BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17467
(730 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P55162|HEM_DROME Membrane-associated protein Hem OS=Drosophila melanogaster GN=Hem
PE=2 SV=1
Length = 1126
Score = 258 bits (658), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 122/152 (80%), Positives = 133/152 (87%)
Query: 401 LNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLE 460
++I KPG ESYRKTRE+LTTMDKLHMALTELCFAINYC + VW+F FAPREYL Q+LE
Sbjct: 654 FDDIRKPGDESYRKTREDLTTMDKLHMALTELCFAINYCPTVNVWEFAFAPREYLCQNLE 713
Query: 461 SRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQT 520
RFSR LVGMVMFN +T EIAKPSELLASVRAYMNVLQTVENYVHID+TRVFNN LLQQT
Sbjct: 714 HRFSRDLVGMVMFNQETMEIAKPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQT 773
Query: 521 QRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
Q +DSHGEKT+AALY WYSEVLLRRVS +
Sbjct: 774 QALDSHGEKTIAALYNTWYSEVLLRRVSAGNI 805
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 82/93 (88%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+K+AEKL I++DRG+G+LTRIYNIKKACGD KSKP FLS+KSLES IK IVK+FPNID+K
Sbjct: 10 QKIAEKLIILNDRGLGILTRIYNIKKACGDTKSKPGFLSEKSLESSIKFIVKRFPNIDVK 69
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
++ I I+++I+KSLSLYY+TFVDLL FKD V
Sbjct: 70 GLNAIVNIKAEIIKSLSLYYHTFVDLLDFKDNV 102
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 68/92 (73%)
Query: 109 ASFKVLRVLVGGTSGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMV 168
+S K + + G +++ +EMASAAGLLC VDP LAT L S K + DE EH+ ACLLMV
Sbjct: 937 SSVKDFQEHLPGGDQIRVASEMASAAGLLCKVDPTLATTLKSKKPEFDEGEHLTACLLMV 996
Query: 169 FVAVCIPKLARNEACFYLASLEGHSNNIHCMA 200
FVAV IPKLARNE FY A+++GHSNN HCMA
Sbjct: 997 FVAVSIPKLARNENSFYRATIDGHSNNTHCMA 1028
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 39/46 (84%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L +NAA+E+ +NQ+D FPRLGQMI+DYEVP+KKL+EEFIPH +
Sbjct: 152 LGLYNAAYELQNNQADTGFPRLGQMILDYEVPLKKLAEEFIPHQRL 197
>sp|Q923S9|RAB30_MOUSE Ras-related protein Rab-30 OS=Mus musculus GN=Rab30 PE=2 SV=1
Length = 203
Score = 222 bits (565), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 99/119 (83%), Positives = 111/119 (93%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 121
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 11/83 (13%)
Query: 173 CIPKLARNEACFYLASLEGHSNN--IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLE 229
C+P+ +L +E +++N I + NKID E RE+ + E+F++ DMYYLE
Sbjct: 99 CLPE--------WLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLE 150
Query: 230 TSAKASDNVEKLFMQIAAELMEK 252
TSAK SDNVEKLF+ +A L+ +
Sbjct: 151 TSAKESDNVEKLFLDLACRLISE 173
>sp|Q15771|RAB30_HUMAN Ras-related protein Rab-30 OS=Homo sapiens GN=RAB30 PE=1 SV=2
Length = 203
Score = 222 bits (565), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 99/119 (83%), Positives = 111/119 (93%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 121
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 11/83 (13%)
Query: 173 CIPKLARNEACFYLASLEGHSNN--IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLE 229
C+P+ +L +E +++N I + NKID E RE+ + E+F++ DMYYLE
Sbjct: 99 CLPE--------WLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLE 150
Query: 230 TSAKASDNVEKLFMQIAAELMEK 252
TSAK SDNVEKLF+ +A L+ +
Sbjct: 151 TSAKESDNVEKLFLDLACRLISE 173
>sp|Q17QB7|RAB30_BOVIN Ras-related protein Rab-30 OS=Bos taurus GN=RAB30 PE=2 SV=1
Length = 203
Score = 222 bits (565), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 99/119 (83%), Positives = 111/119 (93%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 121
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 11/83 (13%)
Query: 173 CIPKLARNEACFYLASLEGHSNN--IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLE 229
C+P+ +L +E +++N I + NKID E RE+ + E+F++ DMYYLE
Sbjct: 99 CLPE--------WLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLE 150
Query: 230 TSAKASDNVEKLFMQIAAELMEK 252
TSAK SDNVEKLF+ +A L+ +
Sbjct: 151 TSAKESDNVEKLFLDLACRLISE 173
>sp|B0S6R1|NCKP1_DANRE Nck-associated protein 1 OS=Danio rerio GN=nckap1 PE=3 SV=1
Length = 1128
Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 659 KPGVESMRKNRLLVTNLDKLHTALSELCFSINYVPNMMVWEHTFTPREYLTSHLEIRFTK 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 719 SIVGMTMYNQTTQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 779 HGEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 735 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 795 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 853
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRG+GMLTRIYNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGIGMLTRIYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSMPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYAHEMTHGSSDREYPRLGQMIVDYENPLKKMMEEFVPH 199
>sp|P28660|NCKP1_MOUSE Nck-associated protein 1 OS=Mus musculus GN=Nckap1 PE=1 SV=2
Length = 1128
Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 659 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMAVWEHTFTPREYLTSHLEIRFTK 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 719 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 779 HGEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 735 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 795 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 853
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 199
>sp|Q9Y2A7|NCKP1_HUMAN Nck-associated protein 1 OS=Homo sapiens GN=NCKAP1 PE=1 SV=1
Length = 1128
Score = 209 bits (533), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 659 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTK 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 719 SIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 779 HGEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 735 KPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 795 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 853
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 199
>sp|Q640K3|NCKP1_XENLA Nck-associated protein 1 OS=Xenopus laevis GN=nckap1 PE=2 SV=1
Length = 1128
Score = 209 bits (532), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 114/147 (77%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 659 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYAPNMVVWEHTFTPREYLTSHLEIRFTK 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 719 SIVGMTMYNQVTQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 779 HGEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 142 bits (359), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 546 RVSETQVKSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAAL 600
+V++ K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +L
Sbjct: 728 QVTQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSL 787
Query: 601 YIQWYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYG 660
Y WY E LLR+VS G+I + +AFV+L E + FNAEE+SD++E+RAL++L+GPYG
Sbjct: 788 YTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRALSELLGPYG 847
Query: 661 MKLLNE 666
MK L+E
Sbjct: 848 MKFLSE 853
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTDL--DEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSETISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N +HEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYSHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 199
>sp|P55161|NCKP1_RAT Nck-associated protein 1 OS=Rattus norvegicus GN=Nckap1 PE=2 SV=1
Length = 1128
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 94/147 (63%), Positives = 113/147 (76%)
Query: 406 KPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSR 465
KPG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF++
Sbjct: 659 KPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMAVWEHTFTPREYLTSHLEIRFTK 718
Query: 466 ALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDS 525
++VGM M+N T EIAKPSELL SVR YM VLQ++ENYV ID+TRVFNN LLQQTQ +DS
Sbjct: 719 SIVGMTMYNQATQEIAKPSELLTSVREYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS 778
Query: 526 HGEKTVAALYIQWYSEVLLRRVSETQV 552
HGE T+ +LY WY E LLR+VS +
Sbjct: 779 HGEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 139 bits (350), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 553 KSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSE 607
K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+ +LY WY E
Sbjct: 735 KPSELLTSVREYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE 794
Query: 608 VLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+GPYGMK L+E
Sbjct: 795 TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSE 853
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYAHEMTHGASDREYPRLGQMIVDYEHPLKKMMEEFVPH 199
>sp|A7RU46|NAPA_NEMVE Nck-associated protein 1 homolog OS=Nematostella vectensis GN=napA
PE=3 SV=1
Length = 1120
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 108/160 (67%)
Query: 388 ASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDF 447
+ RR KDKN K + E PG ES+RK+RE LT++D ++LTELC AI + I VW+
Sbjct: 641 SERRTKDKNKKNVHVEFKPPGIESFRKSRETLTSLDTKLLSLTELCHAITHTEAIPVWEH 700
Query: 448 TFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHID 507
FAP+EYL LE F++A+V M ++ D IA+PSE+L++V+A M+ L+++ENY +D
Sbjct: 701 IFAPKEYLSSQLEEFFAKAVVSMAQYDIDNQRIARPSEVLSNVKAMMSSLRSLENYTGVD 760
Query: 508 MTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRV 547
RVFN+ LLQQTQ DS G T+ +Y WY +V LRRV
Sbjct: 761 TARVFNHVLLQQTQPQDSQGANTITQMYTTWYLDVFLRRV 800
Score = 119 bits (299), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 74/93 (79%), Gaps = 2/93 (2%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI+++RG GMLTRIYNIKKAC D KS+P FL DK+LE IK IV+KFP +D K
Sbjct: 10 QKLAEKLTILNERGEGMLTRIYNIKKACSDPKSRPGFLMDKALEPSIKYIVRKFPQMDTK 69
Query: 311 S--VSGISQIRSDIVKSLSLYYYTFVDLLHFKD 341
+ + + I+++++K LS YY+TFVD++ FKD
Sbjct: 70 ATQLQAVQSIQNEVMKGLSNYYFTFVDIMEFKD 102
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 50/81 (61%)
Query: 120 GTSGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLAR 179
G + ++V+EMA++AG C VDP L AL + K ED+ + LL+VFVAV +P LA
Sbjct: 946 GNNDRQVVDEMATSAGQECVVDPLLCAALRTLKEKKSEDDILTWSLLLVFVAVGLPSLAY 1005
Query: 180 NEACFYLASLEGHSNNIHCMA 200
+A Y LE H NN HC++
Sbjct: 1006 KDASEYNGELEAHDNNAHCIS 1026
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 35/43 (81%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
L FN A EM + +S+ +FPRLGQMI+DY+ P+KKL+E+F+PH
Sbjct: 154 LGLFNHAFEMRNGRSEESFPRLGQMILDYDSPLKKLAEQFVPH 196
>sp|Q53B90|RAB43_RAT Ras-related protein Rab-43 OS=Rattus norvegicus GN=Rab43 PE=2 SV=1
Length = 210
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 111/164 (67%), Gaps = 13/164 (7%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 11 EHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIW 70
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDIS + TF + W+ ++ +YA ++++L+G
Sbjct: 71 DTAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNK 130
Query: 122 SGLKIVNEMASAAG--------LLCTVDPALATALASDKTDLDE 157
S L + E+ A +LC ++ + A D ++++E
Sbjct: 131 SDLADLREVPLAEAQSLAEHYDILCAIETS-----AKDSSNVEE 169
Score = 40.8 bits (94), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 193 SNNIHCMARNKIDRED-REIPTEVGEDFAKRHDMY-YLETSAKASDNVEKLFMQIAAELM 250
SN + + NK D D RE+P + A+ +D+ +ETSAK S NVE+ F ++A EL+
Sbjct: 120 SNIVQLLIGNKSDLADLREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATELI 179
>sp|Q86YS6|RAB43_HUMAN Ras-related protein Rab-43 OS=Homo sapiens GN=RAB43 PE=1 SV=1
Length = 212
Score = 159 bits (402), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 112/164 (68%), Gaps = 13/164 (7%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDI+ + +F + W+ ++ +YA ++++L+G
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNK 132
Query: 122 SGLKIVNEMASAAG--------LLCTVDPALATALASDKTDLDE 157
S L + E++ A +LC ++ + A D ++++E
Sbjct: 133 SDLSELREVSLAEAQSLAEHYDILCAIETS-----AKDSSNVEE 171
Score = 37.7 bits (86), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 193 SNNIHCMARNKID-REDREIPTEVGEDFAKRHDMY-YLETSAKASDNVEKLFMQIAAELM 250
SN + + NK D E RE+ + A+ +D+ +ETSAK S NVE+ F+++A EL+
Sbjct: 122 SNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELI 181
>sp|Q8CG50|RAB43_MOUSE Ras-related protein Rab-43 OS=Mus musculus GN=Rab43 PE=1 SV=1
Length = 210
Score = 159 bits (401), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 110/164 (67%), Gaps = 13/164 (7%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 11 EHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIW 70
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDIS + TF + W+ ++ +YA ++++L+G
Sbjct: 71 DTAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNK 130
Query: 122 SGLKIVNE--------MASAAGLLCTVDPALATALASDKTDLDE 157
S L E +A +LC ++ + A D ++++E
Sbjct: 131 SDLADFREVPLAEAQSLAEHYDILCAIETS-----AKDSSNVEE 169
Score = 40.8 bits (94), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 193 SNNIHCMARNKIDRED-REIPTEVGEDFAKRHDMY-YLETSAKASDNVEKLFMQIAAELM 250
SN + + NK D D RE+P + A+ +D+ +ETSAK S NVE+ F ++A EL+
Sbjct: 120 SNIVQLLIGNKSDLADFREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATELI 179
>sp|P55160|NCKPL_HUMAN Nck-associated protein 1-like OS=Homo sapiens GN=NCKAP1L PE=1 SV=3
Length = 1127
Score = 155 bits (393), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 111/174 (63%), Gaps = 9/174 (5%)
Query: 379 RKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELTTMDKLHMALTELCFAINY 438
+KTR++ Q + + +++ KPGAES+RK R +T MDKLH+ LTEL +N+
Sbjct: 642 KKTRKQRQTPRKGEPERD---------KPGAESHRKNRSIVTNMDKLHLNLTELALTMNH 692
Query: 439 CTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEIAKPSELLASVRAYMNVLQ 498
+ V++ T P EYL HLE+R +RA+V + +N T EI +PSELLA V+AY+ +Q
Sbjct: 693 VYSFSVFEHTIFPSEYLSSHLEARLNRAIVWLAGYNATTQEIVRPSELLAGVKAYIGFIQ 752
Query: 499 TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSETQV 552
++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S +
Sbjct: 753 SLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTI 806
Score = 119 bits (298), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 75/104 (72%)
Query: 563 VYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSL 622
+ ++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY E LLR+ S+G I S
Sbjct: 751 IQSLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTIILSP 810
Query: 623 NQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+AFVSL EG F+AEEFSD++E+RALA+L+GPYGMK L+E
Sbjct: 811 AMQAFVSLPREGEQNFSAEEFSDISEMRALAELLGPYGMKFLSE 854
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 76/106 (71%), Gaps = 4/106 (3%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+E +K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMEPSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY 344
KFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVY 106
Score = 76.6 bits (187), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + FY
Sbjct: 961 ELASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSLPLLATDPSSFYS 1020
Query: 187 ASLEGHSNNIHCMARNKI 204
+G++NNIHC+ + I
Sbjct: 1021 IEKDGYNNNIHCLTKAII 1038
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L + + +N AHEM+H D +F RLGQM+++Y+ P+K
Sbjct: 129 RSYLDLIVTYTSVILLLSRIEDRRILIGMYNCAHEMLHGHGDPSFARLGQMVLEYDHPLK 188
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 189 KLTEEFGPH 197
>sp|P35294|RAB19_MOUSE Ras-related protein Rab-19 OS=Mus musculus GN=Rab19 PE=2 SV=3
Length = 217
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 119/192 (61%), Gaps = 23/192 (11%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E+ +LFKV+L+G++ VGKTC+V+ F GV+ Q TIGVDF ++++EI+ +++K+Q+W
Sbjct: 12 ENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNK 131
Query: 122 SGL--------KIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVC 173
S L + +A GLL ++ + A + ++DE VFV +
Sbjct: 132 SDLWEKRHVLFEDACTLAEKHGLLAVLETS-----AKESRNIDE----------VFVLMA 176
Query: 174 IPKLARNEACFY 185
+ARN Y
Sbjct: 177 KELIARNSLHLY 188
>sp|P01123|YPT1_YEAST GTP-binding protein YPT1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YPT1 PE=1 SV=2
Length = 206
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 95/123 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+GN+GVGK+CL+ RF+ + +TIGVDF IKTVE++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR +H +I+VYD++ Q +F+ + WL+EI+ YA+ VL++LVG
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKC 123
Query: 123 GLK 125
LK
Sbjct: 124 DLK 126
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 196 IHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
+ + NK D +D R + +V ++FA + M +LETSA S NVE F+ +A ++ E ++
Sbjct: 115 LKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMS 174
Query: 255 EK 256
++
Sbjct: 175 QQ 176
>sp|Q5M7U5|RAB19_RAT Ras-related protein Rab-19 OS=Rattus norvegicus GN=Rab19 PE=2 SV=1
Length = 217
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 121/192 (63%), Gaps = 23/192 (11%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E+ +LFKV+L+G++ VGKTC+V+ F GV+ Q TIGVDF ++++EI+ +++K+Q+W
Sbjct: 12 ENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNK 131
Query: 122 SGL----KIVNE----MASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVC 173
S L ++ E +A GLL ++ + A + ++DE VFV +
Sbjct: 132 SDLWEKRHVLFEDACTLAEKYGLLAVLETS-----AKESRNIDE----------VFVLMA 176
Query: 174 IPKLARNEACFY 185
+ARN Y
Sbjct: 177 KELIARNSLHLY 188
>sp|Q2HJI8|RAB8B_BOVIN Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1
Length = 207
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 109/156 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + AS K+ ++ +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLEASAKSSMNVEE 160
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D D R++ E GE A + + +LE S
Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLEAS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGVGMLTRI 271
AK+S NVE+ F +A ++M KL K+ + G G +I
Sbjct: 152 AKSSMNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGPVKI 191
>sp|Q05974|RAB1A_LYMST Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1
Length = 205
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 93/122 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG S
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKS 126
Query: 123 GL 124
L
Sbjct: 127 DL 128
Score = 35.0 bits (79), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 27/40 (67%)
Query: 215 VGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
+++A + + +LETSAK + NVE+ FM +AAE+ ++
Sbjct: 138 TAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMG 177
>sp|P31584|YPTV1_VOLCA GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1
Length = 203
Score = 149 bits (375), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 70/135 (51%), Positives = 99/135 (73%), Gaps = 3/135 (2%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGNKS 123
Query: 123 ---GLKIVNEMASAA 134
G K+V+ A+ A
Sbjct: 124 DLTGKKVVDYQAAKA 138
Score = 37.0 bits (84), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+LA ++ + S N++ + NK D +++ + + FA + +LETSAK + NVE+
Sbjct: 102 WLAEIDRYASENVNKLLVGNKSDLTGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQA 161
Query: 242 FMQIAAELMEKLAEK 256
FM +AAE+ ++A +
Sbjct: 162 FMTMAAEIKNRMASQ 176
>sp|A4D1S5|RAB19_HUMAN Ras-related protein Rab-19 OS=Homo sapiens GN=RAB19 PE=2 SV=2
Length = 217
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 95/123 (77%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK++L+G++ VGKTC+V+ F GV+ Q TIGVDF +++++I+ +++K+Q+W
Sbjct: 12 ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + V+ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNK 131
Query: 122 SGL 124
L
Sbjct: 132 CDL 134
>sp|Q28IZ3|RAB19_XENTR Ras-related protein Rab-19 OS=Xenopus tropicalis GN=rab19 PE=2 SV=1
Length = 213
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 91/123 (73%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ + FLFK++L+G++ VGKTC+V RF GVF Q TIGVDF ++ + IN +++K+Q+W
Sbjct: 10 DPFDFLFKIILIGDSNVGKTCVVHRFQSGVFAHNQQNTIGVDFTVRNMNINGKKVKVQVW 69
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAH I+ YDI+ + +F+ + W+ E E+Y + ++ +L+G
Sbjct: 70 DTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYEAEKYGAANLMMMLIGNK 129
Query: 122 SGL 124
S L
Sbjct: 130 SDL 132
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 185 YLASLEGHSNNIHCMARNKID-REDREIPTEVGEDFAKRHDMY-YLETSAKASDNVEKLF 242
Y A G +N + + NK D E R+I E A++H + LETSAK S NV+++F
Sbjct: 111 YEAEKYGAANLMMMLIGNKSDLAEKRQILFEEACTLAEKHGLLAVLETSAKESHNVDEVF 170
Query: 243 MQIAAELMEK 252
+ +A EL+ +
Sbjct: 171 LLMAKELIAR 180
>sp|P70550|RAB8B_RAT Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1
Length = 207
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ + +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEE 160
Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D D R++ E GE A + + +LETS
Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGVGMLTRI 271
AK+S NVE+ F +A ++M KL K+ + G G +I
Sbjct: 152 AKSSTNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGPVKI 191
>sp|P61028|RAB8B_MOUSE Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1
Length = 207
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ + +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEE 160
Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D D R++ E GE A + + +LETS
Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGVGMLTRI 271
AK+S NVE+ F +A ++M KL K+ + G G +I
Sbjct: 152 AKSSTNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGPVKI 191
>sp|Q5REC9|RAB8B_PONAB Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1
Length = 207
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ + +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEE 160
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D D R++ E GE A + + +LETS
Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGVGMLTRI 271
AK+S NVE+ F +A ++M KL K+ + G G +I
Sbjct: 152 AKSSTNVEEAFFTLARDIMTKLNRKMNDSNSAGAGGPVKI 191
>sp|Q92930|RAB8B_HUMAN Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2
Length = 207
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ + +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEE 160
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKIDRED-REIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D D R++ E GE A + + +LETS
Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKLTIMHDRGVGMLTRI 271
AK+S NVE+ F +A ++M KL K+ + G G +I
Sbjct: 152 AKSSANVEEAFFTLARDIMTKLNRKMNDSNSAGAGGPVKI 191
>sp|P22128|RAB8_DIPOM Ras-related protein Rab-8 OS=Diplobatis ommata PE=2 SV=1
Length = 210
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 108/160 (67%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+TVE++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++ VYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLA 163
+ +++ G +D + S K+ ++ +E +
Sbjct: 125 MNEKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFIT 164
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 8/86 (9%)
Query: 180 NEACF-----YLASLEGH-SNNIHCMA-RNKID-REDREIPTEVGEDFAKRHDMYYLETS 231
NE F ++ ++E H S+++ M NK D E R++ E GE A + + +LETS
Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNEKRQVSKERGEKLAIDYGIKFLETS 151
Query: 232 AKASDNVEKLFMQIAAELMEKLAEKL 257
AK+S NVE+ F+ +A ++M KL +K+
Sbjct: 152 AKSSINVEEAFITLARDIMTKLNKKM 177
>sp|Q39571|YPTC1_CHLRE GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1
PE=3 SV=1
Length = 203
Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
Score = 37.7 bits (86), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 193 SNNIH-CMARNKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELM 250
S N++ + NK D +++ V + FA + +LETSAK + NVE+ FM +AAE+
Sbjct: 111 SENVNKLLVGNKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIK 170
Query: 251 EKLAEK 256
++A +
Sbjct: 171 NRMASQ 176
>sp|Q3ZC27|RAB19_BOVIN Ras-related protein Rab-19 OS=Bos taurus GN=RAB19 PE=2 SV=1
Length = 217
Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 94/123 (76%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK++L+G++ VGKTC+V+ F GV+ Q TIGVDF ++ +EI+ +++K+Q+W
Sbjct: 12 ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYMEAQQNTIGVDFTVRALEIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNK 131
Query: 122 SGL 124
L
Sbjct: 132 CDL 134
>sp|P20791|RAB8B_DICDI Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B
PE=2 SV=1
Length = 203
Score = 145 bits (367), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 91/116 (78%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y FL K++L+G++GVGK+CL+ RF+ G F P ATIG+DF I+T+E+ +RIKLQIWDT
Sbjct: 12 YDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDT 71
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYD++ + +F + +W+R IE++AS V ++L+G
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIG 127
Score = 35.4 bits (80), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 185 YLASLEGH-SNNIHCM-ARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
++ ++E H S++++ M NK D E + + + G+ A + + +LETSAK S NVE+
Sbjct: 109 WIRNIEQHASDSVNKMLIGNKCDMTEKKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEA 168
Query: 242 FMQIAAELMEKLAE 255
F+ +A ++ +++ +
Sbjct: 169 FIGLAKDIKKRMID 182
>sp|Q05737|YPTM2_MAIZE GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1
Length = 203
Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 193 SNNIH-CMARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELM 250
S+N++ + NK D ++ + TE + FA + ++ETSAK + NV++ FM +AA +
Sbjct: 111 SDNVNKLLVGNKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIK 170
Query: 251 EKLAEKLTIMHDRGVGMLTR--IYNIKKAC 278
+++A + + R + R N K +C
Sbjct: 171 DRMASQPAAANARPATVQIRGQPVNQKTSC 200
>sp|O24466|RAE1A_ARATH Ras-related protein RABE1a OS=Arabidopsis thaliana GN=RABE1A PE=1
SV=1
Length = 216
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVG 127
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 185 YLASLEGHS----NNIHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H+ N I + +D R +P G+ A + M + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDSVNKILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F IA ++ ++LA+
Sbjct: 169 VFFSIAKDIKQRLAD 183
>sp|P22125|RAB1_DIPOM Ras-related protein ORAB-1 OS=Diplobatis ommata PE=2 SV=1
Length = 202
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 120
Score = 37.0 bits (84), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 199 MARNKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
+ NK D +++ ++FA + +LETSAK + NVE+ FM +AAE+ +++
Sbjct: 118 LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA 177
Query: 258 T 258
T
Sbjct: 178 T 178
>sp|Q6NYB7|RAB1A_RAT Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3
Length = 205
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
Score = 36.2 bits (82), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 193 SNNIH-CMARNKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELM 250
S N++ + NK D +++ ++FA + +LETSAK + NVE+ FM +AAE+
Sbjct: 114 SENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIK 173
Query: 251 EKLAEKLT 258
+++ T
Sbjct: 174 KRMGPGAT 181
>sp|P62821|RAB1A_MOUSE Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3
Length = 205
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
Score = 36.2 bits (82), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 193 SNNIH-CMARNKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELM 250
S N++ + NK D +++ ++FA + +LETSAK + NVE+ FM +AAE+
Sbjct: 114 SENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIK 173
Query: 251 EKLAEKLT 258
+++ T
Sbjct: 174 KRMGPGAT 181
>sp|P62820|RAB1A_HUMAN Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3
Length = 205
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
Score = 36.2 bits (82), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 193 SNNIH-CMARNKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELM 250
S N++ + NK D +++ ++FA + +LETSAK + NVE+ FM +AAE+
Sbjct: 114 SENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIK 173
Query: 251 EKLAEKLT 258
+++ T
Sbjct: 174 KRMGPGAT 181
>sp|P62822|RAB1A_CANFA Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3
Length = 205
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
Score = 36.2 bits (82), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 193 SNNIH-CMARNKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELM 250
S N++ + NK D +++ ++FA + +LETSAK + NVE+ FM +AAE+
Sbjct: 114 SENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIK 173
Query: 251 EKLAEKLT 258
+++ T
Sbjct: 174 KRMGPGAT 181
>sp|P34139|RAB1A_DICDI Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A
PE=2 SV=2
Length = 202
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 92/122 (75%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+N + IKLQIWD
Sbjct: 4 DYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + TF+ + WL+EI+ +A V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 219 FAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
FA + +LETSAK S NVE+ FM +A E+ +L
Sbjct: 139 FADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRLT 174
>sp|Q52NJ2|RAB1A_PIG Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3
Length = 205
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 91/117 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVG 123
Score = 36.6 bits (83), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 193 SNNIH-CMARNKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELM 250
S N++ + NK D +++ ++FA + +LETSAK + NVE+ FM +AAE+
Sbjct: 114 SENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIK 173
Query: 251 EKLAEKLT 258
+++ T
Sbjct: 174 KRMGPGAT 181
>sp|Q39433|RB1BV_BETVU Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1
Length = 215
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAEKLT 258
+F IA ++ ++LA+ T
Sbjct: 169 VFFSIARDIKQRLADSDT 186
>sp|P11620|YPT1_SCHPO GTP-binding protein ypt1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt1 PE=1 SV=2
Length = 203
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 105/157 (66%), Gaps = 2/157 (1%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T E+ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA V R+LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKS 123
Query: 123 GL--KIVNEMASAAGLLCTVDPALATALASDKTDLDE 157
+ K V E + A +++ A D T++++
Sbjct: 124 DMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQ 160
Score = 37.4 bits (85), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 199 MARNKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
+ NK D D+++ V ++FA ++ +LETSAK S NVE+ F+ ++ ++ E++
Sbjct: 118 LVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMG 174
>sp|P28186|RAE1C_ARATH Ras-related protein RABE1c OS=Arabidopsis thaliana GN=RABE1C PE=1
SV=1
Length = 216
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 92/117 (78%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 241 LFMQIAAELMEKLAE 255
+F I ++ ++L++
Sbjct: 169 VFFSIGRDIKQRLSD 183
>sp|Q5R4A3|RAB8A_PONAB Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1
Length = 207
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKRD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD 156
+ +++ G +D + S K +++
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANIN 157
Score = 40.4 bits (93), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D D R++ E GE A + + ++ETSAKA+ NVE F +A ++ K+ +KL
Sbjct: 121 NKRDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL 177
>sp|Q01890|YPT1_PHYIN Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1
PE=3 SV=1
Length = 201
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 91/122 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YA V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
Score = 42.0 bits (97), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 33/46 (71%)
Query: 209 REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
R + T+ ++FA+ + +LETSAK + NVEK FM +AA++ +++A
Sbjct: 129 RVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMA 174
>sp|Q4UB16|RAB1_THEAN Ras-related protein Rab-1 OS=Theileria annulata GN=rab1 PE=3 SV=1
Length = 220
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 93/120 (77%), Gaps = 1/120 (0%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
M++Y +LFK++++G++G GK+ L+ RF + +TIGVDF IKTV+I+N IKLQI
Sbjct: 1 MKEYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTD-WLREIEEYASFKVLRVLVG 119
WDTAGQERFR+IT +YYR AH +I VYD++ + +FD +T+ WL++I++YA+ V ++L+G
Sbjct: 61 WDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIG 120
Score = 40.0 bits (92), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 193 SNNIHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELME 251
SN + NKID D R + + + A++++M Y+E SAK NVEK F IA L +
Sbjct: 112 SNVCKLLIGNKIDLVDSRVVLADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKD 171
Query: 252 KLAE 255
K+ +
Sbjct: 172 KVTQ 175
>sp|P35280|RAB8A_RAT Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2
Length = 207
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD 156
+ +++ G +D + S K +++
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANIN 157
Score = 41.2 bits (95), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D D R++ E GE A + + ++ETSAKA+ NVE F +A ++ K+ +KL
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL 177
>sp|P55258|RAB8A_MOUSE Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2
Length = 207
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD 156
+ +++ G +D + S K +++
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANIN 157
Score = 41.2 bits (95), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D D R++ E GE A + + ++ETSAKA+ NVE F +A ++ K+ +KL
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL 177
>sp|Q4R5P1|RAB8A_MACFA Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2
SV=1
Length = 207
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD 156
+ +++ G +D + S K +++
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANIN 157
Score = 41.2 bits (95), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D D R++ E GE A + + ++ETSAKA+ NVE F +A ++ K+ +KL
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL 177
>sp|P61006|RAB8A_HUMAN Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1
Length = 207
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD 156
+ +++ G +D + S K +++
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANIN 157
Score = 41.2 bits (95), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D D R++ E GE A + + ++ETSAKA+ NVE F +A ++ K+ +KL
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL 177
>sp|P61007|RAB8A_CANFA Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1
Length = 207
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD 156
+ +++ G +D + S K +++
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANIN 157
Score = 41.2 bits (95), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D D R++ E GE A + + ++ETSAKA+ NVE F +A ++ K+ +KL
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL 177
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 248,338,596
Number of Sequences: 539616
Number of extensions: 9871188
Number of successful extensions: 35439
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 247
Number of HSP's that attempted gapping in prelim test: 33376
Number of HSP's gapped (non-prelim): 1845
length of query: 730
length of database: 191,569,459
effective HSP length: 125
effective length of query: 605
effective length of database: 124,117,459
effective search space: 75091062695
effective search space used: 75091062695
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)