLGEIESYANRRVLKILVGNKVDKGDEREVPERIGRDF 137
Query: 220 AKRHDM-YYLETSAKASDNVEKLFMQIAAELMEKLAEKLT 258
+ + Y+LETSA + NV++LF Q+A L + KLT
Sbjct: 138 SDVNQFDYFLETSALDATNVDQLFEQVATRLTNDM--KLT 175
>gi|344240431|gb|EGV96534.1| Ras-related protein Rab-30 [Cricetulus griseus]
Length = 201
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 99/119 (83%), Positives = 111/119 (93%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 1 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 61 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 119
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 11/83 (13%)
Query: 173 CIPKLARNEACFYLASLEGHSNN--IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLE 229
C+P+ +L +E +++N I + NKID E RE+ + E+F++ DMYYLE
Sbjct: 97 CLPE--------WLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLE 148
Query: 230 TSAKASDNVEKLFMQIAAELMEK 252
TSAK SDNVEKLF+ +A L+ +
Sbjct: 149 TSAKESDNVEKLFLDLACRLISE 171
>gi|326914544|ref|XP_003203585.1| PREDICTED: ras-related protein Rab-30-like [Meleagris gallopavo]
Length = 203
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 99/119 (83%), Positives = 111/119 (93%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 121
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 11/81 (13%)
Query: 173 CIPKLARNEACFYLASLEGHSNN--IHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLE 229
C+P+ +L +E +++N I + NKID D RE+ + +F++ DMYYLE
Sbjct: 99 CLPE--------WLREIEQYASNKVITVLVGNKIDLADKREVSQQRAAEFSEAQDMYYLE 150
Query: 230 TSAKASDNVEKLFMQIAAELM 250
TSAK SDNVEKLF+ +A L+
Sbjct: 151 TSAKESDNVEKLFLDLACRLI 171
>gi|324523422|gb|ADY48248.1| Ras-related protein Rab-30 [Ascaris suum]
Length = 209
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 95/119 (79%), Positives = 113/119 (94%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYK+LFKVVLVGNAGVGKTCLVR+FTQG+FPPGQ ATIGVDFMIKTV++ ++IKLQI
Sbjct: 1 MEDYKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGEDKIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHA++LVYD++CQP+FDCL +WL EIE+YA+ +VL++LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHAIVLVYDVACQPSFDCLPEWLGEIEQYANRRVLKILVG 119
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDRED-REIPTEVGEDF 219
+++V+ C P C +L +E ++N + + NK+D+ED REIP +G++F
Sbjct: 83 IVLVYDVACQPSFD----CLPEWLGEIEQYANRRVLKILVGNKVDKEDEREIPERIGKNF 138
Query: 220 AKRHDM-YYLETSAKASDNVEKLFMQIAAELMEKL 253
A + Y+LETSA + NV+ LF ++A L +
Sbjct: 139 ADANAFDYFLETSALDATNVDTLFQEVATRLTSDM 173
>gi|443730169|gb|ELU15795.1| hypothetical protein CAPTEDRAFT_228503 [Capitella teleta]
Length = 1128
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/170 (62%), Positives = 132/170 (77%), Gaps = 2/170 (1%)
Query: 385 AQIASRRKKDKNNK-KILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQ 443
AQ +R+K +K + +I+ E KPG ES RK REE T MDKLHMALTELC+AINYC+ I+
Sbjct: 642 AQSVNRKKNNKEKRNRIIQEPDKPGTESLRKHREEFTRMDKLHMALTELCYAINYCSVIR 701
Query: 444 VWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENY 503
VWD F PRE+ QHLE+RF++ALVGM+M+N +T EIAKPSELL SVRA +N+LQ++ENY
Sbjct: 702 VWDHGFVPREFFTQHLEARFNKALVGMMMYNQETQEIAKPSELLNSVRAVINILQSIENY 761
Query: 504 VHIDMTRVFNNALLQQTQRMDS-HGEKTVAALYIQWYSEVLLRRVSETQV 552
VHID++RVFN+ L QQTQ DS GEKT+ Y QWY EVLLRRVS +
Sbjct: 762 VHIDISRVFNSVLPQQTQPTDSFSGEKTITFNYTQWYLEVLLRRVSAGHI 811
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 93/126 (73%), Gaps = 8/126 (6%)
Query: 549 ETQ--VKSLNLLNFLR-----VYTVENYVHIDMTRVFNNALLQQTQRMDS-HGEKTVAAL 600
ETQ K LLN +R + ++ENYVHID++RVFN+ L QQTQ DS GEKT+
Sbjct: 734 ETQEIAKPSELLNSVRAVINILQSIENYVHIDISRVFNSVLPQQTQPTDSFSGEKTITFN 793
Query: 601 YIQWYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYG 660
Y QWY EVLLRRVSAG+I +S +AFVSL EG +PFNAEE++D+ ELR+LA+LIGPYG
Sbjct: 794 YTQWYLEVLLRRVSAGHIVYSPVHKAFVSLQTEGQLPFNAEEYADLVELRSLAELIGPYG 853
Query: 661 MKLLNE 666
MK L+E
Sbjct: 854 MKYLSE 859
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 79/97 (81%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+K+AEKL I++DRGVGMLTRIYNIKK G +SKP+FLSDKSLE IK I++KFP ID K
Sbjct: 10 QKMAEKLIILNDRGVGMLTRIYNIKKMLGSPESKPAFLSDKSLEPVIKNIIRKFPTIDAK 69
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
S ++ I+ I+S+I++SLSLYYYTFVD++ F+D V
Sbjct: 70 SSSSQINAITPIKSEIIRSLSLYYYTFVDIMDFRDHV 106
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 60/76 (78%)
Query: 126 IVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEACFY 185
IVNEMASAAGL C +DPAL AL + ++ ED + +ACLLMVF+AV IPKLAR++ FY
Sbjct: 960 IVNEMASAAGLPCDIDPALCAALRPQRAEMGEDGYNVACLLMVFIAVAIPKLARSDFAFY 1019
Query: 186 LASLEGHSNNIHCMAR 201
A+LEGH+NNIHC+ +
Sbjct: 1020 KANLEGHANNIHCLGK 1035
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYG--MKLLNELS-----LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R DL+ Y M LL+ + L FN AHE+++ +++ +FPRLGQMI+DY+ PMK
Sbjct: 130 RGYLDLVCNYASLMILLSRVDDRKAVLGLFNFAHELLNGKAEESFPRLGQMIIDYDPPMK 189
Query: 703 KLSEEFIPH 711
KL+EEFIPH
Sbjct: 190 KLTEEFIPH 198
>gi|1457956|gb|AAC50774.1| Rab30 [Homo sapiens]
Length = 203
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 98/119 (82%), Positives = 110/119 (92%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGV FMIKTVEIN E++KLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVGFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 121
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 11/83 (13%)
Query: 173 CIPKLARNEACFYLASLEGHSNN--IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLE 229
C+P+ +L +E +++N I + NKID E RE+ + E+F++ DMYYLE
Sbjct: 99 CLPE--------WLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLE 150
Query: 230 TSAKASDNVEKLFMQIAAELMEK 252
TSAK SDNVEKLF+ +A L+ +
Sbjct: 151 TSAKESDNVEKLFLDLACRLISE 173
>gi|260781612|ref|XP_002585899.1| hypothetical protein BRAFLDRAFT_62895 [Branchiostoma floridae]
gi|260812193|ref|XP_002600805.1| hypothetical protein BRAFLDRAFT_95095 [Branchiostoma floridae]
gi|229270964|gb|EEN41910.1| hypothetical protein BRAFLDRAFT_62895 [Branchiostoma floridae]
gi|229286095|gb|EEN56817.1| hypothetical protein BRAFLDRAFT_95095 [Branchiostoma floridae]
Length = 206
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 98/136 (72%), Positives = 118/136 (86%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTV+++ +++KLQI
Sbjct: 1 MEDYKFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVDVDGDKVKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGG 120
WDTAGQERFRSITQSYYRSAHALILVYD++ + +FDCL +WL+EIE+YA+ +V+ VLVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVYDVTSRESFDCLPEWLKEIEQYANQQVITVLVGN 120
Query: 121 TSGLKIVNEMASAAGL 136
L E+ GL
Sbjct: 121 KIDLTSQREVPPETGL 136
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 11/80 (13%)
Query: 173 CIPKLARNEACFYLASLEGHSNN--IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLE 229
C+P+ +L +E ++N I + NKID RE+P E G FA+ ++M +LE
Sbjct: 97 CLPE--------WLKEIEQYANQQVITVLVGNKIDLTSQREVPPETGLQFAQANNMAFLE 148
Query: 230 TSAKASDNVEKLFMQIAAEL 249
SAK ++NVE +FM +A EL
Sbjct: 149 ASAKEAENVETVFMDLAREL 168
>gi|147902880|ref|NP_001085176.1| RAB30, member RAS oncogene family [Xenopus laevis]
gi|47937791|gb|AAH72360.1| MGC83515 protein [Xenopus laevis]
Length = 203
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 98/119 (82%), Positives = 110/119 (92%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEI E+IKLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGEKIKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS +V+ VLVG
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASSEVITVLVG 121
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 11/83 (13%)
Query: 173 CIPKLARNEACFYLASLEGHSNN--IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLE 229
C+P+ +L +E ++++ I + NKID E RE+ + E+FA +MYYLE
Sbjct: 99 CLPE--------WLREIEQYASSEVITVLVGNKIDLAERREVSQQRAEEFAGTQNMYYLE 150
Query: 230 TSAKASDNVEKLFMQIAAELMEK 252
TSAK SDNVEKLF+ +A L+ +
Sbjct: 151 TSAKESDNVEKLFLDLACRLISE 173
>gi|12856302|dbj|BAB30625.1| unnamed protein product [Mus musculus]
Length = 203
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 98/119 (82%), Positives = 110/119 (92%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTA QERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 63 WDTAVQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 121
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 11/83 (13%)
Query: 173 CIPKLARNEACFYLASLEGHSNN--IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLE 229
C+P+ +L +E +++N I + NKID E RE+ + E+F++ DMYYLE
Sbjct: 99 CLPE--------WLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLE 150
Query: 230 TSAKASDNVEKLFMQIAAELMEK 252
TSAK SDNVEKLF+ +A L+ +
Sbjct: 151 TSAKESDNVEKLFLDLACRLISE 173
>gi|344293727|ref|XP_003418572.1| PREDICTED: ras-related protein Rab-30-like [Loxodonta africana]
Length = 205
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/117 (82%), Positives = 109/117 (93%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQIWD
Sbjct: 7 DYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 67 TAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 123
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 11/83 (13%)
Query: 173 CIPKLARNEACFYLASLEGHSNN--IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLE 229
C+P+ +L +E +++N I + NKID E RE+ + E+F++ DMYYLE
Sbjct: 101 CLPE--------WLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLE 152
Query: 230 TSAKASDNVEKLFMQIAAELMEK 252
TSAK SDNVEKLF+ +A L+ +
Sbjct: 153 TSAKESDNVEKLFLDLACRLISE 175
>gi|54606871|ref|NP_001006108.1| RAB30, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|49250515|gb|AAH74609.1| RAB30, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 203
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 97/119 (81%), Positives = 110/119 (92%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEI E+IKLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGEKIKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YA+ +V+ VLVG
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYANSEVITVLVG 121
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 11/83 (13%)
Query: 173 CIPKLARNEACFYLASLEGHSNN--IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLE 229
C+P+ +L +E ++N+ I + NKID E RE+ + E+FA +MYYLE
Sbjct: 99 CLPE--------WLREIEQYANSEVITVLVGNKIDLAERREVSQQRAEEFAGTQNMYYLE 150
Query: 230 TSAKASDNVEKLFMQIAAELMEK 252
TSAK SDNVEKLF+ +A L+ +
Sbjct: 151 TSAKESDNVEKLFLDLACRLISE 173
>gi|34365467|emb|CAE46061.1| hypothetical protein [Homo sapiens]
Length = 164
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/125 (79%), Positives = 112/125 (89%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGG 120
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VL
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLATR 122
Query: 121 TSGLK 125
+ LK
Sbjct: 123 LTWLK 127
>gi|410910458|ref|XP_003968707.1| PREDICTED: ras-related protein Rab-30-like [Takifugu rubripes]
Length = 203
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 94/119 (78%), Positives = 110/119 (92%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY +LFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEI E++KLQI
Sbjct: 3 MEDYDYLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YA+ +V+ +LVG
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEDSFRCLPEWLREIEQYANNQVVTILVG 121
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 11/81 (13%)
Query: 173 CIPKLARNEACFYLASLEGHSNN--IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLE 229
C+P+ +L +E ++NN + + NKID E RE+ + EDFA+ M YLE
Sbjct: 99 CLPE--------WLREIEQYANNQVVTILVGNKIDLAEKREVVRQRAEDFAQSQSMLYLE 150
Query: 230 TSAKASDNVEKLFMQIAAELM 250
TSAK SDNVEKLF+ +A EL+
Sbjct: 151 TSAKESDNVEKLFLDLACELI 171
>gi|348525384|ref|XP_003450202.1| PREDICTED: ras-related protein Rab-30-like [Oreochromis niloticus]
Length = 203
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 94/119 (78%), Positives = 110/119 (92%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY +LFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEI E++KLQI
Sbjct: 3 MEDYDYLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YA+ +V+ +LVG
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEDSFRCLPEWLREIEQYANNQVVTILVG 121
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 11/81 (13%)
Query: 173 CIPKLARNEACFYLASLEGHSNN--IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLE 229
C+P+ +L +E ++NN + + NKID E RE+ + EDFA+ M YLE
Sbjct: 99 CLPE--------WLREIEQYANNQVVTILVGNKIDLAEKREVLRQRAEDFAEAQSMLYLE 150
Query: 230 TSAKASDNVEKLFMQIAAELM 250
TSAK SDNVEKLF+ +A EL+
Sbjct: 151 TSAKESDNVEKLFLDLACELI 171
>gi|432889723|ref|XP_004075330.1| PREDICTED: ras-related protein Rab-30-like [Oryzias latipes]
Length = 203
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 94/119 (78%), Positives = 110/119 (92%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY +LFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEI E++KLQI
Sbjct: 3 MEDYDYLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YA+ +V+ +LVG
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEDSFRCLPEWLREIEQYANNQVVTILVG 121
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 11/81 (13%)
Query: 173 CIPKLARNEACFYLASLEGHSNN--IHCMARNKIDR-EDREIPTEVGEDFAKRHDMYYLE 229
C+P+ +L +E ++NN + + NKID E RE+ + EDFA+ M YLE
Sbjct: 99 CLPE--------WLREIEQYANNQVVTILVGNKIDLVEKREVLRQRAEDFAEAQSMLYLE 150
Query: 230 TSAKASDNVEKLFMQIAAELM 250
TSAK SDNVEKLF+ +A EL+
Sbjct: 151 TSAKESDNVEKLFLDLACELI 171
>gi|391330948|ref|XP_003739913.1| PREDICTED: membrane-associated protein Hem-like [Metaseiulus
occidentalis]
Length = 1141
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/171 (60%), Positives = 135/171 (78%), Gaps = 3/171 (1%)
Query: 385 AQIASRRKKDKNNKK---ILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTN 441
AQ+ RRK+DK + K + E +PG ESYR+TR EL+TMDKLHMALTE+C+AINYC
Sbjct: 646 AQMVQRRKRDKKSNKNGPPIPEPEEPGIESYRRTRLELSTMDKLHMALTEVCYAINYCPT 705
Query: 442 IQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVE 501
+ +W+ TFAPREYL HLE+RF++ALVGMVMF+ ++ +IAKP+ELL+SVRAYM+VLQ +E
Sbjct: 706 MTIWEHTFAPREYLANHLETRFAKALVGMVMFDSESGDIAKPTELLSSVRAYMSVLQGIE 765
Query: 502 NYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
N V ID+TRVFN+ LLQQTQ D +G+KT+ +LY WY EVLLRR + +
Sbjct: 766 NVVSIDITRVFNHVLLQQTQTQDRNGDKTITSLYTTWYLEVLLRRATAGHI 816
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/105 (73%), Positives = 86/105 (81%), Gaps = 5/105 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+K AEKLTI++DRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLES IK IV++FPN+DIK
Sbjct: 10 QKFAEKLTILNDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESSIKHIVRRFPNVDIK 69
Query: 311 SVSG----ISQIRSDIVKSLSLYYYTFVDLLHFKDCVY-LSGHFD 350
S + QI+ +IVKSLSLYYYTFVDLL FKD V L H D
Sbjct: 70 GSSAQLTPVFQIKQEIVKSLSLYYYTFVDLLDFKDHVNDLLTHLD 114
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/119 (57%), Positives = 89/119 (74%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVYT-----VENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL+ +R Y +EN V ID+TRVFN+ LLQQTQ D +G+KT+ +LY WY E
Sbjct: 746 KPTELLSSVRAYMSVLQGIENVVSIDITRVFNHVLLQQTQTQDRNGDKTITSLYTTWYLE 805
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
VLLRR +AG+I FS QR+FV+++ + IP+ AEE+SDVNELRALA+L+GPYG+K LNE
Sbjct: 806 VLLRRATAGHIVFSPFQRSFVTISQDPQIPYTAEEYSDVNELRALAELLGPYGIKHLNE 864
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Query: 127 VNEMASAAGLLCTVDPALATALAS-DKTDLDEDEHVLACLLMVFVAVCIPKLARNEACFY 185
V+EMA +AGL C VDPAL AL K + ++E+ +ACLLMVF+AV +P+LAR+EA Y
Sbjct: 968 VSEMAVSAGLKCRVDPALVQALRQYGKNESPDEEYQMACLLMVFLAVALPRLARSEASLY 1027
Query: 186 LASLEGHSNNIHCMAR 201
SLE H NNIHC+A+
Sbjct: 1028 RPSLESHQNNIHCLAQ 1043
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 9/73 (12%)
Query: 650 RALADLIGPYGMKLLNELS--------LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPM 701
+A DLI Y + LL LS L FNAA+E++H Q D +FPRLGQMI+DY+ P+
Sbjct: 130 KAYLDLITTY-VSLLILLSRVEDRKAVLGLFNAAYEIIHGQCDQSFPRLGQMIVDYDPPL 188
Query: 702 KKLSEEFIPHDSM 714
KKL++EF+PH M
Sbjct: 189 KKLADEFVPHSKM 201
>gi|339243319|ref|XP_003377585.1| GTP-binding protein YPT1 [Trichinella spiralis]
gi|316973603|gb|EFV57170.1| GTP-binding protein YPT1 [Trichinella spiralis]
Length = 219
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 95/135 (70%), Positives = 118/135 (87%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYK+LFKVVL+GNAGVGKTCLVR+FTQGVFPPGQ ATIGVDFMIKT+ ++ +++KLQI
Sbjct: 1 MEDYKYLFKVVLIGNAGVGKTCLVRKFTQGVFPPGQTATIGVDFMIKTLLVDGDKVKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGG 120
WDTAGQERFRSITQSYYRSAHA+ILVYD++CQPTFD L +W+ E+E+YA+ K+L++LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHAIILVYDVACQPTFDRLPEWIVEMEQYANQKILKILVGN 120
Query: 121 TSGLKIVNEMASAAG 135
S + E+ + G
Sbjct: 121 KSDKEEEREIPTIIG 135
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 58/93 (62%), Gaps = 6/93 (6%)
Query: 165 LLMVFVAVCIPKLARNEACFYLASLEGHSNN--IHCMARNKIDRED-REIPTEVGEDFAK 221
+++V+ C P R ++ +E ++N + + NK D+E+ REIPT +G++FA+
Sbjct: 83 IILVYDVACQPTFDRLPE--WIVEMEQYANQKILKILVGNKSDKEEEREIPTIIGQEFAE 140
Query: 222 RHDM-YYLETSAKASDNVEKLFMQIAAELMEKL 253
R+ Y+LETSA S NVE+LF ++A L+ ++
Sbjct: 141 RNGFDYFLETSALRSTNVEQLFFEVAGRLIREM 173
>gi|62531004|gb|AAH92610.1| Nckap1 protein, partial [Rattus norvegicus]
Length = 477
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 8 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMAVWEHTFTPREYLTSHLEIRFTK 67
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 68 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 127
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 128 HGEPTITSLYTNWYLETLLRQVSNGHI 154
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 84 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 143
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 144 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 202
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 307 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 366
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 367 YSPAIEGHCNNIHCLAK 383
>gi|57526504|ref|NP_001002750.1| ras-related protein Rab-30 [Danio rerio]
gi|49901476|gb|AAH76437.1| RAB30, member RAS oncogene family [Danio rerio]
Length = 201
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 93/119 (78%), Positives = 109/119 (91%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY +LFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEI ++KLQI
Sbjct: 1 MEDYDYLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGVKVKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YA+ +V+ +LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSANALILTYDITCEDSFRCLPEWLREIEQYANNQVVTILVG 119
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 11/81 (13%)
Query: 173 CIPKLARNEACFYLASLEGHSNN--IHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLE 229
C+P+ +L +E ++NN + + NKID D RE+ + E+FA M YLE
Sbjct: 97 CLPE--------WLREIEQYANNQVVTILVGNKIDLADKREVLRQRAEEFADSQSMLYLE 148
Query: 230 TSAKASDNVEKLFMQIAAELM 250
TSAK SDNVEKLF+ +A EL+
Sbjct: 149 TSAKESDNVEKLFLDLACELI 169
>gi|212549761|ref|NP_001131137.1| nck-associated protein 1 [Danio rerio]
Length = 1124
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 657 KPGVESMRKNRLLVTNLDKLHTALSELCFSINYVPNMMVWEHTFTPREYLTSHLEIRFTK 716
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 717 SIVGMTMYNQTTQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 776
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 777 HGEPTITSLYTNWYLETLLRQVSNGHI 803
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 733 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 792
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 793 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 851
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 82/95 (86%), Gaps = 2/95 (2%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRG+GMLTRIYNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGIGMLTRIYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 --SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 105
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 55/75 (73%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEACFYL 186
V E++SAAGL C +DPAL AL+S K+ E+E+ +ACLLMVFVAV +P LA N Y
Sbjct: 956 VYELSSAAGLPCEIDPALVVALSSQKSGNPEEEYKIACLLMVFVAVSMPTLASNVMSQYS 1015
Query: 187 ASLEGHSNNIHCMAR 201
++EGH NNIHC+A+
Sbjct: 1016 PAIEGHCNNIHCLAK 1030
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 158 YNYAHEMTHGSSDREYPRLGQMIVDYENPLKKMMEEFVPH 197
>gi|224493149|sp|B0S6R1.1|NCKP1_DANRE RecName: Full=Nck-associated protein 1; Short=NAP 1
Length = 1128
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 659 KPGVESMRKNRLLVTNLDKLHTALSELCFSINYVPNMMVWEHTFTPREYLTSHLEIRFTK 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 719 SIVGMTMYNQTTQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 779 HGEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 735 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 795 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 853
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRG+GMLTRIYNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGIGMLTRIYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSMPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYAHEMTHGSSDREYPRLGQMIVDYENPLKKMMEEFVPH 199
>gi|81294294|gb|AAI07936.1| Nckap1 protein [Rattus norvegicus]
Length = 680
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/143 (66%), Positives = 113/143 (79%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 211 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMAVWEHTFTPREYLTSHLEIRFTK 270
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 271 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 330
Query: 526 HGEKTVAALYIQWYSEVLLRRVS 548
HGE T+ +LY WY E LLR+VS
Sbjct: 331 HGEPTITSLYTNWYLETLLRQVS 353
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 86/119 (72%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 287 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 346
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 347 TLLRQVSNGYIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 405
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 510 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 569
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 570 YSPAIEGHCNNIHCLAK 586
>gi|326922433|ref|XP_003207453.1| PREDICTED: nck-associated protein 1-like, partial [Meleagris
gallopavo]
Length = 541
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 72 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 131
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 132 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 191
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 192 HGEPTITSLYTNWYLETLLRQVSNGHI 218
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 148 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 207
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+RAL++L+GPYGMK L+E
Sbjct: 208 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRALSELLGPYGMKFLSE 266
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 371 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 430
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 431 YSPAIEGHCNNIHCLAK 447
>gi|158138549|ref|NP_113806.1| nck-associated protein 1 [Rattus norvegicus]
gi|149022388|gb|EDL79282.1| NCK-associated protein 1, isoform CRA_b [Rattus norvegicus]
Length = 1128
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 659 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMAVWEHTFTPREYLTSHLEIRFTK 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 719 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 779 HGEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 735 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 795 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 853
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYAHEMTHGASDREYPRLGQMIVDYEHPLKKMMEEFVPH 199
>gi|126326401|ref|XP_001369107.1| PREDICTED: nck-associated protein 1 isoform 2 [Monodelphis
domestica]
Length = 1128
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 659 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMAVWEHTFTPREYLTSHLEIRFTK 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 719 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 779 HGEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 735 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 795 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 853
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRG+GMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGIGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 199
>gi|28395023|ref|NP_058661.1| nck-associated protein 1 [Mus musculus]
gi|82592512|sp|P28660.2|NCKP1_MOUSE RecName: Full=Nck-associated protein 1; Short=NAP 1; AltName:
Full=Brain protein H19; AltName: Full=MH19; AltName:
Full=Membrane-associated protein HEM-2; AltName:
Full=p125Nap1
gi|26986194|emb|CAD58932.1| Nck-associated protein 1 [Mus musculus]
gi|148695316|gb|EDL27263.1| NCK-associated protein 1 [Mus musculus]
gi|151555179|gb|AAI48378.1| NCK-associated protein 1 [synthetic construct]
Length = 1128
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 659 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMAVWEHTFTPREYLTSHLEIRFTK 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 719 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 779 HGEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 735 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 795 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 853
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 199
>gi|149022387|gb|EDL79281.1| NCK-associated protein 1, isoform CRA_a [Rattus norvegicus]
Length = 1134
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 665 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMAVWEHTFTPREYLTSHLEIRFTK 724
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 725 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 784
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 785 HGEPTITSLYTNWYLETLLRQVSNGHI 811
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 741 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 800
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 801 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 859
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 82/103 (79%), Gaps = 10/103 (9%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKK------ACGDAKSKPSFLSDKSLESCIKQIVKKF 304
+KLAEKLTI++DRGVGMLTR+YNIKK ACGD K+KPS+L DK+LES +K IV+KF
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKQGQVWKACGDPKAKPSYLIDKNLESAVKFIVRKF 70
Query: 305 PNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
P ++ ++ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 PAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 113
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 964 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1023
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1024 YSPAIEGHCNNIHCLAK 1040
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 166 YNYAHEMTHGASDREYPRLGQMIVDYEHPLKKMMEEFVPH 205
>gi|126326399|ref|XP_001369085.1| PREDICTED: nck-associated protein 1 isoform 1 [Monodelphis
domestica]
Length = 1134
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 665 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMAVWEHTFTPREYLTSHLEIRFTK 724
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 725 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 784
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 785 HGEPTITSLYTNWYLETLLRQVSNGHI 811
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 741 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 800
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 801 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 859
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 82/103 (79%), Gaps = 10/103 (9%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKK------ACGDAKSKPSFLSDKSLESCIKQIVKKF 304
+KLAEKLTI++DRG+GMLTR+YNIKK ACGD K+KPS+L DK+LES +K IV+KF
Sbjct: 11 QKLAEKLTILNDRGIGMLTRLYNIKKQGQVWKACGDPKAKPSYLIDKNLESAVKFIVRKF 70
Query: 305 PNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
P ++ ++ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 PAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 113
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 964 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1023
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1024 YSPAIEGHCNNIHCLAK 1040
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 166 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 205
>gi|119850911|gb|AAI27068.1| Nckap1 protein [Mus musculus]
Length = 1133
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 664 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMAVWEHTFTPREYLTSHLEIRFTK 723
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 724 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 783
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 784 HGEPTITSLYTNWYLETLLRQVSNGHI 810
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 740 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 799
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 800 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 858
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 82/103 (79%), Gaps = 10/103 (9%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKK------ACGDAKSKPSFLSDKSLESCIKQIVKKF 304
+KLAEKLTI++DRGVGMLTR+YNIKK ACGD K+KPS+L DK+LES +K IV+KF
Sbjct: 10 QKLAEKLTILNDRGVGMLTRLYNIKKQGQVWKACGDPKAKPSYLIDKNLESAVKFIVRKF 69
Query: 305 PNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
P ++ ++ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 70 PAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 112
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 963 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1022
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1023 YSPAIEGHCNNIHCLAK 1039
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 165 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 204
>gi|28972293|dbj|BAC65600.1| mKIAA0587 protein [Mus musculus]
Length = 1062
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 661 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMAVWEHTFTPREYLTSHLEIRFTK 720
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 721 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 780
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 781 HGEPTITSLYTNWYLETLLRQVSNGHI 807
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 737 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 796
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 797 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 855
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 35 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 94
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 95 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 131
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 960 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1019
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1020 YSPAIEGHCNNIHCLAK 1036
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 184 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 223
>gi|358410847|ref|XP_003581849.1| PREDICTED: LOW QUALITY PROTEIN: nck-associated protein 1 [Bos
taurus]
Length = 673
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 204 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 263
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 264 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 323
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 324 HGEPTITSLYTNWYLETLLRQVSNGHI 350
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 280 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 339
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 340 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDLSEMRSLSELLGPYGMKFLSE 398
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 503 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 562
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 563 YSPAIEGHCNNIHCLAK 579
>gi|417405938|gb|JAA49656.1| Putative membrane-associated hematopoietic protein [Desmodus
rotundus]
Length = 1128
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 115/147 (78%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 659 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM+VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 719 SIVGMTMYNQATQEIAKPSELLTSVRAYMSVLQSIENYVQIDITRVFNNVLLQQTQHLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 779 HGEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 735 KPSELLTSVRAYMSVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 795 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 853
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 199
>gi|395837153|ref|XP_003791505.1| PREDICTED: nck-associated protein 1 [Otolemur garnettii]
Length = 1128
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 659 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 719 SIVGMTMYNQTTQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 779 HGEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 735 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 795 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 853
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 199
>gi|395519896|ref|XP_003764077.1| PREDICTED: nck-associated protein 1 [Sarcophilus harrisii]
Length = 1102
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 633 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMAVWEHTFTPREYLTSHLEIRFTK 692
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 693 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 752
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 753 HGEPTITSLYTNWYLETLLRQVSNGHI 779
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 709 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 768
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 769 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 827
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 932 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 991
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 992 YSPAIEGHCNNIHCLAK 1008
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 61/81 (75%), Gaps = 4/81 (4%)
Query: 267 MLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS----VSGISQIRSDI 322
ML + + KACGD K+KPS+L DK+LES +K IV+KFP ++ ++ ++ + + +S+I
Sbjct: 1 MLPQQGQVWKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETRNNNQQLAQLQKEKSEI 60
Query: 323 VKSLSLYYYTFVDLLHFKDCV 343
+K+L+LYY+TFVD++ FKD V
Sbjct: 61 LKNLALYYFTFVDVMEFKDHV 81
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 134 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 173
>gi|355706587|gb|AES02686.1| NCK-associated protein 1 [Mustela putorius furo]
Length = 747
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 272 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 331
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 332 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 391
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 392 HGEPTITSLYTNWYLETLLRQVSNGHI 418
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 88/125 (70%), Gaps = 11/125 (8%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 348 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 407
Query: 608 VLLRRVSAGNICF------SLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGM 661
LLR+VS G+I + + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGM
Sbjct: 408 TLLRQVSNGHIAYFPAMKAFVTMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGM 467
Query: 662 KLLNE 666
K L+E
Sbjct: 468 KFLSE 472
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 577 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 636
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 637 YSPAIEGHCNNIHCLAK 653
>gi|291391867|ref|XP_002712371.1| PREDICTED: NCK-associated protein 1 [Oryctolagus cuniculus]
gi|344268772|ref|XP_003406230.1| PREDICTED: nck-associated protein 1 isoform 1 [Loxodonta africana]
Length = 1128
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 659 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 719 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 779 HGEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 735 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 795 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 853
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 199
>gi|335303098|ref|XP_003359629.1| PREDICTED: nck-associated protein 1 isoform 1 [Sus scrofa]
Length = 1128
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 659 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 719 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 779 HGEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 735 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 795 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 853
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 199
>gi|7305303|ref|NP_038464.1| nck-associated protein 1 isoform 1 [Homo sapiens]
gi|388452786|ref|NP_001253448.1| nck-associated protein 1 [Macaca mulatta]
gi|297668986|ref|XP_002812697.1| PREDICTED: nck-associated protein 1 isoform 2 [Pongo abelii]
gi|332209525|ref|XP_003253865.1| PREDICTED: nck-associated protein 1 isoform 1 [Nomascus leucogenys]
gi|332814914|ref|XP_003309404.1| PREDICTED: nck-associated protein 1 isoform 2 [Pan troglodytes]
gi|397506105|ref|XP_003823573.1| PREDICTED: nck-associated protein 1 isoform 1 [Pan paniscus]
gi|426337970|ref|XP_004032966.1| PREDICTED: nck-associated protein 1 isoform 1 [Gorilla gorilla
gorilla]
gi|12643947|sp|Q9Y2A7.1|NCKP1_HUMAN RecName: Full=Nck-associated protein 1; Short=NAP 1; AltName:
Full=Membrane-associated protein HEM-2; AltName:
Full=p125Nap1
gi|313103962|pdb|3P8C|B Chain B, Structure And Control Of The Actin Regulatory Wave Complex
gi|4760464|dbj|BAA77295.1| Nck-associated protein 1 (Nap1) [Homo sapiens]
gi|15929137|gb|AAH15025.1| NCK-associated protein 1 [Homo sapiens]
gi|30582905|gb|AAP35681.1| NCK-associated protein 1 [Homo sapiens]
gi|61361044|gb|AAX41978.1| NCK-associated protein 1 [synthetic construct]
gi|61361048|gb|AAX41979.1| NCK-associated protein 1 [synthetic construct]
gi|123993739|gb|ABM84471.1| NCK-associated protein 1 [synthetic construct]
gi|158259289|dbj|BAF85603.1| unnamed protein product [Homo sapiens]
gi|380808978|gb|AFE76364.1| nck-associated protein 1 isoform 1 [Macaca mulatta]
gi|384944902|gb|AFI36056.1| nck-associated protein 1 isoform 1 [Macaca mulatta]
gi|410227992|gb|JAA11215.1| NCK-associated protein 1 [Pan troglodytes]
gi|410268080|gb|JAA22006.1| NCK-associated protein 1 [Pan troglodytes]
gi|410305318|gb|JAA31259.1| NCK-associated protein 1 [Pan troglodytes]
gi|410356685|gb|JAA44542.1| NCK-associated protein 1 [Pan troglodytes]
Length = 1128
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 659 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 719 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 779 HGEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 735 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 795 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 853
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 199
>gi|380808976|gb|AFE76363.1| nck-associated protein 1 isoform 1 [Macaca mulatta]
Length = 1126
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 657 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 716
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 717 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 776
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 777 HGEPTITSLYTNWYLETLLRQVSNGHI 803
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 733 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 792
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 793 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 851
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 82/95 (86%), Gaps = 2/95 (2%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 --SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 105
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 956 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1015
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1016 YSPAIEGHCNNIHCLAK 1032
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 158 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 197
>gi|335303102|ref|XP_003359631.1| PREDICTED: nck-associated protein 1 isoform 3 [Sus scrofa]
Length = 1126
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 657 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 716
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 717 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 776
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 777 HGEPTITSLYTNWYLETLLRQVSNGHI 803
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 733 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 792
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 793 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 851
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 9 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 68
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 69 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 105
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 956 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1015
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1016 YSPAIEGHCNNIHCLAK 1032
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 158 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 197
>gi|405976952|gb|EKC41429.1| Nck-associated protein 1 [Crassostrea gigas]
Length = 1188
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 117/144 (81%), Gaps = 1/144 (0%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK RE T MDKLHMALTELC+AIN+C IQVW+ F PRE+ QHLE+RF++
Sbjct: 701 KPGTESVRKNRENFTRMDKLHMALTELCYAINHCNVIQVWEHGFVPREFFIQHLETRFNK 760
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
ALVGM+M+NPDTSEIAKPSELL+SV+A M+VLQ +ENYV ID+ RVFN+ L QQTQ DS
Sbjct: 761 ALVGMMMYNPDTSEIAKPSELLSSVKAIMSVLQGLENYVQIDIARVFNSVLPQQTQATDS 820
Query: 526 -HGEKTVAALYIQWYSEVLLRRVS 548
+GEKT+ A Y WY EVLLRRV+
Sbjct: 821 FNGEKTITANYTNWYLEVLLRRVT 844
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 75/108 (69%), Gaps = 7/108 (6%)
Query: 566 VENYVHIDMTRVFNNALLQQTQRMDS-HGEKTVAALYIQWYSEVLLRRVSA--GNICFSL 622
+ENYV ID+ RVFN+ L QQTQ DS +GEKT+ A Y WY EVLLRRV+ G I +S
Sbjct: 795 LENYVQIDIARVFNSVLPQQTQATDSFNGEKTITANYTNWYLEVLLRRVTVNIGQIVYSP 854
Query: 623 NQRAFVSLTAEGAIPFN----AEEFSDVNELRALADLIGPYGMKLLNE 666
N +AFV++ + N AEE++D+ ELRALA+LIGPYGM+ L E
Sbjct: 855 NHKAFVTVATDNNSKENLYLAAEEYADLTELRALAELIGPYGMRYLGE 902
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 77/132 (58%), Gaps = 39/132 (29%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAK---------------------------- 282
+KLAEKLTI++DRG GMLTRIYNIKK G+ +
Sbjct: 10 QKLAEKLTILNDRGRGMLTRIYNIKKMLGNPQNKPGFLTDKAYEPVYRYLLRRFPHVDSK 69
Query: 283 ---------SKPSFLSDKSLESCIKQIVKKFPNID--IKSVSGISQIRSDIVKSLSLYYY 331
SKP+FLSDKSL+S K + KKFPNID ++ I+ I+ D+VKSLSLYY+
Sbjct: 70 SSTMLTKTDSKPAFLSDKSLDSVFKYLHKKFPNIDNHAGALQVINNIKQDVVKSLSLYYF 129
Query: 332 TFVDLLHFKDCV 343
TFVD++ FKD V
Sbjct: 130 TFVDIMDFKDHV 141
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 70/122 (57%), Gaps = 16/122 (13%)
Query: 96 DCLTDWLREIEEY--ASFKVLRVLVGGTSGLKIVNEMASAAGLLCTVDPALATALASDKT 153
D L D L + + AS + L+ V K+VNEMASAAGL C +DP L +AL S K
Sbjct: 971 DALLDVLEDRIPFLMASVQDLQHFVPNMKDTKVVNEMASAAGLSCDIDPLLISALRSQKN 1030
Query: 154 D--------------LDEDEHVLACLLMVFVAVCIPKLARNEACFYLASLEGHSNNIHCM 199
+ +E ++ LACLLMVFVAV IP LA+ + + ASLEG+ +N HC+
Sbjct: 1031 EDGERKASTSSDTEVANESDYELACLLMVFVAVSIPTLAKKDVSVFKASLEGNLSNCHCL 1090
Query: 200 AR 201
A+
Sbjct: 1091 AK 1092
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 36/43 (83%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
L +N A+E ++ SD +FPRLGQM++DY++P++KLSEEF+PH
Sbjct: 191 LSLYNVAYEYLNASSDPSFPRLGQMVIDYDIPLRKLSEEFVPH 233
>gi|363735758|ref|XP_001232275.2| PREDICTED: nck-associated protein 1 isoform 1 [Gallus gallus]
Length = 1134
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 665 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 724
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 725 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 784
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 785 HGEPTITSLYTNWYLETLLRQVSNGHI 811
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 741 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 800
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+RAL++L+GPYGMK L+E
Sbjct: 801 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRALSELLGPYGMKFLSE 859
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 79/103 (76%), Gaps = 10/103 (9%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIK------KACGDAKSKPSFLSDKSLESCIKQIVKKF 304
+KLAEKLTI++DRGVGMLTR+ + KACGD K+KPS+L DK+LES +K IV+KF
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLXXLSQQGQVWKACGDPKAKPSYLIDKNLESAVKFIVRKF 70
Query: 305 PNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
P ++ ++ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 PAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 113
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 964 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1023
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1024 YSPAIEGHCNNIHCLAK 1040
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 166 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 205
>gi|291241694|ref|XP_002740747.1| PREDICTED: RAB30, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 202
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 93/124 (75%), Positives = 111/124 (89%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYK+LFKVVL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTV+I ++++KLQI
Sbjct: 1 MEDYKYLFKVVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVQIGDDKVKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGG 120
WDTAGQERFRSITQSYYRSA AL++VYD++ +F CL DW++EIE+YAS K + VLVG
Sbjct: 61 WDTAGQERFRSITQSYYRSADALVVVYDVTSFESFRCLPDWIKEIEQYASNKAITVLVGN 120
Query: 121 TSGL 124
+ L
Sbjct: 121 KTDL 124
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 11/84 (13%)
Query: 173 CIPKLARNEACFYLASLEGHSNN--IHCMARNKIDR-EDREIPTEVGEDFAKRHDMYYLE 229
C+P ++ +E +++N I + NK D EDRE+ + G +FA H+M +LE
Sbjct: 97 CLPD--------WIKEIEQYASNKAITVLVGNKTDLIEDREVSLDNGTNFASTHEMRFLE 148
Query: 230 TSAKASDNVEKLFMQIAAELMEKL 253
TSAK +DNV+KLF+ IA EL +++
Sbjct: 149 TSAKEADNVDKLFLDIAEELTKRV 172
>gi|123994267|gb|ABM84735.1| NCK-associated protein 1 [synthetic construct]
Length = 1128
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 659 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 719 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 779 HGEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 735 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 795 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 853
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 199
>gi|119631360|gb|EAX10955.1| NCK-associated protein 1, isoform CRA_d [Homo sapiens]
Length = 1126
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 659 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 719 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 779 HGEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 735 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 795 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 853
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 956 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1015
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1016 YSPAIEGHCNNIHCLAK 1032
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 199
>gi|344268774|ref|XP_003406231.1| PREDICTED: nck-associated protein 1 isoform 2 [Loxodonta africana]
Length = 1134
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 665 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 724
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 725 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 784
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 785 HGEPTITSLYTNWYLETLLRQVSNGHI 811
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 741 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 800
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 801 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 859
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 82/103 (79%), Gaps = 10/103 (9%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKK------ACGDAKSKPSFLSDKSLESCIKQIVKKF 304
+KLAEKLTI++DRGVGMLTR+YNIKK ACGD K+KPS+L DK+LES +K IV+KF
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKQGQVWKACGDPKAKPSYLIDKNLESAVKFIVRKF 70
Query: 305 PNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
P ++ ++ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 PAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 113
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 964 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1023
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1024 YSPAIEGHCNNIHCLAK 1040
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 166 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 205
>gi|335303100|ref|XP_003359630.1| PREDICTED: nck-associated protein 1 isoform 2 [Sus scrofa]
Length = 1134
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 665 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 724
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 725 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 784
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 785 HGEPTITSLYTNWYLETLLRQVSNGHI 811
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 741 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 800
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 801 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 859
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 82/103 (79%), Gaps = 10/103 (9%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKK------ACGDAKSKPSFLSDKSLESCIKQIVKKF 304
+KLAEKLTI++DRGVGMLTR+YNIKK ACGD K+KPS+L DK+LES +K IV+KF
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKQGQVWKACGDPKAKPSYLIDKNLESAVKFIVRKF 70
Query: 305 PNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
P ++ ++ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 PAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 113
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 964 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1023
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1024 YSPAIEGHCNNIHCLAK 1040
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 166 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 205
>gi|296490726|tpg|DAA32839.1| TPA: NCK-associated protein 1-like [Bos taurus]
Length = 1115
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 646 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 705
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 706 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 765
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 766 HGEPTITSLYTNWYLETLLRQVSNGHI 792
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 722 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 781
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 782 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 840
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 945 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1004
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1005 YSPAIEGHCNNIHCLAK 1021
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 57/72 (79%), Gaps = 4/72 (5%)
Query: 276 KACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS----VSGISQIRSDIVKSLSLYYY 331
KACGD K+KPS+L DK+LES +K IV+KFP ++ ++ ++ + + +S+I+K+L+LYY+
Sbjct: 23 KACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYF 82
Query: 332 TFVDLLHFKDCV 343
TFVD++ FKD V
Sbjct: 83 TFVDVMEFKDHV 94
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 147 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 186
>gi|119631358|gb|EAX10953.1| NCK-associated protein 1, isoform CRA_b [Homo sapiens]
Length = 1132
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 665 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 724
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 725 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 784
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 785 HGEPTITSLYTNWYLETLLRQVSNGHI 811
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 741 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 800
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 801 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 859
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 82/103 (79%), Gaps = 10/103 (9%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKK------ACGDAKSKPSFLSDKSLESCIKQIVKKF 304
+KLAEKLTI++DRGVGMLTR+YNIKK ACGD K+KPS+L DK+LES +K IV+KF
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKQGQVWKACGDPKAKPSYLIDKNLESAVKFIVRKF 70
Query: 305 PNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
P ++ ++ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 PAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 113
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 962 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1021
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1022 YSPAIEGHCNNIHCLAK 1038
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 166 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 205
>gi|45545411|ref|NP_995314.1| nck-associated protein 1 isoform 2 [Homo sapiens]
gi|297668984|ref|XP_002812696.1| PREDICTED: nck-associated protein 1 isoform 1 [Pongo abelii]
gi|332209527|ref|XP_003253866.1| PREDICTED: nck-associated protein 1 isoform 2 [Nomascus leucogenys]
gi|332814916|ref|XP_001148485.2| PREDICTED: nck-associated protein 1 isoform 1 [Pan troglodytes]
gi|397506107|ref|XP_003823574.1| PREDICTED: nck-associated protein 1 isoform 2 [Pan paniscus]
gi|426337972|ref|XP_004032967.1| PREDICTED: nck-associated protein 1 isoform 2 [Gorilla gorilla
gorilla]
gi|168267428|dbj|BAG09770.1| NCK-associated protein 1 [synthetic construct]
gi|380808980|gb|AFE76365.1| nck-associated protein 1 isoform 2 [Macaca mulatta]
Length = 1134
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 665 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 724
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 725 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 784
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 785 HGEPTITSLYTNWYLETLLRQVSNGHI 811
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 741 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 800
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 801 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 859
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 82/103 (79%), Gaps = 10/103 (9%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKK------ACGDAKSKPSFLSDKSLESCIKQIVKKF 304
+KLAEKLTI++DRGVGMLTR+YNIKK ACGD K+KPS+L DK+LES +K IV+KF
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKQGQVWKACGDPKAKPSYLIDKNLESAVKFIVRKF 70
Query: 305 PNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
P ++ ++ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 PAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 113
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 964 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1023
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1024 YSPAIEGHCNNIHCLAK 1040
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 166 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 205
>gi|30583923|gb|AAP36210.1| Homo sapiens NCK-associated protein 1 [synthetic construct]
gi|61370741|gb|AAX43545.1| NCK-associated protein 1 [synthetic construct]
Length = 1129
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 659 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 719 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 779 HGEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 735 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 795 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 853
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 199
>gi|345328021|ref|XP_001515690.2| PREDICTED: nck-associated protein 1 [Ornithorhynchus anatinus]
Length = 1164
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 695 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYAPNMVVWEHTFTPREYLTSHLEIRFTK 754
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 755 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 814
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 815 HGEPTITSLYTNWYLETLLRQVSNGHI 841
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 771 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 830
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+RAL++L+GPYGMK L+E
Sbjct: 831 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRALSELLGPYGMKFLSE 889
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 994 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1053
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1054 YSPAIEGHCNNIHCLAK 1070
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 63/84 (75%), Gaps = 7/84 (8%)
Query: 264 GVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS----VSGISQIR 319
G+G +++ KACGD K+KPS+L DK+LES +K IV+KFP ++ ++ ++ + + +
Sbjct: 63 GLGPQGQVW---KACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETRNNNQQLAQLQKEK 119
Query: 320 SDIVKSLSLYYYTFVDLLHFKDCV 343
S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 120 SEILKNLALYYFTFVDVMEFKDHV 143
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 196 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 235
>gi|449507482|ref|XP_004175212.1| PREDICTED: nck-associated protein 1 isoform 2 [Taeniopygia guttata]
Length = 1108
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 639 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 698
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 699 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 758
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 759 HGEPTITSLYTNWYLETLLRQVSNGHI 785
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 715 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 774
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+RAL++L+GPYGMK L+E
Sbjct: 775 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRALSELLGPYGMKFLSE 833
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 66/81 (81%), Gaps = 4/81 (4%)
Query: 267 MLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS----VSGISQIRSDI 322
MLTR++NIKKACGD K+KPS+L DK+LES +K IV+KFP ++ ++ ++ + + +S+I
Sbjct: 7 MLTRLFNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETRNNNQQLAQLQKEKSEI 66
Query: 323 VKSLSLYYYTFVDLLHFKDCV 343
+K+L+LYY+TFVD++ FKD V
Sbjct: 67 LKNLALYYFTFVDVMEFKDHV 87
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 938 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 997
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 998 YSPAIEGHCNNIHCLAK 1014
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 140 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 179
>gi|387017232|gb|AFJ50734.1| nck-associated protein 1-like [Crotalus adamanteus]
Length = 1126
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 657 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMIVWEHTFTPREYLTSHLEIRFTK 716
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 717 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 776
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 777 HGEPTITSLYTNWYLETLLRQVSNGHI 803
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 733 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 792
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+RAL++L+GPYGMK L+E
Sbjct: 793 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRALSELLGPYGMKFLSE 851
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 82/95 (86%), Gaps = 2/95 (2%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRG+GMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGIGMLTRLYNIKKACGDPKAKPSYLVDKNLESAVKFIVRKFPAVETR 70
Query: 311 --SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 105
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 956 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1015
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1016 YSPAIEGHCNNIHCLAK 1032
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 158 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 197
>gi|440906338|gb|ELR56611.1| Nck-associated protein 1, partial [Bos grunniens mutus]
Length = 1092
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 623 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 682
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 683 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 742
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 743 HGEPTITSLYTNWYLETLLRQVSNGHI 769
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 699 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 758
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 759 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 817
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 922 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 981
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 982 YSPAIEGHCNNIHCLAK 998
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 56/71 (78%), Gaps = 4/71 (5%)
Query: 277 ACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS----VSGISQIRSDIVKSLSLYYYT 332
ACGD K+KPS+L DK+LES +K IV+KFP ++ ++ ++ + + +S+I+K+L+LYY+T
Sbjct: 1 ACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFT 60
Query: 333 FVDLLHFKDCV 343
FVD++ FKD V
Sbjct: 61 FVDVMEFKDHV 71
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 124 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 163
>gi|431894970|gb|ELK04763.1| Nck-associated protein 1 [Pteropus alecto]
Length = 1128
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 659 KPGVESMRKNRLIVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 719 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 779 HGEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 735 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 795 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 853
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 199
>gi|363735756|ref|XP_003641604.1| PREDICTED: nck-associated protein 1 [Gallus gallus]
Length = 1130
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 661 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 720
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 721 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 780
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 781 HGEPTITSLYTNWYLETLLRQVSNGHI 807
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 737 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 796
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+RAL++L+GPYGMK L+E
Sbjct: 797 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRALSELLGPYGMKFLSE 855
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 82/99 (82%), Gaps = 6/99 (6%)
Query: 251 EKLAEKLTIMHDRGVGMLTRI--YNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNID 308
+KLAEKLTI++DRGVGMLTR+ YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLLWYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVE 70
Query: 309 IKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
++ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 TRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 109
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 960 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1019
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1020 YSPAIEGHCNNIHCLAK 1036
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 162 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 201
>gi|281342193|gb|EFB17777.1| hypothetical protein PANDA_017900 [Ailuropoda melanoleuca]
Length = 1092
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 623 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 682
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 683 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 742
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 743 HGEPTITSLYTNWYLETLLRQVSNGHI 769
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 699 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 758
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 759 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 817
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 922 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 981
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 982 YSPAIEGHCNNIHCLAK 998
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 56/71 (78%), Gaps = 4/71 (5%)
Query: 277 ACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS----VSGISQIRSDIVKSLSLYYYT 332
ACGD K+KPS+L DK+LES +K IV+KFP ++ ++ ++ + + +S+I+K+L+LYY+T
Sbjct: 1 ACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFT 60
Query: 333 FVDLLHFKDCV 343
FVD++ FKD V
Sbjct: 61 FVDVMEFKDHV 71
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 124 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 163
>gi|224055988|ref|XP_002196700.1| PREDICTED: nck-associated protein 1 isoform 1 [Taeniopygia guttata]
Length = 1114
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 645 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 704
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 705 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 764
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 765 HGEPTITSLYTNWYLETLLRQVSNGHI 791
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 721 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 780
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+RAL++L+GPYGMK L+E
Sbjct: 781 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRALSELLGPYGMKFLSE 839
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 66/87 (75%), Gaps = 10/87 (11%)
Query: 267 MLTRIYNIKK------ACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS----VSGIS 316
MLTR++NIKK ACGD K+KPS+L DK+LES +K IV+KFP ++ ++ ++ +
Sbjct: 7 MLTRLFNIKKQGQVWKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETRNNNQQLAQLQ 66
Query: 317 QIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 67 KEKSEILKNLALYYFTFVDVMEFKDHV 93
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 944 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1003
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1004 YSPAIEGHCNNIHCLAK 1020
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 146 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 185
>gi|354476511|ref|XP_003500468.1| PREDICTED: LOW QUALITY PROTEIN: nck-associated protein 1-like
[Cricetulus griseus]
Length = 1120
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 651 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 710
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 711 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 770
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 771 HGEPTITSLYTNWYLETLLRQVSNGHI 797
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 727 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 786
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 787 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 845
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K+D E+E+ +ACLLMVFVAV +P LA N
Sbjct: 950 VYELSSAAGLPCEIDPALVVALSSQKSDNISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1009
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1010 YSPAIEGHCNNIHCLAK 1026
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 58/74 (78%), Gaps = 4/74 (5%)
Query: 274 IKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS----VSGISQIRSDIVKSLSLY 329
+ KACGD K+KPS+L DK+LES +K IV+KFP ++ ++ ++ + + +S+I+K+L+LY
Sbjct: 26 VWKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALY 85
Query: 330 YYTFVDLLHFKDCV 343
Y+TFVD++ FKD V
Sbjct: 86 YFTFVDVMEFKDHV 99
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 152 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 191
>gi|327278416|ref|XP_003223958.1| PREDICTED: nck-associated protein 1-like isoform 1 [Anolis
carolinensis]
Length = 1128
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 659 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMIVWEHTFTPREYLTSHLEIRFTK 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 719 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 779 HGEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 735 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+RAL++L+GPYGMK L+E
Sbjct: 795 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRALSELLGPYGMKFLSE 853
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 199
>gi|449268739|gb|EMC79588.1| Nck-associated protein 1, partial [Columba livia]
Length = 1092
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 623 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 682
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 683 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 742
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 743 HGEPTITSLYTNWYLETLLRQVSNGHI 769
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 699 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 758
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+RAL++L+GPYGMK L+E
Sbjct: 759 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRALSELLGPYGMKFLSE 817
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 922 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 981
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 982 YSPAIEGHCNNIHCLAK 998
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 56/71 (78%), Gaps = 4/71 (5%)
Query: 277 ACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS----VSGISQIRSDIVKSLSLYYYT 332
ACGD K+KPS+L DK+LES +K IV+KFP ++ ++ ++ + + +S+I+K+L+LYY+T
Sbjct: 1 ACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFT 60
Query: 333 FVDLLHFKDCV 343
FVD++ FKD V
Sbjct: 61 FVDVMEFKDHV 71
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 124 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 163
>gi|40788295|dbj|BAA25513.2| KIAA0587 protein [Homo sapiens]
Length = 1171
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 702 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 761
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 762 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 821
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 822 HGEPTITSLYTNWYLETLLRQVSNGHI 848
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 778 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 837
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 838 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 896
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 82/103 (79%), Gaps = 10/103 (9%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKK------ACGDAKSKPSFLSDKSLESCIKQIVKKF 304
+KLAEKLTI++DRGVGMLTR+YNIKK ACGD K+KPS+L DK+LES +K IV+KF
Sbjct: 48 QKLAEKLTILNDRGVGMLTRLYNIKKQGQVWKACGDPKAKPSYLIDKNLESAVKFIVRKF 107
Query: 305 PNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
P ++ ++ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 108 PAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 150
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 1001 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1060
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1061 YSPAIEGHCNNIHCLAK 1077
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 203 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 242
>gi|403258598|ref|XP_003921842.1| PREDICTED: nck-associated protein 1 [Saimiri boliviensis
boliviensis]
Length = 1023
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 554 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 613
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 614 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 673
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 674 HGEPTITSLYTNWYLETLLRQVSNGHI 700
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 630 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 689
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 690 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 748
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 853 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 912
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 913 YSPAIEGHCNNIHCLAK 929
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 60 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 99
>gi|348585567|ref|XP_003478543.1| PREDICTED: nck-associated protein 1-like [Cavia porcellus]
Length = 1102
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 633 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 692
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 693 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 752
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 753 HGEPTITSLYTNWYLETLLRQVSNGHI 779
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 709 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 768
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 769 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 827
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 932 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 991
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 992 YSPAIEGHCNNIHCLAK 1008
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 61/81 (75%), Gaps = 4/81 (4%)
Query: 267 MLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS----VSGISQIRSDI 322
ML + + KACGD K+KPS+L DK+LES +K IV+KFP ++ ++ ++ + + +S+I
Sbjct: 1 MLPQQGQVWKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETRNNNQQLAQLQKEKSEI 60
Query: 323 VKSLSLYYYTFVDLLHFKDCV 343
+K+L+LYY+TFVD++ FKD V
Sbjct: 61 LKNLALYYFTFVDVMEFKDHV 81
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 134 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 173
>gi|327278418|ref|XP_003223959.1| PREDICTED: nck-associated protein 1-like isoform 2 [Anolis
carolinensis]
Length = 1134
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 665 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMIVWEHTFTPREYLTSHLEIRFTK 724
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 725 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 784
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 785 HGEPTITSLYTNWYLETLLRQVSNGHI 811
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 741 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 800
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+RAL++L+GPYGMK L+E
Sbjct: 801 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRALSELLGPYGMKFLSE 859
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 82/103 (79%), Gaps = 10/103 (9%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKK------ACGDAKSKPSFLSDKSLESCIKQIVKKF 304
+KLAEKLTI++DRGVGMLTR+YNIKK ACGD K+KPS+L DK+LES +K IV+KF
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKQGQVWKACGDPKAKPSYLIDKNLESAVKFIVRKF 70
Query: 305 PNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
P ++ ++ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 PAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 113
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 964 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1023
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1024 YSPAIEGHCNNIHCLAK 1040
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 166 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 205
>gi|410969040|ref|XP_003991006.1| PREDICTED: nck-associated protein 1 [Felis catus]
Length = 1102
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 633 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 692
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 693 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 752
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 753 HGEPTITSLYTNWYLETLLRQVSNGHI 779
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 709 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 768
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 769 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 827
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 932 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 991
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 992 YSPAIEGHCNNIHCLAK 1008
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 61/81 (75%), Gaps = 4/81 (4%)
Query: 267 MLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS----VSGISQIRSDI 322
ML + + KACGD K+KPS+L DK+LES +K IV+KFP ++ ++ ++ + + +S+I
Sbjct: 1 MLPQQGQVWKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETRNNNQQLAQLQKEKSEI 60
Query: 323 VKSLSLYYYTFVDLLHFKDCV 343
+K+L+LYY+TFVD++ FKD V
Sbjct: 61 LKNLALYYFTFVDVMEFKDHV 81
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 134 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 173
>gi|194222377|ref|XP_001917677.1| PREDICTED: nck-associated protein 1 [Equus caballus]
Length = 1102
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 633 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 692
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 693 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 752
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 753 HGEPTITSLYTNWYLETLLRQVSNGHI 779
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 709 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 768
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 769 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 827
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 932 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 991
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 992 YSPAIEGHCNNIHCLAK 1008
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 61/81 (75%), Gaps = 4/81 (4%)
Query: 267 MLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS----VSGISQIRSDI 322
ML + + KACGD K+KPS+L DK+LES +K IV+KFP ++ ++ ++ + + +S+I
Sbjct: 1 MLPQQGQVWKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETRNNNQQLAQLQKEKSEI 60
Query: 323 VKSLSLYYYTFVDLLHFKDCV 343
+K+L+LYY+TFVD++ FKD V
Sbjct: 61 LKNLALYYFTFVDVMEFKDHV 81
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 134 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 173
>gi|359062967|ref|XP_002685311.2| PREDICTED: nck-associated protein 1 [Bos taurus]
gi|426222457|ref|XP_004005408.1| PREDICTED: nck-associated protein 1 [Ovis aries]
Length = 1102
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 633 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 692
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 693 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 752
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 753 HGEPTITSLYTNWYLETLLRQVSNGHI 779
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 709 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 768
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 769 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 827
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 932 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 991
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 992 YSPAIEGHCNNIHCLAK 1008
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 61/81 (75%), Gaps = 4/81 (4%)
Query: 267 MLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS----VSGISQIRSDI 322
ML + + KACGD K+KPS+L DK+LES +K IV+KFP ++ ++ ++ + + +S+I
Sbjct: 1 MLPQQGQVWKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETRNNNQQLAQLQKEKSEI 60
Query: 323 VKSLSLYYYTFVDLLHFKDCV 343
+K+L+LYY+TFVD++ FKD V
Sbjct: 61 LKNLALYYFTFVDVMEFKDHV 81
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 134 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 173
>gi|301785213|ref|XP_002928023.1| PREDICTED: nck-associated protein 1-like [Ailuropoda melanoleuca]
Length = 1102
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 633 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 692
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 693 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 752
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 753 HGEPTITSLYTNWYLETLLRQVSNGHI 779
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 709 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 768
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 769 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 827
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 932 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 991
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 992 YSPAIEGHCNNIHCLAK 1008
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 61/81 (75%), Gaps = 4/81 (4%)
Query: 267 MLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS----VSGISQIRSDI 322
ML + + KACGD K+KPS+L DK+LES +K IV+KFP ++ ++ ++ + + +S+I
Sbjct: 1 MLPQQGQVWKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETRNNNQQLAQLQKEKSEI 60
Query: 323 VKSLSLYYYTFVDLLHFKDCV 343
+K+L+LYY+TFVD++ FKD V
Sbjct: 61 LKNLALYYFTFVDVMEFKDHV 81
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 134 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 173
>gi|432107273|gb|ELK32687.1| Nck-associated protein 1, partial [Myotis davidii]
Length = 1138
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 669 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 728
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 729 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 788
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 789 HGEPTITSLYTNWYLETLLRQVSNGHI 815
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 745 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 804
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 805 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 863
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 968 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1027
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1028 YSPAIEGHCNNIHCLAK 1044
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 182 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 221
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 29/35 (82%)
Query: 277 ACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS 311
ACGD K+KPS+L DK+LES +K IV+KFP ++ ++
Sbjct: 1 ACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETRN 35
>gi|355565023|gb|EHH21512.1| hypothetical protein EGK_04598, partial [Macaca mulatta]
Length = 1101
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 632 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 691
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 692 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 751
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 752 HGEPTITSLYTNWYLETLLRQVSNGHI 778
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 708 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 767
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 768 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 826
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 931 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 990
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 991 YSPAIEGHCNNIHCLAK 1007
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 58/74 (78%), Gaps = 4/74 (5%)
Query: 274 IKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS----VSGISQIRSDIVKSLSLY 329
+ KACGD K+KPS+L DK+LES +K IV+KFP ++ ++ ++ + + +S+I+K+L+LY
Sbjct: 7 VWKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALY 66
Query: 330 YYTFVDLLHFKDCV 343
Y+TFVD++ FKD V
Sbjct: 67 YFTFVDVMEFKDHV 80
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 133 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 172
>gi|355750674|gb|EHH55001.1| hypothetical protein EGM_04123, partial [Macaca fascicularis]
Length = 1101
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 632 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 691
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 692 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 751
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 752 HGEPTITSLYTNWYLETLLRQVSNGHI 778
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 708 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 767
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 768 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 826
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 931 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 990
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 991 YSPAIEGHCNNIHCLAK 1007
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 58/74 (78%), Gaps = 4/74 (5%)
Query: 274 IKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS----VSGISQIRSDIVKSLSLY 329
+ KACGD K+KPS+L DK+LES +K IV+KFP ++ ++ ++ + + +S+I+K+L+LY
Sbjct: 7 VWKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALY 66
Query: 330 YYTFVDLLHFKDCV 343
Y+TFVD++ FKD V
Sbjct: 67 YFTFVDVMEFKDHV 80
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 133 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 172
>gi|345797072|ref|XP_535990.3| PREDICTED: nck-associated protein 1 [Canis lupus familiaris]
Length = 1102
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 633 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 692
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 693 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 752
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 753 HGEPTITSLYTNWYLETLLRQVSNGHI 779
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 709 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 768
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 769 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 827
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 932 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 991
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 992 YSPAIEGHCNNIHCLAK 1008
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 61/81 (75%), Gaps = 4/81 (4%)
Query: 267 MLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS----VSGISQIRSDI 322
ML + + KACGD K+KPS+L DK+LES +K IV+KFP ++ ++ ++ + + +S+I
Sbjct: 1 MLPQQGQVWKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETRNNNQQLAQLQKEKSEI 60
Query: 323 VKSLSLYYYTFVDLLHFKDCV 343
+K+L+LYY+TFVD++ FKD V
Sbjct: 61 LKNLALYYFTFVDVMEFKDHV 81
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 134 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 173
>gi|296204355|ref|XP_002749299.1| PREDICTED: nck-associated protein 1 [Callithrix jacchus]
Length = 1102
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 633 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 692
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 693 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 752
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 753 HGEPTITSLYTNWYLETLLRQVSNGHI 779
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 709 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 768
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 769 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 827
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 932 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 991
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 992 YSPAIEGHCNNIHCLAK 1008
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 61/81 (75%), Gaps = 4/81 (4%)
Query: 267 MLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS----VSGISQIRSDI 322
ML + + KACGD K+KPS+L DK+LES +K IV+KFP ++ ++ ++ + + +S+I
Sbjct: 1 MLPQQGQVWKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETRNNNQQLAQLQKEKSEI 60
Query: 323 VKSLSLYYYTFVDLLHFKDCV 343
+K+L+LYY+TFVD++ FKD V
Sbjct: 61 LKNLALYYFTFVDVMEFKDHV 81
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 134 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 173
>gi|72136116|ref|XP_795833.1| PREDICTED: ras-related protein Rab-30-like [Strongylocentrotus
purpuratus]
gi|115689778|ref|XP_001199469.1| PREDICTED: ras-related protein Rab-30-like [Strongylocentrotus
purpuratus]
Length = 216
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 92/119 (77%), Positives = 108/119 (90%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYK+LFKVVL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKT+EI E++KLQI
Sbjct: 1 MEDYKYLFKVVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTIEIGGEKVKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYY SA AL+LV+D++ + +F+ L WLRE+E+YAS KV+ VLVG
Sbjct: 61 WDTAGQERFRSITQSYYHSADALVLVFDVTSKESFNALPSWLREVEQYASPKVISVLVG 119
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 160 HVLACLLMVFVAVCIPKLARNEACFYLASLEGHSNN--IHCMARNKID-REDREIPTEVG 216
H L++VF K + N +L +E +++ I + NKID +DRE+ E G
Sbjct: 78 HSADALVLVFDVTS--KESFNALPSWLREVEQYASPKVISVLVGNKIDLGKDREVNEEDG 135
Query: 217 EDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIMHD 262
+ FA H M +LETSAK SDNV++LF+ IA EL + I HD
Sbjct: 136 QSFADSHSMRFLETSAKESDNVDRLFLDIAVELTNNVRNG-EIRHD 180
>gi|351698140|gb|EHB01059.1| Nck-associated protein 1, partial [Heterocephalus glaber]
Length = 1025
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 623 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 682
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 683 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 742
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 743 HGEPTITSLYTNWYLETLLRQVSNGHI 769
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 699 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 758
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 759 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 817
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 922 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 981
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 982 YSPAIEGHCNNIHCLAK 998
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 56/71 (78%), Gaps = 4/71 (5%)
Query: 277 ACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS----VSGISQIRSDIVKSLSLYYYT 332
ACGD K+KPS+L DK+LES +K IV+KFP ++ ++ ++ + + +S+I+K+L+LYY+T
Sbjct: 1 ACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFT 60
Query: 333 FVDLLHFKDCV 343
FVD++ FKD V
Sbjct: 61 FVDVMEFKDHV 71
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 124 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 163
>gi|148223970|ref|NP_001087969.1| nck-associated protein 1 [Xenopus laevis]
gi|82180874|sp|Q640K3.1|NCKP1_XENLA RecName: Full=Nck-associated protein 1; Short=NAP 1
gi|52139068|gb|AAH82621.1| Nckap1 protein [Xenopus laevis]
Length = 1128
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 659 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYAPNMVVWEHTFTPREYLTSHLEIRFTK 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 719 SIVGMTMYNQVTQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 779 HGEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 546 RVSETQVKSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAAL 600
+V++ K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +L
Sbjct: 728 QVTQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSL 787
Query: 601 YIQWYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYG 660
Y WY E LLR+VS G+I + +AFV+L E + FNAEE+SD++E+RAL++L+GPYG
Sbjct: 788 YTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRALSELLGPYG 847
Query: 661 MKLLNE 666
MK L+E
Sbjct: 848 MKFLSE 853
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTDL--DEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSETISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N +HEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYSHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 199
>gi|301604872|ref|XP_002932060.1| PREDICTED: nck-associated protein 1 isoform 2 [Xenopus (Silurana)
tropicalis]
Length = 1128
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 659 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYAPNMVVWEHTFTPREYLTSHLEIRFTK 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 719 SIVGMTMYNQVTQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 779 HGEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 546 RVSETQVKSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAAL 600
+V++ K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +L
Sbjct: 728 QVTQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSL 787
Query: 601 YIQWYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYG 660
Y WY E LLR+VS G+I + +AFV+L E + FNAEE+SD++E+RAL++L+GPYG
Sbjct: 788 YTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRALSELLGPYG 847
Query: 661 MKLLNE 666
MK L+E
Sbjct: 848 MKFLSE 853
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTDL--DEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSETISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N +HEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYSHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 199
>gi|301604870|ref|XP_002932059.1| PREDICTED: nck-associated protein 1 isoform 1 [Xenopus (Silurana)
tropicalis]
Length = 1134
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 665 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYAPNMVVWEHTFTPREYLTSHLEIRFTK 724
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 725 SIVGMTMYNQVTQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 784
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 785 HGEPTITSLYTNWYLETLLRQVSNGHI 811
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 546 RVSETQVKSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAAL 600
+V++ K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +L
Sbjct: 734 QVTQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSL 793
Query: 601 YIQWYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYG 660
Y WY E LLR+VS G+I + +AFV+L E + FNAEE+SD++E+RAL++L+GPYG
Sbjct: 794 YTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRALSELLGPYG 853
Query: 661 MKLLNE 666
MK L+E
Sbjct: 854 MKFLSE 859
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 82/103 (79%), Gaps = 10/103 (9%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKK------ACGDAKSKPSFLSDKSLESCIKQIVKKF 304
+KLAEKLTI++DRGVGMLTR+YNIKK ACGD K+KPS+L DK+LES +K IV+KF
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKQGQVWKACGDPKAKPSYLIDKNLESAVKFIVRKF 70
Query: 305 PNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
P ++ ++ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 PAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 113
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTDL--DEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 964 VYELSSAAGLPCEIDPALVVALSSQKSETISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1023
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1024 YSPAIEGHCNNIHCLAK 1040
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N +HEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 166 YNYSHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 205
>gi|432962104|ref|XP_004086670.1| PREDICTED: nck-associated protein 1-like [Oryzias latipes]
Length = 1128
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 659 KPGMESMRKNRLLVTNLDKLHTALSELCFSINYVPNLMVWEHTFTPREYLTSHLEIRFTK 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 719 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVTIDITRVFNNVLLQQTQHLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 779 HGEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 735 KPSELLTSVRAYMTVLQSIENYVTIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L + + FNAEE+SD++E+RAL++L+GPYGMK L+E
Sbjct: 795 TLLRQVSNGHIAYFPAMKAFVNLPTDNELTFNAEEYSDISEMRALSELLGPYGMKFLSE 853
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRG+GMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGIGMLTRVYNIKKACGDPKAKPSYLVDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P A +
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPMFACSVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 199
>gi|47224743|emb|CAG00337.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1057
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 624 KPGVESMRKNRLLVTNLDKLHTALSELCFSINYVPNLVVWEHTFTPREYLTSHLEIRFTK 683
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 684 SIVGMTMYNQTTQEIAKPSELLTSVRAYMTVLQSIENYVTIDITRVFNNVLLQQTQHLDS 743
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 744 HGEPTITSLYTNWYLETLLRQVSNGHI 770
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 700 KPSELLTSVRAYMTVLQSIENYVTIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 759
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 760 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 818
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 923 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 982
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 983 YSPAIEGHCNNIHCLAK 999
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 58/72 (80%), Gaps = 4/72 (5%)
Query: 276 KACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS----VSGISQIRSDIVKSLSLYYY 331
+ACGDAK+KPS+L DK+LES +K IV+KFP ++ ++ ++ + + +S+I+K+L+LYY+
Sbjct: 1 QACGDAKAKPSYLVDKNLESAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYF 60
Query: 332 TFVDLLHFKDCV 343
TFVD++ FKD V
Sbjct: 61 TFVDVMEFKDHV 72
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 125 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 164
>gi|390342568|ref|XP_003725687.1| PREDICTED: uncharacterized protein LOC762666 [Strongylocentrotus
purpuratus]
Length = 633
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 92/119 (77%), Positives = 108/119 (90%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYK+LFKVVL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKT+EI E++KLQI
Sbjct: 1 MEDYKYLFKVVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTIEIGGEKVKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYY SA AL+LV+D++ + +F+ L WLRE+E+YAS KV+ VLVG
Sbjct: 61 WDTAGQERFRSITQSYYHSADALVLVFDVTSKESFNALPSWLREVEQYASPKVISVLVG 119
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 196 IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
I + NKID +DRE+ E G+ FA H M +LETSAK SDNV++LF+ IA EL +
Sbjct: 114 ISVLVGNKIDLGKDREVNEEDGQSFADSHSMRFLETSAKESDNVDRLFLDIAVELTNNVR 173
Query: 255 EKLTIMHD 262
I HD
Sbjct: 174 NG-EIRHD 180
>gi|344236764|gb|EGV92867.1| Nck-associated protein 1 [Cricetulus griseus]
Length = 951
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 632 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 691
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 692 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 751
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 752 HGEPTITSLYTNWYLETLLRQVSNGHI 778
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 70/101 (69%), Gaps = 5/101 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 708 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 767
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNE 648
LLR+VS G+I + +AFV+L E + FNAEE+SD+++
Sbjct: 768 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISD 808
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 56/71 (78%), Gaps = 4/71 (5%)
Query: 277 ACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS----VSGISQIRSDIVKSLSLYYYT 332
ACGD K+KPS+L DK+LES +K IV+KFP ++ ++ ++ + + +S+I+K+L+LYY+T
Sbjct: 1 ACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFT 60
Query: 333 FVDLLHFKDCV 343
FVD++ FKD V
Sbjct: 61 FVDVMEFKDHV 71
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 124 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 163
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 157 EDEHVLACLLMVFVAVCIPKLARNEACFYLASLEGHSNNIHCMAR 201
E+E+ +ACLLMVFVAV +P LA N Y ++EGH NNIHC+A+
Sbjct: 813 EEEYKIACLLMVFVAVSLPTLASNVMSQYSPAIEGHCNNIHCLAK 857
>gi|193786083|dbj|BAG51019.1| unnamed protein product [Homo sapiens]
Length = 528
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 94/147 (63%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 59 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 118
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++E+YV ID+TRVFNN LLQQTQ +DS
Sbjct: 119 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIEDYVQIDITRVFNNVLLQQTQHLDS 178
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 179 HGEPTITSLYTNWYLETLLRQVSNGHI 205
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++E+YV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 135 KPSELLTSVRAYMTVLQSIEDYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 194
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 195 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 253
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 358 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 417
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 418 YSPAIEGHCNNIHCLAK 434
>gi|410900720|ref|XP_003963844.1| PREDICTED: nck-associated protein 1-like isoform 1 [Takifugu
rubripes]
Length = 1128
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 659 KPGVESMRKNRLLVTNLDKLHTALSELCFSINYVPNLVVWEHTFTPREYLTSHLEIRFTK 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 719 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVTIDITRVFNNVLLQQTQHLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 779 HGEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 735 KPSELLTSVRAYMTVLQSIENYVTIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 795 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 853
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 83/97 (85%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRG+GMLTR+YNIKKACGDAK+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGIGMLTRVYNIKKACGDAKAKPSYLVDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE PMKK+ EEF+PH
Sbjct: 160 YNYAHEMTHGASDREYPRLGQMIVDYENPMKKMMEEFVPH 199
>gi|410900722|ref|XP_003963845.1| PREDICTED: nck-associated protein 1-like isoform 2 [Takifugu
rubripes]
Length = 1134
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 665 KPGVESMRKNRLLVTNLDKLHTALSELCFSINYVPNLVVWEHTFTPREYLTSHLEIRFTK 724
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 725 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVTIDITRVFNNVLLQQTQHLDS 784
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 785 HGEPTITSLYTNWYLETLLRQVSNGHI 811
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 741 KPSELLTSVRAYMTVLQSIENYVTIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 800
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 801 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 859
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 83/103 (80%), Gaps = 10/103 (9%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKK------ACGDAKSKPSFLSDKSLESCIKQIVKKF 304
+KLAEKLTI++DRG+GMLTR+YNIKK ACGDAK+KPS+L DK+LES +K IV+KF
Sbjct: 11 QKLAEKLTILNDRGIGMLTRVYNIKKQGQVWKACGDAKAKPSYLVDKNLESAVKFIVRKF 70
Query: 305 PNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
P ++ ++ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 PAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 113
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 964 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1023
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1024 YSPAIEGHCNNIHCLAK 1040
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE PMKK+ EEF+PH
Sbjct: 166 YNYAHEMTHGASDREYPRLGQMIVDYENPMKKMMEEFVPH 205
>gi|119631359|gb|EAX10954.1| NCK-associated protein 1, isoform CRA_c [Homo sapiens]
Length = 866
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 659 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 719 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 779 HGEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 735 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 795 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 853
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 199
>gi|410900724|ref|XP_003963846.1| PREDICTED: nck-associated protein 1-like isoform 3 [Takifugu
rubripes]
Length = 1128
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 657 KPGVESMRKNRLLVTNLDKLHTALSELCFSINYVPNLVVWEHTFTPREYLTSHLEIRFTK 716
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 717 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVTIDITRVFNNVLLQQTQHLDS 776
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 777 HGEPTITSLYTNWYLETLLRQVSNGHI 803
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 733 KPSELLTSVRAYMTVLQSIENYVTIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 792
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 793 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 851
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 83/95 (87%), Gaps = 2/95 (2%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRG+GMLTR+YNIKKACGDAK+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGIGMLTRVYNIKKACGDAKAKPSYLVDKNLESAVKFIVRKFPAVETR 70
Query: 311 --SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 105
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 56/79 (70%), Gaps = 4/79 (5%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTDLD----EDEHVLACLLMVFVAVCIPKLARNEA 182
V E++SAAGL C +DPAL AL+S K+ + E+E+ +ACLLMVFVAV +P LA N
Sbjct: 956 VYELSSAAGLPCEIDPALVVALSSQKSGENLLHPEEEYKIACLLMVFVAVSLPTLASNVM 1015
Query: 183 CFYLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1016 SQYSPAIEGHCNNIHCLAK 1034
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE PMKK+ EEF+PH
Sbjct: 158 YNYAHEMTHGASDREYPRLGQMIVDYENPMKKMMEEFVPH 197
>gi|348501674|ref|XP_003438394.1| PREDICTED: nck-associated protein 1-like isoform 1 [Oreochromis
niloticus]
Length = 1128
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 659 KPGVESMRKNRLLVTNLDKLHTALSELCFSINYVPNLIVWEHTFTPREYLTSHLEIRFTK 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 719 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVTIDITRVFNNVLLQQTQHLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 779 HGEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 735 KPSELLTSVRAYMTVLQSIENYVTIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 795 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 853
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRG+GMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGIGMLTRVYNIKKACGDPKAKPSYLVDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 199
>gi|358410853|ref|XP_003581852.1| PREDICTED: nck-associated protein 1 [Bos taurus]
Length = 846
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 633 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 692
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 693 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 752
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 753 HGEPTITSLYTNWYLETLLRQVSNGHI 779
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 709 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 768
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 769 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 827
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 61/81 (75%), Gaps = 4/81 (4%)
Query: 267 MLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS----VSGISQIRSDI 322
ML + + KACGD K+KPS+L DK+LES +K IV+KFP ++ ++ ++ + + +S+I
Sbjct: 1 MLPQQGQVWKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETRNNNQQLAQLQKEKSEI 60
Query: 323 VKSLSLYYYTFVDLLHFKDCV 343
+K+L+LYY+TFVD++ FKD V
Sbjct: 61 LKNLALYYFTFVDVMEFKDHV 81
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 134 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 173
>gi|348501676|ref|XP_003438395.1| PREDICTED: nck-associated protein 1-like isoform 2 [Oreochromis
niloticus]
Length = 1134
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 665 KPGVESMRKNRLLVTNLDKLHTALSELCFSINYVPNLIVWEHTFTPREYLTSHLEIRFTK 724
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 725 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVTIDITRVFNNVLLQQTQHLDS 784
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 785 HGEPTITSLYTNWYLETLLRQVSNGHI 811
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 741 KPSELLTSVRAYMTVLQSIENYVTIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 800
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 801 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 859
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 82/103 (79%), Gaps = 10/103 (9%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKK------ACGDAKSKPSFLSDKSLESCIKQIVKKF 304
+KLAEKLTI++DRG+GMLTR+YNIKK ACGD K+KPS+L DK+LES +K IV+KF
Sbjct: 11 QKLAEKLTILNDRGIGMLTRVYNIKKQGQVWKACGDPKAKPSYLVDKNLESAVKFIVRKF 70
Query: 305 PNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
P ++ ++ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 PAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 113
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 964 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1023
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1024 YSPAIEGHCNNIHCLAK 1040
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 166 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 205
>gi|1708980|sp|P55161.1|NCKP1_RAT RecName: Full=Nck-associated protein 1; Short=NAP 1; AltName:
Full=Membrane-associated protein HEM-2; AltName:
Full=p125Nap1
gi|1304197|dbj|BAA12319.1| Nap1 protein [Rattus norvegicus]
Length = 1128
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 94/147 (63%), Positives = 113/147 (76%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 659 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMAVWEHTFTPREYLTSHLEIRFTK 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVR YM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 719 SIVGMTMYNQATQEIAKPSELLTSVREYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 779 HGEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 735 KPSELLTSVREYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 795 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 853
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYAHEMTHGASDREYPRLGQMIVDYEHPLKKMMEEFVPH 199
>gi|402888824|ref|XP_003907746.1| PREDICTED: nck-associated protein 1-like, partial [Papio anubis]
Length = 1108
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 858 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 917
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 918 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 977
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 978 HGEPTITSLYTNWYLETLLRQVSNGHI 1004
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 934 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 993
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 994 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 1052
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 82/103 (79%), Gaps = 10/103 (9%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKK------ACGDAKSKPSFLSDKSLESCIKQIVKKF 304
+KLAEKLTI++DRGVGMLTR+YNIKK ACGD K+KPS+L DK+LES +K IV+KF
Sbjct: 204 QKLAEKLTILNDRGVGMLTRLYNIKKQGQVWKACGDPKAKPSYLIDKNLESAVKFIVRKF 263
Query: 305 PNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
P ++ ++ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 264 PAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 306
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 359 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 398
>gi|510550|emb|CAA56333.1| transmembrane protein [Rattus sp.]
Length = 1118
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 112/142 (78%)
Query: 407 PGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRA 466
PG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF+++
Sbjct: 650 PGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMAVWEHTFTPREYLTSHLEIRFTKS 709
Query: 467 LVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSH 526
+VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DSH
Sbjct: 710 IVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSH 769
Query: 527 GEKTVAALYIQWYSEVLLRRVS 548
GE T+ +LY WY E LLR+VS
Sbjct: 770 GEPTITSLYTNWYLETLLRQVS 791
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 86/119 (72%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 725 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 784
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G++ + +AFV+L E + FNAEE+SD++E+R+L++L+ PYGMK L+E
Sbjct: 785 TLLRQVSNGHMPYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLAPYGMKFLSE 843
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 61/77 (79%), Gaps = 4/77 (5%)
Query: 271 IYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS----VSGISQIRSDIVKSL 326
+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ ++ ++ + + +S+I+K++
Sbjct: 22 LYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNM 81
Query: 327 SLYYYTFVDLLHFKDCV 343
+LYY+TFVD++ +D V
Sbjct: 82 ALYYFTFVDVMDLRDHV 98
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASD--KTDLDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S +T + E++ +ACLLMVFVAV +P LA N
Sbjct: 948 VYELSSAAGLPCEIDPALVVALSSQNQRTLVQEEDIKIACLLMVFVAVSLPTLASNVMSQ 1007
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+ +
Sbjct: 1008 YSPAIEGHCNNIHCLPK 1024
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 579 NNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPF 638
NN L Q Q+ S K +A Y + + LR ++C LN A + + + F
Sbjct: 63 NNQQLAQLQKEKSEILKNMALYYFTFVDVMDLR----DHVCDLLNTIAVCQVFFDITVNF 118
Query: 639 NAEEFSDVNELRALADLIGPYG--MKLLNELS-----LKAFNAAHEMVHNQSDVNFPRLG 691
+ + DL Y M LL+ + ++ +N AHEM H SD +PRLG
Sbjct: 119 DLT--------KNYLDLTVTYTTLMILLSRIEGRKAIIRLYNYAHEMTHGGSDREYPRLG 170
Query: 692 QMIMDYEVPMKKLSEEFIPH 711
QMI+DYE P+KK+ EF+PH
Sbjct: 171 QMIVDYEHPLKKMMVEFVPH 190
>gi|51136|emb|CAA43693.1| H19 [Mus musculus]
Length = 648
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/147 (63%), Positives = 113/147 (76%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 372 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMAVWEHTFTPREYLTSHLEIRFTK 431
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVR YM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 432 SIVGMTMYNQATQEIAKPSELLTSVREYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 491
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 492 HGEPTITSLYTNWYLETLLRQVSNGHI 518
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 448 KPSELLTSVREYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 507
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 508 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 566
>gi|224613516|gb|ACN60337.1| Nck-associated protein 1 [Salmo salar]
Length = 468
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 92/145 (63%), Positives = 112/145 (77%)
Query: 408 GAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRAL 467
G ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++++
Sbjct: 1 GVESMRKNRLLVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTKSI 60
Query: 468 VGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHG 527
VGM M+N T EIAKPSELL SVR+YM VLQ++ENYV ID+TRVFNN LLQQTQ +DSHG
Sbjct: 61 VGMTMYNQATQEIAKPSELLTSVRSYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHG 120
Query: 528 EKTVAALYIQWYSEVLLRRVSETQV 552
E T+ +LY WY E LLR+VS +
Sbjct: 121 EPTITSLYTNWYLETLLRQVSNGHI 145
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 75 KPSELLTSVRSYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 134
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 135 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 193
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 298 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSMPTLASNVMSQ 357
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 358 YSPAIEGHCNNIHCLAK 374
>gi|405971526|gb|EKC36361.1| Ras-related protein Rab-30 [Crassostrea gigas]
Length = 202
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 91/119 (76%), Positives = 106/119 (89%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
M+DYK+LFKVVL+G AGVGKTCLVRRFTQG+FPPGQGATIGVDFMIK+VE+N E+IKLQI
Sbjct: 1 MDDYKYLFKVVLIGEAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKSVEVNGEKIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYY SA+ALILVYD+ Q +FD + W++EIE+YA+ KV LVG
Sbjct: 61 WDTAGQERFRSITQSYYHSANALILVYDVCSQLSFDNIPHWIQEIEKYANTKVFSYLVG 119
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 67/109 (61%), Gaps = 6/109 (5%)
Query: 160 HVLACLLMVFVAVCIPKLARNEACFYLASLEGHSNN--IHCMARNKIDREDR-EIPTEVG 216
H L++V+ VC +L+ + ++ +E ++N + NKID+ +R EIP+ +G
Sbjct: 78 HSANALILVY-DVC-SQLSFDNIPHWIQEIEKYANTKVFSYLVGNKIDQINRREIPSHIG 135
Query: 217 EDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGV 265
E FAKR++M ++ETSAK ++NV+ LF IA EL K A + + D+GV
Sbjct: 136 EQFAKRYEMKFIETSAKEAENVDALFYDIATELT-KQAHQQALETDKGV 183
>gi|198420608|ref|XP_002124958.1| PREDICTED: similar to Nck-associated protein 1 [Ciona intestinalis]
Length = 1152
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/148 (64%), Positives = 113/148 (76%), Gaps = 1/148 (0%)
Query: 401 LNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLE 460
+ E KPG ES RK R +T MDK HMAL E+C AINY N VW+ TFAP+EYL HLE
Sbjct: 663 VQETTKPGLESKRKDRLYVTRMDKYHMALAEVCSAINYRANFVVWEHTFAPKEYLTAHLE 722
Query: 461 SRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQT 520
SRF++ LV M FN +TSEIAKPSELL +RAYM LQTVENYVH+D+TR+FN+ LLQQ+
Sbjct: 723 SRFAKHLVSMT-FNKETSEIAKPSELLCKLRAYMATLQTVENYVHLDVTRIFNSVLLQQS 781
Query: 521 QRMDSHGEKTVAALYIQWYSEVLLRRVS 548
Q +DSHGE T+ LY QWY EV+LR+VS
Sbjct: 782 QMVDSHGETTITTLYTQWYLEVMLRQVS 809
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 86/125 (68%), Gaps = 11/125 (8%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL LR Y TVENYVH+D+TR+FN+ LLQQ+Q +DSHGE T+ LY QWY E
Sbjct: 743 KPSELLCKLRAYMATLQTVENYVHLDVTRIFNSVLLQQSQMVDSHGETTITTLYTQWYLE 802
Query: 608 VLLRRVSAGNICFSLNQRAFVSL------TAEGAIPFNAEEFSDVNELRALADLIGPYGM 661
V+LR+VS G+ FS +R FV + ++ NAEE+S++NEL+ALA +IGPYGM
Sbjct: 803 VMLRQVSGGSTVFSEMRRHFVKVPNYADSSSSNQPIINAEEYSNINELKALAQIIGPYGM 862
Query: 662 KLLNE 666
K LNE
Sbjct: 863 KFLNE 867
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 85/106 (80%), Gaps = 5/106 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKL I+++R VGMLTRIYNIKKAC D++SKP++L+DK+LES IK IV+KFP +D +
Sbjct: 17 QKLAEKLIILNNRAVGMLTRIYNIKKACSDSRSKPTYLTDKALESGIKFIVRKFPQVDTR 76
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY-LSGHFDA 351
+ ++G++ +++I+K LSLYY+TFVD+L FKD Y L FD+
Sbjct: 77 NNQNQLAGVNNAKNEILKGLSLYYHTFVDVLEFKDHFYELLATFDS 122
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEACFYL 186
+NE+ASAAG+ C +DP L AL++ K + ++E+ +ACLLMVF+AV IP LARNE +L
Sbjct: 972 INELASAAGIPCEIDPTLCAALSAQKIENPDEEYKVACLLMVFLAVDIPVLARNERSVFL 1031
Query: 187 ASLEGHSNNIHCMAR 201
L H NN HC+AR
Sbjct: 1032 PELVAHGNNCHCLAR 1046
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 31/40 (77%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
++ AH+M+H + + ++ RLGQMI+D+E P+KKL E+F H
Sbjct: 166 YDHAHDMIHGKMEKDYARLGQMIVDFENPLKKLVEDFGAH 205
>gi|339236789|ref|XP_003379949.1| Nck-associated protein 1 [Trichinella spiralis]
gi|316977339|gb|EFV60450.1| Nck-associated protein 1 [Trichinella spiralis]
Length = 761
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 83/133 (62%), Positives = 108/133 (81%)
Query: 407 PGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRA 466
PG ESYR++RE++T +DKLH ALTELCFAI+Y I VW+ TFAPREYL QH+E+RF++
Sbjct: 347 PGDESYRRSREDMTLIDKLHFALTELCFAIDYYPQIVVWEHTFAPREYLTQHIEARFNKT 406
Query: 467 LVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSH 526
+V M M++ DT EIAKPSELL S+R YM+VLQT+ENYV ID+ R+FNN LLQQTQ D +
Sbjct: 407 VVAMAMYDKDTQEIAKPSELLNSIRTYMDVLQTLENYVQIDVVRIFNNVLLQQTQHQDCY 466
Query: 527 GEKTVAALYIQWY 539
GE+T+ +Y +W+
Sbjct: 467 GEETLTTIYTRWF 479
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 85/153 (55%), Gaps = 15/153 (9%)
Query: 520 TQRMDSHGEKTVAALYIQWYSEVLLRRVSETQVKSLNLLNFLRVY-----TVENYVHIDM 574
TQ +++ KTV A+ + + ++ K LLN +R Y T+ENYV ID+
Sbjct: 396 TQHIEARFNKTVVAM-------AMYDKDTQEIAKPSELLNSIRTYMDVLQTLENYVQIDV 448
Query: 575 TRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSLNQRAFVS-LTAE 633
R+FNN LLQQTQ D +GE+T+ +Y +W+ L I L R FVS +E
Sbjct: 449 VRIFNNVLLQQTQHQDCYGEETLTTIYTRWFLLALHATFLLPYIIGHL--RTFVSNPMSE 506
Query: 634 GAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
A F EE++D EL ALA+++G YGMK L+E
Sbjct: 507 VATSFFPEEYTDYPELCALAEILGAYGMKFLSE 539
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 33/91 (36%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+K+AEKL I+++R G++TRIYNIKK
Sbjct: 10 QKIAEKLVILNERTTGIITRIYNIKKTV-------------------------------- 37
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKD 341
V I+ I+ DI+K+LSLYY TFVDL+ KD
Sbjct: 38 -VQSINAIKQDIIKALSLYYNTFVDLMDLKD 67
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 154 DLDEDEHVLACLLMVFVAVCIPKLARNEACFYLASLEGHSNNIHCMAR 201
D +D++ + CLLMVF+AV + +LAR+E FY A+LE H NN HC+ +
Sbjct: 614 DAVDDDYNVCCLLMVFIAVSLTRLARSEN-FYHATLETHLNNSHCIPK 660
>gi|312373301|gb|EFR21066.1| hypothetical protein AND_17638 [Anopheles darlingi]
Length = 189
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/119 (74%), Positives = 99/119 (83%), Gaps = 18/119 (15%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFKVVLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVE++N++IKLQI
Sbjct: 37 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDNQKIKLQI 96
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA ALIL EI+E+A+ KVL++LVG
Sbjct: 97 WDTAGQERFRSITQSYYRSASALIL------------------EIQEHANSKVLKILVG 137
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 189 LEGHSNN--IHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIA 246
++ H+N+ + + NK DR+DREIP +VG +FAK+H MY+LETSAK +DNVE+LF IA
Sbjct: 123 IQEHANSKVLKILVGNKTDRDDREIPQDVGAEFAKQHGMYFLETSAKQADNVERLFYDIA 182
Query: 247 AELMEKL 253
A L+E L
Sbjct: 183 AVLIEVL 189
>gi|427792129|gb|JAA61516.1| Putative gtpase rab30 small g protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 201
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/119 (75%), Positives = 93/119 (78%), Gaps = 16/119 (13%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFKVVL+GNAGVGKTCLVRRFTQ TI K +KLQI
Sbjct: 10 MEDYKFLFKVVLIGNAGVGKTCLVRRFTQ--------VTIWTWLCXK--------VKLQI 53
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL DWLREIE+YAS KVLR LVG
Sbjct: 54 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEQYASPKVLRALVG 112
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 69/120 (57%), Gaps = 8/120 (6%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDFA 220
L++V+ C P C +L +E +++ + + NKIDREDREIPT +GE+FA
Sbjct: 76 LILVYDISCQPTFD----CLPDWLREIEQYASPKVLRALVGNKIDREDREIPTHIGEEFA 131
Query: 221 KRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGD 280
+R DMY++ETSAK +DNV+KLF +IA L + R + ++K+A GD
Sbjct: 132 RRSDMYFVETSAKEADNVDKLFTEIAVRLTAEARATHARYSGRPSTTGDSLPDLKEAAGD 191
>gi|156393822|ref|XP_001636526.1| predicted protein [Nematostella vectensis]
gi|156223630|gb|EDO44463.1| predicted protein [Nematostella vectensis]
Length = 165
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/124 (60%), Positives = 96/124 (77%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
M+DY +LFK++LVG+A VGKTCLVR+FT+G FPP QG TIGVDF IKTV+++ E++KLQI
Sbjct: 1 MDDYSYLFKIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGG 120
WDTAGQERFRSITQSYY +A +I+ YDI+ + +F+ L WL + Y S VL +VG
Sbjct: 61 WDTAGQERFRSITQSYYHNADGVIVTYDITNKKSFESLPQWLDDTNRYTSKDVLIAIVGN 120
Query: 121 TSGL 124
S L
Sbjct: 121 KSDL 124
>gi|156395372|ref|XP_001637085.1| predicted protein [Nematostella vectensis]
gi|187609752|sp|A7RU46.1|NAPA_NEMVE RecName: Full=Nck-associated protein 1 homolog
gi|156224194|gb|EDO45022.1| predicted protein [Nematostella vectensis]
Length = 1120
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 108/160 (67%)
Query: 388 ASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDF 447
+ RR KDKN K + E PG ES+RK+RE LT++D ++LTELC AI + I VW+
Sbjct: 641 SERRTKDKNKKNVHVEFKPPGIESFRKSRETLTSLDTKLLSLTELCHAITHTEAIPVWEH 700
Query: 448 TFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHID 507
FAP+EYL LE F++A+V M ++ D IA+PSE+L++V+A M+ L+++ENY +D
Sbjct: 701 IFAPKEYLSSQLEEFFAKAVVSMAQYDIDNQRIARPSEVLSNVKAMMSSLRSLENYTGVD 760
Query: 508 MTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRV 547
RVFN+ LLQQTQ DS G T+ +Y WY +V LRRV
Sbjct: 761 TARVFNHVLLQQTQPQDSQGANTITQMYTTWYLDVFLRRV 800
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 74/93 (79%), Gaps = 2/93 (2%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI+++RG GMLTRIYNIKKAC D KS+P FL DK+LE IK IV+KFP +D K
Sbjct: 10 QKLAEKLTILNERGEGMLTRIYNIKKACSDPKSRPGFLMDKALEPSIKYIVRKFPQMDTK 69
Query: 311 S--VSGISQIRSDIVKSLSLYYYTFVDLLHFKD 341
+ + + I+++++K LS YY+TFVD++ FKD
Sbjct: 70 ATQLQAVQSIQNEVMKGLSNYYFTFVDIMEFKD 102
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 50/81 (61%)
Query: 120 GTSGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLAR 179
G + ++V+EMA++AG C VDP L AL + K ED+ + LL+VFVAV +P LA
Sbjct: 946 GNNDRQVVDEMATSAGQECVVDPLLCAALRTLKEKKSEDDILTWSLLLVFVAVGLPSLAY 1005
Query: 180 NEACFYLASLEGHSNNIHCMA 200
+A Y LE H NN HC++
Sbjct: 1006 KDASEYNGELEAHDNNAHCIS 1026
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 35/43 (81%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
L FN A EM + +S+ +FPRLGQMI+DY+ P+KKL+E+F+PH
Sbjct: 154 LGLFNHAFEMRNGRSEESFPRLGQMILDYDSPLKKLAEQFVPH 196
>gi|340368035|ref|XP_003382558.1| PREDICTED: nck-associated protein 1-like [Amphimedon queenslandica]
Length = 1142
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 136/228 (59%), Gaps = 16/228 (7%)
Query: 391 RKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFA 450
+ K K K+ + +KPG ESYR++RE++T D L +LCF + +I WD TF
Sbjct: 654 KSKSKGGPKVPPQEVKPGEESYRRSREDMTNSDHAVRTLIDLCFTVTVFPSISAWDHTFT 713
Query: 451 PREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTR 510
PREYL HLE F + + M+ +NPDT +IA+PSE+L +++Y++ L+ +E YV++DMTR
Sbjct: 714 PREYLLPHLEELFIKNVFSMMKYNPDTQDIARPSEVLIRIQSYVSTLRNLELYVNVDMTR 773
Query: 511 VFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV-KSLNLLNFL--RVYTVE 567
V + LLQ+TQ +DS GE T+A+ Y WY+ VLL+RVS+ + S N + F+ RV + +
Sbjct: 774 VLTSVLLQETQPLDSKGEATIASTYSAWYNSVLLKRVSQGGICYSKNRMAFVSRRVMSFK 833
Query: 568 NYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSA 615
+ D+ Q + S E V IQ+ + L+ +VSA
Sbjct: 834 AEEYSDV------------QELQSLAE-IVGPYGIQYMGDRLMEQVSA 868
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 89/129 (68%), Gaps = 5/129 (3%)
Query: 546 RVSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWY 605
R SE ++ + ++ LR +E YV++DMTRV + LLQ+TQ +DS GE T+A+ Y WY
Sbjct: 745 RPSEVLIRIQSYVSTLR--NLELYVNVDMTRVLTSVLLQETQPLDSKGEATIASTYSAWY 802
Query: 606 SEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLN 665
+ VLL+RVS G IC+S N+ AFVS + F AEE+SDV EL++LA+++GPYG++ +
Sbjct: 803 NSVLLKRVSQGGICYSKNRMAFVS---RRVMSFKAEEYSDVQELQSLAEIVGPYGIQYMG 859
Query: 666 ELSLKAFNA 674
+ ++ +A
Sbjct: 860 DRLMEQVSA 868
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 66/93 (70%), Gaps = 3/93 (3%)
Query: 252 KLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS 311
+ AEKLTI+ +RG G+LTRIY+IKK C D+ +PSFLS+K+LES +K I KKFPN D K
Sbjct: 15 RFAEKLTILTERGHGLLTRIYSIKKICSDSSQRPSFLSEKALESALKHIAKKFPNFDSKD 74
Query: 312 ---VSGISQIRSDIVKSLSLYYYTFVDLLHFKD 341
++ IS + DI+ L +Y TFVD++ F D
Sbjct: 75 KTHLTVISSFQKDIMTLLPNHYSTFVDVMEFHD 107
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 120 GTSGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLAR 179
G + + MA AAG+ C VDP L+ + S D D+ + L +VF+ V +P+LA
Sbjct: 954 GDKDTRTADPMAIAAGIECDVDPLLSNVIKS-HCDKSPDDRQIWFLFLVFIGVYLPELAM 1012
Query: 180 NEACFYLASLEGHSNNIHCMA 200
E +L S EGHSNN+HC+A
Sbjct: 1013 KEESQFLPSYEGHSNNVHCLA 1033
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 630 LTAEGAIPFNAEEFSDVNELRALADLIGPYG--MKLLNELSLKA-----FNAAHEMVHNQ 682
+T+ + FN + + + + L DL+ Y M +L ++ + +N AHE
Sbjct: 113 ITSLATVQFNFDIALNFDLTKGLLDLVTIYASMMIMLGQIEDRKIICGLYNIAHETTRGA 172
Query: 683 SDVNFPRLGQMIMDYEVPMKKLSEEFIP 710
D +FPRL QMI+++E P++++SEEF P
Sbjct: 173 PDASFPRLAQMIVEFEHPIRRMSEEFQP 200
>gi|62858653|ref|NP_001016330.1| RAB43, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89266921|emb|CAJ82248.1| RAB43, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 209
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/171 (47%), Positives = 121/171 (70%), Gaps = 5/171 (2%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK++L+G+AGVGKTC+V+RF GVF QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 10 EQYDFLFKLILIGDAGVGKTCVVQRFRSGVFAERQGSTIGVDFTMKTLEIQGKRVKLQIW 69
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ I+ YDI+ + +F + W+ ++++YA ++++L+G
Sbjct: 70 DTAGQERFRTITQSYYRSANGAIIAYDITKRKSFASVPRWIEDVKKYAGSNIVQLLIGNK 129
Query: 122 SGLKIVNEMA--SAAGLL--CTVDPALATALASDKTDLDEDEHVLACLLMV 168
S L+ E+A A L C + A+ T+ A D ++++E +A LM+
Sbjct: 130 SDLREFREVALQEAETLARHCDITCAIETS-AKDSSNVEEAFVQMATELMM 179
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 193 SNNIHCMARNKID-REDREIPTEVGEDFAKRHDMY-YLETSAKASDNVEKLFMQIAAELM 250
SN + + NK D RE RE+ + E A+ D+ +ETSAK S NVE+ F+Q+A ELM
Sbjct: 119 SNIVQLLIGNKSDLREFREVALQEAETLARHCDITCAIETSAKDSSNVEEAFVQMATELM 178
>gi|402887099|ref|XP_003906942.1| PREDICTED: ras-related protein Rab-43 isoform 1 [Papio anubis]
gi|402887101|ref|XP_003906943.1| PREDICTED: ras-related protein Rab-43 isoform 2 [Papio anubis]
Length = 212
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 113/164 (68%), Gaps = 13/164 (7%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDI+ + +F + W+ ++ +YA F ++++L+G
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGFNIVQLLIGNK 132
Query: 122 SGLKIVNEMASAAG--------LLCTVDPALATALASDKTDLDE 157
S L + E++ A +LC ++ + A D ++++E
Sbjct: 133 SDLSELREVSLAEAQSLAEHYDILCAIETS-----AKDSSNVEE 171
>gi|193785521|dbj|BAG50887.1| unnamed protein product [Homo sapiens]
Length = 234
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/109 (66%), Positives = 86/109 (78%)
Query: 444 VWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENY 503
VW+ TF PREYL HLE RF++++VGM M+N T EIAKPSELL SVRAYM VLQ++ENY
Sbjct: 3 VWEHTFTPREYLTSHLEIRFTKSIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENY 62
Query: 504 VHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
V ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E LLR+VS +
Sbjct: 63 VQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLETLLRQVSNGHI 111
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 41 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 100
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 101 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 159
>gi|350584039|ref|XP_001925345.4| PREDICTED: NCK-associated protein 1-like [Sus scrofa]
Length = 968
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/248 (38%), Positives = 144/248 (58%), Gaps = 13/248 (5%)
Query: 315 ISQIRSDIVKSLSLYYYTFVDLLHFKDCVYL-SGHFDAQIASRRKKDKNNKKILNEII-- 371
+ ++ D+ SL Y D+ K+ V SG F +Q RR+ + K L ++
Sbjct: 267 VHKVTEDLFSSLKGYGKRVADIKESKEHVIANSGQFHSQ---RRQFLRMAVKELETVLAD 323
Query: 372 KPG-------AESYRKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDK 424
+PG + T +A+ K+ + +K E KPGAES+RK R +T MDK
Sbjct: 324 EPGLLGPKLLPKHCATTISKAKNKKTMKQRQTPRKGEPERDKPGAESHRKNRSIVTNMDK 383
Query: 425 LHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPS 484
LH+ LTEL A+N+ + V++ T P EYL+ HLE+R +RA+V + +N T EIA+PS
Sbjct: 384 LHLNLTELVLAMNHVHSFSVFEHTVFPSEYLNSHLEARLNRAIVWLAGYNATTQEIARPS 443
Query: 485 ELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLL 544
ELLA V+AY++ +Q++ ++ D++RV NALLQQTQ +DS GE+T+ LY WY E LL
Sbjct: 444 ELLAGVKAYISFIQSLAQFLGTDVSRVIRNALLQQTQPLDSCGEQTLTTLYTNWYLESLL 503
Query: 545 RRVSETQV 552
R+ S +
Sbjct: 504 RQASSGTI 511
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 111/180 (61%), Gaps = 7/180 (3%)
Query: 491 RAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV--AALYIQWYSEVL--LRR 546
+ ++N+ + V H+ VF + + ++ ++SH E + A +++ Y+ + R
Sbjct: 383 KLHLNLTELVLAMNHVHSFSVFEHTVFP-SEYLNSHLEARLNRAIVWLAGYNATTQEIAR 441
Query: 547 VSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYS 606
SE ++F++ ++ ++ D++RV NALLQQTQ +DS GE+T+ LY WY
Sbjct: 442 PSELLAGVKAYISFIQ--SLAQFLGTDVSRVIRNALLQQTQPLDSCGEQTLTTLYTNWYL 499
Query: 607 EVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
E LLR+ S+G I S +AF+SL EG F+AEEFSDV+E+RALA+L+GPYGMK L+E
Sbjct: 500 ESLLRQASSGTITLSPAMQAFISLPREGEQNFSAEEFSDVSEMRALAELLGPYGMKFLSE 559
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 76/107 (71%), Gaps = 4/107 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+ES +K I K
Sbjct: 839 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMESSLKYINK 898
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVYL 345
KFPNID+++ + + + +S+I++ L+ YY +FVD++ F+ V L
Sbjct: 899 KFPNIDVRNSTQHLGPVHREKSEIIRFLTNYYQSFVDVMEFRGLVDL 945
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACF 184
V E+ASAAG+ C +DPAL A+A+ KTD E+E+ +ACLL++F+AV +P LA + + F
Sbjct: 664 VFELASAAGVGCDIDPALVAAIANLKTDASSPEEEYKVACLLLIFLAVSLPLLATDPSSF 723
Query: 185 YLASLEGHSNNIHCMAR 201
Y +G+SNNIHC+ +
Sbjct: 724 YSIEKDGYSNNIHCLTK 740
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 33/40 (82%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM+H SD +F RLGQM+++Y+ P+KKL+EEF PH
Sbjct: 124 YNCAHEMLHGHSDPSFARLGQMVLEYDHPLKKLTEEFGPH 163
>gi|395516732|ref|XP_003762541.1| PREDICTED: ras-related protein Rab-43-like [Sarcophilus harrisii]
Length = 212
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 116/175 (66%), Gaps = 13/175 (7%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGSFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDI+ + +F + W+ E+ +YA ++++L+G
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILAYDITKKNSFLSMPHWIEEVRKYAGSSIVQLLIGNK 132
Query: 122 SGLKIVNE--------MASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMV 168
S L + E +A +LC ++ + A D ++++E +A LM+
Sbjct: 133 SDLSDLREVQLSEAQLLADRYEILCAIETS-----AKDSSNVEEAFVKVATELMM 182
>gi|66730539|ref|NP_001019502.1| ras-related protein Rab-43 [Rattus norvegicus]
gi|81887426|sp|Q53B90.1|RAB43_RAT RecName: Full=Ras-related protein Rab-43
gi|50898338|gb|AAT86135.1| Ras-related protein RAB43 [Rattus norvegicus]
Length = 210
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 111/164 (67%), Gaps = 13/164 (7%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 11 EHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIW 70
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDIS + TF + W+ ++ +YA ++++L+G
Sbjct: 71 DTAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNK 130
Query: 122 SGLKIVNEMASAAG--------LLCTVDPALATALASDKTDLDE 157
S L + E+ A +LC ++ + A D ++++E
Sbjct: 131 SDLADLREVPLAEAQSLAEHYDILCAIETS-----AKDSSNVEE 169
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 193 SNNIHCMARNKIDRED-REIPTEVGEDFAKRHDMY-YLETSAKASDNVEKLFMQIAAELM 250
SN + + NK D D RE+P + A+ +D+ +ETSAK S NVE+ F ++A EL+
Sbjct: 120 SNIVQLLIGNKSDLADLREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATELI 179
>gi|403268268|ref|XP_003926200.1| PREDICTED: ras-related protein Rab-43 [Saimiri boliviensis
boliviensis]
Length = 212
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 112/164 (68%), Gaps = 13/164 (7%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGTFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDI+ + +F + W+ ++ +YA ++++L+G
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIGDVRKYAGSNIVQLLIGNK 132
Query: 122 SGLKIVNEMASAAG--------LLCTVDPALATALASDKTDLDE 157
S L + E++ A +LC ++ + A D ++++E
Sbjct: 133 SDLSELREVSQAEAQRLAEHYDILCAIETS-----AKDSSNVEE 171
>gi|355706591|gb|AES02688.1| NCK-associated protein 1-like protein [Mustela putorius furo]
Length = 858
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 108/157 (68%)
Query: 392 KKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAP 451
K+ + +K E KPGAES+RK R +T MDKLH+ LTEL +N+ + V++ T P
Sbjct: 371 KQKQTPRKGEPERDKPGAESHRKNRCIVTNMDKLHLNLTELALTMNHVHSFSVFEHTIFP 430
Query: 452 REYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRV 511
EYL HLE+R +RA+V + +N T EIA+PSELLA V+AY++ +QT+ +V +D++RV
Sbjct: 431 SEYLSSHLEARLNRAIVWLAGYNATTQEIARPSELLAGVKAYISFIQTLAQFVGVDVSRV 490
Query: 512 FNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVS 548
NALLQQTQ +DS GE+T+ LY WY E LLR+ S
Sbjct: 491 IRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQAS 527
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 110/180 (61%), Gaps = 7/180 (3%)
Query: 491 RAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV--AALYIQWYSEVL--LRR 546
+ ++N+ + H+ VF + + ++ + SH E + A +++ Y+ + R
Sbjct: 403 KLHLNLTELALTMNHVHSFSVFEHTIFP-SEYLSSHLEARLNRAIVWLAGYNATTQEIAR 461
Query: 547 VSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYS 606
SE ++F++ T+ +V +D++RV NALLQQTQ +DS GE+T+ LY WY
Sbjct: 462 PSELLAGVKAYISFIQ--TLAQFVGVDVSRVIRNALLQQTQPLDSCGEQTITTLYTNWYL 519
Query: 607 EVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
E LLR+ S+G I S +AF+SL EG F+AEEFSD++E+RALA+L+GPYGMK L+E
Sbjct: 520 ESLLRQASSGTIILSPAMQAFISLPREGEQNFSAEEFSDISEMRALAELLGPYGMKFLSE 579
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 56/80 (70%), Gaps = 2/80 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACF 184
V E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + F
Sbjct: 684 VFELASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSLPLLATDPSSF 743
Query: 185 YLASLEGHSNNIHCMARNKI 204
Y +G++NNIHC+ + I
Sbjct: 744 YSIETDGYNNNIHCLTKAII 763
>gi|219805058|ref|NP_001137348.1| nck-associated protein 1-like [Bos taurus]
gi|296487947|tpg|DAA30060.1| TPA: NCK-associated protein 1-like [Bos taurus]
Length = 1134
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 103/147 (70%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPGAES+RK R +T MDKLH+ LTEL +N+ + V++ T P EYL HLE+RF+R
Sbjct: 660 KPGAESHRKNRSVVTNMDKLHLNLTELALTMNHVQSFSVFEHTIFPSEYLSSHLEARFNR 719
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
A+V + +N T EIA+PSELLA V+AY++ +Q++ ++ D++R+ NALLQQTQ +DS
Sbjct: 720 AIVWLAGYNATTQEIARPSELLAGVKAYISFIQSLAQFLGADVSRIIRNALLQQTQPLDS 779
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
GE+T+ LY WY E LLR+ S +
Sbjct: 780 SGEQTITTLYTNWYLESLLRQASSGTI 806
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 108/180 (60%), Gaps = 7/180 (3%)
Query: 491 RAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV--AALYIQWYSEVL--LRR 546
+ ++N+ + H+ VF + + ++ + SH E A +++ Y+ + R
Sbjct: 678 KLHLNLTELALTMNHVQSFSVFEHTIFP-SEYLSSHLEARFNRAIVWLAGYNATTQEIAR 736
Query: 547 VSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYS 606
SE ++F++ ++ ++ D++R+ NALLQQTQ +DS GE+T+ LY WY
Sbjct: 737 PSELLAGVKAYISFIQ--SLAQFLGADVSRIIRNALLQQTQPLDSSGEQTITTLYTNWYL 794
Query: 607 EVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
E LLR+ S+G I S +AF+SL EG F+AEEFSDV+E+RALA+L+GPYGMK L+E
Sbjct: 795 ESLLRQASSGTIILSPAMQAFISLPREGEQNFSAEEFSDVSEMRALAELLGPYGMKFLSE 854
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+ES +K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMESSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +S+I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKSEIIRYLTNYYQSFVDVMEFRDHVY 106
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ KTDL E+E+ +ACLL++F+AV +P LA + A FY
Sbjct: 961 ELASAAGVDCDIDPALVAAIANLKTDLSSPEEEYKVACLLLIFLAVSLPLLAMDAASFYS 1020
Query: 187 ASLEGHSNNIHCMARNKI 204
+G+SNNIHC+ + I
Sbjct: 1021 IEKDGYSNNIHCLTKAII 1038
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
FN AHEM+H SD +F RLGQM+++Y+ P+KKL+EEF PH
Sbjct: 158 FNCAHEMLHGHSDSSFARLGQMVLEYDHPLKKLTEEFGPH 197
>gi|114794557|pdb|2HUP|A Chain A, Crystal Structure Of Human Rab43 In Complex With Gdp
gi|114794558|pdb|2HUP|B Chain B, Crystal Structure Of Human Rab43 In Complex With Gdp
Length = 201
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 112/164 (68%), Gaps = 13/164 (7%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 24 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 83
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDI+ + +F + W+ ++ +YA ++++L+G
Sbjct: 84 DTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNK 143
Query: 122 SGLKIVNEMASAAG--------LLCTVDPALATALASDKTDLDE 157
S L + E++ A +LC ++ + A D ++++E
Sbjct: 144 SDLSELREVSLAEAQSLAEHYDILCAIETS-----AKDSSNVEE 182
>gi|307192561|gb|EFN75749.1| Ras-related protein Rab-43 [Harpegnathos saltator]
Length = 215
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/159 (50%), Positives = 107/159 (67%), Gaps = 4/159 (2%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK+VL+G+ G GKTC+V+RF G + QG TIGVDF +KTV I+ +R+KLQIW
Sbjct: 16 ENFDYLFKIVLIGDCGTGKTCVVQRFKSGTYVERQGNTIGVDFSMKTVLIDGKRVKLQIW 75
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ +I+VYDI+ + TF L W+ E+ Y S VL VLVG
Sbjct: 76 DTAGQERFRTITQSYYRSANGVIIVYDITKRSTFLNLQRWMEEVRRYTSSHVLLVLVGNK 135
Query: 122 SGLKIVNEM-ASAAGLLCTVDPA---LATALASDKTDLD 156
L+ + E+ A LC P + A D T++D
Sbjct: 136 CDLEDLREVKKEEAEALCEYLPEVLHIVETSAKDNTNID 174
>gi|50234889|ref|NP_940892.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|325910891|ref|NP_001191812.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|325910893|ref|NP_001191813.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|325910895|ref|NP_001191814.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|325910897|ref|NP_001191815.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|332261797|ref|XP_003279953.1| PREDICTED: ras-related protein Rab-43 isoform 1 [Nomascus
leucogenys]
gi|332261799|ref|XP_003279954.1| PREDICTED: ras-related protein Rab-43 isoform 2 [Nomascus
leucogenys]
gi|332261801|ref|XP_003279955.1| PREDICTED: ras-related protein Rab-43 isoform 3 [Nomascus
leucogenys]
gi|332817855|ref|XP_003339099.1| PREDICTED: ras-related protein Rab-43 [Pan troglodytes]
gi|332817859|ref|XP_003310046.1| PREDICTED: ras-related protein Rab-43 isoform 4 [Pan troglodytes]
gi|410037466|ref|XP_003950231.1| PREDICTED: ras-related protein Rab-43 [Pan troglodytes]
gi|426342028|ref|XP_004036318.1| PREDICTED: ras-related protein Rab-43 isoform 1 [Gorilla gorilla
gorilla]
gi|426342030|ref|XP_004036319.1| PREDICTED: ras-related protein Rab-43 isoform 2 [Gorilla gorilla
gorilla]
gi|74727944|sp|Q86YS6.1|RAB43_HUMAN RecName: Full=Ras-related protein Rab-43; AltName: Full=Ras-related
protein Rab-41
gi|27549389|gb|AAO17291.1| RAB43 [Homo sapiens]
gi|38382891|gb|AAH62319.1| RAB43, member RAS oncogene family [Homo sapiens]
gi|119599689|gb|EAW79283.1| hCG2022580, isoform CRA_f [Homo sapiens]
gi|158255464|dbj|BAF83703.1| unnamed protein product [Homo sapiens]
gi|383413231|gb|AFH29829.1| ras-related protein Rab-43 isoform a [Macaca mulatta]
gi|384941264|gb|AFI34237.1| ras-related protein Rab-43 isoform a [Macaca mulatta]
gi|410219510|gb|JAA06974.1| RAB43, member RAS oncogene family [Pan troglodytes]
gi|410251892|gb|JAA13913.1| RAB43, member RAS oncogene family [Pan troglodytes]
gi|410301460|gb|JAA29330.1| RAB43, member RAS oncogene family [Pan troglodytes]
gi|410331215|gb|JAA34554.1| RAB43, member RAS oncogene family [Pan troglodytes]
Length = 212
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 112/164 (68%), Gaps = 13/164 (7%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDI+ + +F + W+ ++ +YA ++++L+G
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNK 132
Query: 122 SGLKIVNEMASAAG--------LLCTVDPALATALASDKTDLDE 157
S L + E++ A +LC ++ + A D ++++E
Sbjct: 133 SDLSELREVSLAEAQSLAEHYDILCAIETS-----AKDSSNVEE 171
>gi|340379533|ref|XP_003388281.1| PREDICTED: ras-related protein Rab-30-like [Amphimedon
queenslandica]
Length = 212
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 73/120 (60%), Positives = 90/120 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y FLFK+VL+G+AGVGKT +VRR+T GVF TIGVDF IKT+ +N IKLQIWD
Sbjct: 4 EYDFLFKIVLIGDAGVGKTSIVRRYTDGVFTSAGIPTIGVDFCIKTLSVNGSAIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+ITQSYYRSA A++LVYDI TF L +WL E++ YA V ++L+G S
Sbjct: 64 TAGQERFRTITQSYYRSADAIVLVYDIGSATTFRNLPEWLSEVDRYAGTTVHKILIGNKS 123
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 202 NKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELME 251
NK DR DREI T +G FA+ +DM +LETSAK++DN++ LF Q+A L +
Sbjct: 121 NKSDRTDREIQTHLGSQFAQENDMPFLETSAKSADNIDNLFEQLAKTLRD 170
>gi|297263149|ref|XP_001094209.2| PREDICTED: ras-related protein Rab-43-like [Macaca mulatta]
Length = 270
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 112/164 (68%), Gaps = 13/164 (7%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDI+ + +F + W+ ++ +YA ++++L+G
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNK 132
Query: 122 SGLKIVNEMASAAG--------LLCTVDPALATALASDKTDLDE 157
S L + E++ A +LC ++ + A D ++++E
Sbjct: 133 SDLSELREVSLAEAQSLAEHYDILCAIETS-----AKDSSNVEE 171
>gi|86476069|ref|NP_001034483.1| ras-related protein Rab-43 isoform a [Mus musculus]
gi|81914382|sp|Q8CG50.1|RAB43_MOUSE RecName: Full=Ras-related protein Rab-43
gi|26986192|emb|CAD58914.1| Ras-related protein Rab [Mus musculus]
gi|112293049|dbj|BAF02902.1| Rab41 [Mus musculus]
gi|148666805|gb|EDK99221.1| RIKEN cDNA 1810048P08, isoform CRA_c [Mus musculus]
Length = 210
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 110/164 (67%), Gaps = 13/164 (7%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 11 EHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIW 70
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDIS + TF + W+ ++ +YA ++++L+G
Sbjct: 71 DTAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNK 130
Query: 122 SGLKIVNE--------MASAAGLLCTVDPALATALASDKTDLDE 157
S L E +A +LC ++ + A D ++++E
Sbjct: 131 SDLADFREVPLAEAQSLAEHYDILCAIETS-----AKDSSNVEE 169
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 193 SNNIHCMARNKIDRED-REIPTEVGEDFAKRHDMY-YLETSAKASDNVEKLFMQIAAELM 250
SN + + NK D D RE+P + A+ +D+ +ETSAK S NVE+ F ++A EL+
Sbjct: 120 SNIVQLLIGNKSDLADFREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATELI 179
>gi|426224321|ref|XP_004006320.1| PREDICTED: nck-associated protein 1-like [Ovis aries]
Length = 1134
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 103/147 (70%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPGAES+RK R +T MDKLH+ LTEL +N+ + V++ T P EYL HLE+RF+R
Sbjct: 660 KPGAESHRKNRSVVTNMDKLHLNLTELALTMNHVQSFSVFEHTIFPSEYLSSHLEARFNR 719
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
A+V + +N T EIA+PSELLA V+AY++ +Q++ ++ D++RV NALLQQTQ +DS
Sbjct: 720 AIVWLAGYNATTQEIARPSELLAGVKAYISFIQSLAQFLGADVSRVIRNALLQQTQPLDS 779
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
GE+T+ LY WY E LLR+ S +
Sbjct: 780 CGEQTITTLYTNWYLESLLRQASSGTI 806
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 108/180 (60%), Gaps = 7/180 (3%)
Query: 491 RAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV--AALYIQWYSEVL--LRR 546
+ ++N+ + H+ VF + + ++ + SH E A +++ Y+ + R
Sbjct: 678 KLHLNLTELALTMNHVQSFSVFEHTIFP-SEYLSSHLEARFNRAIVWLAGYNATTQEIAR 736
Query: 547 VSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYS 606
SE ++F++ ++ ++ D++RV NALLQQTQ +DS GE+T+ LY WY
Sbjct: 737 PSELLAGVKAYISFIQ--SLAQFLGADVSRVIRNALLQQTQPLDSCGEQTITTLYTNWYL 794
Query: 607 EVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
E LLR+ S+G I S +AF+SL EG F+AEEFSDV+E+RALA+L+GPYGMK L+E
Sbjct: 795 ESLLRQASSGTIIHSPVMQAFISLPREGEQNFSAEEFSDVSEMRALAELLGPYGMKFLSE 854
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+ES +K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMESSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +S+I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQHLGPVQREKSEIIRYLTNYYQSFVDVMEFRDHVY 106
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 78/144 (54%), Gaps = 30/144 (20%)
Query: 69 FRSITQSYYR---SAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSGLK 125
FR++ Q R SAH L+ I C L+ V + +K
Sbjct: 917 FRAMAQEGLREVFSAHCPFLMGPIEC----------------------LKEFVTPDTDIK 954
Query: 126 I---VNEMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARN 180
+ + E+ASAAG+ C +DPAL A+A+ KTDL E+E+ +ACLL++F+AV +P LA +
Sbjct: 955 VTLSIFELASAAGVDCDIDPALVAAIANLKTDLSSPEEEYKVACLLLIFLAVSLPLLAMD 1014
Query: 181 EACFYLASLEGHSNNIHCMARNKI 204
A FY +G+SNNIHC+ + I
Sbjct: 1015 AASFYSIEKDGYSNNIHCLTKAII 1038
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + FN AHEM+H SD +F RL QM+++Y+ P+K
Sbjct: 129 RSYLDLIVTYTSVILLLSRIEDRRVLIGMFNCAHEMLHGHSDSSFARLAQMVLEYDHPLK 188
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 189 KLTEEFGPH 197
>gi|395847163|ref|XP_003796253.1| PREDICTED: ras-related protein Rab-43 [Otolemur garnettii]
Length = 212
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 112/164 (68%), Gaps = 13/164 (7%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT++I +R+KLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLDIQGKRVKLQIW 72
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDI+ + +F + W+ ++ +YA ++++L+G
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNK 132
Query: 122 SGLKIVNEMASAAG--------LLCTVDPALATALASDKTDLDE 157
S L+ + E+ A +LC ++ + A D ++++E
Sbjct: 133 SDLRELREVTLAEAQSLAEHYDILCAIETS-----AKDSSNVEE 171
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 193 SNNIHCMARNKID-REDREIPTEVGEDFAKRHDMY-YLETSAKASDNVEKLFMQIAAELM 250
SN + + NK D RE RE+ + A+ +D+ +ETSAK S NVE+ F+++A EL+
Sbjct: 122 SNIVQLLIGNKSDLRELREVTLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELI 181
>gi|149728237|ref|XP_001488993.1| PREDICTED: ras-related protein Rab-43-like [Equus caballus]
Length = 212
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 112/164 (68%), Gaps = 13/164 (7%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDI+ + +F + W+ ++ +YA ++++L+G
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNK 132
Query: 122 SGLKIVNE--MASAAGL------LCTVDPALATALASDKTDLDE 157
S L + E +A A L LC ++ + A D ++++E
Sbjct: 133 SDLSELREVPLAEAQSLAEHYDILCAIETS-----AKDSSNVEE 171
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 7/73 (9%)
Query: 193 SNNIHCMARNKID-REDREIPTEVGEDFAKRHDMY-YLETSAKASDNVEKLFMQIAAELM 250
SN + + NK D E RE+P + A+ +D+ +ETSAK S NVE+ F+++A EL+
Sbjct: 122 SNIVQLLIGNKSDLSELREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFVRVATELV 181
Query: 251 EK-----LAEKLT 258
+ L+EK T
Sbjct: 182 VRHGGPLLSEKST 194
>gi|50754287|ref|XP_414313.1| PREDICTED: ras-related protein Rab-43 [Gallus gallus]
Length = 215
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 71/129 (55%), Positives = 97/129 (75%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VL+G+A VGKTCLV+RF G F QG+TIGVDF +K++EI +R+KLQIW
Sbjct: 15 ESYDFLFKLVLIGDASVGKTCLVQRFKTGAFAERQGSTIGVDFTMKSLEIQGKRVKLQIW 74
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDIS + +F + W+ ++ +YA ++++L+G
Sbjct: 75 DTAGQERFRTITQSYYRSANGAILAYDISKRGSFLSIPRWIEDVRKYAGSNIVQLLIGNK 134
Query: 122 SGLKIVNEM 130
S L + E+
Sbjct: 135 SDLSDLREV 143
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 193 SNNIHCMARNKIDRED-REIPTEVGEDFAKRHD--MYYLETSAKASDNVEKLFMQIAAEL 249
SN + + NK D D RE+ E + A+R+D + +ETSAK S NVE+ F+++A EL
Sbjct: 124 SNIVQLLIGNKSDLSDLREVQLEEAQSLAERYDNIICAIETSAKDSSNVEEAFVKMATEL 183
Query: 250 M 250
M
Sbjct: 184 M 184
>gi|332018505|gb|EGI59095.1| Ras-related protein Rab-43 [Acromyrmex echinatior]
Length = 212
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/159 (50%), Positives = 107/159 (67%), Gaps = 4/159 (2%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E + +LFK+VL+G+ G GKTC+V+RF G F G TIGVDF +KTV I+ +R+KLQIW
Sbjct: 8 ESFDYLFKIVLIGDCGTGKTCVVQRFRSGTFVERHGNTIGVDFTMKTVLIDGKRVKLQIW 67
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ +I+VYDI+ + TF L W+ E+ Y+S VL VLVG
Sbjct: 68 DTAGQERFRTITQSYYRSANGVIVVYDITKRSTFLSLQRWVEEVRRYSSSHVLLVLVGNK 127
Query: 122 SGLKIVNEMAS-AAGLLCTVDPALATAL---ASDKTDLD 156
L+ + E+ A LC P + + A D T++D
Sbjct: 128 CDLEDLREVKEIEAEALCQYLPEVLHVVETSAKDNTNID 166
>gi|348553989|ref|XP_003462808.1| PREDICTED: ras-related protein Rab-43-like [Cavia porcellus]
Length = 210
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 112/164 (68%), Gaps = 13/164 (7%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 11 EQYDFLFKLVLVGDASVGKTCVVQRFKTGTFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 70
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDI+ + TF + W+ ++ +YA ++++L+G
Sbjct: 71 DTAGQERFRTITQSYYRSANGAILAYDITKRSTFLSVPHWIEDVRKYAGSSIVQLLIGNK 130
Query: 122 SGLKIVNE--MASAAGL------LCTVDPALATALASDKTDLDE 157
S L + E +A A L LC ++ + A D ++++E
Sbjct: 131 SDLAELREVQLAEAQSLAKHYDILCAIETS-----AKDASNVEE 169
>gi|344275963|ref|XP_003409780.1| PREDICTED: ras-related protein Rab-43-like [Loxodonta africana]
Length = 212
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 112/164 (68%), Gaps = 13/164 (7%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG TIGVDF +KT+EI +R+KLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGNTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDI+ + +F + +W+ ++ +YA ++++L+G
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPNWIEDVRKYAGSNIVQLLIGNK 132
Query: 122 SGLKIVNE--MASAAGL------LCTVDPALATALASDKTDLDE 157
S L + E +A A L LC ++ + A D ++++E
Sbjct: 133 SDLGELREVPLAEAQSLAEHYDILCAIETS-----AKDSSNVEE 171
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 193 SNNIHCMARNKID-REDREIPTEVGEDFAKRHDMY-YLETSAKASDNVEKLFMQIAAELM 250
SN + + NK D E RE+P + A+ +D+ +ETSAK S NVE+ F+++A EL+
Sbjct: 122 SNIVQLLIGNKSDLGELREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELI 181
>gi|355714954|gb|AES05174.1| ras-related protein Rab-43-like protein [Mustela putorius furo]
Length = 211
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 112/164 (68%), Gaps = 13/164 (7%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDI+ + +F + W+ ++ +YA ++++L+G
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNK 132
Query: 122 SGLKIVNE--MASAAGL------LCTVDPALATALASDKTDLDE 157
S L + E +A A L LC ++ + A D ++++E
Sbjct: 133 SDLGELREVPLAEAQSLAEHYDILCAIETS-----AKDSSNVEE 171
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 7/73 (9%)
Query: 193 SNNIHCMARNKID-REDREIPTEVGEDFAKRHDMY-YLETSAKASDNVEKLFMQIAAELM 250
SN + + NK D E RE+P + A+ +D+ +ETSAK S NVE+ F+++A EL+
Sbjct: 122 SNIVQLLIGNKSDLGELREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFVRVATELV 181
Query: 251 EK-----LAEKLT 258
+ L+EK T
Sbjct: 182 VRHGGPLLSEKGT 194
>gi|327265909|ref|XP_003217750.1| PREDICTED: ras-related protein Rab-43-like [Anolis carolinensis]
Length = 221
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/129 (55%), Positives = 96/129 (74%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VL+G+A VGKTCLV+RF G F QG TIGVDF +K++EI +R+KLQIW
Sbjct: 22 ERYDFLFKLVLIGDASVGKTCLVQRFKTGAFAERQGNTIGVDFTMKSLEIQGKRVKLQIW 81
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDIS + +F + W+ ++ +YA ++++L+G
Sbjct: 82 DTAGQERFRTITQSYYRSANGAILAYDISKRSSFQSIPRWIEDVRKYAGSNIVQLLIGNK 141
Query: 122 SGLKIVNEM 130
S L + E+
Sbjct: 142 SDLSDLREV 150
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 193 SNNIHCMARNKIDRED-REIPTEVGEDFAKRHDMY-YLETSAKASDNVEKLFMQIAAELM 250
SN + + NK D D RE+ E + A+R+D+ +ETSAK S NVE+ F+++A ELM
Sbjct: 131 SNIVQLLIGNKSDLSDLREVQLEEAQSLAERYDITCAIETSAKDSSNVEEAFVKMATELM 190
>gi|359322066|ref|XP_003639768.1| PREDICTED: ras-related protein Rab-43-like [Canis lupus familiaris]
Length = 212
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 112/164 (68%), Gaps = 13/164 (7%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDI+ + +F + W+ ++ +YA ++++L+G
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNK 132
Query: 122 SGLKIVNE--MASAAGL------LCTVDPALATALASDKTDLDE 157
S L + E +A A L LC ++ + A D ++++E
Sbjct: 133 SDLGQLREVPLAEAQSLAEHYDILCAIETS-----AKDSSNVEE 171
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 7/73 (9%)
Query: 193 SNNIHCMARNKID-REDREIPTEVGEDFAKRHDMY-YLETSAKASDNVEKLFMQIAAELM 250
SN + + NK D + RE+P + A+ +D+ +ETSAK S NVE+ F+++A EL+
Sbjct: 122 SNIVQLLIGNKSDLGQLREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFVRVATELV 181
Query: 251 EK-----LAEKLT 258
+ L+EK T
Sbjct: 182 VRHGGPLLSEKGT 194
>gi|47209067|emb|CAF90248.1| unnamed protein product [Tetraodon nigroviridis]
Length = 176
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/90 (75%), Positives = 82/90 (91%)
Query: 30 GVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAGQERFRSITQSYYRSAHALILVYDI 89
G+FPPGQGATIGVDFMIKTVEI E++KLQIWDTAGQERFRSITQSYYRSA+ALIL YDI
Sbjct: 6 GLFPPGQGATIGVDFMIKTVEIKGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDI 65
Query: 90 SCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
+C+ +F CL +WL+EIE+YA+ +V+ +LVG
Sbjct: 66 TCEDSFRCLPEWLKEIEQYANNQVVTILVG 95
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 11/81 (13%)
Query: 173 CIPKLARNEACFYLASLEGHSNN--IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLE 229
C+P+ +L +E ++NN + + NKID E RE+ + EDFA+ M YLE
Sbjct: 73 CLPE--------WLKEIEQYANNQVVTILVGNKIDLAEKREVVRQRAEDFAQSQSMLYLE 124
Query: 230 TSAKASDNVEKLFMQIAAELM 250
TSAK SDNVEKLF+ +A EL+
Sbjct: 125 TSAKESDNVEKLFLDLACELI 145
>gi|410907910|ref|XP_003967434.1| PREDICTED: ras-related protein Rab-19-like [Takifugu rubripes]
Length = 384
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 97/124 (78%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ + FLFK++LVG++ VGKTC+V+ F G+F Q TIGVDF ++T++I+ +++K+Q+W
Sbjct: 177 DSFDFLFKIILVGDSNVGKTCVVQSFKSGIFMEKQQNTIGVDFTVRTLDIDGKKVKMQVW 236
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAH ++ YDI+ +PTF+ ++ W+RE+E Y + V+ +L+G
Sbjct: 237 DTAGQERFRTITQSYYRSAHGAMVAYDITRRPTFESVSHWIREVEHYGAASVVLILIGNK 296
Query: 122 SGLK 125
S L+
Sbjct: 297 SDLQ 300
>gi|395540868|ref|XP_003772372.1| PREDICTED: nck-associated protein 1-like [Sarcophilus harrisii]
Length = 1134
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 107/161 (66%)
Query: 392 KKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAP 451
K + +KK E KPGAES+RK R +T MDKLH+ LTEL +N+ ++ V++ T P
Sbjct: 646 KHKQTSKKGEPERDKPGAESHRKNRSVVTNMDKLHLTLTELALTMNHVHSLSVFEHTIFP 705
Query: 452 REYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRV 511
EYL HLE R +RA+V + +N T EIA+PSE+LA V+AY+ +Q++ + +D++RV
Sbjct: 706 SEYLSSHLEERLNRAVVWLAGYNATTQEIARPSEVLAGVKAYIGFIQSLTQLLGVDVSRV 765
Query: 512 FNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
NALLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 766 IRNALLQQTQPLDSSGEQTITTLYTNWYLESLLRQASSGTI 806
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 102/166 (61%), Gaps = 7/166 (4%)
Query: 505 HIDMTRVFNNALLQQTQRMDSHGEKTV--AALYIQWYSEVL--LRRVSETQVKSLNLLNF 560
H+ VF + + ++ + SH E+ + A +++ Y+ + R SE + F
Sbjct: 692 HVHSLSVFEHTIFP-SEYLSSHLEERLNRAVVWLAGYNATTQEIARPSEVLAGVKAYIGF 750
Query: 561 LRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICF 620
++ T + +D++RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S+G I
Sbjct: 751 IQSLT--QLLGVDVSRVIRNALLQQTQPLDSSGEQTITTLYTNWYLESLLRQASSGTIIL 808
Query: 621 SLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
S +AF+S+ EG F+AEEFSD++E+RALA+L+GPYGMK L+E
Sbjct: 809 SPAMQAFISIPREGEQSFSAEEFSDISEMRALAELLGPYGMKFLSE 854
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M +A+ KL EKLTI++DRG G+L RIYNIKK C D KSKP FL +KS+ES +K I K
Sbjct: 1 MSMASCYQHKLTEKLTILNDRGRGVLIRIYNIKKTCSDPKSKPPFLLEKSMESSVKYISK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID++S + + + +++IV+ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRSSTQHLGPVHRDKTEIVRFLTSYYQSFVDVMEFRDHVY 106
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 56/80 (70%), Gaps = 2/80 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACF 184
V E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV IP LA + + F
Sbjct: 959 VFELASAAGVCCDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSIPLLATDSSSF 1018
Query: 185 YLASLEGHSNNIHCMARNKI 204
Y +G++NNIHC+ + I
Sbjct: 1019 YSIEKDGYNNNIHCLTKAII 1038
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L ++ + +N A EM SD +F RLGQM+++Y+ P+K
Sbjct: 129 RSYLDLIVTYTSVILLLSRIEDRKVLIGMYNCAFEMTQGHSDPSFARLGQMVLEYDHPLK 188
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 189 KLTEEFGPH 197
>gi|281342189|gb|EFB17773.1| hypothetical protein PANDA_012628 [Ailuropoda melanoleuca]
Length = 1131
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 107/157 (68%)
Query: 392 KKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAP 451
K+ + +K E KPGAES+RK R +T MDKLH+ LTEL +N+ + V++ T P
Sbjct: 650 KQKQTPRKGEPERDKPGAESHRKNRSIVTNMDKLHLNLTELALTMNHVHSFSVFEHTIFP 709
Query: 452 REYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRV 511
EYL HLE+R +RA+V + +N T EIA+PSELLA V+AY++ +Q++ +V D++RV
Sbjct: 710 SEYLSSHLEARLNRAIVWLAGYNATTQEIARPSELLAGVKAYVSFIQSLAQFVGADVSRV 769
Query: 512 FNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVS 548
NALLQQTQ +DS GE+T+ LY WY E LLR+ S
Sbjct: 770 IRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQAS 806
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 108/180 (60%), Gaps = 7/180 (3%)
Query: 491 RAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV--AALYIQWYSEVL--LRR 546
+ ++N+ + H+ VF + + ++ + SH E + A +++ Y+ + R
Sbjct: 682 KLHLNLTELALTMNHVHSFSVFEHTIFP-SEYLSSHLEARLNRAIVWLAGYNATTQEIAR 740
Query: 547 VSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYS 606
SE ++F++ ++ +V D++RV NALLQQTQ +DS GE+T+ LY WY
Sbjct: 741 PSELLAGVKAYVSFIQ--SLAQFVGADVSRVIRNALLQQTQPLDSCGEQTITTLYTNWYL 798
Query: 607 EVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
E LLR+ S G I S +AF+SL EG F+AEEFSD++E+RALA+L+GPYGMK L+E
Sbjct: 799 ESLLRQASGGTIILSPAMQAFISLPREGEQNFSAEEFSDISEMRALAELLGPYGMKFLSE 858
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 75/106 (70%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G L R+YNIKK C D KSKP FL +KS+ES +K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGALIRMYNIKKTCSDPKSKPPFLLEKSMESSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFP ID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPTIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 106
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL +F+AV +P LA + + FY
Sbjct: 965 ELASAAGVGCDIDPALVAAIANLKADASSPEEEYKVACLLSIFLAVSLPLLAADPSSFYS 1024
Query: 187 ASLEGHSNNIHCMARNKI 204
+G++NNIHC+ + I
Sbjct: 1025 IEKDGYNNNIHCLTKAII 1042
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 35/47 (74%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSMRPMR 718
+N AHEM+H SD +F RLGQM+++Y+ P+KKL+EEF PH +R
Sbjct: 158 YNCAHEMLHGHSDPSFARLGQMVLEYDHPLKKLTEEFGPHTKASSLR 204
>gi|301776136|ref|XP_002923491.1| PREDICTED: nck-associated protein 1-like [Ailuropoda melanoleuca]
Length = 1134
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 107/157 (68%)
Query: 392 KKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAP 451
K+ + +K E KPGAES+RK R +T MDKLH+ LTEL +N+ + V++ T P
Sbjct: 646 KQKQTPRKGEPERDKPGAESHRKNRSIVTNMDKLHLNLTELALTMNHVHSFSVFEHTIFP 705
Query: 452 REYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRV 511
EYL HLE+R +RA+V + +N T EIA+PSELLA V+AY++ +Q++ +V D++RV
Sbjct: 706 SEYLSSHLEARLNRAIVWLAGYNATTQEIARPSELLAGVKAYVSFIQSLAQFVGADVSRV 765
Query: 512 FNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVS 548
NALLQQTQ +DS GE+T+ LY WY E LLR+ S
Sbjct: 766 IRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQAS 802
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 108/180 (60%), Gaps = 7/180 (3%)
Query: 491 RAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV--AALYIQWYSEVL--LRR 546
+ ++N+ + H+ VF + + ++ + SH E + A +++ Y+ + R
Sbjct: 678 KLHLNLTELALTMNHVHSFSVFEHTIFP-SEYLSSHLEARLNRAIVWLAGYNATTQEIAR 736
Query: 547 VSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYS 606
SE ++F++ ++ +V D++RV NALLQQTQ +DS GE+T+ LY WY
Sbjct: 737 PSELLAGVKAYVSFIQ--SLAQFVGADVSRVIRNALLQQTQPLDSCGEQTITTLYTNWYL 794
Query: 607 EVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
E LLR+ S G I S +AF+SL EG F+AEEFSD++E+RALA+L+GPYGMK L+E
Sbjct: 795 ESLLRQASGGTIILSPAMQAFISLPREGEQNFSAEEFSDISEMRALAELLGPYGMKFLSE 854
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 75/106 (70%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G L R+YNIKK C D KSKP FL +KS+ES +K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGALIRMYNIKKTCSDPKSKPPFLLEKSMESSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFP ID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPTIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 106
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL +F+AV +P LA + + FY
Sbjct: 961 ELASAAGVGCDIDPALVAAIANLKADASSPEEEYKVACLLSIFLAVSLPLLAADPSSFYS 1020
Query: 187 ASLEGHSNNIHCMARNKI 204
+G++NNIHC+ + I
Sbjct: 1021 IEKDGYNNNIHCLTKAII 1038
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 33/40 (82%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM+H SD +F RLGQM+++Y+ P+KKL+EEF PH
Sbjct: 158 YNCAHEMLHGHSDPSFARLGQMVLEYDHPLKKLTEEFGPH 197
>gi|417515719|gb|JAA53672.1| nck-associated protein 1-like protein [Sus scrofa]
Length = 1134
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 110/161 (68%)
Query: 392 KKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAP 451
K+ + +K E KPGAES+RK R +T MDKLH+ LTEL A+N+ + V++ T P
Sbjct: 646 KQRQTPRKGEPERDKPGAESHRKNRSIVTNMDKLHLNLTELVLAMNHVHSFSVFEHTVFP 705
Query: 452 REYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRV 511
EYL+ HLE+R +RA+V + +N T EIA+PSELLA V+AY++ +Q++ ++ D++RV
Sbjct: 706 SEYLNSHLEARLNRAIVWLAGYNATTQEIARPSELLAGVKAYISFIQSLAQFLGTDVSRV 765
Query: 512 FNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
NALLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 766 IRNALLQQTQPLDSCGEQTLTTLYTNWYLESLLRQASSGTI 806
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 111/180 (61%), Gaps = 7/180 (3%)
Query: 491 RAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV--AALYIQWYSEVL--LRR 546
+ ++N+ + V H+ VF + + ++ ++SH E + A +++ Y+ + R
Sbjct: 678 KLHLNLTELVLAMNHVHSFSVFEHTVFP-SEYLNSHLEARLNRAIVWLAGYNATTQEIAR 736
Query: 547 VSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYS 606
SE ++F++ ++ ++ D++RV NALLQQTQ +DS GE+T+ LY WY
Sbjct: 737 PSELLAGVKAYISFIQ--SLAQFLGTDVSRVIRNALLQQTQPLDSCGEQTLTTLYTNWYL 794
Query: 607 EVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
E LLR+ S+G I S +AF+SL EG F+AEEFSDV+E+RALA+L+GPYGMK L+E
Sbjct: 795 ESLLRQASSGTITLSPAMQAFISLPREGEQNFSAEEFSDVSEMRALAELLGPYGMKFLSE 854
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+ES +K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMESSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +S+I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKSEIIRFLTNYYQSFVDVMEFRDHVY 106
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACF 184
V E+ASAAG+ C +DPAL A+A+ KTD E+E+ +ACLL++F+AV +P LA + + F
Sbjct: 959 VFELASAAGVGCDIDPALVAAIANLKTDASSPEEEYKVACLLLIFLAVSLPLLATDPSSF 1018
Query: 185 YLASLEGHSNNIHCMAR 201
Y +G+SNNIHC+ +
Sbjct: 1019 YSIEKDGYSNNIHCLTK 1035
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 33/40 (82%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM+H SD +F RLGQM+++Y+ P+KKL+EEF PH
Sbjct: 158 YNCAHEMLHGHSDPSFARLGQMVLEYDHPLKKLTEEFGPH 197
>gi|334342428|ref|XP_001378446.2| PREDICTED: ras-related protein Rab-43-like [Monodelphis domestica]
Length = 210
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 116/175 (66%), Gaps = 13/175 (7%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 11 EQYDFLFKLVLVGDASVGKTCVVQRFKTGSFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 70
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDI+ + +F + W+ ++ +YA ++++L+G
Sbjct: 71 DTAGQERFRTITQSYYRSANGAILAYDITKKSSFLSVPHWIEDVRKYAGSNIVQLLIGNK 130
Query: 122 SGLKIVNE--------MASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMV 168
S L + E +A +LC ++ + A D ++++E +A LM+
Sbjct: 131 SDLSDLREVQLSEAQSLAEHYEILCAIETS-----AKDSSNVEEAFVKVATELMM 180
>gi|260809960|ref|XP_002599772.1| hypothetical protein BRAFLDRAFT_113929 [Branchiostoma floridae]
gi|229285054|gb|EEN55784.1| hypothetical protein BRAFLDRAFT_113929 [Branchiostoma floridae]
Length = 217
Score = 157 bits (396), Expect = 2e-35, Method: Composition-based stats.
Identities = 76/167 (45%), Positives = 112/167 (67%), Gaps = 3/167 (1%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ + FLFK+VL+G+AGVGKTC+V+RF G + G+TIGVDF +KTV I+++R+KLQ+W
Sbjct: 15 DGFDFLFKIVLIGDAGVGKTCVVQRFKSGTYMERCGSTIGVDFTMKTVTIDDKRVKLQVW 74
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ +I+ YDI+ + TFD WL ++++YA V++ LVG
Sbjct: 75 DTAGQERFRTITQSYYRSANGVIIAYDITKKETFDNAVRWLEDVKKYAGPNVVKQLVGCK 134
Query: 122 SGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMV 168
L+ + E+ V + AL +T ED ++ C + +
Sbjct: 135 RDLEEMREVNVTEAKSFAVQNCMFDAL---ETSAKEDTNIEECFIRI 178
>gi|410964619|ref|XP_003988851.1| PREDICTED: nck-associated protein 1-like [Felis catus]
Length = 1134
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 106/157 (67%)
Query: 392 KKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAP 451
K+ + +K E KPGAES+RK R +T MDKLH+ LTEL +N+ + V++ T P
Sbjct: 646 KQRQTPRKGEPERDKPGAESHRKNRSVVTNMDKLHLNLTELALTMNHVHSFSVFEHTIFP 705
Query: 452 REYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRV 511
EYL HLE+R +RA+V + +N T EIA+PSELLA V+AY+ +Q++ +V D++RV
Sbjct: 706 SEYLSSHLEARLNRAIVWLAGYNATTQEIARPSELLAGVKAYVGFIQSLAQFVGADVSRV 765
Query: 512 FNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVS 548
NALLQQTQ +DS GE+T+ LY WY E LLR+ S
Sbjct: 766 IRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQAS 802
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 107/180 (59%), Gaps = 7/180 (3%)
Query: 491 RAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV--AALYIQWYSEVL--LRR 546
+ ++N+ + H+ VF + + ++ + SH E + A +++ Y+ + R
Sbjct: 678 KLHLNLTELALTMNHVHSFSVFEHTIFP-SEYLSSHLEARLNRAIVWLAGYNATTQEIAR 736
Query: 547 VSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYS 606
SE + F++ ++ +V D++RV NALLQQTQ +DS GE+T+ LY WY
Sbjct: 737 PSELLAGVKAYVGFIQ--SLAQFVGADVSRVIRNALLQQTQPLDSCGEQTITTLYTNWYL 794
Query: 607 EVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
E LLR+ S G I S +AF+SL EG F+AEEFSD++E+RALA+L+GPYGMK L+E
Sbjct: 795 ESLLRQASGGTIILSPAMQAFISLPREGEQNFSAEEFSDISEMRALAELLGPYGMKFLSE 854
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 75/106 (70%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+E +K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMEPSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID++S + + + +S+I++ L YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRSSTQHLGPVHREKSEIIRFLINYYQSFVDVMEFRDHVY 106
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + FY
Sbjct: 961 ELASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSLPLLAADPSSFYS 1020
Query: 187 ASLEGHSNNIHCMARNKI 204
+G++NNIHC+ + I
Sbjct: 1021 IEKDGYNNNIHCLTKAII 1038
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 33/40 (82%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM+H SD +F RLGQM+++Y+ P+KKL+EEF PH
Sbjct: 158 YNCAHEMLHGHSDPSFARLGQMVLEYDHPLKKLTEEFGPH 197
>gi|148671969|gb|EDL03916.1| NCK associated protein 1 like, isoform CRA_c [Mus musculus]
Length = 779
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 115/184 (62%), Gaps = 6/184 (3%)
Query: 367 LNEIIKPG--AESYRKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDK 424
LNE + P A + K + + + R+ K E KPGAES+RK R +T MDK
Sbjct: 268 LNEQLLPKHCATTISKAKNKKSMKQRQAPRKGEP----ERDKPGAESHRKNRSLVTNMDK 323
Query: 425 LHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPS 484
LH+ LTEL A+N+ + V++ T P EYL HLE+R +RA+V + +N T EI +PS
Sbjct: 324 LHLNLTELALAMNHVHSFSVFEHTIFPSEYLSSHLEARLNRAIVTLAGYNATTQEILRPS 383
Query: 485 ELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLL 544
ELLA V+AY++ +Q++ ++ D +R+ NALLQQTQ +DS GE+TV LY WY E LL
Sbjct: 384 ELLAGVKAYISFIQSLAQFLGADASRIVRNALLQQTQPLDSSGEQTVTTLYTNWYLESLL 443
Query: 545 RRVS 548
R+ S
Sbjct: 444 RQAS 447
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Query: 112 KVLRVLVGGTSGLKI---VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLL 166
+ L+ V + +K+ V E+A AAG+ C +DPAL A+A+ K D E+E+ +ACLL
Sbjct: 586 ECLKEFVTPDTDIKVTLSVFELACAAGVSCDIDPALVAAIANLKADNSSPEEEYKVACLL 645
Query: 167 MVFVAVCIPKLARNEACFYLASLEGHSNNIHCMARNKI 204
++F+AV +P LA + + F+ +G++NNIHC+ + I
Sbjct: 646 LIFLAVSLPLLATDPSSFFSIEKDGYNNNIHCLTKAII 683
>gi|307170291|gb|EFN62646.1| Ras-related protein Rab-43 [Camponotus floridanus]
Length = 223
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 107/159 (67%), Gaps = 4/159 (2%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E + +LFK+VL+G+ G GKTC+V+RF G F G TIGVDF +KTV I+ +RIKLQIW
Sbjct: 18 ERFDYLFKIVLIGDCGTGKTCVVQRFRSGTFVERHGNTIGVDFTMKTVLIDGKRIKLQIW 77
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYR A+ +I+VYDI+ + TF L W+ E+ Y+S VL VLVG
Sbjct: 78 DTAGQERFRTITQSYYRCANGVIVVYDITKRSTFLSLQRWVEEVRRYSSSHVLLVLVGNK 137
Query: 122 SGLKIVNEMASA-AGLLCTVDPALATAL---ASDKTDLD 156
L+ + E+ A A LC P + + A D T++D
Sbjct: 138 CDLENLREVQKAEAEALCEYLPEVLHVVETSAKDNTNID 176
>gi|149508711|ref|XP_001511266.1| PREDICTED: nck-associated protein 1, partial [Ornithorhynchus
anatinus]
Length = 471
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/143 (52%), Positives = 101/143 (70%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPGAES+RK R +TTMDKLH LTEL ++N+ T+ V++ T P EYL HLESR +R
Sbjct: 295 KPGAESHRKNRSIVTTMDKLHQTLTELSQSMNHATSFTVFEHTIYPSEYLSSHLESRLNR 354
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
A+V + +N T EIA+PSE+LA V+AY+ +Q++ ++ D TRV +ALLQQTQ +DS
Sbjct: 355 AIVWLAGYNATTQEIARPSEVLAGVKAYVGFIQSLAQFLGADATRVIRSALLQQTQPLDS 414
Query: 526 HGEKTVAALYIQWYSEVLLRRVS 548
GE+T+ LY WY E LLR+ S
Sbjct: 415 AGEQTITTLYTNWYLESLLRQAS 437
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 563 VYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSL 622
+ ++ ++ D TRV +ALLQQTQ +DS GE+T+ LY WY E LLR+ S G I S
Sbjct: 386 IQSLAQFLGADATRVIRSALLQQTQPLDSAGEQTITTLYTNWYLESLLRQASGGTIILSP 445
Query: 623 NQRAFVSLTA-EGAIPFNAEEFSDVN 647
+AF+S+ EG F+AEEFSDV+
Sbjct: 446 AIQAFMSIPPREGESTFSAEEFSDVS 471
>gi|148671968|gb|EDL03915.1| NCK associated protein 1 like, isoform CRA_b [Mus musculus]
Length = 1153
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 116/188 (61%), Gaps = 6/188 (3%)
Query: 367 LNEIIKPG--AESYRKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDK 424
LNE + P A + K + + + R+ K E KPGAES+RK R +T MDK
Sbjct: 642 LNEQLLPKHCATTISKAKNKKSMKQRQAPRKGEP----ERDKPGAESHRKNRSLVTNMDK 697
Query: 425 LHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPS 484
LH+ LTEL A+N+ + V++ T P EYL HLE+R +RA+V + +N T EI +PS
Sbjct: 698 LHLNLTELALAMNHVHSFSVFEHTIFPSEYLSSHLEARLNRAIVTLAGYNATTQEILRPS 757
Query: 485 ELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLL 544
ELLA V+AY++ +Q++ ++ D +R+ NALLQQTQ +DS GE+TV LY WY E LL
Sbjct: 758 ELLAGVKAYISFIQSLAQFLGADASRIVRNALLQQTQPLDSSGEQTVTTLYTNWYLESLL 817
Query: 545 RRVSETQV 552
R+ S +
Sbjct: 818 RQASSGAI 825
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 79/106 (74%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D+KSKP FL +KS+ESC+K I K
Sbjct: 20 MSLTSAYQLKLAEKLTILNDRGQGVLIRMYNIKKTCSDSKSKPPFLLEKSMESCLKYINK 79
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 80 KFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 125
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Query: 112 KVLRVLVGGTSGLKI---VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLL 166
+ L+ V + +K+ V E+A AAG+ C +DPAL A+A+ K D E+E+ +ACLL
Sbjct: 960 ECLKEFVTPDTDIKVTLSVFELACAAGVSCDIDPALVAAIANLKADNSSPEEEYKVACLL 1019
Query: 167 MVFVAVCIPKLARNEACFYLASLEGHSNNIHCMARNKI 204
++F+AV +P LA + + F+ +G++NNIHC+ + I
Sbjct: 1020 LIFLAVSLPLLATDPSSFFSIEKDGYNNNIHCLTKAII 1057
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + +N AHEM+H SD +F RLGQM+++Y+ P+K
Sbjct: 148 RSYLDLIVTYTSVILLLSRIEDRRILIGMYNCAHEMLHGHSDPSFARLGQMVLEYDHPLK 207
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 208 KLTEEFGPH 216
>gi|380025950|ref|XP_003696725.1| PREDICTED: ras-related protein Rab-43-like [Apis florea]
Length = 219
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 108/159 (67%), Gaps = 4/159 (2%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK+VL+G+ G GKTC+V+RF G F G TIGVDF +KTV I+++++KLQIW
Sbjct: 15 ENFDYLFKIVLIGDCGTGKTCVVQRFRSGTFIERHGNTIGVDFSMKTVLIDDKKVKLQIW 74
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ +I+VYDI+ + TF L W+ E+ Y S VL +LVG
Sbjct: 75 DTAGQERFRTITQSYYRSANGVIVVYDITKRSTFLSLQHWVEEVRRYTSSHVLLILVGNK 134
Query: 122 SGLKIVNEMASA-AGLLCTVDPALATAL---ASDKTDLD 156
L+ + E+ A LC P + + A + T++D
Sbjct: 135 CDLESLREVEKGEAEALCQYLPEVLQVVETSAKENTNID 173
>gi|148671970|gb|EDL03917.1| NCK associated protein 1 like, isoform CRA_d [Mus musculus]
Length = 695
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 116/188 (61%), Gaps = 6/188 (3%)
Query: 367 LNEIIKPG--AESYRKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDK 424
LNE + P A + K + + + R+ K E KPGAES+RK R +T MDK
Sbjct: 184 LNEQLLPKHCATTISKAKNKKSMKQRQAPRKGEP----ERDKPGAESHRKNRSLVTNMDK 239
Query: 425 LHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPS 484
LH+ LTEL A+N+ + V++ T P EYL HLE+R +RA+V + +N T EI +PS
Sbjct: 240 LHLNLTELALAMNHVHSFSVFEHTIFPSEYLSSHLEARLNRAIVTLAGYNATTQEILRPS 299
Query: 485 ELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLL 544
ELLA V+AY++ +Q++ ++ D +R+ NALLQQTQ +DS GE+TV LY WY E LL
Sbjct: 300 ELLAGVKAYISFIQSLAQFLGADASRIVRNALLQQTQPLDSSGEQTVTTLYTNWYLESLL 359
Query: 545 RRVSETQV 552
R+ S +
Sbjct: 360 RQASSGAI 367
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Query: 112 KVLRVLVGGTSGLKI---VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLL 166
+ L+ V + +K+ V E+A AAG+ C +DPAL A+A+ K D E+E+ +ACLL
Sbjct: 502 ECLKEFVTPDTDIKVTLSVFELACAAGVSCDIDPALVAAIANLKADNSSPEEEYKVACLL 561
Query: 167 MVFVAVCIPKLARNEACFYLASLEGHSNNIHCMARNKI 204
++F+AV +P LA + + F+ +G++NNIHC+ + I
Sbjct: 562 LIFLAVSLPLLATDPSSFFSIEKDGYNNNIHCLTKAII 599
>gi|23943795|ref|NP_705725.1| nck-associated protein 1-like [Mus musculus]
gi|22478105|gb|AAH37096.1| NCK associated protein 1 like [Mus musculus]
gi|26350517|dbj|BAC38898.1| unnamed protein product [Mus musculus]
Length = 1134
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 116/188 (61%), Gaps = 6/188 (3%)
Query: 367 LNEIIKPG--AESYRKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDK 424
LNE + P A + K + + + R+ K E KPGAES+RK R +T MDK
Sbjct: 623 LNEQLLPKHCATTISKAKNKKSMKQRQAPRKGEP----ERDKPGAESHRKNRSLVTNMDK 678
Query: 425 LHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPS 484
LH+ LTEL A+N+ + V++ T P EYL HLE+R +RA+V + +N T EI +PS
Sbjct: 679 LHLNLTELALAMNHVHSFSVFEHTIFPSEYLSSHLEARLNRAIVTLAGYNATTQEILRPS 738
Query: 485 ELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLL 544
ELLA V+AY++ +Q++ ++ D +R+ NALLQQTQ +DS GE+TV LY WY E LL
Sbjct: 739 ELLAGVKAYISFIQSLAQFLGADASRIVRNALLQQTQPLDSSGEQTVTTLYTNWYLESLL 798
Query: 545 RRVSETQV 552
R+ S +
Sbjct: 799 RQASSGAI 806
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 79/106 (74%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D+KSKP FL +KS+ESC+K I K
Sbjct: 1 MSLTSAYQLKLAEKLTILNDRGQGVLIRMYNIKKTCSDSKSKPPFLLEKSMESCLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 106
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Query: 112 KVLRVLVGGTSGLKI---VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLL 166
+ L+ V + +K+ V E+A AAG+ C +DPAL A+A+ K D E+E+ +ACLL
Sbjct: 941 ECLKEFVTPDTDIKVTLSVFELACAAGVSCDIDPALVAAIANLKADNSSPEEEYKVACLL 1000
Query: 167 MVFVAVCIPKLARNEACFYLASLEGHSNNIHCMARNKI 204
++F+AV +P LA + + F+ +G++NNIHC+ + I
Sbjct: 1001 LIFLAVSLPLLATDPSSFFSIEKDGYNNNIHCLTKAII 1038
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + +N AHEM+H SD +F RLGQM+++Y+ P+K
Sbjct: 129 RSYLDLIVTYTSVILLLSRIEDRRILIGMYNCAHEMLHGHSDPSFARLGQMVLEYDHPLK 188
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 189 KLTEEFGPH 197
>gi|157824172|ref|NP_001101589.1| nck-associated protein 1-like [Rattus norvegicus]
gi|149031869|gb|EDL86781.1| NCK associated protein 1 like (predicted) [Rattus norvegicus]
Length = 1106
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 114/188 (60%), Gaps = 6/188 (3%)
Query: 367 LNEIIKPG--AESYRKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDK 424
LNE + P A + K + + R+ K E KPGAES+RK R +T MDK
Sbjct: 622 LNEQLLPKHCATTISKAKNRKSMKQRQAPRKGEP----ERDKPGAESHRKNRSLVTNMDK 677
Query: 425 LHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPS 484
LH+ LTEL A+N+ + V++ T P EYL HLESR +RA+V + +N T EI +PS
Sbjct: 678 LHLNLTELALAMNHVHSFSVFEHTIFPSEYLSSHLESRLNRAIVSLAGYNATTQEILRPS 737
Query: 485 ELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLL 544
ELLA V+AY + +Q++ ++ D +R+ NALLQQTQ +DS GE+TV LY WY E LL
Sbjct: 738 ELLAGVKAYTSFIQSLAQFLGTDASRIVRNALLQQTQPLDSCGEQTVTTLYTNWYLESLL 797
Query: 545 RRVSETQV 552
R+ S +
Sbjct: 798 RQASSGTI 805
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 75/104 (72%)
Query: 563 VYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSL 622
+ ++ ++ D +R+ NALLQQTQ +DS GE+TV LY WY E LLR+ S+G I S
Sbjct: 750 IQSLAQFLGTDASRIVRNALLQQTQPLDSCGEQTVTTLYTNWYLESLLRQASSGTIVLSP 809
Query: 623 NQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+AF+SL +G F+AEEFSD++E+RALA+++GPYGMK L+E
Sbjct: 810 AMQAFISLPRDGEQNFSAEEFSDISEMRALAEILGPYGMKFLSE 853
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 78/106 (73%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+ESC+K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMESCLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 106
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E+A AAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + F
Sbjct: 931 VFELACAAGVSCDIDPALVAAIANLKADNSSPEEEYKVACLLLIFLAVSLPLLATDPSSF 990
Query: 185 YLASLEGHSNNIHCMAR 201
+ +G++NNIHC+ +
Sbjct: 991 FSIEKDGYNNNIHCLTK 1007
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L L + +N AHEM+H D +FPRLGQM+++Y+ P+K
Sbjct: 129 RSYLDLIVTYTSVILLLSRIEDRRLLIGMYNCAHEMLHGHGDPSFPRLGQMVLEYDHPLK 188
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 189 KLTEEFGPH 197
>gi|148671971|gb|EDL03918.1| NCK associated protein 1 like, isoform CRA_e [Mus musculus]
Length = 1133
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 116/188 (61%), Gaps = 6/188 (3%)
Query: 367 LNEIIKPG--AESYRKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDK 424
LNE + P A + K + + + R+ K E KPGAES+RK R +T MDK
Sbjct: 622 LNEQLLPKHCATTISKAKNKKSMKQRQAPRKGEP----ERDKPGAESHRKNRSLVTNMDK 677
Query: 425 LHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPS 484
LH+ LTEL A+N+ + V++ T P EYL HLE+R +RA+V + +N T EI +PS
Sbjct: 678 LHLNLTELALAMNHVHSFSVFEHTIFPSEYLSSHLEARLNRAIVTLAGYNATTQEILRPS 737
Query: 485 ELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLL 544
ELLA V+AY++ +Q++ ++ D +R+ NALLQQTQ +DS GE+TV LY WY E LL
Sbjct: 738 ELLAGVKAYISFIQSLAQFLGADASRIVRNALLQQTQPLDSSGEQTVTTLYTNWYLESLL 797
Query: 545 RRVSETQV 552
R+ S +
Sbjct: 798 RQASSGAI 805
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 79/106 (74%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D+KSKP FL +KS+ESC+K I K
Sbjct: 1 MSLTSAYQLKLAEKLTILNDRGQGVLIRMYNIKKTCSDSKSKPPFLLEKSMESCLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 106
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 62/95 (65%), Gaps = 5/95 (5%)
Query: 112 KVLRVLVGGTSGLKI---VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLL 166
+ L+ V + +K+ V E+A AAG+ C +DPAL A+A+ K D E+E+ +ACLL
Sbjct: 940 ECLKEFVTPDTDIKVTLSVFELACAAGVSCDIDPALVAAIANLKADNSSPEEEYKVACLL 999
Query: 167 MVFVAVCIPKLARNEACFYLASLEGHSNNIHCMAR 201
++F+AV +P LA + + F+ +G++NNIHC+ +
Sbjct: 1000 LIFLAVSLPLLATDPSSFFSIEKDGYNNNIHCLTK 1034
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + +N AHEM+H SD +F RLGQM+++Y+ P+K
Sbjct: 129 RSYLDLIVTYTSVILLLSRIEDRRILIGMYNCAHEMLHGHSDPSFARLGQMVLEYDHPLK 188
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 189 KLTEEFGPH 197
>gi|167555246|ref|NP_001107884.1| nck-associated protein 1-like [Danio rerio]
gi|161611449|gb|AAI55666.1| Zgc:172352 protein [Danio rerio]
Length = 1123
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 147/296 (49%), Gaps = 68/296 (22%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPGAES RK R +T +DK+H LTELC + + CT+ V P E+L LE R ++
Sbjct: 654 KPGAESLRKDRAFVTNLDKMHQTLTELCSSFSICTDFSVCRHVIVPAEFLLTQLEIRLNK 713
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
V M +N T EI++PS+L + ++AY++ + T+ +Y++ID++R+ + LLQQTQ +DS
Sbjct: 714 VFVQMAGYNQSTHEISRPSDLASGMQAYVSAIHTLSSYINIDVSRLVKSVLLQQTQPLDS 773
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQ 585
+G +T+ LY WY E LLR+ S + VH T+ F N Q
Sbjct: 774 YGAQTITTLYTNWYLEGLLRQASSALI-----------------VHCPTTQCFIN---QN 813
Query: 586 TQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSD 645
T+ N++ F +AEE+SD
Sbjct: 814 TE-----------------------------------NEQNF-----------HAEEYSD 827
Query: 646 VNELRALADLIGPYGMKLLNE-LSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVP 700
+ LR+LA+LIGPYGMK L+E L + E+ SD N L QM +YE P
Sbjct: 828 IGGLRSLAELIGPYGMKFLSENLMWHIISQVGELKKLVSD-NMDVLVQMRANYEDP 882
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 67/97 (69%), Gaps = 4/97 (4%)
Query: 252 KLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS 311
KLAEKL I+ DRG G+L RI +IKK D K +PS+ +DKS+ES IK I +KFPNID +
Sbjct: 6 KLAEKLLILRDRGQGVLVRINHIKKVFSDPKRRPSYFTDKSMESAIKYINRKFPNIDFRG 65
Query: 312 ----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
+S I + ++ +++ L YY +F+D++ F+D VY
Sbjct: 66 GSQQLSSIQKQKTAVLECLHSYYESFIDVMEFRDHVY 102
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 73/137 (53%), Gaps = 24/137 (17%)
Query: 69 FRSITQSYYRSA---HALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSGLK 125
FRS+ Q H L+ I C F C EI+ ++V +G
Sbjct: 911 FRSMVQEALEEIMDRHCPFLMKPIRCLKDFVC-----PEID-------IKVTLG------ 952
Query: 126 IVNEMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEAC 183
V EMASAAGL C +DPAL +ALA+ +TD E+E+ ++CLL+V++AV +P L +
Sbjct: 953 -VYEMASAAGLPCEIDPALVSALANMQTDNPSMEEEYKISCLLLVYIAVSLPSLCLDPNS 1011
Query: 184 FYLASLEGHSNNIHCMA 200
FY GH NNIHC+A
Sbjct: 1012 FYSREHGGHQNNIHCLA 1028
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N+A+E+ + SD ++PRLGQM ++YE P KKLSEEF PH
Sbjct: 154 YNSAYELSNGNSDPSYPRLGQMFLEYEHPWKKLSEEFGPH 193
>gi|417408694|gb|JAA50887.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 212
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 111/164 (67%), Gaps = 13/164 (7%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF GVF Q +TIGVDF +KT+EI +R+KLQIW
Sbjct: 13 EHYDFLFKLVLVGDASVGKTCVVQRFKTGVFSERQSSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDI+ + +F + W+ ++ +YA ++++L+G
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSSIVQLLIGNK 132
Query: 122 SGLKIVNEMASAAG--------LLCTVDPALATALASDKTDLDE 157
S L + E+ A +LC ++ + A D ++++E
Sbjct: 133 SDLGALREVPLAEAQSLAEHYDILCAIETS-----AKDSSNVEE 171
>gi|340714578|ref|XP_003395804.1| PREDICTED: ras-related protein Rab-43-like [Bombus terrestris]
gi|350411163|ref|XP_003489259.1| PREDICTED: ras-related protein Rab-43-like [Bombus impatiens]
Length = 219
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 108/159 (67%), Gaps = 4/159 (2%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK+VL+G+ G GKTC+V+RF G F G TIGVDF +KTV I+++++KLQIW
Sbjct: 15 ENFDYLFKIVLIGDCGTGKTCVVQRFRSGTFIERHGNTIGVDFSMKTVLIDDKKVKLQIW 74
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ +I+VYDI+ + TF L W+ E+ Y S VL +LVG
Sbjct: 75 DTAGQERFRTITQSYYRSANGVIVVYDITKRSTFLSLQHWVEEVRRYTSSHVLLILVGNK 134
Query: 122 SGLKIVNEMASA-AGLLCTVDPALATAL---ASDKTDLD 156
L+ + E+ A LC P + + A + T++D
Sbjct: 135 CDLESLREVEKGEAEALCQYLPEVLQVVETSAKENTNID 173
>gi|189054203|dbj|BAG36723.1| unnamed protein product [Homo sapiens]
Length = 613
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 111/174 (63%), Gaps = 9/174 (5%)
Query: 379 RKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINY 438
+KTR++ Q + + +++ KPGAES+RK R +T MDKLH+ LTEL +N+
Sbjct: 128 KKTRKQRQTPRKGEPERD---------KPGAESHRKNRSIVTNMDKLHLNLTELALTMNH 178
Query: 439 CTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQ 498
+ V++ T P EYL HLE+R +RA+V + +N T EI +PSELLA V+AY+ +Q
Sbjct: 179 VYSFSVFEHTIFPSEYLSSHLEARLNRAIVWLAGYNATTQEIVRPSELLAGVKAYIGFIQ 238
Query: 499 TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 239 SLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTI 292
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 75/104 (72%)
Query: 563 VYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSL 622
+ ++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S+G I S
Sbjct: 237 IQSLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTIILSP 296
Query: 623 NQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+AFVSL EG F+AEEFSD++E+RALA+L+GPYGMK L+E
Sbjct: 297 AMQAFVSLPREGEQNFSAEEFSDISEMRALAELLGPYGMKFLSE 340
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + FY
Sbjct: 447 ELASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSLPLLATDPSSFYS 506
Query: 187 ASLEGHSNNIHCMARNKI 204
+G++NNIHC+ + I
Sbjct: 507 IEKDGYNNNIHCLTKAII 524
>gi|77980866|gb|AAH01604.3| NCKAP1L protein [Homo sapiens]
Length = 865
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 111/174 (63%), Gaps = 9/174 (5%)
Query: 379 RKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINY 438
+KTR++ Q + + +++ KPGAES+RK R +T MDKLH+ LTEL +N+
Sbjct: 380 KKTRKQRQTPRKGEPERD---------KPGAESHRKNRSIVTNMDKLHLNLTELALTMNH 430
Query: 439 CTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQ 498
+ V++ T P EYL HLE+R +RA+V + +N T EI +PSELLA V+AY+ +Q
Sbjct: 431 VYSFSVFEHTIFPSEYLSSHLEARLNRAIVWLAGYNATTQEIVRPSELLAGVKAYIGFIQ 490
Query: 499 TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 491 SLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTI 544
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 75/104 (72%)
Query: 563 VYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSL 622
+ ++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S+G I S
Sbjct: 489 IQSLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTIILSP 548
Query: 623 NQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+AFVSL EG F+AEEFSD++E+RALA+L+GPYGMK L+E
Sbjct: 549 AMQAFVSLPREGEQNFSAEEFSDISEMRALAELLGPYGMKFLSE 592
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + FY
Sbjct: 699 ELASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSLPLLATDPSSFYS 758
Query: 187 ASLEGHSNNIHCMARNKI 204
+G++NNIHC+ + I
Sbjct: 759 IEKDGYNNNIHCLTKAII 776
>gi|444317447|ref|XP_004179380.1| hypothetical protein TBLA_0C00450 [Tetrapisispora blattae CBS 6284]
gi|387512421|emb|CCH59861.1| hypothetical protein TBLA_0C00450 [Tetrapisispora blattae CBS 6284]
Length = 210
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 96/123 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+GN+GVGK+CL+ RF+ + +TIGVDF IKT+EI+ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYSNDYISTIGVDFKIKTIEIDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR +H +I+VYD++ Q +F+ + WL+EI+ YA+ VL++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQDSFNSVKMWLQEIDRYATSSVLKLLVGNKS 123
Query: 123 GLK 125
LK
Sbjct: 124 DLK 126
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 193 SNNIHCMARNKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELME 251
S+ + + NK D +D+ I +V ++FA+ ++M +LETSA S NVE+ F+ +A ++ E
Sbjct: 112 SSVLKLLVGNKSDLKDKRIVEYDVAKEFAETNNMPFLETSALDSTNVEEAFLTMAKQIKE 171
Query: 252 KLAEK 256
L+++
Sbjct: 172 SLSQQ 176
>gi|73996111|ref|XP_543618.2| PREDICTED: NCK-associated protein 1-like isoform 1 [Canis lupus
familiaris]
Length = 1133
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 102/147 (69%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPGAES+RK R +T MDKLH+ LTEL +N+ + V++ T P EYL HLE+R +R
Sbjct: 659 KPGAESHRKNRSIVTNMDKLHLHLTELALTMNHVHSFSVFEHTIFPSEYLSSHLEARLNR 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
A+V + +N T EIA+PSELLA V+AY++ +Q++ +V D++RV NALLQQTQ +DS
Sbjct: 719 AIVWLAGYNAATQEIARPSELLAGVKAYISFIQSLAQFVGADVSRVIRNALLQQTQPLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
GE+T+ LY WY E LLR+ S +
Sbjct: 779 CGEQTITTLYTNWYLEGLLRQASSGTI 805
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 76/104 (73%)
Query: 563 VYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSL 622
+ ++ +V D++RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S+G I +
Sbjct: 750 IQSLAQFVGADVSRVIRNALLQQTQPLDSCGEQTITTLYTNWYLEGLLRQASSGTITLAP 809
Query: 623 NQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+AFVSL EG F+AEEFSDV+E+RALA+L+GPYGMK L+E
Sbjct: 810 AMQAFVSLPREGEQNFSAEEFSDVSEMRALAELLGPYGMKFLSE 853
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+ES +K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMESSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 106
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Query: 112 KVLRVLVGGTSGLKI---VNEMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLL 166
+ L+ V + +K+ + E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL
Sbjct: 940 ECLKEFVTADTDIKVTLSIFELASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLL 999
Query: 167 MVFVAVCIPKLARNEACFYLASLEGHSNNIHCMARNKI 204
+VF+A +P LA + A F+ +G++NNIHC+ + I
Sbjct: 1000 LVFLAASLPLLATDPASFFSIEKDGYNNNIHCLTKAII 1037
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 33/40 (82%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM+H SD +F RLGQM+++Y+ P+KKL+EEF PH
Sbjct: 158 YNCAHEMLHGHSDPSFARLGQMVLEYDHPLKKLTEEFGPH 197
>gi|54261537|gb|AAH84547.1| NCKAP1L protein, partial [Homo sapiens]
Length = 712
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 111/174 (63%), Gaps = 9/174 (5%)
Query: 379 RKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINY 438
+KTR++ Q + + +++ KPGAES+RK R +T MDKLH+ LTEL +N+
Sbjct: 227 KKTRKQRQTPRKGEPERD---------KPGAESHRKNRSIVTNMDKLHLNLTELALTMNH 277
Query: 439 CTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQ 498
+ V++ T P EYL HLE+R +RA+V + +N T EI +PSELLA V+AY+ +Q
Sbjct: 278 VYSFSVFEHTIFPSEYLSSHLEARLNRAIVWLAGYNATTQEIVRPSELLAGVKAYIGFIQ 337
Query: 499 TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 338 SLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTI 391
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 75/104 (72%)
Query: 563 VYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSL 622
+ ++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S+G I S
Sbjct: 336 IQSLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTIILSP 395
Query: 623 NQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+AFVSL EG F+AEEFSD++E+RALA+L+GPYGMK L+E
Sbjct: 396 AMQAFVSLPREGEQNFSAEEFSDISEMRALAELLGPYGMKFLSE 439
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + FY
Sbjct: 546 ELASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSLPLLATDPSSFYS 605
Query: 187 ASLEGHSNNIHCMARNKI 204
+G++NNIHC+ + I
Sbjct: 606 IEKDGYNNNIHCLTKAII 623
>gi|40787656|gb|AAH64997.1| NCKAP1L protein, partial [Homo sapiens]
Length = 837
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 111/174 (63%), Gaps = 9/174 (5%)
Query: 379 RKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINY 438
+KTR++ Q + + +++ KPGAES+RK R +T MDKLH+ LTEL +N+
Sbjct: 352 KKTRKQRQTPRKGEPERD---------KPGAESHRKNRSIVTNMDKLHLNLTELALTMNH 402
Query: 439 CTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQ 498
+ V++ T P EYL HLE+R +RA+V + +N T EI +PSELLA V+AY+ +Q
Sbjct: 403 VYSFSVFEHTIFPSEYLSSHLEARLNRAIVWLAGYNATTQEIVRPSELLAGVKAYIGFIQ 462
Query: 499 TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 463 SLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTI 516
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 75/104 (72%)
Query: 563 VYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSL 622
+ ++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S+G I S
Sbjct: 461 IQSLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTIILSP 520
Query: 623 NQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+AFVSL EG F+AEEFSD++E+RALA+L+GPYGMK L+E
Sbjct: 521 AMQAFVSLPREGEQNFSAEEFSDISEMRALAELLGPYGMKFLSE 564
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + FY
Sbjct: 671 ELASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSLPLLATDPSSFYS 730
Query: 187 ASLEGHSNNIHCMARNKI 204
+G++NNIHC+ + I
Sbjct: 731 IEKDGYNNNIHCLTKAII 748
>gi|344266927|ref|XP_003405530.1| PREDICTED: nck-associated protein 1 [Loxodonta africana]
Length = 1134
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 112/174 (64%), Gaps = 9/174 (5%)
Query: 379 RKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINY 438
+KT ++ QI + + +++ KPGAES+RK R +TTMDKLH+ LTEL +N+
Sbjct: 642 KKTMKQRQIPRKGEPERD---------KPGAESHRKNRSIVTTMDKLHLTLTELALTMNH 692
Query: 439 CTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQ 498
+ V++ T P EYL HLE+R +RA+V + +N T EI +PSELLA V+AY+ +Q
Sbjct: 693 VHSFSVFEHTIFPSEYLSSHLEARLNRAIVWLAGYNAPTQEIVRPSELLAGVKAYIGFIQ 752
Query: 499 TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
++ ++ D +R+ +ALLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 753 SLAQFLGADASRIIRSALLQQTQPLDSSGEQTITTLYTNWYLESLLRQASSGAI 806
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 75/104 (72%)
Query: 563 VYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSL 622
+ ++ ++ D +R+ +ALLQQTQ +DS GE+T+ LY WY E LLR+ S+G I +
Sbjct: 751 IQSLAQFLGADASRIIRSALLQQTQPLDSSGEQTITTLYTNWYLESLLRQASSGAIILAP 810
Query: 623 NQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+AF++L EG F+AEEFSD++E+RALA+L+GPYGMK L+E
Sbjct: 811 AMQAFINLPREGEQNFSAEEFSDISEMRALAELLGPYGMKFLSE 854
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 76/106 (71%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+ES +K I K
Sbjct: 1 MSLTPAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLVEKSMESSLKYINK 60
Query: 303 KFPNIDIKSVSG----ISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQHLGLVHREKTEIIRFLTNYYQSFVDVMEFRDHVY 106
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 56/80 (70%), Gaps = 2/80 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACF 184
V E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + F
Sbjct: 959 VFELASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLLLIFIAVSLPLLATDPSSF 1018
Query: 185 YLASLEGHSNNIHCMARNKI 204
Y +G++NNIHC+ + I
Sbjct: 1019 YNIEKDGYNNNIHCLTKAII 1038
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + +N AHEMVH SD +F RLGQM+++Y+ P+K
Sbjct: 129 RSYLDLIVTYTSVILLLSRIEDRRILIGLYNCAHEMVHGHSDASFARLGQMVLEYDHPLK 188
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 189 KLTEEFTPH 197
>gi|297692083|ref|XP_002823395.1| PREDICTED: NCK-associated protein 1-like isoform 1 [Pongo abelii]
Length = 1130
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 111/174 (63%), Gaps = 9/174 (5%)
Query: 379 RKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINY 438
+KTR++ Q + + +++ KPGAES+RK R +T MDKLH+ LTEL +N+
Sbjct: 642 KKTRKQRQTPRKGEPERD---------KPGAESHRKNRSIVTNMDKLHLNLTELALTMNH 692
Query: 439 CTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQ 498
+ V++ T P EYL HLE+R +RA+V + +N T EI +PSELLA V+AY+ +Q
Sbjct: 693 VYSFSVFEHTIFPSEYLSSHLEARLNRAIVWLAGYNATTQEIVRPSELLAGVKAYIGFIQ 752
Query: 499 TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 753 SLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTI 806
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 75/104 (72%)
Query: 563 VYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSL 622
+ ++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S+G I S
Sbjct: 751 IQSLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTIVLSP 810
Query: 623 NQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+AF+SL EG F+AEEFSD++E+RALA+L+GPYGMK L+E
Sbjct: 811 AMQAFISLPREGEQNFSAEEFSDISEMRALAELLGPYGMKFLSE 854
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 76/106 (71%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+E +K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMEPSVKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 106
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + FY
Sbjct: 961 ELASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSLPLLATDPSSFYS 1020
Query: 187 ASLEGHSNNIHCMARNKI 204
+G++NNIHC+ + I
Sbjct: 1021 IEKDGYNNNIHCLTKAII 1038
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + +N AHEM+H D +F RLGQM+++Y+ P+K
Sbjct: 129 RSYLDLIVTYTSVILLLSRIEDRRILIGMYNCAHEMLHGHGDPSFARLGQMVLEYDHPLK 188
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 189 KLTEEFGPH 197
>gi|193713749|ref|XP_001945092.1| PREDICTED: ras-related protein Rab-43-like isoform 1 [Acyrthosiphon
pisum]
gi|328718639|ref|XP_003246535.1| PREDICTED: ras-related protein Rab-43-like isoform 2 [Acyrthosiphon
pisum]
Length = 235
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 104/150 (69%), Gaps = 1/150 (0%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ FLFK+VL+G+ G GKTC+V+RF G + QG TIGVDF +KT++I+ +++KLQIW
Sbjct: 32 DNFDFLFKIVLIGDCGTGKTCVVQRFKSGTYAENQGNTIGVDFSMKTIKIDGKKVKLQIW 91
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAG ERFR+ITQSYYRSA+ ++LVYDI+ + TF L W+ E+ Y S VL VL+G
Sbjct: 92 DTAGHERFRTITQSYYRSANGVLLVYDITKRATFLNLQRWVEEVRRYTSSNVLLVLIGNK 151
Query: 122 SGLKIVNEMA-SAAGLLCTVDPALATALAS 150
L+ ++ S A +C P L + L +
Sbjct: 152 CDLEENRQVELSEADAMCEYFPELLSVLET 181
>gi|194212088|ref|XP_001504626.2| PREDICTED: NCK-associated protein 1-like [Equus caballus]
Length = 1136
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 108/161 (67%)
Query: 392 KKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAP 451
K+ + +K E KPGAES+RK R +T MDKLH+ LTEL +N+ + V++ T P
Sbjct: 646 KQRQTPRKGEPERDKPGAESHRKNRSIVTNMDKLHLNLTELALTMNHVHSFSVFEHTIFP 705
Query: 452 REYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRV 511
EYL HLE+R +RA+V + +N T EIA+PSELLA V+AY++ +Q++ ++ D++RV
Sbjct: 706 SEYLSSHLEARLNRAIVWLAGYNATTQEIARPSELLAGVKAYISFIQSLAQFLGADVSRV 765
Query: 512 FNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
NALLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 766 IRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTI 806
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 109/180 (60%), Gaps = 7/180 (3%)
Query: 491 RAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV--AALYIQWYSEVL--LRR 546
+ ++N+ + H+ VF + + ++ + SH E + A +++ Y+ + R
Sbjct: 678 KLHLNLTELALTMNHVHSFSVFEHTIFP-SEYLSSHLEARLNRAIVWLAGYNATTQEIAR 736
Query: 547 VSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYS 606
SE ++F++ ++ ++ D++RV NALLQQTQ +DS GE+T+ LY WY
Sbjct: 737 PSELLAGVKAYISFIQ--SLAQFLGADVSRVIRNALLQQTQPLDSCGEQTITTLYTNWYL 794
Query: 607 EVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
E LLR+ S+G I S +AFVSL EG F+AEEFSDV+E+RALA+L+GPYGMK L+E
Sbjct: 795 ESLLRQASSGTIILSPAMQAFVSLPREGEQNFSAEEFSDVSEMRALAELLGPYGMKFLSE 854
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+ES +K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMESSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 106
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + +N AHEM+H SD +F RLGQM+++Y+ P+K
Sbjct: 129 RSYLDLIVTYTSVILLLSRIEDRRILIGMYNCAHEMLHGHSDPSFARLGQMVLEYDHPLK 188
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 189 KLTEEFGPH 197
>gi|119617192|gb|EAW96786.1| NCK-associated protein 1-like, isoform CRA_a [Homo sapiens]
Length = 1136
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 111/174 (63%), Gaps = 9/174 (5%)
Query: 379 RKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINY 438
+KTR++ Q + + +++ KPGAES+RK R +T MDKLH+ LTEL +N+
Sbjct: 651 KKTRKQRQTPRKGEPERD---------KPGAESHRKNRSIVTNMDKLHLNLTELALTMNH 701
Query: 439 CTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQ 498
+ V++ T P EYL HLE+R +RA+V + +N T EI +PSELLA V+AY+ +Q
Sbjct: 702 VYSFSVFEHTIFPSEYLSSHLEARLNRAIVWLAGYNATTQEIVRPSELLAGVKAYIGFIQ 761
Query: 499 TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 762 SLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTI 815
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 108/183 (59%), Gaps = 13/183 (7%)
Query: 491 RAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV--AALYIQWYSEVLLRRVS 548
+ ++N+ + H+ VF + + ++ + SH E + A +++ Y+ +
Sbjct: 687 KLHLNLTELALTMNHVYSFSVFEHTIFP-SEYLSSHLEARLNRAIVWLAGYNAT-----T 740
Query: 549 ETQVKSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQ 603
+ V+ LL ++ Y ++ ++ D +RV NALLQQTQ +DS GE+T+ LY
Sbjct: 741 QEIVRPSELLAGVKAYIGFIQSLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTN 800
Query: 604 WYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKL 663
WY E LLR+ S+G I S +AFVSL EG F+AEEFSD++E+RALA+L+GPYGMK
Sbjct: 801 WYLESLLRQASSGTIILSPAMQAFVSLPREGEQNFSAEEFSDISEMRALAELLGPYGMKF 860
Query: 664 LNE 666
L+E
Sbjct: 861 LSE 863
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 76/106 (71%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+E +K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMEPSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 106
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + FY
Sbjct: 970 ELASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSLPLLATDPSSFYS 1029
Query: 187 ASLEGHSNNIHCMARNKI 204
+G++NNIHC+ + I
Sbjct: 1030 IEKDGYNNNIHCLTKAII 1047
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + +N AHEM+H D +F RLGQM+++Y+ P+K
Sbjct: 129 RSYLDLIVTYTSVILLLSRIEDRRILIGMYNCAHEMLHGHGDPSFARLGQMVLEYDHPLK 188
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 189 KLTEEFGPH 197
>gi|397472136|ref|XP_003807612.1| PREDICTED: nck-associated protein 1-like isoform 1 [Pan paniscus]
Length = 1127
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 111/174 (63%), Gaps = 9/174 (5%)
Query: 379 RKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINY 438
+KTR++ Q + + +++ KPGAES+RK R +T MDKLH+ LTEL +N+
Sbjct: 642 KKTRKQRQTPRKGEPERD---------KPGAESHRKNRSIVTNMDKLHLNLTELALTMNH 692
Query: 439 CTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQ 498
+ V++ T P EYL HLE+R +RA+V + +N T EI +PSELLA V+AY+ +Q
Sbjct: 693 VYSFSVFEHTIFPSEYLSSHLEARLNRAIVWLAGYNATTQEIVRPSELLAGVKAYIGFIQ 752
Query: 499 TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 753 SLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTI 806
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 75/104 (72%)
Query: 563 VYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSL 622
+ ++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S+G I S
Sbjct: 751 IQSLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTIILSP 810
Query: 623 NQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+AFVSL EG F+AEEFSD++E+RALA+L+GPYGMK L+E
Sbjct: 811 AMQAFVSLPREGEQNFSAEEFSDISEMRALAELLGPYGMKFLSE 854
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 76/106 (71%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+E +K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMEPSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 106
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + FY
Sbjct: 961 ELASAAGVACDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSLPLLATDPSSFYS 1020
Query: 187 ASLEGHSNNIHCMARNKI 204
+G++NNIHC+ + I
Sbjct: 1021 IEKDGYNNNIHCLTKAII 1038
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + +N AHEM+H D +F RLGQM+++Y+ P+K
Sbjct: 129 RSYLDLIVTYTSVILLLSRIEDRRILIGMYNCAHEMLHGHGDPSFARLGQMVLEYDHPLK 188
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 189 KLTEEFGPH 197
>gi|297692085|ref|XP_002823396.1| PREDICTED: NCK-associated protein 1-like isoform 2 [Pongo abelii]
Length = 1080
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 111/174 (63%), Gaps = 9/174 (5%)
Query: 379 RKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINY 438
+KTR++ Q + + +++ KPGAES+RK R +T MDKLH+ LTEL +N+
Sbjct: 592 KKTRKQRQTPRKGEPERD---------KPGAESHRKNRSIVTNMDKLHLNLTELALTMNH 642
Query: 439 CTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQ 498
+ V++ T P EYL HLE+R +RA+V + +N T EI +PSELLA V+AY+ +Q
Sbjct: 643 VYSFSVFEHTIFPSEYLSSHLEARLNRAIVWLAGYNATTQEIVRPSELLAGVKAYIGFIQ 702
Query: 499 TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 703 SLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTI 756
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 75/104 (72%)
Query: 563 VYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSL 622
+ ++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S+G I S
Sbjct: 701 IQSLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTIVLSP 760
Query: 623 NQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+AF+SL EG F+AEEFSD++E+RALA+L+GPYGMK L+E
Sbjct: 761 AMQAFISLPREGEQNFSAEEFSDISEMRALAELLGPYGMKFLSE 804
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + FY
Sbjct: 911 ELASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSLPLLATDPSSFYS 970
Query: 187 ASLEGHSNNIHCMARNKI 204
+G++NNIHC+ + I
Sbjct: 971 IEKDGYNNNIHCLTKAII 988
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + +N AHEM+H D +F RLGQM+++Y+ P+K
Sbjct: 79 RSYLDLIVTYTSVILLLSRIEDRRILIGMYNCAHEMLHGHGDPSFARLGQMVLEYDHPLK 138
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 139 KLTEEFGPH 147
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Query: 293 LESCIKQIVKKFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
+E +K I KKFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 1 MEPSVKYINKKFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 56
>gi|34485727|ref|NP_005328.2| nck-associated protein 1-like isoform 1 [Homo sapiens]
gi|218512111|sp|P55160.3|NCKPL_HUMAN RecName: Full=Nck-associated protein 1-like; AltName:
Full=Hematopoietic protein 1; AltName:
Full=Membrane-associated protein HEM-1
gi|62739873|gb|AAH93771.1| NCK-associated protein 1-like [Homo sapiens]
gi|64653496|gb|AAH93769.1| NCK-associated protein 1-like [Homo sapiens]
gi|119617193|gb|EAW96787.1| NCK-associated protein 1-like, isoform CRA_b [Homo sapiens]
Length = 1127
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 111/174 (63%), Gaps = 9/174 (5%)
Query: 379 RKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINY 438
+KTR++ Q + + +++ KPGAES+RK R +T MDKLH+ LTEL +N+
Sbjct: 642 KKTRKQRQTPRKGEPERD---------KPGAESHRKNRSIVTNMDKLHLNLTELALTMNH 692
Query: 439 CTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQ 498
+ V++ T P EYL HLE+R +RA+V + +N T EI +PSELLA V+AY+ +Q
Sbjct: 693 VYSFSVFEHTIFPSEYLSSHLEARLNRAIVWLAGYNATTQEIVRPSELLAGVKAYIGFIQ 752
Query: 499 TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 753 SLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTI 806
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 75/104 (72%)
Query: 563 VYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSL 622
+ ++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S+G I S
Sbjct: 751 IQSLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTIILSP 810
Query: 623 NQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+AFVSL EG F+AEEFSD++E+RALA+L+GPYGMK L+E
Sbjct: 811 AMQAFVSLPREGEQNFSAEEFSDISEMRALAELLGPYGMKFLSE 854
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 76/106 (71%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+E +K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMEPSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 106
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + FY
Sbjct: 961 ELASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSLPLLATDPSSFYS 1020
Query: 187 ASLEGHSNNIHCMARNKI 204
+G++NNIHC+ + I
Sbjct: 1021 IEKDGYNNNIHCLTKAII 1038
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + +N AHEM+H D +F RLGQM+++Y+ P+K
Sbjct: 129 RSYLDLIVTYTSVILLLSRIEDRRILIGMYNCAHEMLHGHGDPSFARLGQMVLEYDHPLK 188
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 189 KLTEEFGPH 197
>gi|332839147|ref|XP_509114.3| PREDICTED: NCK-associated protein 1-like isoform 2 [Pan
troglodytes]
Length = 1090
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 111/174 (63%), Gaps = 9/174 (5%)
Query: 379 RKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINY 438
+KTR++ Q + + +++ KPGAES+RK R +T MDKLH+ LTEL +N+
Sbjct: 605 KKTRKQRQTPRKGEPERD---------KPGAESHRKNRSIVTNMDKLHLNLTELALTMNH 655
Query: 439 CTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQ 498
+ V++ T P EYL HLE+R +RA+V + +N T EI +PSELLA V+AY+ +Q
Sbjct: 656 VYSFSVFEHTIFPSEYLSSHLEARLNRAIVWLAGYNATTQEIVRPSELLAGVKAYIGFIQ 715
Query: 499 TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 716 SLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTI 769
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 75/104 (72%)
Query: 563 VYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSL 622
+ ++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S+G I S
Sbjct: 714 IQSLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTIILSP 773
Query: 623 NQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+AFVSL EG F+AEEFSD++E+RALA+L+GPYGMK L+E
Sbjct: 774 AMQAFVSLPREGEQNFSAEEFSDISEMRALAELLGPYGMKFLSE 817
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + FY
Sbjct: 924 ELASAAGVACDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSLPLLATDPSSFYS 983
Query: 187 ASLEGHSNNIHCMARNKI 204
+G++NNIHC+ + I
Sbjct: 984 IEKDGYNNNIHCLTKAII 1001
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + +N AHEM+H D +F RLGQM+++Y+ P+K
Sbjct: 92 RSYLDLIVTYTSVILLLSRIEDRRILIGMYNCAHEMLHGHGDPSFARLGQMVLEYDHPLK 151
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 152 KLTEEFGPH 160
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 33/102 (32%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKK-------------------------- 34
Query: 303 KFPNIDIKSVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
+ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 35 -------QHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 69
>gi|397472138|ref|XP_003807613.1| PREDICTED: nck-associated protein 1-like isoform 2 [Pan paniscus]
Length = 1077
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 111/174 (63%), Gaps = 9/174 (5%)
Query: 379 RKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINY 438
+KTR++ Q + + +++ KPGAES+RK R +T MDKLH+ LTEL +N+
Sbjct: 592 KKTRKQRQTPRKGEPERD---------KPGAESHRKNRSIVTNMDKLHLNLTELALTMNH 642
Query: 439 CTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQ 498
+ V++ T P EYL HLE+R +RA+V + +N T EI +PSELLA V+AY+ +Q
Sbjct: 643 VYSFSVFEHTIFPSEYLSSHLEARLNRAIVWLAGYNATTQEIVRPSELLAGVKAYIGFIQ 702
Query: 499 TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 703 SLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTI 756
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 75/104 (72%)
Query: 563 VYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSL 622
+ ++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S+G I S
Sbjct: 701 IQSLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTIILSP 760
Query: 623 NQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+AFVSL EG F+AEEFSD++E+RALA+L+GPYGMK L+E
Sbjct: 761 AMQAFVSLPREGEQNFSAEEFSDISEMRALAELLGPYGMKFLSE 804
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + FY
Sbjct: 911 ELASAAGVACDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSLPLLATDPSSFYS 970
Query: 187 ASLEGHSNNIHCMARNKI 204
+G++NNIHC+ + I
Sbjct: 971 IEKDGYNNNIHCLTKAII 988
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + +N AHEM+H D +F RLGQM+++Y+ P+K
Sbjct: 79 RSYLDLIVTYTSVILLLSRIEDRRILIGMYNCAHEMLHGHGDPSFARLGQMVLEYDHPLK 138
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 139 KLTEEFGPH 147
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Query: 293 LESCIKQIVKKFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
+E +K I KKFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 1 MEPSLKYINKKFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 56
>gi|296923771|ref|NP_001171905.1| nck-associated protein 1-like isoform 2 [Homo sapiens]
gi|194374665|dbj|BAG62447.1| unnamed protein product [Homo sapiens]
Length = 1077
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 111/174 (63%), Gaps = 9/174 (5%)
Query: 379 RKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINY 438
+KTR++ Q + + +++ KPGAES+RK R +T MDKLH+ LTEL +N+
Sbjct: 592 KKTRKQRQTPRKGEPERD---------KPGAESHRKNRSIVTNMDKLHLNLTELALTMNH 642
Query: 439 CTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQ 498
+ V++ T P EYL HLE+R +RA+V + +N T EI +PSELLA V+AY+ +Q
Sbjct: 643 VYSFSVFEHTIFPSEYLSSHLEARLNRAIVWLAGYNATTQEIVRPSELLAGVKAYIGFIQ 702
Query: 499 TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 703 SLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTI 756
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 75/104 (72%)
Query: 563 VYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSL 622
+ ++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S+G I S
Sbjct: 701 IQSLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTIILSP 760
Query: 623 NQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+AFVSL EG F+AEEFSD++E+RALA+L+GPYGMK L+E
Sbjct: 761 AMQAFVSLPREGEQNFSAEEFSDISEMRALAELLGPYGMKFLSE 804
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + FY
Sbjct: 911 ELASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSLPLLATDPSSFYS 970
Query: 187 ASLEGHSNNIHCMARNKI 204
+G++NNIHC+ + I
Sbjct: 971 IEKDGYNNNIHCLTKAII 988
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + +N AHEM+H D +F RLGQM+++Y+ P+K
Sbjct: 79 RSYLDLIVTYTSVILLLSRIEDRRILIGMYNCAHEMLHGHGDPSFARLGQMVLEYDHPLK 138
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 139 KLTEEFGPH 147
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Query: 293 LESCIKQIVKKFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
+E +K I KKFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 1 MEPSLKYINKKFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 56
>gi|432862576|ref|XP_004069923.1| PREDICTED: ras-related protein Rab-19-like [Oryzias latipes]
Length = 218
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 119/199 (59%), Gaps = 1/199 (0%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ + FLFK++LVG++ VGKTCLV+ F GVF Q TIGVDF ++T++I+ +++K+Q+W
Sbjct: 10 DSFDFLFKIILVGDSDVGKTCLVQSFKSGVFMEKQQNTIGVDFTVQTMDIDGKKVKMQVW 69
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAH ++ YDIS + TF+ + W+RE+++Y + V+ VLVG
Sbjct: 70 DTAGQERFRTITQSYYRSAHGAVVAYDISRRGTFESVPHWIREVQQYGAASVVLVLVGNK 129
Query: 122 SGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNE 181
S L + ++ + AL + + E + +A P +A E
Sbjct: 130 SDLHLQRQVLFEDACTLAEHNGVLAALETSAMEAQNVEAAFVLMARELMARNGPSVA-EE 188
Query: 182 ACFYLASLEGHSNNIHCMA 200
A A L G + +H A
Sbjct: 189 ASQSPAPLRGSTRPLHASA 207
>gi|383854352|ref|XP_003702685.1| PREDICTED: 28S ribosomal protein S5, mitochondrial-like [Megachile
rotundata]
Length = 630
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 108/159 (67%), Gaps = 4/159 (2%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK+VL+G+ G GKTC+V+RF G F G TIGVDF +KTV I++++IKLQIW
Sbjct: 426 ENFDYLFKIVLIGDCGTGKTCVVQRFRSGTFIERHGNTIGVDFSMKTVLIDDKKIKLQIW 485
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ +I+VYDI+ + TF L W+ E+ Y S VL VLVG
Sbjct: 486 DTAGQERFRTITQSYYRSANGVIVVYDITKRSTFLSLQHWVEEVRRYTSSHVLLVLVGNK 545
Query: 122 SGLKIVNEM-ASAAGLLCTVDPALATAL---ASDKTDLD 156
L+ + E+ A LC P + + A + T++D
Sbjct: 546 CDLEDLREVEKEEAEALCQYLPEVLQVVETSAKENTNID 584
>gi|66508944|ref|XP_624576.1| PREDICTED: ras-related protein Rab-43 [Apis mellifera]
Length = 219
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 108/159 (67%), Gaps = 4/159 (2%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK+VL+G+ G GKTC+V+RF G F G TIGVDF +KT+ I+++++KLQIW
Sbjct: 15 ENFDYLFKIVLIGDCGTGKTCVVQRFRSGTFIERHGNTIGVDFSMKTILIDDKKVKLQIW 74
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ +I+VYDI+ + TF L W+ E+ Y S VL +L+G
Sbjct: 75 DTAGQERFRTITQSYYRSANGVIVVYDITKRSTFLSLQHWVEEVRRYTSSHVLLILIGNK 134
Query: 122 SGLKIVNEMASA-AGLLCTVDPALATAL---ASDKTDLD 156
L+ + E+ A LC P + + A + T++D
Sbjct: 135 CDLENLREVEKGEAEALCQYLPEVLQVVETSAKENTNID 173
>gi|148225612|ref|NP_001089457.1| uncharacterized protein LOC734507 [Xenopus laevis]
gi|67678420|gb|AAH97569.1| MGC114765 protein [Xenopus laevis]
Length = 209
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 113/166 (68%), Gaps = 3/166 (1%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAG 65
FLFK++L+G+AGVGKTC+V+RF GVF QG+TIGVDF +KT+EI +R+KLQIWDTAG
Sbjct: 14 FLFKLILIGDAGVGKTCVVQRFRSGVFAERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAG 73
Query: 66 QERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSGLK 125
QERFR+ITQSYYRSA+ I+ YDI+ + +F + W+ ++++YA ++++L+G S L
Sbjct: 74 QERFRTITQSYYRSANGAIIAYDITKRKSFASVPRWIEDVKKYAGSNIVQLLIGNKSDLH 133
Query: 126 IVNE--MASAAGLLCTVD-PALATALASDKTDLDEDEHVLACLLMV 168
E + A L D P A D ++++E +A LM+
Sbjct: 134 ESREVQLREAETLARHFDIPCAIETSAKDSSNVEEAFEKMATELMM 179
>gi|449473409|ref|XP_002186832.2| PREDICTED: uncharacterized protein LOC100219191 [Taeniopygia
guttata]
Length = 423
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 97/129 (75%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E + FLFK+VL+G+A VGKTCLV+RF G F QG+TIGVDF +K++EI +R+KLQIW
Sbjct: 223 ESFDFLFKLVLIGDASVGKTCLVQRFKTGAFSERQGSTIGVDFTMKSLEIQGKRVKLQIW 282
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDIS + +F + W+ ++ +YA ++++L+G
Sbjct: 283 DTAGQERFRTITQSYYRSANGAILAYDISKRGSFLSIPRWIEDVRKYAGSNIVQLLIGNK 342
Query: 122 SGLKIVNEM 130
S L + E+
Sbjct: 343 SDLSDLREV 351
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 193 SNNIHCMARNKIDRED-REIPTEVGEDFAKRHD--MYYLETSAKASDNVEKLFMQIAAEL 249
SN + + NK D D RE+ E + A+ +D + +ETSAK S NVE+ F+++A EL
Sbjct: 332 SNIVQLLIGNKSDLSDLREVQLEEAQSLAEHYDNIICAIETSAKDSSNVEEAFVKMATEL 391
Query: 250 M 250
M
Sbjct: 392 M 392
>gi|324514540|gb|ADY45900.1| Ras-related protein Rab-43 [Ascaris suum]
Length = 210
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 106/150 (70%), Gaps = 8/150 (5%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ + FLFK+VL+G+ GVGKTC+V+RF G F QG TIGVDF +KT+ I +R+KLQIW
Sbjct: 5 DSFDFLFKIVLIGDMGVGKTCVVQRFKNGTFIERQGTTIGVDFTMKTLVIEGKRVKLQIW 64
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DT GQERFR+ITQSYYRSA+ +IL YD++C+ +F+ L WL ++ ++A+ V +VLV
Sbjct: 65 DTGGQERFRTITQSYYRSANGIILCYDMTCRQSFESLQRWLDDVSKFAAPNVAKVLVATK 124
Query: 122 SGL---KIV-----NEMASAAGLLCTVDPA 143
+ L ++V NE+A + G+ V+ +
Sbjct: 125 ADLESERVVDSEEGNELAHSQGMCFFVETS 154
>gi|354497242|ref|XP_003510730.1| PREDICTED: nck-associated protein 1-like isoform 2 [Cricetulus
griseus]
Length = 1106
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/143 (51%), Positives = 100/143 (69%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPGAES+RK R +T MDKLH+ LTEL A+N+ + V++ T P EYL HLE+R +R
Sbjct: 659 KPGAESHRKNRSIVTNMDKLHLNLTELALAMNHVHSFTVFEHTIFPSEYLSSHLEARLNR 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
A+V + +N T EI +PSELLA V+AY++ +Q++ ++ D +RV NALLQQTQ +DS
Sbjct: 719 AIVTLAGYNATTQEILRPSELLAGVKAYISFIQSLAQFLGADASRVVRNALLQQTQPLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVS 548
GE+TV LY WY E LLR+ S
Sbjct: 779 CGEQTVTTLYTNWYLESLLRQAS 801
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 75/104 (72%)
Query: 563 VYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSL 622
+ ++ ++ D +RV NALLQQTQ +DS GE+TV LY WY E LLR+ S+G I S
Sbjct: 750 IQSLAQFLGADASRVVRNALLQQTQPLDSCGEQTVTTLYTNWYLESLLRQASSGAIVLSP 809
Query: 623 NQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+AF+SL +G F+AEEFSD++E+RALA+++GPYGMK L+E
Sbjct: 810 AMQAFISLPRDGEQNFSAEEFSDISEMRALAEILGPYGMKFLSE 853
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 76/106 (71%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+ES +K I K
Sbjct: 1 MSLTTAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMESSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 106
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + F
Sbjct: 931 VFELASAAGVSCDIDPALVAAIANLKADNSSPEEEYKVACLLLIFLAVSLPLLATDPSSF 990
Query: 185 YLASLEGHSNNIHCMAR 201
Y +G++NNIHC+ +
Sbjct: 991 YSIEKDGYNNNIHCLTK 1007
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + +N AHEM+H SD +F RLGQM+++Y+ P+K
Sbjct: 129 RSYLDLIVTYTSVILLLSRIEDRRILIGTYNCAHEMLHGHSDPSFARLGQMVLEYDHPLK 188
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 189 KLTEEFGPH 197
>gi|148666804|gb|EDK99220.1| RIKEN cDNA 1810048P08, isoform CRA_b [Mus musculus]
Length = 150
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/118 (59%), Positives = 92/118 (77%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 11 EHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIW 70
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQERFR+ITQSYYRSA+ IL YDIS + TF + W+ ++ +YA ++++L+G
Sbjct: 71 DTAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIG 128
>gi|444512842|gb|ELV10184.1| Ras-related protein Rab-43 [Tupaia chinensis]
Length = 212
Score = 155 bits (391), Expect = 1e-34, Method: Composition-based stats.
Identities = 74/164 (45%), Positives = 110/164 (67%), Gaps = 13/164 (7%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+++ +R+KLQIW
Sbjct: 13 QQYDFLFKLVLVGDASVGKTCVVQRFKTGAFAERQGSTIGVDFTMKTLDVQGKRVKLQIW 72
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA IL YDI+ + +F + W+ ++ +YA ++++L+G
Sbjct: 73 DTAGQERFRTITQSYYRSASGAILAYDITKRGSFLSVPRWIEDVRKYAGSGIVQLLIGNK 132
Query: 122 SGLKIVNEMASAAG--------LLCTVDPALATALASDKTDLDE 157
S L + E+ A +LC ++ + A D ++++E
Sbjct: 133 SDLGELREVTLAEAQSLAEHYDILCAIETS-----AKDSSNVEE 171
>gi|344253864|gb|EGW09968.1| Nck-associated protein 1-like [Cricetulus griseus]
Length = 1065
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 101/147 (68%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPGAES+RK R +T MDKLH+ LTEL A+N+ + V++ T P EYL HLE+R +R
Sbjct: 591 KPGAESHRKNRSIVTNMDKLHLNLTELALAMNHVHSFTVFEHTIFPSEYLSSHLEARLNR 650
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
A+V + +N T EI +PSELLA V+AY++ +Q++ ++ D +RV NALLQQTQ +DS
Sbjct: 651 AIVTLAGYNATTQEILRPSELLAGVKAYISFIQSLAQFLGADASRVVRNALLQQTQPLDS 710
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
GE+TV LY WY E LLR+ S +
Sbjct: 711 CGEQTVTTLYTNWYLESLLRQASSGAI 737
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 75/104 (72%)
Query: 563 VYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSL 622
+ ++ ++ D +RV NALLQQTQ +DS GE+TV LY WY E LLR+ S+G I S
Sbjct: 682 IQSLAQFLGADASRVVRNALLQQTQPLDSCGEQTVTTLYTNWYLESLLRQASSGAIVLSP 741
Query: 623 NQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+AF+SL +G F+AEEFSD++E+RALA+++GPYGMK L+E
Sbjct: 742 AMQAFISLPRDGEQNFSAEEFSDISEMRALAEILGPYGMKFLSE 785
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 76/106 (71%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+ES +K I K
Sbjct: 1 MSLTTAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMESSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 106
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 64/98 (65%), Gaps = 5/98 (5%)
Query: 112 KVLRVLVGGTSGLKI---VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLL 166
+ L+ V + +K+ V E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL
Sbjct: 872 ECLKEFVTPDTDIKVTLSVFELASAAGVSCDIDPALVAAIANLKADNSSPEEEYKVACLL 931
Query: 167 MVFVAVCIPKLARNEACFYLASLEGHSNNIHCMARNKI 204
++F+AV +P LA + + FY +G++NNIHC+ + I
Sbjct: 932 LIFLAVSLPLLATDPSSFYSIEKDGYNNNIHCLTKAII 969
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + +N AHEM+H SD +F RLGQM+++Y+ P+K
Sbjct: 129 RSYLDLIVTYTSVILLLSRIEDRRILIGTYNCAHEMLHGHSDPSFARLGQMVLEYDHPLK 188
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 189 KLTEEFGPH 197
>gi|89258445|gb|ABD65446.1| Rab41/43 [Suberites domuncula]
Length = 201
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 91/118 (77%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ Y FLFK+VL+G+AGVGKTC V+RF GV+ G TIGVDFM++TVE++ +RIKLQ+W
Sbjct: 8 DSYDFLFKLVLIGDAGVGKTCAVQRFKHGVYIERYGNTIGVDFMLRTVEVDGKRIKLQVW 67
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQERFR+ITQSYYR AH +I+ YDI+ TF+ +T W+ +++ YA +L+G
Sbjct: 68 DTAGQERFRTITQSYYRGAHGVIVAYDITNAETFNHVTHWIDDVKRYAGNGAQMLLMG 125
>gi|47211718|emb|CAF95873.1| unnamed protein product [Tetraodon nigroviridis]
Length = 182
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 96/124 (77%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ + FLFK++LVG++ VGKTC+V+ F G+F Q TIGVDF ++T++I+ +++K+Q+W
Sbjct: 10 DSFDFLFKIILVGDSNVGKTCVVQSFKSGIFMEKQQNTIGVDFTVRTIDIDGKKVKMQVW 69
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAH ++ YDI+ + TF+ ++ W+RE+E Y + V+ +L+G
Sbjct: 70 DTAGQERFRTITQSYYRSAHGAMVAYDITRRSTFESVSHWIREVEHYGASSVVLILIGNK 129
Query: 122 SGLK 125
S L+
Sbjct: 130 SDLQ 133
>gi|354497240|ref|XP_003510729.1| PREDICTED: nck-associated protein 1-like isoform 1 [Cricetulus
griseus]
Length = 1134
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 101/147 (68%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPGAES+RK R +T MDKLH+ LTEL A+N+ + V++ T P EYL HLE+R +R
Sbjct: 660 KPGAESHRKNRSIVTNMDKLHLNLTELALAMNHVHSFTVFEHTIFPSEYLSSHLEARLNR 719
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
A+V + +N T EI +PSELLA V+AY++ +Q++ ++ D +RV NALLQQTQ +DS
Sbjct: 720 AIVTLAGYNATTQEILRPSELLAGVKAYISFIQSLAQFLGADASRVVRNALLQQTQPLDS 779
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
GE+TV LY WY E LLR+ S +
Sbjct: 780 CGEQTVTTLYTNWYLESLLRQASSGAI 806
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 75/104 (72%)
Query: 563 VYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSL 622
+ ++ ++ D +RV NALLQQTQ +DS GE+TV LY WY E LLR+ S+G I S
Sbjct: 751 IQSLAQFLGADASRVVRNALLQQTQPLDSCGEQTVTTLYTNWYLESLLRQASSGAIVLSP 810
Query: 623 NQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+AF+SL +G F+AEEFSD++E+RALA+++GPYGMK L+E
Sbjct: 811 AMQAFISLPRDGEQNFSAEEFSDISEMRALAEILGPYGMKFLSE 854
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 76/106 (71%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+ES +K I K
Sbjct: 1 MSLTTAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMESSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 106
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 64/98 (65%), Gaps = 5/98 (5%)
Query: 112 KVLRVLVGGTSGLKI---VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLL 166
+ L+ V + +K+ V E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL
Sbjct: 941 ECLKEFVTPDTDIKVTLSVFELASAAGVSCDIDPALVAAIANLKADNSSPEEEYKVACLL 1000
Query: 167 MVFVAVCIPKLARNEACFYLASLEGHSNNIHCMARNKI 204
++F+AV +P LA + + FY +G++NNIHC+ + I
Sbjct: 1001 LIFLAVSLPLLATDPSSFYSIEKDGYNNNIHCLTKAII 1038
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + +N AHEM+H SD +F RLGQM+++Y+ P+K
Sbjct: 129 RSYLDLIVTYTSVILLLSRIEDRRILIGTYNCAHEMLHGHSDPSFARLGQMVLEYDHPLK 188
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 189 KLTEEFGPH 197
>gi|344253374|gb|EGW09478.1| Ras-related protein Rab-43 [Cricetulus griseus]
Length = 201
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 108/164 (65%), Gaps = 13/164 (7%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VL G VGKTC+V+RF GVF QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 2 EHYDFLFKLVLGGEESVGKTCVVQRFKTGVFSARQGSTIGVDFTMKTLEIQGKRVKLQIW 61
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDI+ + TF + W+ ++ +YA ++++L+G
Sbjct: 62 DTAGQERFRTITQSYYRSANGAILAYDITKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNK 121
Query: 122 SGLKIVNE--------MASAAGLLCTVDPALATALASDKTDLDE 157
S L E +A +LC ++ + A D ++++E
Sbjct: 122 SDLADFREVPLTEAQSLAEHYDILCAIETS-----AKDSSNVEE 160
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 193 SNNIHCMARNKIDRED-REIPTEVGEDFAKRHDMY-YLETSAKASDNVEKLFMQIAAELM 250
SN + + NK D D RE+P + A+ +D+ +ETSAK S NVE+ F ++A EL+
Sbjct: 111 SNIVQLLIGNKSDLADFREVPLTEAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATELI 170
>gi|431913720|gb|ELK15210.1| Ras-related protein Rab-43 [Pteropus alecto]
Length = 212
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 110/164 (67%), Gaps = 13/164 (7%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F Q +TIGVDF +KT+EI +R+KLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQSSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDI+ + +F + W+ ++ +YA ++++L+G
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNK 132
Query: 122 SGLKIVNE--MASAAGL------LCTVDPALATALASDKTDLDE 157
S L + E +A A L LC ++ + A D +++E
Sbjct: 133 SDLGELREVPLAEAQSLAEHYDILCAIETS-----AKDSNNVEE 171
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Query: 193 SNNIHCMARNKID-REDREIPTEVGEDFAKRHDMY-YLETSAKASDNVEKLFMQIAAELM 250
SN + + NK D E RE+P + A+ +D+ +ETSAK S+NVE+ F+++A EL+
Sbjct: 122 SNIVQLLIGNKSDLGELREVPLAEAQSLAEHYDILCAIETSAKDSNNVEEAFIRVATELV 181
Query: 251 EK-----LAEKLT 258
+ L+EK T
Sbjct: 182 MRHGGPLLSEKST 194
>gi|432112547|gb|ELK35263.1| Nck-associated protein 1-like protein [Myotis davidii]
Length = 1164
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 107/161 (66%)
Query: 392 KKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAP 451
K+ + KK E KPGAES+RK R +T MDKLH+ LTEL +N+ + V++ T P
Sbjct: 676 KQRQTPKKGEPEREKPGAESHRKNRSIVTNMDKLHVNLTELALTMNHVHSFSVFEHTIFP 735
Query: 452 REYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRV 511
EYL HLE+R +RA+V + +N T EIA+PSELLA V+AY++ +Q++ + D++RV
Sbjct: 736 SEYLSSHLEARLNRAIVCLAGYNATTQEIARPSELLAGVKAYISFIQSLAQILGADVSRV 795
Query: 512 FNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
NALLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 796 IRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTI 836
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 70/94 (74%)
Query: 573 DMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSLNQRAFVSLTA 632
D++RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S+G I S +AFVSL
Sbjct: 791 DVSRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTIILSPAMQAFVSLPR 850
Query: 633 EGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
E F+AEEFSD++E+RALA+L+GPYGMK L+E
Sbjct: 851 EEEQHFSAEEFSDISEMRALAELLGPYGMKFLSE 884
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+ES +K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMESSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +++I+K L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKTEIIKLLTNYYQSFVDVMEFRDHVY 106
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 64/98 (65%), Gaps = 5/98 (5%)
Query: 112 KVLRVLVGGTSGLKI---VNEMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLL 166
+ L+ V + +K+ + E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL
Sbjct: 971 ECLKEFVTPDTDIKVTLSIFELASAAGVGCDIDPALVAAIANLKADTSSLEEEYKVACLL 1030
Query: 167 MVFVAVCIPKLARNEACFYLASLEGHSNNIHCMARNKI 204
++F+AV +P LA + + FY +G++NNIHC+ + I
Sbjct: 1031 LIFLAVSLPLLATDPSSFYSIEKDGYNNNIHCLTKAII 1068
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L L + +N AHEM+H SD +FPRL QM+++Y+ P+K
Sbjct: 129 RSYLDLIVTYTSVILLLSRIEDRRLLIGVYNCAHEMLHGHSDPSFPRLSQMVLEYDHPLK 188
Query: 703 KLSEEFIPHD--SMRPMRWFI 721
KL+EEF PH S R R F+
Sbjct: 189 KLTEEFGPHTKASSRESREFL 209
>gi|291389306|ref|XP_002711084.1| PREDICTED: NCK-associated protein 1-like [Oryctolagus cuniculus]
Length = 1134
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 105/161 (65%)
Query: 392 KKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAP 451
K+ + +K E KPGAES+RK R +T MDKLH+ LTEL +N+ + V++ T P
Sbjct: 646 KQRQTPRKGEPERDKPGAESHRKNRSIVTNMDKLHLTLTELALTMNHVHSFSVFEHTIFP 705
Query: 452 REYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRV 511
EYL HLE+R +RA+V + +N T EI +PSELLA V+AY+ +Q++ +V D +R+
Sbjct: 706 AEYLSSHLETRLNRAIVWLAGYNASTQEIVRPSELLAGVKAYIGFIQSLAQFVGADASRI 765
Query: 512 FNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
NALLQQTQ +DS G++T+ LY WY E LLR+ S +
Sbjct: 766 IRNALLQQTQPLDSSGDQTITTLYTNWYLESLLRQASSGTI 806
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 75/104 (72%)
Query: 563 VYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSL 622
+ ++ +V D +R+ NALLQQTQ +DS G++T+ LY WY E LLR+ S+G I S
Sbjct: 751 IQSLAQFVGADASRIIRNALLQQTQPLDSSGDQTITTLYTNWYLESLLRQASSGTILLSP 810
Query: 623 NQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+AFVSL EG F+AEE+SD++E+RALA+L+GPYGMK L+E
Sbjct: 811 AMQAFVSLPREGEQSFSAEEYSDISEMRALAELLGPYGMKFLSE 854
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKL+I++DRG G+L R+YNI+K C D KSKP FL +KS+ES +K I K
Sbjct: 1 MSLTSTYQHKLAEKLSILNDRGQGVLIRMYNIRKTCSDPKSKPPFLLEKSMESSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 106
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 56/80 (70%), Gaps = 2/80 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTDL--DEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL+VF+AV +P LA + + F
Sbjct: 959 VFELASAAGVGCDIDPALVAAIANLKADSTSPEEEYKVACLLLVFLAVSLPLLATDPSSF 1018
Query: 185 YLASLEGHSNNIHCMARNKI 204
Y +G++NNIHC+ + I
Sbjct: 1019 YSIEKDGYNNNIHCLTKAII 1038
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L L + +N AHEM+H D +F RLGQM+++Y+ P+K
Sbjct: 129 RSYLDLIVTYTSVILLLSRIEDRRLLIGMYNCAHEMLHGHGDPSFARLGQMVLEYDHPLK 188
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 189 KLTEEFGPH 197
>gi|242004508|ref|XP_002423125.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212506071|gb|EEB10387.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 210
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 108/166 (65%), Gaps = 2/166 (1%)
Query: 2 EDY-KFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
+DY FLFK+VL+G+ G GKTC+V+RF G F G TIGVDF +K V ++ +++KLQI
Sbjct: 4 DDYCDFLFKIVLIGDCGAGKTCVVQRFKTGAFVERHGNTIGVDFSMKNVVVDGKKVKLQI 63
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGG 120
WDTAGQERFR+ITQSYYRSA+ +I+VYDI+ + +F L W+ E+ YA+ VL VLVG
Sbjct: 64 WDTAGQERFRTITQSYYRSANGVIIVYDITKRSSFLSLERWIEEVRRYAATNVLLVLVGN 123
Query: 121 TSGLKIVNEMA-SAAGLLCTVDPALATALASDKTDLDEDEHVLACL 165
S L+ + E+ S A +C P + L + + E CL
Sbjct: 124 KSDLENLREVEFSEAEAMCEFIPEVLCVLEASAKENTNIEDAFLCL 169
>gi|426372848|ref|XP_004053326.1| PREDICTED: nck-associated protein 1-like [Gorilla gorilla gorilla]
Length = 1127
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 110/174 (63%), Gaps = 9/174 (5%)
Query: 379 RKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINY 438
+KTR++ Q + + +++ KPGAES+RK R +T MDKLH LTEL +N+
Sbjct: 642 KKTRKQRQTPRKGEPERD---------KPGAESHRKNRSIVTNMDKLHQNLTELALTMNH 692
Query: 439 CTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQ 498
+ V++ T P EYL HLE+R +RA+V + +N T EI +PSELLA V+AY+ +Q
Sbjct: 693 VYSFSVFEHTIFPSEYLSSHLEARLNRAIVWLAGYNATTQEIIRPSELLAGVKAYIGFIQ 752
Query: 499 TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 753 SLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTI 806
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 75/104 (72%)
Query: 563 VYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSL 622
+ ++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S+G I S
Sbjct: 751 IQSLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTIILSP 810
Query: 623 NQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+AF+SL EG F+AEEFSD++E+RALA+L+GPYGMK L++
Sbjct: 811 AMQAFISLPREGEQNFSAEEFSDISEMRALAELLGPYGMKFLSD 854
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 76/106 (71%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+E +K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMEPSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 106
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + FY
Sbjct: 961 ELASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSLPLLATDPSSFYS 1020
Query: 187 ASLEGHSNNIHCMARNKI 204
+G++NNIHC+ + I
Sbjct: 1021 IEKDGYNNNIHCLTKAII 1038
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + +N AHEM+H D +F RLGQM+++Y+ P+K
Sbjct: 129 RSYLDLIVTYTSVILLLSRIEDRRILIGMYNCAHEMLHGHGDPSFARLGQMVLEYDHPLK 188
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 189 KLTEEFGPH 197
>gi|149036669|gb|EDL91287.1| Ras-related protein RAB43, isoform CRA_b [Rattus norvegicus]
Length = 157
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/137 (54%), Positives = 98/137 (71%), Gaps = 3/137 (2%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 11 EHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIW 70
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDIS + TF + W+ ++ +YA ++++L+G
Sbjct: 71 DTAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIG-- 128
Query: 122 SGLKIVNEMASAAGLLC 138
L +V E LC
Sbjct: 129 -ELGMVAEGVWGKPYLC 144
>gi|289741111|gb|ADD19303.1| Rab-related protein 3 [Glossina morsitans morsitans]
Length = 219
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 92/124 (74%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ FLFK+VL+G+AG GKTC+V RF G F QG TIGVDF +KT+ + + +KLQIW
Sbjct: 16 ENFDFLFKIVLIGDAGTGKTCIVERFKTGNFIERQGNTIGVDFSMKTINVEGKLVKLQIW 75
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ +I+VYD++ + TF L W+ E+ Y + V+ +LVG
Sbjct: 76 DTAGQERFRTITQSYYRSANGVIIVYDVTRRDTFANLQKWIEEVRHYTASNVMLILVGNK 135
Query: 122 SGLK 125
S L+
Sbjct: 136 SDLE 139
>gi|146422886|ref|XP_001487377.1| GTP-binding protein YPTC1 [Meyerozyma guilliermondii ATCC 6260]
gi|146388498|gb|EDK36656.1| GTP-binding protein YPTC1 [Meyerozyma guilliermondii ATCC 6260]
Length = 207
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 100/133 (75%), Gaps = 3/133 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y FLFK++L+G++GVGK+CL+ RF + P +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDFLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA+ V+++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 123 GL---KIVNEMAS 132
L KIV A+
Sbjct: 124 DLSDKKIVEYTAA 136
>gi|431921593|gb|ELK18945.1| Nck-associated protein 1-like protein [Pteropus alecto]
Length = 1111
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 101/147 (68%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPGAES+RK R +T MDKLH+ LTEL +N+ + V++ T P EYL HLE+R +R
Sbjct: 637 KPGAESHRKNRSIVTNMDKLHVNLTELALTMNHVHSFSVFEHTIFPSEYLSSHLEARLNR 696
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
A+V + +N T EIA+PSELLA V+AY++ +Q++ ++ D++RV NALLQQTQ +DS
Sbjct: 697 AIVWLAGYNATTQEIARPSELLAGVKAYISFIQSLAQFLGADVSRVIRNALLQQTQPLDS 756
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
GE+T+ Y WY E LLR+ S +
Sbjct: 757 CGEQTITTFYTNWYLESLLRQASSGTI 783
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 108/180 (60%), Gaps = 7/180 (3%)
Query: 491 RAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV--AALYIQWYSEVL--LRR 546
+ ++N+ + H+ VF + + ++ + SH E + A +++ Y+ + R
Sbjct: 655 KLHVNLTELALTMNHVHSFSVFEHTIFP-SEYLSSHLEARLNRAIVWLAGYNATTQEIAR 713
Query: 547 VSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYS 606
SE ++F++ ++ ++ D++RV NALLQQTQ +DS GE+T+ Y WY
Sbjct: 714 PSELLAGVKAYISFIQ--SLAQFLGADVSRVIRNALLQQTQPLDSCGEQTITTFYTNWYL 771
Query: 607 EVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
E LLR+ S+G I S +AF+SL EG F+AEEFSD++E+RALA+L+GPYGMK L+E
Sbjct: 772 ESLLRQASSGTIILSPAMQAFISLPREGEQNFSAEEFSDISEMRALAELLGPYGMKFLSE 831
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 78/106 (73%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D+K+KP FL +KS+ES +K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDSKAKPPFLLEKSMESSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQQLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 106
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Query: 112 KVLRVLVGGTSGLKI---VNEMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLL 166
+ L+ V + +K+ V E+ASAAG+ C +DP L A+A+ K D E+E+ +ACLL
Sbjct: 918 ECLKEFVTPDTDIKVTLSVFELASAAGVGCDIDPTLVAAIANLKADTSSSEEEYKVACLL 977
Query: 167 MVFVAVCIPKLARNEACFYLASLEGHSNNIHCMARNKI 204
++F+AV +P LA + + FY +G++NNIHC+ + I
Sbjct: 978 LIFLAVSLPLLATDPSSFYCIEKDGYNNNIHCLTKAII 1015
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + +N AHEM H +D +F RL QMI++Y+ P+K
Sbjct: 129 RSYLDLIVTYTSVILLLSRIEDRRVLIGVYNCAHEMTHGHTDSSFARLAQMILEYDHPLK 188
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 189 KLTEEFGPH 197
>gi|297262581|ref|XP_002798677.1| PREDICTED: nck-associated protein 1-like [Macaca mulatta]
Length = 1092
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 105/161 (65%)
Query: 392 KKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAP 451
K+ + +K E KPGAES+RK R +T MDKLH+ LTEL +N+ + V++ T P
Sbjct: 604 KQRQTPRKGEPERDKPGAESHRKNRSIVTNMDKLHLNLTELALTMNHVYSFSVFEHTLFP 663
Query: 452 REYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRV 511
EYL HLE+R +RA+V + +N T EI +PSELLA V+AY+ +Q++ ++ D +RV
Sbjct: 664 SEYLSSHLEARLNRAIVWLAGYNATTQEIVRPSELLAGVKAYIGFIQSLAQFLGADASRV 723
Query: 512 FNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
NALLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 724 IRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTI 764
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 109/183 (59%), Gaps = 13/183 (7%)
Query: 491 RAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV--AALYIQWYSEVLLRRVS 548
+ ++N+ + H+ VF + L ++ + SH E + A +++ Y+ +
Sbjct: 636 KLHLNLTELALTMNHVYSFSVFEHTLFP-SEYLSSHLEARLNRAIVWLAGYNAT-----T 689
Query: 549 ETQVKSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQ 603
+ V+ LL ++ Y ++ ++ D +RV NALLQQTQ +DS GE+T+ LY
Sbjct: 690 QEIVRPSELLAGVKAYIGFIQSLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTN 749
Query: 604 WYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKL 663
WY E LLR+ S+G I FS +AFVSL EG F+AEEFSD++E+RALA+L+GPYGMK
Sbjct: 750 WYLESLLRQASSGTIIFSPAMQAFVSLPREGEQNFSAEEFSDISEMRALAELLGPYGMKF 809
Query: 664 LNE 666
L+E
Sbjct: 810 LSE 812
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 76/106 (71%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+E +K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMEPSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 106
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + FY
Sbjct: 919 ELASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSLPFLATDPSSFYS 978
Query: 187 ASLEGHSNNIHCMARNKI 204
+G++NNIHC+ + I
Sbjct: 979 IEKDGYNNNIHCLTKAII 996
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + +N AHEM+H D +F RLGQM+++Y+ P+K
Sbjct: 129 RSYLDLIVTYTSVILLLSRIEDRRILIGMYNCAHEMLHGHGDPSFARLGQMVLEYDHPLK 188
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 189 KLTEEFGPH 197
>gi|170588923|ref|XP_001899223.1| Ras family protein [Brugia malayi]
gi|158593436|gb|EDP32031.1| Ras family protein [Brugia malayi]
Length = 209
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 115/173 (66%), Gaps = 13/173 (7%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ + FLFK+VL+G+ GVGKTC+V+RF G F QG TIGVDF +KT+ I +R+KLQIW
Sbjct: 5 DSFDFLFKIVLIGDMGVGKTCVVQRFKNGTFIERQGTTIGVDFSMKTMIIEGKRVKLQIW 64
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DT GQERFR+ITQSYYRSA+ ++L YD++C+ +F+ L WL ++ ++A+ V ++LV
Sbjct: 65 DTGGQERFRTITQSYYRSANGILLCYDLTCRQSFESLHRWLDDVSKFAAPNVCKILVATK 124
Query: 122 SGL---KIV-----NEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLL 166
+ L ++V +E+A+A G+ ++ + L D L+ LAC L
Sbjct: 125 ADLENERLVERDEGSELANANGMCIFIETSSKNNLNVDNAFLE-----LACQL 172
>gi|402886266|ref|XP_003906555.1| PREDICTED: nck-associated protein 1-like [Papio anubis]
Length = 1133
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 105/161 (65%)
Query: 392 KKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAP 451
K+ + +K E KPGAES+RK R +T MDKLH+ LTEL +N+ + V++ T P
Sbjct: 645 KQRQTPRKGEPERDKPGAESHRKNRSIVTNMDKLHLNLTELALTMNHVYSFSVFEHTLFP 704
Query: 452 REYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRV 511
EYL HLE+R +RA+V + +N T EI +PSELLA V+AY+ +Q++ ++ D +RV
Sbjct: 705 SEYLSSHLEARLNRAIVWLAGYNATTQEIVRPSELLAGVKAYIGFIQSLAQFLGADASRV 764
Query: 512 FNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
NALLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 765 IRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTI 805
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 109/183 (59%), Gaps = 13/183 (7%)
Query: 491 RAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV--AALYIQWYSEVLLRRVS 548
+ ++N+ + H+ VF + L ++ + SH E + A +++ Y+ +
Sbjct: 677 KLHLNLTELALTMNHVYSFSVFEHTLFP-SEYLSSHLEARLNRAIVWLAGYNAT-----T 730
Query: 549 ETQVKSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQ 603
+ V+ LL ++ Y ++ ++ D +RV NALLQQTQ +DS GE+T+ LY
Sbjct: 731 QEIVRPSELLAGVKAYIGFIQSLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTN 790
Query: 604 WYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKL 663
WY E LLR+ S+G I FS +AFVSL EG F+AEEFSD++E+RALA+L+GPYGMK
Sbjct: 791 WYLESLLRQASSGTIIFSPAMQAFVSLPREGEQNFSAEEFSDISEMRALAELLGPYGMKF 850
Query: 664 LNE 666
L+E
Sbjct: 851 LSE 853
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 76/106 (71%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+E +K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMEPSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 106
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + FY
Sbjct: 960 ELASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSLPFLATDPSSFYS 1019
Query: 187 ASLEGHSNNIHCMARNKI 204
+G++NNIHC+ + I
Sbjct: 1020 IEKDGYNNNIHCLTKAII 1037
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + +N AHEM+H D +F RLGQM+++Y+ P+K
Sbjct: 129 RSYLDLIVTYTSVILLLSRIEDRRILIGMYNCAHEMLHGHGDPSFARLGQMVLEYDHPLK 188
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 189 KLTEEFGPH 197
>gi|403216071|emb|CCK70569.1| hypothetical protein KNAG_0E03100 [Kazachstania naganishii CBS
8797]
Length = 212
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 110/163 (67%), Gaps = 14/163 (8%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+GN+GVGK+CL+ RF+ + +TIGVDF IKTVE++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR +H +I+VYD++ Q +FD + WL+EI+ YA+ VL++LVG
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQDSFDGVKMWLQEIDRYATSTVLKLLVGNKC 123
Query: 123 GLK--------IVNEMASAAGLLCTVDPALATALASDKTDLDE 157
L + E A A + P L T+ A D T+++E
Sbjct: 124 DLNDKRVVEYDVAKEFADANNM-----PFLETS-ALDSTNVEE 160
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 196 IHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
+ + NK D D R + +V ++FA ++M +LETSA S NVE+ F+ +A ++ E +A
Sbjct: 115 LKLLVGNKCDLNDKRVVEYDVAKEFADANNMPFLETSALDSTNVEEAFLTMARQIKESMA 174
Query: 255 EK 256
++
Sbjct: 175 QQ 176
>gi|355564308|gb|EHH20808.1| Membrane-associated protein HEM-1 [Macaca mulatta]
gi|355786162|gb|EHH66345.1| Membrane-associated protein HEM-1 [Macaca fascicularis]
Length = 1148
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 105/161 (65%)
Query: 392 KKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAP 451
K+ + +K E KPGAES+RK R +T MDKLH+ LTEL +N+ + V++ T P
Sbjct: 660 KQRQTPRKGEPERDKPGAESHRKNRSIVTNMDKLHLNLTELALTMNHVYSFSVFEHTLFP 719
Query: 452 REYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRV 511
EYL HLE+R +RA+V + +N T EI +PSELLA V+AY+ +Q++ ++ D +RV
Sbjct: 720 SEYLSSHLEARLNRAIVWLAGYNATTQEIVRPSELLAGVKAYIGFIQSLAQFLGADASRV 779
Query: 512 FNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
NALLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 780 IRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTI 820
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 109/183 (59%), Gaps = 13/183 (7%)
Query: 491 RAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV--AALYIQWYSEVLLRRVS 548
+ ++N+ + H+ VF + L ++ + SH E + A +++ Y+ +
Sbjct: 692 KLHLNLTELALTMNHVYSFSVFEHTLFP-SEYLSSHLEARLNRAIVWLAGYNAT-----T 745
Query: 549 ETQVKSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQ 603
+ V+ LL ++ Y ++ ++ D +RV NALLQQTQ +DS GE+T+ LY
Sbjct: 746 QEIVRPSELLAGVKAYIGFIQSLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTN 805
Query: 604 WYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKL 663
WY E LLR+ S+G I FS +AFVSL EG F+AEEFSD++E+RALA+L+GPYGMK
Sbjct: 806 WYLESLLRQASSGTIIFSPAMQAFVSLPREGEQNFSAEEFSDISEMRALAELLGPYGMKF 865
Query: 664 LNE 666
L+E
Sbjct: 866 LSE 868
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 76/106 (71%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+E +K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMEPSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 106
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + FY
Sbjct: 975 ELASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSLPFLATDPSSFYS 1034
Query: 187 ASLEGHSNNIHCMARNKI 204
+G++NNIHC+ + I
Sbjct: 1035 IEKDGYNNNIHCLTKAII 1052
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + +N AHEM+H D +F RLGQM+++Y+ P+K
Sbjct: 129 RSYLDLIVTYTSVILLLSRIEDRRILIGMYNCAHEMLHGHGDPSFARLGQMVLEYDHPLK 188
Query: 703 KLSEEFIPHDSMRPMR 718
KL+EEF PH +R
Sbjct: 189 KLTEEFGPHTKASSLR 204
>gi|332261803|ref|XP_003279956.1| PREDICTED: ras-related protein Rab-43 isoform 4 [Nomascus
leucogenys]
Length = 155
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/146 (49%), Positives = 104/146 (71%), Gaps = 4/146 (2%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDI+ + +F + W+ ++ +YA ++++L+
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIEMQ 132
Query: 122 SGLKIVNEMASAAGLLCTVDPALATA 147
S + ++ LL + +P+ +T+
Sbjct: 133 SCYVVQADLE----LLASSNPSASTS 154
>gi|354481757|ref|XP_003503067.1| PREDICTED: ras-related protein Rab-19-like [Cricetulus griseus]
Length = 217
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 125/197 (63%), Gaps = 23/197 (11%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E+ +LFKV+L+G++ VGKTC+V+ F GV+ Q TIGVDF ++++EI+ +++K+Q+W
Sbjct: 12 ENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNK 131
Query: 122 SGL----KIVNE----MASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVC 173
S L +++ E +A GLL ++ + A + ++DE VFV +
Sbjct: 132 SNLWENRRVLFEDACTLAEKYGLLAVLETS-----AKESRNIDE----------VFVLMA 176
Query: 174 IPKLARNEACFYLASLE 190
+ARN Y S++
Sbjct: 177 KELIARNSLHLYGESIQ 193
>gi|344241420|gb|EGV97523.1| Ras-related protein Rab-8A [Cricetulus griseus]
Length = 236
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 140/255 (54%), Gaps = 54/255 (21%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE LRV G G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEE------LRVQQWGV-G 117
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEAC 183
+ ++ +AA L P A+A D ++ +L
Sbjct: 118 YQPLSSPHTAAVTLIIRSPQHASA--------DVEKMILG-------------------- 149
Query: 184 FYLASLEGHSNNIHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLF 242
NK D D R++ E GE A + + ++ETSAKA+ NVE F
Sbjct: 150 ------------------NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAF 191
Query: 243 MQIAAELMEKLAEKL 257
+A ++ K+ +KL
Sbjct: 192 FTLARDIKAKMDKKL 206
>gi|367000740|ref|XP_003685105.1| hypothetical protein TPHA_0D00270 [Tetrapisispora phaffii CBS 4417]
gi|357523403|emb|CCE62671.1| hypothetical protein TPHA_0D00270 [Tetrapisispora phaffii CBS 4417]
Length = 207
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 95/122 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+GN+GVGK+CL+ RF+ + +TIGVDF IKTVE++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR +H +I+VYD++ Q +F+ + WL+EI+ YA+ VL++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNSVKMWLQEIDRYATSTVLKLLVGNKS 123
Query: 123 GL 124
+
Sbjct: 124 DM 125
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 196 IHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
+ + NK D D R + +V ++FA+++ M +LETSA S NVE+ F+ +A ++ E ++
Sbjct: 115 LKLLVGNKSDMTDKRVVEYDVAKEFAEQNKMPFLETSALDSTNVEEAFLTMARQIKESIS 174
Query: 255 EKLTIMHDRG 264
+ I G
Sbjct: 175 HQQQIEMKSG 184
>gi|50413456|ref|XP_457265.1| DEHA2B07062p [Debaryomyces hansenii CBS767]
gi|49652930|emb|CAG85266.1| DEHA2B07062p [Debaryomyces hansenii CBS767]
Length = 208
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 115/164 (70%), Gaps = 4/164 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + P +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA+ V+++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 123 GL--KIVNEMASAAGLLCTVD-PALATALASDKTDLDEDEHVLA 163
L K V E +A +D P L T+ S T++++ + +A
Sbjct: 124 DLSDKKVVEYTAAKEFADALDIPFLETSALS-STNVEQAFYTMA 166
>gi|112005093|gb|ABH85387.1| putative GTP binding protein [Beta vulgaris]
Length = 202
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/123 (55%), Positives = 93/123 (75%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+DY +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIW
Sbjct: 3 QDYDYLFKLLLIGDSGVGKSCLLLRFADDSYVESYISTIGVDFKIRTVEQDGKTIKLQIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+IT SYYR AH +I+VYD++ Q +FD + WL EI+ YAS V+++LVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTDQQSFDNVKQWLNEIDRYASDNVVKILVGNK 122
Query: 122 SGL 124
S L
Sbjct: 123 SDL 125
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 194 NNIHCMARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
N + + NK D ++ + +E + FA + +LETSAK S NVE+ FM +AAE+ ++
Sbjct: 113 NVVKILVGNKSDLTSNKVVSSETAKAFADEIGIPFLETSAKNSTNVEQAFMTMAAEIKKR 172
Query: 253 LAEK 256
+A +
Sbjct: 173 VASQ 176
>gi|241948557|ref|XP_002417001.1| RAB-family small GTP-binding protein, putative; YPT1-like RAB
GTPase, putative; transport GTPase, putative [Candida
dubliniensis CD36]
gi|223640339|emb|CAX44589.1| RAB-family small GTP-binding protein, putative [Candida
dubliniensis CD36]
Length = 207
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 100/133 (75%), Gaps = 3/133 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + P +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA+ V+++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 123 GL---KIVNEMAS 132
L KIV A+
Sbjct: 124 DLSDKKIVEYTAA 136
>gi|410730291|ref|XP_003671325.2| hypothetical protein NDAI_0G03050 [Naumovozyma dairenensis CBS 421]
gi|401780143|emb|CCD26082.2| hypothetical protein NDAI_0G03050 [Naumovozyma dairenensis CBS 421]
Length = 210
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 93/117 (79%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+GN+GVGK+CL+ RF+ + +TIGVDF IKTVE++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR +H +I+VYD++ Q +FD + WL+EI+ YA+ VL++LVG
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQDSFDGVKMWLQEIDRYATSTVLKLLVG 120
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 196 IHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
+ + NK D ED R + +V ++FA + M +LETSA S NVE+ F+ +A ++ E +
Sbjct: 115 LKLLVGNKCDLEDKRVVEYDVAKEFADSNKMPFLETSALNSTNVEEAFLTMARQIKESMN 174
Query: 255 EK 256
++
Sbjct: 175 QQ 176
>gi|301612394|ref|XP_002935704.1| PREDICTED: nck-associated protein 1-like [Xenopus (Silurana)
tropicalis]
Length = 1123
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 107/160 (66%)
Query: 389 SRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFT 448
++R K K+ E KPGAES R+ R T +DKLH+ L EL A+N+ +I+V++
Sbjct: 641 NKRLKKPPPKRAEPEREKPGAESQRRDRSVTTNLDKLHLTLCELSMALNHVRSIRVFEHV 700
Query: 449 FAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDM 508
P EYL HLE+RF RALV MV F T EI +PSE+L +R+Y++ L+++ + V+ID+
Sbjct: 701 VTPAEYLSSHLENRFGRALVNMVNFKQTTREILRPSEVLHGMRSYLSTLKSIGHLVNIDV 760
Query: 509 TRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVS 548
TR+ ++LLQQTQ D++GE T+ ALY WY E LLR+ S
Sbjct: 761 TRIIRSSLLQQTQPTDANGEPTITALYTNWYLECLLRQAS 800
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 102/169 (60%), Gaps = 11/169 (6%)
Query: 505 HIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQVKSLNLLNFLRVY 564
H+ RVF + ++ + + SH E + V ++ + ++ +L+ +R Y
Sbjct: 690 HVRSIRVFEH-VVTPAEYLSSHLENRFGRALVNM---VNFKQTTREILRPSEVLHGMRSY 745
Query: 565 -----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNIC 619
++ + V+ID+TR+ ++LLQQTQ D++GE T+ ALY WY E LLR+ SAG I
Sbjct: 746 LSTLKSIGHLVNIDVTRIIRSSLLQQTQPTDANGEPTITALYTNWYLECLLRQASAGFII 805
Query: 620 FSLNQRAFVSLTAE--GAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+S +R F+ L E G NAEE+SDV+E++AL++LIGPYGMK L+E
Sbjct: 806 YSPARRTFMDLPTEMSGEQGLNAEEYSDVSEMKALSELIGPYGMKFLSE 854
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 76/106 (71%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKL I++DRG G+L RIYNIKK C + K+KP F ++KS+ES IK I K
Sbjct: 1 MSLGSVYQHKLAEKLMILNDRGKGVLIRIYNIKKTCSETKTKPPFFTEKSMESSIKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID++S + + + +S+IVK LS YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRSSTQHLGPVHKEKSEIVKCLSSYYLSFVDVMEFRDHVY 106
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFY 185
E+A+AAG+ C VDP+L AL++ KTD E+E+ +ACLL VF+AV +P LA + FY
Sbjct: 961 ELATAAGVPCDVDPSLVAALSNIKTDSASLEEEYKVACLLQVFLAVSLPLLASDPMSFY 1019
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
FN A EM+ SD + RL QM+++Y+ P+KKLSEEF PH
Sbjct: 158 FNCASEMLQGHSDPTYARLAQMLLEYDNPLKKLSEEFGPH 197
>gi|448081057|ref|XP_004194794.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
gi|359376216|emb|CCE86798.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
Length = 208
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 107/151 (70%), Gaps = 3/151 (1%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + P +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA+ V+++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 123 GL--KIVNEMASAAGLLCTVD-PALATALAS 150
L K V E +A +D P L T+ S
Sbjct: 124 DLSDKKVVEYTAAKEFADALDIPFLETSALS 154
>gi|325910899|ref|NP_001191816.1| ras-related protein Rab-43 isoform b [Homo sapiens]
gi|426342032|ref|XP_004036320.1| PREDICTED: ras-related protein Rab-43 isoform 3 [Gorilla gorilla
gorilla]
Length = 155
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 67/117 (57%), Positives = 91/117 (77%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLV 118
DTAGQERFR+ITQSYYRSA+ IL YDI+ + +F + W+ ++ +YA ++++L+
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLI 129
>gi|345492946|ref|XP_003426961.1| PREDICTED: ras-related protein Rab-43-like [Nasonia vitripennis]
Length = 221
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 108/168 (64%), Gaps = 7/168 (4%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E + +LFK+VL+G+ G GKTC+V++F G F G TIGVDF +KTV ++ +R+KLQIW
Sbjct: 17 EGFDYLFKIVLIGDCGTGKTCIVQKFRSGNFIQRHGNTIGVDFSMKTVLVDGKRVKLQIW 76
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ +ILVYDI+ + +F L W+ EI Y S VL +LVG
Sbjct: 77 DTAGQERFRTITQSYYRSANGVILVYDITKRSSFLSLQRWIDEIRRYTSSHVLLILVGNK 136
Query: 122 SGLKIVNEMASA-AGLLCTVDPA---LATALASDKTDLDEDEHVLACL 165
L+ E+ A A +C P + A + T++D + CL
Sbjct: 137 CDLEDAREVQKAEAEAVCEYLPEVFRIVETSAKENTNIDS---IFFCL 181
>gi|344304693|gb|EGW34925.1| hypothetical protein SPAPADRAFT_133146 [Spathaspora passalidarum
NRRL Y-27907]
Length = 207
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 100/133 (75%), Gaps = 3/133 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + P +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA+ V+++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 123 GL---KIVNEMAS 132
L KIV A+
Sbjct: 124 DLSDKKIVEYTAA 136
>gi|448519756|ref|XP_003868152.1| Ypt1 protein [Candida orthopsilosis Co 90-125]
gi|380352491|emb|CCG22717.1| Ypt1 protein [Candida orthopsilosis]
Length = 207
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 100/133 (75%), Gaps = 3/133 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + P +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA+ V+++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 123 GL---KIVNEMAS 132
L KIV A+
Sbjct: 124 DLADKKIVEYTAA 136
>gi|344234197|gb|EGV66067.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 205
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 107/151 (70%), Gaps = 3/151 (1%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + P +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA+ V+++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 123 GL--KIVNEMASAAGLLCTVD-PALATALAS 150
L K V E +A +D P L T+ S
Sbjct: 124 DLSDKKVVEYTAAKEFADALDIPFLETSALS 154
>gi|68468983|ref|XP_721550.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|68469532|ref|XP_721279.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|15077428|gb|AAK83158.1|AF330211_1 small GTP-binding protein Ypt1p [Candida albicans]
gi|46443188|gb|EAL02472.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|46443470|gb|EAL02752.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|238879175|gb|EEQ42813.1| GTP-binding protein YPT1 [Candida albicans WO-1]
Length = 207
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 100/133 (75%), Gaps = 3/133 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + P +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA+ V+++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 123 GL---KIVNEMAS 132
L KIV A+
Sbjct: 124 DLSDKKIVEYTAA 136
>gi|448085540|ref|XP_004195885.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
gi|359377307|emb|CCE85690.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
Length = 208
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 107/151 (70%), Gaps = 3/151 (1%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + P +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA+ V+++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 123 GL--KIVNEMASAAGLLCTVD-PALATALAS 150
L K V E +A +D P L T+ S
Sbjct: 124 DLSDKKVVEYTAAKEFADALDIPFLETSALS 154
>gi|291220854|ref|XP_002730440.1| PREDICTED: RAB family member (rab-19)-like [Saccoglossus
kowalevskii]
Length = 212
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 115/164 (70%), Gaps = 13/164 (7%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ + FLFK+VL+G+AGVGKTC+V+RF G F Q +TIGVDF +KT+ I+ +++KLQ+W
Sbjct: 11 DSFDFLFKIVLIGDAGVGKTCVVQRFKSGTFLEKQHSTIGVDFTMKTLHIDGKKVKLQVW 70
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ +I+ YDI+ + +F+ + W+ ++++YA V+++L+G
Sbjct: 71 DTAGQERFRTITQSYYRSANGVIIAYDITKRESFNNVPRWVEDVKKYAGANVMQMLIGNK 130
Query: 122 SGLKIVNE--------MASAAGLLCTVDPALATALASDKTDLDE 157
L+ + E +A G+L +++ + A D T+++E
Sbjct: 131 RDLESLREVTVSDAKALAHHHGMLESLETS-----AKDSTNVEE 169
>gi|440900701|gb|ELR51779.1| Nck-associated protein 1-like protein [Bos grunniens mutus]
Length = 1142
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 101/147 (68%), Gaps = 2/147 (1%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPGAES+RK R +T MDKLH+ LTEL +N+ + V++ T P EYL HLE+RF
Sbjct: 670 KPGAESHRKNRSVVTNMDKLHLNLTELALTMNHVQSFSVFEHTIFPSEYLSSHLEARF-- 727
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
A+V + +N T EIA+PSELLA V+AY++ +Q++ ++ D++RV NALLQQTQ +DS
Sbjct: 728 AIVWLAGYNATTQEIARPSELLAGVKAYISFIQSLAQFLGADVSRVIRNALLQQTQPLDS 787
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
GE+T+ LY WY E LLR+ S +
Sbjct: 788 SGEQTITTLYTNWYLESLLRQASSGTI 814
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 108/178 (60%), Gaps = 5/178 (2%)
Query: 491 RAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVL--LRRVS 548
+ ++N+ + H+ VF + + ++ + SH E A +++ Y+ + R S
Sbjct: 688 KLHLNLTELALTMNHVQSFSVFEHTIFP-SEYLSSHLEARFAIVWLAGYNATTQEIARPS 746
Query: 549 ETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEV 608
E ++F++ ++ ++ D++RV NALLQQTQ +DS GE+T+ LY WY E
Sbjct: 747 ELLAGVKAYISFIQ--SLAQFLGADVSRVIRNALLQQTQPLDSSGEQTITTLYTNWYLES 804
Query: 609 LLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+ S+G I S +AF+SL EG F+AEEFSDV+E+RALA+L+GPYGMK L+E
Sbjct: 805 LLRQASSGTIILSPAMQAFISLPREGEQNFSAEEFSDVSEMRALAELLGPYGMKFLSE 862
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+ES +K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMESSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +S+I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKSEIIRYLTNYYQSFVDVMEFRDHVY 106
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ KTDL E+E+ +ACLL++F+AV +P LA + A FY
Sbjct: 969 ELASAAGVDCDIDPALVAAIANLKTDLSSPEEEYKVACLLLIFLAVSLPLLAMDAASFYS 1028
Query: 187 ASLEGHSNNIHCMARNKI 204
+G+SNNIHC+ + I
Sbjct: 1029 IEKDGYSNNIHCLTKAII 1046
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSMR 715
FN AHEM+H SD +F RLGQM+++Y+ P+KKL+EEF PH R
Sbjct: 158 FNCAHEMLHGHSDSSFARLGQMVLEYDHPLKKLTEEFGPHTKAR 201
>gi|254570669|ref|XP_002492444.1| hypothetical protein [Komagataella pastoris GS115]
gi|238032242|emb|CAY70249.1| hypothetical protein PAS_chr3_1167 [Komagataella pastoris GS115]
gi|328353543|emb|CCA39941.1| Ras-related protein Rab-1A [Komagataella pastoris CBS 7435]
Length = 203
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 96/123 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFAEDTYTQDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA+ V+++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVNQWLQEIDRYATGGVMKLLVGNKS 123
Query: 123 GLK 125
LK
Sbjct: 124 DLK 126
>gi|395835085|ref|XP_003790513.1| PREDICTED: nck-associated protein 1-like [Otolemur garnettii]
Length = 1133
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 105/161 (65%)
Query: 392 KKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAP 451
K+ + +K E KPGAES+RK R +T MDKLH+ LTEL +N+ + V+ T P
Sbjct: 645 KQRQTPRKGEPERDKPGAESHRKNRSIVTNMDKLHLNLTELALTMNHVYSFSVFGHTIFP 704
Query: 452 REYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRV 511
EYL HLE+R +RA+V + +N T EI +PSELLA ++AY++ +Q++ ++ D +RV
Sbjct: 705 SEYLSSHLEARLNRAIVWLAGYNATTQEIVRPSELLAGLKAYISFIQSLAQFLGADASRV 764
Query: 512 FNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
NALLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 765 IRNALLQQTQPLDSSGEQTITTLYTNWYLESLLRQASSGTI 805
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 108/183 (59%), Gaps = 13/183 (7%)
Query: 491 RAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV--AALYIQWYSEVLLRRVS 548
+ ++N+ + H+ VF + + ++ + SH E + A +++ Y+ +
Sbjct: 677 KLHLNLTELALTMNHVYSFSVFGHTIFP-SEYLSSHLEARLNRAIVWLAGYNAT-----T 730
Query: 549 ETQVKSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQ 603
+ V+ LL L+ Y ++ ++ D +RV NALLQQTQ +DS GE+T+ LY
Sbjct: 731 QEIVRPSELLAGLKAYISFIQSLAQFLGADASRVIRNALLQQTQPLDSSGEQTITTLYTN 790
Query: 604 WYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKL 663
WY E LLR+ S+G I S +AF+SL EG F+AEEFSD++E+RALA+L+GPYGMK
Sbjct: 791 WYLESLLRQASSGTIVLSPAMQAFISLPREGEQNFSAEEFSDISEMRALAELLGPYGMKF 850
Query: 664 LNE 666
L+E
Sbjct: 851 LSE 853
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+ES +K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCADPKSKPPFLLEKSMESSVKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKTEIIRFLTNYYQSFVDVMEFRDHVY 106
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 56/80 (70%), Gaps = 2/80 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACF 184
V E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + F
Sbjct: 958 VFELASAAGVGCDIDPALVAAIANLKADSSSPEEEYKVACLLLIFLAVSLPLLATDPSSF 1017
Query: 185 YLASLEGHSNNIHCMARNKI 204
Y +G++NNIHC+ + I
Sbjct: 1018 YSIEKDGYNNNIHCLTKAII 1037
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + +N AHEMVH D +F RLGQM+++Y+ P K
Sbjct: 129 RSYLDLIVTYTSVILLLSRIEDRRILIGMYNCAHEMVHGHGDSSFARLGQMVLEYDHPWK 188
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 189 KLTEEFGPH 197
>gi|126134463|ref|XP_001383756.1| GTP-binding protein of the rab family [Scheffersomyces stipitis CBS
6054]
gi|126095905|gb|ABN65727.1| GTP-binding protein of the rab family [Scheffersomyces stipitis CBS
6054]
Length = 208
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 100/133 (75%), Gaps = 3/133 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + P +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA+ V+++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 123 GL---KIVNEMAS 132
L KIV A+
Sbjct: 124 DLSDKKIVEYTAA 136
>gi|354544141|emb|CCE40864.1| hypothetical protein CPAR2_109020 [Candida parapsilosis]
Length = 206
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 100/133 (75%), Gaps = 3/133 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + P +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA+ V+++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 123 GL---KIVNEMAS 132
L KIV A+
Sbjct: 124 DLSDKKIVEYTAA 136
>gi|149244388|ref|XP_001526737.1| GTP-binding protein ypt1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146449131|gb|EDK43387.1| GTP-binding protein ypt1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 207
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 100/133 (75%), Gaps = 3/133 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + P +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA+ V+++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 123 GL---KIVNEMAS 132
L KIV A+
Sbjct: 124 DLADKKIVEYTAA 136
>gi|183941|gb|AAA35964.1| membrane-associated protein HEM-1 [Homo sapiens]
Length = 613
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 109/174 (62%), Gaps = 9/174 (5%)
Query: 379 RKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINY 438
+KTR++ Q + + +++ KPGAES+RK R +T MDKLH+ LTEL +N+
Sbjct: 128 KKTRKQRQTPRKGEPERD---------KPGAESHRKNRSIVTNMDKLHLNLTELALTMNH 178
Query: 439 CTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQ 498
+ V++ T P EYL HLE+R +RA+V + +N T EI +PSELLA V+AY+ +Q
Sbjct: 179 VYSFSVFEHTIFPSEYLSSHLEARLNRAIVWLAGYNATTQEIVRPSELLAGVKAYIGFIQ 238
Query: 499 TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
++ ++ D +RV LLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 239 SLAQFLGADASRVIRKPLLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTI 292
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 106/183 (57%), Gaps = 13/183 (7%)
Query: 491 RAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV--AALYIQWYSEVLLRRVS 548
+ ++N+ + H+ VF + + ++ + SH E + A +++ Y+ +
Sbjct: 164 KLHLNLTELALTMNHVYSFSVFEHTIFP-SEYLSSHLEARLNRAIVWLAGYNAT-----T 217
Query: 549 ETQVKSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQ 603
+ V+ LL ++ Y ++ ++ D +RV LLQQTQ +DS GE+T+ LY
Sbjct: 218 QEIVRPSELLAGVKAYIGFIQSLAQFLGADASRVIRKPLLQQTQPLDSCGEQTITTLYTN 277
Query: 604 WYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKL 663
WY E LLR+ S+G I S +AFVSL EG F+AEEFSD++E+RALA+L+GPYGMK
Sbjct: 278 WYLESLLRQASSGTIILSPAMQAFVSLPREGEQNFSAEEFSDISEMRALAELLGPYGMKF 337
Query: 664 LNE 666
L+E
Sbjct: 338 LSE 340
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + FY
Sbjct: 447 ELASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSLPLLATDPSSFYS 506
Query: 187 ASLEGHSNNIHCMARNKID 205
+G++NNIHC+ + I
Sbjct: 507 IEKDGYNNNIHCLTKAIIQ 525
>gi|91086487|ref|XP_970606.1| PREDICTED: similar to rab 19, 41 and [Tribolium castaneum]
gi|270009806|gb|EFA06254.1| hypothetical protein TcasGA2_TC009113 [Tribolium castaneum]
Length = 221
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 104/163 (63%), Gaps = 1/163 (0%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
+ FLFK+VL+G+ G GKTC+V+RF G F G TIGVDF +KTV ++ +++KLQIWDT
Sbjct: 18 FDFLFKIVLIGDCGTGKTCIVQRFKNGTFIERHGNTIGVDFSMKTVMVDGKKVKLQIWDT 77
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+ITQSYYRSA+ +I+VYDI+ + +F + W+ E+ Y+ VL LVG +
Sbjct: 78 AGQERFRTITQSYYRSANGVIIVYDITKRSSFLSVARWVEEVRRYSGSSVLLALVGNKAD 137
Query: 124 LKIVNEMA-SAAGLLCTVDPALATALASDKTDLDEDEHVLACL 165
++ + E+ A +C P + L + D E CL
Sbjct: 138 MESLREVEFEEAEAMCQYMPEVLFVLEASAKDNSNIEEAFLCL 180
>gi|341890273|gb|EGT46208.1| hypothetical protein CAEBREN_29374 [Caenorhabditis brenneri]
Length = 210
Score = 152 bits (383), Expect = 8e-34, Method: Composition-based stats.
Identities = 72/162 (44%), Positives = 108/162 (66%), Gaps = 1/162 (0%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ + +LFK+VLVG+ GVGKTC+V+RF G F QG TIGVDF +KT+ I+ +R+KLQIW
Sbjct: 5 DGFDYLFKIVLVGDMGVGKTCVVQRFRSGNFVDRQGTTIGVDFTMKTLNIDGKRVKLQIW 64
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DT GQERFR+ITQSYYRSA+ ++L YD++C+ +F L W+ ++ ++A+ V+++L+G
Sbjct: 65 DTGGQERFRTITQSYYRSANGIVLCYDMTCKQSFGSLQRWIDDVSKFAAPNVVKLLIGTK 124
Query: 122 SGLKIVNEM-ASAAGLLCTVDPALATALASDKTDLDEDEHVL 162
L+ + A A +L + S K D++ D L
Sbjct: 125 CDLEDQRAVEADEAEMLQRANGMFTMLETSAKNDINVDNAFL 166
>gi|399163159|gb|AFP33155.1| rab-19, partial [Caenorhabditis elegans]
Length = 209
Score = 152 bits (383), Expect = 8e-34, Method: Composition-based stats.
Identities = 72/162 (44%), Positives = 109/162 (67%), Gaps = 1/162 (0%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ + +LFK+VLVG+ GVGKTC+V+RF G F QG TIGVDF +KT+ ++ +R+KLQIW
Sbjct: 4 DGFDYLFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIW 63
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DT GQERFR+ITQSYYRSA+ ++L YDI+C+ +F L W+ ++ ++A+ V+++L+G
Sbjct: 64 DTGGQERFRTITQSYYRSANGIVLCYDITCKQSFGSLQRWIDDVSKFAAPNVVKLLIGTK 123
Query: 122 SGLKIVNEM-ASAAGLLCTVDPALATALASDKTDLDEDEHVL 162
L+ + A A +L + A S K +++ D L
Sbjct: 124 CDLEDQRAIEAEEAEMLQRANGMFAMLETSAKGNVNVDNAFL 165
>gi|17543864|ref|NP_502576.1| Protein RAB-19 [Caenorhabditis elegans]
gi|6425503|emb|CAB60605.1| Protein RAB-19 [Caenorhabditis elegans]
Length = 210
Score = 152 bits (383), Expect = 8e-34, Method: Composition-based stats.
Identities = 72/162 (44%), Positives = 109/162 (67%), Gaps = 1/162 (0%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ + +LFK+VLVG+ GVGKTC+V+RF G F QG TIGVDF +KT+ ++ +R+KLQIW
Sbjct: 5 DGFDYLFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIW 64
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DT GQERFR+ITQSYYRSA+ ++L YDI+C+ +F L W+ ++ ++A+ V+++L+G
Sbjct: 65 DTGGQERFRTITQSYYRSANGIVLCYDITCKQSFGSLQRWIDDVSKFAAPNVVKLLIGTK 124
Query: 122 SGLKIVNEM-ASAAGLLCTVDPALATALASDKTDLDEDEHVL 162
L+ + A A +L + A S K +++ D L
Sbjct: 125 CDLEDQRAIEAEEAEMLQRANGMFAMLETSAKGNVNVDNAFL 166
>gi|312065340|ref|XP_003135743.1| Ras family protein [Loa loa]
gi|307769102|gb|EFO28336.1| Ras family protein [Loa loa]
Length = 209
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 94/124 (75%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ + FLFK+VL+G+ GVGKTC+V+RF G F QG TIGVDF +KT+ I +R+KLQIW
Sbjct: 5 DSFDFLFKIVLIGDMGVGKTCVVQRFKNGTFIERQGTTIGVDFSMKTLIIEGKRVKLQIW 64
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DT GQERFR+ITQSYYRSA+ ++L YD++C+ +F+ L WL ++ ++A+ V +VL+
Sbjct: 65 DTGGQERFRTITQSYYRSANGILLCYDLTCRQSFESLHRWLDDVSKFAAPNVCKVLIATK 124
Query: 122 SGLK 125
+ L+
Sbjct: 125 ADLE 128
>gi|47222068|emb|CAG12094.1| unnamed protein product [Tetraodon nigroviridis]
Length = 251
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 92/124 (74%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ + FLFK++L+G++ VGKTC+V+ F G F Q TIGVDF ++TVEI +++K+Q+W
Sbjct: 10 DSFDFLFKIILIGDSNVGKTCVVQNFKSGTFSAKQQNTIGVDFSVRTVEIEGKKVKIQVW 69
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAH I+ YDI+ TFD ++ W++E+E Y + V+ VL+G
Sbjct: 70 DTAGQERFRTITQSYYRSAHGAIIAYDITRHATFDSVSHWIKEVELYGASNVVLVLIGNK 129
Query: 122 SGLK 125
L+
Sbjct: 130 CDLE 133
>gi|443723889|gb|ELU12108.1| hypothetical protein CAPTEDRAFT_157234 [Capitella teleta]
Length = 212
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 99/129 (76%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ + +LFK+VL+G+AGVGKTC+V+RF G F QG TIGVDF +KT+ ++ ++KLQ+W
Sbjct: 11 DQFDYLFKIVLIGDAGVGKTCVVQRFKTGTFLERQGNTIGVDFTMKTINLDGNKVKLQVW 70
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+A+I+ YDI+ +F+ WL ++++YA+ ++++L+G
Sbjct: 71 DTAGQERFRTITQSYYRSANAVIMAYDITKLQSFENCQRWLDDVKKYAAASIVKLLIGNK 130
Query: 122 SGLKIVNEM 130
+ L+ E+
Sbjct: 131 NDLETQREV 139
>gi|432942757|ref|XP_004083059.1| PREDICTED: ras-related protein Rab-19-like isoform 1 [Oryzias
latipes]
Length = 222
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 93/124 (75%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ + FLFK++L+G+ VGKTC+V+ F GVF Q TIGVDF ++T++I +++K+Q+W
Sbjct: 10 DSFDFLFKIILIGDTNVGKTCVVQNFKSGVFSEKQQNTIGVDFTVRTLDIEGKKVKMQVW 69
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAH ++ YDI+ + TFD ++ W+RE+E Y + V+ VL+G
Sbjct: 70 DTAGQERFRTITQSYYRSAHGAMIAYDITRRATFDSVSHWIREVELYGAANVVLVLIGNK 129
Query: 122 SGLK 125
L+
Sbjct: 130 CDLE 133
>gi|308491869|ref|XP_003108125.1| CRE-RAB-19 protein [Caenorhabditis remanei]
gi|308248973|gb|EFO92925.1| CRE-RAB-19 protein [Caenorhabditis remanei]
Length = 225
Score = 151 bits (382), Expect = 1e-33, Method: Composition-based stats.
Identities = 64/124 (51%), Positives = 95/124 (76%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ + +LFK+VLVG+ GVGKTC+V+RF G F QG TIGVDF +KT+ ++ +R+KLQIW
Sbjct: 5 DGFDYLFKIVLVGDMGVGKTCVVQRFRSGNFVDRQGTTIGVDFTMKTLNVDGKRVKLQIW 64
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DT GQERFR+ITQSYYRSA+ ++L YDI+C+ +F L W+ ++ ++A+ V+++L+G
Sbjct: 65 DTGGQERFRTITQSYYRSANGIVLCYDITCKQSFGSLQRWIDDVSKFAAPNVVKLLIGTK 124
Query: 122 SGLK 125
L+
Sbjct: 125 CDLE 128
>gi|33859608|ref|NP_035356.1| ras-related protein Rab-19 [Mus musculus]
gi|158518382|sp|P35294.3|RAB19_MOUSE RecName: Full=Ras-related protein Rab-19
gi|21411203|gb|AAH32936.1| RAB19, member RAS oncogene family [Mus musculus]
gi|112292995|dbj|BAF02875.1| Rab19 [Mus musculus]
gi|148681662|gb|EDL13609.1| RAB19, member RAS oncogene family [Mus musculus]
Length = 217
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 119/192 (61%), Gaps = 23/192 (11%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E+ +LFKV+L+G++ VGKTC+V+ F GV+ Q TIGVDF ++++EI+ +++K+Q+W
Sbjct: 12 ENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNK 131
Query: 122 SGL--------KIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVC 173
S L + +A GLL ++ + A + ++DE VFV +
Sbjct: 132 SDLWEKRHVLFEDACTLAEKHGLLAVLETS-----AKESRNIDE----------VFVLMA 176
Query: 174 IPKLARNEACFY 185
+ARN Y
Sbjct: 177 KELIARNSLHLY 188
>gi|88192430|pdb|2BCG|Y Chain Y, Structure Of Doubly Prenylated Ypt1:gdi Complex
Length = 206
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 95/123 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+GN+GVGK+CL+ RF+ + +TIGVDF IKTVE++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR +H +I+VYD++ Q +F+ + WL+EI+ YA+ VL++LVG
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKC 123
Query: 123 GLK 125
LK
Sbjct: 124 DLK 126
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 199 MARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
+ NK D +D R + +V ++FA + M +LETSA S NVE F+ +A ++ E ++++
Sbjct: 118 LVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQ 176
>gi|14318480|ref|NP_116615.1| Ypt1p [Saccharomyces cerevisiae S288c]
gi|1176710|sp|P01123.2|YPT1_YEAST RecName: Full=GTP-binding protein YPT1; AltName: Full=Protein YP2;
AltName: Full=Rab GTPase YPT1; AltName: Full=Transport
GTPase YPT1
gi|55670317|pdb|1UKV|Y Chain Y, Structure Of Rabgdp-Dissociation Inhibitor In Complex With
Prenylated Ypt1 Gtpase
gi|193885330|pdb|3CUE|F Chain F, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885336|pdb|3CUE|L Chain L, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885342|pdb|3CUE|R Chain R, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885348|pdb|3CUE|X Chain X, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|836716|dbj|BAA09201.1| GTP-binding protein YPT1 [Saccharomyces cerevisiae]
gi|45270824|gb|AAS56793.1| YFL038C [Saccharomyces cerevisiae]
gi|151940725|gb|EDN59112.1| GTP-binding protein [Saccharomyces cerevisiae YJM789]
gi|190406537|gb|EDV09804.1| GTP-binding protein YPT1 [Saccharomyces cerevisiae RM11-1a]
gi|207345743|gb|EDZ72464.1| YFL038Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256268891|gb|EEU04240.1| Ypt1p [Saccharomyces cerevisiae JAY291]
gi|259146151|emb|CAY79410.1| Ypt1p [Saccharomyces cerevisiae EC1118]
gi|285811857|tpg|DAA12402.1| TPA: Ypt1p [Saccharomyces cerevisiae S288c]
gi|323305139|gb|EGA58888.1| Ypt1p [Saccharomyces cerevisiae FostersB]
gi|323309292|gb|EGA62512.1| Ypt1p [Saccharomyces cerevisiae FostersO]
gi|323333703|gb|EGA75095.1| Ypt1p [Saccharomyces cerevisiae AWRI796]
gi|323348826|gb|EGA83065.1| Ypt1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355229|gb|EGA87055.1| Ypt1p [Saccharomyces cerevisiae VL3]
gi|349577879|dbj|GAA23046.1| K7_Ypt1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365760958|gb|EHN02639.1| Ypt1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|365765905|gb|EHN07409.1| Ypt1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299633|gb|EIW10726.1| Ypt1p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|401625946|gb|EJS43923.1| ypt1p [Saccharomyces arboricola H-6]
gi|401840682|gb|EJT43405.1| YPT1-like protein [Saccharomyces kudriavzevii IFO 1802]
gi|1589358|prf||2210408C GTP-binding protein
Length = 206
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 95/123 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+GN+GVGK+CL+ RF+ + +TIGVDF IKTVE++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR +H +I+VYD++ Q +F+ + WL+EI+ YA+ VL++LVG
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKC 123
Query: 123 GLK 125
LK
Sbjct: 124 DLK 126
Score = 39.3 bits (90), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 196 IHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
+ + NK D +D R + +V ++FA + M +LETSA S NVE F+ +A ++ E ++
Sbjct: 115 LKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMS 174
Query: 255 EK 256
++
Sbjct: 175 QQ 176
>gi|323337834|gb|EGA79075.1| Ypt1p [Saccharomyces cerevisiae Vin13]
Length = 219
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 111/163 (68%), Gaps = 14/163 (8%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+GN+GVGK+CL+ RF+ + +TIGVDF IKTVE++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR +H +I+VYD++ Q +F+ + WL+EI+ YA+ VL++LVG
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKC 123
Query: 123 GLK--------IVNEMASAAGLLCTVDPALATALASDKTDLDE 157
LK + E A A + P L T+ A D T++++
Sbjct: 124 DLKDKRVVEYDVAKEFADANKM-----PFLETS-ALDSTNVED 160
>gi|4293|emb|CAA25036.1| unnamed protein product [Saccharomyces cerevisiae]
gi|223830|prf||1001201A protein YP2
Length = 206
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 95/123 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+GN+GVGK+CL+ RF+ + +TIGVDF IKTVE++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR +H +I+VYD++ Q +F+ + WL+EI+ YA+ VL++LVG
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKC 123
Query: 123 GLK 125
LK
Sbjct: 124 DLK 126
>gi|2598565|emb|CAA56644.1| rab19 [Mus musculus]
Length = 217
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 119/192 (61%), Gaps = 23/192 (11%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E+ +LFKV+L+G++ VGKTC+V+ F GV+ Q TIGVDF ++++EI+ +++K+Q+W
Sbjct: 12 ENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNK 131
Query: 122 SGL--------KIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVC 173
S L + +A GLL ++ + A + ++DE VFV +
Sbjct: 132 SDLWEKRHVLFEDACTLAEKHGLLAVLETS-----AKESRNIDE----------VFVLMA 176
Query: 174 IPKLARNEACFY 185
+ARN Y
Sbjct: 177 KELIARNSLHLY 188
>gi|291413290|ref|XP_002722907.1| PREDICTED: RAB19, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 217
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 119/192 (61%), Gaps = 23/192 (11%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
ED+ +LFK++L+G++ VGKTC+V+ F GV+ + TIGVDF ++++E++ +R+K+Q+W
Sbjct: 12 EDFDYLFKIILIGDSNVGKTCVVQHFKSGVYTESRQNTIGVDFTVRSLEVDGKRVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRATFESVPHWIHEIEKYGAANLVIMLIGNK 131
Query: 122 SG--------LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVC 173
S + +A GLL ++ + A + ++DE VFV +
Sbjct: 132 SDRWEERHVLFEEACTLAEKHGLLAVLETS-----AKESRNIDE----------VFVLMA 176
Query: 174 IPKLARNEACFY 185
+ARN Y
Sbjct: 177 KELIARNSLHLY 188
>gi|45185452|ref|NP_983169.1| ABR220Wp [Ashbya gossypii ATCC 10895]
gi|44981141|gb|AAS50993.1| ABR220Wp [Ashbya gossypii ATCC 10895]
gi|374106372|gb|AEY95282.1| FABR220Wp [Ashbya gossypii FDAG1]
Length = 204
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 94/123 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF IKTVE++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +FD + WL+EI+ Y + V+++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFDNMKTWLQEIDRYGTAGVVKLLVGNKN 123
Query: 123 GLK 125
LK
Sbjct: 124 DLK 126
>gi|50292669|ref|XP_448767.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528079|emb|CAG61730.1| unnamed protein product [Candida glabrata]
Length = 206
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 110/163 (67%), Gaps = 14/163 (8%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+GN+GVGK+CL+ RF+ + +TIGVDF IKTVE++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR +H +I+VYD++ Q +F+ + WL+EI+ YA+ VL++LVG
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKC 123
Query: 123 GL--------KIVNEMASAAGLLCTVDPALATALASDKTDLDE 157
L + E A A + P L T+ A D T+++E
Sbjct: 124 DLADKRVVEYDVAKEFAEANKM-----PFLETS-ALDSTNVEE 160
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 196 IHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
+ + NK D D R + +V ++FA+ + M +LETSA S NVE+ F+ +A ++ E +
Sbjct: 115 LKLLVGNKCDLADKRVVEYDVAKEFAEANKMPFLETSALDSTNVEEAFLTMARQIKESMT 174
Query: 255 EK 256
++
Sbjct: 175 QQ 176
>gi|348526560|ref|XP_003450787.1| PREDICTED: ras-related protein Rab-19-like [Oreochromis niloticus]
Length = 224
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 108/162 (66%), Gaps = 13/162 (8%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
+ FLFK+VL+G++ VGKTC+++ F G+F Q TIGVDF ++T++I +++K+Q+WDT
Sbjct: 12 FDFLFKLVLIGDSNVGKTCVIQNFKSGIFSEKQQNTIGVDFTVRTLDIEGKKVKMQVWDT 71
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+ITQSYYRSAH ++ YDI+ + TFD + W++E+E Y + V+ VL+G
Sbjct: 72 AGQERFRTITQSYYRSAHGAVIAYDITRRSTFDSVKHWIKEVELYGAANVVLVLIGNKCD 131
Query: 124 LKIVNE--------MASAAGLLCTVDPALATALASDKTDLDE 157
L+ E +A G+L AL T+ A D ++DE
Sbjct: 132 LEQEREVPFQEACNLAKQKGILA----ALETS-AKDSQNVDE 168
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 189 LEGHSNNIHCMARNKIDRE-DREIPTEVGEDFAKRHD-MYYLETSAKASDNVEKLFMQIA 246
L G +N + + NK D E +RE+P + + AK+ + LETSAK S NV++ FM +A
Sbjct: 115 LYGAANVVLVLIGNKCDLEQEREVPFQEACNLAKQKGILAALETSAKDSQNVDEAFMLMA 174
Query: 247 AELMEK 252
EL+ +
Sbjct: 175 RELLSR 180
>gi|268552453|ref|XP_002634209.1| C. briggsae CBR-RAB-19 protein [Caenorhabditis briggsae]
Length = 209
Score = 150 bits (380), Expect = 2e-33, Method: Composition-based stats.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ + +LFK+VLVG+ GVGKTC+V+RF G F QG TIGVDF +KT+ ++ +R+KLQIW
Sbjct: 5 DGFDYLFKIVLVGDMGVGKTCVVQRFRSGNFVDRQGTTIGVDFTMKTLNVDGKRVKLQIW 64
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DT GQERFR+ITQSYYRSA+ ++L YDI+C+ +F L W+ ++ ++A+ V ++L+G
Sbjct: 65 DTGGQERFRTITQSYYRSANGIVLCYDITCKQSFGSLQRWIDDVSKFAAPNVAKLLIGTK 124
Query: 122 SGLKIVNEMAS-AAGLLCTVDPALATALASDKTDLDEDEHVL 162
L+ + + A LL + S K D++ D L
Sbjct: 125 CDLEDQRAIETEEAELLQRANGMFEMLETSAKNDINVDNAFL 166
>gi|346468105|gb|AEO33897.1| hypothetical protein [Amblyomma maculatum]
Length = 207
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 92/123 (74%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E+Y +LFK+VL+G+AGVGKTCLVRRF + F G T+GVDF IKT++++ + IKLQIW
Sbjct: 6 EEYDYLFKIVLIGDAGVGKTCLVRRFAEDTFTSGYKLTVGVDFKIKTIDLHGKTIKLQIW 65
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAG+ERF SIT +YR AH +I+VYD++ Q +F+ + W RE+E AS V ++LVG
Sbjct: 66 DTAGEERFYSITSCFYRGAHGIIVVYDVTNQESFENVKRWFREVERNASEHVSKLLVGSK 125
Query: 122 SGL 124
+ L
Sbjct: 126 NDL 128
>gi|357440491|ref|XP_003590523.1| Ras-like protein [Medicago truncatula]
gi|355479571|gb|AES60774.1| Ras-like protein [Medicago truncatula]
Length = 234
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 137/254 (53%), Gaps = 64/254 (25%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVG--- 127
Query: 123 GLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEA 182
+K D+DE + V CL
Sbjct: 128 ----------------------------NKADMDESKRV--CLTH--------------- 142
Query: 183 CFYLASLEGHSNNIHCMARNKIDREDREIPTE-VGEDFAKRHDMYYLETSAKASDNVEKL 241
SL H + C + I + G+ A + + + ETSAK + NV+++
Sbjct: 143 -----SLFVHPFHFPCTS----------ISCDYYGQALADEYGIKFFETSAKTNMNVDEV 187
Query: 242 FMQIAAELMEKLAE 255
F IA ++ ++LAE
Sbjct: 188 FFSIARDIKQRLAE 201
>gi|312380644|gb|EFR26581.1| hypothetical protein AND_07236 [Anopheles darlingi]
Length = 199
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 102/154 (66%), Gaps = 1/154 (0%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E + FLFK+VL+G+ G GKTC+V+RF G F G TIGVDF +K V ++++++KLQIW
Sbjct: 18 ESFDFLFKIVLIGDCGTGKTCIVQRFKSGNFIESHGNTIGVDFSMKAVTVDDKKVKLQIW 77
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ +I+VYDI+ + +F L W+ E+ Y + V+ ++G
Sbjct: 78 DTAGQERFRTITQSYYRSANGVIIVYDITKRSSFISLQRWIDEVRRYTASNVMIFVIGNK 137
Query: 122 SGLKIVNEMA-SAAGLLCTVDPALATALASDKTD 154
S L + E+ S A +C P + + + D
Sbjct: 138 SDLDSIREVEFSEAQAMCQYIPEVMFVMETSAKD 171
>gi|348519351|ref|XP_003447194.1| PREDICTED: ras-related protein Rab-19-like [Oreochromis niloticus]
Length = 220
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 120/204 (58%), Gaps = 31/204 (15%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ + FLFK++LVG++ VGKTC+V+ F G+F Q TIGVDF ++T++I+ +++K+Q+W
Sbjct: 10 DSFDFLFKIILVGDSDVGKTCVVQSFKSGIFIEKQQNTIGVDFTVRTLDIDGKKVKMQVW 69
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAH ++ YDI+ + TF+ + W+RE+E Y + V+ +L+G
Sbjct: 70 DTAGQERFRTITQSYYRSAHGAMVAYDITRRSTFESVPHWIREVELYGAASVVLILIGNK 129
Query: 122 SGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARN- 180
S L A L D +L E+ VLA L K A+N
Sbjct: 130 SDLH-----------------AKRQVLFEDACNLAENSGVLAALETS------AKEAQNI 166
Query: 181 EACFYLASLEGHSNNIHCMARNKI 204
EA F L + E MARN +
Sbjct: 167 EAAFILMARE-------LMARNGM 183
>gi|432863260|ref|XP_004070049.1| PREDICTED: ras-related protein Rab-8B-like [Oryzias latipes]
Length = 239
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 120/180 (66%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ +R+KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDSFNTTFISTIGIDFKIRTIELDGKRVKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDICNEKSFDNIKNWIRNIEEHASSDVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEAC 183
+ +++ G +D + S K+ L+ +E + + ++++ C+ L+++ C
Sbjct: 125 MTDRRQVSKDRGEKLAIDYRVKFLETSAKSSLNVEESFVHLMEILWLRWCLKLLSQSSDC 184
>gi|410077807|ref|XP_003956485.1| hypothetical protein KAFR_0C03580 [Kazachstania africana CBS 2517]
gi|372463069|emb|CCF57350.1| hypothetical protein KAFR_0C03580 [Kazachstania africana CBS 2517]
Length = 212
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 93/117 (79%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+GN+GVGK+CL+ RF+ + +TIGVDF IKT+E++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTIELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR +H +I+VYD++ Q +F+ + WL+EI+ YA+ VL++LVG
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSAVLKLLVG 120
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 196 IHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
+ + NK D + R + +V ++FA+ ++M +LETSA S NVE+ F+ +A ++ E A
Sbjct: 115 LKLLVGNKCDLDGKRMVEYDVAKEFAESNNMPFLETSALDSTNVEEAFLTMARQIKESFA 174
Query: 255 EK 256
++
Sbjct: 175 QQ 176
>gi|73535739|pdb|1YZN|A Chain A, Gppnhp-Bound Ypt1p Gtpase
Length = 185
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 95/123 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+GN+GVGK+CL+ RF+ + +TIGVDF IKTVE++ + +KLQIWD
Sbjct: 17 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 76
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR +H +I+VYD++ Q +F+ + WL+EI+ YA+ VL++LVG
Sbjct: 77 TAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKC 136
Query: 123 GLK 125
LK
Sbjct: 137 DLK 139
>gi|126277017|ref|XP_001366139.1| PREDICTED: ras-related protein Rab-8B-like [Monodelphis domestica]
Length = 207
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 109/156 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G S
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKSD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ ++ +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSINVEE 160
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D D R++ E GE A + + +LETS
Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKSDMNDKRQVSKERGEKLAIDYGIKFLETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGVGMLTRI 271
AK+S NVE+ F +A ++M KL K+ + G G +I
Sbjct: 152 AKSSINVEEAFFTLARDIMTKLNRKMNDSNSPGAGGPVKI 191
>gi|66730270|ref|NP_001019497.1| ras-related protein Rab-19 [Rattus norvegicus]
gi|81889125|sp|Q5M7U5.1|RAB19_RAT RecName: Full=Ras-related protein Rab-19
gi|56789734|gb|AAH88443.1| RAB19, member RAS oncogene family [Rattus norvegicus]
gi|149065308|gb|EDM15384.1| similar to RAB19, member RAS oncogene family [Rattus norvegicus]
Length = 217
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 121/192 (63%), Gaps = 23/192 (11%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E+ +LFKV+L+G++ VGKTC+V+ F GV+ Q TIGVDF ++++EI+ +++K+Q+W
Sbjct: 12 ENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNK 131
Query: 122 SGL----KIVNE----MASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVC 173
S L ++ E +A GLL ++ + A + ++DE VFV +
Sbjct: 132 SDLWEKRHVLFEDACTLAEKYGLLAVLETS-----AKESRNIDE----------VFVLMA 176
Query: 174 IPKLARNEACFY 185
+ARN Y
Sbjct: 177 KELIARNSLHLY 188
>gi|390343455|ref|XP_794320.3| PREDICTED: ras-related protein Rab-43-like [Strongylocentrotus
purpuratus]
Length = 220
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 109/159 (68%), Gaps = 3/159 (1%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E + +LFK+VL+G+AGVGKTC+V+RF G F Q +TIGVDF +KT+ I+ +++KLQ+W
Sbjct: 21 ETFDYLFKIVLIGDAGVGKTCVVQRFKSGTFLEKQHSTIGVDFTMKTLNIDGKKVKLQVW 80
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ +I+ YDI+ + TF + W+ ++++YA V+ +L+G
Sbjct: 81 DTAGQERFRTITQSYYRSANGVIIAYDITKKETFCNVPRWIEDVQKYAGGSVICILLGNK 140
Query: 122 SGLKIVNEMASAAGLLCTVDPALATAL---ASDKTDLDE 157
L+ + E+ + A+ + A D T++DE
Sbjct: 141 KDLEQIREVDYEDAQALSSHHAMLECIEVSAKDSTNIDE 179
>gi|348580595|ref|XP_003476064.1| PREDICTED: LOW QUALITY PROTEIN: nck-associated protein 1-like
[Cavia porcellus]
Length = 1097
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/147 (48%), Positives = 97/147 (65%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPGAES+RK R +T MDKLH L EL +N+ V++ T P EYL HLE+R +R
Sbjct: 623 KPGAESHRKNRSLVTNMDKLHQHLMELALTMNHVHTFSVFEHTIFPSEYLSSHLEARLNR 682
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
A+V + +N T EI +PSELLA V+AY+ +Q++ ++ D++RV NALLQQTQ +DS
Sbjct: 683 AIVCLAGYNTTTQEILRPSELLAGVKAYIGFIQSLAQFLGADVSRVIRNALLQQTQPLDS 742
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
GE+T+ LY WY E LLR+ S +
Sbjct: 743 FGEQTITTLYTNWYLESLLRQASSGTI 769
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 76/104 (73%)
Query: 563 VYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSL 622
+ ++ ++ D++RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S+G I S
Sbjct: 714 IQSLAQFLGADVSRVIRNALLQQTQPLDSFGEQTITTLYTNWYLESLLRQASSGTIVLSP 773
Query: 623 NQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+AF+SL EG F+AEEFSD++E+RALA+L+GPYGMK L+E
Sbjct: 774 AMQAFISLPREGEQNFSAEEFSDISEMRALAELLGPYGMKFLSE 817
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 56/80 (70%), Gaps = 2/80 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + F
Sbjct: 922 VFELASAAGVDCDIDPALVAAIANLKADNSSPEEEYKVACLLLIFLAVSLPLLATDPSSF 981
Query: 185 YLASLEGHSNNIHCMARNKI 204
Y +G++NNIHC+ + I
Sbjct: 982 YSIEKDGYNNNIHCLTKAII 1001
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM+H D +F RLGQM+++Y+ P+KKL+EEF PH
Sbjct: 121 YNCAHEMLHGHGDPSFARLGQMVLEYDHPLKKLTEEFGPH 160
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 33/102 (32%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI+++RG G+L R+YNIKK
Sbjct: 1 MSLTSAYQHKLAEKLTILNNRGQGVLIRMYNIKK-------------------------- 34
Query: 303 KFPNIDIKSVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
+ + + + +S+IV+ L+ YY +FVD++ F+D VY
Sbjct: 35 -------QHLGPVHREKSEIVRFLTSYYQSFVDVMEFRDHVY 69
>gi|390339817|ref|XP_003725091.1| PREDICTED: ras-related protein RABE1a isoform 1 [Strongylocentrotus
purpuratus]
gi|390339819|ref|XP_785818.3| PREDICTED: ras-related protein RABE1a isoform 2 [Strongylocentrotus
purpuratus]
Length = 218
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 121/245 (49%), Gaps = 80/245 (32%)
Query: 8 FKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAGQE 67
+K++L+G +GVGKTCL+RR+ +G FP AT+G+DF I+T+ ++ + I+LQ+WDT+GQE
Sbjct: 18 YKILLIGGSGVGKTCLLRRYVEGEFPLNSKATLGLDFKIRTLIVDTDEIRLQLWDTSGQE 77
Query: 68 RFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSGLKIV 127
RFRS+TQ+YYR A +++VYD++ + +F LTDWL ++ YA V VL+G
Sbjct: 78 RFRSMTQAYYRGAAGIVIVYDVTAEDSFTTLTDWLGDVSMYAPEGVKMVLIG-------- 129
Query: 128 NEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEACFYLA 187
+K+D DEDE V
Sbjct: 130 -----------------------NKSDADEDERV-------------------------- 140
Query: 188 SLEGHSNNIHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAA 247
I + GE+FAK H + Y ETSA + NV + F +A
Sbjct: 141 -----------------------ISQQAGEEFAKEHGLKYFETSAVTNQNVAEAFEHLAK 177
Query: 248 ELMEK 252
L+EK
Sbjct: 178 LLLEK 182
>gi|410918967|ref|XP_003972956.1| PREDICTED: ras-related protein Rab-19-like [Takifugu rubripes]
Length = 224
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 90/124 (72%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ + FLFK++L+G++ VGKTC+V+ F G F Q TIGVDF ++TVEI +++K+Q+W
Sbjct: 10 DSFDFLFKIILIGDSNVGKTCVVQNFKSGTFSEKQQNTIGVDFSVRTVEIEGKKVKIQVW 69
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAH ++ YDI+ TFD ++ W+ E+E Y + V VL+G
Sbjct: 70 DTAGQERFRTITQSYYRSAHGAVIAYDITRHATFDSVSHWISEVELYGASNVTLVLIGNK 129
Query: 122 SGLK 125
L+
Sbjct: 130 CDLE 133
>gi|170027760|ref|XP_001841765.1| rab 19 [Culex quinquefasciatus]
gi|167862335|gb|EDS25718.1| rab 19 [Culex quinquefasciatus]
Length = 219
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 101/154 (65%), Gaps = 1/154 (0%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E + FLFK+VL+G+ G GKTC+V+RF G F G TIGVDF +K V ++ +++KLQIW
Sbjct: 16 ESFDFLFKIVLIGDCGTGKTCIVQRFKSGNFIESHGNTIGVDFSMKAVTVDGKKVKLQIW 75
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ +I+VYDI+ + +F L W+ E+ Y + V+ +VG
Sbjct: 76 DTAGQERFRTITQSYYRSANGVIIVYDITKRSSFLNLQRWIDEVRRYTATNVMIFVVGNK 135
Query: 122 SGLKIVNEMASA-AGLLCTVDPALATALASDKTD 154
S L + E+ A A +C P + + + D
Sbjct: 136 SDLDAIREVEFAEAQTMCQYIPEIMFVMETSAKD 169
>gi|115496115|ref|NP_001069785.1| ras-related protein Rab-8B [Bos taurus]
gi|116255981|sp|Q2HJI8.1|RAB8B_BOVIN RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|88682949|gb|AAI05331.1| RAB8B, member RAS oncogene family [Bos taurus]
Length = 207
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 109/156 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + AS K+ ++ +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLEASAKSSMNVEE 160
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D D R++ E GE A + + +LE S
Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLEAS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGVGMLTRI 271
AK+S NVE+ F +A ++M KL K+ + G G +I
Sbjct: 152 AKSSMNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGPVKI 191
>gi|254583504|ref|XP_002497320.1| ZYRO0F02816p [Zygosaccharomyces rouxii]
gi|238940213|emb|CAR28387.1| ZYRO0F02816p [Zygosaccharomyces rouxii]
Length = 209
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 95/123 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+GN+GVGK+CL+ RF+ + +TIGVDF IKTV+++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVDLDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR +H +I+VYD++ Q +F+ + WL+EI+ YA+ VL++LVG
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKC 123
Query: 123 GLK 125
LK
Sbjct: 124 DLK 126
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 199 MARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
+ NK D +D R + +V ++FA + M ++ETSA S NVE+ F+ +A ++ + +A++
Sbjct: 118 LVGNKCDLKDKRVVEYDVAKEFADANKMPFIETSALDSTNVEEAFLTMARQIKDSMAQQQ 177
Query: 258 TIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESC 296
HD G N + G+ K L++ S C
Sbjct: 178 --RHDGGAA------NGQNENGNVNLKGQSLTNSSANGC 208
>gi|296211900|ref|XP_002752605.1| PREDICTED: nck-associated protein 1-like isoform 1 [Callithrix
jacchus]
Length = 1134
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 103/161 (63%)
Query: 392 KKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAP 451
K+ + +K E KPGAES+RK R +T MDKLH+ LTEL +N+ + V T P
Sbjct: 646 KQRQTPRKGEPERDKPGAESHRKNRSIVTNMDKLHLHLTELALTMNHVFSFSVSGHTVFP 705
Query: 452 REYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRV 511
EYL HLE+R +RA+V + +N T EI +PSELLA V+AY+ +Q++ ++ D +RV
Sbjct: 706 SEYLSSHLEARLNRAIVWLAGYNATTQEILRPSELLAGVKAYIGFIQSLAQFLGADASRV 765
Query: 512 FNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
NALLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 766 IRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTI 806
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+ES +K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMESSVKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 106
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + FY
Sbjct: 961 ELASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSLPLLATDPSSFYS 1020
Query: 187 ASLEGHSNNIHCMARNKI 204
+G++NNIHC+ + I
Sbjct: 1021 IEKDGYNNNIHCLTKAII 1038
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + +N AHEM+H D +F RLGQM+++Y+ P++
Sbjct: 129 RSYLDLIVTYTSVILLLSRIEDRRILIGMYNCAHEMLHGHGDPSFARLGQMVLEYDHPLR 188
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 189 KLTEEFGPH 197
>gi|367011297|ref|XP_003680149.1| hypothetical protein TDEL_0C00490 [Torulaspora delbrueckii]
gi|359747808|emb|CCE90938.1| hypothetical protein TDEL_0C00490 [Torulaspora delbrueckii]
Length = 208
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 93/117 (79%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+GN+GVGK+CL+ RF+ + +TIGVDF IKTVE++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR +H +I+VYD++ Q +F+ + WL+EI+ YA+ VL++LVG
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVG 120
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 199 MARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
+ NK D ED R + +V +FA+ + M +LETSA S NVE+ F+ +A ++ + +A++
Sbjct: 118 LVGNKCDLEDKRVVEYDVAREFAEANKMPFLETSALDSTNVEQAFLTMAKQIKDSMAQQ- 176
Query: 258 TIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESC 296
H R G N K G+ K L++ + C
Sbjct: 177 ---HARDGGS-----NAKDDQGNVNLKGQSLTNNAGNGC 207
>gi|444728384|gb|ELW68842.1| Ras-related protein Rab-19 [Tupaia chinensis]
Length = 217
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 118/192 (61%), Gaps = 23/192 (11%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK++L+G++ VGKTC+V+ F GV+ Q TIGVDF ++++EI+ +R+K+Q+W
Sbjct: 12 ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLEISGKRVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRHSTFESVPHWIHEIEKYGAANLVIMLIGNK 131
Query: 122 SGL--------KIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVC 173
L + +A GLL V+ + A + ++DE VFV +
Sbjct: 132 CDLWEKRHVLFEDACTLAEKHGLLAVVETS-----AKESRNIDE----------VFVLMA 176
Query: 174 IPKLARNEACFY 185
+ARN Y
Sbjct: 177 KELIARNSLHLY 188
>gi|125980342|ref|XP_001354195.1| GA20071 [Drosophila pseudoobscura pseudoobscura]
gi|195167530|ref|XP_002024586.1| GL22545 [Drosophila persimilis]
gi|54642500|gb|EAL31247.1| GA20071 [Drosophila pseudoobscura pseudoobscura]
gi|194107991|gb|EDW30034.1| GL22545 [Drosophila persimilis]
Length = 219
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 104/165 (63%), Gaps = 1/165 (0%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ FLFK+VL+G+ G GKTC+V RF G + G TIGVDF +KT+E+ ++IKLQIW
Sbjct: 16 ENFDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIEVEAKQIKLQIW 75
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ +++VYDI+ + +F L W+ E+ Y + VL +L+G
Sbjct: 76 DTAGQERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILIGNK 135
Query: 122 SGLKIVNEMA-SAAGLLCTVDPALATALASDKTDLDEDEHVLACL 165
L+ E+ A +C P + + + + E CL
Sbjct: 136 CDLETEREVDFEEARQMCQYIPEILFVMETSAKENMNVEDAFRCL 180
>gi|296211902|ref|XP_002752606.1| PREDICTED: nck-associated protein 1-like isoform 2 [Callithrix
jacchus]
Length = 1084
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 103/161 (63%)
Query: 392 KKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAP 451
K+ + +K E KPGAES+RK R +T MDKLH+ LTEL +N+ + V T P
Sbjct: 596 KQRQTPRKGEPERDKPGAESHRKNRSIVTNMDKLHLHLTELALTMNHVFSFSVSGHTVFP 655
Query: 452 REYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRV 511
EYL HLE+R +RA+V + +N T EI +PSELLA V+AY+ +Q++ ++ D +RV
Sbjct: 656 SEYLSSHLEARLNRAIVWLAGYNATTQEILRPSELLAGVKAYIGFIQSLAQFLGADASRV 715
Query: 512 FNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
NALLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 716 IRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTI 756
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + FY
Sbjct: 911 ELASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSLPLLATDPSSFYS 970
Query: 187 ASLEGHSNNIHCMARNKI 204
+G++NNIHC+ + I
Sbjct: 971 IEKDGYNNNIHCLTKAII 988
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + +N AHEM+H D +F RLGQM+++Y+ P++
Sbjct: 79 RSYLDLIVTYTSVILLLSRIEDRRILIGMYNCAHEMLHGHGDPSFARLGQMVLEYDHPLR 138
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 139 KLTEEFGPH 147
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 40/56 (71%), Gaps = 4/56 (7%)
Query: 293 LESCIKQIVKKFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
+ES +K I KKFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 1 MESSVKYINKKFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 56
>gi|464524|sp|Q05974.1|RAB1A_LYMST RecName: Full=Ras-related protein Rab-1A
gi|288934|emb|CAA51233.1| RAB1 [Lymnaea stagnalis]
Length = 205
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 93/122 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG S
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKS 126
Query: 123 GL 124
L
Sbjct: 127 DL 128
>gi|344297148|ref|XP_003420261.1| PREDICTED: ras-related protein Rab-19-like [Loxodonta africana]
Length = 217
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 96/123 (78%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK++L+G++ VGKTC+V+ F GV+ Q TIGVDF ++++EIN +++K+Q+W
Sbjct: 12 ENFDYLFKIILIGDSNVGKTCVVQHFMSGVYTETQQNTIGVDFTVRSLEINGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ E+E+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEVEKYGAANLVVMLIGNK 131
Query: 122 SGL 124
+ L
Sbjct: 132 ADL 134
>gi|332207671|ref|XP_003252918.1| PREDICTED: nck-associated protein 1-like [Nomascus leucogenys]
Length = 1130
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 103/161 (63%)
Query: 392 KKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAP 451
K+ + +K E KPGAES+RK R +T MDKLH LTEL +N+ + V++ P
Sbjct: 646 KQRQTPRKGEPERDKPGAESHRKNRSIVTNMDKLHQNLTELAVTMNHVYSFSVFEHAIFP 705
Query: 452 REYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRV 511
EYL HLE+R +RA+V + +N T EI +PSELLA V+AY+ +Q++ ++ D +RV
Sbjct: 706 SEYLSSHLEARLNRAIVWLAGYNATTQEIVRPSELLAGVKAYIGFIQSLAQFLGADASRV 765
Query: 512 FNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
NALLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 766 IRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTI 806
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 109/183 (59%), Gaps = 13/183 (7%)
Query: 491 RAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV--AALYIQWYSEVLLRRVS 548
+ + N+ + H+ VF +A+ ++ + SH E + A +++ Y+ +
Sbjct: 678 KLHQNLTELAVTMNHVYSFSVFEHAIFP-SEYLSSHLEARLNRAIVWLAGYNAT-----T 731
Query: 549 ETQVKSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQ 603
+ V+ LL ++ Y ++ ++ D +RV NALLQQTQ +DS GE+T+ LY
Sbjct: 732 QEIVRPSELLAGVKAYIGFIQSLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTN 791
Query: 604 WYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKL 663
WY E LLR+ S+G I FS +AFVSL EG F+AEEFSD++E+RALA+L+GPYGMK
Sbjct: 792 WYLESLLRQASSGTIIFSPAMQAFVSLPREGERNFSAEEFSDISEMRALAELLGPYGMKF 851
Query: 664 LNE 666
L+E
Sbjct: 852 LSE 854
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 75/106 (70%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+E +K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMEPSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFP ID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPIIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 106
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + FY
Sbjct: 961 ELASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSLPLLAPDPSSFYS 1020
Query: 187 ASLEGHSNNIHCMARNKI 204
+G++NNIHC+ + I
Sbjct: 1021 IEKDGYNNNIHCLTKAII 1038
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + +N AHEM+H D +F RLGQM+++Y+ P+K
Sbjct: 129 RSYLDLIVTYTSVILLLSRIEDRRILIGMYNCAHEMLHGHGDPSFARLGQMVLEYDHPLK 188
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 189 KLTEEFGPH 197
>gi|113679535|ref|NP_001038812.1| ras-related protein Rab-43 [Danio rerio]
gi|112419206|gb|AAI22422.1| Zgc:153788 [Danio rerio]
gi|182890198|gb|AAI65016.1| Zgc:153788 protein [Danio rerio]
Length = 208
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 91/118 (77%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ Y +FK+VLVG+ GVGKTC+V+RF G+F QG TIGVDF +KT+EI+ +R+KLQIW
Sbjct: 8 DSYDLVFKIVLVGDVGVGKTCVVQRFKTGIFIEKQGNTIGVDFTMKTLEIHGKRVKLQIW 67
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQERFR+ITQSYYRSA+ I+ YDI+ + TF + W+ ++++Y ++ +L+G
Sbjct: 68 DTAGQERFRTITQSYYRSANGAIITYDITKKATFLSVPKWMEDVKKYGGSNIVPLLIG 125
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 191 GHSNNIHCMARNKID-REDREIPTEVGEDFAKRHD-MYYLETSAKASDNVEKLFMQIAAE 248
G SN + + NK D E RE+P E + A + D + +ETSAK S NV++ F ++A+E
Sbjct: 115 GGSNIVPLLIGNKCDLSESREVPLEDAQTMAHQLDFVSAIETSAKDSSNVDEAFNKMASE 174
Query: 249 LM 250
L+
Sbjct: 175 LI 176
>gi|366991921|ref|XP_003675726.1| hypothetical protein NCAS_0C03710 [Naumovozyma castellii CBS 4309]
gi|342301591|emb|CCC69361.1| hypothetical protein NCAS_0C03710 [Naumovozyma castellii CBS 4309]
Length = 211
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 93/117 (79%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+GN+GVGK+CL+ RF+ + +TIGVDF IKTVE++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR +H +I+VYD++ Q +F+ + WL+EI+ YA+ VL++LVG
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQDSFNGVKMWLQEIDRYATSTVLKLLVG 120
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 196 IHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
+ + NK D D R + +V ++FA + M +LETSA S NVE+ F+ +A ++ E ++
Sbjct: 115 LKLLVGNKCDLTDKRVVEYDVAKEFADANKMPFLETSALNSTNVEEAFLTMARQIKESMS 174
Query: 255 EKLTIMHDRG 264
++ M D G
Sbjct: 175 QQK--MEDGG 182
>gi|156847653|ref|XP_001646710.1| hypothetical protein Kpol_1023p21 [Vanderwaltozyma polyspora DSM
70294]
gi|156117390|gb|EDO18852.1| hypothetical protein Kpol_1023p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 207
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 110/163 (67%), Gaps = 14/163 (8%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+GN+GVGK+CL+ RF+ + +TIGVDF IKTV+++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVQLDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR +H +I+VYDI+ Q +F+ + WL+EI+ YA+ VL++LVG
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDITDQESFNGVKMWLQEIDRYATSTVLKLLVGNKC 123
Query: 123 GLK--------IVNEMASAAGLLCTVDPALATALASDKTDLDE 157
L + E A A + P L T+ A D T+++E
Sbjct: 124 DLNDKRVVEYDVAKEFAEANKM-----PFLETS-ALDSTNVEE 160
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 196 IHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
+ + NK D D R + +V ++FA+ + M +LETSA S NVE+ F+ +A ++ E ++
Sbjct: 115 LKLLVGNKCDLNDKRVVEYDVAKEFAEANKMPFLETSALDSTNVEEAFLTMARQIKESIS 174
Query: 255 EKLTI 259
++ I
Sbjct: 175 QQQQI 179
>gi|71897019|ref|NP_001026510.1| nck-associated protein 1-like [Gallus gallus]
gi|60098803|emb|CAH65232.1| hypothetical protein RCJMB04_10e18 [Gallus gallus]
Length = 1130
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 107/177 (60%), Gaps = 6/177 (3%)
Query: 372 KPGAESYRKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTE 431
K A + K R + + KK + + KPGAES RK R T MDKLH+ L E
Sbjct: 630 KHCASTVSKARNKKTLKHPSKKGEPERG------KPGAESQRKDRSVTTNMDKLHLTLAE 683
Query: 432 LCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVR 491
L ++N+ N V++ T P EYL HLE+RF++A+V M ++P T E+A+PSE+L +
Sbjct: 684 LSLSLNHVPNFTVFEHTVTPAEYLSSHLEARFTKAIVAMACYSPATQEVARPSEVLVGLG 743
Query: 492 AYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVS 548
AY+ +Q++ ++V +D R+ + LLQQTQ D+ GE+T+ +Y WY E LLR+ S
Sbjct: 744 AYITFIQSLTHFVGLDTARIIRSVLLQQTQPRDASGEQTLTTIYTNWYLEALLRQAS 800
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + K AEKLTI+++RG G+L RIYNIKK C D K++PSFL DK++E IK I K
Sbjct: 1 MSLPSVYQNKFAEKLTILNERGRGVLVRIYNIKKTCSDPKTRPSFLCDKAMEPSIKFINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPN+D++S + + + + DIV++L+ YYY+FVD+L F+D VY
Sbjct: 61 KFPNLDVRSSTQHLGPVHKDKGDIVRALAPYYYSFVDVLEFRDHVY 106
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 102/186 (54%), Gaps = 10/186 (5%)
Query: 489 SVRAYMNVLQTVENYVHIDMTRVFNNALLQQT----QRMDSHGEK--TVAALYIQWYSEV 542
SV M+ L + + + V N + + T + + SH E T A + + YS
Sbjct: 669 SVTTNMDKLHLTLAELSLSLNHVPNFTVFEHTVTPAEYLSSHLEARFTKAIVAMACYSPA 728
Query: 543 L--LRRVSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAAL 600
+ R SE V + F++ T ++V +D R+ + LLQQTQ D+ GE+T+ +
Sbjct: 729 TQEVARPSEVLVGLGAYITFIQSLT--HFVGLDTARIIRSVLLQQTQPRDASGEQTLTTI 786
Query: 601 YIQWYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYG 660
Y WY E LLR+ S G I + +AF ++ EG F+A EFSDV+E+RALA+LIGPYG
Sbjct: 787 YTNWYLEALLRQASTGAIVLAPALQAFTTVPREGEPSFSAAEFSDVSEMRALAELIGPYG 846
Query: 661 MKLLNE 666
MK L++
Sbjct: 847 MKFLSD 852
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL + LA K D E+++ +ACLL+VFVAV +P LA + A Y
Sbjct: 959 ELASAAGIPCEIDPALVSVLAGSKMDGSSSEEDYKVACLLLVFVAVSLPMLASDPASIYN 1018
Query: 187 ASLEGHSNNIHCMARNKI 204
++G++NNIHC+A+ I
Sbjct: 1019 TEMDGYNNNIHCLAKAII 1036
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
++ AHEM H SD +F RLGQM+++Y+ P+KKL+EEF PH
Sbjct: 158 YHCAHEMSHGASDSSFARLGQMVLEYDHPLKKLTEEFGPH 197
>gi|429329505|gb|AFZ81264.1| Ras related Rab1a small GTP-binding protein [Babesia equi]
Length = 200
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 94/124 (75%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+DY +LFK+VLVG++GVGK+CL+ RF F TIGVDF +T+++N++R+KLQIW
Sbjct: 7 KDYDYLFKLVLVGDSGVGKSCLLLRFADDSFTDSYITTIGVDFRFRTIKVNDKRVKLQIW 66
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+IT +YYR A ++L YD++ + +FD ++DWL E+++YA+ ++LVG
Sbjct: 67 DTAGQERFRTITSTYYRGADGIVLAYDLTDKSSFDHISDWLAEVDKYAAEDTCKLLVGNK 126
Query: 122 SGLK 125
S ++
Sbjct: 127 SDIQ 130
>gi|255730689|ref|XP_002550269.1| GTP-binding protein ypt1 [Candida tropicalis MYA-3404]
gi|240132226|gb|EER31784.1| GTP-binding protein ypt1 [Candida tropicalis MYA-3404]
Length = 207
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 106/151 (70%), Gaps = 3/151 (1%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+ L+ RF + P +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSSLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA+ V+++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 123 GL--KIVNEMASAAGLLCTVD-PALATALAS 150
L K V E +A +D P L T+ S
Sbjct: 124 DLSDKKVVEYTAAKEFADALDIPFLETSALS 154
>gi|123708078|ref|NP_001074105.1| multiple EGF-like-domains 8 [Danio rerio]
gi|120537782|gb|AAI29422.1| Zgc:158741 [Danio rerio]
gi|182891058|gb|AAI64972.1| Zgc:158741 protein [Danio rerio]
Length = 184
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 108/156 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E+N ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELNGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +F+ + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITSEKSFENIKNWIRNIEEHASSDVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S KT ++ +E
Sbjct: 125 MNERRQVSKERGEKLAIDYGIKFLETSAKTSINVEE 160
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 185 YLASLEGH-SNNIHCMA-RNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
++ ++E H S+++ M NK D E R++ E GE A + + +LETSAK S NVE+
Sbjct: 102 WIRNIEEHASSDVEKMILGNKCDMNERRQVSKERGEKLAIDYGIKFLETSAKTSINVEEA 161
Query: 242 FMQIAAELMEKL 253
F +A ++M +L
Sbjct: 162 FFTLARDIMARL 173
>gi|350595168|ref|XP_003134657.2| PREDICTED: ras-related protein Rab-19-like [Sus scrofa]
Length = 154
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 93/118 (78%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFKV+LVG++ VGKTC+V+ F GV+ Q TIGVDF ++ +EI+ +++K+Q+W
Sbjct: 12 ENFDYLFKVILVGDSNVGKTCVVQHFKSGVYTEAQQNTIGVDFTVRALEIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIG 129
>gi|281347015|gb|EFB22599.1| hypothetical protein PANDA_006037 [Ailuropoda melanoleuca]
Length = 196
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 108/160 (67%), Gaps = 13/160 (8%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAG 65
F F++VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIWDTAG
Sbjct: 1 FPFQLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAG 60
Query: 66 QERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSGLK 125
QERFR+ITQSYYRSA+ IL YDI+ + +F + W+ ++ +YA ++++L+G S L
Sbjct: 61 QERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLS 120
Query: 126 IVNEMASAAG--------LLCTVDPALATALASDKTDLDE 157
+ E+ A +LC ++ + A D ++++E
Sbjct: 121 ELREVPLAEAQSLVEHYDILCAIETS-----AKDSSNVEE 155
Score = 39.3 bits (90), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 193 SNNIHCMARNKID-REDREIPTEVGEDFAKRHDMY-YLETSAKASDNVEKLFMQIAAELM 250
SN + + NK D E RE+P + + +D+ +ETSAK S NVE+ F+++A EL+
Sbjct: 106 SNIVQLLIGNKSDLSELREVPLAEAQSLVEHYDILCAIETSAKDSSNVEEAFVRVATELV 165
Query: 251 EK-----LAEKLT 258
+ L+EK T
Sbjct: 166 VRHGGPLLSEKGT 178
>gi|50752811|ref|XP_413757.1| PREDICTED: ras-related protein Rab-8B [Gallus gallus]
Length = 201
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 108/156 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ ++ +E
Sbjct: 125 MNEKRQVSKEKGEKLAIDYGIKFLETSAKSSINVEE 160
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKID-REDREIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D E R++ E GE A + + +LETS
Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNEKRQVSKEKGEKLAIDYGIKFLETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKL 257
AK+S NVE+ F +A ++M KL K+
Sbjct: 152 AKSSINVEEAFFTLARDIMTKLNRKM 177
>gi|302835618|ref|XP_002949370.1| RabD/Rab1 [Volvox carteri f. nagariensis]
gi|401686|sp|P31584.1|YPTV1_VOLCA RecName: Full=GTP-binding protein yptV1
gi|170661|gb|AAA34255.1| small G protein [Volvox carteri]
gi|300265197|gb|EFJ49389.1| RabD/Rab1 [Volvox carteri f. nagariensis]
Length = 203
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 70/135 (51%), Positives = 99/135 (73%), Gaps = 3/135 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGNKS 123
Query: 123 ---GLKIVNEMASAA 134
G K+V+ A+ A
Sbjct: 124 DLTGKKVVDYQAAKA 138
>gi|260949313|ref|XP_002618953.1| GTP-binding protein YPTC1 [Clavispora lusitaniae ATCC 42720]
gi|238846525|gb|EEQ35989.1| GTP-binding protein YPTC1 [Clavispora lusitaniae ATCC 42720]
Length = 206
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 106/151 (70%), Gaps = 3/151 (1%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADNTYTQDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA+ V+++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 123 GL--KIVNEMASAAGLLCTVD-PALATALAS 150
L K V E +A +D P L T+ S
Sbjct: 124 DLSDKKVVEYTTAKEFAEALDIPFLETSALS 154
>gi|395837388|ref|XP_003791617.1| PREDICTED: ras-related protein Rab-19 [Otolemur garnettii]
Length = 217
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 95/123 (77%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK++L+G++ VGKTC+V+ F GV+ Q TIGVDF ++++EI+ +++K+Q+W
Sbjct: 12 ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLEIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRLSTFESVPHWIHEIEKYGAANLVIMLIGNK 131
Query: 122 SGL 124
S L
Sbjct: 132 SDL 134
>gi|126340875|ref|XP_001375267.1| PREDICTED: ras-related protein Rab-19-like [Monodelphis domestica]
Length = 217
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 122/192 (63%), Gaps = 23/192 (11%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E + +LFK++L+G++ VGKTC+V+ F G++ Q TIGVDFM++++E++ +++K+Q+W
Sbjct: 12 ETFDYLFKIILIGDSNVGKTCVVQHFKSGIYTDTQQNTIGVDFMVRSLEVDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+A I+ YD++ + TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSANAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNK 131
Query: 122 SGL--------KIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVC 173
+ L + +A GLL ++ + A + ++DE VF+ +
Sbjct: 132 ADLWDKRHVLFEDACTLAEKYGLLAVLETS-----AKESKNIDE----------VFMLMA 176
Query: 174 IPKLARNEACFY 185
+ARN+ FY
Sbjct: 177 RELIARNDLSFY 188
>gi|255719125|ref|XP_002555843.1| KLTH0G18788p [Lachancea thermotolerans]
gi|238937227|emb|CAR25406.1| KLTH0G18788p [Lachancea thermotolerans CBS 6340]
Length = 204
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 95/123 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF+ + +TIGVDF IKTVE++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ +F+ + WL+EI+ YA+ VL+++VG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDHDSFNDVKMWLQEIDRYATAGVLKLMVGNKS 123
Query: 123 GLK 125
L+
Sbjct: 124 DLQ 126
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 196 IHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
+ M NK D +D R + +V ++FA + +LETSA S NVE+ F+ +A ++ E +A
Sbjct: 115 LKLMVGNKSDLQDKRMVEYDVAKEFADSLQIPFLETSALDSSNVEEAFLTMAKQIKESMA 174
Query: 255 EK 256
++
Sbjct: 175 QQ 176
>gi|395539510|ref|XP_003771711.1| PREDICTED: ras-related protein Rab-19 [Sarcophilus harrisii]
Length = 217
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 126/203 (62%), Gaps = 26/203 (12%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E + +LFK++L+G++ VGKTC+V+ F G++ Q TIGVDF ++++E++ +++K+QIW
Sbjct: 12 ETFDYLFKIILIGDSNVGKTCVVQHFKSGLYTDSQQNTIGVDFTVRSLEVDGKKVKMQIW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+A I+ YD++ + TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSANAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNK 131
Query: 122 SGL--------KIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVC 173
+ L + +A GLL ++ + A + ++DE VF+ +
Sbjct: 132 ADLCDKRHVLFEDACTLAEKHGLLAVLETS-----AKESKNIDE----------VFMLMA 176
Query: 174 IPKLARNEACFYLASLEGHSNNI 196
+ARN+ FY EG NN+
Sbjct: 177 KELIARNDLNFY---GEGPQNNL 196
>gi|363748678|ref|XP_003644557.1| hypothetical protein Ecym_1518 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888189|gb|AET37740.1| hypothetical protein Ecym_1518 [Eremothecium cymbalariae
DBVPG#7215]
Length = 204
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 94/123 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF IKTVE++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ Y + V+++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKTWLQEIDRYGTAGVVKLLVGNKN 123
Query: 123 GLK 125
LK
Sbjct: 124 DLK 126
>gi|289739869|gb|ADD18682.1| Rab protein 1 [Glossina morsitans morsitans]
Length = 205
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 69/134 (51%), Positives = 97/134 (72%), Gaps = 3/134 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++N+ IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDNKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD + Q +F+ + WL EIE YA V ++LVG S
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKS 126
Query: 123 GL---KIVNEMASA 133
L K+V+ +A
Sbjct: 127 DLTTKKVVDHTTAA 140
>gi|348579502|ref|XP_003475518.1| PREDICTED: ras-related protein Rab-19-like [Cavia porcellus]
Length = 217
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 95/123 (77%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
ED +LFKV+L+G++ VGKTC+V+ F GV+ Q TIGVDF +++++I+ +++K+Q+W
Sbjct: 12 EDVDYLFKVILIGDSNVGKTCVVQHFRSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ E+E+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEVEKYGAANLVIMLIGNK 131
Query: 122 SGL 124
S L
Sbjct: 132 SDL 134
>gi|344238128|gb|EGV94231.1| Ras-related protein Rab-19 [Cricetulus griseus]
Length = 218
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 125/198 (63%), Gaps = 24/198 (12%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E+ +LFKV+L+G++ VGKTC+V+ F GV+ Q TIGVDF ++++EI+ +++K+Q+W
Sbjct: 12 ENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG-G 120
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGRN 131
Query: 121 TSGL----KIVNE----MASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAV 172
S L +++ E +A GLL ++ + A + ++DE VFV +
Sbjct: 132 KSNLWENRRVLFEDACTLAEKYGLLAVLETS-----AKESRNIDE----------VFVLM 176
Query: 173 CIPKLARNEACFYLASLE 190
+ARN Y S++
Sbjct: 177 AKELIARNSLHLYGESIQ 194
>gi|406606883|emb|CCH41737.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 205
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 94/122 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTADYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA+ V+++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|350578544|ref|XP_001929064.4| PREDICTED: ras-related protein Rab-8B-like [Sus scrofa]
Length = 207
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 108/156 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ ++ +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSMNVEE 160
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D D R++ E GE A + + +LETS
Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGVGMLTRI 271
AK+S NVE+ F +A ++M KL K+ + G G +I
Sbjct: 152 AKSSMNVEEAFFILARDIMTKLNRKMNDSNSSGAGGPVKI 191
>gi|47209142|emb|CAF90455.1| unnamed protein product [Tetraodon nigroviridis]
Length = 185
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 101/145 (69%), Gaps = 3/145 (2%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAG 65
+LFK++L+G++GVGK+CL+ RF G + +TIGVDF I+TV+++ + +KLQIWDTAG
Sbjct: 2 YLFKLLLIGDSGVGKSCLLLRFADGAYTDSYISTIGVDFKIRTVDMDGKTVKLQIWDTAG 61
Query: 66 QERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSGL- 124
QERFR+IT SYYR AH ++LVYD++ Q +FD + W+ EIE YA V R+LVG S L
Sbjct: 62 QERFRTITSSYYRGAHGIVLVYDVTEQASFDNVRLWMDEIERYACEDVSRLLVGNKSDLL 121
Query: 125 --KIVNEMASAAGLLCTVDPALATA 147
K+V+ A+ C P L T+
Sbjct: 122 AQKVVDAAAAQDLASCLKIPFLETS 146
>gi|296483236|tpg|DAA25351.1| TPA: ras-related protein Rab-8B [Bos taurus]
gi|440907016|gb|ELR57209.1| Ras-related protein Rab-8B [Bos grunniens mutus]
Length = 207
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 108/156 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ ++ +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSMNVEE 160
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D D R++ E GE A + + +LETS
Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGVGMLTRI 271
AK+S NVE+ F +A ++M KL K+ + G G +I
Sbjct: 152 AKSSMNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGPVKI 191
>gi|24306110|gb|AAN52527.1|AF454544_2 GTP-binding protein [Ogataea angusta]
gi|24795513|gb|AAN64444.1|AF346820_1 GTP-binding protein [Ogataea angusta]
gi|320583918|gb|EFW98131.1| GTP-binding protein [Ogataea parapolymorpha DL-1]
Length = 203
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 93/117 (79%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFAEDTYTQDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA+ V+++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVNQWLQEIDRYATSGVMKLLVG 120
>gi|119604354|gb|EAW83948.1| GTP-binding protein RAB19B [Homo sapiens]
Length = 217
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 95/123 (77%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK++L+G++ VGKTC+V+ F GV+ Q TIGVDF +++++I+ +++K+Q+W
Sbjct: 12 ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + V+ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNK 131
Query: 122 SGL 124
L
Sbjct: 132 CDL 134
>gi|431911652|gb|ELK13800.1| Ras-related protein Rab-19 [Pteropus alecto]
Length = 217
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 95/123 (77%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK++L+G++ VGKTC+V+ F GV+ Q TIGVDF ++++EI+ +++K+Q+W
Sbjct: 12 ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYAETQQNTIGVDFTVRSLEIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVVMLIGNK 131
Query: 122 SGL 124
L
Sbjct: 132 CDL 134
>gi|403223777|dbj|BAM41907.1| Rab GTPase [Theileria orientalis strain Shintoku]
Length = 210
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/132 (49%), Positives = 95/132 (71%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+DY +LFK+VL+G++GVGK+CL+ RF F TIGVDF +TV +NN+RIKLQIW
Sbjct: 7 KDYDYLFKLVLIGDSGVGKSCLLLRFADDSFTDSYITTIGVDFRFRTVIVNNKRIKLQIW 66
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+IT +YYR A +I+VYD++ + +F+ + DWL E+ +YAS ++L+G
Sbjct: 67 DTAGQERFRTITSTYYRGADGIIMVYDVTDKASFEHINDWLNEVNKYASEDTCKLLLGNK 126
Query: 122 SGLKIVNEMASA 133
++ ++AS
Sbjct: 127 CDIEDNRDVAST 138
>gi|149062039|gb|EDM12462.1| rCG48149, isoform CRA_d [Rattus norvegicus]
Length = 193
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 113/176 (64%), Gaps = 17/176 (9%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 123 GL---KIVN-----EMASAAGL---------LCTVDPALATALASDKTDLDEDEHV 161
L K+V+ E A + G+ V+ A T A K +++DE +
Sbjct: 124 DLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMEKDEKI 179
>gi|432092263|gb|ELK24887.1| Ras-related protein Rab-8B [Myotis davidii]
Length = 207
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASLDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ + +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEE 160
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK D D R++ E GE A + + +LETSAK+S NVE+ F +A ++M KL K+
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDS 180
Query: 261 HDRGVGMLTRI 271
+ G G +I
Sbjct: 181 NSSGAGGPVKI 191
>gi|239915976|ref|NP_001008749.2| ras-related protein Rab-19 [Homo sapiens]
gi|114616316|ref|XP_001153248.1| PREDICTED: ras-related protein Rab-19 isoform 1 [Pan troglodytes]
gi|397484561|ref|XP_003813442.1| PREDICTED: ras-related protein Rab-19 [Pan paniscus]
gi|426358117|ref|XP_004046368.1| PREDICTED: ras-related protein Rab-19 [Gorilla gorilla gorilla]
gi|158513667|sp|A4D1S5.2|RAB19_HUMAN RecName: Full=Ras-related protein Rab-19
gi|187954847|gb|AAI40797.1| RAB19 protein [Homo sapiens]
Length = 217
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 95/123 (77%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK++L+G++ VGKTC+V+ F GV+ Q TIGVDF +++++I+ +++K+Q+W
Sbjct: 12 ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + V+ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNK 131
Query: 122 SGL 124
L
Sbjct: 132 CDL 134
>gi|388581092|gb|EIM21402.1| GTP-binding protein ypt1 [Wallemia sebi CBS 633.66]
Length = 205
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 93/123 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY FLFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+EI+ + +KLQIWD
Sbjct: 4 DYDFLFKLLLIGDSGVGKSCLLLRFADDTYTSSYISTIGVDFKIRTIEIDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ +FD ++ WL+EI+ YA V ++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDNESFDHVSQWLQEIDRYACEGVNKLLVGNKN 123
Query: 123 GLK 125
L+
Sbjct: 124 DLE 126
>gi|57097619|ref|XP_539883.1| PREDICTED: ras-related protein Rab-19 [Canis lupus familiaris]
Length = 217
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 95/123 (77%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK++L+G++ VGKTC+V+ F GV+ Q TIGVDF ++++EI+ +++K+Q+W
Sbjct: 12 ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLEIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNK 131
Query: 122 SGL 124
L
Sbjct: 132 CDL 134
>gi|348675760|gb|EGZ15578.1| hypothetical protein PHYSODRAFT_354794 [Phytophthora sojae]
Length = 203
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 88/122 (72%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY LFK+VL+G++GVGK+CL+ RF F TIGVDF +TV+I+N+ +KLQIWD
Sbjct: 4 DYDHLFKLVLIGDSGVGKSCLLLRFADDAFTESYITTIGVDFRFRTVKIDNKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT +YYR A +I+VYD++ Q +FD + DWL E+ YAS ++LVG S
Sbjct: 64 TAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLNEVNRYASEGTCKLLVGNKS 123
Query: 123 GL 124
+
Sbjct: 124 DI 125
>gi|410912320|ref|XP_003969638.1| PREDICTED: ras-related protein Rab-8B-like [Takifugu rubripes]
gi|410930031|ref|XP_003978402.1| PREDICTED: ras-related protein Rab-8B-like [Takifugu rubripes]
Length = 205
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 109/160 (68%), Gaps = 1/160 (0%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+TVE++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+L+G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWMRNIEEHASSDVERMLLGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLA 163
+ ++A G +D ++ S K L+ +E L
Sbjct: 125 MD-KRQVAKERGEKLAIDYSIKFLETSAKAGLNVEEAFLT 163
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 7/85 (8%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDREDREIPTEVGEDFAKRHDMYYLETSA 232
NE F ++ ++E H S+++ M NK D + R++ E GE A + + +LETSA
Sbjct: 92 NEKSFDNIRNWMRNIEEHASSDVERMLLGNKCDMDKRQVAKERGEKLAIDYSIKFLETSA 151
Query: 233 KASDNVEKLFMQIAAELMEKLAEKL 257
KA NVE+ F+ +A ++M +L+ K+
Sbjct: 152 KAGLNVEEAFLTLARDIMGRLSRKM 176
>gi|157116294|ref|XP_001652810.1| rab 19, 41 and [Aedes aegypti]
gi|108876535|gb|EAT40760.1| AAEL007525-PA [Aedes aegypti]
Length = 219
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 100/154 (64%), Gaps = 1/154 (0%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E + FLFK+VL+G+ G GKTC+V+RF G F G TIGVDF +K V ++ +++KLQIW
Sbjct: 16 ESFDFLFKIVLIGDCGTGKTCIVQRFKSGNFIESHGNTIGVDFSMKAVTVDGKKVKLQIW 75
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ +I+VYDI+ + +F L W+ E+ Y + V+ ++G
Sbjct: 76 DTAGQERFRTITQSYYRSANGVIIVYDITKRSSFLNLQRWIDEVRRYTASNVMIFVIGNK 135
Query: 122 SGLKIVNEMASA-AGLLCTVDPALATALASDKTD 154
L + E+ A A +C P + + + D
Sbjct: 136 CDLDAIREVEFAEAQTMCQYIPEIMFVMETSAKD 169
>gi|301123057|ref|XP_002909255.1| Rab1 family GTPase, putative [Phytophthora infestans T30-4]
gi|262100017|gb|EEY58069.1| Rab1 family GTPase, putative [Phytophthora infestans T30-4]
Length = 203
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 88/122 (72%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY LFK+VL+G++GVGK+CL+ RF F TIGVDF +TV+I+N+ +KLQIWD
Sbjct: 4 DYDHLFKLVLIGDSGVGKSCLLLRFADDAFTESYITTIGVDFRFRTVKIDNKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT +YYR A +I+VYD++ Q +FD + DWL E+ YAS ++LVG S
Sbjct: 64 TAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLNEVNRYASEGTCKLLVGNKS 123
Query: 123 GL 124
+
Sbjct: 124 DI 125
>gi|195427457|ref|XP_002061793.1| GK17190 [Drosophila willistoni]
gi|194157878|gb|EDW72779.1| GK17190 [Drosophila willistoni]
Length = 219
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 89/123 (72%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ FLFK+VL+G+ G GKTC+V RF G F G TIGVDF +KT+ + +++KLQIW
Sbjct: 16 ENFDFLFKIVLIGDCGTGKTCIVERFKTGNFVERHGNTIGVDFSMKTIAVEGKQVKLQIW 75
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ +++VYDI+ + +F L W+ E+ Y + VL +L+G
Sbjct: 76 DTAGQERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILIGNK 135
Query: 122 SGL 124
L
Sbjct: 136 CDL 138
>gi|442570869|pdb|4I1O|A Chain A, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570871|pdb|4I1O|C Chain C, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570873|pdb|4I1O|E Chain E, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570875|pdb|4I1O|G Chain G, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
Length = 181
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 113/165 (68%), Gaps = 14/165 (8%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
M +Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQI
Sbjct: 3 MPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGG 120
WDTAGQERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG
Sbjct: 63 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 122
Query: 121 TSGL---KIVN-----EMASAAGLLCTVDPALATALASDKTDLDE 157
S L K+V+ E A + G+ P L T+ A + T++++
Sbjct: 123 KSDLTTKKVVDNTTAKEFADSLGI-----PFLETS-AKNATNVEQ 161
>gi|388517121|gb|AFK46622.1| unknown [Medicago truncatula]
Length = 182
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 94/117 (80%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F G +TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTGFISTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVG 127
>gi|351705685|gb|EHB08604.1| Ras-related protein Rab-30 [Heterocephalus glaber]
Length = 232
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/88 (76%), Positives = 76/88 (86%)
Query: 32 FPPGQGATIGVDFMIKTVEINNERIKLQIWDTAGQERFRSITQSYYRSAHALILVYDISC 91
F QGA IGVDFMIKTVEIN E++KLQIWDTAGQERFRSITQSYYR A+ALIL YDI+C
Sbjct: 64 FSTRQGAIIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRCANALILTYDITC 123
Query: 92 QPTFDCLTDWLREIEEYASFKVLRVLVG 119
+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 124 EESFRCLPEWLREIEQYASNKVISVLVG 151
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 11/81 (13%)
Query: 173 CIPKLARNEACFYLASLEGHSNN--IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLE 229
C+P+ +L +E +++N I + NKID E RE+ + E+F+K DMYYLE
Sbjct: 129 CLPE--------WLREIEQYASNKVISVLVGNKIDLAERREVSQQRAEEFSKAQDMYYLE 180
Query: 230 TSAKASDNVEKLFMQIAAELM 250
TS K SDNVEKLF+ +A + +
Sbjct: 181 TSGKESDNVEKLFLDLACQFI 201
>gi|148236958|ref|NP_001087273.1| RAB8B, member RAS oncogene family [Xenopus laevis]
gi|51873938|gb|AAH78493.1| MGC85265 protein [Xenopus laevis]
Length = 207
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 108/156 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ ++ +E
Sbjct: 125 MNDKRQVSREKGEKLAIDYGIKFLETSAKSSINVEE 160
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D D R++ E GE A + + +LETS
Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSREKGEKLAIDYGIKFLETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKL 257
AK+S NVE+ F + ++M KL K+
Sbjct: 152 AKSSINVEEAFFTLGRDIMTKLNRKM 177
>gi|284055664|pdb|3JZA|A Chain A, Crystal Structure Of Human Rab1b In Complex With The Gef
Domain Of DrraSIDM FROM LEGIONELLA PNEUMOPHILA
gi|302148858|pdb|3NKV|A Chain A, Crystal Structure Of Rab1b Covalently Modified With Amp At
Y77
gi|302148859|pdb|3NKV|B Chain B, Crystal Structure Of Rab1b Covalently Modified With Amp At
Y77
gi|442570813|pdb|4HLQ|B Chain B, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570815|pdb|4HLQ|D Chain D, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570817|pdb|4HLQ|F Chain F, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570819|pdb|4HLQ|H Chain H, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570821|pdb|4HLQ|J Chain J, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
Length = 175
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 113/165 (68%), Gaps = 14/165 (8%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
M +Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQI
Sbjct: 3 MPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGG 120
WDTAGQERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG
Sbjct: 63 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 122
Query: 121 TSGL---KIVN-----EMASAAGLLCTVDPALATALASDKTDLDE 157
S L K+V+ E A + G+ P L T+ A + T++++
Sbjct: 123 KSDLTTKKVVDNTTAKEFADSLGI-----PFLETS-AKNATNVEQ 161
>gi|297717321|ref|XP_002834898.1| PREDICTED: ras-related protein Rab-43-like [Pongo abelii]
Length = 212
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 107/164 (65%), Gaps = 13/164 (7%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F GQG+TIGVDF +K +EI +R+KLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCMVQRFKTGAFLEGQGSTIGVDFTMKMLEIQGKRVKLQIW 72
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQ+ FR+ITQ YYRSA+ IL YDI+ + +F + W+ ++ +Y ++++L+
Sbjct: 73 DTAGQKWFRTITQRYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYTGSNIVQLLIRNK 132
Query: 122 SGLKIVNEMASAAG--------LLCTVDPALATALASDKTDLDE 157
S L + E++ A +LC ++ + A D + ++E
Sbjct: 133 SDLSELREVSLAEAQSLAEHYEILCAIETS-----AKDSSKVEE 171
>gi|62857817|ref|NP_001017246.1| ras-related protein Rab-19 [Xenopus (Silurana) tropicalis]
gi|123893500|sp|Q28IZ3.1|RAB19_XENTR RecName: Full=Ras-related protein Rab-19
gi|89268291|emb|CAJ82446.1| RAB19, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 213
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 91/123 (73%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ + FLFK++L+G++ VGKTC+V RF GVF Q TIGVDF ++ + IN +++K+Q+W
Sbjct: 10 DPFDFLFKIILIGDSNVGKTCVVHRFQSGVFAHNQQNTIGVDFTVRNMNINGKKVKVQVW 69
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAH I+ YDI+ + +F+ + W+ E E+Y + ++ +L+G
Sbjct: 70 DTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYEAEKYGAANLMMMLIGNK 129
Query: 122 SGL 124
S L
Sbjct: 130 SDL 132
>gi|338724303|ref|XP_001498622.3| PREDICTED: ras-related protein Rab-19-like [Equus caballus]
Length = 217
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 119/192 (61%), Gaps = 23/192 (11%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK++L+G++ VGKTC+V+ F GV+ Q TIGVDF ++++EI+ +++K+Q+W
Sbjct: 12 ENFDYLFKIILIGDSNVGKTCVVQHFRSGVYTETQQNTIGVDFTVRSLEIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLIIMLIGNK 131
Query: 122 SGL--------KIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVC 173
L + +A GLL ++ + A + ++DE VFV +
Sbjct: 132 CDLWENRHVLFEDACTLAEKYGLLAVLETS-----AKESRNIDE----------VFVLMA 176
Query: 174 IPKLARNEACFY 185
+ARN Y
Sbjct: 177 RELIARNSLQLY 188
>gi|432857616|ref|XP_004068718.1| PREDICTED: nck-associated protein 1-like [Oryzias latipes]
Length = 1123
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 110/188 (58%), Gaps = 8/188 (4%)
Query: 367 LNEIIKPG--AESYRKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDK 424
LN+ + P AES R Q + KK + K+ KPGAES RK R T +DK
Sbjct: 619 LNDQLLPKHCAESISAARHRKQKKAVPKKGEVQKE------KPGAESQRKDRTVTTNLDK 672
Query: 425 LHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPS 484
LH+ L ELC + C++ +D P E+L HLE RFS +V M +N T EI +PS
Sbjct: 673 LHLILRELCSTYSLCSDFLNFDHIVVPTEFLLSHLEQRFSEIIVRMANYNQTTQEITRPS 732
Query: 485 ELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLL 544
+LLA++RAY L + +Y+++D+TR+ LLQQTQ +DSHG +T+ LY WY E LL
Sbjct: 733 DLLAAIRAYTASLHGLSSYINVDVTRLVKTVLLQQTQPLDSHGGQTITTLYTNWYLEGLL 792
Query: 545 RRVSETQV 552
R+ S + +
Sbjct: 793 RQASNSLI 800
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 85/140 (60%), Gaps = 10/140 (7%)
Query: 537 QWYSEVLLRRVSETQV-----KSLNLLNFLRVYT-----VENYVHIDMTRVFNNALLQQT 586
Q +SE+++R + Q + +LL +R YT + +Y+++D+TR+ LLQQT
Sbjct: 709 QRFSEIIVRMANYNQTTQEITRPSDLLAAIRAYTASLHGLSSYINVDVTRLVKTVLLQQT 768
Query: 587 QRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDV 646
Q +DSHG +T+ LY WY E LLR+ S I + FVS T + AEEFSDV
Sbjct: 769 QPLDSHGGQTITTLYTNWYLEGLLRQASNSLIVHCPTRHCFVSQTTDNEHSLRAEEFSDV 828
Query: 647 NELRALADLIGPYGMKLLNE 666
EL+ALA+LIGPYG+K L+E
Sbjct: 829 AELQALAELIGPYGLKFLSE 848
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 69/97 (71%), Gaps = 4/97 (4%)
Query: 252 KLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK- 310
KLAEKLT++++RG G+L R+ IKK C +K +P+FL+DK++E IK I KKFPNID +
Sbjct: 6 KLAEKLTVLNERGQGVLIRMNYIKKLCSHSKLRPTFLTDKAMEPAIKYINKKFPNIDFRG 65
Query: 311 ---SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
+++ I + +S+I+++ +Y +F+D+L KD Y
Sbjct: 66 NNHNLTAIQRQKSEILQATKNFYDSFLDVLELKDHAY 102
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 39/182 (21%)
Query: 129 EMASAAGLLCTVDPALATA---LASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEACFY 185
E+ SAAGL C +DPAL A + +D T L+E E L+ LL+V++AV +P LA + Y
Sbjct: 955 ELVSAAGLKCDIDPALVAAIRNMHTDNTSLEE-EFKLSQLLLVYIAVSLPFLALDPNSLY 1013
Query: 186 LASLEGHSNNIHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVE---KLF 242
GH+NNIHC+A T + + FA M+ ++ + N+E K F
Sbjct: 1014 NQEHGGHNNNIHCLA------------TAINQVFAA---MFTVQ-----NKNIEQQLKEF 1053
Query: 243 MQIAAELMEKLA---EKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQ 299
+ +A+ + +L EK+ + + V +L + + FLS LESC
Sbjct: 1054 LLLASSTLLQLGQNVEKIDVKNRESVYLLLHM---------IVEESQFLSQDMLESCFPY 1104
Query: 300 IV 301
++
Sbjct: 1105 VL 1106
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
FN AHEM + S+ ++PRLGQM ++Y+ P KKL E+F PH
Sbjct: 154 FNCAHEMTNGTSEPSYPRLGQMFLEYDHPWKKLLEDFGPH 193
>gi|147903729|ref|NP_001090677.1| RAB8B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117558080|gb|AAI27331.1| rab8b protein [Xenopus (Silurana) tropicalis]
Length = 207
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 108/156 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ ++ +E
Sbjct: 125 MNDKRQVSREKGEKLAIDYGIKFLETSAKSSINVEE 160
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D D R++ E GE A + + +LETS
Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSREKGEKLAIDYGIKFLETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKL 257
AK+S NVE+ F +A ++M KL K+
Sbjct: 152 AKSSINVEEAFFTLARDIMTKLNRKM 177
>gi|432958931|ref|XP_004086115.1| PREDICTED: ras-related protein Rab-8B-like [Oryzias latipes]
Length = 206
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 110/160 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+TV+++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVDLDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVERMVLGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLA 163
+ +++ G +D ++ S K+ ++ +E L
Sbjct: 125 MNDRRQVSKERGEKLAIDYSIKFLETSAKSSINVEEAFLT 164
Score = 45.8 bits (107), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 202 NKIDREDR-EIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D DR ++ E GE A + + +LETSAK+S NVE+ F+ +A ++M +L K+
Sbjct: 121 NKCDMNDRRQVSKERGEKLAIDYSIKFLETSAKSSINVEEAFLTLARDIMSRLNRKM 177
>gi|140832723|gb|AAI35799.1| rab8b protein [Xenopus (Silurana) tropicalis]
Length = 205
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 108/156 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 3 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 62
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 63 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 122
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ ++ +E
Sbjct: 123 MNDKRQVSREKGEKLAIDYGIKFLETSAKSSINVEE 158
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D D R++ E GE A + + +LETS
Sbjct: 90 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSREKGEKLAIDYGIKFLETS 149
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKL 257
AK+S NVE+ F +A ++M KL K+
Sbjct: 150 AKSSINVEEAFFTLARDIMTKLNRKM 175
>gi|403276230|ref|XP_003929809.1| PREDICTED: ras-related protein Rab-19 [Saimiri boliviensis
boliviensis]
Length = 217
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 126/219 (57%), Gaps = 37/219 (16%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK++L+G++ VGKTC+V+ F GV+ Q TIGVDF +++++I+ +++K+Q+W
Sbjct: 12 ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ TF+ + W+ EIE+Y + V+ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRWSTFESIPHWIHEIEKYGAANVVIMLIGNK 131
Query: 122 SGL--------KIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVC 173
L + +A GLL ++ + A + ++DE VFV +
Sbjct: 132 CDLWEKRHVLFEDACTLAEKYGLLAVLETS-----AKESKNIDE----------VFVLMA 176
Query: 174 IPKLARNEACFY----LASL----------EGHSNNIHC 198
+ARN Y L SL +G S HC
Sbjct: 177 KELIARNSLHHYGESALNSLPLDSSPVLMAQGPSEKTHC 215
>gi|313231127|emb|CBY19125.1| unnamed protein product [Oikopleura dioica]
Length = 220
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 93/115 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF + F P +TIG+DF I+TVEI+ +RIKLQ+WDT
Sbjct: 19 YDYLFKLLLIGDSGVGKTCLLFRFAENSFNPTFISTIGIDFKIQTVEIDGKRIKLQVWDT 78
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLV 118
AGQERFR+IT +YYR A ++LVYD++ + TF+ +T+WL+ IEE+A+ V ++LV
Sbjct: 79 AGQERFRTITTAYYRGAMGILLVYDVTSKKTFENITNWLKNIEEHAAEGVEQLLV 133
>gi|149773480|ref|NP_001092729.1| ras-related protein Rab-8B [Danio rerio]
gi|148744724|gb|AAI42847.1| Rab8b protein [Danio rerio]
Length = 209
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ + +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEE 160
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D D R++ E GE A + + +LETS
Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKL 257
AK+S NVE+ F+ +A ++M +L K+
Sbjct: 152 AKSSTNVEEAFVTLARDIMTRLNRKM 177
>gi|31199429|ref|XP_308662.1| AGAP007096-PA [Anopheles gambiae str. PEST]
gi|21291806|gb|EAA03951.1| AGAP007096-PA [Anopheles gambiae str. PEST]
Length = 220
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 100/154 (64%), Gaps = 1/154 (0%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E + FLFK+VL+G+ G GKTC+V+RF G F G TIGVDF +K V ++ +++KLQIW
Sbjct: 16 ESFDFLFKIVLIGDCGTGKTCIVQRFKSGNFIESHGNTIGVDFSMKAVSVDGKKVKLQIW 75
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ +++VYDI+ + TF L W+ E+ Y + V+ ++G
Sbjct: 76 DTAGQERFRTITQSYYRSANGVLIVYDITKRSTFLSLQRWIDEVRRYTASNVMIFVIGNK 135
Query: 122 SGLKIVNEMA-SAAGLLCTVDPALATALASDKTD 154
S L E+ S A LC P + + + D
Sbjct: 136 SDLDEEREVEFSEAENLCQYIPEVMFVMETSAKD 169
>gi|301756855|ref|XP_002914277.1| PREDICTED: ras-related protein Rab-8B-like [Ailuropoda melanoleuca]
gi|281347305|gb|EFB22889.1| hypothetical protein PANDA_002150 [Ailuropoda melanoleuca]
Length = 207
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ + +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEE 160
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D D R++ E GE A + + +LETS
Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGVGMLTRI 271
AK+S NVE+ F +A ++M KL K+ + G G +I
Sbjct: 152 AKSSTNVEEAFFTLARDIMTKLNRKMNDSNSSGSGGPVKI 191
>gi|291402892|ref|XP_002718230.1| PREDICTED: RAB8B, member RAS oncogene family [Oryctolagus
cuniculus]
gi|354474332|ref|XP_003499385.1| PREDICTED: ras-related protein Rab-8B-like [Cricetulus griseus]
gi|410961066|ref|XP_003987106.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Felis catus]
gi|344251051|gb|EGW07155.1| Ras-related protein Rab-8B [Cricetulus griseus]
gi|351698401|gb|EHB01320.1| Ras-related protein Rab-8B [Heterocephalus glaber]
gi|431895937|gb|ELK05355.1| Ras-related protein Rab-8B [Pteropus alecto]
Length = 207
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ + +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEE 160
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D D R++ E GE A + + +LETS
Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGVGMLTRI 271
AK+S NVE+ F +A ++M KL K+ + G G +I
Sbjct: 152 AKSSTNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGPVKI 191
>gi|431906666|gb|ELK10787.1| Ras-related protein Rab-26 [Pteropus alecto]
Length = 284
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 133/264 (50%), Gaps = 58/264 (21%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQG-ATIGVDFMIKTVEINNERIKLQIWD 62
Y FKV+LVG++GVGKTCL+ RF G F G +T+G+DF K ++++ ++KLQIWD
Sbjct: 60 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWD 119
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFRS+T +YYR AHAL+L+YD++ + +FD + WL EI+EYA V+ +L+G
Sbjct: 120 TAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIQEYAQHDVVLMLLGNKV 179
Query: 123 GLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEA 182
G+ C + P LA P +
Sbjct: 180 GIPT-----------CPLQPGSEGRLA-------------------------PGQLSPRS 203
Query: 183 CFYLASLEGHSNNIHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLF 242
+ + S ++R + E GE AK + + ++ETSAK NV+ F
Sbjct: 204 LYQVDST-----------------QERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAF 246
Query: 243 MQIAAEL----MEKLAEKLTIMHD 262
IA EL M+ +E +HD
Sbjct: 247 TAIAKELKQRSMKAPSEPRFQLHD 270
>gi|301756779|ref|XP_002914238.1| PREDICTED: ras-related protein Rab-19-like [Ailuropoda melanoleuca]
Length = 217
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 95/123 (77%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK++L+G++ VGKTC+V+ F GV+ Q TIGVDF +++++I+ +++K+Q+W
Sbjct: 12 ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTEAQQNTIGVDFTVRSLDIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNK 131
Query: 122 SGL 124
L
Sbjct: 132 CDL 134
>gi|403358406|gb|EJY78849.1| RAS small GTpases RIC1/ypt1, putative [Oxytricha trifallax]
Length = 208
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 97/133 (72%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFKV+L+GN+GVGK+ L+ RF VF TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKVLLIGNSGVGKSSLLLRFADDVFTDNFMPTIGVDFKIRTIEVDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERF++IT SYY+ AH +I+ YDI+ + +F + +W+ E+E++AS + R+LVG S
Sbjct: 64 TAGQERFKTITSSYYKGAHGIIVTYDITDRESFSAIENWMNEVEKHASDNISRILVGNKS 123
Query: 123 GLKIVNEMASAAG 135
++ ++++ G
Sbjct: 124 DMEDARQVSTDEG 136
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 185 YLASLEGH-SNNI-HCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
++ +E H S+NI + NK D ED R++ T+ G++ A+ +++ +LETSAK NVE+
Sbjct: 102 WMNEVEKHASDNISRILVGNKSDMEDARQVSTDEGKELAEHYNVRFLETSAKDCKNVEEA 161
Query: 242 FMQIAAELMEKLA 254
F + E+ ++A
Sbjct: 162 FTMMTREIKSRVA 174
>gi|74831253|emb|CAI39271.1| rab_C85 [Paramecium tetraurelia]
Length = 219
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 98/140 (70%), Gaps = 1/140 (0%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY FLFKV+L+GN+GVGK+C++ R+++ F TIGVDF KTV I +KLQIWD
Sbjct: 6 DYHFLFKVLLIGNSGVGKSCMLMRYSENQFTNNFYNTIGVDFKTKTVAIGEHNVKLQIWD 65
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQ+RFR+IT SYYR A +I+VYDI+ + +F+ + W+ EI++YAS V R+LVG +
Sbjct: 66 TAGQDRFRTITCSYYRGAQGIIIVYDITDRESFENVKTWIAEIDKYASESVNRMLVGNKA 125
Query: 123 GLKIVNEMASAAGL-LCTVD 141
+ E++ GL LC +D
Sbjct: 126 DITERREVSYEEGLELCNLD 145
>gi|328866656|gb|EGG15039.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 202
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+N + IKLQIWD
Sbjct: 4 DYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + TFD + WL+EI+ +A V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDRVTFDNVRQWLQEIDRFACESVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|428184966|gb|EKX53820.1| hypothetical protein GUITHDRAFT_150303 [Guillardia theta CCMP2712]
Length = 200
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 110/163 (67%), Gaps = 14/163 (8%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTLELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + W+ EI+ YA+ KV ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWMNEIDRYANDKVNKMLVGNKS 123
Query: 123 GL--------KIVNEMASAAGLLCTVDPALATALASDKTDLDE 157
L + E A + G+ P L T+ A D T++++
Sbjct: 124 DLASKRAVDTSVAKEYADSLGI-----PFLETS-AKDSTNVEQ 160
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 209 REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAE 255
R + T V +++A + +LETSAK S NVE+ F+ +AAE+ ++A+
Sbjct: 129 RAVDTSVAKEYADSLGIPFLETSAKDSTNVEQAFITMAAEIKARMAQ 175
>gi|410961068|ref|XP_003987107.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Felis catus]
Length = 190
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 108/157 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEH 160
+ +++ G +D + S K+ + +E+
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEN 161
>gi|23463313|ref|NP_695229.1| ras-related protein Rab-8B [Rattus norvegicus]
gi|27734154|ref|NP_775589.1| ras-related protein Rab-8B [Mus musculus]
gi|2500066|sp|P70550.1|RAB8B_RAT RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|46576875|sp|P61028.1|RAB8B_MOUSE RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|1314637|gb|AAA99782.1| GTPase Rab8b [Rattus norvegicus]
gi|26351205|dbj|BAC39239.1| unnamed protein product [Mus musculus]
gi|37589192|gb|AAH59208.1| RAB8B, member RAS oncogene family [Mus musculus]
gi|74212761|dbj|BAE33350.1| unnamed protein product [Mus musculus]
gi|112292971|dbj|BAF02863.1| Rab8B [Mus musculus]
gi|148694186|gb|EDL26133.1| RAB8B, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|149028910|gb|EDL84251.1| RAB8B, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|165970644|gb|AAI58580.1| RAB8B, member RAS oncogene family [Rattus norvegicus]
gi|187956868|gb|AAI57975.1| RAB8B, member RAS oncogene family [Mus musculus]
gi|335775450|gb|AEH58576.1| Ras-related protein Rab-8B-like protein [Equus caballus]
Length = 207
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ + +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEE 160
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D D R++ E GE A + + +LETS
Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGVGMLTRI 271
AK+S NVE+ F +A ++M KL K+ + G G +I
Sbjct: 152 AKSSTNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGPVKI 191
>gi|440802525|gb|ELR23454.1| Rasrelated protein ORAB-1, putative [Acanthamoeba castellanii str.
Neff]
Length = 210
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/135 (51%), Positives = 95/135 (70%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
M DY LFK+++VG++GVGK+ L+ RFT F +TIGVDF I+TV ++ + IK+QI
Sbjct: 1 MSDYDHLFKILMVGDSGVGKSSLLLRFTDDTFTDNFISTIGVDFKIRTVNLDGKVIKMQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGG 120
WDTAGQERFR+IT SYYR AH +ILVYD++ Q +F+ WL EIE YA V+++LVG
Sbjct: 61 WDTAGQERFRTITSSYYRGAHGVILVYDVTDQVSFNNARQWLTEIERYACGNVVKLLVGN 120
Query: 121 TSGLKIVNEMASAAG 135
S L +++A G
Sbjct: 121 KSDLVSKRVVSTATG 135
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 167 MVFVAVCIPKLARNEACFYLASLEGHS--NNIHCMARNKIDR-EDREIPTEVGEDFAKRH 223
++ V +++ N A +L +E ++ N + + NK D R + T G++FA +
Sbjct: 83 VILVYDVTDQVSFNNARQWLTEIERYACGNVVKLLVGNKSDLVSKRVVSTATGKEFADQF 142
Query: 224 DMYYLETSAKASDNVEKLFMQIAAELMEKL 253
+ ++E SAK NV++ FM + E+ EK+
Sbjct: 143 HLPFIEASAKDGSNVKQAFMTLVKEVYEKV 172
>gi|308044223|ref|NP_001183904.1| uncharacterized protein LOC100502497 [Zea mays]
gi|238015358|gb|ACR38714.1| unknown [Zea mays]
Length = 214
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY FL K++L+G++GVGK+CL+ RF+ G F TIG+DF I+TVE++ +RIKLQIWD
Sbjct: 11 DYDFLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQ 168
Query: 241 LFMQIAAELMEKLAEKLTIMHDRGVGM 267
+F IA ++ ++L+E + DR + +
Sbjct: 169 VFFSIARDIKQRLSESDSKPEDRTISI 195
>gi|417397109|gb|JAA45588.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 207
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ + +E
Sbjct: 125 MNDRRQVSKERGEKLAIDYGIKFLETSAKSSTNVEE 160
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDREDR-EIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D DR ++ E GE A + + +LETS
Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDRRQVSKERGEKLAIDYGIKFLETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGVGMLTRI 271
AK+S NVE+ F +A ++M KL K+ + G G +I
Sbjct: 152 AKSSTNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGPVKI 191
>gi|403298224|ref|XP_003939930.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Saimiri
boliviensis boliviensis]
Length = 190
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 108/157 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEH 160
+ +++ G +D + S K+ + +E+
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEN 161
>gi|332235869|ref|XP_003267127.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Nomascus
leucogenys]
gi|397515494|ref|XP_003827985.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Pan paniscus]
gi|402874513|ref|XP_003901080.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Papio anubis]
Length = 190
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 108/157 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEH 160
+ +++ G +D + S K+ + +E+
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEN 161
>gi|168029477|ref|XP_001767252.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681507|gb|EDQ67933.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
Length = 204
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|356983948|gb|AET43936.1| Ras-related protein Rab-1A, partial [Reishia clavigera]
Length = 195
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
>gi|296213405|ref|XP_002753255.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Callithrix
jacchus]
Length = 207
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ + +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEE 160
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D D R++ E GE A + + +LETS
Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGVGMLTRI 271
AK+S NVE+ F +A ++M KL K+ + G G +I
Sbjct: 152 AKSSTNVEEAFFTLARDIMTKLNRKMNDSNSAGAGGPVKI 191
>gi|197100646|ref|NP_001124875.1| ras-related protein Rab-8B [Pongo abelii]
gi|395822281|ref|XP_003784449.1| PREDICTED: ras-related protein Rab-8B [Otolemur garnettii]
gi|403298222|ref|XP_003939929.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Saimiri
boliviensis boliviensis]
gi|75070935|sp|Q5REC9.1|RAB8B_PONAB RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|55726211|emb|CAH89878.1| hypothetical protein [Pongo abelii]
Length = 207
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ + +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEE 160
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D D R++ E GE A + + +LETS
Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGVGMLTRI 271
AK+S NVE+ F +A ++M KL K+ + G G +I
Sbjct: 152 AKSSTNVEEAFFTLARDIMTKLNRKMNDSNSAGAGGPVKI 191
>gi|426228109|ref|XP_004008157.1| PREDICTED: ras-related protein Rab-19 [Ovis aries]
Length = 217
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 93/118 (78%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK++L+G++ VGKTC+V+ F GV+ Q TIGVDF ++ +EI+ +++K+Q+W
Sbjct: 12 ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTEAQQNTIGVDFTVRALEIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIG 129
>gi|403072070|pdb|4FMC|B Chain B, Espg-Rab1 Complex
gi|403072072|pdb|4FMC|D Chain D, Espg-Rab1 Complex
gi|403072076|pdb|4FMD|B Chain B, Espg-Rab1 Complex Structure At 3.05 A
gi|403072078|pdb|4FMD|D Chain D, Espg-Rab1 Complex Structure At 3.05 A
gi|403072082|pdb|4FME|B Chain B, Espg-Rab1-Arf6 Complex
gi|403072085|pdb|4FME|E Chain E, Espg-Rab1-Arf6 Complex
Length = 171
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 114/170 (67%), Gaps = 14/170 (8%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 2 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 61
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 62 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 121
Query: 123 GL---KIVN-----EMASAAGLLCTVDPALATALASDKTDLDEDEHVLAC 164
L K+V+ E A + G+ P L T+ A + T++++ +A
Sbjct: 122 DLTTKKVVDYTTAKEFADSLGI-----PFLETS-AKNATNVEQSFMTMAA 165
>gi|288965976|gb|ADC79634.1| Ras family protein [Ditylenchus destructor]
Length = 211
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 94/124 (75%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ + +LFK+VL+G+ GVGKTC+V+RF G + QG TIGVDF +KT+ ++ +RIKLQIW
Sbjct: 5 DTFDYLFKIVLIGDMGVGKTCVVQRFKNGSYIEKQGTTIGVDFTMKTLIVDGKRIKLQIW 64
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DT GQERFR+ITQSYYRSA+ +IL YDI+C+ + + L W+ ++ ++A V ++L+G
Sbjct: 65 DTGGQERFRTITQSYYRSANGIILCYDITCRQSSESLHRWIDDVSKFAVPNVAKILIGTK 124
Query: 122 SGLK 125
+ L+
Sbjct: 125 ADLQ 128
>gi|7706563|ref|NP_057614.1| ras-related protein Rab-8B [Homo sapiens]
gi|383872868|ref|NP_001244884.1| ras-related protein Rab-8B [Macaca mulatta]
gi|332235867|ref|XP_003267126.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Nomascus
leucogenys]
gi|397515492|ref|XP_003827984.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Pan paniscus]
gi|402874511|ref|XP_003901079.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Papio anubis]
gi|13638434|sp|Q92930.2|RAB8B_HUMAN RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|7209512|dbj|BAA92249.1| RAB-8b protein [Homo sapiens]
gi|18088350|gb|AAH20654.1| RAB8B, member RAS oncogene family [Homo sapiens]
gi|57997184|emb|CAI46143.1| hypothetical protein [Homo sapiens]
gi|193785490|dbj|BAG50856.1| unnamed protein product [Homo sapiens]
gi|208967244|dbj|BAG73636.1| RAB8B, member RAS oncogene family [synthetic construct]
gi|312151528|gb|ADQ32276.1| RAB8B, member RAS oncogene family [synthetic construct]
gi|355692780|gb|EHH27383.1| Ras-related protein Rab-8B [Macaca mulatta]
gi|380784677|gb|AFE64214.1| ras-related protein Rab-8B [Macaca mulatta]
gi|383419143|gb|AFH32785.1| ras-related protein Rab-8B [Macaca mulatta]
gi|384947648|gb|AFI37429.1| ras-related protein Rab-8B [Macaca mulatta]
gi|410217818|gb|JAA06128.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410263584|gb|JAA19758.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410300636|gb|JAA28918.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410332985|gb|JAA35439.1| RAB8B, member RAS oncogene family [Pan troglodytes]
Length = 207
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ + +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEE 160
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D D R++ E GE A + + +LETS
Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGVGMLTRI 271
AK+S NVE+ F +A ++M KL K+ + G G +I
Sbjct: 152 AKSSANVEEAFFTLARDIMTKLNRKMNDSNSAGAGGPVKI 191
>gi|131848|sp|P22128.1|RAB8_DISOM RecName: Full=Ras-related protein Rab-8; AltName: Full=ORA2; Flags:
Precursor
gi|213119|gb|AAA49232.1| GTP-binding protein [Discopyge ommata]
Length = 210
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 108/160 (67%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+TVE++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++ VYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLA 163
+ +++ G +D + S K+ ++ +E +
Sbjct: 125 MNEKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFIT 164
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 8/86 (9%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKID-REDREIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D E R++ E GE A + + +LETS
Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNEKRQVSKERGEKLAIDYGIKFLETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKL 257
AK+S NVE+ F+ +A ++M KL +K+
Sbjct: 152 AKSSINVEEAFITLARDIMTKLNKKM 177
>gi|440902734|gb|ELR53487.1| Ras-related protein Rab-19 [Bos grunniens mutus]
Length = 217
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 94/123 (76%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK++L+G++ VGKTC+V+ F GV+ Q TIGVDF ++ +EI+ +++K+Q+W
Sbjct: 12 ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYMEAQQNTIGVDFTVRALEIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNK 131
Query: 122 SGL 124
L
Sbjct: 132 CDL 134
>gi|313221470|emb|CBY32219.1| unnamed protein product [Oikopleura dioica]
gi|313230502|emb|CBY18718.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF+ + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDTYSESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASESVNKLLVG 120
>gi|326935565|ref|XP_003213840.1| PREDICTED: nck-associated protein 1-like, partial [Meleagris
gallopavo]
Length = 1022
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 106/174 (60%), Gaps = 6/174 (3%)
Query: 375 AESYRKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCF 434
A + K R + + KK + + KPGAES RK R T MDKLH+ L EL
Sbjct: 633 ASTVSKARNKKTLKHPSKKGEPERG------KPGAESQRKDRTVTTNMDKLHLTLAELTL 686
Query: 435 AINYCTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYM 494
++N+ N V++ T P EYL HLE+RF++A+V M ++ T E+A+PSE+LA + AY+
Sbjct: 687 SLNHVPNFTVFEHTVTPAEYLSSHLEARFTKAIVAMACYSQATQEVARPSEVLAGLGAYI 746
Query: 495 NVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVS 548
+Q++ ++V +D R+ + LLQQTQ D+ GE+T+ +Y WY E LLR+ S
Sbjct: 747 TFIQSLTHFVGLDTARIIRSVLLQQTQPRDASGEQTLTTIYTNWYLEALLRQAS 800
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 76/106 (71%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + K AEKLTI++DRG G+L RIYNIKK C D K++PSFL DK++E +K I K
Sbjct: 1 MSLPSAYQNKFAEKLTILNDRGRGVLVRIYNIKKTCSDPKTRPSFLCDKAMEPSVKFINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPN+D++S + + + + DIV++L YYY+FVD+L F+D VY
Sbjct: 61 KFPNLDVRSSTQHLGPVHKDKGDIVRALGPYYYSFVDVLEFRDHVY 106
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 129 EMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACFY 185
E+ASAAG+ C +DPAL LA K D E+++ +ACLL+VFVAV +P LA + A Y
Sbjct: 959 ELASAAGIPCEIDPALVNVLAGSKMDGSPSEEDYKVACLLLVFVAVSLPLLASDPASVY 1017
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 34/45 (75%)
Query: 667 LSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
L + ++ AHEM H SD +F RLGQM+++Y+ P+KKL+EEF PH
Sbjct: 153 LLIGMYHCAHEMSHGASDSSFARLGQMVLEYDHPLKKLTEEFGPH 197
>gi|387849222|ref|NP_001248483.1| ras-related protein Rab-19 [Macaca mulatta]
gi|383418347|gb|AFH32387.1| ras-related protein Rab-19 [Macaca mulatta]
Length = 217
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 95/123 (77%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK++L+G++ VGKTC+V+ F GV+ Q TIGVDF +++++I+ +++K+Q+W
Sbjct: 12 ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNK 131
Query: 122 SGL 124
L
Sbjct: 132 CDL 134
>gi|168030217|ref|XP_001767620.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681149|gb|EDQ67579.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
Length = 203
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|195325951|ref|XP_002029694.1| GM25038 [Drosophila sechellia]
gi|194118637|gb|EDW40680.1| GM25038 [Drosophila sechellia]
Length = 219
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 102/165 (61%), Gaps = 1/165 (0%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E + FLFK+VL+G+ G GKTC+V RF G + G TIGVDF +KT+ + ++IKLQIW
Sbjct: 16 EHFDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIW 75
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ +++VYDI+ + +F L W+ E+ Y + VL +LVG
Sbjct: 76 DTAGQERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNK 135
Query: 122 SGLKIVNEMA-SAAGLLCTVDPALATALASDKTDLDEDEHVLACL 165
L+ E+ A +C P + + + + E CL
Sbjct: 136 CDLEEQREVDFEEARQMCQYIPEILFVMETSAKENMNVEDAFRCL 180
>gi|388521973|gb|AFK49048.1| unknown [Lotus japonicus]
Length = 212
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ ERIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGERIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LA+
Sbjct: 169 VFFSIARDIKQRLAD 183
>gi|159490336|ref|XP_001703135.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|2500073|sp|Q39571.1|YPTC1_CHLRE RecName: Full=GTP-binding protein YPTC1
gi|806724|gb|AAA82727.1| YptC1 [Chlamydomonas reinhardtii]
gi|78522571|gb|ABB46195.1| YptC1 [Chlamydomonas incerta]
gi|158270765|gb|EDO96600.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 203
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|78042536|ref|NP_001030212.1| ras-related protein Rab-19 [Bos taurus]
gi|109892951|sp|Q3ZC27.1|RAB19_BOVIN RecName: Full=Ras-related protein Rab-19
gi|73587379|gb|AAI02962.1| RAB19, member RAS oncogene family [Bos taurus]
gi|296488160|tpg|DAA30273.1| TPA: RAB19, member RAS oncogene family [Bos taurus]
Length = 217
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 94/123 (76%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK++L+G++ VGKTC+V+ F GV+ Q TIGVDF ++ +EI+ +++K+Q+W
Sbjct: 12 ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYMEAQQNTIGVDFTVRALEIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNK 131
Query: 122 SGL 124
L
Sbjct: 132 CDL 134
>gi|405966153|gb|EKC31469.1| Ras-related protein Rab-43 [Crassostrea gigas]
Length = 192
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 93/118 (78%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ + +LFK+VL+G+AGVGKTC+V+RF G + G+TIGVDF +KT++I+ + IKLQIW
Sbjct: 11 DTFDYLFKIVLIGDAGVGKTCVVQRFKSGTYVEKHGSTIGVDFTMKTLQIDGKLIKLQIW 70
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQERFR+ITQSYYRSA+ +I+ YDI+ + +F+ + W+ +++ YA +++ ++G
Sbjct: 71 DTAGQERFRTITQSYYRSANGVIIAYDITKKGSFESVPRWIEDVKRYAGPNIVQCIIG 128
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 194 NNIHCMARNKIDRED-REIPTEVGEDFAKRHDMY-YLETSAKASDNVEKLFMQIA 246
N + C+ NK D E RE+ + FA+ H M +ETSAK + N+E+LFM++A
Sbjct: 121 NIVQCIIGNKKDMEHLREVNLSEAKAFAQHHGMVDAIETSAKENTNIEELFMEMA 175
>gi|348522973|ref|XP_003448998.1| PREDICTED: ras-related protein Rab-1A-like [Oreochromis niloticus]
Length = 212
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 105/151 (69%), Gaps = 3/151 (1%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T++++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDMDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YA V R+LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEQESFNNVKQWLDEIDRYACENVSRLLVGNKS 123
Query: 123 GL--KIVNEMASAAGLLCTVD-PALATALAS 150
L K V + A+A L ++ P L T+ S
Sbjct: 124 DLVSKKVVDAATAQDLASSLKIPFLETSAKS 154
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 211 IPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
+ +D A + +LETSAK+SDNVE+ F+ +A+E+ ++LA +
Sbjct: 131 VDAATAQDLASSLKIPFLETSAKSSDNVERAFLTMASEIHKRLASE 176
>gi|410921404|ref|XP_003974173.1| PREDICTED: ras-related protein Rab-8A-like [Takifugu rubripes]
Length = 206
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 109/160 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLA 163
+ +++ G +D + S K +++ +E L
Sbjct: 125 VNDKRQVSKDRGEKLALDYGIKFMETSAKANINVEEAFLT 164
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK D D R++ + GE A + + ++ETSAKA+ NVE+ F+ +A ++ K+ +KL
Sbjct: 121 NKCDVNDKRQVSKDRGEKLALDYGIKFMETSAKANINVEEAFLTLARDIKAKMDKKLEGN 180
Query: 261 HDRGVGMLTRI 271
+ +G +I
Sbjct: 181 NPQGSSQGVKI 191
>gi|17737545|ref|NP_523970.1| Rab19, isoform A [Drosophila melanogaster]
gi|442630989|ref|NP_001261575.1| Rab19, isoform B [Drosophila melanogaster]
gi|194865952|ref|XP_001971685.1| GG14295 [Drosophila erecta]
gi|195491260|ref|XP_002093486.1| GE20724 [Drosophila yakuba]
gi|195588689|ref|XP_002084090.1| GD14074 [Drosophila simulans]
gi|2313047|dbj|BAA21712.1| rab-related protein 3 [Drosophila melanogaster]
gi|7295127|gb|AAF50452.1| Rab19, isoform A [Drosophila melanogaster]
gi|17945955|gb|AAL49022.1| RE48347p [Drosophila melanogaster]
gi|190653468|gb|EDV50711.1| GG14295 [Drosophila erecta]
gi|194179587|gb|EDW93198.1| GE20724 [Drosophila yakuba]
gi|194196099|gb|EDX09675.1| GD14074 [Drosophila simulans]
gi|220948860|gb|ACL86973.1| Rab-RP3-PA [synthetic construct]
gi|440215482|gb|AGB94270.1| Rab19, isoform B [Drosophila melanogaster]
Length = 219
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 102/165 (61%), Gaps = 1/165 (0%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E + FLFK+VL+G+ G GKTC+V RF G + G TIGVDF +KT+ + ++IKLQIW
Sbjct: 16 EHFDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIW 75
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ +++VYDI+ + +F L W+ E+ Y + VL +LVG
Sbjct: 76 DTAGQERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNK 135
Query: 122 SGLKIVNEMA-SAAGLLCTVDPALATALASDKTDLDEDEHVLACL 165
L+ E+ A +C P + + + + E CL
Sbjct: 136 CDLEEQREVDFEEARQMCQYIPEILFVMETSAKENMNVEDAFRCL 180
>gi|355783089|gb|EHH65010.1| hypothetical protein EGM_18349 [Macaca fascicularis]
Length = 205
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 102/143 (71%), Gaps = 8/143 (5%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 123 GL---KIVN-----EMASAAGLL 137
L K+V+ E A + G+L
Sbjct: 127 DLTTKKVVDYTTAKEFADSLGIL 149
>gi|281202863|gb|EFA77065.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 202
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+N + IKLQIWD
Sbjct: 4 DYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + TFD + WL+EI+ +A V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDRVTFDNVRQWLQEIDRFACESVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|385303857|gb|EIF47907.1| member ras oncogene family [Dekkera bruxellensis AWRI1499]
Length = 202
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFAENTYTQDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA+ V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNDVNQWLQEIDRYATSGVQKLLVG 120
>gi|224138704|ref|XP_002326669.1| predicted protein [Populus trichocarpa]
gi|222833991|gb|EEE72468.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF G + +TIGVDF I+TVE + + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADGSYLDSYISTIGVDFKIRTVEQDGKTMKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLSEIDRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|198426408|ref|XP_002122173.1| PREDICTED: similar to RAB43 protein [Ciona intestinalis]
Length = 210
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 93/121 (76%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E+Y FLFK++L+G+ GVGKTC+V+RF G++ Q +TIGVDF +K+ ++ + +KLQIW
Sbjct: 7 ENYDFLFKIILIGDPGVGKTCIVQRFKSGLWLESQSSTIGVDFCMKSCHVDGKIVKLQIW 66
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQ+YYRSA+ ++ +DI+ + +F LT W+ ++ +Y + VL++L+G
Sbjct: 67 DTAGQERFRTITQTYYRSANGVLCAFDITSESSFYNLTQWMEDVSKYCAGDVLKLLIGNK 126
Query: 122 S 122
S
Sbjct: 127 S 127
>gi|296210478|ref|XP_002751979.1| PREDICTED: ras-related protein Rab-19 [Callithrix jacchus]
Length = 217
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 118/192 (61%), Gaps = 23/192 (11%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK++L+G++ VGKTC+V+ F GV+ Q TIGVDF +++++I+ +++K+Q+W
Sbjct: 12 ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRWSTFESIPHWIHEIEKYGAANLVIMLIGNK 131
Query: 122 SGL--------KIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVC 173
L + +A GLL ++ + A + ++DE VFV +
Sbjct: 132 CDLWEKRHVLFEDACTLAEKYGLLAVLETS-----AKESKNIDE----------VFVLMA 176
Query: 174 IPKLARNEACFY 185
+ARN Y
Sbjct: 177 KELIARNSLHLY 188
>gi|339235645|ref|XP_003379377.1| GTP-binding protein Ypt2 [Trichinella spiralis]
gi|316977954|gb|EFV60990.1| GTP-binding protein Ypt2 [Trichinella spiralis]
Length = 189
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 93/118 (78%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ + +LFK+VL+G+ G+GKTC+V+RF G F QG+TIGVDF +KT+ ++ +R+KLQ+W
Sbjct: 7 DSFDYLFKIVLIGDMGIGKTCVVQRFKNGTFLERQGSTIGVDFTMKTLIVDGKRVKLQVW 66
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DT GQERFR+ITQSYYRSA+ +I+ YD++C+ +F + WL ++ ++A+ V+++LV
Sbjct: 67 DTGGQERFRTITQSYYRSANGIIICYDVTCRKSFKNVRRWLDDVLKFAAPNVVKLLVA 124
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 194 NNIHCMARNKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
N + + KID E DR + TE GE A+ M ++ETSAK + NV++ F +A +L
Sbjct: 117 NVVKLLVATKIDLENDRLVSTEEGEALAQAEQMNFIETSAKENLNVDQAFENLAKDLKPA 176
Query: 253 L 253
L
Sbjct: 177 L 177
>gi|145508820|ref|XP_001440354.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833819|emb|CAI39368.1| rab_A22 [Paramecium tetraurelia]
gi|124407571|emb|CAK72957.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 96/134 (71%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
++Y +LFK++L+GN+ VGK+ L+ RF VF TIGVDF I+T ++N + +KLQIW
Sbjct: 5 QEYDYLFKILLIGNSAVGKSSLLLRFADNVFNESFLPTIGVDFKIRTFDLNGKTVKLQIW 64
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERF++IT SYY+ AH +ILVYD++ + +F + +WL E+E+YA+ V+RVLVG
Sbjct: 65 DTAGQERFKTITNSYYKGAHGIILVYDVTDKQSFKDVENWLAEVEKYANENVVRVLVGNK 124
Query: 122 SGLKIVNEMASAAG 135
L+ E+ S G
Sbjct: 125 VDLESKREVTSEEG 138
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 185 YLASLEGHSNN--IHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+LA +E ++N + + NK+D E RE+ +E G++ A ++ ++ETSAK S NVEK
Sbjct: 104 WLAEVEKYANENVVRVLVGNKVDLESKREVTSEEGKELADSLNIRFIETSAKNSSNVEKA 163
Query: 242 FMQIAAELMEKLAE 255
F+ +A E+ K+A+
Sbjct: 164 FITLANEIKAKVAK 177
>gi|226486|prf||1515250A rab1B protein
Length = 201
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 93/122 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR++T SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTVTSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|320167737|gb|EFW44636.1| RAB1 [Capsaspora owczarzaki ATCC 30864]
Length = 205
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 93/122 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLQEIDRYASETVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|195399732|ref|XP_002058473.1| GJ14443 [Drosophila virilis]
gi|194142033|gb|EDW58441.1| GJ14443 [Drosophila virilis]
Length = 205
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 96/134 (71%), Gaps = 3/134 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD + Q +F+ + WL EIE YA V ++LVG S
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKS 126
Query: 123 GL---KIVNEMASA 133
L K+V+ +A
Sbjct: 127 DLTTKKVVDHTTAA 140
>gi|10129780|emb|CAC08198.1| putative GTP-binding protein [Kluyveromyces lactis]
Length = 206
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 94/123 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+GN+GVGK+CL+ RF+ + +TIGVDF IKTVE++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR +H +I+VYD++ + +F+ + WL+EI+ A+ VL++LVG
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDRESFNGVKMWLQEIDRIATSTVLKLLVGNKC 123
Query: 123 GLK 125
LK
Sbjct: 124 DLK 126
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 196 IHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
+ + NK D +D R + +V ++FA + M +LETSA S NVE F+ +A ++ E ++
Sbjct: 115 LKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMS 174
Query: 255 EK 256
++
Sbjct: 175 QQ 176
>gi|449458992|ref|XP_004147230.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
gi|449517559|ref|XP_004165813.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
Length = 202
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|195454241|ref|XP_002074152.1| GK12772 [Drosophila willistoni]
gi|194170237|gb|EDW85138.1| GK12772 [Drosophila willistoni]
Length = 205
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 96/134 (71%), Gaps = 3/134 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD + Q +F+ + WL EIE YA V ++LVG S
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKS 126
Query: 123 GL---KIVNEMASA 133
L K+V+ +A
Sbjct: 127 DLTTKKVVDHTTAA 140
>gi|195113911|ref|XP_002001511.1| GI10837 [Drosophila mojavensis]
gi|193918105|gb|EDW16972.1| GI10837 [Drosophila mojavensis]
Length = 205
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 96/134 (71%), Gaps = 3/134 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD + Q +F+ + WL EIE YA V ++LVG S
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKS 126
Query: 123 GL---KIVNEMASA 133
L K+V+ +A
Sbjct: 127 DLTTKKVVDHTTAA 140
>gi|384482285|pdb|3SFV|A Chain A, Crystal Structure Of The Gdp-Bound Rab1a S25n Mutant In
Complex With The Coiled-Coil Domain Of Lida From
Legionella Pneumophila
Length = 181
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 113/170 (66%), Gaps = 14/170 (8%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 12 EYDYLFKLLLIGDSGVGKNCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 71
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 72 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 131
Query: 123 GL---KIVN-----EMASAAGLLCTVDPALATALASDKTDLDEDEHVLAC 164
L K+V+ E A + G+ P L T+ A + T++++ +A
Sbjct: 132 DLTTKKVVDYTTAKEFADSLGI-----PFLETS-AKNATNVEQSFMTMAA 175
>gi|392935497|pdb|3TKL|A Chain A, Crystal Structure Of The Gtp-Bound Rab1a In Complex With
The Coiled- Coil Domain Of Lida From Legionella
Pneumophila
Length = 196
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 12 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 71
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 72 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 128
>gi|242037605|ref|XP_002466197.1| hypothetical protein SORBIDRAFT_01g003310 [Sorghum bicolor]
gi|241920051|gb|EER93195.1| hypothetical protein SORBIDRAFT_01g003310 [Sorghum bicolor]
Length = 214
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+TVE++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V +VLVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVG 127
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKVLVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQ 168
Query: 241 LFMQIAAELMEKLAEKLTIMHDRGV 265
+F IA ++ ++L+E + DR +
Sbjct: 169 VFFSIARDIKQRLSETDSKPEDRTI 193
>gi|206553|gb|AAA42006.1| ras protein [Rattus norvegicus]
Length = 205
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 108/158 (68%), Gaps = 13/158 (8%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 123 GL---KIVN-----EMASAAGLLCTVDPALATALASDK 152
L K+V+ E A + G+ P L T+ ++K
Sbjct: 127 DLTTKKVVDYTTAKEFADSLGI-----PFLETSAKNEK 159
>gi|197127906|gb|ACH44404.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
>gi|194741692|ref|XP_001953321.1| GF17263 [Drosophila ananassae]
gi|190626380|gb|EDV41904.1| GF17263 [Drosophila ananassae]
Length = 205
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 96/134 (71%), Gaps = 3/134 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD + Q +F+ + WL EIE YA V ++LVG S
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKS 126
Query: 123 GL---KIVNEMASA 133
L K+V+ +A
Sbjct: 127 DLTTKKVVDHTTAA 140
>gi|24648682|ref|NP_732610.1| Rab1 [Drosophila melanogaster]
gi|194899532|ref|XP_001979313.1| GG14761 [Drosophila erecta]
gi|195355524|ref|XP_002044241.1| GM15089 [Drosophila sechellia]
gi|195498456|ref|XP_002096531.1| Rab1 [Drosophila yakuba]
gi|195569217|ref|XP_002102607.1| GD19996 [Drosophila simulans]
gi|2313033|dbj|BAA21705.1| rab1 [Drosophila melanogaster]
gi|7300727|gb|AAF55873.1| Rab1 [Drosophila melanogaster]
gi|190651016|gb|EDV48271.1| GG14761 [Drosophila erecta]
gi|194129542|gb|EDW51585.1| GM15089 [Drosophila sechellia]
gi|194182632|gb|EDW96243.1| Rab1 [Drosophila yakuba]
gi|194198534|gb|EDX12110.1| GD19996 [Drosophila simulans]
gi|209417952|gb|ACI46514.1| FI01544p [Drosophila melanogaster]
Length = 205
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 96/134 (71%), Gaps = 3/134 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD + Q +F+ + WL EIE YA V ++LVG S
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKS 126
Query: 123 GL---KIVNEMASA 133
L K+V+ +A
Sbjct: 127 DLTTKKVVDHTTAA 140
>gi|66818911|ref|XP_643115.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|134236|sp|P20791.1|RAB8B_DICDI RecName: Full=Ras-related protein Rab-8B; AltName: Full=GTP-binding
protein SAS2
gi|167875|gb|AAA33248.1| GTP-binding protein SAS2 [Dictyostelium discoideum]
gi|60471190|gb|EAL69153.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 203
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 91/116 (78%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y FL K++L+G++GVGK+CL+ RF+ G F P ATIG+DF I+T+E+ +RIKLQIWDT
Sbjct: 12 YDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDT 71
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYD++ + +F + +W+R IE++AS V ++L+G
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIG 127
>gi|410953063|ref|XP_003983195.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-19 [Felis
catus]
Length = 234
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 93/117 (79%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK++L+G++ VGKTC+V+ F GV+ Q TIGVDF ++++EI+ +++K+Q+W
Sbjct: 12 ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLEIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLV 118
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + ++ +L+
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLI 128
>gi|1370196|emb|CAA98175.1| RAB8D [Lotus japonicus]
Length = 214
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +R+KLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRVKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +WLR IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWLRNIEQHASDNVNKILVG 127
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
Query: 180 NEACF-----YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLET 230
+EA F +L ++E H S+N++ + NK D ++ R +PT G+ A + + + ET
Sbjct: 99 DEASFNNIRNWLRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFET 158
Query: 231 SAKASDNVEKLFMQIAAELMEKLAE 255
SAK + NVE++F IA ++ ++LA+
Sbjct: 159 SAKTNLNVEEVFFSIARDIKQRLAD 183
>gi|125773595|ref|XP_001358056.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|195166166|ref|XP_002023906.1| GL27164 [Drosophila persimilis]
gi|54637791|gb|EAL27193.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|194106066|gb|EDW28109.1| GL27164 [Drosophila persimilis]
Length = 205
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 96/134 (71%), Gaps = 3/134 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD + Q +F+ + WL EIE YA V ++LVG S
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKS 126
Query: 123 GL---KIVNEMASA 133
L K+V+ +A
Sbjct: 127 DLTTKKVVDHTTAA 140
>gi|156366235|ref|XP_001627045.1| predicted protein [Nematostella vectensis]
gi|156213942|gb|EDO34945.1| predicted protein [Nematostella vectensis]
Length = 208
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 109/165 (66%), Gaps = 3/165 (1%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E + +LFK+VL+G+ GVGKTC+V+RF G F G+TIGVDF +++V+++N++IKLQIW
Sbjct: 8 EFFDYLFKIVLIGDPGVGKTCIVQRFRSGTFVERNGSTIGVDFTMRSVQVDNKKIKLQIW 67
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRS + +I+ YDI+ TF + W ++++YA +++LVG
Sbjct: 68 DTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYAPENAIKLLVGNK 127
Query: 122 SGLKIVNEMASAAGLLCTVDPALATAL---ASDKTDLDEDEHVLA 163
L+ E++ + C + L A D T+++ + LA
Sbjct: 128 KDLEREREVSLEDAVNCASHYGMLDVLETSAKDATNIEAAFYRLA 172
>gi|449460967|ref|XP_004148215.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
gi|449528087|ref|XP_004171038.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
Length = 216
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V +VLVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVG 127
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKVLVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F I ++ ++LA+
Sbjct: 169 VFFSIGRDIKQRLAD 183
>gi|88193099|pdb|2FOL|A Chain A, Crystal Structure Of Human Rab1a In Complex With Gdp
Length = 191
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 114/170 (67%), Gaps = 14/170 (8%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 21 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 80
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 81 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 140
Query: 123 GL---KIVN-----EMASAAGLLCTVDPALATALASDKTDLDEDEHVLAC 164
L K+V+ E A + G+ P L T+ A + T++++ +A
Sbjct: 141 DLTTKKVVDYTTAKEFADSLGI-----PFLETS-AKNATNVEQSFMTMAA 184
>gi|350538481|ref|NP_001233833.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053067|gb|AAA80680.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYDI+ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDQESFNNVKQWLSEIDRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|357123970|ref|XP_003563680.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+TVE++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V +VLVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVG 127
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKVLVGNKADMDESKRAVPTSKGQALADEYGITFFETSAKTNLNVEQ 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++L+E
Sbjct: 169 VFFSIARDIKQRLSE 183
>gi|7643790|gb|AAF65510.1| small GTP-binding protein [Capsicum annuum]
Length = 203
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYDI+ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDQESFNNVKQWLSEIDRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|317418815|emb|CBN80853.1| Nck-associated protein 1 [Dicentrarchus labrax]
Length = 1123
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 110/188 (58%), Gaps = 8/188 (4%)
Query: 367 LNEIIKPG--AESYRKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDK 424
LN+ ++P AE+ R Q KK + K+ KPGAES RK R +T +DK
Sbjct: 619 LNDQLQPKHCAETISAARHRKQKKPVPKKGEVQKE------KPGAESLRKDRSVVTNVDK 672
Query: 425 LHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPS 484
+H+ LTELC + C++ V+D P E+L HLE R S +V M +N T EIA+PS
Sbjct: 673 MHLMLTELCTCFSLCSDFIVFDHIIVPTEFLLSHLEIRLSEIIVRMANYNQTTQEIARPS 732
Query: 485 ELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLL 544
+LL +RAY L ++ Y+++D+TR+ + LLQQTQ +DS G T+ LY WY E LL
Sbjct: 733 DLLTKLRAYTASLHSLSGYINVDVTRLVKSVLLQQTQPLDSRGGPTMTTLYTNWYLESLL 792
Query: 545 RRVSETQV 552
R+ S + +
Sbjct: 793 RQASNSLI 800
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 82/137 (59%), Gaps = 10/137 (7%)
Query: 540 SEVLLRRVSETQV-----KSLNLLNFLRVYT-----VENYVHIDMTRVFNNALLQQTQRM 589
SE+++R + Q + +LL LR YT + Y+++D+TR+ + LLQQTQ +
Sbjct: 712 SEIIVRMANYNQTTQEIARPSDLLTKLRAYTASLHSLSGYINVDVTRLVKSVLLQQTQPL 771
Query: 590 DSHGEKTVAALYIQWYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNEL 649
DS G T+ LY WY E LLR+ S I FV+ T + F AEEFSD++EL
Sbjct: 772 DSRGGPTMTTLYTNWYLESLLRQASNSLIVHCPTMHCFVNQTTDNDPSFRAEEFSDISEL 831
Query: 650 RALADLIGPYGMKLLNE 666
+ALA+LIGPYG+K L+E
Sbjct: 832 QALAELIGPYGLKFLSE 848
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 73/98 (74%), Gaps = 4/98 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNID-- 308
+KLAEKL+I+++RG G+L R+ IKK C D K +PSFL+DK++ES IK I KKFPNID
Sbjct: 5 QKLAEKLSILNERGNGVLIRMNYIKKICADPKLRPSFLTDKAMESAIKYINKKFPNIDFR 64
Query: 309 --IKSVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
I+ ++ I + +S+++ + + YY +F+D++ F+D VY
Sbjct: 65 GNIQHLTSIQRQKSEVLAATASYYDSFLDVIEFRDHVY 102
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 9/113 (7%)
Query: 96 DCLTDWLREIEEY--ASFKVLRVLVGGTSGLKI---VNEMASAAGLLCTVDPALATALA- 149
DCL D L + Y + LR + +K+ + E+ASAAG C +DP L TA+A
Sbjct: 917 DCLKDILLKHCPYLMGPIECLRDFISPEDDIKVTLSIFELASAAGYTCDIDPTLVTAIAN 976
Query: 150 --SDKTDLDEDEHVLACLLMVFVAVCIPKLARNEACFYLASLEGHSNNIHCMA 200
+D T +DE E+ L+CLL+ ++AV +P LA + Y GH+NNIHC+A
Sbjct: 977 MQTDNTSVDE-EYKLSCLLLAYIAVSLPTLALDPNSLYSREHGGHNNNIHCLA 1028
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
FN AHEM + SD ++PRLGQM ++YE P KKL+EEF PH
Sbjct: 154 FNCAHEMSNGSSDPSYPRLGQMFVEYEHPWKKLTEEFGPH 193
>gi|270346387|pdb|2WWX|A Chain A, Crystal Structure Of The SidmDRRA(GEFGDF DOMAIN)-Rab1
(Gtpase Domain) Complex
Length = 175
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 120
>gi|449440016|ref|XP_004137781.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
Length = 216
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++L++
Sbjct: 169 VFFSIAKDIKQRLSD 183
>gi|115456231|ref|NP_001051716.1| Os03g0819900 [Oryza sativa Japonica Group]
gi|29124128|gb|AAO65869.1| ethylene-responsive small GTP-binding protein [Oryza sativa
Japonica Group]
gi|46392555|gb|AAS91045.1| small GTP-binding protein [Oryza sativa Japonica Group]
gi|108711784|gb|ABF99579.1| Ras-related protein ARA-3, putative, expressed [Oryza sativa
Japonica Group]
gi|113550187|dbj|BAF13630.1| Os03g0819900 [Oryza sativa Japonica Group]
gi|215767248|dbj|BAG99476.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767292|dbj|BAG99520.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193994|gb|EEC76421.1| hypothetical protein OsI_14091 [Oryza sativa Indica Group]
gi|222626056|gb|EEE60188.1| hypothetical protein OsJ_13134 [Oryza sativa Japonica Group]
Length = 214
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+TVE++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQ 168
Query: 241 LFMQIAAELMEKLAEKLTIMHDRGV 265
+F IA ++ ++L+E + DR +
Sbjct: 169 VFFSIARDIKQRLSETDSKPEDRTI 193
>gi|384247689|gb|EIE21175.1| GTP-binding protein YPTC1 [Coccomyxa subellipsoidea C-169]
Length = 202
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YA+ V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYANENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|348538098|ref|XP_003456529.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 202
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 120
>gi|115434888|ref|NP_001042202.1| Os01g0179700 [Oryza sativa Japonica Group]
gi|113531733|dbj|BAF04116.1| Os01g0179700 [Oryza sativa Japonica Group]
gi|125524668|gb|EAY72782.1| hypothetical protein OsI_00645 [Oryza sativa Indica Group]
gi|125569264|gb|EAZ10779.1| hypothetical protein OsJ_00614 [Oryza sativa Japonica Group]
gi|215697672|dbj|BAG91666.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765495|dbj|BAG87192.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|162458854|ref|NP_001105441.1| GTP-binding protein YPTM2 [Zea mays]
gi|466172|sp|Q05737.1|YPTM2_MAIZE RecName: Full=GTP-binding protein YPTM2
gi|287835|emb|CAA44919.1| yptm2 [Zea mays]
Length = 203
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|304598|gb|AAC37385.1| Rab1A [Dictyostelium discoideum]
gi|739974|prf||2004272A rab1A gene
Length = 167
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+N + IKLQIWD
Sbjct: 4 DYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + TF+ + WL+EI+ +A V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|410917514|ref|XP_003972231.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
Length = 202
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 120
>gi|308081088|ref|NP_001183566.1| uncharacterized protein LOC100502159 [Zea mays]
gi|194700886|gb|ACF84527.1| unknown [Zea mays]
gi|238013122|gb|ACR37596.1| unknown [Zea mays]
gi|413923310|gb|AFW63242.1| hypothetical protein ZEAMMB73_436511 [Zea mays]
gi|413938043|gb|AFW72594.1| hypothetical protein ZEAMMB73_730860 [Zea mays]
Length = 203
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|387914198|gb|AFK10708.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392881360|gb|AFM89512.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392884280|gb|AFM90972.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
>gi|217071576|gb|ACJ84148.1| unknown [Medicago truncatula]
Length = 163
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVG 127
>gi|242066528|ref|XP_002454553.1| hypothetical protein SORBIDRAFT_04g033160 [Sorghum bicolor]
gi|194691170|gb|ACF79669.1| unknown [Zea mays]
gi|219887101|gb|ACL53925.1| unknown [Zea mays]
gi|241934384|gb|EES07529.1| hypothetical protein SORBIDRAFT_04g033160 [Sorghum bicolor]
gi|413938047|gb|AFW72598.1| GTP-binding protein YPTM2 isoform 1 [Zea mays]
gi|413938048|gb|AFW72599.1| GTP-binding protein YPTM2 isoform 2 [Zea mays]
Length = 203
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 193 SNNIH-CMARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELM 250
S+N++ + NK D ++ + TE + FA + ++ETSAK + NVE+ FM +AA +
Sbjct: 111 SDNVNKLLVGNKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIK 170
Query: 251 EKLAEKLTIMHDRGVGMLTR--IYNIKKAC 278
+++A + + R + R N K +C
Sbjct: 171 DRMASQPAAANARPATVQIRGQPVNQKTSC 200
>gi|194387238|dbj|BAG59983.1| unnamed protein product [Homo sapiens]
Length = 190
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 107/157 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF + F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFPEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEH 160
+ +++ G +D + S K+ + +E+
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEN 161
>gi|195053856|ref|XP_001993842.1| GH18937 [Drosophila grimshawi]
gi|193895712|gb|EDV94578.1| GH18937 [Drosophila grimshawi]
Length = 205
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 96/134 (71%), Gaps = 3/134 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD + Q +F+ + WL EIE YA V ++LVG S
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKS 126
Query: 123 GL---KIVNEMASA 133
L K+V+ +A
Sbjct: 127 DLTTKKVVDHTIAA 140
>gi|297599697|ref|NP_001047606.2| Os02g0653800 [Oryza sativa Japonica Group]
gi|14140133|emb|CAC39050.1| putative GTP-binding protein [Oryza sativa]
gi|49387522|dbj|BAD24987.1| putative GTP-binding protein YPTM2 [Oryza sativa Japonica Group]
gi|215769313|dbj|BAH01542.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623360|gb|EEE57492.1| hypothetical protein OsJ_07768 [Oryza sativa Japonica Group]
gi|255671140|dbj|BAF09520.2| Os02g0653800 [Oryza sativa Japonica Group]
Length = 203
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|449483368|ref|XP_004156569.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
Length = 221
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 48/80 (60%), Gaps = 9/80 (11%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDREDRE-------IPTEVGEDFAKRHDMYYLETSAKAS 235
++ ++E H S+N++ + NK D ++ + +PT G+ A + + + ETSAK +
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRVRTFSSVPTSKGQALADEYGIKFFETSAKTN 168
Query: 236 DNVEKLFMQIAAELMEKLAE 255
NVE++F IA ++ ++L++
Sbjct: 169 LNVEEVFFSIAKDIKQRLSD 188
>gi|240849285|ref|NP_001155334.1| ras-related protein Rab-1A [Ovis aries]
gi|238566736|gb|ACR46625.1| RAB1A [Ovis aries]
Length = 204
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 114/169 (67%), Gaps = 14/169 (8%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 123 GL---KIVN-----EMASAAGLLCTVDPALATALASDKTDLDEDEHVLA 163
L K+V+ E A + G+ P L T+ A + T++++ +A
Sbjct: 127 DLTTKKVVDYTTAKEFADSLGI-----PFLETS-AKNATNVEQSFMTMA 169
>gi|226528571|ref|NP_001140371.1| ras-related protein ARA-3 [Zea mays]
gi|194699210|gb|ACF83689.1| unknown [Zea mays]
gi|194703022|gb|ACF85595.1| unknown [Zea mays]
gi|195606220|gb|ACG24940.1| ras-related protein ARA-3 [Zea mays]
gi|195657805|gb|ACG48370.1| ras-related protein ARA-3 [Zea mays]
gi|238005634|gb|ACR33852.1| unknown [Zea mays]
gi|414873636|tpg|DAA52193.1| TPA: Ras protein ARA-3 isoform 1 [Zea mays]
gi|414873637|tpg|DAA52194.1| TPA: Ras protein ARA-3 isoform 2 [Zea mays]
Length = 215
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+TVE++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQ 168
Query: 241 LFMQIAAELMEKLAEKLTIMHDRGV 265
+F IA ++ ++L+E + DR +
Sbjct: 169 VFFSIARDIKQRLSETDSKPEDRTI 193
>gi|71019499|ref|XP_759980.1| GTP-binding protein Ypt1 [Ustilago maydis 521]
gi|46099486|gb|EAK84719.1| YPT1_NEUCR GTP-binding protein ypt1 [Ustilago maydis 521]
Length = 208
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 95/133 (71%), Gaps = 2/133 (1%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 7 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ TF + WL+EI+ YA V ++LVG S
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQWLQEIDRYACEGVNKLLVGNKS 126
Query: 123 GL--KIVNEMASA 133
L K V E A+A
Sbjct: 127 DLTNKKVVEYATA 139
>gi|387017956|gb|AFJ51096.1| ras-related protein Rab-1A [Crotalus adamanteus]
Length = 205
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
>gi|218199351|gb|EEC81778.1| hypothetical protein OsI_25471 [Oryza sativa Indica Group]
Length = 215
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 60/106 (56%), Gaps = 11/106 (10%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQ 168
Query: 241 LFMQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPS 286
+F IA ++ ++LAE + DR + I K GDA++ S
Sbjct: 169 VFFSIARDIKQRLAETDSKTEDRTI-------KINKPEGDAEATTS 207
>gi|206725460|ref|NP_001128655.1| RAB1A, member RAS oncogene family [Taeniopygia guttata]
gi|397529551|ref|NP_001257591.1| ras-related protein Rab-1A [Gallus gallus]
gi|345329074|ref|XP_001513393.2| PREDICTED: ras-related protein Rab-1A-like [Ornithorhynchus
anatinus]
gi|197127903|gb|ACH44401.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197127905|gb|ACH44403.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
>gi|15231847|ref|NP_190929.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|30693873|ref|NP_850696.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|145332825|ref|NP_001078278.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|297820096|ref|XP_002877931.1| ATRAB8 [Arabidopsis lyrata subsp. lyrata]
gi|75098184|sp|O24466.1|RAE1A_ARATH RecName: Full=Ras-related protein RABE1a; Short=AtRABE1a; AltName:
Full=Ras-related protein Rab8B; Short=AtRab8B
gi|2289961|gb|AAB65088.1| AtRAB8 [Arabidopsis thaliana]
gi|6729512|emb|CAB67668.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|21555222|gb|AAM63807.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|28466873|gb|AAO44045.1| At3g53610 [Arabidopsis thaliana]
gi|110736141|dbj|BAF00042.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|110740068|dbj|BAF01936.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|297323769|gb|EFH54190.1| ATRAB8 [Arabidopsis lyrata subsp. lyrata]
gi|332645595|gb|AEE79116.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|332645596|gb|AEE79117.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|332645597|gb|AEE79118.1| RAB GTPase-8 [Arabidopsis thaliana]
Length = 216
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVG 127
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 185 YLASLEGHS----NNIHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H+ N I + +D R +P G+ A + M + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDSVNKILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LA+
Sbjct: 169 VFFSIAKDIKQRLAD 183
>gi|154550427|gb|ABS83488.1| RAB1 [Haliotis cracherodii]
Length = 140
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
>gi|392875748|gb|AFM86706.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYGYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
>gi|348500156|ref|XP_003437639.1| PREDICTED: ras-related protein Rab-8B-like [Oreochromis niloticus]
Length = 206
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 108/156 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMVLGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ ++ +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSINVEE 160
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK D D R++ E GE A + + +LETSAK+S NVE+ F +A ++M +L K+
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEGFYTLARDIMARLNRKMNDN 180
Query: 261 HDRGVGMLTRI 271
+ G G +I
Sbjct: 181 NPSGGGGPVKI 191
>gi|260804583|ref|XP_002597167.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
gi|229282430|gb|EEN53179.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
Length = 204
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA V ++LVG S
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKS 126
Query: 123 GL 124
L
Sbjct: 127 DL 128
>gi|147905945|ref|NP_001087181.1| RAB8B, member RAS oncogene family [Xenopus laevis]
gi|50604253|gb|AAH78133.1| Rab8b-prov protein [Xenopus laevis]
Length = 207
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 108/156 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +F+ + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ ++ +E
Sbjct: 125 MNDKRQVSREKGEKLAIDYGIKFLETSAKSSINVEE 160
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D D R++ E GE A + + +LETS
Sbjct: 92 NEKSFENIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSREKGEKLAIDYGIKFLETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKL 257
AK+S NVE+ F +A ++M KL K+
Sbjct: 152 AKSSINVEEGFFTLARDIMTKLNRKM 177
>gi|226492757|ref|NP_001141136.1| Ras protein ARA-3 isoform 1 [Zea mays]
gi|194702826|gb|ACF85497.1| unknown [Zea mays]
gi|195605484|gb|ACG24572.1| ras-related protein ARA-3 [Zea mays]
gi|413932610|gb|AFW67161.1| Ras protein ARA-3 isoform 1 [Zea mays]
gi|413932611|gb|AFW67162.1| Ras protein ARA-3 isoform 2 [Zea mays]
Length = 214
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+TVE++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQ 168
Query: 241 LFMQIAAELMEKLAEKLTIMHDRGV 265
+F IA ++ ++L+E + DR +
Sbjct: 169 VFFSIARDIKQRLSETDSKPEDRTI 193
>gi|388855810|emb|CCF50594.1| probable GTP-binding protein ypt1 [Ustilago hordei]
Length = 208
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 95/133 (71%), Gaps = 2/133 (1%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 7 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ TF + WL+EI+ YA V ++LVG S
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQWLQEIDRYACEGVNKLLVGNKS 126
Query: 123 GL--KIVNEMASA 133
L K V E A+A
Sbjct: 127 DLTNKKVVEYATA 139
>gi|325180634|emb|CCA15039.1| Rab1 family GTPase putative [Albugo laibachii Nc14]
Length = 202
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 87/123 (70%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+DY LFK+VL+G++GVGK+CL+ RF F TIGVDF +TV I+ + IKLQIW
Sbjct: 3 KDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTESYITTIGVDFRFRTVRIDKKTIKLQIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+IT +YYR A +I+VYD++ Q +FD + DWL E+ YAS ++LVG
Sbjct: 63 DTAGQERFRTITSAYYRGADGIIMVYDVTNQESFDHVNDWLNEVNRYASEGTCKLLVGNK 122
Query: 122 SGL 124
S +
Sbjct: 123 SDI 125
>gi|330845485|ref|XP_003294614.1| Rab GTPase [Dictyostelium purpureum]
gi|325074885|gb|EGC28854.1| Rab GTPase [Dictyostelium purpureum]
Length = 202
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+N + IKLQIWD
Sbjct: 4 DYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + TF+ + WL+EI+ +A V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|297796937|ref|XP_002866353.1| hypothetical protein ARALYDRAFT_496120 [Arabidopsis lyrata subsp.
lyrata]
gi|297312188|gb|EFH42612.1| hypothetical protein ARALYDRAFT_496120 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +P G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LA+
Sbjct: 169 VFFSIAKDIKQRLAD 183
>gi|383859431|ref|XP_003705198.1| PREDICTED: uncharacterized protein LOC100882595 [Megachile
rotundata]
Length = 1878
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 90/124 (72%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T++++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD + Q TF+ + WL EI+ YA V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKC 126
Query: 123 GLKI 126
L I
Sbjct: 127 DLHI 130
>gi|871510|emb|CAA90080.1| small GTP-binding protein [Pisum sativum]
Length = 216
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVG 127
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NV++
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVDE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LAE
Sbjct: 169 VFFSIARDIKQRLAE 183
>gi|417408915|gb|JAA50989.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 237
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 39 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 98
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 99 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 155
>gi|357440489|ref|XP_003590522.1| Ras-like protein [Medicago truncatula]
gi|355479570|gb|AES60773.1| Ras-like protein [Medicago truncatula]
gi|388512621|gb|AFK44372.1| unknown [Medicago truncatula]
Length = 216
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVG 127
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NV++
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVDE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LAE
Sbjct: 169 VFFSIARDIKQRLAE 183
>gi|388506692|gb|AFK41412.1| unknown [Medicago truncatula]
Length = 202
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 202 NKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
NK D D+++ +E + FA + ++ETSAK + NVE+ FM +AAE+ ++A +
Sbjct: 121 NKSDLSDKKVVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEIKNRMASQ 176
>gi|357440493|ref|XP_003590524.1| Ras-like protein [Medicago truncatula]
gi|355479572|gb|AES60775.1| Ras-like protein [Medicago truncatula]
Length = 216
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVG 127
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LAE
Sbjct: 169 VFFSIARDIKQRLAE 183
>gi|225449603|ref|XP_002284071.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|296086273|emb|CBI31714.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V +VLVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVG 127
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKVLVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LAE
Sbjct: 169 VFFSIAKDIKQRLAE 183
>gi|115471321|ref|NP_001059259.1| Os07g0239400 [Oryza sativa Japonica Group]
gi|33146687|dbj|BAC80082.1| putative ethylene-responsive small GTP-binding protein [Oryza
sativa Japonica Group]
gi|50510010|dbj|BAD30623.1| putative ethylene-responsive small GTP-binding protein [Oryza
sativa Japonica Group]
gi|113610795|dbj|BAF21173.1| Os07g0239400 [Oryza sativa Japonica Group]
gi|215696996|dbj|BAG90990.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636727|gb|EEE66859.1| hypothetical protein OsJ_23656 [Oryza sativa Japonica Group]
Length = 215
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 59/103 (57%), Gaps = 11/103 (10%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQ 168
Query: 241 LFMQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKS 283
+F IA ++ ++LAE + DR + I K GDA++
Sbjct: 169 VFFSIARDIKQRLAETDSKTEDRTI-------KINKPEGDAEA 204
>gi|298712336|emb|CBJ33128.1| Rab1A, RAB family GTPase [Ectocarpus siliculosus]
Length = 202
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 93/132 (70%), Gaps = 2/132 (1%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY LFK+VL+G++GVGK+CL+ RF F +TIGVDF +TV+I+ + +KLQIWD
Sbjct: 5 DYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWD 64
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT +YYR A +I+VYD++ Q +FD + DWL E+ YAS ++L+G S
Sbjct: 65 TAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKS 124
Query: 123 GL--KIVNEMAS 132
K+V+ A+
Sbjct: 125 DREDKVVDSAAA 136
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 35/49 (71%)
Query: 202 NKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELM 250
NK DRED+ + + +++A+ + +LETSAK + NVE+ F+ +A+EL+
Sbjct: 122 NKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELI 170
>gi|297842904|ref|XP_002889333.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
gi|297335175|gb|EFH65592.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
Length = 203
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF+ + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLSEIDRYASDNVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 193 SNNIH-CMARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELM 250
S+N++ + NK D E+R++P E + FA + ++ETSAK + NVE+ FM ++A +
Sbjct: 111 SDNVNKLLVGNKSDLTENRDVPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIK 170
Query: 251 EKLAEK 256
E++A +
Sbjct: 171 ERMASQ 176
>gi|388506566|gb|AFK41349.1| unknown [Medicago truncatula]
Length = 214
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
Query: 180 NEACF-----YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLET 230
+EA F ++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ET
Sbjct: 99 DEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFET 158
Query: 231 SAKASDNVEKLFMQIAAELMEKLAE 255
SAK + NVE++F IA ++ ++LA+
Sbjct: 159 SAKTNLNVEEVFFSIARDIKQRLAD 183
>gi|388506382|gb|AFK41257.1| unknown [Lotus japonicus]
Length = 216
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 12 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 71
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 72 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIKNWIRNIEQHASDNVNKILVG 128
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
Query: 180 NEACF-----YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLET 230
+EA F ++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ET
Sbjct: 100 DEASFNNIKNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFET 159
Query: 231 SAKASDNVEKLFMQIAAELMEKLAE 255
SAK + NVE++F IA ++ +KLA+
Sbjct: 160 SAKTNLNVEEVFFSIARDIKQKLAD 184
>gi|388499200|gb|AFK37666.1| unknown [Lotus japonicus]
Length = 216
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVG 127
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NV++
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVDE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ +++A+
Sbjct: 169 VFFSIARDIKQRVAD 183
>gi|296471468|tpg|DAA13583.1| TPA: ras-related protein Rab-1B [Bos taurus]
Length = 197
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|18447915|dbj|BAB84323.1| ras-related protein RAB8-2 [Nicotiana tabacum]
gi|18447919|dbj|BAB84325.1| ras-related protein RAB8-4 [Nicotiana tabacum]
Length = 216
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++L+E
Sbjct: 169 VFFSIARDIKQRLSE 183
>gi|221220558|gb|ACM08940.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 120
>gi|194752067|ref|XP_001958344.1| GF10872 [Drosophila ananassae]
gi|190625626|gb|EDV41150.1| GF10872 [Drosophila ananassae]
Length = 219
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 89/123 (72%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ FLFK+VL+G+ G GKTC+V RF G + G TIGVDF +KT+ + ++IKLQIW
Sbjct: 16 ENFDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIW 75
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ +++VYDI+ + +F L W+ E+ Y + VL +LVG
Sbjct: 76 DTAGQERFRTITQSYYRSANGVLIVYDITKRSSFANLQKWIEEVRRYTASNVLIILVGNK 135
Query: 122 SGL 124
L
Sbjct: 136 CDL 138
>gi|15238542|ref|NP_200792.1| Ras-related protein Rab-8A [Arabidopsis thaliana]
gi|9757904|dbj|BAB08351.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|28393504|gb|AAO42173.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|28973447|gb|AAO64048.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|332009857|gb|AED97240.1| Ras-related protein Rab-8A [Arabidopsis thaliana]
Length = 216
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +P G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LA+
Sbjct: 169 VFFSIAKDIKQRLAD 183
>gi|198415359|ref|XP_002126732.1| PREDICTED: similar to Ras-related protein ORAB-1 [Ciona
intestinalis]
Length = 204
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 6 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 65
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 66 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 122
>gi|1370190|emb|CAA98172.1| RAB8A [Lotus japonicus]
Length = 216
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 12 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 71
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 72 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIKNWIRNIEQHASDNVNKILVG 128
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
Query: 180 NEACF-----YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLET 230
+EA F ++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ET
Sbjct: 100 DEASFNNIKNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFET 159
Query: 231 SAKASDNVEKLFMQIAAELMEKLAE 255
SAK + NVE++F IA ++ ++LA+
Sbjct: 160 SAKTNLNVEEVFFSIARDIKQRLAD 184
>gi|131785|sp|P22125.1|RAB1_DISOM RecName: Full=Ras-related protein ORAB-1
gi|213123|gb|AAA49234.1| GTP-binding protein [Discopyge ommata]
Length = 202
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 120
>gi|444726573|gb|ELW67098.1| Ras-related protein Rab-8A [Tupaia chinensis]
Length = 229
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
>gi|54695924|gb|AAV38334.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|61365844|gb|AAX42772.1| RAB1A member RAS oncogene family [synthetic construct]
Length = 206
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
>gi|4758988|ref|NP_004152.1| ras-related protein Rab-1A isoform 1 [Homo sapiens]
gi|6679587|ref|NP_033022.1| ras-related protein Rab-1A [Mus musculus]
gi|45433570|ref|NP_112352.2| ras-related protein Rab-1A [Rattus norvegicus]
gi|55741705|ref|NP_001003153.1| ras-related protein Rab-1A [Canis lupus familiaris]
gi|381140057|ref|NP_001244201.1| RAB1A, member RAS oncogene family [Macaca mulatta]
gi|149727528|ref|XP_001493347.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Equus
caballus]
gi|291386694|ref|XP_002709883.1| PREDICTED: RAB1A, member RAS oncogene family isoform 1 [Oryctolagus
cuniculus]
gi|296223703|ref|XP_002757737.1| PREDICTED: ras-related protein Rab-1A-like [Callithrix jacchus]
gi|301784597|ref|XP_002927708.1| PREDICTED: ras-related protein Rab-1A-like [Ailuropoda melanoleuca]
gi|332813296|ref|XP_530454.3| PREDICTED: ras-related protein Rab-1A isoform 3 [Pan troglodytes]
gi|344283860|ref|XP_003413689.1| PREDICTED: ras-related protein Rab-1A-like [Loxodonta africana]
gi|348563536|ref|XP_003467563.1| PREDICTED: ras-related protein Rab-1A-like [Cavia porcellus]
gi|354471845|ref|XP_003498151.1| PREDICTED: ras-related protein Rab-1A-like [Cricetulus griseus]
gi|395731755|ref|XP_002812010.2| PREDICTED: ras-related protein Rab-1A [Pongo abelii]
gi|395829763|ref|XP_003788014.1| PREDICTED: ras-related protein Rab-1A [Otolemur garnettii]
gi|397521755|ref|XP_003830953.1| PREDICTED: ras-related protein Rab-1A [Pan paniscus]
gi|402891075|ref|XP_003908785.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|402891077|ref|XP_003908786.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|403260564|ref|XP_003922736.1| PREDICTED: ras-related protein Rab-1A [Saimiri boliviensis
boliviensis]
gi|410954918|ref|XP_003984106.1| PREDICTED: ras-related protein Rab-1A isoform 1 [Felis catus]
gi|51338603|sp|P62820.3|RAB1A_HUMAN RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338604|sp|P62821.3|RAB1A_MOUSE RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338716|sp|Q6NYB7.3|RAB1A_RAT RecName: Full=Ras-related protein Rab-1A
gi|51338790|sp|P62822.3|RAB1A_CANFA RecName: Full=Ras-related protein Rab-1A
gi|2144600|pir||TVDGYP GTP-binding protein Rab1 - dog
gi|6969622|gb|AAF33844.1|AF226873_1 small GTP-binding protein RAB1A [Mus musculus]
gi|20379034|gb|AAM21077.1|AF498929_1 small GTP binding protein RAB1A [Homo sapiens]
gi|55457|emb|CAA68284.1| unnamed protein product [Mus musculus]
gi|550060|gb|AAA60240.1| GTP-binding protein [Homo sapiens]
gi|763158|emb|CAA33760.1| GTP-binding protein [Mus musculus]
gi|6006435|emb|CAB56775.1| rab1 [Canis lupus familiaris]
gi|12654175|gb|AAH00905.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|26329917|dbj|BAC28697.1| unnamed protein product [Mus musculus]
gi|33096735|emb|CAE11872.1| hypothetical protein [Homo sapiens]
gi|37515280|gb|AAH02077.3| RAB1, member RAS oncogene family [Mus musculus]
gi|44890248|gb|AAH66662.1| RAB1, member RAS oncogene family [Rattus norvegicus]
gi|49168464|emb|CAG38727.1| RAB1A [Homo sapiens]
gi|54695926|gb|AAV38335.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|54695928|gb|AAV38336.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|61355917|gb|AAX41190.1| RAB1A member RAS oncogene family [synthetic construct]
gi|61355926|gb|AAX41191.1| RAB1A member RAS oncogene family [synthetic construct]
gi|74147521|dbj|BAE38660.1| unnamed protein product [Mus musculus]
gi|74189058|dbj|BAE39292.1| unnamed protein product [Mus musculus]
gi|74197039|dbj|BAE35072.1| unnamed protein product [Mus musculus]
gi|112292935|dbj|BAF02845.1| Rab1A [Mus musculus]
gi|119620324|gb|EAW99918.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|119620328|gb|EAW99922.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|120419448|gb|ABM21543.1| RAB1A, member RAS oncogene family [Bos taurus]
gi|123994817|gb|ABM85010.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|148675882|gb|EDL07829.1| RAB1, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149044748|gb|EDL97934.1| rCG23301, isoform CRA_b [Rattus norvegicus]
gi|159906367|gb|ABX10872.1| RAB1A [Capra hircus]
gi|189054895|dbj|BAG37879.1| unnamed protein product [Homo sapiens]
gi|190689469|gb|ACE86509.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|190690831|gb|ACE87190.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|307685159|dbj|BAJ20510.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|355562769|gb|EHH19363.1| hypothetical protein EGK_20053 [Macaca mulatta]
gi|380783935|gb|AFE63843.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|380783937|gb|AFE63844.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|383420425|gb|AFH33426.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|384948550|gb|AFI37880.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|410220890|gb|JAA07664.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410220892|gb|JAA07665.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308940|gb|JAA33070.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308942|gb|JAA33071.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308944|gb|JAA33072.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410350819|gb|JAA42013.1| RAB1A, member RAS oncogene family [Pan troglodytes]
Length = 205
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
>gi|126697336|gb|ABO26625.1| Ras-related protein Rab-1A [Haliotis discus discus]
Length = 205
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
>gi|357125787|ref|XP_003564571.1| PREDICTED: ras-related protein RABE1a-like [Brachypodium
distachyon]
Length = 216
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 12 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 71
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V +VL+G
Sbjct: 72 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLIG 128
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R + T G+ A + + + ETSAK + NVE+
Sbjct: 110 WIRNIEQHASDNVNKVLIGNKADMDESKRAVSTAQGQALADEYGIKFFETSAKTNLNVEQ 169
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LAE
Sbjct: 170 VFFSIARDIKQRLAE 184
>gi|52345478|ref|NP_001004787.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148230336|ref|NP_001080138.1| RAB1A, member RAS oncogene family [Xenopus laevis]
gi|27924279|gb|AAH45014.1| Rab1-prov protein [Xenopus laevis]
gi|49250530|gb|AAH74522.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117557991|gb|AAI27357.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 204
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
>gi|302782443|ref|XP_002972995.1| rab family GTPase [Selaginella moellendorffii]
gi|302805428|ref|XP_002984465.1| rab family GTPase [Selaginella moellendorffii]
gi|300147853|gb|EFJ14515.1| rab family GTPase [Selaginella moellendorffii]
gi|300159596|gb|EFJ26216.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 68/135 (50%), Positives = 97/135 (71%), Gaps = 3/135 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE+ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELEGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKA 123
Query: 123 GL---KIVNEMASAA 134
L K+V+ + A
Sbjct: 124 DLTAKKVVDTQTAKA 138
Score = 39.3 bits (90), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 199 MARNKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
+ NK D +++ T+ + FA + +LETSAK + NVE+ FM +AAE+ ++A +
Sbjct: 118 LVGNKADLTAKKVVDTQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQ 176
>gi|255584780|ref|XP_002533108.1| protein with unknown function [Ricinus communis]
gi|223527099|gb|EEF29280.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQ 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LA+
Sbjct: 169 VFFSIARDIKQRLAD 183
>gi|66810383|ref|XP_638915.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208510|sp|P34139.2|RAB1A_DICDI RecName: Full=Ras-related protein Rab-1A
gi|60467471|gb|EAL65493.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 202
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+N + IKLQIWD
Sbjct: 4 DYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + TF+ + WL+EI+ +A V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|388516339|gb|AFK46231.1| unknown [Medicago truncatula]
Length = 215
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 54/88 (61%), Gaps = 9/88 (10%)
Query: 180 NEACF-----YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLET 230
+EA F ++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ET
Sbjct: 99 DEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSEGQALADEYGIKFFET 158
Query: 231 SAKASDNVEKLFMQIAAELMEKLAEKLT 258
SAK + NVE++F IA ++ ++LA+ ++
Sbjct: 159 SAKTNMNVEEVFFSIARDIKQRLADTVS 186
>gi|18447917|dbj|BAB84324.1| ras-related protein RAB8-3 [Nicotiana tabacum]
Length = 216
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LAE
Sbjct: 169 VFFSIARDIKQRLAE 183
>gi|307105958|gb|EFN54205.1| GTP-binding protein yptV1 [Chlorella variabilis]
Length = 204
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y FLFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE++ + IKLQIWD
Sbjct: 6 EYDFLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWD 65
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+V+D++ Q +F+ + WL EI+ YA+ V ++LVG +
Sbjct: 66 TAGQERFRTITSSYYRGAHGIIVVFDVTDQESFNNVKQWLNEIDRYANENVNKLLVGNKT 125
Query: 123 GL 124
L
Sbjct: 126 DL 127
>gi|170592447|ref|XP_001900976.1| Rab family protein 8 [Brugia malayi]
gi|158591043|gb|EDP29656.1| Rab family protein 8, putative [Brugia malayi]
Length = 237
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 92/116 (79%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF+ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVDRMIIG 120
>gi|115464323|ref|NP_001055761.1| Os05g0461300 [Oryza sativa Japonica Group]
gi|47900325|gb|AAT39172.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579312|dbj|BAF17675.1| Os05g0461300 [Oryza sativa Japonica Group]
gi|215767251|dbj|BAG99479.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767268|dbj|BAG99496.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767288|dbj|BAG99516.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196931|gb|EEC79358.1| hypothetical protein OsI_20237 [Oryza sativa Indica Group]
gi|222631859|gb|EEE63991.1| hypothetical protein OsJ_18820 [Oryza sativa Japonica Group]
Length = 216
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQ 168
Query: 241 LFMQIAAELMEKLAEKLTIMHDRGV 265
+F IA ++ ++LAE + D+ +
Sbjct: 169 VFFSIARDIKQRLAETDSKPEDKTI 193
>gi|440907831|gb|ELR57927.1| Ras-related protein Rab-1A, partial [Bos grunniens mutus]
Length = 246
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 48 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 107
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 108 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 164
>gi|72535190|ref|NP_001026957.1| ras-related protein Rab-1A [Sus scrofa]
gi|75056559|sp|Q52NJ2.3|RAB1A_PIG RecName: Full=Ras-related protein Rab-1A
gi|62868642|gb|AAY17509.1| Ras-related protein Rab-1A [Sus scrofa]
Length = 205
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVG 123
>gi|385888878|gb|AFI98561.1| RabE1 [Nicotiana benthamiana]
Length = 216
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQ 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LA+
Sbjct: 169 VFFSIARDIKQRLAD 183
>gi|224104483|ref|XP_002313450.1| predicted protein [Populus trichocarpa]
gi|222849858|gb|EEE87405.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQ 168
Query: 241 LFMQIAAELMEKLAEKLT 258
+F IA ++ ++L++ T
Sbjct: 169 VFFSIARDIKQRLSDTDT 186
>gi|327505559|gb|AEA92307.1| Rab3 [Hevea brasiliensis]
Length = 216
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LAE
Sbjct: 169 VFFSIARDIKKRLAE 183
>gi|156095590|ref|XP_001613830.1| small GTPase Rab1A [Plasmodium vivax Sal-1]
gi|148802704|gb|EDL44103.1| small GTPase Rab1A, putative [Plasmodium vivax]
Length = 200
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 92/124 (74%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ Y LFK++L+G++GVGK+CL+ RF + +TIGVDF IKT+EI ++ IKLQIW
Sbjct: 3 DSYDSLFKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+IT SYYR A +I+VYD++ + +F+ + +W+ EIE+YAS V +VL+G
Sbjct: 63 DTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNWIIEIEKYASEDVQKVLIGNK 122
Query: 122 SGLK 125
LK
Sbjct: 123 IDLK 126
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 202 NKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
NKID + DR + E G++ A ++ +LETSAK + NVE+ F +A E+ K
Sbjct: 121 NKIDLKNDRNVSYEEGKELADSCNIQFLETSAKIAHNVEQAFKTMAHEIKNK 172
>gi|302595187|gb|ADL59582.1| Rab1 [Hevea brasiliensis]
Length = 216
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A ++ + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADKYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LA+
Sbjct: 169 VFFSIARDIKQRLAD 183
>gi|359806847|ref|NP_001241313.1| uncharacterized protein LOC100779203 [Glycine max]
gi|255641310|gb|ACU20932.1| unknown [Glycine max]
Length = 214
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 9/88 (10%)
Query: 180 NEACF-----YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLET 230
+EA F ++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ET
Sbjct: 99 DEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFET 158
Query: 231 SAKASDNVEKLFMQIAAELMEKLAEKLT 258
SAK + NVE++F IA ++ ++LA+ T
Sbjct: 159 SAKTNLNVEEVFFSIARDIKQRLADTDT 186
>gi|3024527|sp|Q39433.1|RB1BV_BETVU RecName: Full=Ras-related protein RAB1BV
gi|974776|emb|CAA89021.1| small G protein [Beta vulgaris subsp. vulgaris]
Length = 215
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAEKLT 258
+F IA ++ ++LA+ T
Sbjct: 169 VFFSIARDIKQRLADSDT 186
>gi|19112997|ref|NP_596205.1| GTPase Ypt1 [Schizosaccharomyces pombe 972h-]
gi|141302|sp|P11620.2|YPT1_SCHPO RecName: Full=GTP-binding protein ypt1
gi|5148|emb|CAA36319.1| ypt1 [Schizosaccharomyces pombe]
gi|6723924|emb|CAB66454.1| GTPase Ypt1 [Schizosaccharomyces pombe]
Length = 203
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 105/157 (66%), Gaps = 2/157 (1%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T E+ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA V R+LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKS 123
Query: 123 GL--KIVNEMASAAGLLCTVDPALATALASDKTDLDE 157
+ K V E + A +++ A D T++++
Sbjct: 124 DMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQ 160
>gi|312283527|dbj|BAJ34629.1| unnamed protein product [Thellungiella halophila]
Length = 216
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F I ++ ++L++
Sbjct: 169 VFFSIGRDIKQRLSD 183
>gi|224057960|ref|XP_002299410.1| predicted protein [Populus trichocarpa]
gi|118481403|gb|ABK92644.1| unknown [Populus trichocarpa]
gi|222846668|gb|EEE84215.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|83595175|gb|ABC25044.1| RAS related GTP-binding protein RAB10 [Hydra vulgaris]
Length = 203
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 90/116 (77%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF+ F +TIG+DF IKTVE++ ++IKLQIWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKTCLLFRFSDDAFNTTFISTIGIDFKIKTVEVDGKKIKLQIWDT 65
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERF +IT SYYR A ++LVYDI+ + TFD + WLR I+E+AS V R+++G
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAKWLRNIDEHASEGVERMILG 121
>gi|303750|dbj|BAA02116.1| GTP-binding protein [Pisum sativum]
gi|738940|prf||2001457H GTP-binding protein
Length = 202
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 199 MARNKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
+ NK D D ++ +E + FA + ++ETSAK ++NVE+ FM +AAE+ ++A +
Sbjct: 118 LVGNKSDLADNKVVSSETAKAFADEIGIPFMETSAKNANNVEQAFMAMAAEIKNRMASQ 176
>gi|18447921|dbj|BAB84326.1| ras-related protein RAB8-5 [Nicotiana tabacum]
Length = 216
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 93/117 (79%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++++RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDSKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LAE
Sbjct: 169 VFFSIARDIKQRLAE 183
>gi|343424907|emb|CBQ68445.1| probable GTP-binding protein ypt1 [Sporisorium reilianum SRZ2]
Length = 208
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 95/133 (71%), Gaps = 2/133 (1%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 7 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ TF + WL+EI+ YA V ++LVG S
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRYACEGVNKLLVGNKS 126
Query: 123 GL--KIVNEMASA 133
L K V E A+A
Sbjct: 127 DLTNKKVVEYATA 139
>gi|217071342|gb|ACJ84031.1| unknown [Medicago truncatula]
Length = 202
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 193 SNNIH-CMARNKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELM 250
S N++ + NK D D+++ +E + FA + ++ETSAK + NVE+ FM +AAE+
Sbjct: 111 SENVNKLLVGNKSDLSDKKVVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEIK 170
Query: 251 EKLAEK 256
++A +
Sbjct: 171 NRMASQ 176
>gi|355714860|gb|AES05141.1| RAB1A, member RAS oncoprotein family [Mustela putorius furo]
Length = 195
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 53 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 112
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 113 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 169
>gi|15231322|ref|NP_190192.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|145332765|ref|NP_001078248.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|186510716|ref|NP_001118780.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|297815758|ref|XP_002875762.1| hypothetical protein ARALYDRAFT_484985 [Arabidopsis lyrata subsp.
lyrata]
gi|114088|sp|P28186.1|RAE1C_ARATH RecName: Full=Ras-related protein RABE1c; Short=AtRABE1c; AltName:
Full=Ras-related protein Ara-3; AltName:
Full=Ras-related protein Rab8A; Short=AtRab8A
gi|217837|dbj|BAA00830.1| small GTP-binding protein [Arabidopsis thaliana]
gi|7798994|emb|CAB90933.1| GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|14334918|gb|AAK59637.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|14596015|gb|AAK68735.1| GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|25054949|gb|AAN71951.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|25084212|gb|AAN72197.1| GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|297321600|gb|EFH52021.1| hypothetical protein ARALYDRAFT_484985 [Arabidopsis lyrata subsp.
lyrata]
gi|332644585|gb|AEE78106.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|332644586|gb|AEE78107.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|332644587|gb|AEE78108.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
Length = 216
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F I ++ ++L++
Sbjct: 169 VFFSIGRDIKQRLSD 183
>gi|388498114|gb|AFK37123.1| unknown [Lotus japonicus]
Length = 212
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETS K + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSTKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+ IA ++ ++LA+
Sbjct: 169 VLFSIARDIKQRLAD 183
>gi|301610616|ref|XP_002934841.1| PREDICTED: ras-related protein Rab-8A [Xenopus (Silurana)
tropicalis]
Length = 207
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVEKMILG 120
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 14/117 (11%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKID-REDREIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D E R++ E GE A + + ++ETS
Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVEKMILGNKCDVNEKRQVSKEKGEKLALEYGIKFMETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFL 288
AKA+ NVE F +A ++ K+ +++ +G +I D + K SF
Sbjct: 152 AKANINVENAFFTLARDIKAKMDKRMEGNSPQGSNQGVKITQ------DQQKKSSFF 202
>gi|452819428|gb|EME26487.1| Rab family, other [Galdieria sulphuraria]
Length = 203
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/133 (49%), Positives = 98/133 (73%), Gaps = 2/133 (1%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYNESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YA+ V ++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKTWLHEIDRYANESVNKLLVGNKN 123
Query: 123 GL--KIVNEMASA 133
L K V + A+A
Sbjct: 124 DLTTKKVVDTATA 136
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 211 IPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
+ T ++FA + +LETSAK S+NVE+ F+ +A E+ E++A +
Sbjct: 131 VDTATAKEFADSLGIKFLETSAKTSENVEQAFITMAQEIKERMASQ 176
>gi|359806992|ref|NP_001241076.1| uncharacterized protein LOC100816795 [Glycine max]
gi|255638007|gb|ACU19319.1| unknown [Glycine max]
Length = 216
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 93/117 (79%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++++RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDSKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
Query: 180 NEACF-----YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLET 230
+EA F ++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ET
Sbjct: 99 DEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFET 158
Query: 231 SAKASDNVEKLFMQIAAELMEKLAE 255
SAK + NVE++F IA ++ ++LA+
Sbjct: 159 SAKTNMNVEEVFFSIARDIKQRLAD 183
>gi|255539911|ref|XP_002511020.1| protein with unknown function [Ricinus communis]
gi|223550135|gb|EEF51622.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|55742328|ref|NP_001007162.1| ras-related protein Rab-1A [Danio rerio]
gi|29571131|gb|AAH50239.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|38541759|gb|AAH62857.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|182889992|gb|AAI65910.1| Rab1a protein [Danio rerio]
Length = 201
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 120
>gi|195427545|ref|XP_002061837.1| GK17214 [Drosophila willistoni]
gi|194157922|gb|EDW72823.1| GK17214 [Drosophila willistoni]
Length = 207
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 108/160 (67%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++N++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +F+ + +W+R IEE AS V ++L+G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLA 163
L +++ G ++ + S K ++ +E L
Sbjct: 125 LNDKRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLT 164
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK + D R++ E GE A + + ++ETSAKAS NVE+ F+ +A+++ K +++
Sbjct: 121 NKCELNDKRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRM 177
>gi|356499659|ref|XP_003518654.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 216
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
Query: 180 NEACF-----YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLET 230
+EA F ++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ET
Sbjct: 99 DEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFET 158
Query: 231 SAKASDNVEKLFMQIAAELMEKLAE 255
SAK + NVE++F IA ++ ++LA+
Sbjct: 159 SAKTNMNVEEVFFSIARDIKQRLAD 183
>gi|357510455|ref|XP_003625516.1| Ras-like protein [Medicago truncatula]
gi|355500531|gb|AES81734.1| Ras-like protein [Medicago truncatula]
Length = 216
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LA+
Sbjct: 169 VFFSIARDIKQRLAD 183
>gi|356568975|ref|XP_003552683.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 216
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
Query: 180 NEACF-----YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLET 230
+EA F ++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ET
Sbjct: 99 DEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFET 158
Query: 231 SAKASDNVEKLFMQIAAELMEKLAE 255
SAK + NVE++F IA ++ ++LA+
Sbjct: 159 SAKTNMNVEEVFFSIARDIKQRLAD 183
>gi|156616376|ref|NP_001096112.1| uncharacterized protein LOC100124616 [Danio rerio]
gi|152012662|gb|AAI50405.1| Zgc:171927 protein [Danio rerio]
Length = 210
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEMEGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YA V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEQESFNNVKQWLEEIDRYACENVSKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|357111103|ref|XP_003557354.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+TVE++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTASFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 42.4 bits (98), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ + +PT G+ A + + + ET AK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKKALPTSKGQALADEYGIPFFETGAKTNLNVEQ 168
Query: 241 LFMQIAAELMEKLAEKLTIMHDRGV 265
+F IA ++ ++L + + DR +
Sbjct: 169 VFFSIAKDIKQRLVKTDSKPEDRTI 193
>gi|871508|emb|CAA90082.1| small GTP-binding protein [Pisum sativum]
Length = 215
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
Query: 180 NEACF-----YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLET 230
+EA F ++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ET
Sbjct: 99 DEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFET 158
Query: 231 SAKASDNVEKLFMQIAAELMEKLAE 255
SAK + NVE++F IA ++ ++LA+
Sbjct: 159 SAKTNMNVEEVFFSIARDIKQRLAD 183
>gi|255587494|ref|XP_002534292.1| protein with unknown function [Ricinus communis]
gi|223525564|gb|EEF28091.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LA+
Sbjct: 169 VFFSIARDIKQRLAD 183
>gi|224063625|ref|XP_002301234.1| predicted protein [Populus trichocarpa]
gi|222842960|gb|EEE80507.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|116779261|gb|ABK21206.1| unknown [Picea sitchensis]
gi|224284661|gb|ACN40063.1| unknown [Picea sitchensis]
Length = 202
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKN 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|197101924|ref|NP_001127003.1| ras-related protein Rab-8A [Pongo abelii]
gi|75070428|sp|Q5R4A3.1|RAB8A_PONAB RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|55733469|emb|CAH93413.1| hypothetical protein [Pongo abelii]
Length = 207
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKRD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD 156
+ +++ G +D + S K +++
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANIN 157
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D D R++ E GE A + + ++ETSAKA+ NVE F +A ++ K+ +KL
Sbjct: 121 NKRDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL 177
>gi|145545648|ref|XP_001458508.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834260|emb|CAI44498.1| rab_C41 [Paramecium tetraurelia]
gi|124426328|emb|CAK91111.1| unnamed protein product [Paramecium tetraurelia]
Length = 210
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 95/134 (70%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY+FLFKV+L+GN+GVGK+C++ R+++ F TIGVDF KTV I +KLQIWD
Sbjct: 6 DYQFLFKVLLIGNSGVGKSCMLMRYSENQFTNNFYNTIGVDFKTKTVAIGENNVKLQIWD 65
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQ+RFR+IT SYYR A +I+VYDI+ + +F+ + W+ EI++YAS V R+LVG +
Sbjct: 66 TAGQDRFRTITCSYYRGAQGIIIVYDITDRESFENVKTWIAEIDKYASESVNRMLVGNKA 125
Query: 123 GLKIVNEMASAAGL 136
+ E++ GL
Sbjct: 126 DITERREVSYEEGL 139
>gi|224136446|ref|XP_002326862.1| predicted protein [Populus trichocarpa]
gi|118483707|gb|ABK93747.1| unknown [Populus trichocarpa]
gi|222835177|gb|EEE73612.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|1654144|gb|AAB17726.1| small GTP-binding protein rab [Brassica rapa subsp. campestris]
Length = 222
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F I ++ ++L++
Sbjct: 169 VFFSIGRDIKQRLSD 183
>gi|47225841|emb|CAF98321.1| unnamed protein product [Tetraodon nigroviridis]
Length = 207
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 108/156 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ +R+KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDSFNTTFISTIGIDFKIRTIELDGKRVKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDIS + +F+ + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDISNEKSFENIKNWIRNIEEHASSDVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ L+ +E
Sbjct: 125 MTDRRQVSKDRGEKLAIDYGVKFLETSAKSSLNVEE 160
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDREDR-EIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D DR ++ + GE A + + +LETS
Sbjct: 92 NEKSFENIKNWIRNIEEHASSDVEKMILGNKCDMTDRRQVSKDRGEKLAIDYGVKFLETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGVGMLTRI 271
AK+S NVE+ F +A +++ L+ K G G +I
Sbjct: 152 AKSSLNVEEAFYTMARDILHNLSSKTADPTAGGSGKPVKI 191
>gi|327505553|gb|AEA92304.1| Rab2 [Hevea brasiliensis]
Length = 216
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LA+
Sbjct: 169 VFFSIARDIKQRLAD 183
>gi|50306647|ref|XP_453297.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642431|emb|CAH00393.1| KLLA0D05313p [Kluyveromyces lactis]
Length = 204
Score = 145 bits (365), Expect = 1e-31, Method: Composition-based stats.
Identities = 71/163 (43%), Positives = 111/163 (68%), Gaps = 14/163 (8%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF IKTVE++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ + + VL++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKTWLQEIDRFGTAGVLKLLVGNKN 123
Query: 123 GL--------KIVNEMASAAGLLCTVDPALATALASDKTDLDE 157
L ++ E A + G+ P + T+ A D ++++E
Sbjct: 124 DLTDKKVVDTEVAKEFADSIGI-----PFIETS-ALDSSNVEE 160
>gi|311907|emb|CAA51011.1| ras-related GTP-binding protein [Nicotiana tabacum]
Length = 203
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLSEIDRYASDGVNKILVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|432953336|ref|XP_004085355.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 120
>gi|223649310|gb|ACN11413.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 120
>gi|5146|emb|CAA33192.1| YPT1-related protein [Schizosaccharomyces pombe]
Length = 206
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 104/156 (66%), Gaps = 2/156 (1%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T E+ + +KLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDT 67
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA V R+LVG S
Sbjct: 68 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSD 127
Query: 124 L--KIVNEMASAAGLLCTVDPALATALASDKTDLDE 157
+ K V E + A +++ A D T++++
Sbjct: 128 MVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQ 163
>gi|226509821|ref|NP_001141291.1| uncharacterized protein LOC100273382 [Zea mays]
gi|194703818|gb|ACF85993.1| unknown [Zea mays]
gi|195624662|gb|ACG34161.1| ras-related protein ARA-3 [Zea mays]
gi|414588872|tpg|DAA39443.1| TPA: Ras protein ARA-3 [Zea mays]
Length = 214
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+TVE++ +R+KLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRVKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSRGQALADEYGIKFFETSAKTNLNVEQ 168
Query: 241 LFMQIAAELMEKLAEKLTIMHDRGVGM 267
+F IA ++ ++LAE + DR + +
Sbjct: 169 VFFSIARDIKQRLAESDSKPEDRTISI 195
>gi|2808638|emb|CAA04701.1| small GTP-binding protein [Daucus carota]
Length = 216
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEMDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + E SAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFEASAKTNMNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LAE
Sbjct: 169 VFFSIAKDIKQRLAE 183
>gi|388507596|gb|AFK41864.1| unknown [Lotus japonicus]
Length = 212
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + +E+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDENKRAVPTSKGQALADEYGIKFFETSAKTNLTLEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LA+
Sbjct: 169 VFFSIARDIKQRLAD 183
>gi|449459908|ref|XP_004147688.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
gi|449525132|ref|XP_004169573.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
Length = 216
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LA+
Sbjct: 169 VFFSIARDIKQRLAD 183
>gi|326490445|dbj|BAJ84886.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326491645|dbj|BAJ94300.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 214
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+TVE++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W++ IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIKNIEQHASDNVSKILVG 127
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N+ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIKNIEQHASDNVSKILVGNKADMDESKRAVPTSKGQALADEYGIQFFETSAKTNMNVEQ 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++L+E
Sbjct: 169 VFFSIARDIKQRLSE 183
>gi|212724108|ref|NP_001131632.1| uncharacterized protein LOC100192989 [Zea mays]
gi|242090779|ref|XP_002441222.1| hypothetical protein SORBIDRAFT_09g022670 [Sorghum bicolor]
gi|194690528|gb|ACF79348.1| unknown [Zea mays]
gi|194692096|gb|ACF80132.1| unknown [Zea mays]
gi|194700986|gb|ACF84577.1| unknown [Zea mays]
gi|194703832|gb|ACF86000.1| unknown [Zea mays]
gi|195628548|gb|ACG36104.1| ras-related protein ARA-3 [Zea mays]
gi|241946507|gb|EES19652.1| hypothetical protein SORBIDRAFT_09g022670 [Sorghum bicolor]
Length = 215
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQ 168
Query: 241 LFMQIAAELMEKLAEKLTIMHDRGV 265
+F IA ++ ++LAE + D+ +
Sbjct: 169 VFFSIARDIKQRLAETDSKPEDKAI 193
>gi|449448661|ref|XP_004142084.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
gi|449502574|ref|XP_004161681.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
Length = 216
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LA+
Sbjct: 169 VFFSIARDIKQRLAD 183
>gi|225435058|ref|XP_002284365.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297746128|emb|CBI16184.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LA+
Sbjct: 169 VFFSIARDIKQRLAD 183
>gi|18447913|dbj|BAB84322.1| ras-related protein RAB8-1 [Nicotiana tabacum]
Length = 216
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEE 168
Query: 241 LFMQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKS 283
+F IA ++ ++LAE +R RI + G A++
Sbjct: 169 VFFSIARDIKQRLAES----DNRAEPQTIRINQPDQGAGGAQT 207
>gi|2118463|pir||I78851 GTP-binding protein MEL - mouse
gi|234748|gb|AAB19682.1| RAS-related [Mus sp.]
Length = 206
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
>gi|149062038|gb|EDM12461.1| rCG48149, isoform CRA_c [Rattus norvegicus]
Length = 231
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 102/151 (67%), Gaps = 8/151 (5%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 123 GL---KIVNEMASAAGLLCTVDPALATALAS 150
L K+V+ + PALA S
Sbjct: 124 DLTTKKVVDNTTAKVSR-----PALAVGSGS 149
>gi|328784309|ref|XP_003250431.1| PREDICTED: hypothetical protein LOC409456 [Apis mellifera]
Length = 1867
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 89/122 (72%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T++++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD + Q TF+ + WL EI+ YA V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKC 126
Query: 123 GL 124
L
Sbjct: 127 DL 128
>gi|224054837|ref|XP_002298373.1| predicted protein [Populus trichocarpa]
gi|222845631|gb|EEE83178.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQ 168
Query: 241 LFMQIAAELMEKLAEKLT 258
+F IA ++ ++LA+ T
Sbjct: 169 VFFSIARDIKQRLADTDT 186
>gi|164658714|ref|XP_001730482.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
gi|159104378|gb|EDP43268.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
Length = 212
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 88/117 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 7 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ + TF + WL+EIE YA V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDESTFANVKQWLQEIERYACEGVNKLLVG 123
>gi|119620329|gb|EAW99923.1| RAB1A, member RAS oncogene family, isoform CRA_f [Homo sapiens]
Length = 257
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 59 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 118
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 119 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 175
>gi|17737663|ref|NP_524172.1| Rab8, isoform A [Drosophila melanogaster]
gi|386771441|ref|NP_001246837.1| Rab8, isoform C [Drosophila melanogaster]
gi|194751943|ref|XP_001958283.1| GF10843 [Drosophila ananassae]
gi|194874419|ref|XP_001973397.1| GG13365 [Drosophila erecta]
gi|195354284|ref|XP_002043628.1| GM15893 [Drosophila sechellia]
gi|195496110|ref|XP_002095554.1| GE22459 [Drosophila yakuba]
gi|195591647|ref|XP_002085550.1| GD12244 [Drosophila simulans]
gi|2313045|dbj|BAA21711.1| rab8 [Drosophila melanogaster]
gi|7293732|gb|AAF49101.1| Rab8, isoform A [Drosophila melanogaster]
gi|17862678|gb|AAL39816.1| LD44762p [Drosophila melanogaster]
gi|40788410|dbj|BAD07038.1| Rab8 [Drosophila melanogaster]
gi|190625565|gb|EDV41089.1| GF10843 [Drosophila ananassae]
gi|190655180|gb|EDV52423.1| GG13365 [Drosophila erecta]
gi|194127796|gb|EDW49839.1| GM15893 [Drosophila sechellia]
gi|194181655|gb|EDW95266.1| GE22459 [Drosophila yakuba]
gi|194197559|gb|EDX11135.1| GD12244 [Drosophila simulans]
gi|220946338|gb|ACL85712.1| Rab8-PA [synthetic construct]
gi|220956084|gb|ACL90585.1| Rab8-PA [synthetic construct]
gi|383292017|gb|AFH04508.1| Rab8, isoform C [Drosophila melanogaster]
Length = 207
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 108/160 (67%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++N++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +F+ + +W+R IEE AS V ++L+G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLA 163
L +++ G ++ + S K ++ +E L
Sbjct: 125 LTDKRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLT 164
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 8/93 (8%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK + D R++ E GE A + + ++ETSAKAS NVE+ F+ +A+++ K +++
Sbjct: 121 NKCELTDKRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEAN 180
Query: 261 HDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSL 293
+ G + +K D+++K S+LS SL
Sbjct: 181 NPPKGG-----HQLKPM--DSRTKDSWLSRCSL 206
>gi|403303364|ref|XP_003942298.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Saimiri
boliviensis boliviensis]
Length = 207
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 109/158 (68%), Gaps = 1/158 (0%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD-EDEH 160
+ +++ G +D + S K +++ E+ H
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANINVENRH 162
>gi|387017930|gb|AFJ51083.1| ras-related protein Rab-1A-like [Crotalus adamanteus]
Length = 201
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +++ + WL+EIE YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIERYASENVNKLLVG 120
>gi|147783308|emb|CAN64127.1| hypothetical protein VITISV_022421 [Vitis vinifera]
Length = 216
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LA+
Sbjct: 169 VFFSIARDIKQRLAD 183
>gi|402904632|ref|XP_003915146.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Papio anubis]
gi|426387631|ref|XP_004060267.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Gorilla gorilla
gorilla]
Length = 207
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 109/158 (68%), Gaps = 1/158 (0%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD-EDEH 160
+ +++ G +D + S K +++ E+ H
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANINVENRH 162
>gi|388519291|gb|AFK47707.1| unknown [Lotus japonicus]
Length = 214
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +R+KLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRVKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
Query: 180 NEACF-----YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLET 230
+EA F ++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ET
Sbjct: 99 DEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFET 158
Query: 231 SAKASDNVEKLFMQIAAELMEKLAE 255
SAK + NVE++F IA ++ ++LA+
Sbjct: 159 SAKTNLNVEEVFFSIARDIKQRLAD 183
>gi|195173155|ref|XP_002027359.1| GL15675 [Drosophila persimilis]
gi|198465444|ref|XP_002134976.1| GA23499 [Drosophila pseudoobscura pseudoobscura]
gi|194113202|gb|EDW35245.1| GL15675 [Drosophila persimilis]
gi|198150162|gb|EDY73603.1| GA23499 [Drosophila pseudoobscura pseudoobscura]
Length = 207
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 108/160 (67%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++N++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +F+ + +W+R IEE AS V ++L+G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLA 163
L +++ G ++ + S K ++ +E L
Sbjct: 125 LHDKRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLT 164
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK + D R++ E GE A + + ++ETSAKAS NVE+ F+ +A+++ K +++
Sbjct: 121 NKCELHDKRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEAN 180
Query: 261 HDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSL 293
+ G + D+++K S+LS SL
Sbjct: 181 NPPKGGHQLKTL-------DSRTKDSWLSRCSL 206
>gi|346467655|gb|AEO33672.1| hypothetical protein [Amblyomma maculatum]
Length = 235
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 59 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 118
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 119 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKS 178
Query: 123 GL 124
L
Sbjct: 179 DL 180
>gi|351724389|ref|NP_001236800.1| uncharacterized protein LOC100499844 [Glycine max]
gi|255627067|gb|ACU13878.1| unknown [Glycine max]
Length = 216
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
Query: 180 NEACF-----YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLET 230
+EA F ++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ET
Sbjct: 99 DEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFET 158
Query: 231 SAKASDNVEKLFMQIAAELMEKLAE 255
SAK + NVE++F IA ++ ++LA+
Sbjct: 159 SAKTNMNVEEVFFSIARDIKQRLAD 183
>gi|224100931|ref|XP_002312073.1| predicted protein [Populus trichocarpa]
gi|118486181|gb|ABK94933.1| unknown [Populus trichocarpa]
gi|222851893|gb|EEE89440.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++++E
Sbjct: 169 VFFSIARDIKQRISE 183
>gi|390478681|ref|XP_002761905.2| PREDICTED: ras-related protein Rab-8A isoform 1 [Callithrix
jacchus]
Length = 219
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK D D R++ E GE A + + ++ETSAKA+ NVE F +A ++ K+ +KL
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLATA 180
Query: 261 HDRGV 265
RGV
Sbjct: 181 P-RGV 184
>gi|225439876|ref|XP_002278842.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297741550|emb|CBI32682.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F I ++ ++LAE
Sbjct: 169 VFFSIGRDIKQRLAE 183
>gi|414588871|tpg|DAA39442.1| TPA: Ras protein ARA-3 [Zea mays]
Length = 228
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+TVE++ +R+KLQIWD
Sbjct: 25 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRVKLQIWD 84
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 85 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 141
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 123 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSRGQALADEYGIKFFETSAKTNLNVEQ 182
Query: 241 LFMQIAAELMEKLAEKLTIMHDRGVGM 267
+F IA ++ ++LAE + DR + +
Sbjct: 183 VFFSIARDIKQRLAESDSKPEDRTISI 209
>gi|388510710|gb|AFK43421.1| unknown [Lotus japonicus]
Length = 212
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LA+
Sbjct: 169 VFFSIARDIKQRLAD 183
>gi|47211161|emb|CAF92536.1| unnamed protein product [Tetraodon nigroviridis]
Length = 247
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 120
>gi|390346094|ref|XP_003726477.1| PREDICTED: ras-related protein Rab-1A isoform 1 [Strongylocentrotus
purpuratus]
Length = 206
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
>gi|348538473|ref|XP_003456715.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 203
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 120
>gi|403072064|pdb|4FMB|B Chain B, Vira-Rab1 Complex Structure
gi|403072066|pdb|4FMB|D Chain D, Vira-Rab1 Complex Structure
gi|403072068|pdb|4FMB|F Chain F, Vira-Rab1 Complex Structure
Length = 171
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 113/170 (66%), Gaps = 14/170 (8%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 2 EYDALFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 61
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 62 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 121
Query: 123 GL---KIVN-----EMASAAGLLCTVDPALATALASDKTDLDEDEHVLAC 164
L K+V+ E A + G+ P L T+ A + T++++ +A
Sbjct: 122 DLTTKKVVDYTTAKEFADSLGI-----PFLETS-AKNATNVEQSFMTMAA 165
>gi|74152890|dbj|BAE27741.1| unnamed protein product [Mus musculus]
Length = 208
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D D R++ E GE A + + ++ETSAKA+ NVE F +A ++ K+ +KL
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL 177
>gi|308321720|gb|ADO28003.1| ras-related protein rab-10 [Ictalurus furcatus]
Length = 200
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 96/132 (72%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTC++ RF+ F +TIG+DF IKTVE+N +RIKLQIWDT
Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKRIKLQIWDT 65
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERF +IT SYYR A ++LVYDI+ +F+ ++ WLR IEE+A+ V ++L+G
Sbjct: 66 AGQERFHTITTSYYRGAMGILLVYDITNAKSFENISKWLRNIEEHANEDVEKMLLGNKCD 125
Query: 124 LKIVNEMASAAG 135
++ V ++ A G
Sbjct: 126 MEDVRVVSKAKG 137
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 185 YLASLEGHSNNI--HCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L ++E H+N + NK D ED R + GE A H++ + ETSAKA+ N+EK
Sbjct: 103 WLRNIEEHANEDVEKMLLGNKCDMEDVRVVSKAKGEQIASEHNIRFFETSAKANINIEKA 162
Query: 242 FMQIAAELMEKLAEK 256
F+ +A +++ K K
Sbjct: 163 FLTLAEDILHKTPGK 177
>gi|85001490|ref|XP_955461.1| small GTP-binding protein Rab1 [Theileria annulata strain Ankara]
gi|74951238|sp|Q4UB16.1|RAB1_THEAN RecName: Full=Ras-related protein Rab-1; AltName: Full=Small
GTP-binding protein rab1
gi|65303607|emb|CAI75985.1| small GTP-binding protein Rab1, putative [Theileria annulata]
Length = 220
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 93/120 (77%), Gaps = 1/120 (0%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
M++Y +LFK++++G++G GK+ L+ RF + +TIGVDF IKTV+I+N IKLQI
Sbjct: 1 MKEYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTD-WLREIEEYASFKVLRVLVG 119
WDTAGQERFR+IT +YYR AH +I VYD++ + +FD +T+ WL++I++YA+ V ++L+G
Sbjct: 61 WDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIG 120
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 193 SNNIHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELME 251
SN + NKID D R + + + A++++M Y+E SAK NVEK F IA L +
Sbjct: 112 SNVCKLLIGNKIDLVDSRVVLADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKD 171
Query: 252 KLAE 255
K+ +
Sbjct: 172 KVTQ 175
>gi|326914865|ref|XP_003203743.1| PREDICTED: ras-related protein Rab-1A-like [Meleagris gallopavo]
Length = 231
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 90/116 (77%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWDT
Sbjct: 34 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 93
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 94 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 149
>gi|301117468|ref|XP_002906462.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|2500076|sp|Q01890.1|YPT1_PHYIN RecName: Full=Ras-like GTP-binding protein YPT1
gi|940432|gb|AAB40355.1| ras related protein PiYpt1 [Phytophthora infestans]
gi|262107811|gb|EEY65863.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|348688420|gb|EGZ28234.1| hypothetical protein PHYSODRAFT_309136 [Phytophthora sojae]
Length = 201
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YA V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 33/46 (71%)
Query: 209 REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
R + T+ ++FA+ + +LETSAK + NVEK FM +AA++ +++A
Sbjct: 129 RVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMA 174
>gi|397484922|ref|XP_003813614.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Pan paniscus]
Length = 207
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 109/158 (68%), Gaps = 1/158 (0%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD-EDEH 160
+ +++ G +D + S K +++ E+ H
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANINVENRH 162
>gi|357122765|ref|XP_003563085.1| PREDICTED: GTP-binding protein YPTM2-like [Brachypodium distachyon]
Length = 203
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|390339812|ref|XP_003725089.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Strongylocentrotus
purpuratus]
Length = 201
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 89/116 (76%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTCL+ RF+ F +TIG+DF IKTVE+N ++IKLQIWDT
Sbjct: 6 YDLLFKLLLIGDSGVGKTCLLFRFSDDTFSTTFISTIGIDFKIKTVELNGKKIKLQIWDT 65
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERF +IT SYYR A ++LVYDI+ + TFD + WLR I+E+A+ V ++L+G
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAKWLRNIQEHANEDVEKMLLG 121
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
Query: 185 YLASLEGHSNNI--HCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L +++ H+N + NK D +D R I + GE AK + + ++ETSAKA+ NVE+
Sbjct: 103 WLRNIQEHANEDVEKMLLGNKCDMDDKRMINKDRGETIAKENGIKFMETSAKANINVEQA 162
Query: 242 FMQIAAELMEKLAEKLT 258
FM +AA++++K ++ T
Sbjct: 163 FMTLAADILKKYPQRDT 179
>gi|334688829|ref|NP_001229300.1| RAB8A, member RAS oncogene family [Pan troglodytes]
gi|397484920|ref|XP_003813613.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Pan paniscus]
gi|343961933|dbj|BAK62554.1| ras-related protein Rab-8A [Pan troglodytes]
gi|410222044|gb|JAA08241.1| RAB8A, member RAS oncogene family [Pan troglodytes]
gi|410266796|gb|JAA21364.1| RAB8A, member RAS oncogene family [Pan troglodytes]
gi|410342733|gb|JAA40313.1| RAB8A, member RAS oncogene family [Pan troglodytes]
Length = 207
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD 156
+ +++ G +D + S K +++
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANIN 157
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D D R++ E GE A + + ++ETSAKA+ NVE F +A ++ K+ +KL
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL 177
>gi|38372905|ref|NP_075615.2| ras-related protein Rab-8A [Mus musculus]
gi|162287395|ref|NP_446450.2| ras-related protein Rab-8A [Rattus norvegicus]
gi|354473828|ref|XP_003499134.1| PREDICTED: ras-related protein Rab-8A-like [Cricetulus griseus]
gi|82592519|sp|P55258.2|RAB8A_MOUSE RecName: Full=Ras-related protein Rab-8A; AltName: Full=Oncogene
c-mel; Flags: Precursor
gi|82592520|sp|P35280.2|RAB8A_RAT RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|18043409|gb|AAH19990.1| RAB8A, member RAS oncogene family [Mus musculus]
gi|26344994|dbj|BAC36146.1| unnamed protein product [Mus musculus]
gi|26347909|dbj|BAC37603.1| unnamed protein product [Mus musculus]
gi|26348727|dbj|BAC38003.1| unnamed protein product [Mus musculus]
gi|77748034|gb|AAI05864.1| Rab8a protein [Rattus norvegicus]
gi|112292969|dbj|BAF02862.1| Rab8A [Mus musculus]
gi|148678837|gb|EDL10784.1| RAB8A, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149036165|gb|EDL90831.1| RAB8A, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|338855122|gb|AEJ31940.1| RAB8 [Rattus norvegicus]
Length = 207
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD 156
+ +++ G +D + S K +++
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANIN 157
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D D R++ E GE A + + ++ETSAKA+ NVE F +A ++ K+ +KL
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL 177
>gi|301753801|ref|XP_002912748.1| PREDICTED: ras-related protein Rab-8A-like [Ailuropoda melanoleuca]
gi|281343489|gb|EFB19073.1| hypothetical protein PANDA_000488 [Ailuropoda melanoleuca]
Length = 207
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD 156
+ +++ G +D + S K +++
Sbjct: 125 VNDKRQVSKERGKKLALDYGIKFMETSAKANIN 157
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D D R++ E G+ A + + ++ETSAKA+ NVE F +A ++ K+ +KL
Sbjct: 121 NKCDVNDKRQVSKERGKKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL 177
>gi|350535551|ref|NP_001233944.1| GTP-binding protein [Solanum lycopersicum]
gi|313029|emb|CAA49600.1| GTP-binding protein [Solanum lycopersicum]
Length = 216
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G+ GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDTGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F I ++ ++L+E
Sbjct: 169 VFFSIGKDIKQRLSE 183
>gi|49522647|gb|AAH71176.1| Rab8a protein, partial [Rattus norvegicus]
Length = 206
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 4 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 63
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 64 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 123
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD 156
+ +++ G +D + S K +++
Sbjct: 124 VNDKRQVSKERGEKLALDYGIKFMETSAKANIN 156
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D D R++ E GE A + + ++ETSAKA+ NVE F +A ++ K+ +KL
Sbjct: 120 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL 176
>gi|298707797|emb|CBJ30228.1| Rab1B, RAB family GTPase [Ectocarpus siliculosus]
Length = 203
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 93/123 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++++ IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + +F+ + WL EI+ YA V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKS 123
Query: 123 GLK 125
L+
Sbjct: 124 DLE 126
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 202 NKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLT 258
NK D E R + TE + FA + +LETSAK + NVEK FM +A+++ ++ + T
Sbjct: 121 NKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPT 178
>gi|281501032|pdb|3L0I|B Chain B, Complex Structure Of Sidm/drra With The Wild Type Rab1
gi|281501034|pdb|3L0I|D Chain D, Complex Structure Of Sidm/drra With The Wild Type Rab1
Length = 199
Score = 144 bits (364), Expect = 1e-31, Method: Composition-based stats.
Identities = 74/163 (45%), Positives = 112/163 (68%), Gaps = 14/163 (8%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 29 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 88
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 89 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 148
Query: 123 GL---KIVN-----EMASAAGLLCTVDPALATALASDKTDLDE 157
L K+V+ E A + G+ P L T+ A + T++++
Sbjct: 149 DLTTKKVVDYTTAKEFADSLGI-----PFLETS-AKNATNVEQ 185
>gi|412986893|emb|CCO15319.1| predicted protein [Bathycoccus prasinos]
Length = 204
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 105/157 (66%), Gaps = 2/157 (1%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE+ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLFRFADDTYQESYISTIGVDFKIRTVELEGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YA+ V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKTWLSEIDRYANENVNKLLVGNKS 123
Query: 123 GL--KIVNEMASAAGLLCTVDPALATALASDKTDLDE 157
L K V + A+A + A + T++++
Sbjct: 124 DLTSKKVVDYATAKAFADEIGIPFMETSAKNATNVEQ 160
>gi|125858678|gb|AAI29779.1| LOC100037230 protein [Xenopus laevis]
Length = 205
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 3 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 62
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 63 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVEKMVLG 118
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 14/117 (11%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKID-REDREIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D E R++ E GE A + + ++ETS
Sbjct: 90 NEKSFDNIKNWIRNIEEHASSDVEKMVLGNKCDVNEKRQVSKEKGEKLALEYGIKFMETS 149
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFL 288
AKA+ NVE F +A ++ K+ +++ +G +I D + K SF
Sbjct: 150 AKANINVENAFFTLARDIKAKMDKRMEGNSPQGSNQGVKITQ------DQQKKSSFF 200
>gi|46326983|gb|AAS88430.1| ethylene-responsive small GTP-binding protein [Oryza sativa
Japonica Group]
Length = 214
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+TVE++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +P G+ FA + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPPSKGQAFADEYGIKFFETSAKTNLNVEQ 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++L+E
Sbjct: 169 VFFFIARDIKQRLSE 183
>gi|345498195|ref|XP_003428175.1| PREDICTED: ras-related protein Rab-1A-like isoform 2 [Nasonia
vitripennis]
Length = 207
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 92/124 (74%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
ME++ +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T++++ + IKLQI
Sbjct: 1 MEEHDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGG 120
WDTAGQERFR+IT SYYR AH +I+VYD + Q +F+ + WL EI+ YA V ++LVG
Sbjct: 61 WDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIDRYACDNVNKLLVGN 120
Query: 121 TSGL 124
S L
Sbjct: 121 KSDL 124
>gi|224109576|ref|XP_002315241.1| predicted protein [Populus trichocarpa]
gi|118482120|gb|ABK92991.1| unknown [Populus trichocarpa]
gi|222864281|gb|EEF01412.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGRRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++++E
Sbjct: 169 VFFSIARDIKQRISE 183
>gi|443693080|gb|ELT94523.1| hypothetical protein CAPTEDRAFT_177262 [Capitella teleta]
Length = 206
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 8 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELDRKTIKLQIWD 67
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 68 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASESVNKLLVG 124
>gi|351712945|gb|EHB15864.1| Ras-related protein Rab-8A [Heterocephalus glaber]
Length = 207
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D D R++ E GE A + + ++ETSAKA+ NVE F +A ++ K+ +KL
Sbjct: 121 NKCDVNDKRQVSRERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL 177
>gi|221057099|ref|XP_002259687.1| GTPase [Plasmodium knowlesi strain H]
gi|193809759|emb|CAQ40461.1| GTPase, putative [Plasmodium knowlesi strain H]
Length = 200
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 92/124 (74%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ Y LFK++L+G++GVGK+CL+ RF + +TIGVDF IKT+EI ++ IKLQIW
Sbjct: 3 DSYDSLFKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+IT SYYR A +I+VYD++ + +F+ + +W+ EIE+YAS V ++L+G
Sbjct: 63 DTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNWIIEIEKYASEDVQKILIGNK 122
Query: 122 SGLK 125
LK
Sbjct: 123 IDLK 126
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 202 NKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
NKID + DR + E G++ A ++ +LETSAK + NVE+ F +A E+ K
Sbjct: 121 NKIDLKNDRNVSYEEGKELADSCNIQFLETSAKIAHNVEQAFKTMAHEIKNK 172
>gi|158341664|ref|NP_001103449.1| ras-related protein Rab-1B [Rattus norvegicus]
gi|293332049|ref|NP_001168820.1| uncharacterized protein LOC100382625 [Zea mays]
gi|392343176|ref|XP_002727643.2| PREDICTED: ras-related protein Rab-1B-like [Rattus norvegicus]
gi|149042337|gb|EDL96044.1| rCG63295 [Rattus norvegicus]
gi|149062037|gb|EDM12460.1| rCG48149, isoform CRA_b [Rattus norvegicus]
gi|223973195|gb|ACN30785.1| unknown [Zea mays]
Length = 201
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|336367724|gb|EGN96068.1| hypothetical protein SERLA73DRAFT_141217 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380437|gb|EGO21590.1| hypothetical protein SERLADRAFT_396608 [Serpula lacrymans var.
lacrymans S7.9]
Length = 204
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ TF + WL+EI+ YAS V ++LVG S
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRYASEGVNKLLVGNKS 124
Query: 123 GL 124
L
Sbjct: 125 DL 126
>gi|417408724|gb|JAA50900.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 214
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 17 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 76
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S
Sbjct: 77 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 136
Query: 123 GL 124
L
Sbjct: 137 DL 138
>gi|355714863|gb|AES05142.1| RAB1B, member RAS oncoprotein family [Mustela putorius furo]
Length = 210
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 14 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 73
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S
Sbjct: 74 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 133
Query: 123 GL 124
L
Sbjct: 134 DL 135
>gi|348526868|ref|XP_003450941.1| PREDICTED: ras-related protein Rab-13-like [Oreochromis niloticus]
Length = 200
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 108/160 (67%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y FLFK++L+G++GVGKTCL+ RF + F +TIG+DF +KT+E++ +++KLQ+WDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVDGKKVKLQVWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERF++IT +YYR A +ILVYDI+ + +F+ + +W++ I+E AS V R+L+G
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVSRMLLGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLA 163
++ +++ G D + S K+ ++ +E LA
Sbjct: 125 IEAKRKVSKETGEKLAKDHGIRFFETSAKSSINVEESFLA 164
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 202 NKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
NK D E R++ E GE AK H + + ETSAK+S NVE+ F+ +A +++++ ++K
Sbjct: 121 NKCDIEAKRKVSKETGEKLAKDHGIRFFETSAKSSINVEESFLALARDILKQSSKK 176
>gi|195020252|ref|XP_001985156.1| GH16908 [Drosophila grimshawi]
gi|193898638|gb|EDV97504.1| GH16908 [Drosophila grimshawi]
Length = 207
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 108/159 (67%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++N++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +F+ + +W+R IEE A+ V ++L+G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENAAADVEKMLLGNKCE 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVL 162
L +++ G V+ + S K ++ +E L
Sbjct: 125 LNDKRQVSKERGEQLAVEYGIKFMETSAKASINVEEAFL 163
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK + D R++ E GE A + + ++ETSAKAS NVE+ F+ +A+++ K +++
Sbjct: 121 NKCELNDKRQVSKERGEQLAVEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEAN 180
Query: 261 HDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSL 293
+ G ++ I ++K S+LS SL
Sbjct: 181 NPPKGGHQLKLTEI-------RTKDSWLSRCSL 206
>gi|16933567|ref|NP_005361.2| ras-related protein Rab-8A [Homo sapiens]
gi|55741707|ref|NP_001003152.1| ras-related protein Rab-8A [Canis lupus familiaris]
gi|345090993|ref|NP_001230731.1| RAB8A, member RAS oncogene family [Sus scrofa]
gi|194223710|ref|XP_001914834.1| PREDICTED: ras-related protein Rab-8A-like [Equus caballus]
gi|402904630|ref|XP_003915145.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Papio anubis]
gi|403303362|ref|XP_003942297.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Saimiri
boliviensis boliviensis]
gi|426387629|ref|XP_004060266.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Gorilla gorilla
gorilla]
gi|46577633|sp|P61007.1|RAB8A_CANFA RecName: Full=Ras-related protein Rab-8A; AltName: Full=Oncogene
c-mel; Flags: Precursor
gi|46810392|sp|P61006.1|RAB8A_HUMAN RecName: Full=Ras-related protein Rab-8A; AltName: Full=Oncogene
c-mel; Flags: Precursor
gi|75076100|sp|Q4R5P1.1|RAB8A_MACFA RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|20379062|gb|AAM21091.1|AF498943_1 small GTP binding protein RAB8 [Homo sapiens]
gi|452318|emb|CAA40065.1| rab8 small GTP binding protein [Homo sapiens]
gi|6006436|emb|CAB56776.1| rab8 [Canis lupus familiaris]
gi|12804237|gb|AAH02977.1| RAB8A, member RAS oncogene family [Homo sapiens]
gi|30583207|gb|AAP35848.1| mel transforming oncogene (derived from cell line NK14)- RAB8
homolog [Homo sapiens]
gi|49168650|emb|CAG38820.1| RAB8A [Homo sapiens]
gi|49457542|emb|CAG47070.1| RAB8A [Homo sapiens]
gi|60655631|gb|AAX32379.1| RAB8A [synthetic construct]
gi|67970483|dbj|BAE01584.1| unnamed protein product [Macaca fascicularis]
gi|119604932|gb|EAW84526.1| RAB8A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119604933|gb|EAW84527.1| RAB8A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123983416|gb|ABM83449.1| RAB8A, member RAS oncogene family [synthetic construct]
gi|123998119|gb|ABM86661.1| RAB8A, member RAS oncogene family [synthetic construct]
gi|355703272|gb|EHH29763.1| Oncogene c-mel [Macaca mulatta]
gi|355755572|gb|EHH59319.1| Oncogene c-mel [Macaca fascicularis]
gi|380785255|gb|AFE64503.1| ras-related protein Rab-8A [Macaca mulatta]
gi|383409677|gb|AFH28052.1| ras-related protein Rab-8A [Macaca mulatta]
gi|384944060|gb|AFI35635.1| ras-related protein Rab-8A [Macaca mulatta]
gi|740474|prf||2005309A rab8 GTPase
Length = 207
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD 156
+ +++ G +D + S K +++
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANIN 157
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D D R++ E GE A + + ++ETSAKA+ NVE F +A ++ K+ +KL
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL 177
>gi|392876316|gb|AFM86990.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +++VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIMVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
>gi|431921946|gb|ELK19119.1| Ras-related protein Rab-8A [Pteropus alecto]
Length = 207
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D D R++ E GE A + + ++ETSAKA+ NVE F +A ++ K+ +KL
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL 177
>gi|74826761|sp|Q9TVU5.1|RAB1_THEPA RecName: Full=Ras-related protein Rab-1; AltName: Full=Small
GTP-binding protein rab1; Short=TpRab1
gi|5764095|gb|AAD51132.1|AF107762_1 small GTP-binding protein rab1 [Theileria parva]
gi|5764097|gb|AAD51133.1|AF107763_1 small GTP-binding protein rab1 [Theileria parva]
Length = 220
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 93/120 (77%), Gaps = 1/120 (0%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
M++Y +LFK++++G++G GK+ L+ RF + +TIGVDF IKTV+I+N IKLQI
Sbjct: 1 MKEYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTD-WLREIEEYASFKVLRVLVG 119
WDTAGQERFR+IT +YYR AH +I VYD++ + +FD +T+ WL++I++YA+ V ++L+G
Sbjct: 61 WDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIG 120
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 193 SNNIHCMARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELME 251
SN + NKID E R + + + A++++M Y+E SAK NVEK F IA L +
Sbjct: 112 SNVCKLLIGNKIDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKD 171
Query: 252 KLAE 255
K+ +
Sbjct: 172 KVTQ 175
>gi|157428086|ref|NP_001098951.1| ras-related protein Rab-8A [Bos taurus]
gi|240849277|ref|NP_001155332.1| ras-related protein Rab-8A [Ovis aries]
gi|158513560|sp|A4FV54.1|RAB8A_BOVIN RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|133778133|gb|AAI23756.1| RAB8A protein [Bos taurus]
gi|238566720|gb|ACR46623.1| RAB8A [Ovis aries]
gi|296486043|tpg|DAA28156.1| TPA: ras-related protein Rab-8A [Bos taurus]
gi|385139591|gb|AFI41879.1| RAS oncogene protein [Capra hircus]
gi|440901306|gb|ELR52280.1| Ras-related protein Rab-8A [Bos grunniens mutus]
Length = 207
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD 156
+ +++ G +D + S K +++
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANIN 157
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D D R++ E GE A + + ++ETSAKA+ NVE F +A ++ K+ +KL
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFYTLARDIKAKMDKKL 177
>gi|167524781|ref|XP_001746726.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774996|gb|EDQ88622.1| predicted protein [Monosiga brevicollis MX1]
Length = 203
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 91/123 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYSETYISTIGVDFKIRTIELEGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + +FD + WL EIE YA V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDKESFDNVKQWLTEIERYACENVNKLLVGNKS 123
Query: 123 GLK 125
L+
Sbjct: 124 DLQ 126
>gi|318065097|ref|NP_001187642.1| ras-related protein Rab-10 [Ictalurus punctatus]
gi|308323579|gb|ADO28925.1| ras-related protein rab-10 [Ictalurus punctatus]
Length = 200
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 96/132 (72%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTC++ RF+ F +TIG+DF IKTVE+N +RIKLQIWDT
Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKRIKLQIWDT 65
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERF +IT SYYR A ++LVYDI+ +F+ ++ WLR IEE+A+ V ++L+G
Sbjct: 66 AGQERFHTITTSYYRGAMGILLVYDITNAKSFENISKWLRNIEEHANEDVEKMLLGNKCD 125
Query: 124 LKIVNEMASAAG 135
++ V ++ A G
Sbjct: 126 MEDVRVVSKAKG 137
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 185 YLASLEGHSNNI--HCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L ++E H+N + NK D ED R + GE H++ + ETSAKA+ N+EK
Sbjct: 103 WLRNIEEHANEDVEKMLLGNKCDMEDVRVVSKAKGEQIVSEHNIRFFETSAKANINIEKA 162
Query: 242 FMQIAAELMEKLAEK 256
F+ +A +++ K K
Sbjct: 163 FLTLAEDVLHKTPGK 177
>gi|392596085|gb|EIW85408.1| GTP-binding protein ypt1 [Coniophora puteana RWD-64-598 SS2]
Length = 203
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ TF + WL+EI+ YAS V ++LVG S
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQWLQEIDRYASEGVNKLLVGNKS 124
Query: 123 GL 124
L
Sbjct: 125 DL 126
>gi|432901784|ref|XP_004076945.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 120
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 193 SNNIH-CMARNKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELM 250
S N++ + NK D +++ ++FA + +LETSAK + NVE+ FM +AAE+
Sbjct: 111 SENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIK 170
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACG 279
+++ T+ ++ LT ++K + G
Sbjct: 171 KRMGPGATVGGEKPNVKLTPGTSVKPSSG 199
>gi|47223089|emb|CAG07176.1| unnamed protein product [Tetraodon nigroviridis]
Length = 251
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 113/165 (68%), Gaps = 1/165 (0%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMVLGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMV 168
+ +++ G +D + S K +++ E+V CL ++
Sbjct: 125 INDKRQVSKDRGEKLALDYGIKFMETSAKANINV-ENVRNCLTLM 168
>gi|326490565|dbj|BAJ84946.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 214
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDQKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++L+G
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILIG 127
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 185 YLASLEGHS----NNIHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H+ N I + +D R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILIGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQ 168
Query: 241 LFMQIAAELMEKLAEKLTIMHDRGV 265
+F IA ++ ++LAE + D+ +
Sbjct: 169 VFFSIARDIKQRLAETDSKPEDKTI 193
>gi|410950754|ref|XP_003982068.1| PREDICTED: ras-related protein Rab-8A [Felis catus]
Length = 207
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D D R++ E GE A + + ++ETSAKA+ NVE F +A ++ K+ +KL
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL 177
>gi|410932295|ref|XP_003979529.1| PREDICTED: ras-related protein Rab-1B-like [Takifugu rubripes]
Length = 214
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/133 (48%), Positives = 97/133 (72%), Gaps = 3/133 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T++++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDMDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +++VYD++ Q +F+ + WL EI+ YA V R+LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIVIVYDVTEQESFNNVKLWLDEIDRYACESVSRLLVGNKS 123
Query: 123 ---GLKIVNEMAS 132
G K+V+ A+
Sbjct: 124 DLVGRKVVDAAAA 136
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 199 MARNKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
+ NK D R++ +D ++ +LETSAK SDNVEK+F+ +A+++ ++L+ +
Sbjct: 118 LVGNKSDLVGRKVVDAAAAQDLTSSLEISFLETSAKNSDNVEKVFLTMASDIHQRLSAEE 177
Query: 258 TIMHDRGVGMLTRIYNIKKA 277
+H + G T I A
Sbjct: 178 GAIHQQSRGAQTPRAKINSA 197
>gi|30585389|gb|AAP36967.1| Homo sapiens mel transforming oncogene (derived from cell line
NK14)- RAB8 homolog [synthetic construct]
gi|61373064|gb|AAX43969.1| RAB8A member RAS oncogene family [synthetic construct]
gi|61373066|gb|AAX43970.1| RAB8A member RAS oncogene family [synthetic construct]
Length = 208
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D D R++ E GE A + + ++ETSAKA+ NVE F +A ++ K+ +KL
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL 177
>gi|334326972|ref|XP_001368638.2| PREDICTED: ras-related protein Rab-8A-like [Monodelphis domestica]
Length = 207
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 202 NKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D E R++ E GE A + + ++ETSAKA+ NVE F +A ++ K+ +KL
Sbjct: 121 NKCDVNERRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL 177
>gi|363807324|ref|NP_001242369.1| uncharacterized protein LOC100775804 [Glycine max]
gi|255647140|gb|ACU24038.1| unknown [Glycine max]
Length = 214
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYVYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
Query: 180 NEACF-----YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLET 230
+EA F ++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ET
Sbjct: 99 DEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFET 158
Query: 231 SAKASDNVEKLFMQIAAELMEKLAE 255
SAK + NVE++F IA ++ ++LA+
Sbjct: 159 SAKTNLNVEEVFFSIARDIKQRLAD 183
>gi|21313162|ref|NP_083852.1| ras-related protein Rab-1B [Mus musculus]
gi|354494718|ref|XP_003509482.1| PREDICTED: ras-related protein Rab-1B-like [Cricetulus griseus]
gi|46577116|sp|Q9D1G1.1|RAB1B_MOUSE RecName: Full=Ras-related protein Rab-1B
gi|12834379|dbj|BAB22888.1| unnamed protein product [Mus musculus]
gi|16741106|gb|AAH16408.1| RAB1B, member RAS oncogene family [Mus musculus]
gi|74140247|dbj|BAE33821.1| unnamed protein product [Mus musculus]
gi|112292937|dbj|BAF02846.1| Rab1B [Mus musculus]
gi|148701158|gb|EDL33105.1| RAB1B, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|344243245|gb|EGV99348.1| Ras-related protein Rab-1B [Cricetulus griseus]
Length = 201
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|291190144|ref|NP_001167084.1| ras-related protein Rab-8A [Salmo salar]
gi|223648024|gb|ACN10770.1| Ras-related protein Rab-8A [Salmo salar]
Length = 206
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 94/116 (81%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++N++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDNKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +F+ + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASADVEKMVLG 120
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S ++ M NK D D R++ + GE A + + ++ETS
Sbjct: 92 NEKSFENIKNWIRNIEEHASADVEKMVLGNKCDINDKRQVSKDRGEKLALEYGIKFMETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKL 257
AKA+ NVE F+ +A ++ K+ KL
Sbjct: 152 AKANINVENSFLTLARDIKSKMDTKL 177
>gi|390478683|ref|XP_003735553.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Callithrix
jacchus]
Length = 207
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D D R++ E GE A + + ++ETSAKA+ NVE F +A ++ K+ +KL
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL 177
>gi|428184440|gb|EKX53295.1| hypothetical protein GUITHDRAFT_91995 [Guillardia theta CCMP2712]
Length = 201
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 111/163 (68%), Gaps = 14/163 (8%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTLELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + W+ EI+ YA+ KV ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWMNEIDRYANDKVNKMLVGNKC 123
Query: 123 GL---KIVN-----EMASAAGLLCTVDPALATALASDKTDLDE 157
L K+V+ E A G+ P L T+ A D T++++
Sbjct: 124 DLTAKKVVDYNTAKEFADQLGI-----PFLETS-AKDSTNVEQ 160
>gi|339250788|ref|XP_003374379.1| GTP-binding protein Ypt2 [Trichinella spiralis]
gi|316969320|gb|EFV53438.1| GTP-binding protein Ypt2 [Trichinella spiralis]
Length = 176
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 89/116 (76%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTC++ RF+ F +TIG+DF IKT+E+ ++IKLQIWDT
Sbjct: 6 YDLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDT 65
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERF +IT SYYR A ++LVYDI+ Q +F+ +T WLR IEE+AS V ++L+G
Sbjct: 66 AGQERFHTITMSYYRGAMGIMLVYDITNQKSFENITKWLRNIEEHASEDVEKMLLG 121
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 185 YLASLEGH-SNNIHCMA-RNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L ++E H S ++ M NK D E R + E GE+ A +H + +LETSAKA N++K
Sbjct: 103 WLRNIEEHASEDVEKMLLGNKCDIEEKRMVSKERGEEIAGKHGIRFLETSAKAKINIDKA 162
Query: 242 FMQIAAELMEKL 253
F +A ++ K+
Sbjct: 163 FYDLAEAILNKV 174
>gi|219116316|ref|XP_002178953.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409720|gb|EEC49651.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 208
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 89/120 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +LFK+VL+G++GVGK+CL+ RF F +TIGVDF +TV+I+ + +KLQIWD
Sbjct: 11 DYDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT +YYR A +I+V+D++ +FD + DWL+E+ YA+ +++LVG S
Sbjct: 71 TAGQERFRTITSAYYRGADGIIMVFDVTSTDSFDHVNDWLKEVNRYAAEGTVKLLVGNKS 130
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 194 NNIHCMARNKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELM 250
+ + NK DR DR + E +FA + ++ETSAK++ NVE+ F+ +A EL+
Sbjct: 120 GTVKLLVGNKSDRTADRVVTEEQAREFADELGIPFIETSAKSAKNVEEAFLTMAGELI 177
>gi|332373844|gb|AEE62063.1| unknown [Dendroctonus ponderosae]
Length = 202
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD + Q +F+ + WL EIE YA V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDCTDQDSFNNVKQWLEEIERYACDNVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|357133358|ref|XP_003568292.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDQKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++L+G
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILIG 127
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 185 YLASLEGHS----NNIHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H+ N I + +D R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILIGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQ 168
Query: 241 LFMQIAAELMEKLAEKLTIMHDRGV 265
+F IA ++ ++LAE + D+ +
Sbjct: 169 VFFSIARDIKQRLAETDSKPEDKTI 193
>gi|170094132|ref|XP_001878287.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646741|gb|EDR10986.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 204
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y FLFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 5 EYDFLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ +F + WL+EI+ YAS V ++LVG S
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNESFTHVKQWLQEIDRYASEGVNKLLVGNKS 124
Query: 123 GL 124
L
Sbjct: 125 DL 126
>gi|302794149|ref|XP_002978839.1| rab family GTPase [Selaginella moellendorffii]
gi|300153648|gb|EFJ20286.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/135 (50%), Positives = 97/135 (71%), Gaps = 3/135 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 123 GL---KIVNEMASAA 134
L K+V+ + A
Sbjct: 124 DLTAKKVVDYQTAKA 138
>gi|218511593|gb|ACK77788.1| RAB8A [Cyprinus carpio]
Length = 207
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMILG 120
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 202 NKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D E R++ + GE A + + ++ETSAKA+ NVE F+ +A ++ K+ KL
Sbjct: 121 NKCDINEKRQVSKDRGEKLALEYGIKFMETSAKANINVENSFLTLARDIKSKMDTKL 177
>gi|302787773|ref|XP_002975656.1| rab family GTPase [Selaginella moellendorffii]
gi|300156657|gb|EFJ23285.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/135 (50%), Positives = 97/135 (71%), Gaps = 3/135 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 123 GL---KIVNEMASAA 134
L K+V+ + A
Sbjct: 124 DLTAKKVVDYQTAKA 138
>gi|115495993|ref|NP_001069701.1| ras-related protein Rab-1B [Bos taurus]
gi|110832072|sp|Q2HJH2.1|RAB1B_BOVIN RecName: Full=Ras-related protein Rab-1B
gi|88682888|gb|AAI05394.1| RAB1B, member RAS oncogene family [Bos taurus]
gi|440907365|gb|ELR57519.1| Ras-related protein Rab-1B [Bos grunniens mutus]
Length = 201
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|321475351|gb|EFX86314.1| hypothetical protein DAPPUDRAFT_187550 [Daphnia pulex]
Length = 216
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 104/160 (65%), Gaps = 4/160 (2%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E + FLFK+V++G+ G+GKT LV+RF GVF TIGVDF +KT+ I +++KLQIW
Sbjct: 12 ESFDFLFKIVVIGDCGIGKTSLVQRFKSGVFTERYTNTIGVDFAMKTIVIEGKQVKLQIW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ ++LVYDI+ + +F L W+ EI + + + VL+G
Sbjct: 72 DTAGQERFRTITQSYYRSANGVLLVYDITKRSSFLSLQKWMEEIRRFTANNISWVLIGNK 131
Query: 122 SGLKIVNEMASAAGL-LCTVDPALATAL---ASDKTDLDE 157
+ + E+ L + + P + L A D T++++
Sbjct: 132 CDMDTLREVEQVEALAMAELIPEIVLVLETSAKDNTNVEQ 171
>gi|268555746|ref|XP_002635862.1| C. briggsae CBR-RAB-1 protein [Caenorhabditis briggsae]
gi|308488626|ref|XP_003106507.1| CRE-RAB-1 protein [Caenorhabditis remanei]
gi|308253857|gb|EFO97809.1| CRE-RAB-1 protein [Caenorhabditis remanei]
Length = 205
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 90/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYDI+ Q TF+ + WL+EI+ YA V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVG 123
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 199 MARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
+ NK D R + T+ +D+A + + +LETSAK+S NVE+ F+ +A+E+ ++
Sbjct: 121 LVGNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMG 177
>gi|409046045|gb|EKM55525.1| hypothetical protein PHACADRAFT_256210 [Phanerochaete carnosa
HHB-10118-sp]
Length = 204
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ TF + WL+EI+ YAS V ++LVG S
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRYASEGVNKLLVGNKS 124
Query: 123 GL 124
L
Sbjct: 125 DL 126
>gi|410900346|ref|XP_003963657.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
gi|312987462|gb|ADR31264.1| Rab1 [Sciaenops ocellatus]
Length = 203
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 120
>gi|197127904|gb|ACH44402.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
Length = 217
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 90/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQER R+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERLRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
>gi|395323826|gb|EJF56281.1| GTP-binding protein ypt1 [Dichomitus squalens LYAD-421 SS1]
Length = 206
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 106/164 (64%), Gaps = 2/164 (1%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ Y +LFK++L+G++GVGK+CL+ RF + F +TIGVDF I+T+E+ +KLQIW
Sbjct: 3 DGYDYLFKLLLIGDSGVGKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIELEGRTVKLQIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+I +YYR AH +I+VYD++ TF + W++EIE YAS V ++++G
Sbjct: 63 DTAGQERFRTIAAAYYRGAHGIIMVYDVTDGETFSNVKGWMQEIERYASEGVKKLIIGNK 122
Query: 122 SGL--KIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLA 163
S L K V E + A TV A + T+++E +LA
Sbjct: 123 SDLVEKKVVEYSLAKDFADTVSIPFIETSAKNSTNVEEAFSLLA 166
>gi|194206583|ref|XP_001918101.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-8B-like
[Equus caballus]
Length = 207
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 106/156 (67%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F + IG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEEAFNTTFISPIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ + +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEE 160
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D D R++ E GE A + + +LETS
Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGVGMLTRI 271
AK+S NVE+ F +A ++M KL K+ + G G +I
Sbjct: 152 AKSSTNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGPVKI 191
>gi|195998505|ref|XP_002109121.1| GTP-binding protein o-rab1 [Trichoplax adhaerens]
gi|190589897|gb|EDV29919.1| GTP-binding protein o-rab1 [Trichoplax adhaerens]
Length = 202
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 90/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y FLFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDFLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQVSFNNVKQWLQEIDRYACENVNKLLVG 120
>gi|409082456|gb|EKM82814.1| hypothetical protein AGABI1DRAFT_111382 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200290|gb|EKV50214.1| hypothetical protein AGABI2DRAFT_190604 [Agaricus bisporus var.
bisporus H97]
Length = 204
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ TF + WL+EI+ YAS V ++LVG S
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRYASEGVNKLLVGNKS 124
Query: 123 GL 124
L
Sbjct: 125 DL 126
>gi|221116035|ref|XP_002155975.1| PREDICTED: ras-related protein Rab-1A-like [Hydra magnipapillata]
Length = 202
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 90/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q TF+ + WL+EI+ YA V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQETFNNVKQWLQEIDRYACESVNKLLVG 120
>gi|326433258|gb|EGD78828.1| Rab1/RabD-family small GTPase [Salpingoeca sp. ATCC 50818]
Length = 203
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + +F+ + WL+EI+ YA V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDKDSFENVKQWLQEIDRYACENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|356550253|ref|XP_003543502.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 215
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E + +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEQDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V +VLVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVG 127
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKVLVGNKADMDESKRVVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LA+
Sbjct: 169 VFFSIARDIKQRLAD 183
>gi|399163137|gb|AFP33144.1| rab-1, partial [Caenorhabditis elegans]
Length = 204
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 90/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 6 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 65
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYDI+ Q TF+ + WL+EI+ YA V ++LVG
Sbjct: 66 TAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVG 122
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 199 MARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
+ NK D R + T+ +D+A + + +LETSAK+S NVE+ F+ +A+E+ ++
Sbjct: 120 LVGNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMG 176
>gi|389749024|gb|EIM90201.1| GTP-binding protein ypt1 [Stereum hirsutum FP-91666 SS1]
Length = 204
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ TF + WL+EI+ YAS V ++LVG S
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRYASEGVNKLLVGNKS 124
Query: 123 GL 124
L
Sbjct: 125 DL 126
>gi|225718924|gb|ACO15308.1| Ras-related protein ORAB-1 [Caligus clemensi]
Length = 201
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 90/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ L WL+EI+ YA V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIDRYACENVNKLLVG 120
>gi|145518399|ref|XP_001445075.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412512|emb|CAK77678.1| unnamed protein product [Paramecium tetraurelia]
Length = 211
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 94/134 (70%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY FLFKV+L+GN+GVGK+C++ R+++ F TIGVDF KTV I +KLQIWD
Sbjct: 6 DYHFLFKVLLIGNSGVGKSCMLMRYSENQFTNNFYNTIGVDFKTKTVAIGEHNVKLQIWD 65
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQ+RFR+IT SYYR A +I+VYDI+ + +F+ + W+ EI++YAS V R+LVG +
Sbjct: 66 TAGQDRFRTITCSYYRGAQGIIIVYDITDRESFENVKTWIAEIDKYASESVNRMLVGNKA 125
Query: 123 GLKIVNEMASAAGL 136
+ E++ GL
Sbjct: 126 DITERREVSYEEGL 139
>gi|108711785|gb|ABF99580.1| Ras-related protein ARA-3, putative, expressed [Oryza sativa
Japonica Group]
Length = 176
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+TVE++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
>gi|326912237|ref|XP_003202460.1| PREDICTED: ras-related protein Rab-19-like [Meleagris gallopavo]
Length = 214
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 91/119 (76%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
+ +LFK++L+G++ VGKTC+V RF G F Q TIGVDF +++++I+ +++K+Q+WDT
Sbjct: 12 FDYLFKIILIGDSNVGKTCVVHRFKTGQFYEKQQNTIGVDFTVRSMDIDGKKVKIQVWDT 71
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
AGQERFR+ITQSYYRSAH IL YD++ + TF+ + W+ E+E+Y + ++ +L+G S
Sbjct: 72 AGQERFRTITQSYYRSAHGAILAYDLTRRSTFESIPHWIHEVEKYGAANLVVMLIGNKS 130
>gi|195128585|ref|XP_002008743.1| GI13664 [Drosophila mojavensis]
gi|195379444|ref|XP_002048489.1| GJ13999 [Drosophila virilis]
gi|193920352|gb|EDW19219.1| GI13664 [Drosophila mojavensis]
gi|194155647|gb|EDW70831.1| GJ13999 [Drosophila virilis]
Length = 207
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 108/159 (67%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++N++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +F+ + +W+R IEE A+ V ++L+G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENAAADVEKMLLGNKCE 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVL 162
L +++ G ++ + S K ++ +E L
Sbjct: 125 LNDKRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFL 163
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK + D R++ E GE A + + ++ETSAKAS NVE+ F+ +A+++ K +++
Sbjct: 121 NKCELNDKRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEAN 180
Query: 261 HDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSL 293
+ G ++ I ++K S+LS SL
Sbjct: 181 NPPKGGHQLKLTEI-------RTKDSWLSRCSL 206
>gi|403417830|emb|CCM04530.1| predicted protein [Fibroporia radiculosa]
Length = 219
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 91/123 (73%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ Y +LFK++L+G++GVGK+CL+ RF + F +TIGVDF I+T+E+ + +KLQIW
Sbjct: 3 DGYDYLFKLLLIGDSGVGKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIELEGKMVKLQIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+I +YYR AH +++VYD++ +FD + WL+EIE YAS V ++L+G
Sbjct: 63 DTAGQERFRTIAAAYYRGAHGIVVVYDVTDAESFDNVKGWLQEIERYASENVKKLLIGNK 122
Query: 122 SGL 124
S L
Sbjct: 123 SDL 125
>gi|50728924|ref|XP_416347.1| PREDICTED: ras-related protein Rab-19 [Gallus gallus]
Length = 214
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 91/119 (76%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
+ +LFK++L+G++ VGKTC+V RF G F Q TIGVDF +++++I+ +++K+Q+WDT
Sbjct: 12 FDYLFKIILIGDSNVGKTCVVHRFKTGQFYEKQQNTIGVDFTVRSMDIDGKKVKIQVWDT 71
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
AGQERFR+ITQSYYRSAH IL YD++ + TF+ + W+ E+E+Y + ++ +L+G S
Sbjct: 72 AGQERFRTITQSYYRSAHGAILAYDLTRRSTFESIPHWVHEVEKYGAANLVMMLIGNKS 130
>gi|225713410|gb|ACO12551.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|225714426|gb|ACO13059.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290462177|gb|ADD24136.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290462929|gb|ADD24512.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290463011|gb|ADD24553.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290561479|gb|ADD38140.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290561689|gb|ADD38244.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 90/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ L WL+EI+ YA V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIDRYACENVNKLLVG 120
>gi|194374445|dbj|BAG57118.1| unnamed protein product [Homo sapiens]
Length = 207
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD 156
+ +++ G +D + S K +++
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANIN 157
>gi|89258421|gb|ABD65434.1| Rab10 [Suberites domuncula]
Length = 208
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 87/116 (75%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTC++ R+ F +TIG+DF IKT+E+ +RIKLQIWDT
Sbjct: 11 YDLLFKLLLIGDSGVGKTCVLFRYADDTFNTTFISTIGIDFKIKTIELEGKRIKLQIWDT 70
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERF +IT SYYR A +ILVYDI+ Q +FD +T WL+ IE +AS V R+L+G
Sbjct: 71 AGQERFHTITTSYYRGAMGIILVYDITNQKSFDNITKWLQNIEMHASADVERILIG 126
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 185 YLASLEGHSNNI--HCMARNKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L ++E H++ + NK D E R + P + G A + +LETSAK + N+E+
Sbjct: 108 WLQNIEMHASADVERILIGNKCDWEARRVVPKDRGNALAHNQGISFLETSAKTNYNIEEA 167
Query: 242 FMQIAAELMEKLAEK 256
F Q+A +++ K+ K
Sbjct: 168 FEQLAKQILRKVPAK 182
>gi|17558550|ref|NP_503397.1| Protein RAB-1 [Caenorhabditis elegans]
gi|351059221|emb|CCD67094.1| Protein RAB-1 [Caenorhabditis elegans]
Length = 205
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 90/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYDI+ Q TF+ + WL+EI+ YA V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVG 123
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 199 MARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
+ NK D R + T+ +D+A + + +LETSAK+S NVE+ F+ +A+E+ ++
Sbjct: 121 LVGNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMG 177
>gi|49065350|emb|CAG38493.1| RAB1B [Homo sapiens]
Length = 201
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTENYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|13569962|ref|NP_112243.1| ras-related protein Rab-1B [Homo sapiens]
gi|197100392|ref|NP_001127221.1| ras-related protein Rab-1B [Pongo abelii]
gi|388490382|ref|NP_001253093.1| ras-related protein Rab-1B [Macaca mulatta]
gi|73983002|ref|XP_852545.1| PREDICTED: ras-related protein Rab-1B isoform 1 [Canis lupus
familiaris]
gi|194218484|ref|XP_001491236.2| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Equus
caballus]
gi|301762492|ref|XP_002916663.1| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Ailuropoda
melanoleuca]
gi|332250270|ref|XP_003274276.1| PREDICTED: ras-related protein Rab-1B [Nomascus leucogenys]
gi|344295844|ref|XP_003419620.1| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Loxodonta
africana]
gi|348565037|ref|XP_003468310.1| PREDICTED: ras-related protein Rab-1B-like [Cavia porcellus]
gi|395851731|ref|XP_003798406.1| PREDICTED: ras-related protein Rab-1B [Otolemur garnettii]
gi|397517009|ref|XP_003828712.1| PREDICTED: ras-related protein Rab-1B [Pan paniscus]
gi|403293572|ref|XP_003937787.1| PREDICTED: ras-related protein Rab-1B [Saimiri boliviensis
boliviensis]
gi|410974562|ref|XP_003993713.1| PREDICTED: ras-related protein Rab-1B isoform 1 [Felis catus]
gi|23396834|sp|Q9H0U4.1|RAB1B_HUMAN RecName: Full=Ras-related protein Rab-1B
gi|75070920|sp|Q5RE13.1|RAB1B_PONAB RecName: Full=Ras-related protein Rab-1B
gi|33150668|gb|AAP97212.1|AF092437_1 rab1B [Homo sapiens]
gi|12052796|emb|CAB66570.1| hypothetical protein [Homo sapiens]
gi|49522855|gb|AAH71169.1| RAB1B, member RAS oncogene family [Homo sapiens]
gi|55726450|emb|CAH89994.1| hypothetical protein [Pongo abelii]
gi|117645214|emb|CAL38073.1| hypothetical protein [synthetic construct]
gi|158257604|dbj|BAF84775.1| unnamed protein product [Homo sapiens]
gi|189067518|dbj|BAG37733.1| unnamed protein product [Homo sapiens]
gi|208967236|dbj|BAG73632.1| RAB1B, member RAS oncogene family [synthetic construct]
gi|351710863|gb|EHB13782.1| Ras-related protein Rab-1B [Heterocephalus glaber]
gi|380785433|gb|AFE64592.1| ras-related protein Rab-1B [Macaca mulatta]
gi|384949652|gb|AFI38431.1| ras-related protein Rab-1B [Macaca mulatta]
gi|410214286|gb|JAA04362.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410266454|gb|JAA21193.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410305364|gb|JAA31282.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410336325|gb|JAA37109.1| RAB1B, member RAS oncogene family [Pan troglodytes]
Length = 201
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|234746|gb|AAB19681.1| RAS-related protein MEL [Homo sapiens]
Length = 206
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
NK D D R++ E GE A + + ++ETSAKA+ NVE F +A ++ K+ +K
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKK 176
>gi|15217622|ref|NP_171715.1| Ras-related protein RABD2A [Arabidopsis thaliana]
gi|205371858|sp|P28188.3|RAD2A_ARATH RecName: Full=Ras-related protein RABD2a; Short=AtRABD2a; AltName:
Full=Ras-related protein Ara-5; AltName:
Full=Ras-related protein Rab1B; Short=AtRab1B
gi|15450465|gb|AAK96526.1| At1g02130/T7I23_6 [Arabidopsis thaliana]
gi|16974457|gb|AAL31232.1| At1g02130/T7I23_6 [Arabidopsis thaliana]
gi|332189266|gb|AEE27387.1| Ras-related protein RABD2A [Arabidopsis thaliana]
Length = 203
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF+ + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 193 SNNIH-CMARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELM 250
S+N++ + NK D E+R IP E + FA + ++ETSAK + NVE+ FM ++A +
Sbjct: 111 SDNVNKLLVGNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIK 170
Query: 251 EKLAEK 256
E++A +
Sbjct: 171 ERMASQ 176
>gi|427787063|gb|JAA58983.1| Putative rab subfamily protein of small gtpase [Rhipicephalus
pulchellus]
Length = 208
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 87/118 (73%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E + FLFK+VL+G+ GVGKTC+V RF G++ G TIGVDF +KT+ + +++KLQIW
Sbjct: 5 EHFDFLFKIVLIGDCGVGKTCVVHRFKSGMYVERHGNTIGVDFAMKTLTVEGKKVKLQIW 64
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQERFR+ITQSYYRSA+ +I+VYDI+ + +F L W+ E+ Y V +LVG
Sbjct: 65 DTAGQERFRTITQSYYRSANGVIIVYDITKRSSFLSLPRWVEEVRRYTGSNVPLLLVG 122
>gi|390598341|gb|EIN07739.1| GTP-binding protein ypt1 [Punctularia strigosozonata HHB-11173 SS5]
Length = 204
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ TF + WL+EI+ YAS V ++LVG S
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRYASEGVNKLLVGNKS 124
Query: 123 GL 124
L
Sbjct: 125 DL 126
>gi|131803|sp|P10536.1|RAB1B_RAT RecName: Full=Ras-related protein Rab-1B
gi|57006|emb|CAA32105.1| unnamed protein product [Rattus sp.]
Length = 201
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR++T SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|74185239|dbj|BAE30098.1| unnamed protein product [Mus musculus]
Length = 205
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAG+ERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGEERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
>gi|225454983|ref|XP_002281150.1| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
gi|297744977|emb|CBI38569.3| unnamed protein product [Vitis vinifera]
Length = 203
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 91/123 (73%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
++Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIW
Sbjct: 3 QEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNK 122
Query: 122 SGL 124
L
Sbjct: 123 CDL 125
>gi|148678840|gb|EDL10787.1| RAB8A, member RAS oncogene family, isoform CRA_d [Mus musculus]
gi|149036166|gb|EDL90832.1| RAB8A, member RAS oncogene family, isoform CRA_b [Rattus
norvegicus]
Length = 185
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
>gi|348556994|ref|XP_003464305.1| PREDICTED: ras-related protein Rab-8A-like [Cavia porcellus]
Length = 207
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMVLG 120
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S ++ M NK D D R++ E GE A + + ++ETS
Sbjct: 92 NEKSFDNIRNWIRNIEEHASADVEKMVLGNKCDVNDKRQVSKERGEKLALDYGIKFMETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKL 257
AKA+ NVE F +A ++ K+ +KL
Sbjct: 152 AKANINVENAFFTLARDIKAKMDKKL 177
>gi|291231114|ref|XP_002735510.1| PREDICTED: mel transforming oncogene-like [Saccoglossus
kowalevskii]
Length = 208
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 92/116 (79%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y FLFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKKWIRNIEEHASADVEKMILG 120
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 202 NKIDREDREIPT-EVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D EDR T E GE A + + ++ETSAKAS NVE+ F+ +A ++ K+ +K+
Sbjct: 121 NKCDMEDRRTVTKERGEQLAIEYGIKFMETSAKASVNVEEAFITLARDIKGKMDKKM 177
>gi|402595096|gb|EJW89022.1| rab family protein 8 [Wuchereria bancrofti]
Length = 209
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 92/116 (79%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF+ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVDRMIIG 120
>gi|432917455|ref|XP_004079517.1| PREDICTED: ras-related protein Rab-8A-like [Oryzias latipes]
Length = 209
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 67
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 68 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVEKMVLG 123
>gi|255581964|ref|XP_002531780.1| protein with unknown function [Ricinus communis]
gi|223528573|gb|EEF30594.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKN 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|392567328|gb|EIW60503.1| GTP-binding protein ypt1 [Trametes versicolor FP-101664 SS1]
Length = 204
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ TF + WL+EI+ YAS V ++LVG S
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRYASEGVNKLLVGNKS 124
Query: 123 GL 124
L
Sbjct: 125 DL 126
>gi|402591657|gb|EJW85586.1| member Ras oncogene family RAB1A [Wuchereria bancrofti]
Length = 205
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 92/124 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+++N + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLNGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYDI+ Q +F+ + WL+EI+ YA V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQWLQEIDRYACENVNKLLVGNKC 126
Query: 123 GLKI 126
L I
Sbjct: 127 DLII 130
>gi|353244337|emb|CCA75747.1| related to YPT-1 GTP-binding protein ypt1 [Piriformospora indica
DSM 11827]
Length = 227
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 28 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 87
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ TF + WL+EI+ YAS V ++LVG S
Sbjct: 88 TAGQERFRTITSSYYRGAHGIIVVYDVTDTDTFTNVKQWLQEIDRYASEGVNKLLVGNKS 147
Query: 123 GL 124
L
Sbjct: 148 DL 149
>gi|388502282|gb|AFK39207.1| unknown [Lotus japonicus]
Length = 209
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|2317906|gb|AAC24370.1| ARA-5 [Arabidopsis thaliana]
Length = 258
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF+ + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 59 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWD 118
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + +F+ + WL EI+ YAS V ++LVG S
Sbjct: 119 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKS 178
Query: 123 GL 124
L
Sbjct: 179 DL 180
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 193 SNNIH-CMARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELM 250
S+N++ + NK D E+R IP E + FA + ++ETSAK + NVE+ FM ++A +
Sbjct: 166 SDNVNKLLVGNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIK 225
Query: 251 EKLAEK 256
E++A +
Sbjct: 226 ERMASQ 231
>gi|348544653|ref|XP_003459795.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
gi|410906535|ref|XP_003966747.1| PREDICTED: ras-related protein Rab-1A-like [Takifugu rubripes]
Length = 201
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +++ + WL+EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIDRYASENVNKLLVG 120
>gi|19173100|ref|NP_597651.1| similarity to RAS-LIKE GTP-BINDING PROTEIN YPT1 [Encephalitozoon
cuniculi GB-M1]
gi|19168767|emb|CAD26286.1| similarity to RAS-LIKE GTP-BINDING PROTEIN YPT1 [Encephalitozoon
cuniculi GB-M1]
Length = 201
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 88/115 (76%)
Query: 5 KFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTA 64
K+LFK++L+GN+GVGKTCL++R+T + Q +TIGVDF IK++E+ E++KLQIWDTA
Sbjct: 6 KYLFKMILIGNSGVGKTCLMKRYTDETYSFTQSSTIGVDFKIKSLEVAGEKVKLQIWDTA 65
Query: 65 GQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
GQERFR+I +YYR AH +I+V+D+ + +FD L DWL E+ + S V +++G
Sbjct: 66 GQERFRAIISNYYRGAHGIIIVFDMGSKESFDNLGDWLSEVRKNTSENVEIIILG 120
>gi|7498104|pir||T33855 hypothetical protein D1037.4 - Caenorhabditis elegans
Length = 224
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF+ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A +ILVYDI+ + +F+ + +W+R IEE+A+ V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
++ E++ G ++ S K +L+ DE
Sbjct: 125 IEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDE 160
>gi|385303217|gb|EIF47306.1| gtp-binding protein ypt32 ypt11 [Dekkera bruxellensis AWRI1499]
Length = 220
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 92/123 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY++LFK+VL+G++ VGKT L+ RFT+ F P ATIGV+F +T+EIN +RIK QIWD
Sbjct: 11 DYEYLFKIVLIGDSSVGKTNLLSRFTRDEFNPDSRATIGVEFATRTLEINGKRIKAQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQER+R+IT +YYR A ++VYDIS +++ ++ WL+E++E+A ++ LVG S
Sbjct: 71 TAGQERYRAITAAYYRGAVGALVVYDISNSDSYESVSRWLKEMKEHADANIVIALVGNKS 130
Query: 123 GLK 125
L+
Sbjct: 131 DLE 133
Score = 42.7 bits (99), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 185 YLASLEGHS--NNIHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L ++ H+ N + + NK D E R +PTE +FA H++ + E SA +DNVE
Sbjct: 109 WLKEMKEHADANIVIALVGNKSDLEHLRAVPTEEARNFAAEHNLLFTEASALNADNVEFT 168
Query: 242 FMQIAAELMEKLAEKLTIMHDRGVG 266
F Q+ + + ++++ M + GV
Sbjct: 169 FHQLIKSIYDMVSKRKFDMDENGVA 193
>gi|344283149|ref|XP_003413335.1| PREDICTED: ras-related protein Rab-8A-like [Loxodonta africana]
Length = 223
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D D R++ E GE A + + ++ETSAKA+ NVE F +A ++ K+ +KL
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL 177
>gi|148237538|ref|NP_001083031.1| ras-related protein Rab-8A [Danio rerio]
gi|133778680|gb|AAI34060.1| Rab8a protein [Danio rerio]
Length = 207
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMILG 120
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 202 NKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D E R++ + GE A + + ++ETSAKA+ NVE F+ +A ++ K+ KL
Sbjct: 121 NKCDINEKRQVSKDRGEKLALEYGIKFMETSAKANINVENAFLTLARDIKAKMDTKL 177
>gi|449330155|gb|AGE96418.1| ras-like GTP-binding protein [Encephalitozoon cuniculi]
Length = 201
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 88/115 (76%)
Query: 5 KFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTA 64
K+LFK++L+GN+GVGKTCL++R+T + Q +TIGVDF IK++E+ E++KLQIWDTA
Sbjct: 6 KYLFKMILIGNSGVGKTCLMKRYTDETYSFTQSSTIGVDFKIKSLEVAGEKVKLQIWDTA 65
Query: 65 GQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
GQERFR+I +YYR AH +I+V+D+ + +FD L DWL E+ + S V +++G
Sbjct: 66 GQERFRAIISNYYRGAHGIIIVFDMGSKESFDNLGDWLSEVRKNTSENVEIIILG 120
>gi|74193229|dbj|BAE20616.1| unnamed protein product [Mus musculus]
Length = 201
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++++G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLMIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|334312769|ref|XP_001374724.2| PREDICTED: ras-related protein Rab-1A-like [Monodelphis domestica]
Length = 257
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 114/171 (66%), Gaps = 16/171 (9%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
M DY LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQI
Sbjct: 59 MHDY--LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 116
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGG 120
WDTAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 117 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGN 176
Query: 121 TSGL---KIVN-----EMASAAGLLCTVDPALATALASDKTDLDEDEHVLA 163
L K+V+ E A + G+ P L T+ A + T++++ +A
Sbjct: 177 KCDLTTKKVVDYTTAKEFADSLGI-----PFLETS-AKNATNVEQSFMTMA 221
>gi|391337939|ref|XP_003743321.1| PREDICTED: ras-related protein Rab-1A-like [Metaseiulus
occidentalis]
Length = 207
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 106/158 (67%), Gaps = 2/158 (1%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + +KLQIW
Sbjct: 6 DQYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVVKLQIW 65
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+IT SYYR AH +I+ YD++ Q +F+ + WL+EI+ YA V ++LVG
Sbjct: 66 DTAGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNK 125
Query: 122 SGL--KIVNEMASAAGLLCTVDPALATALASDKTDLDE 157
L K V + ++AA +D A D T++++
Sbjct: 126 CDLTTKKVVDHSTAAEFAKQLDIPFLETSAKDSTNVEQ 163
>gi|170594385|ref|XP_001901944.1| Ras-related protein Rab-1A [Brugia malayi]
gi|158590888|gb|EDP29503.1| Ras-related protein Rab-1A, putative [Brugia malayi]
Length = 205
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 92/124 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+++N + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLNGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYDI+ Q +F+ + WL+EI+ YA V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQWLQEIDRYACENVNKLLVGNKC 126
Query: 123 GLKI 126
L I
Sbjct: 127 DLII 130
>gi|358058494|dbj|GAA95457.1| hypothetical protein E5Q_02111 [Mixia osmundae IAM 14324]
Length = 384
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 90/123 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 137 EYDLLFKLLLIGDSGVGKSCLLLRFADDSYSDSYISTIGVDFKIRTIELGGKTVKLQIWD 196
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q TF + WL+EI+ YA V ++LVG S
Sbjct: 197 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDTFSNVKQWLQEIDRYACEGVDKLLVGNKS 256
Query: 123 GLK 125
L+
Sbjct: 257 DLQ 259
>gi|41055496|ref|NP_957436.1| ras-related protein Rab-1B [Danio rerio]
gi|28839092|gb|AAH47816.1| Zgc:56049 [Danio rerio]
gi|182889374|gb|AAI65006.1| Zgc:56049 protein [Danio rerio]
Length = 201
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +++ + WL+EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIDRYASENVNKLLVG 120
>gi|413938044|gb|AFW72595.1| hypothetical protein ZEAMMB73_730860, partial [Zea mays]
Length = 207
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 90/121 (74%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
+ +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWDT
Sbjct: 9 FDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 68
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 69 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSD 128
Query: 124 L 124
L
Sbjct: 129 L 129
>gi|327260900|ref|XP_003215271.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 203
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 91/118 (77%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ + +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIW
Sbjct: 4 QQHDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIW 63
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 64 DTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 121
>gi|225712954|gb|ACO12323.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 89/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G+ GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDTGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ L WL+EI+ YA V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIDRYACENVNKLLVG 120
>gi|198418247|ref|XP_002129883.1| PREDICTED: similar to Ras-related protein Rab-10 [Ciona
intestinalis]
Length = 202
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 90/116 (77%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTC++ RF+ F +TIG+DF IKTVE+N ++IKLQIWDT
Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKKIKLQIWDT 65
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERF +IT SYYR A+ ++LVYDI+ +F+ ++ WLR IEE+AS V ++L+G
Sbjct: 66 AGQERFHTITTSYYRGANGIMLVYDITNTKSFENISKWLRNIEEHASEDVEKMLLG 121
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 185 YLASLEGH-SNNIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L ++E H S ++ M NK D ED R I E GE AK H + + ETSAK + N+E
Sbjct: 103 WLRNIEEHASEDVEKMLLGNKCDMEDKRMISKERGEMIAKEHGIKFYETSAKNNINIETA 162
Query: 242 FMQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGD 280
F+ +A +++ K K T GV + + + + C +
Sbjct: 163 FIALATDILHKTPVKETGAGSAGVDVTQQRQSSRSCCSN 201
>gi|123417386|ref|XP_001305092.1| GTP-binding protein YPTM2 [Trichomonas vaginalis G3]
gi|62869549|gb|AAX97495.1| small Rab GTPase Rab1a [Trichomonas vaginalis]
gi|72537672|gb|AAZ73762.1| small Rab GTPase [Trichomonas vaginalis]
gi|72537674|gb|AAZ73763.1| small Rab GTPase [Trichomonas vaginalis]
gi|121886589|gb|EAX92162.1| GTP-binding protein YPTM2, putative [Trichomonas vaginalis G3]
Length = 202
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 94/122 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +LFKV+++GN+GVGK+CL+ RF + +F +TIGVDF I+ +E++ + IKLQIWD
Sbjct: 5 DYDYLFKVLIIGNSGVGKSCLLLRFAEDMFSDNYISTIGVDFKIRKIELDGKSIKLQIWD 64
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT+SYYR ++ +++VYDI+ + +F+ + W+ EI+ +AS V R+LVG +
Sbjct: 65 TAGQERFRTITKSYYRGSNGIVVVYDITNRDSFEQVQHWMSEIDNHASQDVCRLLVGNKA 124
Query: 123 GL 124
L
Sbjct: 125 DL 126
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 185 YLASLEGHSNNIHC--MARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLF 242
+++ ++ H++ C + NK D DR + TE GE A++ + ++ETSAK S NVE +F
Sbjct: 103 WMSEIDNHASQDVCRLLVGNKADLPDRAVKTEEGEALARQFGIPFMETSAKESLNVENMF 162
Query: 243 MQIAAELMEKLA 254
+ +A + +K+
Sbjct: 163 ITMATSMKKKVG 174
>gi|391337937|ref|XP_003743320.1| PREDICTED: ras-related protein Rab-1A-like [Metaseiulus
occidentalis]
Length = 207
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 106/157 (67%), Gaps = 2/157 (1%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + +KLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVVKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+ YD++ Q +F+ + WL+EI+ YA V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKC 126
Query: 123 GL--KIVNEMASAAGLLCTVDPALATALASDKTDLDE 157
L K V + ++AA +D A D T++++
Sbjct: 127 DLTTKKVVDHSTAAEFAKQLDIPFLETSAKDSTNVEQ 163
>gi|348528771|ref|XP_003451889.1| PREDICTED: nck-associated protein 1 [Oreochromis niloticus]
Length = 1123
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 101/163 (61%)
Query: 390 RRKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTF 449
R++K KK + KPGAES RK R MDKLH+ LTELC + C + V+D
Sbjct: 638 RKQKKPMPKKGEVQKEKPGAESLRKDRTVANNMDKLHLMLTELCSCYSLCGDFVVFDHIV 697
Query: 450 APREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMT 509
P E+L LE+R S +V M +N T EI +PS+LLA +RAY+ L ++ Y+++D+T
Sbjct: 698 VPTEFLISQLETRLSEIIVRMTNYNQTTQEITRPSDLLAGIRAYVANLHSLSCYINVDVT 757
Query: 510 RVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
R+ + LLQQTQ +DSHG +TV LY W+ E LLR+ S + +
Sbjct: 758 RLVKSVLLQQTQPLDSHGGQTVTTLYTNWFLESLLRQASNSLI 800
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 75/98 (76%), Gaps = 4/98 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNID-- 308
+KLAEKLTI+++RG G+L R+ IKK CGD K +PSFL+DK++ES IK I KKFPNID
Sbjct: 5 QKLAEKLTILNERGNGVLIRMNYIKKTCGDPKLRPSFLTDKAMESAIKYINKKFPNIDYR 64
Query: 309 --IKSVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
I++++ I + +S+++ + + YY +F+D++ F+D VY
Sbjct: 65 GNIQNLTSIQRQKSEVLSNTTSYYESFLDVIEFRDHVY 102
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 82/137 (59%), Gaps = 10/137 (7%)
Query: 540 SEVLLRRVSETQV-----KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRM 589
SE+++R + Q + +LL +R Y ++ Y+++D+TR+ + LLQQTQ +
Sbjct: 712 SEIIVRMTNYNQTTQEITRPSDLLAGIRAYVANLHSLSCYINVDVTRLVKSVLLQQTQPL 771
Query: 590 DSHGEKTVAALYIQWYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNEL 649
DSHG +TV LY W+ E LLR+ S I F+S + F AEEFSD++EL
Sbjct: 772 DSHGGQTVTTLYTNWFLESLLRQASNSLIVHCPTLHCFMSQVTDAEQSFRAEEFSDISEL 831
Query: 650 RALADLIGPYGMKLLNE 666
+ALA+LIG YG+K L+E
Sbjct: 832 QALAELIGAYGLKFLSE 848
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 7/113 (6%)
Query: 96 DCLTDWLREIEEYAS--FKVLRVLVGGTSGLKI---VNEMASAAGLLCTVDPALATALAS 150
+CL D L + Y + + LR + +++ + E+ASAAGL C +DP+L A+ S
Sbjct: 917 ECLKDILHKHCPYMTGPIQCLRDFSNPEADIQVTLSIYELASAAGLPCDIDPSLVAAIRS 976
Query: 151 DKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACFYLASLEGHSNNIHCMAR 201
+TD ++EH L+ LL+V++AV +P LA + FY GH+NNIHC+AR
Sbjct: 977 MQTDNTSPDEEHKLSRLLLVYIAVSLPLLALDPNSFYNREHGGHNNNIHCLAR 1029
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
FN AHEM + SD ++PRLGQM ++Y+ P KKL+EEF PH
Sbjct: 154 FNCAHEMTNGSSDPSYPRLGQMFLEYDHPWKKLTEEFGPH 193
>gi|241998682|ref|XP_002433984.1| RAS-related protein, putative [Ixodes scapularis]
gi|215495743|gb|EEC05384.1| RAS-related protein, putative [Ixodes scapularis]
Length = 155
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+ YD++ Q +F+ + WL+EI+ YA V ++LVG S
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKS 126
Query: 123 GL 124
L
Sbjct: 127 DL 128
>gi|356558229|ref|XP_003547410.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 215
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E + +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEQDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYGIKFFETSAKTDLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LA+
Sbjct: 169 VFFSIARDIKQRLAD 183
>gi|393231749|gb|EJD39338.1| GTP-binding protein ypt1 [Auricularia delicata TFB-10046 SS5]
Length = 204
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 95/133 (71%), Gaps = 2/133 (1%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ TF + WL+EI+ YAS V ++LVG S
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDMDTFTNVKQWLQEIDRYASEGVNKLLVGNKS 124
Query: 123 GL--KIVNEMASA 133
L K V E +A
Sbjct: 125 DLTAKKVVEYGAA 137
>gi|345491599|ref|XP_001606644.2| PREDICTED: ras-related protein Rab-10-like [Nasonia vitripennis]
Length = 200
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/132 (48%), Positives = 97/132 (73%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTC++ RF+ F +TIG+DF IKTVE+ ++IKLQIWDT
Sbjct: 6 YDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQIWDT 65
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERF +IT SYYR A ++LVYDI+ + TF+ + +WLR I+E+A+ V ++++G S
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVNWLRNIDEHANENVEKMILGNKSD 125
Query: 124 LKIVNEMASAAG 135
++ E+++ G
Sbjct: 126 MEDRREVSTERG 137
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 51/81 (62%), Gaps = 8/81 (9%)
Query: 180 NEACF-----YLASLEGHSN-NIHCMA-RNKIDREDR-EIPTEVGEDFAKRHDMYYLETS 231
NE F +L +++ H+N N+ M NK D EDR E+ TE GE A+ H + ++ETS
Sbjct: 93 NEKTFENIVNWLRNIDEHANENVEKMILGNKSDMEDRREVSTERGEAIAREHGIRFMETS 152
Query: 232 AKASDNVEKLFMQIAAELMEK 252
AKA+ N+++ F ++A +++K
Sbjct: 153 AKANINIDRAFRELAEAILDK 173
>gi|303272717|ref|XP_003055720.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463694|gb|EEH60972.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 204
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TV++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLEGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YA+ V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYANENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|405969917|gb|EKC34860.1| Ras-related protein Rab-1A [Crassostrea gigas]
Length = 205
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 91/120 (75%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAG 65
+LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWDTAG
Sbjct: 10 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAG 69
Query: 66 QERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSGLK 125
QERFR+IT SYYR AH +I+VYD++ Q +F + WL+EI+ YAS V ++LVG S ++
Sbjct: 70 QERFRTITSSYYRGAHGIIVVYDVTDQESFSNVKQWLQEIDRYASENVNKLLVGNKSDME 129
>gi|326506468|dbj|BAJ86552.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326516366|dbj|BAJ92338.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|324518786|gb|ADY47204.1| Ras-related protein Rab-10 [Ascaris suum]
Length = 200
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 88/115 (76%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y FLFK++L+G++GVGKT ++ RFT+ F P +TIG+DF IKT+E+ +RIKLQIWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTSIIHRFTEDAFSPTYISTIGIDFKIKTIEVRGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLV 118
AGQERF +IT SYYR A +++VYDI+ + +FD + WLR IE +AS V ++L+
Sbjct: 65 AGQERFHTITTSYYRGAMGIVVVYDITDEGSFDNIAKWLRYIELHASEDVQKILL 119
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 202 NKIDR-EDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKL 253
NK D E R + +E GE AK H + +LETSA+++ N++K F +A ++ K+
Sbjct: 121 NKCDVIERRAVSSERGEKIAKAHGIKFLETSARSNINIQKAFGDLAEAILNKV 173
>gi|328849559|gb|EGF98737.1| hypothetical protein MELLADRAFT_73536 [Melampsora larici-populina
98AG31]
Length = 204
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y FLF+++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 4 EYDFLFQLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKVVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q TF + WL+EI+ YA V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDTFTNVKQWLQEIDRYACEGVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|348505868|ref|XP_003440482.1| PREDICTED: ras-related protein Rab-8B-like [Oreochromis niloticus]
Length = 207
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ +R+KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDSFNTTFISTIGIDFKIRTIELDGKRVKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI + +F+ + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDICNEKSFENIKNWIRNIEEHASSDVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ L+ +E
Sbjct: 125 MTDRRQVSKDRGEKLAIDYGVKFLETSAKSGLNVEE 160
Score = 39.7 bits (91), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 166 LMVFVAVCIPKLARNEACF-----YLASLEGH-SNNIHCMA-RNKIDREDR-EIPTEVGE 217
+M+ +C NE F ++ ++E H S+++ M NK D DR ++ + GE
Sbjct: 84 IMLVYDIC------NEKSFENIKNWIRNIEEHASSDVEKMILGNKCDMTDRRQVSKDRGE 137
Query: 218 DFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGVGMLTRI 271
A + + +LETSAK+ NVE+ F + +++ L+ K T G G +I
Sbjct: 138 KLAIDYGVKFLETSAKSGLNVEEAFYTMGRDILHNLSSKSTDNSAGGSGKPVKI 191
>gi|299753665|ref|XP_001833414.2| GTP-binding protein ypt1 [Coprinopsis cinerea okayama7#130]
gi|298410405|gb|EAU88348.2| GTP-binding protein ypt1 [Coprinopsis cinerea okayama7#130]
Length = 204
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 89/122 (72%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ TF + WL EI+ YAS V ++LVG S
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQWLSEIDRYASEGVNKLLVGNKS 124
Query: 123 GL 124
L
Sbjct: 125 DL 126
>gi|351723507|ref|NP_001238305.1| uncharacterized protein LOC100306147 [Glycine max]
gi|255627683|gb|ACU14186.1| unknown [Glycine max]
Length = 203
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEDSFNNVKQWLSEIDRYASDNVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|393220275|gb|EJD05761.1| GTP-binding protein ypt1 [Fomitiporia mediterranea MF3/22]
Length = 202
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 90/120 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + +KLQIWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 64
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ T+ + WL+EI+ YAS V ++LVG S
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTYKNVKQWLQEIDRYASDNVNKLLVGNKS 124
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 193 SNNIH-CMARNKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELM 250
S+N++ + NK DR + ++ V +FAK+ + +LETSAK + NVE+ F+ +A E+
Sbjct: 112 SDNVNKLLVGNKSDRTNEKVVEYAVASEFAKQLGIPFLETSAKTALNVEQAFLTMAREIK 171
Query: 251 EKLA 254
E+
Sbjct: 172 ERTG 175
>gi|302692268|ref|XP_003035813.1| small GTP-binding protein [Schizophyllum commune H4-8]
gi|300109509|gb|EFJ00911.1| small GTP-binding protein [Schizophyllum commune H4-8]
Length = 203
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ TF + WL+EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRYASEGVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|145535548|ref|XP_001453507.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833747|emb|CAI39343.1| rab_B22 [Paramecium tetraurelia]
gi|124421229|emb|CAK86110.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 95/134 (70%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
++Y +LFK++L+GN+ VGK+ L+ RF VF TIGVDF I+T ++N + +KLQIW
Sbjct: 5 QEYDYLFKILLIGNSAVGKSSLLLRFADNVFNESFLPTIGVDFKIRTFDLNGKTVKLQIW 64
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERF++IT SYY+ AH +ILVYD++ + +F + +WL E+E+YA+ V+RVLVG
Sbjct: 65 DTAGQERFKTITNSYYKGAHGIILVYDVTDKQSFKDVENWLAEVEKYANENVVRVLVGNK 124
Query: 122 SGLKIVNEMASAAG 135
L+ E+ G
Sbjct: 125 VDLESKREVTFEEG 138
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 185 YLASLEGHSNN--IHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+LA +E ++N + + NK+D E RE+ E G++ A ++ ++ETSAK S NVEK
Sbjct: 104 WLAEVEKYANENVVRVLVGNKVDLESKREVTFEEGKELADSLNIRFIETSAKNSSNVEKA 163
Query: 242 FMQIAAELMEKLAE 255
F+ +A E+ K+A+
Sbjct: 164 FITLANEIKAKVAK 177
>gi|148694184|gb|EDL26131.1| RAB8B, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 192
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILG 120
>gi|327287404|ref|XP_003228419.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 212
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 89/122 (72%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELEGRTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + W+ EI YAS V +++VG S
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNMHLWMEEINRYASENVNKLIVGNKS 126
Query: 123 GL 124
L
Sbjct: 127 DL 128
>gi|327286112|ref|XP_003227775.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 138
Score = 143 bits (360), Expect = 4e-31, Method: Composition-based stats.
Identities = 64/122 (52%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +++ + WL+EIE YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIERYASENVNKLLVGNKC 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|225710014|gb|ACO10853.1| Ras-related protein ORAB-1 [Caligus rogercresseyi]
Length = 201
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 90/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ L WL+EI+ YA V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKVWLQEIDRYACENVNKLLVG 120
>gi|324506590|gb|ADY42810.1| Ras-related protein Rab-1A [Ascaris suum]
Length = 202
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 90/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYDI+ Q +F+ + WL+EI+ YA V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQWLQEIDRYACENVNKLLVG 120
>gi|403222703|dbj|BAM40834.1| Ras-related protein Rab-1 [Theileria orientalis strain Shintoku]
Length = 220
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 92/120 (76%), Gaps = 1/120 (0%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
M++Y +LFK++++G++G GK+ L+ RF + +TIGVDF IKTV+I+N IKLQI
Sbjct: 1 MKEYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTD-WLREIEEYASFKVLRVLVG 119
WDTAGQERFR+IT +YYR AH +I VYD++ + +FD +T WL++I++YA+ V ++L+G
Sbjct: 61 WDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITQTWLQDIDKYATSNVCKLLIG 120
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 193 SNNIHCMARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELME 251
SN + NKID E+R + TE + A++++M Y+E SAK NVEK F+ IA L +
Sbjct: 112 SNVCKLLIGNKIDLAENRVVSTEEAKHVAEQNNMNYIEASAKTDSNVEKAFITIAKALKD 171
Query: 252 KLAE 255
++ +
Sbjct: 172 RVTQ 175
>gi|324521795|gb|ADY47928.1| Ras-related protein Rab-8B [Ascaris suum]
Length = 223
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 92/116 (79%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF+ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 19 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIEVDGKKIKLQIWDT 78
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 79 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVDRMIIG 134
>gi|410908022|ref|XP_003967490.1| PREDICTED: ras-related protein Rab-8B-like [Takifugu rubripes]
Length = 207
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ +R+KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDSFNTTFISTIGIDFKIRTIELDGKRVKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYD S + +F+ + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDTSNEKSFENIKNWIRNIEEHASSDVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ L+ +E
Sbjct: 125 MTDRRQVSKDRGEKLAIDYGVKFMETSAKSGLNVEE 160
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 11/95 (11%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDREDR-EIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D DR ++ + GE A + + ++ETS
Sbjct: 92 NEKSFENIKNWIRNIEEHASSDVEKMILGNKCDMTDRRQVSKDRGEKLAIDYGVKFMETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGVG 266
AK+ NVE+ F +A +++ L+ K T D G G
Sbjct: 152 AKSGLNVEEAFYTMARDILHNLSSKTT---DSGAG 183
>gi|354482851|ref|XP_003503609.1| PREDICTED: ras-related protein Rab-43-like [Cricetulus griseus]
Length = 203
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 105/162 (64%), Gaps = 14/162 (8%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y+F +VL G VGKTC+V+RF GVF QG+TIGVDF +KT+EI +R+KLQIWDT
Sbjct: 7 YRFRL-LVLGGEESVGKTCVVQRFKTGVFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDT 65
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+ITQSYYRSA+ IL YDI+ + TF + W+ ++ +YA ++++L+G S
Sbjct: 66 AGQERFRTITQSYYRSANGAILAYDITKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSD 125
Query: 124 LKIVNE--------MASAAGLLCTVDPALATALASDKTDLDE 157
L E +A +LC ++ + A D ++++E
Sbjct: 126 LADFREVPLTEAQSLAEHYDILCAIETS-----AKDSSNVEE 162
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 193 SNNIHCMARNKIDRED-REIPTEVGEDFAKRHDMY-YLETSAKASDNVEKLFMQIAAELM 250
SN + + NK D D RE+P + A+ +D+ +ETSAK S NVE+ F ++A EL+
Sbjct: 113 SNIVQLLIGNKSDLADFREVPLTEAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATELI 172
>gi|289742273|gb|ADD19884.1| Rab protein 8 [Glossina morsitans morsitans]
Length = 207
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 107/159 (67%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +F+ + +W+R IEE AS V ++L+G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVL 162
L +++ G V+ + S K ++ +E L
Sbjct: 125 LNEKRQVSRERGEQLAVEYGIKFMETSAKASINVEEAFL 163
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 35/51 (68%)
Query: 207 EDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
E R++ E GE A + + ++ETSAKAS NVE+ F+ +A+++ K+ +++
Sbjct: 127 EKRQVSRERGEQLAVEYGIKFMETSAKASINVEEAFLTLASDIKAKMEKRM 177
>gi|225710322|gb|ACO11007.1| Ras-related protein Rab-8A [Caligus rogercresseyi]
Length = 212
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMILG 120
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 202 NKIDREDRE-IPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLT-- 258
NK D DR + E GE+ A + + ++ETSAK++ NVE+ F +A ++ K+ ++L
Sbjct: 121 NKCDMNDRRNVTKEKGEELAIEYGIKFMETSAKSATNVEEAFFTLARDIKAKMEKRLQEA 180
Query: 259 ---IMHDRG 264
HDRG
Sbjct: 181 SNPPRHDRG 189
>gi|410045431|ref|XP_003313192.2| PREDICTED: ras-related protein Rab-1B isoform 2 [Pan troglodytes]
Length = 269
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 72 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 131
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S
Sbjct: 132 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 191
Query: 123 GL 124
L
Sbjct: 192 DL 193
>gi|410923995|ref|XP_003975467.1| PREDICTED: ras-related protein Rab-8A-like [Takifugu rubripes]
Length = 222
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 21 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 80
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 81 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMVLG 136
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D D R++ + GE A + + ++ETSAKA+ NVE F+ +A ++ K+ KL
Sbjct: 137 NKCDINDKRQVSKDRGEQLALDYGIKFMETSAKANINVENAFLTLARDIKSKMDTKL 193
>gi|301764549|ref|XP_002917698.1| PREDICTED: ras-related protein Rab-43-like [Ailuropoda melanoleuca]
Length = 218
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 105/156 (67%), Gaps = 13/156 (8%)
Query: 10 VVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAGQERF 69
+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIWDTAGQERF
Sbjct: 27 LVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERF 86
Query: 70 RSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSGLKIVNE 129
R+ITQSYYRSA+ IL YDI+ + +F + W+ ++ +YA ++++L+G S L + E
Sbjct: 87 RTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELRE 146
Query: 130 MASAAG--------LLCTVDPALATALASDKTDLDE 157
+ A +LC ++ + A D ++++E
Sbjct: 147 VPLAEAQSLVEHYDILCAIETS-----AKDSSNVEE 177
Score = 39.3 bits (90), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 193 SNNIHCMARNKID-REDREIPTEVGEDFAKRHDMY-YLETSAKASDNVEKLFMQIAAELM 250
SN + + NK D E RE+P + + +D+ +ETSAK S NVE+ F+++A EL+
Sbjct: 128 SNIVQLLIGNKSDLSELREVPLAEAQSLVEHYDILCAIETSAKDSSNVEEAFVRVATELV 187
Query: 251 EK-----LAEKLT 258
+ L+EK T
Sbjct: 188 VRHGGPLLSEKGT 200
>gi|291220707|ref|XP_002730366.1| PREDICTED: RAB10, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 200
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 88/116 (75%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTC++ RF+ F +TIG+DF IKTVE+ ++IKLQIWDT
Sbjct: 6 YDLLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERF +IT SYYR A ++LVYDI+ TFD +T WLR I+E+A+ V R+L+G
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITQPKTFDNITKWLRNIDEHANEDVERMLLG 121
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 166 LMVFVAVCIPKLARNEACFYLASLEGHSNNI--HCMARNKIDRED-REIPTEVGEDFAKR 222
+M+ + PK N +L +++ H+N + NK D ED R IP E GE A+
Sbjct: 85 IMLVYDITQPKTFDN-ITKWLRNIDEHANEDVERMLLGNKCDMEDKRMIPKERGESIARE 143
Query: 223 HDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
H + +LETSAK++ NVEK FM +A +++ K +K
Sbjct: 144 HGIKFLETSAKSNVNVEKAFMTLAEDILRKTPQK 177
>gi|402892814|ref|XP_003909603.1| PREDICTED: ras-related protein Rab-1B [Papio anubis]
Length = 264
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 67 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 126
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S
Sbjct: 127 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 186
Query: 123 GL 124
L
Sbjct: 187 DL 188
>gi|290982368|ref|XP_002673902.1| rab family small GTPase [Naegleria gruberi]
gi|284087489|gb|EFC41158.1| rab family small GTPase [Naegleria gruberi]
Length = 203
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 89/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR++T SYYR AH +I+VYD++ Q +F + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTMTSSYYRGAHGIIIVYDVTDQDSFSNVKQWLSEIDRYASDNVNKLLVG 120
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 193 SNNIH-CMARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELM 250
S+N++ + NK D +++ E+FAK ++ +LETSAK S NVE+ FM +AAE+
Sbjct: 111 SDNVNKLLVGNKCDLTSKKQVDRSTAEEFAKSLNIPFLETSAKISTNVEQAFMTMAAEIK 170
Query: 251 EKLA-EKLTIMHDRGVGM 267
+LA + +T +G+
Sbjct: 171 NRLASQPITTQQQPSLGI 188
>gi|26341800|dbj|BAC34562.1| unnamed protein product [Mus musculus]
Length = 191
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILG 120
>gi|126338784|ref|XP_001365286.1| PREDICTED: ras-related protein Rab-1B-like [Monodelphis domestica]
Length = 201
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q ++ + WL EI YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLEEINRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|116793841|gb|ABK26899.1| unknown [Picea sitchensis]
gi|224286684|gb|ACN41045.1| unknown [Picea sitchensis]
Length = 203
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 105/159 (66%), Gaps = 6/159 (3%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFKV+LVG++ VGK+CL+ RFT+ + +TIGVDF IKTVE++ + IK QIWD
Sbjct: 5 EYDYLFKVLLVGDSSVGKSCLLLRFTEDSYMESYISTIGVDFKIKTVELDGKTIKFQIWD 64
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERF+++T SYYR AH +I+VYDI+ +FD + WL EIE Y S V +LVG
Sbjct: 65 TAGQERFKTVTSSYYRGAHGIIIVYDITDMDSFDHVKHWLTEIERYTSDNVNMILVGNKC 124
Query: 123 GL----KIVNEMASAAGLLCTVDPALATALASDKTDLDE 157
L + +MA A + P L T+ A D T++++
Sbjct: 125 DLAEKRAVEQQMAKAFANDVGI-PFLETS-AKDATNVEQ 161
>gi|388511969|gb|AFK44046.1| unknown [Lotus japonicus]
Length = 202
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDAKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|357612732|gb|EHJ68147.1| hypothetical protein KGM_14978 [Danaus plexippus]
Length = 217
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 88/123 (71%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E + +LFK+VL+G+ G GKTC+V+R G F G TIGVDF +KT+ ++ +R+KLQIW
Sbjct: 15 EQFDYLFKIVLIGDCGTGKTCIVQRLKSGNFIERHGNTIGVDFSMKTLIVDGKRVKLQIW 74
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ +I+VYDI+ + TF + W+ E+ Y S V+ L+G
Sbjct: 75 DTAGQERFRTITQSYYRSANGVIIVYDITKRSTFLSIQKWIEEVRRYTSSNVIVSLIGNK 134
Query: 122 SGL 124
L
Sbjct: 135 CDL 137
>gi|1370198|emb|CAA98176.1| RAB8E [Lotus japonicus]
Length = 215
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+ IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIHNIEQHASDNVNKILVG 127
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIHNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LA+
Sbjct: 169 VFFSIARDIKQRLAD 183
>gi|116782376|gb|ABK22484.1| unknown [Picea sitchensis]
Length = 202
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 90/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYVDSYISTIGVDFKIRTIELDGKAIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ +F+ + WL EI++YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQWLSEIDKYASDNVSKLLVG 120
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 193 SNNI-HCMARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELM 250
S+N+ + NK D E R + ++ + FA + +LETSAK + NVE+ F+ +A E+
Sbjct: 111 SDNVSKLLVGNKCDMAEKRVVDQQMAKSFADELGIPFLETSAKDASNVEQAFITMAGEVK 170
Query: 251 EKLAEKLT 258
++A +LT
Sbjct: 171 RRMASQLT 178
>gi|390979747|gb|AFM30910.1| small GTPase [Hevea brasiliensis]
Length = 203
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|442755463|gb|JAA69891.1| Putative gtpase rab1/ypt1 small g protein superfamily [Ixodes
ricinus]
Length = 253
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+ YD++ Q +F+ + WL+EI+ YA V ++LVG S
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKS 126
Query: 123 GL 124
L
Sbjct: 127 DL 128
>gi|225712878|gb|ACO12285.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 89/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ L WL+EI YA V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIARYACENVNKLLVG 120
>gi|32401324|gb|AAP80834.1| GTP-binding protein [Griffithsia japonica]
Length = 154
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 90/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +L+K +L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLYKNLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ +AS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKSWLQEIDRFASEHVCKLLVG 120
>gi|431910239|gb|ELK13312.1| Ras-related protein Rab-1B [Pteropus alecto]
Length = 247
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|340506305|gb|EGR32473.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 211
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+GN+GVGK+C++ RF++ F TIGVDF IKT+++N + IKLQIWD
Sbjct: 8 EYDYLFKLLLIGNSGVGKSCMLMRFSENQFTNNFYNTIGVDFKIKTIQLNGKNIKLQIWD 67
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQ+RF++IT SYYR AH + +V+DI+ + +F+ + W+ EIE+YA V R+LVG +
Sbjct: 68 TAGQDRFKTITCSYYRGAHGIAVVFDITDKQSFENVKGWMVEIEKYAQENVCRILVGNKT 127
Query: 123 GL 124
+
Sbjct: 128 DM 129
>gi|328768042|gb|EGF78089.1| hypothetical protein BATDEDRAFT_90991 [Batrachochytrium
dendrobatidis JAM81]
Length = 241
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 98/137 (71%), Gaps = 5/137 (3%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAG 65
+LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWDTAG
Sbjct: 45 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAG 104
Query: 66 QERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSGL- 124
QERFR+IT SYYR AH +I+VYD++ Q TF+ + WL+EI+ +AS V ++LVG S L
Sbjct: 105 QERFRTITSSYYRGAHGIIVVYDVTDQETFNNVKQWLQEIDRFASEGVHKLLVGNKSDLE 164
Query: 125 --KIVNEMASAAGLLCT 139
K+V+ A AG T
Sbjct: 165 TKKVVD--AKTAGEFAT 179
>gi|350534422|ref|NP_001234140.1| ethylene-responsive small GTP-binding protein [Solanum
lycopersicum]
gi|5669640|gb|AAD46405.1|AF096249_1 ethylene-responsive small GTP-binding protein [Solanum
lycopersicum]
Length = 216
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSLTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQ 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LA+
Sbjct: 169 VFFSIARDIKQRLAD 183
>gi|357135226|ref|XP_003569212.1| PREDICTED: ras-related protein RIC1-like [Brachypodium distachyon]
Length = 203
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 89/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 202 NKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
NK D E R + E G+ A + +LETSAK + NVEK FM +AAE+ ++A +
Sbjct: 121 NKCDLAESRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAAEIKNRMASQ 176
>gi|168049674|ref|XP_001777287.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162671389|gb|EDQ57942.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 215
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 93/118 (78%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
++Y +L K++L+G++GVGK+CL+ RF+ F TIG+DF I+T+E++N+RIKLQIW
Sbjct: 8 DNYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDNKRIKLQIW 67
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 68 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 125
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 185 YLASLEGHS----NNIHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H+ N I + +D R +P G+ A + + + ETSAK + NVE
Sbjct: 107 WIRNIEQHASDNVNKILVGNKADMDPSKRAVPFAKGQALADEYGIKFFETSAKTNMNVED 166
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ +LAE
Sbjct: 167 VFFTIARDIKTRLAE 181
>gi|145348815|ref|XP_001418839.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|308805733|ref|XP_003080178.1| YptC1 (ISS) [Ostreococcus tauri]
gi|116058638|emb|CAL54345.1| YptC1 (ISS) [Ostreococcus tauri]
gi|144579069|gb|ABO97132.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 203
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE+ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTGTYISTIGVDFKIRTVELEGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ +F+ + WL EI+ YA+ V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDMESFEAVKGWLNEIDRYANENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|83771518|dbj|BAE61650.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 248
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 137/251 (54%), Gaps = 51/251 (20%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + +KLQIWDT
Sbjct: 22 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 81
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT SYYR AH + +VYD++ +F+ + WL+EI+ YA+ V ++LVG
Sbjct: 82 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVG---- 137
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNEAC 183
+K+D+ ED+ V+ VC +
Sbjct: 138 ---------------------------NKSDM-EDKKVVE---YTVAKVC------SSLY 160
Query: 184 FYLASLEGHSNNIHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFM 243
+ SLE ++ AR I R I +FA + +LETSAK + NVE+ F+
Sbjct: 161 LFPYSLEQTTSAFPQSARRLI----RYI------EFADSLGIPFLETSAKNASNVEQAFL 210
Query: 244 QIAAELMEKLA 254
+A ++ E++
Sbjct: 211 TMARQIKERMG 221
>gi|388518593|gb|AFK47358.1| unknown [Medicago truncatula]
Length = 216
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+I +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTIITAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LA+
Sbjct: 169 VFFSIARDIKQRLAD 183
>gi|147900245|ref|NP_001090134.1| ras-related protein Rab-19 [Xenopus laevis]
gi|123898987|sp|Q32NQ0.1|RAB19_XENLA RecName: Full=Ras-related protein Rab-19
gi|80476372|gb|AAI08533.1| MGC130981 protein [Xenopus laevis]
Length = 213
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 91/123 (73%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ + FLFK++L+G++ VGKTC+V RF G+F Q TIGVDF ++++ IN +++K+Q+W
Sbjct: 10 DPFDFLFKIILIGDSNVGKTCVVHRFQSGIFMDNQQNTIGVDFTVRSLNINGKKVKVQVW 69
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAH I+ YDI+ + +F+ + W+ E +Y + ++ +L+G
Sbjct: 70 DTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYEAGKYGAANLMLMLMGNK 129
Query: 122 SGL 124
S L
Sbjct: 130 SDL 132
>gi|326634496|pdb|3QBT|A Chain A, Crystal Structure Of Ocrl1 540-678 In Complex With
Rab8a:gppnhp
gi|326634497|pdb|3QBT|C Chain C, Crystal Structure Of Ocrl1 540-678 In Complex With
Rab8a:gppnhp
gi|326634498|pdb|3QBT|E Chain E, Crystal Structure Of Ocrl1 540-678 In Complex With
Rab8a:gppnhp
gi|326634499|pdb|3QBT|G Chain G, Crystal Structure Of Ocrl1 540-678 In Complex With
Rab8a:gppnhp
gi|355333142|pdb|3TNF|A Chain A, Lida From Legionella In Complex With Active Rab8a
Length = 174
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 92/114 (80%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAG 65
+LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDTAG
Sbjct: 5 YLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAG 64
Query: 66 QERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
QERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 QERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 118
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
NK D D R++ E GE A + + ++ETSAKA+ NVE F +A ++ K+ +K
Sbjct: 119 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKK 174
>gi|4586580|dbj|BAA76422.1| rab-type small GTP-binding protein [Cicer arietinum]
Length = 202
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|388504478|gb|AFK40305.1| unknown [Lotus japonicus]
Length = 215
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+ IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIHNIEQHASDNVNKILVG 127
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NV +
Sbjct: 109 WIHNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LA+
Sbjct: 169 VFFSIARDIKQRLAD 183
>gi|156383922|ref|XP_001633081.1| predicted protein [Nematostella vectensis]
gi|156220146|gb|EDO41018.1| predicted protein [Nematostella vectensis]
Length = 206
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y FLFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ +F+ + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNDKSFENIKNWIRNIEEHASQDVEKMVLGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
++ +++ G V+ + S K ++ +E
Sbjct: 125 MEDRRQVSKERGEQLAVEYGIKFMETSAKASINVEE 160
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 185 YLASLEGH-SNNIHCMA-RNKIDREDR-EIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
++ ++E H S ++ M NK D EDR ++ E GE A + + ++ETSAKAS NVE+
Sbjct: 102 WIRNIEEHASQDVEKMVLGNKCDMEDRRQVSKERGEQLAVEYGIKFMETSAKASINVEEA 161
Query: 242 FMQIAAELMEKLAEKL 257
F +A ++ K+ +KL
Sbjct: 162 FFTLARDIKLKMDKKL 177
>gi|349804657|gb|AEQ17801.1| putative c chain of rab8 [Hymenochirus curtipes]
Length = 124
Score = 142 bits (359), Expect = 5e-31, Method: Composition-based stats.
Identities = 62/116 (53%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMILG 120
>gi|328725761|ref|XP_001950584.2| PREDICTED: ras-related protein Rab-8A-like [Acyrthosiphon pisum]
Length = 225
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 109/162 (67%), Gaps = 2/162 (1%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIEMDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYD++ + +FD + +W+R IEE AS V ++L+G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNEKSFDNIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE--HVLA 163
L +++ G V+ + S K ++ +E H LA
Sbjct: 125 LNSGRQVSKERGEQLAVEYGIKFMETSAKASVNVEEAFHTLA 166
>gi|50550177|ref|XP_502561.1| YALI0D08162p [Yarrowia lipolytica]
gi|49648429|emb|CAG80749.1| YALI0D08162p [Yarrowia lipolytica CLIB122]
Length = 202
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 89/120 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTLELEGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q TF+ + W EI+ YA+ V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDTFNNVKTWFHEIDRYATEGVNKLLVGNKS 123
>gi|149028911|gb|EDL84252.1| RAB8B, member RAS oncogene family, isoform CRA_b [Rattus
norvegicus]
Length = 175
Score = 142 bits (359), Expect = 5e-31, Method: Composition-based stats.
Identities = 62/116 (53%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILG 120
>gi|388495854|gb|AFK35993.1| unknown [Medicago truncatula]
Length = 216
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GV K+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVSKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + N+E+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNMEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LA+
Sbjct: 169 VFFSIARDIKQRLAD 183
>gi|357440495|ref|XP_003590525.1| Ras-like protein [Medicago truncatula]
gi|355479573|gb|AES60776.1| Ras-like protein [Medicago truncatula]
Length = 197
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 92/118 (77%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIW
Sbjct: 10 SDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVG 127
>gi|313242103|emb|CBY34279.1| unnamed protein product [Oikopleura dioica]
Length = 213
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 90/119 (75%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
++D LFK++L+G++GVGKTC++ RF+ F +TIG+DF IKTVE+ ++IKLQI
Sbjct: 10 IQDNHLLFKLLLIGDSGVGKTCVLFRFSDDTFNTTFISTIGIDFKIKTVELQGKKIKLQI 69
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERF +IT SYYR A+ ++LVYDI+ TFD ++ WLR I E+AS V R+L+G
Sbjct: 70 WDTAGQERFHTITTSYYRGANGILLVYDITQPKTFDNISKWLRNINEHASEDVERMLIG 128
>gi|116782525|gb|ABK22540.1| unknown [Picea sitchensis]
gi|116784933|gb|ABK23527.1| unknown [Picea sitchensis]
gi|224284724|gb|ACN40093.1| unknown [Picea sitchensis]
Length = 202
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|403177656|ref|XP_003336121.2| GTP-binding protein ypt1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375172961|gb|EFP91702.2| GTP-binding protein ypt1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 240
Score = 142 bits (359), Expect = 6e-31, Method: Composition-based stats.
Identities = 65/122 (53%), Positives = 89/122 (72%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 40 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELEGKTVKLQIWD 99
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q TF + WL EI+ YA V ++LVG S
Sbjct: 100 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDTFTNVKQWLHEIDRYACEGVNKLLVGNKS 159
Query: 123 GL 124
L
Sbjct: 160 DL 161
>gi|449279645|gb|EMC87180.1| Ras-related protein Rab-1A, partial [Columba livia]
Length = 197
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 62/114 (54%), Positives = 89/114 (78%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAG 65
+LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWDTAG
Sbjct: 2 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAG 61
Query: 66 QERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
QERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 62 QERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 115
>gi|212275502|ref|NP_001130744.1| Ras protein RIC1 [Zea mays]
gi|194690000|gb|ACF79084.1| unknown [Zea mays]
gi|195605598|gb|ACG24629.1| ras-related protein RIC1 [Zea mays]
gi|195606872|gb|ACG25266.1| ras-related protein RIC1 [Zea mays]
gi|223942789|gb|ACN25478.1| unknown [Zea mays]
gi|413950363|gb|AFW83012.1| Ras protein RIC1 [Zea mays]
Length = 203
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 106/158 (67%), Gaps = 4/158 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 123 GLKIVNEMASAAGLLCTVD---PALATALASDKTDLDE 157
L ++ AG D P L T+ A D T++++
Sbjct: 124 DLAENRVVSYEAGKALADDIGIPFLETS-AKDATNVEK 160
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 199 MARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
+ NK D E+R + E G+ A + +LETSAK + NVEK FM +A E+ ++A +
Sbjct: 118 LVGNKCDLAENRVVSYEAGKALADDIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQ 176
>gi|348504692|ref|XP_003439895.1| PREDICTED: ras-related protein Rab-8A-like [Oreochromis niloticus]
Length = 206
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +F+ + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASADVERMVLG 120
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK D D R++ E GE A + + ++ETSAKA+ NVE F+ +A ++ K+ +KL
Sbjct: 121 NKCDVNDKRQVSKERGEKLALEYGIKFMETSAKANINVENAFLTLARDIKAKMDKKLEGN 180
Query: 261 HDRGVGMLTRI 271
+ +G +I
Sbjct: 181 NPQGSNQGVKI 191
>gi|87295018|gb|ABD36921.1| Rab1 [Pinus pinaster]
Length = 202
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 90/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYVGSYISTIGVDFKIRTIELDGKAIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ +F+ + WL EI++YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQWLSEIDKYASDNVSKLLVG 120
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 193 SNNI-HCMARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELM 250
S+N+ + NK D E + + ++ + FA + +LETSAK + NVE+ F+ +A E+
Sbjct: 111 SDNVSKLLVGNKCDLTEKQAVDQQMAKSFADELGIPFLETSAKDASNVEQAFLTMAGEVK 170
Query: 251 EKLAEKLT 258
++A +LT
Sbjct: 171 RRMASQLT 178
>gi|115437604|ref|NP_001043336.1| Os01g0558600 [Oryza sativa Japonica Group]
gi|109940139|sp|P40392.2|RIC1_ORYSJ RecName: Full=Ras-related protein RIC1
gi|57899331|dbj|BAD87942.1| Ras-related protein RIC1 [Oryza sativa Japonica Group]
gi|57900421|dbj|BAD87657.1| Ras-related protein RIC1 [Oryza sativa Japonica Group]
gi|113532867|dbj|BAF05250.1| Os01g0558600 [Oryza sativa Japonica Group]
gi|125526416|gb|EAY74530.1| hypothetical protein OsI_02420 [Oryza sativa Indica Group]
gi|125570818|gb|EAZ12333.1| hypothetical protein OsJ_02222 [Oryza sativa Japonica Group]
gi|215769435|dbj|BAH01664.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 202
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 89/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Score = 42.4 bits (98), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 199 MARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
+ NK D E+R + E G+ A + +LETSAK + NVEK FM +A E+ ++A +
Sbjct: 118 LVGNKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQ 176
>gi|89258407|gb|ABD65427.1| Rab1 [Suberites domuncula]
Length = 205
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 90/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR A+ +I+VYD++ Q +F + WL+EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGANGIIIVYDVTDQESFTNVKTWLQEIDRYASTNVSKLLVG 120
>gi|192910784|gb|ACF06500.1| Ras-related protein RIC1 [Elaeis guineensis]
Length = 202
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKC 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 193 SNNIH-CMARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELM 250
S+N++ + NK D +R + E G+ FA + +LETSAK + NVEK FM +AAE+
Sbjct: 111 SDNVNKLLVGNKCDLAANRVVSYETGKAFADEIGIPFLETSAKDATNVEKAFMTMAAEIK 170
Query: 251 EKLAEKLTIMHDR 263
++A + + R
Sbjct: 171 NRMASQPAMNASR 183
>gi|166235969|gb|ABY85791.1| GTPase Rab1 [Larix kaempferi]
Length = 203
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 90/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYVDSYISTIGVDFKIRTIELDGKAIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ +F+ + WL EI++YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQWLSEIDKYASDSVSKLLVG 120
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 199 MARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
+ NK D E R + ++ + FA + +LETSAK + NVE+ F+ +A E+ ++A +L
Sbjct: 118 LVGNKCDMTEKRVVDQQMAKSFADELGIPFLETSAKDASNVEQAFLTMAGEVKRRMASQL 177
Query: 258 T 258
T
Sbjct: 178 T 178
>gi|168027125|ref|XP_001766081.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162682724|gb|EDQ69140.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNMNVED 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LAE
Sbjct: 169 VFFTIARDIKQRLAE 183
>gi|168028754|ref|XP_001766892.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681871|gb|EDQ68294.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNMNVED 168
Query: 241 LFMQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLS 289
+F IA ++ ++LAE + ++K G+A++KP+ S
Sbjct: 169 VFFTIARDIKQRLAES----DSKPEAAKDAKPDVKLLAGNAQTKPASAS 213
>gi|1370194|emb|CAA98174.1| RAB8C [Lotus japonicus]
Length = 212
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQER R+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERVRTITTAYYRGAKGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LA+
Sbjct: 169 VFFSIARDIKQRLAD 183
>gi|168033669|ref|XP_001769337.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162679443|gb|EDQ65891.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 215
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 93/118 (78%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
++Y +L K++L+G++GVGK+CL+ RF+ F TIG+DF I+T+E++N+RIKLQIW
Sbjct: 8 DNYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDNKRIKLQIW 67
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 68 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 125
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 185 YLASLEGHS----NNIHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H+ N I + +D R +P G+ A + + + ETSAK + NVE
Sbjct: 107 WIRNIEQHASDNVNKILVGNKADMDPSKRAVPFAKGQALADEYGIKFFETSAKTNMNVED 166
Query: 241 LFMQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPS 286
+F IA ++ +LAE + + G ++ G A+ KP+
Sbjct: 167 VFFTIARDIKTRLAESDSKPEAKNAGGKP---DVTLKSGGAQPKPA 209
>gi|170587434|ref|XP_001898481.1| Membrane-associated protein gex-3 [Brugia malayi]
gi|158594105|gb|EDP32695.1| Membrane-associated protein gex-3, putative [Brugia malayi]
Length = 1129
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 102/162 (62%), Gaps = 3/162 (1%)
Query: 391 RKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFA 450
++K N ++ PG ES+R +R+ LT DKL AL ELC A+ + V D FA
Sbjct: 641 KQKSNKNSNTARSLVMPGEESFRCSRDALTLADKLQTALHELCSAVTSSKQVVVSDHVFA 700
Query: 451 PREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTR 510
PREYL Q LES+ ++++ ++ + +P +LLAS+ A+M VLQ ++ V +D+TR
Sbjct: 701 PREYLAQQLESQLTQSIQALI---SSSEHPMRPCQLLASINAHMIVLQNLDTIVTLDVTR 757
Query: 511 VFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
+FNN LLQQTQ D HG T+ ++Y +WY EV+LRR+S Q+
Sbjct: 758 LFNNVLLQQTQYQDYHGNDTLTSIYTKWYLEVVLRRMSTGQI 799
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/94 (64%), Positives = 74/94 (78%), Gaps = 4/94 (4%)
Query: 252 KLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS 311
K+AEKL I++DR VGMLTR+YNIKKACGD KSKP FLS+KSLE CIK IV+KFP +D +S
Sbjct: 11 KIAEKLIILNDRAVGMLTRLYNIKKACGDPKSKPHFLSEKSLEGCIKHIVRKFPIVDARS 70
Query: 312 VSG----ISQIRSDIVKSLSLYYYTFVDLLHFKD 341
S ++ I+ +I+KSLSLYY TF DLL KD
Sbjct: 71 SSTLFHQVTLIKQEILKSLSLYYCTFADLLDLKD 104
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
Query: 566 VENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSLNQR 625
++ V +D+TR+FNN LLQQTQ D HG T+ ++Y +WY EV+LRR+S G I FS +
Sbjct: 747 LDTIVTLDVTRLFNNVLLQQTQYQDYHGNDTLTSIYTKWYLEVVLRRMSTGQILFSPHFA 806
Query: 626 AFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
A ++ + F+ ++++D ELRAL+ L+GPYG+K ++E
Sbjct: 807 ALIA-NPDYQQTFSPDQYTDNRELRALSLLLGPYGVKTMSE 846
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 123 GLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEH-VLACLLMVFVAVCIPKLARNE 181
L +++E+ A G+ VD AL A+ + + DEH L+CLL+VF+A+ +P+LA +
Sbjct: 956 NLLMLSELCMAVGISTDVDIALVHAIRAQTKQTEPDEHYTLSCLLLVFIALSLPRLALTQ 1015
Query: 182 ACFYLASLEGHSNNIHCMA 200
Y ASL NN+ C+A
Sbjct: 1016 NSQYSASLLASKNNLQCIA 1034
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 32/42 (76%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIP 710
L FNAA+E+ + QS+ FPRLGQMI++Y+ P KKL+E+ P
Sbjct: 156 LGLFNAAYELSNGQSEPTFPRLGQMIIEYDNPWKKLTEDLGP 197
>gi|326493844|dbj|BAJ85384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 89/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 199 MARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
+ NK D E R + E G+ A + +LETSAK + NVEK FM +AAE+ ++A +
Sbjct: 118 LVGNKCDLAESRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAAEIKNRMASQ 176
>gi|339248933|ref|XP_003373454.1| GTP-binding protein Ypt2 [Trichinella spiralis]
gi|316970427|gb|EFV54365.1| GTP-binding protein Ypt2 [Trichinella spiralis]
Length = 178
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 92/116 (79%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y FLFK++L+G++GVGKTCL+ RF + F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCLLFRFAEDSFNNTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVY+I+ + +F+ + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITNAYYRGAMGILLVYEITNEKSFENIKNWVRNIEEHASANVEKIILG 120
>gi|156381354|ref|XP_001632230.1| predicted protein [Nematostella vectensis]
gi|156219283|gb|EDO40167.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 90/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYACENVNKLLVG 123
>gi|219126122|ref|XP_002183313.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405069|gb|EEC45013.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 203
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEQDQKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ +F+ + WL EI+ YA+ V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDAESFNNVKQWLHEIDRYAAENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 31/45 (68%)
Query: 209 REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKL 253
R + TE G++FA + +LETSAK S NVE+ F+ +A+++ ++
Sbjct: 129 RVVSTEQGKEFADSLGIEFLETSAKTSSNVEQAFLTMASQIKARM 173
>gi|432607|gb|AAB28535.1| ras-related GTP binding protein possessing GTPase activity [Oryza
sativa]
Length = 202
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 89/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 199 MARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
+ NK D E+R + E G+ A + +LETSAK + NVEK FM +A E+ ++A +
Sbjct: 118 LVGNKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQ 176
>gi|413932609|gb|AFW67160.1| hypothetical protein ZEAMMB73_060765 [Zea mays]
Length = 180
Score = 142 bits (358), Expect = 6e-31, Method: Composition-based stats.
Identities = 62/122 (50%), Positives = 94/122 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+TVE++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG +
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 123 GL 124
+
Sbjct: 131 DM 132
>gi|218191283|gb|EEC73710.1| hypothetical protein OsI_08312 [Oryza sativa Indica Group]
Length = 206
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 89/119 (74%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAG 65
+LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWDTAG
Sbjct: 10 YLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAG 69
Query: 66 QERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSGL 124
QERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S L
Sbjct: 70 QERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDL 128
>gi|449461253|ref|XP_004148356.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
gi|449505222|ref|XP_004162409.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
Length = 202
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|410905643|ref|XP_003966301.1| PREDICTED: ras-related protein Rab-13-like [Takifugu rubripes]
Length = 200
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 108/160 (67%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y FLFK++L+G++GVGKTCL+ RF + F +TIG+DF +KT++++ +++KLQ+WDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIDVDGKKVKLQVWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERF++IT +YYR A +ILVYDI+ + +F+ + +W++ I+E AS V R+L+G
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVSRMLLGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLA 163
++ +++ G D + S K+ ++ +E L+
Sbjct: 125 IEAKRKVSKETGEKLAKDHGIRFFETSAKSSINVEESFLS 164
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 202 NKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
NK D E R++ E GE AK H + + ETSAK+S NVE+ F+ +A ++++K ++K
Sbjct: 121 NKCDIEAKRKVSKETGEKLAKDHGIRFFETSAKSSINVEESFLSLAHDILQKSSKK 176
>gi|356563370|ref|XP_003549937.1| PREDICTED: GTP-binding protein YPTM2-like isoform 1 [Glycine max]
Length = 202
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|346467487|gb|AEO33588.1| hypothetical protein [Amblyomma maculatum]
Length = 228
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 89/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 41 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 100
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 101 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVG 157
>gi|351714035|gb|EHB16954.1| Ras-related protein Rab-1A, partial [Heterocephalus glaber]
Length = 198
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 62/114 (54%), Positives = 89/114 (78%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAG 65
+LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWDTAG
Sbjct: 3 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAG 62
Query: 66 QERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
QERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 63 QERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 116
>gi|431912641|gb|ELK14659.1| Ras-related protein Rab-1A, partial [Pteropus alecto]
Length = 197
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 62/114 (54%), Positives = 89/114 (78%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAG 65
+LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWDTAG
Sbjct: 2 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAG 61
Query: 66 QERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
QERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 62 QERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 115
>gi|300124329|gb|ADJ68051.1| Rab protein [Larimichthys crocea]
Length = 207
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 92/116 (79%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y + FK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYWFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVERMVLG 120
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK D D R++ + GE A + + ++ETSAKA+ NVE F+ +A ++ K+ +KL
Sbjct: 121 NKCDVNDKRQVSKDRGEKLALEYGIKFMETSAKANINVENAFLHLARDIKAKMDKKLEGN 180
Query: 261 HDRGVGMLTRI 271
+ +G +I
Sbjct: 181 NPQGSSQGVKI 191
>gi|242057717|ref|XP_002458004.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
gi|241929979|gb|EES03124.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
Length = 203
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 89/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Score = 42.4 bits (98), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 202 NKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
NK D E+R + E G+ A + +LETSAK + NVEK FM +A E+ ++A +
Sbjct: 121 NKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQ 176
>gi|217073632|gb|ACJ85176.1| unknown [Medicago truncatula]
Length = 207
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 89/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ + +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVG 120
>gi|224074217|ref|XP_002304305.1| predicted protein [Populus trichocarpa]
gi|118485751|gb|ABK94725.1| unknown [Populus trichocarpa]
gi|222841737|gb|EEE79284.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|303732|dbj|BAA02117.1| GTP-binding protein [Pisum sativum]
gi|738941|prf||2001457J GTP-binding protein
Length = 203
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|149394773|gb|ABR27273.1| Rab A61 [Nyctotherus ovalis]
Length = 206
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 89/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y LFK++L+GN+GVGK+CL+ R+ + F TIGVDF IKT ++++ IKLQIWD
Sbjct: 8 EYNLLFKLLLIGNSGVGKSCLLMRYAENTFTENFFNTIGVDFKIKTTTLDSKIIKLQIWD 67
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR++T SYYR AH +++VYD++ Q +F+C+ +W+ E++ A+ V R+L+G
Sbjct: 68 TAGQERFRTLTSSYYRGAHGILIVYDVTDQDSFECVKNWVSEVDRLANDTVCRILIG 124
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 185 YLASLEGHSNNIHC--MARNKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+++ ++ +N+ C + NK DRE DR+I E G D AK+++M +LE AK S +VE++
Sbjct: 106 WVSEVDRLANDTVCRILIGNKCDREADRKITFEQGADLAKQYEMPFLEALAKTSFHVEEV 165
Query: 242 FMQIAAELMEKLAE 255
F I + EK A+
Sbjct: 166 FNVITKAIDEKFAK 179
>gi|449458327|ref|XP_004146899.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
gi|449519234|ref|XP_004166640.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
Length = 201
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 199 MARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
+ NK D +R + E + FA + ++ETSAK + NVE+ FM + A++ ++A +
Sbjct: 118 LVGNKCDLPNRAVSYESAKAFADEVGIPFMETSAKDATNVEQAFMAMTADIKNRMASQ 175
>gi|388520849|gb|AFK48486.1| unknown [Lotus japonicus]
Length = 202
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|183235021|ref|XP_649033.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169800780|gb|EAL43647.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449709560|gb|EMD48804.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 199
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 90/118 (76%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ +LFK++++G++GVGK+CL+ RF+ VF TIGVDF IKT++IN IKLQIW
Sbjct: 3 QEFDYLFKILMIGDSGVGKSCLLLRFSDDVFSDTYITTIGVDFKIKTLKINGRDIKLQIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQERFR+IT SYYR AH +I+VYD++ +F+ + WL EIE AS V+++L+G
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIVVYDVTDVQSFNHIRQWLNEIEGNASPNVVKMLIG 120
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 185 YLASLEGHS--NNIHCMARNKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L +EG++ N + + NK D++ + + TE +FAK+ M + ETSAK S NVE
Sbjct: 102 WLNEIEGNASPNVVKMLIGNKADKDATKAVSTEQAAEFAKQEGMKFFETSAKQSINVEAA 161
Query: 242 FMQIAAELMEKLAEKLTIMHD 262
F+++A ++ ++ E + D
Sbjct: 162 FLELAQDIKNQMKETPRVTPD 182
>gi|329185063|ref|NP_001002129.2| ras-related protein-like [Danio rerio]
gi|66911050|gb|AAH97013.1| Zgc:86773 protein [Danio rerio]
Length = 201
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+C++ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCILLRFADDTYTESFISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +++ + WL+EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLKEIDRYASENVNKLLVG 120
>gi|326510941|dbj|BAJ91818.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531646|dbj|BAJ97827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++ VGK+CL+ RF + +TIGVDF I+TVE++ + +KLQIWD
Sbjct: 5 EYDYLFKLLLIGDSSVGKSCLLLRFADDAYVDTYISTIGVDFKIRTVELDGKSVKLQIWD 64
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + +F+ + WL EI+ YAS V ++LVG
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKQWLSEIDRYASDSVCKLLVGNKC 124
Query: 123 GL 124
L
Sbjct: 125 DL 126
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 185 YLASLEGHSNNIHC--MARNKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L+ ++ ++++ C + NK D D ++ TE + FA+ M +LETSAK S NVE
Sbjct: 103 WLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGMNFLETSAKESINVETA 162
Query: 242 FMQIAAELMEKLAEK 256
F+ +++E+ K+A +
Sbjct: 163 FLTMSSEIKNKMASQ 177
>gi|449016131|dbj|BAM79533.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 209
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 93/123 (75%), Gaps = 1/123 (0%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERI-KLQIW 61
D+ +LFK++L+G++GVGK+CL+ RF +G F +TIGVDF IK+++ + ++ KLQIW
Sbjct: 5 DFDYLFKLLLIGDSGVGKSCLLLRFAEGSFSDSFMSTIGVDFKIKSLQFEDGKVVKLQIW 64
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+IT SYYR AH +I+V+D++ + +F +T W+ EIE YAS V ++LVG
Sbjct: 65 DTAGQERFRTITSSYYRGAHGIIIVFDVTDEESFKNVTSWISEIENYASESVCKLLVGNK 124
Query: 122 SGL 124
+ L
Sbjct: 125 TDL 127
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 185 YLASLEGHSNNIHC--MARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+++ +E +++ C + NK D E R + + E+ A+R + Y+ETSAK +D+VE+
Sbjct: 104 WISEIENYASESVCKLLVGNKTDLTEQRVVTRQQAEELAQRLGIPYIETSAKTADHVEEA 163
Query: 242 FMQIAAELMEKLAEKLTIMHDRGVG 266
F+ + E+ + L + G G
Sbjct: 164 FVMMTKEIRNRTG-NLALAKGSGAG 187
>gi|1370166|emb|CAA98160.1| RAB1C [Lotus japonicus]
Length = 202
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 199 MARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
+ NK D E++ + E + FA + ++ETSAK + NVE+ FM +AAE+ ++A +
Sbjct: 118 LVGNKCDLTENKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQ 176
>gi|1616614|emb|CAA69701.1| small GTP-binding protein [Nicotiana plumbaginifolia]
Length = 203
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 89/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLSEIDRYASDSVNKLLVG 120
>gi|294883408|ref|XP_002770925.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239874051|gb|EER02741.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 211
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 94/122 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 9 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 68
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + +F+ + W++EI++YA+ V ++LVG S
Sbjct: 69 TAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKHWVQEIDKYATENVSKLLVGNKS 128
Query: 123 GL 124
L
Sbjct: 129 DL 130
>gi|359806422|ref|NP_001241498.1| uncharacterized protein LOC100783333 [Glycine max]
gi|255636244|gb|ACU18462.1| unknown [Glycine max]
Length = 202
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|356563372|ref|XP_003549938.1| PREDICTED: GTP-binding protein YPTM2-like isoform 2 [Glycine max]
Length = 215
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|340720307|ref|XP_003398582.1| PREDICTED: ras-related protein Rab-10-like isoform 1 [Bombus
terrestris]
Length = 200
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 104/155 (67%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTC++ RF+ F +TIG+DF IKTVE+ ++IKLQIWDT
Sbjct: 6 YDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQIWDT 65
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERF +IT SYYR A ++LVYDI+ + TF+ + WLR I+E+A+ V ++++G S
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMILGNKSD 125
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDED 158
++ +++A G + + S K D++ D
Sbjct: 126 MEDKRVVSTARGEAIAREHGIRFMETSAKADINID 160
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 8/81 (9%)
Query: 180 NEACF-----YLASLEGHSN-NIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F +L +++ H+N ++ M NK D ED R + T GE A+ H + ++ETS
Sbjct: 93 NEKTFENIVKWLRNIDEHANEDVEKMILGNKSDMEDKRVVSTARGEAIAREHGIRFMETS 152
Query: 232 AKASDNVEKLFMQIAAELMEK 252
AKA N+++ F ++ ++EK
Sbjct: 153 AKADINIDRAFNELTEAILEK 173
>gi|241124292|ref|XP_002404123.1| RAB-19, 41 and, putative [Ixodes scapularis]
gi|215493584|gb|EEC03225.1| RAB-19, 41 and, putative [Ixodes scapularis]
Length = 208
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 86/116 (74%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
+ FLFK+VL+G+ GVGKTC+V RF G++ G TIGVDF +KT+ + +++KLQIWDT
Sbjct: 7 FDFLFKIVLIGDCGVGKTCVVHRFKSGMYVERHGNTIGVDFAMKTLTVEGKKVKLQIWDT 66
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+ITQSYYRSA+ +I+VYDI+ + +F L W+ E+ Y V +L+G
Sbjct: 67 AGQERFRTITQSYYRSANGVIIVYDITKRSSFLSLPRWVEEVRRYTGSNVPLLLIG 122
>gi|157108598|ref|XP_001650303.1| ras-related protein Rab-1A, putative [Aedes aegypti]
gi|108879268|gb|EAT43493.1| AAEL005069-PA [Aedes aegypti]
Length = 206
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 90/123 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T++++ + IKLQIWD
Sbjct: 9 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWD 68
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD + Q +F+ + WL EIE YA V ++LVG
Sbjct: 69 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKTWLEEIERYACENVNKLLVGNKC 128
Query: 123 GLK 125
L+
Sbjct: 129 DLQ 131
>gi|156402311|ref|XP_001639534.1| predicted protein [Nematostella vectensis]
gi|156226663|gb|EDO47471.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 90/116 (77%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF+ F +TIG+DF IKT+E+ ++IKLQIWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIEMQGKKIKLQIWDT 65
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERF +IT SYYR A ++LVYDI+ + TFD ++ WLR IEE+A+ V ++++G
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILG 121
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 185 YLASLEGHSN-NIHCMA-RNKIDREDREIPT-EVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L ++E H+N ++ M NK D +DR I + E GE A+ H + +LETSAK + N+E+
Sbjct: 103 WLRNIEEHANEDVEKMILGNKCDMDDRRIVSRERGEQIAREHGIRFLETSAKTNINIEQA 162
Query: 242 FMQIAAELMEK 252
F +A ++++K
Sbjct: 163 FQYLAQDILKK 173
>gi|89258419|gb|ABD65433.1| Rab8 [Suberites domuncula]
Length = 175
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 91/116 (78%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y FLFK++L+G++GVGKTC++ RF++ F +TIG+DF I+TVEI ++IKLQIWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCILVRFSEDAFNSTFISTIGIDFKIRTVEIEGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IEE AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIRNWIRNIEENASADVEKMILG 120
>gi|156545982|ref|XP_001607208.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Nasonia
vitripennis]
Length = 211
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T++++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD + Q +F+ + WL EI+ YA V ++LVG S
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIDRYACDNVNKLLVGNKS 126
Query: 123 GL 124
L
Sbjct: 127 DL 128
>gi|167537652|ref|XP_001750494.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771034|gb|EDQ84708.1| predicted protein [Monosiga brevicollis MX1]
Length = 204
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 92/116 (79%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF IKT+E+++++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCILFRFSEDQFNSTFISTIGIDFKIKTIELDDKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +FD + W+R IE+ AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITAEKSFDNIKTWIRNIEQNASSDVERMILG 120
>gi|321465918|gb|EFX76917.1| hypothetical protein DAPPUDRAFT_106641 [Daphnia pulex]
Length = 211
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 92/116 (79%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNDKSFDNIKNWIRNIEEHASADVEKMILG 120
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK D D R++ + GE A + + ++ETSAKAS NVE F +A ++ K+ +KL
Sbjct: 121 NKCDMNDKRQVSKDRGEQLAIEYGIKFMETSAKASINVEDAFFTLARDIKAKMEKKLEAS 180
Query: 261 HDRGVG 266
H G G
Sbjct: 181 HPSGKG 186
>gi|225711854|gb|ACO11773.1| Ras-related protein Rab-8A [Lepeophtheirus salmonis]
Length = 212
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 92/116 (79%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNDKSFDNIKNWIRNIEEHASADVEKMILG 120
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 202 NKIDREDR-EIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D DR ++ E GED A + + ++ETSAK+S NVE+ F +A ++ K+ ++L
Sbjct: 121 NKCDINDRRKVTKEKGEDLAIEYGIKFMETSAKSSINVEEAFFTLARDIKAKMEKRL 177
>gi|118490011|gb|ABK96799.1| ras-related GTP binding protein [Solanum tuberosum]
Length = 203
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKL+IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYLESYISTIGVDFKIRTVEQDGKTIKLRIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLSEIDRYASDNVNKILVGNKA 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|91087113|ref|XP_975150.1| PREDICTED: similar to Rab-protein 1 CG3320-PA [Tribolium castaneum]
gi|270010550|gb|EFA06998.1| hypothetical protein TcasGA2_TC009965 [Tribolium castaneum]
Length = 202
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T++++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD + Q +F+ + WL EI+ YA V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDCTDQDSFNNVKQWLEEIDRYACDNVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|428672259|gb|EKX73173.1| Ras-related protein Rab1b small GTP-binding protein [Babesia equi]
Length = 220
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 91/120 (75%), Gaps = 1/120 (0%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
M++Y +LFK++++G++G GK+ L+ RF + +TIGVDF IKTV+I+N IKLQI
Sbjct: 1 MKEYDYLFKIIVIGDSGCGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNITIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTD-WLREIEEYASFKVLRVLVG 119
WDTAGQERFR+IT +YYR AH +I VYD++ + +FD +T+ WL +IE YA+ V ++L+G
Sbjct: 61 WDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLTDIERYATSNVSKLLIG 120
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 193 SNNIHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELME 251
SN + NKID D R + +E + A+ H+M Y+E SAK NVEK F+ IA L +
Sbjct: 112 SNVSKLLIGNKIDLADNRVVTSEEAKQVAEAHNMNYIEASAKTDSNVEKAFLSIAKSLKD 171
Query: 252 KLAE 255
K +
Sbjct: 172 KATQ 175
>gi|384497072|gb|EIE87563.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 204
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ +F+ + WL+EI+ YA+ V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDADSFNNVKQWLQEIDRYAAEGVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|290563002|gb|ADD38895.1| Ras-related protein Rab-8A [Lepeophtheirus salmonis]
Length = 211
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 92/116 (79%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNDKSFDNIKNWIRNIEEHASADVEKMILG 120
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 202 NKIDREDR-EIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D DR ++ E GED A + + ++ETSAK+S NVE+ F +A ++ K+ ++L
Sbjct: 121 NKCDINDRRKVTKEKGEDLAIEYGIKFMETSAKSSINVEEAFFTLARDIKAKMEKRL 177
>gi|157125296|ref|XP_001654277.1| ras-related protein Rab-8A, putative [Aedes aegypti]
gi|157125298|ref|XP_001654278.1| ras-related protein Rab-8A, putative [Aedes aegypti]
gi|157125300|ref|XP_001654279.1| ras-related protein Rab-8A, putative [Aedes aegypti]
gi|108873652|gb|EAT37877.1| AAEL010170-PA [Aedes aegypti]
gi|108873654|gb|EAT37879.1| AAEL010170-PC [Aedes aegypti]
gi|403183099|gb|EJY57852.1| AAEL010170-PB [Aedes aegypti]
Length = 208
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 105/156 (67%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +F+ + +W+R IEE AS V ++L+G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
L ++ G V+ + S K ++ DE
Sbjct: 125 LNEKRQVTRDRGEQLAVEYGIKFMETSAKASINVDE 160
>gi|75077202|sp|Q4R8X3.1|RAB1B_MACFA RecName: Full=Ras-related protein Rab-1B
gi|67967932|dbj|BAE00448.1| unnamed protein product [Macaca fascicularis]
Length = 201
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + ++ + WL+EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|37360618|dbj|BAC98287.1| mKIAA3012 protein [Mus musculus]
Length = 253
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 90/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQ WD
Sbjct: 55 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQRWD 114
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 115 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 171
>gi|395532013|ref|XP_003768067.1| PREDICTED: ras-related protein Rab-13 [Sarcophilus harrisii]
Length = 195
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 97/133 (72%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTCL+ RF + F +TIG+DF I+TVEI ++IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKKIKLQVWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERF++IT +YYR A +ILVYDI+ + +F+ + +W++ I+E AS V R+L+G
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 124 LKIVNEMASAAGL 136
+++ ++A G+
Sbjct: 125 MEVKRKLAREHGI 137
>gi|291237662|ref|XP_002738747.1| PREDICTED: RAB1A, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 206
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 89/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F + WL+EI+ YA V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFHNVKQWLQEIDRYACENVNKLLVG 123
>gi|444515602|gb|ELV10933.1| Ras-related protein Rab-1A [Tupaia chinensis]
Length = 205
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 62/114 (54%), Positives = 89/114 (78%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAG 65
+LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWDTAG
Sbjct: 10 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAG 69
Query: 66 QERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
QERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 70 QERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
>gi|51468996|emb|CAH17998.1| RAB1-like [Poa pratensis]
Length = 203
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLNEIDRYASDNVNKLLVGNKC 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|871506|emb|CAA90081.1| small GTP-binding protein [Pisum sativum]
Length = 215
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
D +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DSDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
Query: 180 NEACF-----YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLET 230
+EA F ++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ET
Sbjct: 99 DEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFET 158
Query: 231 SAKASDNVEKLFMQIAAELMEKLAE 255
SAK + NVE++F IA ++ ++LA+
Sbjct: 159 SAKTNMNVEEVFFSIARDIKQRLAD 183
>gi|357122771|ref|XP_003563088.1| PREDICTED: GTP-binding protein YPTM2-like [Brachypodium distachyon]
Length = 203
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|390346096|ref|XP_781611.3| PREDICTED: ras-related protein Rab-1A isoform 2 [Strongylocentrotus
purpuratus]
Length = 212
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 62/114 (54%), Positives = 89/114 (78%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAG 65
+LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWDTAG
Sbjct: 16 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVIKLQIWDTAG 75
Query: 66 QERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
QERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 76 QERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 129
>gi|159795493|pdb|2RHD|A Chain A, Crystal Structure Of Cryptosporidium Parvum Small Gtpase
Rab1a
Length = 175
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 89/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+ + N+ +KLQIWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWD 64
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ + +FD + W++EI+ YA V ++LVG
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMENVNKLLVG 121
>gi|255634140|gb|ACU17433.1| unknown [Glycine max]
Length = 212
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 89/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ + +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVG 120
>gi|302787058|ref|XP_002975299.1| rab family GTPase [Selaginella moellendorffii]
gi|302822855|ref|XP_002993083.1| rab family GTPase [Selaginella moellendorffii]
gi|300139083|gb|EFJ05831.1| rab family GTPase [Selaginella moellendorffii]
gi|300156873|gb|EFJ23500.1| rab family GTPase [Selaginella moellendorffii]
Length = 212
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDNSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PTE G+ A + + ETSAK + NVE
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTEKGQALADEFGIKFFETSAKTNQNVED 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LAE
Sbjct: 169 VFFTIARDIKQRLAE 183
>gi|255071629|ref|XP_002499489.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226514751|gb|ACO60747.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 204
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE+ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELEGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ +F+ + WL EI+ YA+ V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDAESFNNVKQWLNEIDRYANENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|148701156|gb|EDL33103.1| RAB1B, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 189
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/146 (47%), Positives = 101/146 (69%), Gaps = 8/146 (5%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 123 GL---KIVNEMASAAGLLCTVDPALA 145
L K+V+ + PALA
Sbjct: 124 DLTTKKVVDNTTAKVS-----RPALA 144
>gi|444510207|gb|ELV09542.1| Kinesin light chain 2 [Tupaia chinensis]
Length = 1051
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 90/119 (75%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAG 65
+LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWDTAG
Sbjct: 685 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAG 744
Query: 66 QERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSGL 124
QERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S L
Sbjct: 745 QERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDL 803
>gi|392574050|gb|EIW67187.1| hypothetical protein TREMEDRAFT_40402 [Tremella mesenterica DSM
1558]
Length = 205
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + TF + WL+EI+ YA V ++LVG S
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDRDTFTNVKQWLQEIDRYAVEGVNKLLVGNKS 124
Query: 123 GL 124
L
Sbjct: 125 DL 126
>gi|351725923|ref|NP_001237621.1| uncharacterized protein LOC100499898 [Glycine max]
gi|255627505|gb|ACU14097.1| unknown [Glycine max]
Length = 201
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 96/135 (71%), Gaps = 3/135 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++ VGK+CL+ RF + +TIGVDF I+TVE+ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELEGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ +F+ + WL EI+ YA+ V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKS 123
Query: 123 GL---KIVNEMASAA 134
L K+V+ + + A
Sbjct: 124 DLVDNKVVDSLTAKA 138
>gi|388498284|gb|AFK37208.1| unknown [Medicago truncatula]
Length = 203
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK+ L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLPLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|313229256|emb|CBY23842.1| unnamed protein product [Oikopleura dioica]
Length = 213
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 90/119 (75%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
++D LFK++L+G++GVGKTC++ RF+ F +TIG+DF IKTVE+ ++IKLQI
Sbjct: 10 IQDNHLLFKLLLIGDSGVGKTCVLFRFSDDTFNTTFISTIGIDFKIKTVELQGKKIKLQI 69
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERF +IT SYYR A+ ++LVYDI+ TFD ++ WLR I E+AS V R+L+G
Sbjct: 70 WDTAGQERFHTITTSYYRGANGILLVYDITQPKTFDNISKWLRNINEHASEDVERMLIG 128
>gi|327279586|ref|XP_003224537.1| PREDICTED: LOW QUALITY PROTEIN: nck-associated protein 1-like
[Anolis carolinensis]
Length = 1152
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 104/161 (64%)
Query: 388 ASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDF 447
A ++ K KK E KPGAES+RK R T +DKLH+ LTELC+++N T+ V++
Sbjct: 662 ARNKRAQKVAKKGEPERDKPGAESHRKDRSLATNLDKLHITLTELCWSLNQVTSFVVFEH 721
Query: 448 TFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHID 507
T P EYL LE+R SR+LV + P++ E+++PSE+L V+AY L ++ + V +D
Sbjct: 722 TVTPAEYLSSQLETRLSRSLVLLAKPTPNSPELSRPSEVLTGVQAYATFLVSLMHRVALD 781
Query: 508 MTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVS 548
R+ + LLQQTQ +D++GE+T+ LY WY E LLR+ S
Sbjct: 782 TGRLLRSVLLQQTQPLDANGEQTLTTLYTNWYLESLLRQAS 822
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 71/97 (73%)
Query: 570 VHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSLNQRAFVS 629
V +D R+ + LLQQTQ +D++GE+T+ LY WY E LLR+ S G+I FS ++FVS
Sbjct: 778 VALDTGRLLRSVLLQQTQPLDANGEQTLTTLYTNWYLESLLRQASMGSIVFSPAMKSFVS 837
Query: 630 LTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+ EG F+AEEFSDV+E+RAL+ L+GPYGMK L++
Sbjct: 838 IPKEGEQTFSAEEFSDVSEMRALSQLLGPYGMKFLSD 874
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 59/78 (75%), Gaps = 4/78 (5%)
Query: 271 IYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKSVS----GISQIRSDIVKSL 326
+YN+++ C D +SKP+F ++K++ES IK I+KKFPN+D +S++ + + ++DI ++L
Sbjct: 51 LYNLRETCMDPRSKPAFFTEKTMESSIKYIIKKFPNLDTRSMTQHLGPVHKDKADIFRAL 110
Query: 327 SLYYYTFVDLLHFKDCVY 344
YY+TFVD++ F+D VY
Sbjct: 111 GAYYHTFVDVMEFRDHVY 128
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+A+AAG+ C +DPAL AL++ K D E+++ +ACLL+VFVAV +P LA + + Y
Sbjct: 981 ELATAAGVPCDIDPALVCALSNLKKDSSSPEEDYKIACLLLVFVAVSLPLLANDASSVYT 1040
Query: 187 ASLEGHSNNIHCMARNKI 204
+ G+SNNIHC+A+ I
Sbjct: 1041 TDINGYSNNIHCLAKAII 1058
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
++ +EM+H SD ++PRLGQMI++YE P++KL EEF PH
Sbjct: 180 YHCTYEMIHGTSDASYPRLGQMILEYENPLRKLMEEFGPH 219
>gi|340380157|ref|XP_003388590.1| PREDICTED: ras-related protein Rab-8A-like [Amphimedon
queenslandica]
gi|340386342|ref|XP_003391667.1| PREDICTED: ras-related protein Rab-8A-like [Amphimedon
queenslandica]
Length = 205
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 93/122 (76%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y FLFK++L+G++GVGKTC++ RF++ F +TIG+DF I+TV+I ++IKLQIWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCILVRFSEDAFNSTFISTIGIDFKIRTVDIEGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYD++ + +FD + +W+R IEE A+ V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNEKSFDNIRNWIRNIEENAAADVEKMILGNKCD 124
Query: 124 LK 125
L+
Sbjct: 125 LE 126
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 202 NKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKL 253
NK D E R + E G+ A+ H + ++ETSAK+ NVE F+ +A ++ K+
Sbjct: 121 NKCDLEESRVVSRERGQLLAEEHQVKFMETSAKSGQNVETAFLNLAKDIKNKM 173
>gi|399163151|gb|AFP33151.1| rab-8, partial [Caenorhabditis elegans]
Length = 210
Score = 141 bits (356), Expect = 1e-30, Method: Composition-based stats.
Identities = 67/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF+ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 4 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDT 63
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A +ILVYDI+ + +F+ + +W+R IEE+A+ V R+++G
Sbjct: 64 AGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCD 123
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
++ E++ G ++ S K +L+ DE
Sbjct: 124 IEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDE 159
Score = 39.3 bits (90), Expect = 8.8, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 202 NKIDREDR-EIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK D E+R E+ + GE A + +LETSAKA+ N+++ F +A ++ K+ +
Sbjct: 120 NKCDIEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKMEQN---- 175
Query: 261 HDRGVGMLTRIYNIKKACGDAKSKPSFLSDKS 292
R G ++ + G K SF S+ S
Sbjct: 176 EMRAGGSVSNTGRVNVG-GSGTQKKSFFSNWS 206
>gi|328866963|gb|EGG15346.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 199
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 105/163 (64%), Gaps = 14/163 (8%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y L K++++G++GVGK+C++ RF F +TIGVDF I+T+E++ +RIKLQIWD
Sbjct: 27 EYDMLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKRIKLQIWD 86
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERF++IT SYYR AH LI+VYDI+ +F+ + WL +++ +AS VL+++VG
Sbjct: 87 TAGQERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPSVLKLIVGNKC 146
Query: 123 GL--------KIVNEMASAAGLLCTVDPALATALASDKTDLDE 157
L KI + + + P L T+ A D T +DE
Sbjct: 147 DLNNKRAVDFKIAKKFSDELNI-----PILETS-AKDSTGIDE 183
>gi|339237905|ref|XP_003380507.1| GTP-binding protein YPTC1 [Trichinella spiralis]
gi|316976620|gb|EFV59875.1| GTP-binding protein YPTC1 [Trichinella spiralis]
Length = 200
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 89/119 (74%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
+ +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T++++ + IKLQIWDT
Sbjct: 3 FDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIDLDGKTIKLQIWDT 62
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
AGQERFR+IT SYYR AH +I+VYDIS Q +F+ + WL EIE YA V ++LVG S
Sbjct: 63 AGQERFRTITSSYYRGAHGIIVVYDISDQESFNNVKQWLLEIERYACENVNKLLVGNKS 121
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 199 MARNKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
+ NK DR +R + + +++A + + +LETSAK S NVE+ F+ +A E+ +L+
Sbjct: 116 LVGNKSDRTAERAVEYDTAKEYADQLGIPFLETSAKNSTNVEQAFLTMAGEIKRRLS 172
>gi|294949450|ref|XP_002786203.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239900360|gb|EER17999.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 205
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 94/122 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + +F+ + W++EI++YA+ V ++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKHWVQEIDKYATENVSKLLVGNKT 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|432856212|ref|XP_004068408.1| PREDICTED: ras-related protein Rab-8A-like [Oryzias latipes]
Length = 206
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 91/116 (78%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF F +TIG+DF I+T+++N ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFADDAFNSTFISTIGIDFKIRTIDLNGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +F+ + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASADVERMVLG 120
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 202 NKIDREDR-EIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK D DR ++ E GE A + + ++ETSAKA+ NVE F+ +A ++ K+ +KL
Sbjct: 121 NKCDVNDRRQVSKERGEQLALEYGIKFMETSAKANINVENAFLTLARDIKAKMDKKLEGN 180
Query: 261 HDRGVGMLTRI 271
+ +G +I
Sbjct: 181 NPQGSNQGVKI 191
>gi|358248394|ref|NP_001239874.1| uncharacterized protein LOC100796206 [Glycine max]
gi|414832|gb|AAA34003.1| Rab7p [Glycine max]
Length = 201
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 96/135 (71%), Gaps = 3/135 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++ VGK+CL+ RF + +TIGVDF I+TVE+ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELEGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ +F+ + WL EI+ YA+ V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDTVCKLLVGNKS 123
Query: 123 GL---KIVNEMASAA 134
L K+V+ + + A
Sbjct: 124 DLVDNKVVDSLTAKA 138
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 185 YLASLEGHSNNIHC--MARNKIDREDREIPTEV-GEDFAKRHDMYYLETSAKASDNVEKL 241
+L ++ ++N+ C + NK D D ++ + + FA + +LETSAK S NVE+
Sbjct: 102 WLNEIDRYANDTVCKLLVGNKSDLVDNKVVDSLTAKAFADELGIPFLETSAKDSINVEQA 161
Query: 242 FMQIAAELMEKLAEKLT 258
F+ +AAE+ +K+ + T
Sbjct: 162 FLTMAAEIKKKMGSQTT 178
>gi|348522032|ref|XP_003448530.1| PREDICTED: ras-related protein Rab-8A-like [Oreochromis niloticus]
Length = 206
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +F+ + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASADVEKMVLG 120
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S ++ M NK D D R++ E+GE A + + ++ETS
Sbjct: 92 NEKSFENIKNWIRNIEEHASADVEKMVLGNKCDINDKRQVSKEMGEKLALEYGIKFMETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKL 257
AK++ NVE F+ +A ++ K+ KL
Sbjct: 152 AKSNINVENAFLTLARDIKSKMDTKL 177
>gi|25150215|ref|NP_491199.2| Protein RAB-8 [Caenorhabditis elegans]
gi|40788402|dbj|BAD07034.1| Rab8 [Caenorhabditis elegans]
gi|351060636|emb|CCD68351.1| Protein RAB-8 [Caenorhabditis elegans]
Length = 211
Score = 141 bits (356), Expect = 1e-30, Method: Composition-based stats.
Identities = 67/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF+ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A +ILVYDI+ + +F+ + +W+R IEE+A+ V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
++ E++ G ++ S K +L+ DE
Sbjct: 125 IEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDE 160
Score = 38.9 bits (89), Expect = 8.9, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 202 NKIDREDR-EIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK D E+R E+ + GE A + +LETSAKA+ N+++ F +A ++ K+ +
Sbjct: 121 NKCDIEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKMEQN---- 176
Query: 261 HDRGVGMLTRIYNIKKACGDAKSKPSFLSDKS 292
R G ++ + G K SF S+ S
Sbjct: 177 EMRAGGSVSNTGRVNVG-GSGTQKKSFFSNWS 207
>gi|195375225|ref|XP_002046402.1| GJ12523 [Drosophila virilis]
gi|194153560|gb|EDW68744.1| GJ12523 [Drosophila virilis]
Length = 220
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 102/165 (61%), Gaps = 1/165 (0%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ FLFK+VL+G+ GKT +++RF G + G TIGVDF +KT+E+ +++KLQIW
Sbjct: 16 ENFDFLFKIVLIGDCCTGKTSILQRFKTGNYVERHGNTIGVDFSMKTIEVEGKQVKLQIW 75
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYR+ + +I+VYDI+ + TF L W+ E+ Y + VL +L+G
Sbjct: 76 DTAGQERFRTITQSYYRANNGVIIVYDITKRSTFANLQKWIEEVRRYTASNVLIILIGNK 135
Query: 122 SGLKIVNEMA-SAAGLLCTVDPALATALASDKTDLDEDEHVLACL 165
L+ E+ A +C P + + + + E CL
Sbjct: 136 CDLEAEREVDFEEARQMCQYIPEILFVMETSAKENTNVEDAFRCL 180
>gi|51468998|emb|CAH17999.1| RAB1-like [Poa pratensis]
Length = 203
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 89/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLNEIDRYASDNVNKLLVG 120
>gi|224012645|ref|XP_002294975.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
gi|220969414|gb|EED87755.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
Length = 213
Score = 141 bits (356), Expect = 1e-30, Method: Composition-based stats.
Identities = 62/122 (50%), Positives = 88/122 (72%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
++DY +LFK+VL+G++GVGK+CL+ RF F +TIGVDF +TV++ + +KLQI
Sbjct: 9 IKDYDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKMGKKTVKLQI 68
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGG 120
WDTAGQERFR+IT +YYR A +I+VYD + +FD + DWL+E+ YAS ++LVG
Sbjct: 69 WDTAGQERFRTITSAYYRGADGIIMVYDTTSSDSFDHVNDWLKEVNRYASEGTCKLLVGN 128
Query: 121 TS 122
S
Sbjct: 129 KS 130
Score = 46.2 bits (108), Expect = 0.059, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 202 NKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK DR DR + TE ++FA + +LETSAK + NVE+ F+ +A EL+++ K+
Sbjct: 128 NKSDRTADRAVTTEQAKEFADDLGVAFLETSAKTAKNVEEAFLTMAGELIKQREAKI 184
>gi|168027123|ref|XP_001766080.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162682723|gb|EDQ69139.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + ETSAK + NVE
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEFGIKFFETSAKTNMNVED 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LAE
Sbjct: 169 VFFTIARDIKQRLAE 183
>gi|225441149|ref|XP_002267366.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297739984|emb|CBI30166.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLVKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSQGQALADEYGIKFFETSAKTNFNVEQ 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ +++AE
Sbjct: 169 VFFSIARDIKQRIAE 183
>gi|402218390|gb|EJT98467.1| GTP-binding protein ypt1 [Dacryopinax sp. DJM-731 SS1]
Length = 206
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ TF + WL+EI+ +AS V ++LVG S
Sbjct: 65 TAGQERFRTITASYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRFASEGVNKLLVGNKS 124
Query: 123 GL 124
L
Sbjct: 125 DL 126
>gi|413923309|gb|AFW63241.1| hypothetical protein ZEAMMB73_436511 [Zea mays]
Length = 272
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 92/124 (74%), Gaps = 2/124 (1%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
++DY LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQI
Sbjct: 73 LDDY--LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 130
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGG 120
WDTAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 131 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGN 190
Query: 121 TSGL 124
S L
Sbjct: 191 KSDL 194
>gi|426369378|ref|XP_004051668.1| PREDICTED: ras-related protein Rab-1B [Gorilla gorilla gorilla]
Length = 198
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 92/124 (74%), Gaps = 2/124 (1%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
M DY LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQI
Sbjct: 1 MGDY--LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 58
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGG 120
WDTAGQERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG
Sbjct: 59 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGN 118
Query: 121 TSGL 124
S L
Sbjct: 119 KSDL 122
>gi|184186107|ref|NP_001116975.1| GTPase homolog [Strongylocentrotus purpuratus]
Length = 207
Score = 141 bits (355), Expect = 1e-30, Method: Composition-based stats.
Identities = 62/116 (53%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y FLFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ Q +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNQKSFDNIRNWIRNIEEHASADVEKMILG 120
Score = 44.7 bits (104), Expect = 0.21, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 202 NKIDREDRE-IPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D +DR + E GE A + + ++ETSAKAS NVE+ F+ +A ++ K+ K+
Sbjct: 121 NKCDMDDRRAVSKEKGEQLAIEYGIKFMETSAKASINVEEAFVTLARDIKSKMDRKM 177
>gi|38048295|gb|AAR10050.1| similar to Drosophila melanogaster Rab1, partial [Drosophila
yakuba]
Length = 123
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 88/117 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD + Q +F+ + WL EIE YA V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVG 123
>gi|1381678|gb|AAB97115.1| small GTP-binding protein [Glycine max]
Length = 202
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 92/123 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF+ + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKC 123
Query: 123 GLK 125
L+
Sbjct: 124 DLE 126
>gi|47229882|emb|CAG07078.1| unnamed protein product [Tetraodon nigroviridis]
Length = 981
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 102/163 (62%), Gaps = 2/163 (1%)
Query: 388 ASRRKKDKNNKKILNEIIK--PGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVW 445
A+RR+K K E+ K PGAES RK R TT+DK+H+ LTELC + ++ +V+
Sbjct: 596 AARRRKQKKQTPKKGEVQKEKPGAESLRKDRTVATTVDKMHLTLTELCCCYSLSSDFKVF 655
Query: 446 DFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVH 505
+ P E+L HLE R S +V M +N T EIA+PSELL + AY LQ++ +Y++
Sbjct: 656 NHCITPTEFLLSHLEIRLSEIIVRMANYNQTTQEIARPSELLMGITAYTTSLQSLSSYIN 715
Query: 506 IDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVS 548
+D+TR+ + LLQQT+ D+ G +T+ LY W+ E LLR+ S
Sbjct: 716 VDVTRLVKSVLLQQTRPQDARGAQTITTLYTNWFLESLLRQAS 758
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 107/214 (50%), Gaps = 32/214 (14%)
Query: 475 PDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMT------------RVFNNALLQQTQR 522
P E+ K S+R V TV+ +H+ +T +VFN+ + T+
Sbjct: 607 PKKGEVQKEKPGAESLRKDRTVATTVDK-MHLTLTELCCCYSLSSDFKVFNHCI-TPTEF 664
Query: 523 MDSHGEKTVAALYIQWYSEVLLRRVSETQV-----KSLNLLNFLRVYT-----VENYVHI 572
+ SH E + SE+++R + Q + LL + YT + +Y+++
Sbjct: 665 LLSHLEIRL--------SEIIVRMANYNQTTQEIARPSELLMGITAYTTSLQSLSSYINV 716
Query: 573 DMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSLNQRAFVSLTA 632
D+TR+ + LLQQT+ D+ G +T+ LY W+ E LLR+ S I FVS +
Sbjct: 717 DVTRLVKSVLLQQTRPQDARGAQTITTLYTNWFLESLLRQASNCLIVHCPTLHCFVSQST 776
Query: 633 EGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+ F AEEFSDV ELRALA L+GPYG+ LNE
Sbjct: 777 DNEPSFRAEEFSDVAELRALAKLLGPYGLNFLNE 810
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 69/104 (66%), Gaps = 10/104 (9%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKK------ACGDAKSKPSFLSDKSLESCIKQIVKKF 304
+KLAEKL I+++RG G+L R+ IKK C D K++ L+DK +ES IK I KKF
Sbjct: 5 QKLAEKLVILNERGNGVLVRMNYIKKVRESKWTCADPKTRLPLLTDKGMESAIKYINKKF 64
Query: 305 PNID----IKSVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
PNID I+++ I + +S+++ + + +Y +F+D++ F+D VY
Sbjct: 65 PNIDFRGNIQNLISIQRQKSEVLAATASFYDSFLDVIEFRDHVY 108
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Query: 96 DCLTDWLREIEEY--ASFKVLRVLVGGTSGLKI---VNEMASAAGLLCTVDPALATALAS 150
DCL D L + Y K LR + +K+ V E+ASAAG C +D L A+ S
Sbjct: 879 DCLNDILHQHCPYLMGPIKCLRDDIHSEEDIKVTLSVYELASAAGFQCDIDTTLTAAIGS 938
Query: 151 DKTD--LDEDEHVLACLLMVFVAVCIPKLARN 180
+TD ++E+ L CLL++++AV +P LA +
Sbjct: 939 MQTDNSSPDEEYRLFCLLLLYIAVSLPTLASD 970
>gi|393218947|gb|EJD04435.1| GTP-binding protein SAS1 [Fomitiporia mediterranea MF3/22]
Length = 204
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 88/116 (75%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y FL K++L+G++GVGK+CL+ RF + P TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 6 YDFLIKLLLIGDSGVGKSCLLTRFCDDTWTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 65
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYD++ Q +FD + W +E++AS +V R+LVG
Sbjct: 66 AGQERFRTITTAYYRGAMGILLVYDVTDQKSFDNIDTWFSAVEQHASNEVDRILVG 121
>gi|407039382|gb|EKE39614.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 205
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 89/124 (71%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E+ +LFK++L+G++GVGK+CL+ RF + ATIGVDF IKTV+I+ + IKLQIW
Sbjct: 3 EEKDYLFKLLLIGDSGVGKSCLLLRFADDTYTDTHIATIGVDFKIKTVQIDGKNIKLQIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+IT SYYR A +I+VY + TF + WL+EIE YAS V+++L+G
Sbjct: 63 DTAGQERFRTITSSYYRGAQGIIVVYSVIDLQTFQNVRQWLQEIERYASETVIKLLIGNK 122
Query: 122 SGLK 125
L+
Sbjct: 123 CDLE 126
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 185 YLASLEGHSNN--IHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L +E +++ I + NK D ED R + E G++ A ++ ++E SAK S NV++L
Sbjct: 102 WLQEIERYASETVIKLLIGNKCDLEDERAVTVEQGQELANSLNVSFMEASAKKSLNVDEL 161
Query: 242 FMQIAAELMEKL 253
F++IA ++M+ +
Sbjct: 162 FIKIATDIMKNI 173
>gi|19115492|ref|NP_594580.1| GTPase Ypt2 [Schizosaccharomyces pombe 972h-]
gi|141305|sp|P17609.1|YPT2_SCHPO RecName: Full=GTP-binding protein ypt2; AltName: Full=SEC4 homolog
gi|5144|emb|CAA36707.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5150|emb|CAA37045.1| unnamed protein product [Schizosaccharomyces pombe]
gi|2414662|emb|CAB16405.1| GTPase Ypt2 [Schizosaccharomyces pombe]
Length = 200
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 105/156 (67%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +L K++L+G++GVGK+CL+ RF++ F P TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 65
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++L+YD++ + +FD + W +E++AS V ++L+G
Sbjct: 66 AGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCD 125
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G + + AS KT+++ DE
Sbjct: 126 CEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDE 161
>gi|307198018|gb|EFN79078.1| Ras-related protein Rab-1A [Harpegnathos saltator]
Length = 206
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 89/122 (72%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T++++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD + Q TF+ + WL EI+ YA V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKC 126
Query: 123 GL 124
L
Sbjct: 127 DL 128
>gi|357135065|ref|XP_003569132.1| PREDICTED: ras-related protein RABD1-like [Brachypodium distachyon]
Length = 205
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 89/122 (72%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++ VGK+CL+ RF + +TIGVDF I+TVE++ + +KLQIWD
Sbjct: 5 EYDYLFKLLLIGDSSVGKSCLLLRFADDAYVDTYISTIGVDFKIRTVELDGKSVKLQIWD 64
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ +F+ + WL EI+ YAS V ++LVG
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQWLSEIDRYASDSVCKLLVGNKC 124
Query: 123 GL 124
L
Sbjct: 125 DL 126
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 185 YLASLEGHSNNIHC--MARNKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L+ ++ ++++ C + NK D D ++ TE + A M +LETSAK S NVEK
Sbjct: 103 WLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKALADSLGMTFLETSAKESINVEKA 162
Query: 242 FMQIAAELMEKL-----AEKLTIMHDRGVG 266
F+ +++E+ +++ AE+ +H G G
Sbjct: 163 FLTMSSEIKKRMATQPAAERKPTVHLHGKG 192
>gi|322786717|gb|EFZ13086.1| hypothetical protein SINV_00792 [Solenopsis invicta]
Length = 206
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 88/117 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T++++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD + Q TF+ + WL EI+ YA V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVG 123
>gi|225465202|ref|XP_002264623.1| PREDICTED: ras-related protein RABD1 [Vitis vinifera]
gi|297739505|emb|CBI29687.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 88/117 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +LFK++L+G++ VGK+CL+ RF + +TIGVDF I+TVE++ + IKLQIWD
Sbjct: 4 DYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ +F+ + WL EI+ YA+ V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVG 120
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 185 YLASLEGHSNNIHC--MARNKIDR-EDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L ++ ++N+ C + NK D E++ + TE + FA + +LETSAK S NVE+
Sbjct: 102 WLNEIDRYANDSVCKLLVGNKCDLVENKVVDTETAKAFADELGIPFLETSAKDSINVEQA 161
Query: 242 FMQIAAELMEKLAEK 256
F+ +A E+ +K+ +
Sbjct: 162 FLTMAGEIKKKMGNQ 176
>gi|89257443|gb|ABD64935.1| GTP-binding protein, putative [Brassica oleracea]
Length = 203
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+ YD++ Q +F+ + WL EI+ YAS V ++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKN 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|224284051|gb|ACN39763.1| unknown [Picea sitchensis]
Length = 216
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTARGQALADEFGIKFFETSAKTNLNVEQ 168
Query: 241 LFMQIAAELMEKLAEKLT 258
+F IA ++ ++LAE T
Sbjct: 169 VFFTIARDIKQRLAESDT 186
>gi|340713998|ref|XP_003395520.1| PREDICTED: ras-related protein Rab-1A-like [Bombus terrestris]
gi|350418865|ref|XP_003491994.1| PREDICTED: ras-related protein Rab-1A-like [Bombus impatiens]
gi|380024902|ref|XP_003696227.1| PREDICTED: ras-related protein Rab-1A-like [Apis florea]
Length = 206
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 89/122 (72%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T++++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD + Q TF+ + WL EI+ YA V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKC 126
Query: 123 GL 124
L
Sbjct: 127 DL 128
>gi|229596300|ref|XP_001011511.3| Ras family protein [Tetrahymena thermophila]
gi|225565488|gb|EAR91266.3| Ras family protein [Tetrahymena thermophila SB210]
gi|307777758|dbj|BAJ21275.1| Rab-family small GTPase Rab1B [Tetrahymena thermophila]
Length = 212
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 91/123 (73%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
++Y LFK+VL+GN+GVGK+C++ R+ + F TIGVDF IKT+ + ++IKLQIW
Sbjct: 11 QEYDHLFKLVLIGNSGVGKSCMLMRYAENTFTQNFYNTIGVDFKIKTINLQGKQIKLQIW 70
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQ+RF++IT +YYR AH +++VYD++ + +F+ + W+ EIE+YA V ++L+G
Sbjct: 71 DTAGQDRFKTITTNYYRGAHGIVVVYDVTDKLSFENVKTWMSEIEKYAQENVCKLLIGNK 130
Query: 122 SGL 124
S L
Sbjct: 131 SDL 133
>gi|345480659|ref|XP_003424189.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Nasonia
vitripennis]
Length = 210
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IEE AS V ++L+G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
L +++ G ++ + S K+ ++ +E
Sbjct: 125 LTSKRQVSKERGEALAIEYGIKFMETSAKSSINVEE 160
>gi|255645965|gb|ACU23471.1| unknown [Glycine max]
Length = 169
Score = 141 bits (355), Expect = 2e-30, Method: Composition-based stats.
Identities = 61/122 (50%), Positives = 93/122 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E + +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEQDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG +
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 123 GL 124
+
Sbjct: 131 DM 132
>gi|195135342|ref|XP_002012093.1| GI16780 [Drosophila mojavensis]
gi|193918357|gb|EDW17224.1| GI16780 [Drosophila mojavensis]
Length = 219
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 102/165 (61%), Gaps = 1/165 (0%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ FLFK+VL+G+ GKT +++RF G + G TIGVDF +KT+E+ +++KLQIW
Sbjct: 16 ENFDFLFKIVLIGDCCTGKTSILQRFKTGNYVERHGNTIGVDFSMKTIEVEGKQVKLQIW 75
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYR+ + +I+VYDI+ + TF L W+ E+ Y + VL +L+G
Sbjct: 76 DTAGQERFRTITQSYYRANNGVIIVYDITKRATFANLQKWIEEVRRYTASNVLIILIGNK 135
Query: 122 SGLKIVNEMA-SAAGLLCTVDPALATALASDKTDLDEDEHVLACL 165
L+ E+ A +C P + + + + E CL
Sbjct: 136 CDLESEREVDFEEARQMCQYIPEILFVMETSAKENTNVEDAFRCL 180
>gi|392349166|ref|XP_003750307.1| PREDICTED: ras-related protein Rab-1A-like [Rattus norvegicus]
Length = 213
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 100/141 (70%), Gaps = 7/141 (4%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + + IGVDF I+T+E+ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADVTYIESYISIIGVDFKIRTIELEGKIIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR +H +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG T
Sbjct: 67 TAGQERFRTITSSYYRGSHGIIVVYDVTNQESFNNVKQWLQEIDRYASENVNKLLVGNTC 126
Query: 123 GL--KIVN-----EMASAAGL 136
L K+V+ E A + G+
Sbjct: 127 DLTXKVVDYTMAKEFADSLGI 147
>gi|213401875|ref|XP_002171710.1| GTP-binding protein SAS1 [Schizosaccharomyces japonicus yFS275]
gi|211999757|gb|EEB05417.1| GTP-binding protein SAS1 [Schizosaccharomyces japonicus yFS275]
Length = 200
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 104/156 (66%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +L K++L+G++GVGK+CL+ RF++ F P TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 65
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++L+YD++ + +F+ + W +E++AS V ++L+G
Sbjct: 66 AGQERFRTITTAYYRGAMGILLLYDVTDEKSFENIRTWFSNVEQHASENVFKILIGNKCD 125
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ ++ G + + AS KT+++ DE
Sbjct: 126 CEEQRQVTYEQGQALAEELGIKFLEASAKTNVNVDE 161
>gi|112983246|ref|NP_001037010.1| small GTP-binding protein [Bombyx mori]
gi|2338554|gb|AAB67169.1| small GTP-binding protein [Bombyx mori]
Length = 202
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 87/117 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TV++N + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD + Q +F + WL EI+ YA V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNKLLVG 120
>gi|156551213|ref|XP_001600682.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Nasonia
vitripennis]
Length = 209
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IEE AS V ++L+G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
L +++ G ++ + S K+ ++ +E
Sbjct: 125 LTSKRQVSKERGEALAIEYGIKFMETSAKSSINVEE 160
>gi|156397996|ref|XP_001637975.1| predicted protein [Nematostella vectensis]
gi|156225092|gb|EDO45912.1| predicted protein [Nematostella vectensis]
Length = 191
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 92/124 (74%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
++ K+ FKV++VG+ GVGKT L+RRFT+G F +T+GVD + ++I+ +R+KLQ W
Sbjct: 6 DNCKYSFKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCW 65
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQE+FR ITQSYYR+A A+ILV+DI+ + TF + WL +++Y + +L+VLVG
Sbjct: 66 DTAGQEKFRGITQSYYRNADAVILVFDITNRGTFASIPQWLMNVQKYTNKNILKVLVGNK 125
Query: 122 SGLK 125
+ LK
Sbjct: 126 TDLK 129
>gi|432868521|ref|XP_004071579.1| PREDICTED: ras-related protein Rab-37-like [Oryzias latipes]
Length = 229
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 90/124 (72%), Gaps = 1/124 (0%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQG-ATIGVDFMIKTVEINNERIKLQI 60
E Y FKV+L+G++ VGKTC++ RF G F G AT+G+DF K V+++N ++KLQI
Sbjct: 30 EYYDIAFKVMLLGDSAVGKTCVLVRFKDGAFLGGNFIATVGIDFRNKVVDVDNLKVKLQI 89
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGG 120
WDTAGQERFRS+T +YYR A AL+L+YDI+ +P+FD + WL EI EYA V+ +L+G
Sbjct: 90 WDTAGQERFRSVTHAYYRDAQALLLIYDITNKPSFDNIRAWLTEIHEYAQKDVVIMLLGN 149
Query: 121 TSGL 124
S +
Sbjct: 150 KSDM 153
>gi|221116677|ref|XP_002157639.1| PREDICTED: ras-related protein Rab-8A-like [Hydra magnipapillata]
Length = 207
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 109/160 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T++++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIDLDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ +F+ + +W+R IEE+A+ V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNDKSFENIKNWIRNIEEHAAADVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLA 163
+ ++++ G +D + S KT + +E ++
Sbjct: 125 MNDKRQVSAERGQALAMDHNVKFMETSAKTSANVEEAFIS 164
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D D R++ E G+ A H++ ++ETSAK S NVE+ F+ +A ++ +K+ KL
Sbjct: 121 NKCDMNDKRQVSAERGQALAMDHNVKFMETSAKTSANVEEAFISLARDIKKKMDRKL 177
>gi|224087698|ref|XP_002197665.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Taeniopygia
guttata]
Length = 207
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 92/116 (79%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC + RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +F+ + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILG 120
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK D D R++ E GE A + ++ETSAKA+ N+E F +A ++ K+ +KL
Sbjct: 121 NKCDANDKRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLARDIKAKMDKKLEGN 180
Query: 261 HDRGVGMLTRIYNIKKACGDAKSKPSFL 288
+G +I D + K SF
Sbjct: 181 SPQGSNQGVKITQ------DQQKKSSFF 202
>gi|62702192|gb|AAX93118.1| unknown [Homo sapiens]
Length = 410
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 17 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 76
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 77 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 135
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 58/87 (66%), Positives = 69/87 (79%)
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 1 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 60
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 61 HGEPTITSLYTNWYLETLLRQVSNGHI 87
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 240 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 299
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 300 YSPAIEGHCNNIHCLAK 316
>gi|356568583|ref|XP_003552490.1| PREDICTED: ras-related protein RABD2a-like [Glycine max]
Length = 202
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 91/123 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKC 123
Query: 123 GLK 125
L+
Sbjct: 124 DLE 126
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 193 SNNIH-CMARNKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELM 250
S+N++ + NK D E +R + E + FA + ++ETSAK + NVE+ FM +AA +
Sbjct: 111 SDNVNKLLVGNKCDLEANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIK 170
Query: 251 EKLAEK 256
+++A +
Sbjct: 171 DRMASQ 176
>gi|341886829|gb|EGT42764.1| hypothetical protein CAEBREN_29398 [Caenorhabditis brenneri]
Length = 201
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/114 (55%), Positives = 88/114 (77%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAG 65
+LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWDTAG
Sbjct: 6 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAG 65
Query: 66 QERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
QERFR+IT SYYR AH +I+VYDI+ Q TF+ + WL+EI+ YA V ++LVG
Sbjct: 66 QERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVG 119
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 199 MARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
+ NK D R + T+ +D+A + + +LETSAK+S NVE+ F+ +A+E+ ++
Sbjct: 117 LVGNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMG 173
>gi|302756377|ref|XP_002961612.1| rab family GTPase [Selaginella moellendorffii]
gi|302775546|ref|XP_002971190.1| rab family GTPase [Selaginella moellendorffii]
gi|300161172|gb|EFJ27788.1| rab family GTPase [Selaginella moellendorffii]
gi|300170271|gb|EFJ36872.1| rab family GTPase [Selaginella moellendorffii]
Length = 215
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ F TIG+DF I+TV+++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTVDLDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R + TE G+ A + + ETSAK + NVEK
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVSTERGQALANEFGIKFFETSAKTNLNVEK 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ +LAE
Sbjct: 169 VFFTIAGDIKRRLAE 183
>gi|281203354|gb|EFA77554.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 206
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 101/156 (64%), Gaps = 13/156 (8%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+ ++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ +F+ + W++EI+ YA V R+LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKC 123
Query: 123 GL--------KIVNEMASAAGLLCTVDPALATALAS 150
L + E A +AG+ P L T+ S
Sbjct: 124 DLIEKKVVETNVAREYADSAGI-----PFLETSAKS 154
>gi|281350605|gb|EFB26189.1| hypothetical protein PANDA_004764 [Ailuropoda melanoleuca]
Length = 196
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 90/119 (75%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAG 65
+LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWDTAG
Sbjct: 2 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAG 61
Query: 66 QERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSGL 124
QERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S L
Sbjct: 62 QERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDL 120
>gi|1370162|emb|CAA66447.1| RAB1A [Lotus japonicus]
gi|388504068|gb|AFK40100.1| unknown [Lotus japonicus]
Length = 201
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/135 (48%), Positives = 95/135 (70%), Gaps = 3/135 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++ VGK+CL+ RF + +TIGVDF I+TVE+ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELQGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ +F+ + WL EI+ YA+ V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKS 123
Query: 123 GL---KIVNEMASAA 134
L K+V+ + A
Sbjct: 124 DLVENKVVDTQTAKA 138
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 185 YLASLEGHSNNIHC--MARNKIDR-EDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L ++ ++N+ C + NK D E++ + T+ + FA + +LETSAK S NVE+
Sbjct: 102 WLNEIDRYANDSVCKLLVGNKSDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQA 161
Query: 242 FMQIAAELMEKLAEKLT 258
F+ +AAE+ +K+ + T
Sbjct: 162 FLTMAAEIKKKMGSQPT 178
>gi|357508061|ref|XP_003624319.1| Ras-like protein [Medicago truncatula]
gi|355499334|gb|AES80537.1| Ras-like protein [Medicago truncatula]
Length = 202
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 89/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ + +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVG 120
>gi|295658803|ref|XP_002789961.1| GTP-binding protein ypt1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282044|gb|EEH37610.1| GTP-binding protein ypt1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 201
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 103/156 (66%), Gaps = 13/156 (8%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH + +VYD++ +F+ + WL+EI+ YA+ V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGICIVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 123 GLK--------IVNEMASAAGLLCTVDPALATALAS 150
++ + E A + G+ P L T+ S
Sbjct: 124 DMEDKKAVEYTVAKEFADSLGI-----PFLETSAKS 154
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 199 MARNKIDREDRE-IPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
+ NK D ED++ + V ++FA + +LETSAK++ NVE+ F+ +A ++ E++
Sbjct: 118 LVGNKSDMEDKKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQIKERMG 174
>gi|167391072|ref|XP_001739628.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165896634|gb|EDR23985.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 206
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 89/124 (71%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E+ +LFK++L+G++GVGK+CL+ RF + ATIGVDF IKTV+I+ + +KLQIW
Sbjct: 3 EEKDYLFKLLLIGDSGVGKSCLLLRFADDTYTDTHIATIGVDFKIKTVQIDGKNVKLQIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+IT SYYR A +I+VY + TF + WL+EIE YAS V+++L+G
Sbjct: 63 DTAGQERFRTITSSYYRGAQGIIVVYSVIDLQTFQNVRQWLQEIERYASETVIKLLIGNK 122
Query: 122 SGLK 125
L+
Sbjct: 123 CDLE 126
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 185 YLASLEGHSNN--IHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L +E +++ I + NK D ED R + E G++ A ++ ++E SAK S NV++L
Sbjct: 102 WLQEIERYASETVIKLLIGNKCDLEDERAVTVEQGQELANSLNVSFMEASAKKSLNVDEL 161
Query: 242 FMQIAAELMEKL 253
F +IA ++M+ +
Sbjct: 162 FNKIATDIMKNI 173
>gi|66475702|ref|XP_627667.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|67619548|ref|XP_667653.1| small GTP binding protein rab1a [Cryptosporidium hominis TU502]
gi|32398899|emb|CAD98364.1| small GTP binding protein rab1a, probable [Cryptosporidium parvum]
gi|46229098|gb|EAK89947.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|54658806|gb|EAL37422.1| small GTP binding protein rab1a [Cryptosporidium hominis]
Length = 203
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 89/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+ + N+ +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ + +FD + W++EI+ YA V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMENVNKLLVG 120
>gi|400599215|gb|EJP66919.1| small GTP-binding protein YPTI [Beauveria bassiana ARSEF 2860]
Length = 202
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH + +VYD++ +F+ + WL+EI+ YA+ V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 123 GL 124
+
Sbjct: 124 DM 125
>gi|89257579|gb|ABD65068.1| GTP-binding protein, putative [Brassica oleracea]
Length = 202
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 88/117 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+ YD++ Q +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
>gi|410920033|ref|XP_003973488.1| PREDICTED: nck-associated protein 1-like [Takifugu rubripes]
Length = 1080
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 98/163 (60%), Gaps = 2/163 (1%)
Query: 388 ASRRKKDKNNKKILNEIIK--PGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVW 445
A+RR+K K E+ K PGAES RK R TT+DK+H+ LTELC C V+
Sbjct: 591 AARRRKQKKQMPKKGEVQKEKPGAESLRKDRTVATTVDKMHLMLTELCCCYGLCAEFVVF 650
Query: 446 DFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVH 505
+ P E+L HLE R S +V M +N T EIA+PSELL + AY LQ++ +Y++
Sbjct: 651 NHAITPTEFLLSHLEIRLSEVIVRMANYNQTTQEIARPSELLVGITAYTTSLQSLSSYIN 710
Query: 506 IDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVS 548
ID+TR+ + LQQT+ D+ G +T+ LY W+ E LLR+ S
Sbjct: 711 IDVTRLVRSVRLQQTRPQDARGVQTITTLYTNWFLECLLRQAS 753
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 119/250 (47%), Gaps = 32/250 (12%)
Query: 475 PDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTR------------VFNNALLQQTQR 522
P E+ K S+R V TV+ +H+ +T VFN+A+ T+
Sbjct: 602 PKKGEVQKEKPGAESLRKDRTVATTVDK-MHLMLTELCCCYGLCAEFVVFNHAI-TPTEF 659
Query: 523 MDSHGEKTVAALYIQWYSEVLLRRVSETQV-----KSLNLLNFLRVYT-----VENYVHI 572
+ SH E + SEV++R + Q + LL + YT + +Y++I
Sbjct: 660 LLSHLEIRL--------SEVIVRMANYNQTTQEIARPSELLVGITAYTTSLQSLSSYINI 711
Query: 573 DMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSLNQRAFVSLTA 632
D+TR+ + LQQT+ D+ G +T+ LY W+ E LLR+ S I FV+ +
Sbjct: 712 DVTRLVRSVRLQQTRPQDARGVQTITTLYTNWFLECLLRQASNALIIQCPTLHCFVNQST 771
Query: 633 EGAIPFNAEEFSDVNELRALADLIGPYGMKLLNELSLKAFNAAHEMVHNQSDVNFPRLGQ 692
+ F A+EFSDV E+RALA+L+GPYG+ LNE + + + N L Q
Sbjct: 772 DSEPSFRADEFSDVAEMRALAELLGPYGLNFLNENLMWHITSQVSELKKLVIENMDILVQ 831
Query: 693 MIMDYEVPMK 702
M +YE P K
Sbjct: 832 MKNNYENPEK 841
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 69/98 (70%), Gaps = 4/98 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNID-- 308
+KLAEKL I+++RG G+L R+ IKK C D K++ L++K +E+ IK I KKFPNID
Sbjct: 5 QKLAEKLVILNERGKGVLVRMNYIKKTCADPKTRLPLLTEKGMETAIKYINKKFPNIDFR 64
Query: 309 --IKSVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
I+++ I + +S+++ + S YY +F+D++ F+D VY
Sbjct: 65 GNIQNLISIQRQKSEVLAATSSYYDSFLDVIEFRDHVY 102
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 7/112 (6%)
Query: 96 DCLTDWLREIEEY--ASFKVLRVLVGGTSGLKI---VNEMASAAGLLCTVDPALATALAS 150
DCL D L + Y + L+ + +K+ V E+A+AAG C +DP L A+ S
Sbjct: 874 DCLKDILLKHCPYLMGPIECLKDGIHPEDDIKVTLSVYELAAAAGCQCDIDPTLIAAIGS 933
Query: 151 DKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACFYLASLEGHSNNIHCMA 200
+TD ++E+ L CLL++++AV +P LA + + GH+NNIHC+A
Sbjct: 934 MQTDNTSPDEEYKLFCLLLLYIAVSLPTLASDPNSLFSREHGGHNNNIHCLA 985
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
FN AHEM + SD ++PRLGQM ++YE P KKL+EEF PH
Sbjct: 154 FNCAHEMTNGASDPSYPRLGQMFLEYEHPWKKLTEEFGPH 193
>gi|330799117|ref|XP_003287594.1| Rab GTPase [Dictyostelium purpureum]
gi|325082380|gb|EGC35863.1| Rab GTPase [Dictyostelium purpureum]
Length = 202
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 91/123 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y L K++++G++GVGK+C++ RF F +TIGVDF I+T+E++ ++IKLQIWD
Sbjct: 29 EYDMLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWD 88
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERF++IT SYYR AH LI+VYDI+ +F+ + WL +++ +AS VL+++VG
Sbjct: 89 TAGQERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPSVLKLIVGNKC 148
Query: 123 GLK 125
LK
Sbjct: 149 DLK 151
>gi|440548634|gb|AGC10822.1| Rab-1 [Eriocheir sinensis]
Length = 204
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 89/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD + Q +F+ + WL+EI+ YA V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDTTDQESFNNVKQWLQEIDRYACENVNKLLVG 123
>gi|193690904|ref|XP_001951763.1| PREDICTED: ras-related protein Rab-1A-like [Acyrthosiphon pisum]
Length = 208
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 86/117 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T++++N+ +KLQIWD
Sbjct: 4 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIKLDNKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD + TF L WL EI YA V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDCTDMETFTNLKQWLEEIARYACDNVNKLLVG 120
>gi|350417568|ref|XP_003491486.1| PREDICTED: ras-related protein Rab-10-like [Bombus impatiens]
Length = 200
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 103/155 (66%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTC++ RF+ F +TIG+DF IKTVE+ ++IKLQIWDT
Sbjct: 6 YDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQIWDT 65
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERF +IT SYYR A ++LVYDI+ + TF+ + WLR I+E+A+ V ++++G S
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMILGNKSD 125
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDED 158
++ +++ G + + S K D++ D
Sbjct: 126 MEDKRVVSTGRGEAIAREHGIRFMETSAKADINID 160
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 8/81 (9%)
Query: 180 NEACF-----YLASLEGHSN-NIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F +L +++ H+N ++ M NK D ED R + T GE A+ H + ++ETS
Sbjct: 93 NEKTFENIVKWLRNIDEHANEDVEKMILGNKSDMEDKRVVSTGRGEAIAREHGIRFMETS 152
Query: 232 AKASDNVEKLFMQIAAELMEK 252
AKA N+++ F ++ ++EK
Sbjct: 153 AKADINIDRAFNELTEAILEK 173
>gi|29789271|ref|NP_112354.1| ras-related protein Rab-13 [Rattus norvegicus]
gi|46577668|sp|P35286.2|RAB13_RAT RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|21952483|gb|AAM82588.1|AF525280_1 GTP-binding protein RAB13 [Rattus norvegicus]
gi|149048004|gb|EDM00580.1| RAB13, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
Length = 203
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 89/116 (76%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTCL+ RF + F +TIG+DF I+TVEI +RIKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERF++IT +YYR A +ILVYDI+ + +F+ + +W++ I+E AS V R+L+G
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120
>gi|260792545|ref|XP_002591275.1| hypothetical protein BRAFLDRAFT_114333 [Branchiostoma floridae]
gi|229276479|gb|EEN47286.1| hypothetical protein BRAFLDRAFT_114333 [Branchiostoma floridae]
Length = 209
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y FLFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T++++ ++IKLQIWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIDLDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +F+ + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASADVEKMILG 120
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 202 NKIDREDR-EIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTI 259
NK D EDR ++ + GE A + + ++ETSAK+S NVE+ F + ++ K+ +KL +
Sbjct: 121 NKCDMEDRRQVSRDRGEKLAIEYGVKFMETSAKSSINVEEAFFTLGRDIKAKMDKKLDL 179
>gi|58261356|ref|XP_568088.1| ras-related protein ypt1 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115607|ref|XP_773517.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256143|gb|EAL18870.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230170|gb|AAW46571.1| ras-related protein ypt1, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 205
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/133 (50%), Positives = 95/133 (71%), Gaps = 2/133 (1%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + T+ + WL+EI+ YA V ++LVG S
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDRDTYTNVKQWLQEIDRYAVEGVNKLLVGNKS 124
Query: 123 GL--KIVNEMASA 133
L K V E A A
Sbjct: 125 DLATKKVVEYAEA 137
>gi|321256350|ref|XP_003193368.1| ras-related protein ypt1 [Cryptococcus gattii WM276]
gi|317459838|gb|ADV21581.1| ras-related protein ypt1, putative [Cryptococcus gattii WM276]
gi|405119560|gb|AFR94332.1| GTP-binding protein ypt1 [Cryptococcus neoformans var. grubii H99]
Length = 205
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/133 (50%), Positives = 95/133 (71%), Gaps = 2/133 (1%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + T+ + WL+EI+ YA V ++LVG S
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDRDTYTNVKQWLQEIDRYAVEGVNKLLVGNKS 124
Query: 123 GL--KIVNEMASA 133
L K V E A A
Sbjct: 125 DLATKKVVEYAEA 137
>gi|405964668|gb|EKC30125.1| Ras-related protein Rab-8A [Crassostrea gigas]
Length = 207
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 93/116 (80%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +F+ + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWIRNIEEHASQDVDKMILG 120
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D D R + E GE A H + ++ETSAKAS NVE F +A ++ K+ KL
Sbjct: 121 NKCDMNDKRVVSKEKGEALAIEHGIKFMETSAKASINVEDAFFTLARDIKAKMDRKL 177
>gi|178056588|ref|NP_001116645.1| ras-related protein Rab-1B [Sus scrofa]
gi|122064946|sp|Q06AU7.1|RAB1B_PIG RecName: Full=Ras-related protein Rab-1B
gi|115394758|gb|ABI97173.1| RAB1B [Sus scrofa]
Length = 201
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQER R+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S
Sbjct: 64 TAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
>gi|432908627|ref|XP_004077954.1| PREDICTED: ras-related protein Rab-13-like [Oryzias latipes]
Length = 200
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 107/160 (66%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y FLFK++L+G++GVGKTCL+ RF + + +TIG+DF +KT+E++ +++KLQ+WDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCLIIRFAEDNYNTTYISTIGIDFKVKTIEVDGKKVKLQVWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERF++IT +YYR A +ILVYDI+ + +F+ + +W++ I E AS V R+L+G
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIRENASAGVTRMLLGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLA 163
++ +++ G + A+ S K+ ++ +E A
Sbjct: 125 VEAKRKVSKETGETLAKEHAIRFFETSAKSSINVEESFQA 164
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 202 NKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
NK D E R++ E GE AK H + + ETSAK+S NVE+ F +A ++++K +K
Sbjct: 121 NKCDVEAKRKVSKETGETLAKEHAIRFFETSAKSSINVEESFQALARDILQKSTKK 176
>gi|387017950|gb|AFJ51093.1| ras-related protein Rab-13-like [Crotalus adamanteus]
Length = 200
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 94/125 (75%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ Y LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+TVE+ +RIKLQ+W
Sbjct: 3 KSYDHLFKLLLIGDSGVGKTCLIIRFSEDSFSGTYISTIGIDFKIRTVEVEGKRIKLQVW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERF++IT +YYR A +ILVYDI+ + +F+ + +W++ I+E AS V R+L+G
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 122 SGLKI 126
+++
Sbjct: 123 CDMEV 127
>gi|383864075|ref|XP_003707505.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Megachile
rotundata]
Length = 210
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IEE AS V ++L+G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
L +++ G V+ + S K+ ++ +E
Sbjct: 125 LTEKRQVSKERGEQLAVEYGIKFMETSAKSSINVEE 160
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 207 EDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
E R++ E GE A + + ++ETSAK+S NVE+ F +A ++ K+ +KL
Sbjct: 127 EKRQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKMEKKL 177
>gi|89257659|gb|ABD65146.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 235
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 102/152 (67%), Gaps = 6/152 (3%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAG 65
+LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWDTAG
Sbjct: 48 YLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAG 107
Query: 66 QERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSGLK 125
QERFR+IT SYYR AH +I+ YD++ Q +F+ + WL EI+ YAS V ++LVG + L
Sbjct: 108 QERFRTITSSYYRGAHGIIVTYDVTDQESFNNVKQWLNEIDRYASESVNKLLVGNKNDLT 167
Query: 126 IVNEMASAAGLLCTVDPALATALASDKTDLDE 157
A G+ P L T+ A + T+++E
Sbjct: 168 SQKAFADELGI-----PFLETS-AKNATNVEE 193
>gi|383864073|ref|XP_003707504.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Megachile
rotundata]
Length = 209
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IEE AS V ++L+G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
L +++ G V+ + S K+ ++ +E
Sbjct: 125 LTEKRQVSKERGEQLAVEYGIKFMETSAKSSINVEE 160
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 207 EDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
E R++ E GE A + + ++ETSAK+S NVE+ F +A ++ K+ +KL
Sbjct: 127 EKRQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKMEKKL 177
>gi|340726840|ref|XP_003401760.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Bombus
terrestris]
gi|350421636|ref|XP_003492907.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Bombus
impatiens]
Length = 210
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IEE AS V ++L+G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
L +++ G V+ + S K+ ++ +E
Sbjct: 125 LTEKRQVSKERGEQLAVEYGIKFMETSAKSSINVEE 160
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 207 EDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
E R++ E GE A + + ++ETSAK+S NVE+ F +A ++ K+ +KL
Sbjct: 127 EKRQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKMEKKL 177
>gi|443710459|gb|ELU04712.1| hypothetical protein CAPTEDRAFT_155110 [Capitella teleta]
Length = 198
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 88/116 (75%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTCL+ RF+ F +TIG+DF IKTVE+ ++IKLQIWDT
Sbjct: 6 YDLLFKLLLIGDSGVGKTCLLFRFSDDAFNTTFISTIGIDFKIKTVELGGKKIKLQIWDT 65
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERF +IT SYYR A ++LVYDI+ TFD ++ WLR I+E+A+ V ++++G
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKTFDNISKWLRNIDEHANEDVEKMILG 121
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 185 YLASLEGHSN-NIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L +++ H+N ++ M NK D ED R++P + GE A+ H + +LETSAK++ NVEK
Sbjct: 103 WLRNIDEHANEDVEKMILGNKCDIEDKRQVPKQRGESIAREHGIPFLETSAKSNVNVEKA 162
Query: 242 FMQIAAELMEKLAEKLTIMHDRGV 265
FM +A ++ K K H++ V
Sbjct: 163 FMDLAQAILNKTPSKDADGHNKAV 186
>gi|303734|dbj|BAA02118.1| GTP-binding protein [Pisum sativum]
gi|452359|emb|CAA82707.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738942|prf||2001457K GTP-binding protein
gi|1098293|prf||2115367A small GTP-binding protein
Length = 202
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 89/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ + +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVG 120
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 193 SNNIH-CMARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELM 250
S+N++ + NK D E+R +P E + FA + ++ETSAK S NVE+ FM +A+ +
Sbjct: 111 SDNVNKLLVGNKCDLTENRAVPYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIK 170
Query: 251 EKLAEKLT 258
E++A + T
Sbjct: 171 ERMASQPT 178
>gi|388500972|gb|AFK38552.1| unknown [Medicago truncatula]
Length = 202
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 89/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ + +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVG 120
>gi|328779138|ref|XP_003249596.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Apis mellifera]
Length = 192
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/133 (48%), Positives = 95/133 (71%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTC++ RF+ F +TIG+DF IKTVE+ ++IKLQIWDT
Sbjct: 6 YDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQIWDT 65
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERF +IT SYYR A ++LVYDI+ + TF+ + WLR I+E+A+ V ++++G S
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMILGNKSD 125
Query: 124 LKIVNEMASAAGL 136
++ +A G+
Sbjct: 126 MEDKRVIAREHGI 138
>gi|93279750|pdb|2FU5|C Chain C, Structure Of Rab8 In Complex With Mss4
gi|93279751|pdb|2FU5|D Chain D, Structure Of Rab8 In Complex With Mss4
Length = 183
Score = 140 bits (353), Expect = 2e-30, Method: Composition-based stats.
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD 156
+ +++ G +D + S K +++
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANIN 157
Score = 39.3 bits (90), Expect = 8.1, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKL 253
NK D D R++ E GE A + + ++ETSAKA+ NVE F +A ++ K+
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 173
>gi|71895669|ref|NP_001026675.1| ras-related protein Rab-8A [Gallus gallus]
gi|82231235|sp|Q5F470.1|RAB8A_CHICK RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|60098467|emb|CAH65064.1| hypothetical protein RCJMB04_2k8 [Gallus gallus]
Length = 207
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 92/116 (79%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC + RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +F+ + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILG 120
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK D D R++ E GE A + ++ETSAKA+ N+E F +A ++ K+ +KL
Sbjct: 121 NKCDANDKRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLARDIKAKMDKKLEGN 180
Query: 261 HDRGVGMLTRIYNIKKACGDAKSKPSFL 288
+G +I D + K SF
Sbjct: 181 SPQGSNQGVKI------TPDQQKKSSFF 202
>gi|321473003|gb|EFX83971.1| hypothetical protein DAPPUDRAFT_223052 [Daphnia pulex]
Length = 203
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/133 (48%), Positives = 96/133 (72%), Gaps = 3/133 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T++++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYSESYISTIGVDFKIRTIDLDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD + Q +F+ + WL+EI+ YA V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLQEIDRYACENVNKLLVGNKC 123
Query: 123 GL---KIVNEMAS 132
L K+V+ A+
Sbjct: 124 DLSTKKVVDYAAA 136
>gi|340720309|ref|XP_003398583.1| PREDICTED: ras-related protein Rab-10-like isoform 2 [Bombus
terrestris]
Length = 192
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/133 (48%), Positives = 95/133 (71%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTC++ RF+ F +TIG+DF IKTVE+ ++IKLQIWDT
Sbjct: 6 YDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQIWDT 65
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERF +IT SYYR A ++LVYDI+ + TF+ + WLR I+E+A+ V ++++G S
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMILGNKSD 125
Query: 124 LKIVNEMASAAGL 136
++ +A G+
Sbjct: 126 MEDKRVIAREHGI 138
>gi|340726838|ref|XP_003401759.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Bombus
terrestris]
gi|350421632|ref|XP_003492906.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Bombus
impatiens]
Length = 209
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IEE AS V ++L+G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
L +++ G V+ + S K+ ++ +E
Sbjct: 125 LTEKRQVSKERGEQLAVEYGIKFMETSAKSSINVEE 160
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 207 EDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
E R++ E GE A + + ++ETSAK+S NVE+ F +A ++ K+ +KL
Sbjct: 127 EKRQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKMEKKL 177
>gi|440291312|gb|ELP84581.1| hypothetical protein EIN_171560 [Entamoeba invadens IP1]
Length = 207
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 89/126 (70%), Gaps = 1/126 (0%)
Query: 1 MEDYK-FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQ 59
M D K +LFK++L+G++GVGK+CL+ RF + ATIGVDF IKTV+IN +KLQ
Sbjct: 1 MSDPKDYLFKLLLIGDSGVGKSCLLLRFADDTYTDTHIATIGVDFKIKTVQINGLNVKLQ 60
Query: 60 IWDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
IWDTAGQERFR+IT SYYR A +I+VY + TF + WL+EIE YAS V+++L+G
Sbjct: 61 IWDTAGQERFRTITSSYYRGAQGIIVVYSVIDLQTFQNVRQWLQEIERYASESVIKLLIG 120
Query: 120 GTSGLK 125
L+
Sbjct: 121 NKCDLE 126
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 196 IHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
I + NK D ED R + E G++ A ++ ++E+SAK + NV++LF +IA ++M+ L
Sbjct: 115 IKLLIGNKCDLEDERAVTVEQGQELANSLNVSFMESSAKKALNVDELFNKIATDIMKNLQ 174
Query: 255 EKLTIMHDRGVGMLTRIYNIKKACGDAKSKP 285
T L++ G+ K+KP
Sbjct: 175 TSNTPSKTDDKANLSK--------GNGKAKP 197
>gi|327356550|gb|EGE85407.1| GTPase Rab1/YPT1 [Ajellomyces dermatitidis ATCC 18188]
Length = 232
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 102/155 (65%), Gaps = 13/155 (8%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + +KLQIWDT
Sbjct: 36 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 95
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT SYYR AH + +VYD++ +F+ + WL+EI+ YA+ V ++LVG S
Sbjct: 96 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 155
Query: 124 LK--------IVNEMASAAGLLCTVDPALATALAS 150
++ + E A + G+ P L T+ S
Sbjct: 156 MEDKKAVEYTVAKEFADSLGI-----PFLETSAKS 185
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 199 MARNKIDREDRE-IPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
+ NK D ED++ + V ++FA + +LETSAK++ NVE+ F+ +A ++ E++
Sbjct: 149 LVGNKSDMEDKKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQIKERMG 205
>gi|322801510|gb|EFZ22171.1| hypothetical protein SINV_12925 [Solenopsis invicta]
Length = 177
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 105/156 (67%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYD++ +F+ + +W+R IEE AS V ++L+G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNDKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
L ++ G V+ + S K+ ++ +E
Sbjct: 125 LTDKRQVTKERGEQLAVEYGIKFMETSAKSSINVEE 160
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK + D R++ E GE A + + ++ETSAK+S NVE+ F +A ++ K+ +KL
Sbjct: 121 NKCELTDKRQVTKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKMEKKL 177
>gi|449530083|ref|XP_004172026.1| PREDICTED: ras-related protein RABD1-like isoform 2 [Cucumis
sativus]
Length = 187
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 106/158 (67%), Gaps = 4/158 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++ VGK+CL+ RF + +TIGVDF I+TVE++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ +F+ + WL EI+ YA+ V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKC 123
Query: 123 GL---KIVNEMASAAGLLCTVDPALATALASDKTDLDE 157
L K+V+ + A P L T+ A D T++++
Sbjct: 124 DLVENKVVDTQTAKAFADELGIPFLETS-AKDSTNVEQ 160
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 185 YLASLEGHSNNIHC--MARNKIDR-EDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L ++ ++N+ C + NK D E++ + T+ + FA + +LETSAK S NVE+
Sbjct: 102 WLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQA 161
Query: 242 FMQIAAELMEKLA 254
F+ +AAE+ +K
Sbjct: 162 FLTMAAEIKKKWG 174
>gi|116791141|gb|ABK25871.1| unknown [Picea sitchensis]
Length = 203
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 88/117 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKMIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEINRYASENVNKLLVG 120
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 199 MARNKIDREDREIPT-EVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
+ NK D R + + + G+DFA + +LETSAK + NVE+ FM +A+E+ +++A +
Sbjct: 118 LVGNKCDLTTRRVVSYQTGKDFADSLGIPFLETSAKNATNVEEAFMTMASEIKKRMASQ 176
>gi|46138717|ref|XP_391049.1| YPT1_NEUCR GTP-binding protein ypt1 [Gibberella zeae PH-1]
gi|408390594|gb|EKJ69986.1| hypothetical protein FPSE_09831 [Fusarium pseudograminearum CS3096]
Length = 202
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH + +VYD++ +F+ + WL+EI+ YA+ V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 123 GL 124
+
Sbjct: 124 DM 125
>gi|296817263|ref|XP_002848968.1| GTP-binding protein ypt1 [Arthroderma otae CBS 113480]
gi|327301503|ref|XP_003235444.1| GTP-binding protein ypt1 [Trichophyton rubrum CBS 118892]
gi|238839421|gb|EEQ29083.1| GTP-binding protein ypt1 [Arthroderma otae CBS 113480]
gi|326462796|gb|EGD88249.1| GTP-binding protein ypt1 [Trichophyton rubrum CBS 118892]
gi|326468927|gb|EGD92936.1| GTP-binding protein ypt1 [Trichophyton tonsurans CBS 112818]
gi|326480093|gb|EGE04103.1| Ras family protein [Trichophyton equinum CBS 127.97]
Length = 201
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 98/142 (69%), Gaps = 8/142 (5%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH + +VYD++ +F+ + WL+EI+ YA+ V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATQGVNKLLVGNKS 123
Query: 123 GLK--------IVNEMASAAGL 136
++ + E A + G+
Sbjct: 124 DMEDKKVVEYTVAKEFADSLGI 145
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 199 MARNKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
+ NK D ED+++ V ++FA + +LETSAK + NVE+ F+ +A ++ E++
Sbjct: 118 LVGNKSDMEDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMG 174
>gi|392567789|gb|EIW60964.1| GTP-binding protein ypt1 [Trametes versicolor FP-101664 SS1]
Length = 203
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 89/123 (72%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ Y +LFK++L+G++GVGK+CL+ RF + F +TIGVDF I+T+E+ + +KLQIW
Sbjct: 3 DGYDYLFKLLLIGDSGVGKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIELEGKTVKLQIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+I +YYR A +I+VYD++ Q TF + W+ EIE YAS V ++++G
Sbjct: 63 DTAGQERFRTIAAAYYRGAQGIIMVYDVTEQETFSNVKGWITEIERYASEGVKKLIIGNK 122
Query: 122 SGL 124
S L
Sbjct: 123 SDL 125
>gi|383848305|ref|XP_003699792.1| PREDICTED: ras-related protein Rab-10-like isoform 2 [Megachile
rotundata]
Length = 192
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/133 (48%), Positives = 95/133 (71%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTC++ RF+ F +TIG+DF IKTVE+ ++IKLQIWDT
Sbjct: 6 YDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQIWDT 65
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERF +IT SYYR A ++LVYDI+ + TF+ + WLR I+E+A+ V ++++G S
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMILGNKSD 125
Query: 124 LKIVNEMASAAGL 136
++ +A G+
Sbjct: 126 MEDRRVIAREHGI 138
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 14/80 (17%)
Query: 180 NEACF-----YLASLEGHSN-NIHCMA-RNKIDREDREIPTEVGEDFAKRHDMYYLETSA 232
NE F +L +++ H+N ++ M NK D EDR + A+ H + ++ETSA
Sbjct: 93 NEKTFENIVKWLRNIDEHANEDVEKMILGNKSDMEDRRV-------IAREHGIRFMETSA 145
Query: 233 KASDNVEKLFMQIAAELMEK 252
KA+ N+++ F ++A ++EK
Sbjct: 146 KANINIDRAFSELAEAILEK 165
>gi|209881799|ref|XP_002142337.1| Ras small GTPase RIC1/ypt1 protein [Cryptosporidium muris RN66]
gi|209557943|gb|EEA07988.1| Ras small GTPase RIC1/ypt1 protein, putative [Cryptosporidium muris
RN66]
Length = 203
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 89/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+ + N+ +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTITLENKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ + +FD + W++EI+ YA V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMENVNKLLVG 120
>gi|116199373|ref|XP_001225498.1| GTP-binding protein ypt1 [Chaetomium globosum CBS 148.51]
gi|88179121|gb|EAQ86589.1| GTP-binding protein ypt1 [Chaetomium globosum CBS 148.51]
Length = 203
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH + +VYD++ +F+ + WL+EI+ YA+ V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 123 GL 124
+
Sbjct: 124 DM 125
>gi|67470746|ref|XP_651336.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|13537429|dbj|BAB40669.1| small GTPase Rab1A [Entamoeba histolytica]
gi|56468058|gb|EAL45948.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449708204|gb|EMD47708.1| small GTPase Rab1A, putative [Entamoeba histolytica KU27]
Length = 205
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 88/123 (71%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E+ +LFK++L+G++GVGK+CL+ RF + ATIGVDF IKTV+I+ + +KLQIW
Sbjct: 3 EEKDYLFKLLLIGDSGVGKSCLLLRFADDTYTDTHIATIGVDFKIKTVQIDGKNVKLQIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+IT SYYR A +I+VY + TF + WL+EIE YAS V+++L+G
Sbjct: 63 DTAGQERFRTITSSYYRGAQGIIVVYSVIDLQTFQNVRQWLQEIERYASETVIKLLIGNK 122
Query: 122 SGL 124
L
Sbjct: 123 CDL 125
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 185 YLASLEGHSNN--IHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L +E +++ I + NK D +D R + E G++ A ++ ++E SAK S NV++L
Sbjct: 102 WLQEIERYASETVIKLLIGNKCDLDDERAVTVEQGQELANSLNVSFMEASAKKSLNVDEL 161
Query: 242 FMQIAAELMEKL 253
F++IA ++M+ +
Sbjct: 162 FIRIATDIMKNI 173
>gi|255076991|ref|XP_002502151.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226517416|gb|ACO63409.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 202
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 92/121 (76%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ Y L K++L+G++GVGK+CL+ RF++ F TIG+DF I+TVE++ +R+KLQIW
Sbjct: 6 QQYDHLIKLLLIGDSGVGKSCLLLRFSEDQFTSSFITTIGIDFKIRTVELDGKRVKLQIW 65
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+IT +YYR AH ++L YD++ + +F+ + +W+R IE++AS V +VLVG
Sbjct: 66 DTAGQERFRTITNAYYRGAHGILLTYDVTDEGSFNNVRNWMRNIEQHASDGVSKVLVGNK 125
Query: 122 S 122
S
Sbjct: 126 S 126
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 185 YLASLEGHSNN--IHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
++ ++E H+++ + NK D E+ R I TE GE AK + + ETSAKA+ NV
Sbjct: 105 WMRNIEQHASDGVSKVLVGNKSDAEEKRVISTEQGEALAKEFGIPFFETSAKANTNVNDA 164
Query: 242 FMQIA 246
F IA
Sbjct: 165 FFAIA 169
>gi|171689264|ref|XP_001909572.1| hypothetical protein [Podospora anserina S mat+]
gi|170944594|emb|CAP70705.1| unnamed protein product [Podospora anserina S mat+]
Length = 203
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 98/142 (69%), Gaps = 8/142 (5%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH + +VYD++ +F+ + WL+EI+ YA+ V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 123 GL--------KIVNEMASAAGL 136
+ ++ E A + G+
Sbjct: 124 DMADKKVVDYQVAKEFADSLGI 145
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 199 MARNKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
+ NK D D+++ +V ++FA + +LETSAK + NVE+ F+ +A ++ E++ +
Sbjct: 118 LVGNKSDMADKKVVDYQVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSSI 177
>gi|346324592|gb|EGX94189.1| GTP-binding protein ypt1 [Cordyceps militaris CM01]
Length = 215
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 90/121 (74%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + +KLQIWDT
Sbjct: 18 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 77
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT SYYR AH + +VYD++ +F+ + WL+EI+ YA+ V ++LVG S
Sbjct: 78 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 137
Query: 124 L 124
+
Sbjct: 138 M 138
>gi|328767509|gb|EGF77558.1| hypothetical protein BATDEDRAFT_20617 [Batrachochytrium
dendrobatidis JAM81]
Length = 208
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 90/116 (77%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +L K++L+G++GVGK+CL+ RF+ F P TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 9 YDYLIKLLLIGDSGVGKSCLLLRFSDDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 68
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++L YD++ + +F+ + +W+R IE++AS V ++L+G
Sbjct: 69 AGQERFRTITTAYYRGAMGILLTYDVTDERSFNNIRNWIRNIEQHASEGVNKILIG 124
>gi|449431876|ref|XP_004133726.1| PREDICTED: ras-related protein RABD1-like isoform 2 [Cucumis
sativus]
Length = 201
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 106/158 (67%), Gaps = 4/158 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++ VGK+CL+ RF + +TIGVDF I+TVE++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ +F+ + WL EI+ YA+ V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKC 123
Query: 123 GL---KIVNEMASAAGLLCTVDPALATALASDKTDLDE 157
L K+V+ + A P L T+ A D T++++
Sbjct: 124 DLVENKVVDTQTAKAFADELGIPFLETS-AKDSTNVEQ 160
Score = 46.2 bits (108), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 185 YLASLEGHSNNIHC--MARNKIDR-EDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L ++ ++N+ C + NK D E++ + T+ + FA + +LETSAK S NVE+
Sbjct: 102 WLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQA 161
Query: 242 FMQIAAELMEKLAEKLTIMHDRG-VGMLTRIYNIKKAC 278
F+ +AAE+ +K+ + T G V M + K +C
Sbjct: 162 FLTMAAEIKKKMGSQPTSSKSSGNVQMKGQPIQQKSSC 199
>gi|384244926|gb|EIE18423.1| Rab8/RabE-family small GTPase [Coccomyxa subellipsoidea C-169]
Length = 210
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 91/118 (77%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+DY +L K++L+G++GVGK+CL+ RF++ F TIG+DF IK + I+N+ IKLQIW
Sbjct: 6 QDYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTSSFITTIGIDFKIKKILIDNKWIKLQIW 65
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V +VLVG
Sbjct: 66 DTAGQERFRTITSAYYRGAMGILLVYDVTDESSFNNIRNWMRNIEQHASDNVNKVLVG 123
>gi|328871755|gb|EGG20125.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 212
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 90/116 (77%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +L K++L+G++GVGK+CL+ RF++ F P TIG+DF I+T+E+ +RIKLQIWDT
Sbjct: 15 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDT 74
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYD++ + +F + +W+R IE++A+ V ++L+G
Sbjct: 75 AGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATESVNKMLIG 130
>gi|402225755|gb|EJU05816.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 213
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 91/123 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFKVVL+G++GVGK+ L+ RFT+ F P +TIGV+F +++E++ + +K QIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNPDSKSTIGVEFATRSLEVDGKVVKAQIWD 65
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQER+R+IT +YYR A +LVYDIS QPTF + WL+E+ ++A ++ +LVG S
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDISKQPTFANVARWLKELRDHADSSIVVMLVGNKS 125
Query: 123 GLK 125
LK
Sbjct: 126 DLK 128
>gi|297814341|ref|XP_002875054.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
gi|297320891|gb|EFH51313.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
Length = 203
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDSVNKLLVGNKC 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 202 NKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
NK D +R +P E + FA + ++ETSAK + NVE+ FM +AA + +++A +
Sbjct: 121 NKCDLAANRAVPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKDRMASQ 176
>gi|354478940|ref|XP_003501672.1| PREDICTED: ras-related protein Rab-13-like [Cricetulus griseus]
gi|81909832|sp|Q5KTJ6.1|RAB13_MESAU RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|57157445|dbj|BAD83700.1| Rab13 [Mesocricetus auratus]
Length = 203
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 89/116 (76%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTCL+ RF + F +TIG+DF I+TVEI +RIKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERF++IT +YYR A +ILVYDI+ + +F+ + +W++ I+E AS V R+L+G
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120
>gi|260787287|ref|XP_002588685.1| hypothetical protein BRAFLDRAFT_131227 [Branchiostoma floridae]
gi|229273853|gb|EEN44696.1| hypothetical protein BRAFLDRAFT_131227 [Branchiostoma floridae]
Length = 203
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 89/116 (76%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTC++ RF+ F +TIG+DF IKTVE++ ++IKLQIWDT
Sbjct: 6 YDLLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQIWDT 65
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERF +IT SYYR A ++LVYDI+ +FD ++ WLR I+E+A+ V R+L+G
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNPKSFDNISKWLRNIDEHANEDVERMLIG 121
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 185 YLASLEGHSNNI--HCMARNKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L +++ H+N + NK D ED+ I T+ GE+ AK H + + ETSAKA+ N+EK
Sbjct: 103 WLRNIDEHANEDVERMLIGNKCDMEDKRIVGTDRGENIAKEHGIRFFETSAKANINIEKA 162
Query: 242 FMQIAAELMEKLAEK 256
FM +A +++ K K
Sbjct: 163 FMTLAEDILRKTPSK 177
>gi|66816599|ref|XP_642309.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208511|sp|P34140.2|RAB1B_DICDI RecName: Full=Ras-related protein Rab-1B; Flags: Precursor
gi|60470126|gb|EAL68106.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 206
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 103/156 (66%), Gaps = 13/156 (8%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+ ++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ +F+ + W++EI+ YA V R+LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKC 123
Query: 123 GL---KIVN-----EMASAAGLLCTVDPALATALAS 150
L KIV+ E A + G+ P L T+ S
Sbjct: 124 DLIEKKIVDTSTAREYADSVGI-----PFLETSAKS 154
>gi|29841143|gb|AAP06156.1| SJCHGC02833 protein [Schistosoma japonicum]
gi|226468172|emb|CAX76313.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468174|emb|CAX76314.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468176|emb|CAX76315.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468178|emb|CAX76316.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472646|emb|CAX71009.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472648|emb|CAX71010.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472650|emb|CAX71011.1| Rab-protein 8 [Schistosoma japonicum]
Length = 198
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 89/117 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +LFK++L+G++GVGK+CL+ RF F +TIGVDF I+T++++ + +KLQIWD
Sbjct: 4 DYDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDLDGKVVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR A +I+VYD++ + +F + WL+EIE YA+ V R+LVG
Sbjct: 64 TAGQERFRTITSSYYRGAQGIIIVYDVTDKTSFINVKSWLQEIEHYANSTVNRLLVG 120
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 9/84 (10%)
Query: 185 YLASLEGHSNNI--HCMARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L +E ++N+ + NK D + R + T +FAK H M +LETSAK + NVE
Sbjct: 102 WLQEIEHYANSTVNRLLVGNKCDLPKSRAVDTVDAMNFAKEHQMPFLETSAKEAINVEDA 161
Query: 242 FMQIAAEL------MEKLAEKLTI 259
FM++A ++ M+ ++ +T+
Sbjct: 162 FMEMARQIKASTAPMQSMSSNVTV 185
>gi|242807972|ref|XP_002485067.1| secretion related GTPase SrgB/Ypt1 [Talaromyces stipitatus ATCC
10500]
gi|218715692|gb|EED15114.1| secretion related GTPase SrgB/Ypt1 [Talaromyces stipitatus ATCC
10500]
Length = 201
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 103/156 (66%), Gaps = 13/156 (8%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH + +VYD++ +F+ + WL+EI+ YA+ V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 123 GLK--------IVNEMASAAGLLCTVDPALATALAS 150
++ + E A + G+ P L T+ S
Sbjct: 124 DMEDKKVVEYTVAKEFADSLGI-----PFLETSAKS 154
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 199 MARNKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
+ NK D ED+++ V ++FA + +LETSAK++ NVE+ F+ +A ++ E++
Sbjct: 118 LVGNKSDMEDKKVVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQIKERMG 174
>gi|307171708|gb|EFN63443.1| Ras-related protein Rab-10 [Camponotus floridanus]
Length = 200
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 91/122 (74%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTC++ RF+ F +TIG+DF IKTVE+ ++IKLQIWDT
Sbjct: 6 YDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQIWDT 65
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERF +IT SYYR A ++LVYDI+ + TF+ + WLR I+E+A+ V ++++G S
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMILGNKSD 125
Query: 124 LK 125
++
Sbjct: 126 ME 127
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 50/81 (61%), Gaps = 8/81 (9%)
Query: 180 NEACF-----YLASLEGHSN-NIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F +L +++ H+N ++ M NK D E+ R + TE GE A+ H + ++ETS
Sbjct: 93 NEKTFENIVKWLRNIDEHANEDVEKMILGNKSDMEEKRVVSTEKGEAIAREHGIRFMETS 152
Query: 232 AKASDNVEKLFMQIAAELMEK 252
AKA+ N+++ F ++A +++K
Sbjct: 153 AKANINIDRAFSELAEAILDK 173
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,336,668,177
Number of Sequences: 23463169
Number of extensions: 403832836
Number of successful extensions: 1328216
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 14256
Number of HSP's successfully gapped in prelim test: 7774
Number of HSP's that attempted gapping in prelim test: 1290438
Number of HSP's gapped (non-prelim): 36025
length of query: 730
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 580
effective length of database: 8,839,720,017
effective search space: 5127037609860
effective search space used: 5127037609860
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)