Your job contains 1 sequence.
>psy17467
MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGG
TSGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARN
EACFYLASLEGHSNNIHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEK
LFMQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQI
VKKFPNIDIKSVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVYLSGHFDAQIASRRKKD
KNNKKILNEIIKPGAESYRKTREEAQIASRRKKDKNNKKILNEIIKPGAESYRKTREELT
TMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFNPDTSEI
AKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYS
EVLLRRVSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAAL
YIQWYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYG
MKLLNELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSMRPMRWF
IIKVMSTSHV
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17467
(730 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0011771 - symbol:Hem "HEM-protein" species:7227 "D... 641 4.5e-99 3
ZFIN|ZDB-GENE-030131-4426 - symbol:nckap1 "NCK-associated... 508 1.7e-74 2
MGI|MGI:1355333 - symbol:Nckap1 "NCK-associated protein 1... 507 3.3e-74 2
UNIPROTKB|F1RYL3 - symbol:NCKAP1 "Uncharacterized protein... 506 5.6e-74 2
UNIPROTKB|Q9Y2A7 - symbol:NCKAP1 "Nck-associated protein ... 506 5.7e-74 2
RGD|61939 - symbol:Nckap1 "NCK-associated protein 1" spec... 502 2.8e-73 2
UNIPROTKB|E1C6G9 - symbol:NCKAP1 "Uncharacterized protein... 505 9.5e-73 2
UNIPROTKB|F1MPZ9 - symbol:NCKAP1 "Uncharacterized protein... 506 8.0e-62 2
FB|FBgn0031882 - symbol:Rab30 "Rab30" species:7227 "Droso... 578 4.2e-56 1
UNIPROTKB|E1B876 - symbol:NCKAP1L "Uncharacterized protei... 385 1.0e-55 3
RGD|1312032 - symbol:Nckap1l "NCK associated protein 1 li... 375 2.8e-55 3
UNIPROTKB|E2QVX0 - symbol:NCKAP1L "Uncharacterized protei... 377 1.8e-54 3
UNIPROTKB|P55160 - symbol:NCKAP1L "Nck-associated protein... 369 4.9e-53 3
WB|WBGene00004282 - symbol:rab-30 species:6239 "Caenorhab... 543 2.1e-52 1
UNIPROTKB|Q17QB7 - symbol:RAB30 "Ras-related protein Rab-... 534 1.9e-51 1
UNIPROTKB|E2RG98 - symbol:RAB30 "Uncharacterized protein"... 534 1.9e-51 1
UNIPROTKB|Q15771 - symbol:RAB30 "Ras-related protein Rab-... 534 1.9e-51 1
MGI|MGI:1923235 - symbol:Rab30 "RAB30, member RAS oncogen... 534 1.9e-51 1
UNIPROTKB|D4AA97 - symbol:Rab30 "RAB30, member RAS oncoge... 534 1.9e-51 1
UNIPROTKB|E9PMJ1 - symbol:RAB30 "Ras-related protein Rab-... 534 1.9e-51 1
UNIPROTKB|E9PNB9 - symbol:RAB30 "Ras-related protein Rab-... 534 1.9e-51 1
UNIPROTKB|E9PS06 - symbol:RAB30 "Ras-related protein Rab-... 534 1.9e-51 1
UNIPROTKB|F2Z5W1 - symbol:RAB30 "Uncharacterized protein"... 534 1.9e-51 1
UNIPROTKB|Q6MZH2 - symbol:DKFZp686J07132 "Ras-related pro... 527 1.1e-50 1
UNIPROTKB|F1NWF1 - symbol:RAB30 "Uncharacterized protein"... 526 1.3e-50 1
UNIPROTKB|E9PRF7 - symbol:RAB30 "Ras-related protein Rab-... 511 5.2e-49 1
ZFIN|ZDB-GENE-040718-250 - symbol:rab30 "RAB30, member RA... 509 8.5e-49 1
WB|WBGene00001580 - symbol:gex-3 species:6239 "Caenorhabd... 304 3.2e-46 3
UNIPROTKB|P55163 - symbol:gex-3 "Membrane-associated prot... 304 3.2e-46 3
UNIPROTKB|E9PJQ5 - symbol:RAB30 "Ras-related protein Rab-... 457 6.6e-43 1
SGD|S000001856 - symbol:YPT1 "Rab family GTPase" species:... 364 2.2e-40 2
UNIPROTKB|P22127 - symbol:P22127 "Ras-related protein Rab... 329 4.7e-39 2
RGD|1565263 - symbol:Rab19 "RAB19, member RAS oncogene fa... 362 9.4e-38 2
UNIPROTKB|Q3ZC27 - symbol:RAB19 "Ras-related protein Rab-... 358 9.9e-38 2
ASPGD|ASPL0000016908 - symbol:srgB species:162425 "Emeric... 341 1.2e-37 2
MGI|MGI:2443284 - symbol:Rab26 "RAB26, member RAS oncogen... 336 1.6e-37 2
UNIPROTKB|E2RRA2 - symbol:RAB19 "Uncharacterized protein"... 358 2.0e-37 2
UNIPROTKB|E1C0Q9 - symbol:RAB26 "Uncharacterized protein"... 334 2.1e-37 2
RGD|620890 - symbol:Rab26 "RAB26, member RAS oncogene fam... 336 3.4e-37 2
UNIPROTKB|P51156 - symbol:Rab26 "Ras-related protein Rab-... 336 3.4e-37 2
UNIPROTKB|E2R2R0 - symbol:RAB26 "Uncharacterized protein"... 338 5.3e-37 2
UNIPROTKB|F1RFB0 - symbol:LOC100739113 "Uncharacterized p... 336 6.9e-37 2
UNIPROTKB|F1P278 - symbol:RAB19 "Uncharacterized protein"... 348 7.7e-37 2
ZFIN|ZDB-GENE-070822-21 - symbol:zgc:171927 "zgc:171927" ... 350 1.2e-36 2
RGD|620880 - symbol:Rab13 "RAB13, member RAS oncogene fam... 331 3.1e-36 2
UNIPROTKB|Q9ULW5 - symbol:RAB26 "Ras-related protein Rab-... 330 3.2e-36 2
SGD|S000001889 - symbol:SEC4 "Rab family GTPase essential... 325 3.3e-36 2
ZFIN|ZDB-GENE-040801-185 - symbol:rab18b "RAB18B, member ... 311 3.8e-36 2
MGI|MGI:1927232 - symbol:Rab13 "RAB13, member RAS oncogen... 328 4.1e-36 2
ZFIN|ZDB-GENE-040718-2 - symbol:rab15 "RAB15, member RAS ... 335 4.8e-36 2
UNIPROTKB|Q5KTJ6 - symbol:RAB13 "Ras-related protein Rab-... 332 5.0e-36 2
RGD|1565300 - symbol:Rab43 "RAB43, member RAS oncogene fa... 395 5.0e-36 1
UNIPROTKB|Q5ZLG1 - symbol:RAB18 "Ras-related protein Rab-... 311 6.2e-36 2
UNIPROTKB|Q0IIG8 - symbol:RAB18 "Ras-related protein Rab-... 309 6.3e-36 2
UNIPROTKB|Q9NP72 - symbol:RAB18 "Ras-related protein Rab-... 309 6.3e-36 2
UNIPROTKB|I3LC07 - symbol:RAB18 "Uncharacterized protein"... 309 6.3e-36 2
UNIPROTKB|Q5R5H5 - symbol:RAB18 "Ras-related protein Rab-... 309 6.3e-36 2
MGI|MGI:102790 - symbol:Rab18 "RAB18, member RAS oncogene... 309 6.3e-36 2
RGD|1308905 - symbol:Rab18 "RAB18, member RAS oncogene fa... 309 6.3e-36 2
RGD|3527 - symbol:Rab12 "RAB12, member RAS oncogene famil... 323 7.0e-36 2
MGI|MGI:1917084 - symbol:Rab43 "RAB43, member RAS oncogen... 393 8.4e-36 1
UNIPROTKB|Q86YS6 - symbol:RAB43 "Ras-related protein Rab-... 390 1.8e-35 1
UNIPROTKB|Q58DS5 - symbol:RAB13 "Ras-related protein Rab-... 324 2.3e-35 2
UNIPROTKB|P51153 - symbol:RAB13 "Ras-related protein Rab-... 324 2.3e-35 2
UNIPROTKB|F1RFW5 - symbol:RAB13 "Uncharacterized protein"... 324 2.3e-35 2
UNIPROTKB|I3L5L9 - symbol:RAB13 "Uncharacterized protein"... 324 2.3e-35 2
UNIPROTKB|I3LSL6 - symbol:I3LSL6 "Uncharacterized protein... 322 2.4e-35 2
UNIPROTKB|E2RP90 - symbol:RAB43 "Uncharacterized protein"... 388 3.0e-35 1
UNIPROTKB|F1P1G4 - symbol:RAB43 "Uncharacterized protein"... 387 3.8e-35 1
ZFIN|ZDB-GENE-050417-216 - symbol:zgc:112183 "zgc:112183"... 323 3.8e-35 2
UNIPROTKB|J9NRZ2 - symbol:RAB18 "Uncharacterized protein"... 300 6.1e-35 2
DICTYBASE|DDB_G0284985 - symbol:rab1D "Rab GTPase" specie... 325 7.7e-35 2
ZFIN|ZDB-GENE-050522-555 - symbol:rab12 "RAB12, member RA... 319 2.1e-34 2
DICTYBASE|DDB_G0289827 - symbol:rab18 "Rab GTPase" specie... 286 2.3e-34 2
UNIPROTKB|B2RAA6 - symbol:RAB26 "cDNA, FLJ94800, Homo sap... 311 3.8e-34 2
UNIPROTKB|Q9H082 - symbol:RAB33B "Ras-related protein Rab... 307 5.0e-34 2
DICTYBASE|DDB_G0277101 - symbol:rab11C "Rab GTPase" speci... 308 6.3e-34 2
UNIPROTKB|Q5R615 - symbol:RAB33B "Ras-related protein Rab... 308 6.3e-34 2
UNIPROTKB|I3LK86 - symbol:RAB33B "Uncharacterized protein... 307 6.3e-34 2
CGD|CAL0001430 - symbol:YPT1 species:5476 "Candida albica... 375 7.7e-34 1
UNIPROTKB|Q5AI00 - symbol:YPT1 "Likely RAB family GTP bin... 375 7.7e-34 1
UNIPROTKB|A4FUD7 - symbol:RAB33B "RAB33B protein" species... 307 8.0e-34 2
UNIPROTKB|C9JJQ5 - symbol:RAB19 "Ras-related protein Rab-... 359 1.5e-33 2
ZFIN|ZDB-GENE-060825-25 - symbol:zgc:153788 "zgc:153788" ... 372 1.6e-33 1
RGD|1308353 - symbol:Rab33b "RAB33B, member RAS oncogene ... 304 1.7e-33 2
WB|WBGene00004277 - symbol:rab-18 species:6239 "Caenorhab... 294 2.4e-33 2
MGI|MGI:1330805 - symbol:Rab33b "RAB33B, member of RAS on... 302 2.8e-33 2
UNIPROTKB|F1N908 - symbol:RAB35 "Uncharacterized protein"... 319 3.1e-33 2
WB|WBGene00004278 - symbol:rab-19 species:6239 "Caenorhab... 369 3.5e-33 1
WB|WBGene00004284 - symbol:rab-35 species:6239 "Caenorhab... 315 4.1e-33 2
UNIPROTKB|F1MSJ9 - symbol:RAB35 "Uncharacterized protein"... 323 4.8e-33 2
UNIPROTKB|E9PBQ0 - symbol:RAB43 "Ras-related protein Rab-... 367 5.8e-33 1
UNIPROTKB|P59190 - symbol:RAB15 "Ras-related protein Rab-... 317 6.4e-33 2
RGD|735172 - symbol:Rab15 "RAB15, member RAS oncogene fam... 317 6.4e-33 2
ZFIN|ZDB-GENE-050809-122 - symbol:rab33ba "RAB33B, member... 316 6.5e-33 2
UNIPROTKB|Q5ZHV1 - symbol:RAB33B "Ras-related protein Rab... 299 9.7e-33 2
UNIPROTKB|Q15286 - symbol:RAB35 "Ras-related protein Rab-... 320 1.0e-32 2
UNIPROTKB|F2Z4Z0 - symbol:RAB35 "Uncharacterized protein"... 320 1.0e-32 2
MGI|MGI:1924657 - symbol:Rab35 "RAB35, member RAS oncogen... 320 1.0e-32 2
RGD|1306362 - symbol:Rab35 "RAB35, member RAS oncogene fa... 320 1.0e-32 2
WARNING: Descriptions of 1574 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0011771 [details] [associations]
symbol:Hem "HEM-protein" species:7227 "Drosophila
melanogaster" [GO:0007417 "central nervous system development"
evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA;NAS]
[GO:0001555 "oocyte growth" evidence=NAS] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007010 "cytoskeleton
organization" evidence=IMP] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030031 "cell
projection assembly" evidence=IMP] [GO:0008360 "regulation of cell
shape" evidence=IMP] [GO:0030866 "cortical actin cytoskeleton
organization" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008407 "chaeta morphogenesis"
evidence=IMP] [GO:0007520 "myoblast fusion" evidence=IMP]
[GO:0006911 "phagocytosis, engulfment" evidence=IMP] [GO:0030036
"actin cytoskeleton organization" evidence=IMP] [GO:0000902 "cell
morphogenesis" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0031209 "SCAR complex" evidence=IPI]
GO:GO:0016021 GO:GO:0005886 GO:GO:0001764 GO:GO:0006911
EMBL:AE014296 GO:GO:0008360 GO:GO:0030866 GO:GO:0007528
GO:GO:0007417 GO:GO:0031209 GO:GO:0007409 GO:GO:0007520
GO:GO:0030031 GO:GO:0008407 eggNOG:NOG287735
GeneTree:ENSGT00390000016619 KO:K05750 OMA:SCFPYAL
InterPro:IPR019137 Pfam:PF09735 EMBL:X80028 EMBL:AY118579
PIR:S57832 RefSeq:NP_524214.1 UniGene:Dm.2500
ProteinModelPortal:P55162 DIP:DIP-18694N IntAct:P55162
MINT:MINT-282249 STRING:P55162 PaxDb:P55162 PRIDE:P55162
EnsemblMetazoa:FBtr0078510 GeneID:40462 KEGG:dme:Dmel_CG5837
UCSC:CG5837-RA CTD:40462 FlyBase:FBgn0011771 InParanoid:P55162
OrthoDB:EOG4P2NH3 PhylomeDB:P55162 GenomeRNAi:40462 NextBio:818898
Bgee:P55162 GermOnline:CG5837 Uniprot:P55162
Length = 1126
Score = 641 (230.7 bits), Expect = 4.5e-99, Sum P(3) = 4.5e-99
Identities = 146/295 (49%), Positives = 186/295 (63%)
Query: 407 PGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRA 466
PG ESYRKTRE+LTTMDKLHMALTELCFAINYC + VW+F FAPREYL Q+LE RFSR
Sbjct: 660 PGDESYRKTREDLTTMDKLHMALTELCFAINYCPTVNVWEFAFAPREYLCQNLEHRFSRD 719
Query: 467 LVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSH 526
LVGMVMFN +T EIAKPSELLASVRAYMNVLQTVENYVHID+TRVFNN LLQQTQ +DSH
Sbjct: 720 LVGMVMFNQETMEIAKPSELLASVRAYMNVLQTVENYVHIDITRVFNNCLLQQTQALDSH 779
Query: 527 GEKTVAALYIQWYSEVLLRRVSETQVK-SLNLLNFLRVYTVENYVHIDMTRVFN-NALLQ 584
GEKT+AALY WYSEVLLRRVS + S+N F+ + + E +V + + N L
Sbjct: 780 GEKTIAALYNTWYSEVLLRRVSAGNIVFSINQKAFVPI-SPEGWVPFNPQEFSDLNELRA 838
Query: 585 QTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIP-FNAEEF 643
+ + +G KT+ + W+ + +V S N+ ++L P E+F
Sbjct: 839 LAELVGPYGIKTLNET-LMWH---IANQVQELKSLVSTNKEVLITLRTSFDKPEVMKEQF 894
Query: 644 SDVNELRALADLIGPYGMKLLNELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYE 698
+ ++ + + G+ + N HE + + D P L + D++
Sbjct: 895 KRLQDVDRVLQRMTIIGVIICFR------NLVHEALVDVLDKRIPFLLSSVKDFQ 943
Score = 347 (127.2 bits), Expect = 4.5e-99, Sum P(3) = 4.5e-99
Identities = 66/93 (70%), Positives = 82/93 (88%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+K+AEKL I++DRG+G+LTRIYNIKKACGD KSKP FLS+KSLES IK IVK+FPNID+K
Sbjct: 10 QKIAEKLIILNDRGLGILTRIYNIKKACGDTKSKPGFLSEKSLESSIKFIVKRFPNIDVK 69
Query: 311 SVSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
++ I I+++I+KSLSLYY+TFVDLL FKD V
Sbjct: 70 GLNAIVNIKAEIIKSLSLYYHTFVDLLDFKDNV 102
Score = 285 (105.4 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 65/139 (46%), Positives = 87/139 (62%)
Query: 66 QERFRSITQSYYRSAHALILVYDISC--QPTFDCLTDWLREIEEY--ASFKVLRVLVGGT 121
+E+F+ + Q R + ++ I C + L D L + + +S K + + G
Sbjct: 891 KEQFKRL-QDVDRVLQRMTIIGVIICFRNLVHEALVDVLDKRIPFLLSSVKDFQEHLPGG 949
Query: 122 SGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNE 181
+++ +EMASAAGLLC VDP LAT L S K + DE EH+ ACLLMVFVAV IPKLARNE
Sbjct: 950 DQIRVASEMASAAGLLCKVDPTLATTLKSKKPEFDEGEHLTACLLMVFVAVSIPKLARNE 1009
Query: 182 ACFYLASLEGHSNNIHCMA 200
FY A+++GHSNN HCMA
Sbjct: 1010 NSFYRATIDGHSNNTHCMA 1028
Score = 170 (64.9 bits), Expect = 1.3e-40, Sum P(2) = 1.3e-40
Identities = 30/46 (65%), Positives = 39/46 (84%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPHDSM 714
L +NAA+E+ +NQ+D FPRLGQMI+DYEVP+KKL+EEFIPH +
Sbjct: 152 LGLYNAAYELQNNQADTGFPRLGQMILDYEVPLKKLAEEFIPHQRL 197
Score = 54 (24.1 bits), Expect = 4.5e-99, Sum P(3) = 4.5e-99
Identities = 10/12 (83%), Positives = 11/12 (91%)
Query: 373 PGAESYRKTREE 384
PG ESYRKTRE+
Sbjct: 660 PGDESYRKTRED 671
>ZFIN|ZDB-GENE-030131-4426 [details] [associations]
symbol:nckap1 "NCK-associated protein 1"
species:7955 "Danio rerio" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0042995
"cell projection" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0031258 "lamellipodium membrane" evidence=IEA]
ZFIN:ZDB-GENE-030131-4426 GO:GO:0016021 GO:GO:0031258
eggNOG:NOG287735 GeneTree:ENSGT00390000016619 HOGENOM:HOG000231880
OMA:SCFPYAL InterPro:IPR019137 Pfam:PF09735 EMBL:CR513785
EMBL:BX548025 IPI:IPI00803680 IPI:IPI00931918 UniGene:Dr.79564
STRING:B0S6R1 PRIDE:B0S6R1 Ensembl:ENSDART00000132696
Ensembl:ENSDART00000145271 HOVERGEN:HBG006344 OrthoDB:EOG4M0F0V
Bgee:B0S6R1 Uniprot:B0S6R1
Length = 1128
Score = 508 (183.9 bits), Expect = 1.7e-74, Sum P(2) = 1.7e-74
Identities = 108/210 (51%), Positives = 139/210 (66%)
Query: 407 PGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRA 466
PG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF+++
Sbjct: 660 PGVESMRKNRLLVTNLDKLHTALSELCFSINYVPNMMVWEHTFTPREYLTSHLEIRFTKS 719
Query: 467 LVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSH 526
+VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DSH
Sbjct: 720 IVGMTMYNQTTQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSH 779
Query: 527 GEKTVAALYIQWYSEVLLRRVSETQVKSLNLLN-FLRVYTVENYVHIDMTRVFNNALLQQ 585
GE T+ +LY WY E LLR+VS + + F+ + T EN ++T FN
Sbjct: 780 GEPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPT-EN----ELT--FNAEEYSD 832
Query: 586 TQRMDSHGEKTVAALYIQWYSEVLLRRVSA 615
M S E + +++ SE L+ +S+
Sbjct: 833 ISEMRSLSE-LLGPYGMKFLSESLMWHISS 861
Score = 340 (124.7 bits), Expect = 8.6e-54, Sum P(2) = 8.6e-54
Identities = 81/192 (42%), Positives = 118/192 (61%)
Query: 543 LLRRVSETQVKSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV 597
+ + ++ K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+
Sbjct: 725 MYNQTTQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTI 784
Query: 598 AALYIQWYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIG 657
+LY WY E LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+G
Sbjct: 785 TSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLG 844
Query: 658 PYGMKLLNELSLKAFNAAHEMVHNQSDV--NFPRLGQMIMDYEVP--MKKLSEEFIPHDS 713
PYGMK L+E SL ++ + ++ + V N L QM ++ P M L + DS
Sbjct: 845 PYGMKFLSE-SLM-WHISSQVAELKKLVVDNVEVLTQMRTSFDKPDHMAALFKRLTSVDS 902
Query: 714 MRPMRWFIIKVM 725
+ R II V+
Sbjct: 903 VLK-RMTIIGVI 913
Score = 303 (111.7 bits), Expect = 1.7e-74, Sum P(2) = 1.7e-74
Identities = 57/97 (58%), Positives = 82/97 (84%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRG+GMLTRIYNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGIGMLTRIYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 208 (78.3 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 42/77 (54%), Positives = 56/77 (72%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSMPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 156 (60.0 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 51/140 (36%), Positives = 73/140 (52%)
Query: 579 NNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPF 638
NN L Q Q+ S K +A LY + +V+ + ++C LN + + + F
Sbjct: 72 NNQQLAQLQKEKSEILKNLA-LYYFTFVDVMEFK---DHVCELLNTIDACQVFFDITVNF 127
Query: 639 NAEEFSDVNELRALADLIGPYG--MKLLNELS-LKA----FNAAHEMVHNQSDVNFPRLG 691
+ + N L DL+ Y M LL+ + KA +N AHEM H SD +PRLG
Sbjct: 128 DLTK----NYL----DLVVTYTTLMLLLSRIEERKAIIGLYNYAHEMTHGSSDREYPRLG 179
Query: 692 QMIMDYEVPMKKLSEEFIPH 711
QMI+DYE P+KK+ EEF+PH
Sbjct: 180 QMIVDYENPLKKMMEEFVPH 199
>MGI|MGI:1355333 [details] [associations]
symbol:Nckap1 "NCK-associated protein 1" species:10090 "Mus
musculus" [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0001756 "somitogenesis" evidence=IMP] [GO:0001843
"neural tube closure" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007354 "zygotic determination
of anterior/posterior axis, embryo" evidence=IMP] [GO:0007492
"endoderm development" evidence=IMP] [GO:0008078 "mesodermal cell
migration" evidence=IMP] [GO:0010172 "embryonic body morphogenesis"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030027 "lamellipodium"
evidence=IDA] [GO:0030032 "lamellipodium assembly"
evidence=IMP;IDA] [GO:0030903 "notochord development" evidence=IMP]
[GO:0030950 "establishment or maintenance of actin cytoskeleton
polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0035050 "embryonic heart tube
development" evidence=IMP] [GO:0042074 "cell migration involved in
gastrulation" evidence=IMP] [GO:0042995 "cell projection"
evidence=IEA] [GO:0045175 "basal protein localization"
evidence=IDA] [GO:0045176 "apical protein localization"
evidence=IDA] [GO:0048339 "paraxial mesoderm development"
evidence=IMP] [GO:0048340 "paraxial mesoderm morphogenesis"
evidence=IMP] [GO:0048570 "notochord morphogenesis" evidence=IMP]
[GO:0048617 "embryonic foregut morphogenesis" evidence=IMP]
[GO:0050821 "protein stabilization" evidence=IMP] MGI:MGI:1355333
GO:GO:0016021 GO:GO:0005737 GO:GO:0050821 GO:GO:0001701
GO:GO:0032880 GO:GO:0030027 GO:GO:0001756 GO:GO:0001843
GO:GO:0030032 GO:GO:0007492 GO:GO:0031258 GO:GO:0010172
GO:GO:0008078 GO:GO:0030950 GO:GO:0048617 GO:GO:0045176
GO:GO:0048570 GO:GO:0035050 GO:GO:0007354 GO:GO:0045175
eggNOG:NOG287735 GeneTree:ENSGT00390000016619 HOGENOM:HOG000231880
KO:K05750 InterPro:IPR019137 Pfam:PF09735 HOVERGEN:HBG006344
OrthoDB:EOG4M0F0V CTD:10787 ChiTaRS:NCKAP1 GO:GO:0048340
EMBL:AJ534525 EMBL:AK122318 EMBL:X61453 EMBL:BC003962 EMBL:AK143049
IPI:IPI00319320 IPI:IPI00656204 PIR:S16866 RefSeq:NP_058661.1
UniGene:Mm.25203 ProteinModelPortal:P28660 IntAct:P28660
STRING:P28660 PhosphoSite:P28660 PaxDb:P28660 PRIDE:P28660
DNASU:50884 Ensembl:ENSMUST00000028386 GeneID:50884 KEGG:mmu:50884
NextBio:307869 Bgee:P28660 CleanEx:MM_NCKAP1 Genevestigator:P28660
GermOnline:ENSMUSG00000027002 Uniprot:P28660
Length = 1128
Score = 507 (183.5 bits), Expect = 3.3e-74, Sum P(2) = 3.3e-74
Identities = 108/210 (51%), Positives = 139/210 (66%)
Query: 407 PGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRA 466
PG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF+++
Sbjct: 660 PGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMAVWEHTFTPREYLTSHLEIRFTKS 719
Query: 467 LVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSH 526
+VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DSH
Sbjct: 720 IVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSH 779
Query: 527 GEKTVAALYIQWYSEVLLRRVSETQVKSLNLLN-FLRVYTVENYVHIDMTRVFNNALLQQ 585
GE T+ +LY WY E LLR+VS + + F+ + T EN ++T FN
Sbjct: 780 GEPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPT-EN----ELT--FNAEEYSD 832
Query: 586 TQRMDSHGEKTVAALYIQWYSEVLLRRVSA 615
M S E + +++ SE L+ +S+
Sbjct: 833 ISEMRSLSE-LLGPYGMKFLSESLMWHISS 861
Score = 339 (124.4 bits), Expect = 1.4e-53, Sum P(2) = 1.4e-53
Identities = 65/129 (50%), Positives = 91/129 (70%)
Query: 543 LLRRVSETQVKSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV 597
+ + ++ K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+
Sbjct: 725 MYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTI 784
Query: 598 AALYIQWYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIG 657
+LY WY E LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+G
Sbjct: 785 TSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLG 844
Query: 658 PYGMKLLNE 666
PYGMK L+E
Sbjct: 845 PYGMKFLSE 853
Score = 302 (111.4 bits), Expect = 3.3e-74, Sum P(2) = 3.3e-74
Identities = 57/97 (58%), Positives = 82/97 (84%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 209 (78.6 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 42/77 (54%), Positives = 56/77 (72%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 152 (58.6 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPH 199
>UNIPROTKB|F1RYL3 [details] [associations]
symbol:NCKAP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0048617 "embryonic foregut morphogenesis" evidence=IEA]
[GO:0048570 "notochord morphogenesis" evidence=IEA] [GO:0048340
"paraxial mesoderm morphogenesis" evidence=IEA] [GO:0045176 "apical
protein localization" evidence=IEA] [GO:0045175 "basal protein
localization" evidence=IEA] [GO:0035050 "embryonic heart tube
development" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0030950 "establishment or
maintenance of actin cytoskeleton polarity" evidence=IEA]
[GO:0030032 "lamellipodium assembly" evidence=IEA] [GO:0030027
"lamellipodium" evidence=IEA] [GO:0010172 "embryonic body
morphogenesis" evidence=IEA] [GO:0008078 "mesodermal cell
migration" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0007354 "zygotic determination of
anterior/posterior axis, embryo" evidence=IEA] [GO:0001843 "neural
tube closure" evidence=IEA] [GO:0001756 "somitogenesis"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] GO:GO:0050821 GO:GO:0001701 GO:GO:0032880
GO:GO:0030027 GO:GO:0001756 GO:GO:0001843 GO:GO:0030032
GO:GO:0007492 GO:GO:0010172 GO:GO:0008078 GO:GO:0030950
GO:GO:0048617 GO:GO:0045176 GO:GO:0048570 GO:GO:0035050
GO:GO:0007354 GO:GO:0045175 GeneTree:ENSGT00390000016619
OMA:SCFPYAL InterPro:IPR019137 Pfam:PF09735 GO:GO:0048340
EMBL:CU571108 Ensembl:ENSSSCT00000017442 Uniprot:F1RYL3
Length = 1125
Score = 506 (183.2 bits), Expect = 5.6e-74, Sum P(2) = 5.6e-74
Identities = 108/210 (51%), Positives = 139/210 (66%)
Query: 407 PGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRA 466
PG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF+++
Sbjct: 660 PGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTKS 719
Query: 467 LVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSH 526
+VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DSH
Sbjct: 720 IVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSH 779
Query: 527 GEKTVAALYIQWYSEVLLRRVSETQVKSLNLLN-FLRVYTVENYVHIDMTRVFNNALLQQ 585
GE T+ +LY WY E LLR+VS + + F+ + T EN ++T FN
Sbjct: 780 GEPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPT-EN----ELT--FNAEEYSD 832
Query: 586 TQRMDSHGEKTVAALYIQWYSEVLLRRVSA 615
M S E + +++ SE L+ +S+
Sbjct: 833 ISEMRSLSE-LLGPYGMKFLSESLMWHISS 861
Score = 339 (124.4 bits), Expect = 1.4e-53, Sum P(2) = 1.4e-53
Identities = 65/129 (50%), Positives = 91/129 (70%)
Query: 543 LLRRVSETQVKSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV 597
+ + ++ K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+
Sbjct: 725 MYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTI 784
Query: 598 AALYIQWYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIG 657
+LY WY E LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+G
Sbjct: 785 TSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLG 844
Query: 658 PYGMKLLNE 666
PYGMK L+E
Sbjct: 845 PYGMKFLSE 853
Score = 302 (111.4 bits), Expect = 5.6e-74, Sum P(2) = 5.6e-74
Identities = 57/97 (58%), Positives = 82/97 (84%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 155 (59.6 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 52/140 (37%), Positives = 73/140 (52%)
Query: 579 NNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPF 638
NN L Q Q+ S K +A LY + +V+ + ++C LN + + + F
Sbjct: 72 NNQQLAQLQKEKSEILKNLA-LYYFTFVDVMEFK---DHVCELLNTIDVCQVFFDITVNF 127
Query: 639 NAEEFSDVNELRALADLIGPYG--MKLLNELS-LKA----FNAAHEMVHNQSDVNFPRLG 691
+ + N L DLI Y M LL+ + KA +N AHEM H SD +PRLG
Sbjct: 128 DLTK----NYL----DLIITYTTLMILLSRIEERKAIIGLYNYAHEMTHGASDREYPRLG 179
Query: 692 QMIMDYEVPMKKLSEEFIPH 711
QMI+DYE P+KK+ EEF+PH
Sbjct: 180 QMIVDYENPLKKMMEEFVPH 199
>UNIPROTKB|Q9Y2A7 [details] [associations]
symbol:NCKAP1 "Nck-associated protein 1" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001756 "somitogenesis" evidence=IEA] [GO:0001843 "neural tube
closure" evidence=IEA] [GO:0007354 "zygotic determination of
anterior/posterior axis, embryo" evidence=IEA] [GO:0007492
"endoderm development" evidence=IEA] [GO:0008078 "mesodermal cell
migration" evidence=IEA] [GO:0010172 "embryonic body morphogenesis"
evidence=IEA] [GO:0030032 "lamellipodium assembly" evidence=IEA]
[GO:0030950 "establishment or maintenance of actin cytoskeleton
polarity" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0035050 "embryonic heart tube
development" evidence=IEA] [GO:0045175 "basal protein localization"
evidence=IEA] [GO:0045176 "apical protein localization"
evidence=IEA] [GO:0048340 "paraxial mesoderm morphogenesis"
evidence=IEA] [GO:0048570 "notochord morphogenesis" evidence=IEA]
[GO:0048617 "embryonic foregut morphogenesis" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0031258
"lamellipodium membrane" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=TAS] [GO:0007417 "central nervous system
development" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] GO:GO:0016021 GO:GO:0006915 GO:GO:0050821
GO:GO:0001701 GO:GO:0007417 GO:GO:0032880 GO:GO:0001756 PDB:3P8C
PDBsum:3P8C GO:GO:0001843 GO:GO:0030032 GO:GO:0007492 GO:GO:0031258
GO:GO:0010172 GO:GO:0008078 GO:GO:0030950 GO:GO:0048617
GO:GO:0045176 GO:GO:0048570 GO:GO:0035050 GO:GO:0007354
GO:GO:0045175 EMBL:AC064871 eggNOG:NOG287735 HOGENOM:HOG000231880
KO:K05750 OMA:SCFPYAL InterPro:IPR019137 Pfam:PF09735
HOVERGEN:HBG006344 OrthoDB:EOG4M0F0V EMBL:AB014509 EMBL:AB011159
EMBL:AK292914 EMBL:BT007033 EMBL:AC108514 EMBL:BC015025
IPI:IPI00031982 IPI:IPI00409684 RefSeq:NP_038464.1
RefSeq:NP_995314.1 UniGene:Hs.603732 ProteinModelPortal:Q9Y2A7
DIP:DIP-31119N IntAct:Q9Y2A7 MINT:MINT-244824 STRING:Q9Y2A7
PhosphoSite:Q9Y2A7 DMDM:12643947 PaxDb:Q9Y2A7 PRIDE:Q9Y2A7
DNASU:10787 Ensembl:ENST00000360982 Ensembl:ENST00000361354
GeneID:10787 KEGG:hsa:10787 UCSC:uc002upb.3 UCSC:uc002upc.3
CTD:10787 GeneCards:GC02M183789 HGNC:HGNC:7666 HPA:HPA020449
MIM:604891 neXtProt:NX_Q9Y2A7 PharmGKB:PA31468 ChiTaRS:NCKAP1
EvolutionaryTrace:Q9Y2A7 GenomeRNAi:10787 NextBio:40972 Bgee:Q9Y2A7
CleanEx:HS_NCKAP1 Genevestigator:Q9Y2A7 GermOnline:ENSG00000061676
GO:GO:0048340 Uniprot:Q9Y2A7
Length = 1128
Score = 506 (183.2 bits), Expect = 5.7e-74, Sum P(2) = 5.7e-74
Identities = 108/210 (51%), Positives = 139/210 (66%)
Query: 407 PGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRA 466
PG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF+++
Sbjct: 660 PGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTKS 719
Query: 467 LVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSH 526
+VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DSH
Sbjct: 720 IVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSH 779
Query: 527 GEKTVAALYIQWYSEVLLRRVSETQVKSLNLLN-FLRVYTVENYVHIDMTRVFNNALLQQ 585
GE T+ +LY WY E LLR+VS + + F+ + T EN ++T FN
Sbjct: 780 GEPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPT-EN----ELT--FNAEEYSD 832
Query: 586 TQRMDSHGEKTVAALYIQWYSEVLLRRVSA 615
M S E + +++ SE L+ +S+
Sbjct: 833 ISEMRSLSE-LLGPYGMKFLSESLMWHISS 861
Score = 339 (124.4 bits), Expect = 1.4e-53, Sum P(2) = 1.4e-53
Identities = 65/129 (50%), Positives = 91/129 (70%)
Query: 543 LLRRVSETQVKSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV 597
+ + ++ K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+
Sbjct: 725 MYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTI 784
Query: 598 AALYIQWYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIG 657
+LY WY E LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+G
Sbjct: 785 TSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLG 844
Query: 658 PYGMKLLNE 666
PYGMK L+E
Sbjct: 845 PYGMKFLSE 853
Score = 302 (111.4 bits), Expect = 5.7e-74, Sum P(2) = 5.7e-74
Identities = 57/97 (58%), Positives = 82/97 (84%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 209 (78.6 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 42/77 (54%), Positives = 56/77 (72%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 155 (59.6 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 52/140 (37%), Positives = 73/140 (52%)
Query: 579 NNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPF 638
NN L Q Q+ S K +A LY + +V+ + ++C LN + + + F
Sbjct: 72 NNQQLAQLQKEKSEILKNLA-LYYFTFVDVMEFK---DHVCELLNTIDVCQVFFDITVNF 127
Query: 639 NAEEFSDVNELRALADLIGPYG--MKLLNELS-LKA----FNAAHEMVHNQSDVNFPRLG 691
+ + N L DLI Y M LL+ + KA +N AHEM H SD +PRLG
Sbjct: 128 DLTK----NYL----DLIITYTTLMILLSRIEERKAIIGLYNYAHEMTHGASDREYPRLG 179
Query: 692 QMIMDYEVPMKKLSEEFIPH 711
QMI+DYE P+KK+ EEF+PH
Sbjct: 180 QMIVDYENPLKKMMEEFVPH 199
>RGD|61939 [details] [associations]
symbol:Nckap1 "NCK-associated protein 1" species:10116 "Rattus
norvegicus" [GO:0001701 "in utero embryonic development"
evidence=ISO] [GO:0001756 "somitogenesis" evidence=ISO] [GO:0001843
"neural tube closure" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007354 "zygotic determination of
anterior/posterior axis, embryo" evidence=ISO] [GO:0007492 "endoderm
development" evidence=ISO] [GO:0008078 "mesodermal cell migration"
evidence=ISO] [GO:0010172 "embryonic body morphogenesis"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=ISO] [GO:0030032 "lamellipodium
assembly" evidence=ISO] [GO:0030903 "notochord development"
evidence=ISO] [GO:0030950 "establishment or maintenance of actin
cytoskeleton polarity" evidence=ISO] [GO:0031258 "lamellipodium
membrane" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=ISO] [GO:0035050 "embryonic heart tube
development" evidence=ISO] [GO:0042074 "cell migration involved in
gastrulation" evidence=ISO] [GO:0045175 "basal protein localization"
evidence=ISO] [GO:0045176 "apical protein localization"
evidence=ISO] [GO:0048339 "paraxial mesoderm development"
evidence=ISO] [GO:0048340 "paraxial mesoderm morphogenesis"
evidence=ISO] [GO:0048570 "notochord morphogenesis" evidence=ISO]
[GO:0048617 "embryonic foregut morphogenesis" evidence=ISO]
[GO:0050821 "protein stabilization" evidence=ISO] RGD:61939
GO:GO:0016021 GO:GO:0031258 eggNOG:NOG287735 HOGENOM:HOG000231880
KO:K05750 InterPro:IPR019137 Pfam:PF09735 HOVERGEN:HBG006344
CTD:10787 EMBL:D84346 EMBL:X80029 IPI:IPI00876636 PIR:S57833
RefSeq:NP_113806.1 UniGene:Rn.2611 IntAct:P55161 STRING:P55161
PhosphoSite:P55161 PRIDE:P55161 GeneID:58823 KEGG:rno:58823
UCSC:RGD:61939 InParanoid:P55161 NextBio:611376 ArrayExpress:P55161
Genevestigator:P55161 GermOnline:ENSRNOG00000007518 Uniprot:P55161
Length = 1128
Score = 502 (181.8 bits), Expect = 2.8e-73, Sum P(2) = 2.8e-73
Identities = 107/210 (50%), Positives = 138/210 (65%)
Query: 407 PGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRA 466
PG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF+++
Sbjct: 660 PGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMAVWEHTFTPREYLTSHLEIRFTKS 719
Query: 467 LVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSH 526
+VGM M+N T EIAKPSELL SVR YM VLQ++ENYV ID+TRVFNN LLQQTQ +DSH
Sbjct: 720 IVGMTMYNQATQEIAKPSELLTSVREYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSH 779
Query: 527 GEKTVAALYIQWYSEVLLRRVSETQVKSLNLLN-FLRVYTVENYVHIDMTRVFNNALLQQ 585
GE T+ +LY WY E LLR+VS + + F+ + T EN ++T FN
Sbjct: 780 GEPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPT-EN----ELT--FNAEEYSD 832
Query: 586 TQRMDSHGEKTVAALYIQWYSEVLLRRVSA 615
M S E + +++ SE L+ +S+
Sbjct: 833 ISEMRSLSE-LLGPYGMKFLSESLMWHISS 861
Score = 337 (123.7 bits), Expect = 2.4e-53, Sum P(2) = 2.4e-53
Identities = 65/129 (50%), Positives = 91/129 (70%)
Query: 543 LLRRVSETQVKSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV 597
+ + ++ K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+
Sbjct: 725 MYNQATQEIAKPSELLTSVREYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTI 784
Query: 598 AALYIQWYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIG 657
+LY WY E LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+G
Sbjct: 785 TSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLG 844
Query: 658 PYGMKLLNE 666
PYGMK L+E
Sbjct: 845 PYGMKFLSE 853
Score = 302 (111.4 bits), Expect = 2.8e-73, Sum P(2) = 2.8e-73
Identities = 57/97 (58%), Positives = 82/97 (84%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YNIKKACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 209 (78.6 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 42/77 (54%), Positives = 56/77 (72%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 152 (58.6 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM H SD +PRLGQMI+DYE P+KK+ EEF+PH
Sbjct: 160 YNYAHEMTHGASDREYPRLGQMIVDYEHPLKKMMEEFVPH 199
>UNIPROTKB|E1C6G9 [details] [associations]
symbol:NCKAP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0007354 "zygotic
determination of anterior/posterior axis, embryo" evidence=IEA]
[GO:0007492 "endoderm development" evidence=IEA] [GO:0008078
"mesodermal cell migration" evidence=IEA] [GO:0010172 "embryonic
body morphogenesis" evidence=IEA] [GO:0030027 "lamellipodium"
evidence=IEA] [GO:0030032 "lamellipodium assembly" evidence=IEA]
[GO:0030950 "establishment or maintenance of actin cytoskeleton
polarity" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0035050 "embryonic heart tube
development" evidence=IEA] [GO:0045175 "basal protein localization"
evidence=IEA] [GO:0045176 "apical protein localization"
evidence=IEA] [GO:0048340 "paraxial mesoderm morphogenesis"
evidence=IEA] [GO:0048570 "notochord morphogenesis" evidence=IEA]
[GO:0048617 "embryonic foregut morphogenesis" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] GO:GO:0050821
GO:GO:0032880 GO:GO:0030027 GO:GO:0030032 GO:GO:0030950
GO:GO:0045176 GO:GO:0045175 GeneTree:ENSGT00390000016619
OMA:SCFPYAL InterPro:IPR019137 Pfam:PF09735 EMBL:AADN02034531
EMBL:AADN02034532 IPI:IPI00599781 Ensembl:ENSGALT00000004344
NextBio:20826389 Uniprot:E1C6G9
Length = 1128
Score = 505 (182.8 bits), Expect = 9.5e-73, Sum P(2) = 9.5e-73
Identities = 94/146 (64%), Positives = 113/146 (77%)
Query: 407 PGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRA 466
PG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF+++
Sbjct: 660 PGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTKS 719
Query: 467 LVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSH 526
+VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DSH
Sbjct: 720 IVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSH 779
Query: 527 GEKTVAALYIQWYSEVLLRRVSETQV 552
GE T+ +LY WY E LLR+VS +
Sbjct: 780 GEPTITSLYTNWYLETLLRQVSNGHI 805
Score = 342 (125.4 bits), Expect = 7.4e-53, Sum P(2) = 7.4e-53
Identities = 66/129 (51%), Positives = 91/129 (70%)
Query: 543 LLRRVSETQVKSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV 597
+ + ++ K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+
Sbjct: 725 MYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTI 784
Query: 598 AALYIQWYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIG 657
+LY WY E LLR+VS G+I + +AFV+L E + FNAEE+SD++E+RAL++L+G
Sbjct: 785 TSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRALSELLG 844
Query: 658 PYGMKLLNE 666
PYGMK L+E
Sbjct: 845 PYGMKFLSE 853
Score = 292 (107.8 bits), Expect = 9.5e-73, Sum P(2) = 9.5e-73
Identities = 55/97 (56%), Positives = 81/97 (83%)
Query: 251 EKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIK 310
+KLAEKLTI++DRGVGMLTR+YN +KACGD K+KPS+L DK+LES +K IV+KFP ++ +
Sbjct: 11 QKLAEKLTILNDRGVGMLTRLYNKRKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
Query: 311 S----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCV 343
+ ++ + + +S+I+K+L+LYY+TFVD++ FKD V
Sbjct: 71 NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHV 107
Score = 209 (78.6 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 42/77 (54%), Positives = 56/77 (72%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 958 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 1017
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 1018 YSPAIEGHCNNIHCLAK 1034
Score = 155 (59.6 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 52/140 (37%), Positives = 73/140 (52%)
Query: 579 NNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPF 638
NN L Q Q+ S K +A LY + +V+ + ++C LN + + + F
Sbjct: 72 NNQQLAQLQKEKSEILKNLA-LYYFTFVDVMEFK---DHVCELLNTIDVCQVFFDITVNF 127
Query: 639 NAEEFSDVNELRALADLIGPYG--MKLLNELS-LKA----FNAAHEMVHNQSDVNFPRLG 691
+ + N L DLI Y M LL+ + KA +N AHEM H SD +PRLG
Sbjct: 128 DLTK----NYL----DLIITYTTLMILLSRIEERKAIIGLYNYAHEMTHGASDREYPRLG 179
Query: 692 QMIMDYEVPMKKLSEEFIPH 711
QMI+DYE P+KK+ EEF+PH
Sbjct: 180 QMIVDYENPLKKMMEEFVPH 199
>UNIPROTKB|F1MPZ9 [details] [associations]
symbol:NCKAP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0048617 "embryonic foregut morphogenesis" evidence=IEA]
[GO:0048570 "notochord morphogenesis" evidence=IEA] [GO:0048340
"paraxial mesoderm morphogenesis" evidence=IEA] [GO:0045176 "apical
protein localization" evidence=IEA] [GO:0045175 "basal protein
localization" evidence=IEA] [GO:0035050 "embryonic heart tube
development" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0030950 "establishment or
maintenance of actin cytoskeleton polarity" evidence=IEA]
[GO:0030032 "lamellipodium assembly" evidence=IEA] [GO:0030027
"lamellipodium" evidence=IEA] [GO:0010172 "embryonic body
morphogenesis" evidence=IEA] [GO:0008078 "mesodermal cell
migration" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0007354 "zygotic determination of
anterior/posterior axis, embryo" evidence=IEA] [GO:0001843 "neural
tube closure" evidence=IEA] [GO:0001756 "somitogenesis"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] GO:GO:0050821 GO:GO:0001701 GO:GO:0032880
GO:GO:0030027 GO:GO:0001756 GO:GO:0001843 GO:GO:0030032
GO:GO:0007492 GO:GO:0010172 GO:GO:0008078 GO:GO:0030950
GO:GO:0048617 GO:GO:0045176 GO:GO:0048570 GO:GO:0035050
GO:GO:0007354 GO:GO:0045175 GeneTree:ENSGT00390000016619
OMA:SCFPYAL InterPro:IPR019137 Pfam:PF09735 GO:GO:0048340
EMBL:DAAA02004049 EMBL:DAAA02004050 EMBL:DAAA02004051
EMBL:DAAA02004052 IPI:IPI00703279 IntAct:F1MPZ9
Ensembl:ENSBTAT00000047777 Uniprot:F1MPZ9
Length = 1093
Score = 506 (183.2 bits), Expect = 8.0e-62, Sum P(2) = 8.0e-62
Identities = 108/210 (51%), Positives = 139/210 (66%)
Query: 407 PGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRA 466
PG ES RK R +T +DKLH AL+ELCF+INY N+ VW+ TF PREYL HLE RF+++
Sbjct: 625 PGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTKS 684
Query: 467 LVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSH 526
+VGM M+N T EIAKPSELL SVRAYM VLQ++ENYV ID+TRVFNN LLQQTQ +DSH
Sbjct: 685 IVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSH 744
Query: 527 GEKTVAALYIQWYSEVLLRRVSETQVKSLNLLN-FLRVYTVENYVHIDMTRVFNNALLQQ 585
GE T+ +LY WY E LLR+VS + + F+ + T EN ++T FN
Sbjct: 745 GEPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPT-EN----ELT--FNAEEYSD 797
Query: 586 TQRMDSHGEKTVAALYIQWYSEVLLRRVSA 615
M S E + +++ SE L+ +S+
Sbjct: 798 ISEMRSLSE-LLGPYGMKFLSESLMWHISS 826
Score = 339 (124.4 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 65/129 (50%), Positives = 91/129 (70%)
Query: 543 LLRRVSETQVKSLNLLNFLRVY-----TVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV 597
+ + ++ K LL +R Y ++ENYV ID+TRVFNN LLQQTQ +DSHGE T+
Sbjct: 690 MYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTI 749
Query: 598 AALYIQWYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIG 657
+LY WY E LLR+VS G+I + +AFV+L E + FNAEE+SD++E+R+L++L+G
Sbjct: 750 TSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLG 809
Query: 658 PYGMKLLNE 666
PYGMK L+E
Sbjct: 810 PYGMKFLSE 818
Score = 209 (78.6 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 42/77 (54%), Positives = 56/77 (72%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTD--LDEDEHVLACLLMVFVAVCIPKLARNEACF 184
V E++SAAGL C +DPAL AL+S K++ E+E+ +ACLLMVFVAV +P LA N
Sbjct: 923 VYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQ 982
Query: 185 YLASLEGHSNNIHCMAR 201
Y ++EGH NNIHC+A+
Sbjct: 983 YSPAIEGHCNNIHCLAK 999
Score = 186 (70.5 bits), Expect = 8.0e-62, Sum P(2) = 8.0e-62
Identities = 35/71 (49%), Positives = 56/71 (78%)
Query: 277 ACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS----VSGISQIRSDIVKSLSLYYYT 332
ACGD K+KPS+L DK+LES +K IV+KFP ++ ++ ++ + + +S+I+K+L+LYY+T
Sbjct: 1 ACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFT 60
Query: 333 FVDLLHFKDCV 343
FVD++ FKD V
Sbjct: 61 FVDVMEFKDHV 71
Score = 155 (59.6 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 52/140 (37%), Positives = 73/140 (52%)
Query: 579 NNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPF 638
NN L Q Q+ S K +A LY + +V+ + ++C LN + + + F
Sbjct: 36 NNQQLAQLQKEKSEILKNLA-LYYFTFVDVMEFK---DHVCELLNTIDVCQVFFDITVNF 91
Query: 639 NAEEFSDVNELRALADLIGPYG--MKLLNELS-LKA----FNAAHEMVHNQSDVNFPRLG 691
+ + N L DLI Y M LL+ + KA +N AHEM H SD +PRLG
Sbjct: 92 DLTK----NYL----DLIITYTTLMILLSRIEERKAIIGLYNYAHEMTHGASDREYPRLG 143
Query: 692 QMIMDYEVPMKKLSEEFIPH 711
QMI+DYE P+KK+ EEF+PH
Sbjct: 144 QMIVDYENPLKKMMEEFVPH 163
>FB|FBgn0031882 [details] [associations]
symbol:Rab30 "Rab30" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AE014134 GO:GO:0015031
GO:GO:0003924 eggNOG:COG1100 GeneTree:ENSGT00700000104044 CTD:27314
KO:K07917 OMA:DYKFLFK HSSP:P32939 EMBL:AY071080
RefSeq:NP_001245926.1 RefSeq:NP_609094.1 RefSeq:NP_723241.1
RefSeq:NP_723242.1 UniGene:Dm.6130 SMR:Q9VM50
EnsemblMetazoa:FBtr0079426 EnsemblMetazoa:FBtr0079427
EnsemblMetazoa:FBtr0079428 EnsemblMetazoa:FBtr0309323 GeneID:33988
KEGG:dme:Dmel_CG9100 UCSC:CG9100-RA FlyBase:FBgn0031882
InParanoid:Q9VM50 OrthoDB:EOG49GHZN GenomeRNAi:33988 NextBio:786293
Uniprot:Q9VM50
Length = 223
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 107/119 (89%), Positives = 115/119 (96%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYKFLFK+VLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVE+ E+IKLQI
Sbjct: 1 MEDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL DWLREI+EYA+ KVL++LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVG 119
Score = 207 (77.9 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 43/96 (44%), Positives = 66/96 (68%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDREDREIPTEVGEDFA 220
L++V+ C P C +L ++ ++N+ + + NK DR+DREIPT++GE+FA
Sbjct: 83 LILVYDISCQPTFD----CLPDWLREIQEYANSKVLKILVGNKTDRDDREIPTQIGEEFA 138
Query: 221 KRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
K+HDMY+LETSAK ++NVE+LF +IAAEL+ + K
Sbjct: 139 KQHDMYFLETSAKEAENVERLFYEIAAELIGQARSK 174
>UNIPROTKB|E1B876 [details] [associations]
symbol:NCKAP1L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090023 "positive regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0070358 "actin polymerization-dependent cell
motility" evidence=IEA] [GO:0060100 "positive regulation of
phagocytosis, engulfment" evidence=IEA] [GO:0050853 "B cell
receptor signaling pathway" evidence=IEA] [GO:0048821 "erythrocyte
development" evidence=IEA] [GO:0045648 "positive regulation of
erythrocyte differentiation" evidence=IEA] [GO:0045588 "positive
regulation of gamma-delta T cell differentiation" evidence=IEA]
[GO:0045579 "positive regulation of B cell differentiation"
evidence=IEA] [GO:0043378 "positive regulation of CD8-positive,
alpha-beta T cell differentiation" evidence=IEA] [GO:0043372
"positive regulation of CD4-positive, alpha-beta T cell
differentiation" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043029 "T cell homeostasis"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0042102 "positive regulation of T cell proliferation"
evidence=IEA] [GO:0035509 "negative regulation of
myosin-light-chain-phosphatase activity" evidence=IEA] [GO:0033630
"positive regulation of cell adhesion mediated by integrin"
evidence=IEA] [GO:0032715 "negative regulation of interleukin-6
production" evidence=IEA] [GO:0032700 "negative regulation of
interleukin-17 production" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0031209 "SCAR complex"
evidence=IEA] [GO:0030890 "positive regulation of B cell
proliferation" evidence=IEA] [GO:0030866 "cortical actin
cytoskeleton organization" evidence=IEA] [GO:0030838 "positive
regulation of actin filament polymerization" evidence=IEA]
[GO:0030675 "Rac GTPase activator activity" evidence=IEA]
[GO:0030593 "neutrophil chemotaxis" evidence=IEA] [GO:0030295
"protein kinase activator activity" evidence=IEA] [GO:0030011
"maintenance of cell polarity" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0002262 "myeloid cell homeostasis" evidence=IEA] [GO:0001782 "B
cell homeostasis" evidence=IEA] GO:GO:0005829 GO:GO:0043066
GO:GO:0006461 GO:GO:0042493 GO:GO:0030866 GO:GO:0030295
GO:GO:0030675 GO:GO:0032715 GO:GO:0030890 GO:GO:0045648
GO:GO:0033630 GO:GO:0042102 GO:GO:0048821 GO:GO:0043029
GO:GO:0030011 GO:GO:0001782 GO:GO:0002262 GO:GO:0045579
GO:GO:0050853 GO:GO:0090023 GO:GO:0030593 GO:GO:0060100
GO:GO:0043372 GeneTree:ENSGT00390000016619 KO:K05750
InterPro:IPR019137 Pfam:PF09735 GO:GO:0045588 GO:GO:0032700
GO:GO:0070358 CTD:3071 OMA:AFMALSF GO:GO:0035509 GO:GO:0043378
EMBL:DAAA02012827 IPI:IPI00838668 RefSeq:NP_001137348.1
UniGene:Bt.30694 PRIDE:E1B876 Ensembl:ENSBTAT00000047448
GeneID:513641 KEGG:bta:513641 NextBio:20870960 Uniprot:E1B876
Length = 1134
Score = 385 (140.6 bits), Expect = 1.0e-55, Sum P(3) = 1.0e-55
Identities = 72/142 (50%), Positives = 101/142 (71%)
Query: 407 PGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRA 466
PGAES+RK R +T MDKLH+ LTEL +N+ + V++ T P EYL HLE+RF+RA
Sbjct: 661 PGAESHRKNRSVVTNMDKLHLNLTELALTMNHVQSFSVFEHTIFPSEYLSSHLEARFNRA 720
Query: 467 LVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSH 526
+V + +N T EIA+PSELLA V+AY++ +Q++ ++ D++R+ NALLQQTQ +DS
Sbjct: 721 IVWLAGYNATTQEIARPSELLAGVKAYISFIQSLAQFLGADVSRIIRNALLQQTQPLDSS 780
Query: 527 GEKTVAALYIQWYSEVLLRRVS 548
GE+T+ LY WY E LLR+ S
Sbjct: 781 GEQTITTLYTNWYLESLLRQAS 802
Score = 305 (112.4 bits), Expect = 1.5e-46, Sum P(3) = 1.5e-46
Identities = 68/180 (37%), Positives = 108/180 (60%)
Query: 491 RAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV--AALYIQWYSEVL--LRR 546
+ ++N+ + H+ VF + + ++ + SH E A +++ Y+ + R
Sbjct: 678 KLHLNLTELALTMNHVQSFSVFEHTIFP-SEYLSSHLEARFNRAIVWLAGYNATTQEIAR 736
Query: 547 VSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYS 606
SE ++F++ ++ ++ D++R+ NALLQQTQ +DS GE+T+ LY WY
Sbjct: 737 PSELLAGVKAYISFIQ--SLAQFLGADVSRIIRNALLQQTQPLDSSGEQTITTLYTNWYL 794
Query: 607 EVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
E LLR+ S+G I S +AF+SL EG F+AEEFSDV+E+RALA+L+GPYGMK L+E
Sbjct: 795 ESLLRQASSGTIILSPAMQAFISLPREGEQNFSAEEFSDVSEMRALAELLGPYGMKFLSE 854
Score = 275 (101.9 bits), Expect = 1.0e-55, Sum P(3) = 1.0e-55
Identities = 56/114 (49%), Positives = 80/114 (70%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+ES +K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMESSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY-LSGHFDA 351
KFPNID+++ + + + +S+I++ L+ YY +FVD++ F+D VY L DA
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKSEIIRYLTNYYQSFVDVMEFRDHVYELLNTIDA 114
Score = 203 (76.5 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 39/75 (52%), Positives = 56/75 (74%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ KTDL E+E+ +ACLL++F+AV +P LA + A FY
Sbjct: 961 ELASAAGVDCDIDPALVAAIANLKTDLSSPEEEYKVACLLLIFLAVSLPLLAMDAASFYS 1020
Query: 187 ASLEGHSNNIHCMAR 201
+G+SNNIHC+ +
Sbjct: 1021 IEKDGYSNNIHCLTK 1035
Score = 146 (56.5 bits), Expect = 4.3e-30, Sum P(2) = 4.3e-30
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
FN AHEM+H SD +F RLGQM+++Y+ P+KKL+EEF PH
Sbjct: 158 FNCAHEMLHGHSDSSFARLGQMVLEYDHPLKKLTEEFGPH 197
Score = 43 (20.2 bits), Expect = 1.0e-55, Sum P(3) = 1.0e-55
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 373 PGAESYRKTR 382
PGAES+RK R
Sbjct: 661 PGAESHRKNR 670
Score = 38 (18.4 bits), Expect = 5.0e-46, Sum P(3) = 5.0e-46
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 453 EYLHQHLESRFSRALVGMVM 472
E LH H +S F+R L MV+
Sbjct: 163 EMLHGHSDSSFAR-LGQMVL 181
>RGD|1312032 [details] [associations]
symbol:Nckap1l "NCK associated protein 1 like" species:10116
"Rattus norvegicus" [GO:0001782 "B cell homeostasis" evidence=ISO]
[GO:0002262 "myeloid cell homeostasis" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006461 "protein complex assembly"
evidence=ISO] [GO:0030011 "maintenance of cell polarity"
evidence=ISO] [GO:0030295 "protein kinase activator activity"
evidence=ISO] [GO:0030593 "neutrophil chemotaxis" evidence=ISO]
[GO:0030675 "Rac GTPase activator activity" evidence=ISO]
[GO:0030838 "positive regulation of actin filament polymerization"
evidence=ISO] [GO:0030866 "cortical actin cytoskeleton
organization" evidence=ISO] [GO:0030890 "positive regulation of B
cell proliferation" evidence=ISO] [GO:0031209 "SCAR complex"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0032700 "negative regulation of interleukin-17 production"
evidence=ISO] [GO:0032715 "negative regulation of interleukin-6
production" evidence=ISO] [GO:0032855 "positive regulation of Rac
GTPase activity" evidence=ISO] [GO:0033630 "positive regulation of
cell adhesion mediated by integrin" evidence=ISO] [GO:0035509
"negative regulation of myosin-light-chain-phosphatase activity"
evidence=ISO] [GO:0042102 "positive regulation of T cell
proliferation" evidence=ISO] [GO:0042221 "response to chemical
stimulus" evidence=ISO] [GO:0042327 "positive regulation of
phosphorylation" evidence=ISO] [GO:0042493 "response to drug"
evidence=ISO] [GO:0043029 "T cell homeostasis" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] [GO:0043372 "positive regulation of CD4-positive,
alpha-beta T cell differentiation" evidence=ISO] [GO:0043378
"positive regulation of CD8-positive, alpha-beta T cell
differentiation" evidence=ISO] [GO:0045579 "positive regulation of
B cell differentiation" evidence=ISO] [GO:0045588 "positive
regulation of gamma-delta T cell differentiation" evidence=ISO]
[GO:0045621 "positive regulation of lymphocyte differentiation"
evidence=ISO] [GO:0045648 "positive regulation of erythrocyte
differentiation" evidence=ISO] [GO:0045860 "positive regulation of
protein kinase activity" evidence=ISO] [GO:0048821 "erythrocyte
development" evidence=ISO] [GO:0050853 "B cell receptor signaling
pathway" evidence=ISO] [GO:0060100 "positive regulation of
phagocytosis, engulfment" evidence=ISO] [GO:0070358 "actin
polymerization-dependent cell motility" evidence=ISO] [GO:0090023
"positive regulation of neutrophil chemotaxis" evidence=ISO]
RGD:1312032 GO:GO:0005829 GO:GO:0043066 GO:GO:0006461 GO:GO:0042493
GO:GO:0030866 GO:GO:0030295 GO:GO:0030675 GO:GO:0032715
GO:GO:0030890 GO:GO:0045648 GO:GO:0033630 GO:GO:0042102
GO:GO:0048821 GO:GO:0043029 GO:GO:0030011 GO:GO:0001782
GO:GO:0002262 GO:GO:0045579 GO:GO:0050853 GO:GO:0090023
GO:GO:0030593 GO:GO:0060100 GO:GO:0043372 InterPro:IPR019137
Pfam:PF09735 GO:GO:0045588 GO:GO:0032700 GO:GO:0070358 OMA:AFMALSF
OrthoDB:EOG4894KS GO:GO:0035509 GO:GO:0043378 IPI:IPI00361956
Ensembl:ENSRNOT00000055273 UCSC:RGD:1312032 ArrayExpress:D4ACV7
Uniprot:D4ACV7
Length = 1139
Score = 375 (137.1 bits), Expect = 2.8e-55, Sum P(3) = 2.8e-55
Identities = 73/142 (51%), Positives = 98/142 (69%)
Query: 407 PGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRA 466
PGAES+RK R +T MDKLH+ LTEL A+N+ + V++ T P EYL HLESR +RA
Sbjct: 666 PGAESHRKNRSLVTNMDKLHLNLTELALAMNHVHSFSVFEHTIFPSEYLSSHLESRLNRA 725
Query: 467 LVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSH 526
+V + +N T EI +PSELLA V+AY + +Q++ ++ D +R+ NALLQQTQ +DS
Sbjct: 726 IVSLAGYNATTQEILRPSELLAGVKAYTSFIQSLAQFLGTDASRIVRNALLQQTQPLDSC 785
Query: 527 GEKTVAALYIQWYSEVLLRRVS 548
GE+TV LY WY E LLR+ S
Sbjct: 786 GEQTVTTLYTNWYLESLLRQAS 807
Score = 289 (106.8 bits), Expect = 1.8e-45, Sum P(3) = 1.8e-45
Identities = 69/197 (35%), Positives = 112/197 (56%)
Query: 475 PDTSEIAKPSELLASV-RAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV-- 531
P K L+ ++ + ++N+ + H+ VF + + ++ + SH E +
Sbjct: 666 PGAESHRKNRSLVTNMDKLHLNLTELALAMNHVHSFSVFEHTIFP-SEYLSSHLESRLNR 724
Query: 532 AALYIQWYSEVL--LRRVSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRM 589
A + + Y+ + R SE +F++ ++ ++ D +R+ NALLQQTQ +
Sbjct: 725 AIVSLAGYNATTQEILRPSELLAGVKAYTSFIQ--SLAQFLGTDASRIVRNALLQQTQPL 782
Query: 590 DSHGEKTVAALYIQWYSEVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNEL 649
DS GE+TV LY WY E LLR+ S+G I S +AF+SL +G F+AEEFSD++E+
Sbjct: 783 DSCGEQTVTTLYTNWYLESLLRQASSGTIVLSPAMQAFISLPRDGEQNFSAEEFSDISEM 842
Query: 650 RALADLIGPYGMKLLNE 666
RALA+++GPYGMK L+E
Sbjct: 843 RALAEILGPYGMKFLSE 859
Score = 282 (104.3 bits), Expect = 2.8e-55, Sum P(3) = 2.8e-55
Identities = 56/114 (49%), Positives = 81/114 (71%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+ESC+K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMESCLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY-LSGHFDA 351
KFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY L DA
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVYELLNTIDA 114
Score = 179 (68.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 34/77 (44%), Positives = 54/77 (70%)
Query: 127 VNEMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACF 184
V E+A AAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + F
Sbjct: 964 VFELACAAGVSCDIDPALVAAIANLKADNSSPEEEYKVACLLLIFLAVSLPLLATDPSSF 1023
Query: 185 YLASLEGHSNNIHCMAR 201
+ +G++NNIHC+ +
Sbjct: 1024 FSIEKDGYNNNIHCLTK 1040
Score = 149 (57.5 bits), Expect = 3.6e-31, Sum P(2) = 3.6e-31
Identities = 31/69 (44%), Positives = 43/69 (62%)
Query: 650 RALADLIGPYGMKLL-------NELSLKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMK 702
R+ DLI Y +L L + +N AHEM+H D +FPRLGQM+++Y+ P+K
Sbjct: 129 RSYLDLIVTYTSVILLLSRIEDRRLLIGMYNCAHEMLHGHGDPSFPRLGQMVLEYDHPLK 188
Query: 703 KLSEEFIPH 711
KL+EEF PH
Sbjct: 189 KLTEEFGPH 197
Score = 43 (20.2 bits), Expect = 2.8e-55, Sum P(3) = 2.8e-55
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 373 PGAESYRKTR 382
PGAES+RK R
Sbjct: 666 PGAESHRKNR 675
Score = 40 (19.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 69 FRSITQSYYR---SAHALILVYDISCQPTFDC 97
FR++ Q + SAH L+ I C F C
Sbjct: 922 FRAMAQEGLQEVFSAHCPFLMGPIECLKEFSC 953
>UNIPROTKB|E2QVX0 [details] [associations]
symbol:NCKAP1L "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0090023 "positive regulation of
neutrophil chemotaxis" evidence=IEA] [GO:0070358 "actin
polymerization-dependent cell motility" evidence=IEA] [GO:0060100
"positive regulation of phagocytosis, engulfment" evidence=IEA]
[GO:0050853 "B cell receptor signaling pathway" evidence=IEA]
[GO:0048821 "erythrocyte development" evidence=IEA] [GO:0045648
"positive regulation of erythrocyte differentiation" evidence=IEA]
[GO:0045588 "positive regulation of gamma-delta T cell
differentiation" evidence=IEA] [GO:0045579 "positive regulation of
B cell differentiation" evidence=IEA] [GO:0043378 "positive
regulation of CD8-positive, alpha-beta T cell differentiation"
evidence=IEA] [GO:0043372 "positive regulation of CD4-positive,
alpha-beta T cell differentiation" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0043029 "T cell homeostasis" evidence=IEA] [GO:0042493
"response to drug" evidence=IEA] [GO:0042102 "positive regulation
of T cell proliferation" evidence=IEA] [GO:0035509 "negative
regulation of myosin-light-chain-phosphatase activity"
evidence=IEA] [GO:0033630 "positive regulation of cell adhesion
mediated by integrin" evidence=IEA] [GO:0032715 "negative
regulation of interleukin-6 production" evidence=IEA] [GO:0032700
"negative regulation of interleukin-17 production" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0031209
"SCAR complex" evidence=IEA] [GO:0030890 "positive regulation of B
cell proliferation" evidence=IEA] [GO:0030866 "cortical actin
cytoskeleton organization" evidence=IEA] [GO:0030838 "positive
regulation of actin filament polymerization" evidence=IEA]
[GO:0030675 "Rac GTPase activator activity" evidence=IEA]
[GO:0030593 "neutrophil chemotaxis" evidence=IEA] [GO:0030295
"protein kinase activator activity" evidence=IEA] [GO:0030011
"maintenance of cell polarity" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0002262 "myeloid cell homeostasis" evidence=IEA] [GO:0001782 "B
cell homeostasis" evidence=IEA] GO:GO:0005829 GO:GO:0043066
GO:GO:0006461 GO:GO:0042493 GO:GO:0030866 GO:GO:0030295
GO:GO:0030675 GO:GO:0032715 GO:GO:0030890 GO:GO:0045648
GO:GO:0033630 GO:GO:0042102 GO:GO:0048821 GO:GO:0043029
GO:GO:0030011 GO:GO:0001782 GO:GO:0002262 GO:GO:0045579
GO:GO:0050853 GO:GO:0090023 GO:GO:0030593 GO:GO:0060100
GO:GO:0043372 KO:K05750 InterPro:IPR019137 Pfam:PF09735
GO:GO:0045588 GO:GO:0032700 GO:GO:0070358 CTD:3071 GO:GO:0035509
GO:GO:0043378 RefSeq:XP_543618.2 Ensembl:ENSCAFT00000010414
GeneID:486492 KEGG:cfa:486492 NextBio:20860257 Uniprot:E2QVX0
Length = 1133
Score = 377 (137.8 bits), Expect = 1.8e-54, Sum P(3) = 1.8e-54
Identities = 73/142 (51%), Positives = 100/142 (70%)
Query: 407 PGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRA 466
PGAES+RK R +T MDKLH+ LTEL +N+ + V++ T P EYL HLE+R +RA
Sbjct: 660 PGAESHRKNRSIVTNMDKLHLHLTELALTMNHVHSFSVFEHTIFPSEYLSSHLEARLNRA 719
Query: 467 LVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSH 526
+V + +N T EIA+PSELLA V+AY++ +Q++ +V D++RV NALLQQTQ +DS
Sbjct: 720 IVWLAGYNAATQEIARPSELLAGVKAYISFIQSLAQFVGADVSRVIRNALLQQTQPLDSC 779
Query: 527 GEKTVAALYIQWYSEVLLRRVS 548
GE+T+ LY WY E LLR+ S
Sbjct: 780 GEQTITTLYTNWYLEGLLRQAS 801
Score = 301 (111.0 bits), Expect = 8.7e-46, Sum P(3) = 8.7e-46
Identities = 72/178 (40%), Positives = 108/178 (60%)
Query: 493 YMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV--AALYIQWYSEVL--LRRVS 548
++ L N+VH VF + + ++ + SH E + A +++ Y+ + R S
Sbjct: 681 HLTELALTMNHVH--SFSVFEHTIFP-SEYLSSHLEARLNRAIVWLAGYNAATQEIARPS 737
Query: 549 ETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEV 608
E ++F++ ++ +V D++RV NALLQQTQ +DS GE+T+ LY WY E
Sbjct: 738 ELLAGVKAYISFIQ--SLAQFVGADVSRVIRNALLQQTQPLDSCGEQTITTLYTNWYLEG 795
Query: 609 LLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
LLR+ S+G I + +AFVSL EG F+AEEFSDV+E+RALA+L+GPYGMK L+E
Sbjct: 796 LLRQASSGTITLAPAMQAFVSLPREGEQNFSAEEFSDVSEMRALAELLGPYGMKFLSE 853
Score = 272 (100.8 bits), Expect = 1.8e-54, Sum P(3) = 1.8e-54
Identities = 55/114 (48%), Positives = 80/114 (70%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+ES +K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMESSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY-LSGHFDA 351
KFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY L DA
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVYELLNTIDA 114
Score = 185 (70.2 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 38/93 (40%), Positives = 61/93 (65%)
Query: 114 LRVLVGGTSGLKI---VNEMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMV 168
L+ V + +K+ + E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL+V
Sbjct: 942 LKEFVTADTDIKVTLSIFELASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLLLV 1001
Query: 169 FVAVCIPKLARNEACFYLASLEGHSNNIHCMAR 201
F+A +P LA + A F+ +G++NNIHC+ +
Sbjct: 1002 FLAASLPLLATDPASFFSIEKDGYNNNIHCLTK 1034
Score = 143 (55.4 bits), Expect = 1.9e-29, Sum P(2) = 1.9e-29
Identities = 24/40 (60%), Positives = 33/40 (82%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM+H SD +F RLGQM+++Y+ P+KKL+EEF PH
Sbjct: 158 YNCAHEMLHGHSDPSFARLGQMVLEYDHPLKKLTEEFGPH 197
Score = 43 (20.2 bits), Expect = 1.8e-54, Sum P(3) = 1.8e-54
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 373 PGAESYRKTR 382
PGAES+RK R
Sbjct: 660 PGAESHRKNR 669
>UNIPROTKB|P55160 [details] [associations]
symbol:NCKAP1L "Nck-associated protein 1-like" species:9606
"Homo sapiens" [GO:0042493 "response to drug" evidence=IMP]
[GO:0030890 "positive regulation of B cell proliferation"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0050853 "B cell receptor signaling
pathway" evidence=IMP] [GO:0001782 "B cell homeostasis"
evidence=ISS] [GO:0002262 "myeloid cell homeostasis" evidence=ISS]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0032700
"negative regulation of interleukin-17 production" evidence=ISS]
[GO:0032715 "negative regulation of interleukin-6 production"
evidence=ISS] [GO:0033630 "positive regulation of cell adhesion
mediated by integrin" evidence=ISS] [GO:0042102 "positive
regulation of T cell proliferation" evidence=ISS] [GO:0043372
"positive regulation of CD4-positive, alpha-beta T cell
differentiation" evidence=ISS] [GO:0043378 "positive regulation of
CD8-positive, alpha-beta T cell differentiation" evidence=ISS]
[GO:0045588 "positive regulation of gamma-delta T cell
differentiation" evidence=ISS] [GO:0045621 "positive regulation of
lymphocyte differentiation" evidence=ISS] [GO:0045648 "positive
regulation of erythrocyte differentiation" evidence=ISS]
[GO:0060100 "positive regulation of phagocytosis, engulfment"
evidence=ISS] [GO:0048821 "erythrocyte development" evidence=IEP]
[GO:0030593 "neutrophil chemotaxis" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0042221 "response to chemical stimulus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031209 "SCAR complex" evidence=IDA] [GO:0032403 "protein
complex binding" evidence=IDA] [GO:0030838 "positive regulation of
actin filament polymerization" evidence=IMP] [GO:0030011
"maintenance of cell polarity" evidence=IMP] [GO:0030675 "Rac
GTPase activator activity" evidence=IMP] [GO:0070358 "actin
polymerization-dependent cell motility" evidence=IMP] [GO:0035509
"negative regulation of myosin-light-chain-phosphatase activity"
evidence=IMP] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0030295 "protein kinase activator activity"
evidence=IMP] [GO:0042327 "positive regulation of phosphorylation"
evidence=IMP] [GO:0030866 "cortical actin cytoskeleton
organization" evidence=IMP] [GO:0043029 "T cell homeostasis"
evidence=ISS] [GO:0045579 "positive regulation of B cell
differentiation" evidence=ISS] [GO:0090023 "positive regulation of
neutrophil chemotaxis" evidence=ISS] [GO:0016020 "membrane"
evidence=TAS] [GO:0032855 "positive regulation of Rac GTPase
activity" evidence=IMP] [GO:0045860 "positive regulation of protein
kinase activity" evidence=IMP] GO:GO:0005829 GO:GO:0043066
GO:GO:0005887 GO:GO:0006461 GO:GO:0032403 GO:GO:0042493
GO:GO:0030866 EMBL:CH471054 GO:GO:0030295 GO:GO:0031209
GO:GO:0030675 GO:GO:0032715 GO:GO:0030890 GO:GO:0045648
GO:GO:0033630 GO:GO:0030838 GO:GO:0042102 GO:GO:0048821
GO:GO:0043029 GO:GO:0030011 GO:GO:0001782 GO:GO:0002262
GO:GO:0045579 GO:GO:0050853 GO:GO:0090023 GO:GO:0030593
GO:GO:0060100 GO:GO:0043372 eggNOG:NOG287735 HOGENOM:HOG000231880
KO:K05750 InterPro:IPR019137 Pfam:PF09735 GO:GO:0045588
GO:GO:0032700 GO:GO:0070358 HOVERGEN:HBG006344 EMBL:M58285
EMBL:AK300783 EMBL:AC025570 EMBL:AC068789 EMBL:AC079313
EMBL:BC093769 EMBL:BC093771 IPI:IPI00023407 IPI:IPI00793989
PIR:S36666 RefSeq:NP_001171905.1 RefSeq:NP_005328.2
UniGene:Hs.182014 ProteinModelPortal:P55160 MINT:MINT-1711041
STRING:P55160 PhosphoSite:P55160 DMDM:218512111 PaxDb:P55160
PRIDE:P55160 Ensembl:ENST00000293373 Ensembl:ENST00000545638
GeneID:3071 KEGG:hsa:3071 UCSC:uc001sgc.4 CTD:3071
GeneCards:GC12P054891 HGNC:HGNC:4862 HPA:HPA039490 HPA:HPA040772
MIM:141180 neXtProt:NX_P55160 PharmGKB:PA29239 InParanoid:P55160
OMA:AFMALSF OrthoDB:EOG4894KS GenomeRNAi:3071 NextBio:12151
ArrayExpress:P55160 Bgee:P55160 CleanEx:HS_NCKAP1L
Genevestigator:P55160 GermOnline:ENSG00000123338 GO:GO:0035509
GO:GO:0043378 Uniprot:P55160
Length = 1127
Score = 369 (135.0 bits), Expect = 4.9e-53, Sum P(3) = 4.9e-53
Identities = 71/142 (50%), Positives = 97/142 (68%)
Query: 407 PGAESYRKTREELTTMDKLHMALTELCFAINYCTNIQVWDFTFAPREYLHQHLESRFSRA 466
PGAES+RK R +T MDKLH+ LTEL +N+ + V++ T P EYL HLE+R +RA
Sbjct: 661 PGAESHRKNRSIVTNMDKLHLNLTELALTMNHVYSFSVFEHTIFPSEYLSSHLEARLNRA 720
Query: 467 LVGMVMFNPDTSEIAKPSELLASVRAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSH 526
+V + +N T EI +PSELLA V+AY+ +Q++ ++ D +RV NALLQQTQ +DS
Sbjct: 721 IVWLAGYNATTQEIVRPSELLAGVKAYIGFIQSLAQFLGADASRVIRNALLQQTQPLDSC 780
Query: 527 GEKTVAALYIQWYSEVLLRRVS 548
GE+T+ LY WY E LLR+ S
Sbjct: 781 GEQTITTLYTNWYLESLLRQAS 802
Score = 298 (110.0 bits), Expect = 6.2e-45, Sum P(3) = 6.2e-45
Identities = 69/180 (38%), Positives = 107/180 (59%)
Query: 491 RAYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTV--AALYIQWYSEVL--LRR 546
+ ++N+ + H+ VF + + ++ + SH E + A +++ Y+ + R
Sbjct: 678 KLHLNLTELALTMNHVYSFSVFEHTIFP-SEYLSSHLEARLNRAIVWLAGYNATTQEIVR 736
Query: 547 VSETQVKSLNLLNFLRVYTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYS 606
SE + F++ ++ ++ D +RV NALLQQTQ +DS GE+T+ LY WY
Sbjct: 737 PSELLAGVKAYIGFIQ--SLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYL 794
Query: 607 EVLLRRVSAGNICFSLNQRAFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
E LLR+ S+G I S +AFVSL EG F+AEEFSD++E+RALA+L+GPYGMK L+E
Sbjct: 795 ESLLRQASSGTIILSPAMQAFVSLPREGEQNFSAEEFSDISEMRALAELLGPYGMKFLSE 854
Score = 267 (99.0 bits), Expect = 4.9e-53, Sum P(3) = 4.9e-53
Identities = 54/114 (47%), Positives = 79/114 (69%)
Query: 243 MQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVK 302
M + + KLAEKLTI++DRG G+L R+YNIKK C D KSKP FL +KS+E +K I K
Sbjct: 1 MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMEPSLKYINK 60
Query: 303 KFPNIDIKS----VSGISQIRSDIVKSLSLYYYTFVDLLHFKDCVY-LSGHFDA 351
KFPNID+++ + + + +++I++ L+ YY +FVD++ F+D VY L DA
Sbjct: 61 KFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVYELLNTIDA 114
Score = 187 (70.9 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 35/75 (46%), Positives = 54/75 (72%)
Query: 129 EMASAAGLLCTVDPALATALASDKTDLD--EDEHVLACLLMVFVAVCIPKLARNEACFYL 186
E+ASAAG+ C +DPAL A+A+ K D E+E+ +ACLL++F+AV +P LA + + FY
Sbjct: 961 ELASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSLPLLATDPSSFYS 1020
Query: 187 ASLEGHSNNIHCMAR 201
+G++NNIHC+ +
Sbjct: 1021 IEKDGYNNNIHCLTK 1035
Score = 139 (54.0 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 672 FNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIPH 711
+N AHEM+H D +F RLGQM+++Y+ P+KKL+EEF PH
Sbjct: 158 YNCAHEMLHGHGDPSFARLGQMVLEYDHPLKKLTEEFGPH 197
Score = 43 (20.2 bits), Expect = 4.9e-53, Sum P(3) = 4.9e-53
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 373 PGAESYRKTR 382
PGAES+RK R
Sbjct: 661 PGAESHRKNR 670
>WB|WBGene00004282 [details] [associations]
symbol:rab-30 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 KO:K07917
HSSP:P32939 EMBL:AL032621 PIR:T26941 RefSeq:NP_499328.1
ProteinModelPortal:Q9XWZ3 SMR:Q9XWZ3 EnsemblMetazoa:Y45F3A.2.1
EnsemblMetazoa:Y45F3A.2.2 GeneID:176476 KEGG:cel:CELE_Y45F3A.2
UCSC:Y45F3A.2 CTD:176476 WormBase:Y45F3A.2 InParanoid:Q9XWZ3
NextBio:892750 ArrayExpress:Q9XWZ3 Uniprot:Q9XWZ3
Length = 216
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 97/119 (81%), Positives = 113/119 (94%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDYK+LFKVVLVGNAGVGKTCLVR+FTQG+FPPGQ ATIGVDFMIKTV++ N++IKLQI
Sbjct: 1 MEDYKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSAHA++LVYD+SCQP+FDCL +WL EIE YA+ +VL++LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSAHAIVLVYDVSCQPSFDCLPEWLGEIESYANRRVLKILVG 119
Score = 126 (49.4 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 33/100 (33%), Positives = 55/100 (55%)
Query: 165 LLMVFVAVCIPKLARNEACF--YLASLEGHSNN--IHCMARNKIDRED-REIPTEVGEDF 219
+++V+ C P C +L +E ++N + + NK+D+ D RE+P +G DF
Sbjct: 83 IVLVYDVSCQPSFD----CLPEWLGEIESYANRRVLKILVGNKVDKGDEREVPERIGRDF 138
Query: 220 AKRHDM-YYLETSAKASDNVEKLFMQIAAELMEKLAEKLT 258
+ + Y+LETSA + NV++LF Q+A L + KLT
Sbjct: 139 SDVNQFDYFLETSALDATNVDQLFEQVATRLTNDM--KLT 176
>UNIPROTKB|Q17QB7 [details] [associations]
symbol:RAB30 "Ras-related protein Rab-30" species:9913 "Bos
taurus" [GO:0031985 "Golgi cisterna" evidence=ISS] [GO:0005802
"trans-Golgi network" evidence=ISS] [GO:0005801 "cis-Golgi network"
evidence=ISS] [GO:0007030 "Golgi organization" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0005802 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0007030 GO:GO:0005801 GO:GO:0031985 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 EMBL:BC118448
IPI:IPI00709312 RefSeq:NP_001069697.1 UniGene:Bt.91675
ProteinModelPortal:Q17QB7 SMR:Q17QB7 Ensembl:ENSBTAT00000003135
GeneID:540583 KEGG:bta:540583 CTD:27314 InParanoid:Q17QB7 KO:K07917
OMA:DYKFLFK OrthoDB:EOG43XV4G NextBio:20878714 Uniprot:Q17QB7
Length = 203
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 99/119 (83%), Positives = 111/119 (93%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 121
Score = 156 (60.0 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 35/81 (43%), Positives = 55/81 (67%)
Query: 185 YLASLEGHSNN--IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L +E +++N I + NKID E RE+ + E+F++ DMYYLETSAK SDNVEKL
Sbjct: 103 WLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKL 162
Query: 242 FMQIAAELMEKLAEKLTIMHD 262
F+ +A L+ + A + T++++
Sbjct: 163 FLDLACRLISE-ARQNTLVNN 182
>UNIPROTKB|E2RG98 [details] [associations]
symbol:RAB30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104044 CTD:27314 KO:K07917 OMA:DYKFLFK
EMBL:AAEX03012758 RefSeq:XP_533993.1 ProteinModelPortal:E2RG98
SMR:E2RG98 Ensembl:ENSCAFT00000007438 GeneID:476787 KEGG:cfa:476787
NextBio:20852396 Uniprot:E2RG98
Length = 203
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 99/119 (83%), Positives = 111/119 (93%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 121
Score = 156 (60.0 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 35/81 (43%), Positives = 55/81 (67%)
Query: 185 YLASLEGHSNN--IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L +E +++N I + NKID E RE+ + E+F++ DMYYLETSAK SDNVEKL
Sbjct: 103 WLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKL 162
Query: 242 FMQIAAELMEKLAEKLTIMHD 262
F+ +A L+ + A + T++++
Sbjct: 163 FLDLACRLISE-ARQNTLVNN 182
>UNIPROTKB|Q15771 [details] [associations]
symbol:RAB30 "Ras-related protein Rab-30" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0007030 "Golgi organization"
evidence=IMP] [GO:0005801 "cis-Golgi network" evidence=IDA]
[GO:0031985 "Golgi cisterna" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0005795 "Golgi stack" evidence=TAS] [GO:0006184 "GTP catabolic
process" evidence=TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0003924 GO:GO:0005802 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0007030 GO:GO:0005801 GO:GO:0031985
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:27314 KO:K07917
OMA:DYKFLFK OrthoDB:EOG43XV4G EMBL:U57092 EMBL:AF498956
EMBL:CR542106 EMBL:BC014213 IPI:IPI00302030 PIR:JC4962
RefSeq:NP_055303.2 UniGene:Hs.40758 PDB:2EW1 PDBsum:2EW1
ProteinModelPortal:Q15771 SMR:Q15771 IntAct:Q15771 STRING:Q15771
PhosphoSite:Q15771 DMDM:38258937 PaxDb:Q15771 PRIDE:Q15771
DNASU:27314 Ensembl:ENST00000260056 Ensembl:ENST00000527633
Ensembl:ENST00000533486 GeneID:27314 KEGG:hsa:27314 UCSC:uc001ozu.3
GeneCards:GC11M082692 HGNC:HGNC:9770 MIM:605693 neXtProt:NX_Q15771
PharmGKB:PA34121 InParanoid:Q15771 PhylomeDB:Q15771
EvolutionaryTrace:Q15771 GenomeRNAi:27314 NextBio:50315
ArrayExpress:Q15771 Bgee:Q15771 CleanEx:HS_RAB30
Genevestigator:Q15771 GermOnline:ENSG00000137502 Uniprot:Q15771
Length = 203
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 99/119 (83%), Positives = 111/119 (93%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 121
Score = 156 (60.0 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 35/81 (43%), Positives = 55/81 (67%)
Query: 185 YLASLEGHSNN--IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L +E +++N I + NKID E RE+ + E+F++ DMYYLETSAK SDNVEKL
Sbjct: 103 WLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKL 162
Query: 242 FMQIAAELMEKLAEKLTIMHD 262
F+ +A L+ + A + T++++
Sbjct: 163 FLDLACRLISE-ARQNTLVNN 182
>MGI|MGI:1923235 [details] [associations]
symbol:Rab30 "RAB30, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005801
"cis-Golgi network" evidence=ISO] [GO:0005802 "trans-Golgi network"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007030 "Golgi organization" evidence=ISO] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0031985 "Golgi cisterna" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1923235
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0005802 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0007030 GO:GO:0005801 GO:GO:0031985 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 CTD:27314
KO:K07917 OMA:DYKFLFK OrthoDB:EOG43XV4G EMBL:AF399756 EMBL:AK017185
EMBL:AK142206 EMBL:BC017550 IPI:IPI00331205 RefSeq:NP_083770.2
UniGene:Mm.389966 ProteinModelPortal:Q923S9 SMR:Q923S9
STRING:Q923S9 PhosphoSite:Q923S9 PaxDb:Q923S9 PRIDE:Q923S9
Ensembl:ENSMUST00000032879 Ensembl:ENSMUST00000107180 GeneID:75985
KEGG:mmu:75985 InParanoid:Q923S9 NextBio:344381 Bgee:Q923S9
CleanEx:MM_RAB30 Genevestigator:Q923S9
GermOnline:ENSMUSG00000030643 Uniprot:Q923S9
Length = 203
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 99/119 (83%), Positives = 111/119 (93%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 121
Score = 156 (60.0 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 35/81 (43%), Positives = 55/81 (67%)
Query: 185 YLASLEGHSNN--IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L +E +++N I + NKID E RE+ + E+F++ DMYYLETSAK SDNVEKL
Sbjct: 103 WLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKL 162
Query: 242 FMQIAAELMEKLAEKLTIMHD 262
F+ +A L+ + A + T++++
Sbjct: 163 FLDLACRLISE-ARQNTLVNN 182
>UNIPROTKB|D4AA97 [details] [associations]
symbol:Rab30 "RAB30, member RAS oncogene family, isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:1309507 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 EMBL:CH473956 OMA:DYKFLFK OrthoDB:EOG43XV4G
IPI:IPI00781739 UniGene:Rn.161854 SMR:D4AA97
Ensembl:ENSRNOT00000055380 Uniprot:D4AA97
Length = 203
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 99/119 (83%), Positives = 111/119 (93%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 121
Score = 156 (60.0 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 35/81 (43%), Positives = 55/81 (67%)
Query: 185 YLASLEGHSNN--IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L +E +++N I + NKID E RE+ + E+F++ DMYYLETSAK SDNVEKL
Sbjct: 103 WLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKL 162
Query: 242 FMQIAAELMEKLAEKLTIMHD 262
F+ +A L+ + A + T++++
Sbjct: 163 FLDLACRLISE-ARQNTLVNN 182
>UNIPROTKB|E9PMJ1 [details] [associations]
symbol:RAB30 "Ras-related protein Rab-30" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AP000893
HGNC:HGNC:9770 EMBL:AP001767 IPI:IPI00978752
ProteinModelPortal:E9PMJ1 SMR:E9PMJ1 Ensembl:ENST00000531021
ArrayExpress:E9PMJ1 Bgee:E9PMJ1 Uniprot:E9PMJ1
Length = 168
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 99/119 (83%), Positives = 111/119 (93%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 121
Score = 147 (56.8 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 185 YLASLEGHSNN--IHCMARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L +E +++N I + NKID E RE+ + E+F++ DMYYLETSAK SDNVEKL
Sbjct: 103 WLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKL 162
Query: 242 FMQIA 246
F+ +A
Sbjct: 163 FLDLA 167
>UNIPROTKB|E9PNB9 [details] [associations]
symbol:RAB30 "Ras-related protein Rab-30" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AP000893
HGNC:HGNC:9770 EMBL:AP001767 IPI:IPI00982387
ProteinModelPortal:E9PNB9 SMR:E9PNB9 Ensembl:ENST00000532548
ArrayExpress:E9PNB9 Bgee:E9PNB9 Uniprot:E9PNB9
Length = 122
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 99/119 (83%), Positives = 111/119 (93%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 121
>UNIPROTKB|E9PS06 [details] [associations]
symbol:RAB30 "Ras-related protein Rab-30" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AP000893
HGNC:HGNC:9770 EMBL:AP001767 IPI:IPI00977555
ProteinModelPortal:E9PS06 SMR:E9PS06 Ensembl:ENST00000534301
ArrayExpress:E9PS06 Bgee:E9PS06 Uniprot:E9PS06
Length = 139
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 99/119 (83%), Positives = 111/119 (93%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 121
>UNIPROTKB|F2Z5W1 [details] [associations]
symbol:RAB30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GeneTree:ENSGT00700000104044 EMBL:FP017140
ProteinModelPortal:F2Z5W1 SMR:F2Z5W1 Ensembl:ENSSSCT00000016255
OMA:HWIQEIN Uniprot:F2Z5W1
Length = 122
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 99/119 (83%), Positives = 111/119 (93%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 121
>UNIPROTKB|Q6MZH2 [details] [associations]
symbol:DKFZp686J07132 "Ras-related protein Rab-30"
species:9606 "Homo sapiens" [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR005225 Pfam:PF00071
PRINTS:PR00449 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
HOVERGEN:HBG009351 EMBL:AP000893 HOGENOM:HOG000233968
UniGene:Hs.40758 HGNC:HGNC:9770 EMBL:AP001767 EMBL:BX641138
IPI:IPI00425916 SMR:Q6MZH2 STRING:Q6MZH2 Ensembl:ENST00000534141
UCSC:uc001ozv.3 Uniprot:Q6MZH2
Length = 164
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 99/125 (79%), Positives = 112/125 (89%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGG 120
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VL
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLATR 122
Query: 121 TSGLK 125
+ LK
Sbjct: 123 LTWLK 127
>UNIPROTKB|F1NWF1 [details] [associations]
symbol:RAB30 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104044 OMA:DYKFLFK
EMBL:AADN02004733 EMBL:AADN02004734 IPI:IPI00589217
Ensembl:ENSGALT00000027882 Uniprot:F1NWF1
Length = 199
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 107/167 (64%), Positives = 127/167 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQIWD
Sbjct: 1 DYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWD 60
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS KV+ VLVG
Sbjct: 61 TAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKI 120
Query: 123 GLKIVNEMAS--AAGLLCTVDPALATALASDKTDLDEDEHVLACLLM 167
L E++ AA D A + ++++ LAC L+
Sbjct: 121 DLADKREVSQQRAAEFSEAQDMYYLETSAKESDNVEKLFLDLACRLI 167
Score = 151 (58.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 34/81 (41%), Positives = 54/81 (66%)
Query: 185 YLASLEGHSNN--IHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L +E +++N I + NKID D RE+ + +F++ DMYYLETSAK SDNVEKL
Sbjct: 99 WLREIEQYASNKVITVLVGNKIDLADKREVSQQRAAEFSEAQDMYYLETSAKESDNVEKL 158
Query: 242 FMQIAAELMEKLAEKLTIMHD 262
F+ +A L+ + A + T++++
Sbjct: 159 FLDLACRLISE-ARQNTLVNN 178
>UNIPROTKB|E9PRF7 [details] [associations]
symbol:RAB30 "Ras-related protein Rab-30" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AP000893
HGNC:HGNC:9770 EMBL:AP001767 IPI:IPI00983314
ProteinModelPortal:E9PRF7 SMR:E9PRF7 Ensembl:ENST00000526205
ArrayExpress:E9PRF7 Bgee:E9PRF7 Uniprot:E9PRF7
Length = 114
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 94/112 (83%), Positives = 105/112 (93%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFK 112
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YAS K
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNK 114
>ZFIN|ZDB-GENE-040718-250 [details] [associations]
symbol:rab30 "RAB30, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040718-250 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 CTD:27314 KO:K07917 OMA:DYKFLFK
OrthoDB:EOG43XV4G EMBL:CR538726 EMBL:BC076437 IPI:IPI00506069
RefSeq:NP_001002750.1 UniGene:Dr.32093 SMR:Q6DGB3
Ensembl:ENSDART00000055220 GeneID:437023 KEGG:dre:437023
InParanoid:Q6DGB3 NextBio:20831438 Uniprot:Q6DGB3
Length = 201
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 93/119 (78%), Positives = 109/119 (91%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY +LFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEI ++KLQI
Sbjct: 1 MEDYDYLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGVKVKLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL +WLREIE+YA+ +V+ +LVG
Sbjct: 61 WDTAGQERFRSITQSYYRSANALILTYDITCEDSFRCLPEWLREIEQYANNQVVTILVG 119
Score = 149 (57.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 35/78 (44%), Positives = 51/78 (65%)
Query: 185 YLASLEGHSNN--IHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
+L +E ++NN + + NKID D RE+ + E+FA M YLETSAK SDNVEKL
Sbjct: 101 WLREIEQYANNQVVTILVGNKIDLADKREVLRQRAEEFADSQSMLYLETSAKESDNVEKL 160
Query: 242 FMQIAAELMEKLAEKLTI 259
F+ +A EL+ + A++ T+
Sbjct: 161 FLDLACELIRE-AKQNTL 177
>WB|WBGene00001580 [details] [associations]
symbol:gex-3 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040039
"inductive cell migration" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0030054 "cell junction" evidence=IDA]
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0018991 GO:GO:0040010 GO:GO:0007411 GO:GO:0002119
GO:GO:0030054 GO:GO:0040035 GO:GO:0040039 GO:GO:0010172 EMBL:Z70684
EMBL:AB073210 EMBL:Z70682 PIR:T20611 RefSeq:NP_502368.1
UniGene:Cel.5137 ProteinModelPortal:P55163 IntAct:P55163
STRING:P55163 PaxDb:P55163 EnsemblMetazoa:F28D1.10 GeneID:178191
KEGG:cel:CELE_F28D1.10 UCSC:F28D1.10 CTD:178191 WormBase:F28D1.10
eggNOG:NOG287735 GeneTree:ENSGT00390000016619 HOGENOM:HOG000231880
InParanoid:P55163 KO:K05750 OMA:SCFPYAL NextBio:900102
InterPro:IPR019137 Pfam:PF09735 Uniprot:P55163
Length = 1141
Score = 304 (112.1 bits), Expect = 3.2e-46, Sum P(3) = 3.2e-46
Identities = 70/177 (39%), Positives = 92/177 (51%)
Query: 373 PGAESYRKTREEAQIASRRXXXXXXXXXXXXXXXPGAESYRKTREELTTMDKLHMALTEL 432
P A + R + Q G ESYR R+ LT DKL L E+
Sbjct: 627 PSAVAVRVVAQVVQQKGSGKAAAAAAAAARDYFIAGEESYRVDRQALTMPDKLQTTLLEI 686
Query: 433 CFAINYCTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFN-PDTSEIAKPSELLASVR 491
A+ I V D TFAPR YL Q LE++F L GM P S +PSE+L +++
Sbjct: 687 SAALGAHRQIYVADHTFAPRTYLAQSLETKFVELLHGMFWEGQPHASNPKRPSEMLLALQ 746
Query: 492 AYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVS 548
AYM VLQ ++ + +D++ LLQQTQ +DS + T+AALY +WY EVLLRR S
Sbjct: 747 AYMTVLQNLDTAISVDISNTMQTTLLQQTQLVDSKNKDTIAALYTKWYLEVLLRRAS 803
Score = 274 (101.5 bits), Expect = 3.2e-46, Sum P(3) = 3.2e-46
Identities = 54/94 (57%), Positives = 69/94 (73%)
Query: 252 KLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS 311
K+AEKL I++DR GM+TRIYNIKK+ GD+K KP FLSDK +E IK IV+KFP +D +S
Sbjct: 10 KIAEKLVILNDRAAGMMTRIYNIKKSSGDSKVKPQFLSDKKMEGAIKHIVRKFPVVDCRS 69
Query: 312 VSG----ISQIRSDIVKSLSLYYYTFVDLLHFKD 341
S + + ++I KSLSLYYYTF D+L KD
Sbjct: 70 NSSTFEYVQEKSTEITKSLSLYYYTFADILDLKD 103
Score = 222 (83.2 bits), Expect = 2.0e-37, Sum P(3) = 2.0e-37
Identities = 43/101 (42%), Positives = 67/101 (66%)
Query: 566 VENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSLNQR 625
++ + +D++ LLQQTQ +DS + T+AALY +WY EVLLRR S+G++ +S + R
Sbjct: 755 LDTAISVDISNTMQTTLLQQTQLVDSKNKDTIAALYTKWYLEVLLRRASSGHMVWSEHLR 814
Query: 626 AFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+S + + + F + +SD ELRAL +IGPYG+KL+ E
Sbjct: 815 TMLS-SGQEQLSFMPDHYSDPQELRALVQIIGPYGVKLMTE 854
Score = 153 (58.9 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 44/118 (37%), Positives = 63/118 (53%)
Query: 96 DCLTDWLREIEE------YASFKVLRVLVGGTSGLKIVNEMASAAGLLCTVDPALATALA 149
D L D LR I E ASF +L + +KI EM++A G+ VD +L A+
Sbjct: 932 DALHDALRHIVESKLPFLQASFDMLYHNLDDVDKVKI-GEMSAAMGVTGPVDMSLVNAVR 990
Query: 150 SDKTDLDEDEH-VLACLLMVFVAVCIPKLARNEACFYLASLEGHSNNIHC--MARNKI 204
+ ++ EH V +CLLMV VA+CIP++ ++ Y S++ NN HC MA N I
Sbjct: 991 AQNPNIHPQEHYVNSCLLMVAVAICIPRIGMSDLSSYKPSIQASLNNSHCVPMAINTI 1048
Score = 136 (52.9 bits), Expect = 6.3e-29, Sum P(2) = 6.3e-29
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIP 710
L FNAA+++ H QS+ +FPRLGQMI+DYE P+KKL E+ P
Sbjct: 155 LGLFNAAYDLQHGQSEASFPRLGQMILDYENPLKKLHEDLGP 196
Score = 42 (19.8 bits), Expect = 3.2e-46, Sum P(3) = 3.2e-46
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 666 ELSLKAFNAAHEMV-HNQSDVNFPRLGQM 693
E L A+ +M+ HN DV+ ++G+M
Sbjct: 943 ESKLPFLQASFDMLYHNLDDVDKVKIGEM 971
Score = 39 (18.8 bits), Expect = 6.7e-46, Sum P(3) = 6.7e-46
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 646 VNELRALADLIGPYGMKLLNELSLKAFNAAHEMVH 680
+ E+ A + GP M L+N + + N H H
Sbjct: 968 IGEMSAAMGVTGPVDMSLVNAVRAQNPNI-HPQEH 1001
>UNIPROTKB|P55163 [details] [associations]
symbol:gex-3 "Membrane-associated protein gex-3"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0018991 "oviposition" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] GO:GO:0009792 GO:GO:0006898 GO:GO:0005737
GO:GO:0040007 GO:GO:0018991 GO:GO:0040010 GO:GO:0007411
GO:GO:0002119 GO:GO:0030054 GO:GO:0040035 GO:GO:0040039
GO:GO:0010172 EMBL:Z70684 EMBL:AB073210 EMBL:Z70682 PIR:T20611
RefSeq:NP_502368.1 UniGene:Cel.5137 ProteinModelPortal:P55163
IntAct:P55163 STRING:P55163 PaxDb:P55163 EnsemblMetazoa:F28D1.10
GeneID:178191 KEGG:cel:CELE_F28D1.10 UCSC:F28D1.10 CTD:178191
WormBase:F28D1.10 eggNOG:NOG287735 GeneTree:ENSGT00390000016619
HOGENOM:HOG000231880 InParanoid:P55163 KO:K05750 OMA:SCFPYAL
NextBio:900102 InterPro:IPR019137 Pfam:PF09735 Uniprot:P55163
Length = 1141
Score = 304 (112.1 bits), Expect = 3.2e-46, Sum P(3) = 3.2e-46
Identities = 70/177 (39%), Positives = 92/177 (51%)
Query: 373 PGAESYRKTREEAQIASRRXXXXXXXXXXXXXXXPGAESYRKTREELTTMDKLHMALTEL 432
P A + R + Q G ESYR R+ LT DKL L E+
Sbjct: 627 PSAVAVRVVAQVVQQKGSGKAAAAAAAAARDYFIAGEESYRVDRQALTMPDKLQTTLLEI 686
Query: 433 CFAINYCTNIQVWDFTFAPREYLHQHLESRFSRALVGMVMFN-PDTSEIAKPSELLASVR 491
A+ I V D TFAPR YL Q LE++F L GM P S +PSE+L +++
Sbjct: 687 SAALGAHRQIYVADHTFAPRTYLAQSLETKFVELLHGMFWEGQPHASNPKRPSEMLLALQ 746
Query: 492 AYMNVLQTVENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVS 548
AYM VLQ ++ + +D++ LLQQTQ +DS + T+AALY +WY EVLLRR S
Sbjct: 747 AYMTVLQNLDTAISVDISNTMQTTLLQQTQLVDSKNKDTIAALYTKWYLEVLLRRAS 803
Score = 274 (101.5 bits), Expect = 3.2e-46, Sum P(3) = 3.2e-46
Identities = 54/94 (57%), Positives = 69/94 (73%)
Query: 252 KLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQIVKKFPNIDIKS 311
K+AEKL I++DR GM+TRIYNIKK+ GD+K KP FLSDK +E IK IV+KFP +D +S
Sbjct: 10 KIAEKLVILNDRAAGMMTRIYNIKKSSGDSKVKPQFLSDKKMEGAIKHIVRKFPVVDCRS 69
Query: 312 VSG----ISQIRSDIVKSLSLYYYTFVDLLHFKD 341
S + + ++I KSLSLYYYTF D+L KD
Sbjct: 70 NSSTFEYVQEKSTEITKSLSLYYYTFADILDLKD 103
Score = 222 (83.2 bits), Expect = 2.0e-37, Sum P(3) = 2.0e-37
Identities = 43/101 (42%), Positives = 67/101 (66%)
Query: 566 VENYVHIDMTRVFNNALLQQTQRMDSHGEKTVAALYIQWYSEVLLRRVSAGNICFSLNQR 625
++ + +D++ LLQQTQ +DS + T+AALY +WY EVLLRR S+G++ +S + R
Sbjct: 755 LDTAISVDISNTMQTTLLQQTQLVDSKNKDTIAALYTKWYLEVLLRRASSGHMVWSEHLR 814
Query: 626 AFVSLTAEGAIPFNAEEFSDVNELRALADLIGPYGMKLLNE 666
+S + + + F + +SD ELRAL +IGPYG+KL+ E
Sbjct: 815 TMLS-SGQEQLSFMPDHYSDPQELRALVQIIGPYGVKLMTE 854
Score = 153 (58.9 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 44/118 (37%), Positives = 63/118 (53%)
Query: 96 DCLTDWLREIEE------YASFKVLRVLVGGTSGLKIVNEMASAAGLLCTVDPALATALA 149
D L D LR I E ASF +L + +KI EM++A G+ VD +L A+
Sbjct: 932 DALHDALRHIVESKLPFLQASFDMLYHNLDDVDKVKI-GEMSAAMGVTGPVDMSLVNAVR 990
Query: 150 SDKTDLDEDEH-VLACLLMVFVAVCIPKLARNEACFYLASLEGHSNNIHC--MARNKI 204
+ ++ EH V +CLLMV VA+CIP++ ++ Y S++ NN HC MA N I
Sbjct: 991 AQNPNIHPQEHYVNSCLLMVAVAICIPRIGMSDLSSYKPSIQASLNNSHCVPMAINTI 1048
Score = 136 (52.9 bits), Expect = 6.3e-29, Sum P(2) = 6.3e-29
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 669 LKAFNAAHEMVHNQSDVNFPRLGQMIMDYEVPMKKLSEEFIP 710
L FNAA+++ H QS+ +FPRLGQMI+DYE P+KKL E+ P
Sbjct: 155 LGLFNAAYDLQHGQSEASFPRLGQMILDYENPLKKLHEDLGP 196
Score = 42 (19.8 bits), Expect = 3.2e-46, Sum P(3) = 3.2e-46
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 666 ELSLKAFNAAHEMV-HNQSDVNFPRLGQM 693
E L A+ +M+ HN DV+ ++G+M
Sbjct: 943 ESKLPFLQASFDMLYHNLDDVDKVKIGEM 971
Score = 39 (18.8 bits), Expect = 6.7e-46, Sum P(3) = 6.7e-46
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 646 VNELRALADLIGPYGMKLLNELSLKAFNAAHEMVH 680
+ E+ A + GP M L+N + + N H H
Sbjct: 968 IGEMSAAMGVTGPVDMSLVNAVRAQNPNI-HPQEH 1001
>UNIPROTKB|E9PJQ5 [details] [associations]
symbol:RAB30 "Ras-related protein Rab-30" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AP000893
HGNC:HGNC:9770 EMBL:AP001767 IPI:IPI00981677
ProteinModelPortal:E9PJQ5 SMR:E9PJQ5 Ensembl:ENST00000534103
ArrayExpress:E9PJQ5 Bgee:E9PJQ5 Uniprot:E9PJQ5
Length = 100
Score = 457 (165.9 bits), Expect = 6.6e-43, P = 6.6e-43
Identities = 84/98 (85%), Positives = 93/98 (94%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
MEDY FLFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEIN E++KLQI
Sbjct: 3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 62
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCL 98
WDTAGQERFRSITQSYYRSA+ALIL YDI+C+ +F CL
Sbjct: 63 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCL 100
>SGD|S000001856 [details] [associations]
symbol:YPT1 "Rab family GTPase" species:4932 "Saccharomyces
cerevisiae" [GO:0006461 "protein complex assembly" evidence=IDA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;IDA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0048211
"Golgi vesicle docking" evidence=IMP] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0000149 "SNARE binding" evidence=IDA;IPI]
[GO:0035494 "SNARE complex disassembly" evidence=IMP] [GO:0005795
"Golgi stack" evidence=IDA] [GO:0032456 "endocytic recycling"
evidence=IMP] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IMP] [GO:0090114 "COPII-coated vesicle budding"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0000139
"Golgi membrane" evidence=IEA;IDA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IGI;IMP]
[GO:0048194 "Golgi vesicle budding" evidence=IGI] [GO:0034498
"early endosome to Golgi transport" evidence=IMP] [GO:0005802
"trans-Golgi network" evidence=IDA] [GO:0016236 "macroautophagy"
evidence=IMP] [GO:0032258 "CVT pathway" evidence=IMP] [GO:0000407
"pre-autophagosomal structure" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 SGD:S000001856 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0007264 GO:GO:0000139 GO:GO:0006461
GO:GO:0005789 GO:GO:0003924 GO:GO:0005795 EMBL:D50617 EMBL:BK006940
GO:GO:0005802 PROSITE:PS51419 GO:GO:0048194 GO:GO:0032456
GO:GO:0016236 eggNOG:COG1100 GO:GO:0006890 GO:GO:0032258
GO:GO:0000407 GO:GO:0034498 PDB:3CUE PDBsum:3CUE GO:GO:0000149
PDB:1UKV PDB:2BCG PDBsum:1UKV PDBsum:2BCG HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 KO:K07874 OMA:MIMASEI GO:GO:0090114
GO:GO:0035494 GO:GO:0048211 EMBL:X00209 OrthoDB:EOG49W5QK
EMBL:AY558467 PIR:S56216 RefSeq:NP_116615.1 PDB:1YZN PDBsum:1YZN
ProteinModelPortal:P01123 SMR:P01123 DIP:DIP-2019N IntAct:P01123
MINT:MINT-389361 STRING:P01123 PaxDb:P01123 PeptideAtlas:P01123
PRIDE:P01123 EnsemblFungi:YFL038C GeneID:850505 KEGG:sce:YFL038C
CYGD:YFL038c EvolutionaryTrace:P01123 NextBio:966209
Genevestigator:P01123 GermOnline:YFL038C Uniprot:P01123
Length = 206
Score = 364 (133.2 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 66/123 (53%), Positives = 95/123 (77%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+GN+GVGK+CL+ RF+ + +TIGVDF IKTVE++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR +H +I+VYD++ Q +F+ + WL+EI+ YA+ VL++LVG
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKC 123
Query: 123 GLK 125
LK
Sbjct: 124 DLK 126
Score = 97 (39.2 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 193 SNNIHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELME 251
S + + NK D +D R + +V ++FA + M +LETSA S NVE F+ +A ++ E
Sbjct: 112 STVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKE 171
Query: 252 KLAEK 256
++++
Sbjct: 172 SMSQQ 176
>UNIPROTKB|P22127 [details] [associations]
symbol:P22127 "Ras-related protein Rab-10" species:7785
"Discopyge ommata" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0005768 "endosome" evidence=ISS] [GO:0005789 "endoplasmic
reticulum membrane" evidence=ISS] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005802 "trans-Golgi network" evidence=ISS]
[GO:0006893 "Golgi to plasma membrane transport" evidence=ISS]
[GO:0007409 "axonogenesis" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS]
[GO:0030859 "polarized epithelial cell differentiation"
evidence=ISS] [GO:0032593 "insulin-responsive compartment"
evidence=ISS] [GO:0032869 "cellular response to insulin stimulus"
evidence=ISS] [GO:0043001 "Golgi to plasma membrane protein
transport" evidence=ISS] [GO:0045200 "establishment of neuroblast
polarity" evidence=ISS] [GO:0055037 "recycling endosome"
evidence=ISS] [GO:0061467 "basolateral protein localization"
evidence=ISS] [GO:0071782 "endoplasmic reticulum tubular network"
evidence=ISS] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=ISS] [GO:0072372 "primary cilium"
evidence=ISS] [GO:0072659 "protein localization to plasma membrane"
evidence=ISS] [GO:0097051 "establishment of protein localization to
endoplasmic reticulum membrane" evidence=ISS] [GO:0000145 "exocyst"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0030670
GO:GO:0032869 GO:GO:0016197 GO:GO:0055037 GO:GO:0007409
GO:GO:0005802 GO:GO:0072372 GO:GO:0072659 PROSITE:PS51419
GO:GO:0032593 GO:GO:0043001 GO:GO:0055038 GO:GO:0019003
HOVERGEN:HBG009351 GO:GO:0045200 GO:GO:0030859 EMBL:M38390
PIR:A38625 ProteinModelPortal:P22127 SMR:P22127 PRIDE:P22127
Uniprot:P22127
Length = 200
Score = 329 (120.9 bits), Expect = 4.7e-39, Sum P(2) = 4.7e-39
Identities = 62/116 (53%), Positives = 89/116 (76%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTC++ RF+ F +TIG+DF IKTVE++ ++IKLQIWDT
Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQIWDT 65
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERF +IT SYYR A ++LVYDI+ +F+ ++ WLR I+E+A+ V R+L+G
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLG 121
Score = 121 (47.7 bits), Expect = 4.7e-39, Sum P(2) = 4.7e-39
Identities = 29/97 (29%), Positives = 53/97 (54%)
Query: 185 YLASLEGHSN-NIHCMAR-NKIDREDREIPTEV-GEDFAKRHDMYYLETSAKASDNVEKL 241
+L +++ H+N ++ M NK D ED+ + + GE A+ H + + ETSAKA+ N+EK
Sbjct: 103 WLRNIDEHANEDVERMLLGNKCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKA 162
Query: 242 FMQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKAC 278
F+ +A ++++K K + + +KK C
Sbjct: 163 FLTLAEDILQKTPVKEPDRENVDISTTGGGTGLKKCC 199
>RGD|1565263 [details] [associations]
symbol:Rab19 "RAB19, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:1565263 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 CTD:401409 OMA:RNSLHLY
OrthoDB:EOG4WQ13N EMBL:BC088443 IPI:IPI00200723
RefSeq:NP_001019497.1 UniGene:Rn.53184 ProteinModelPortal:Q5M7U5
PRIDE:Q5M7U5 Ensembl:ENSRNOT00000012280 GeneID:500088
KEGG:rno:500088 UCSC:RGD:1565263 InParanoid:Q5M7U5 NextBio:705052
Genevestigator:Q5M7U5 GermOnline:ENSRNOG00000009030 Uniprot:Q5M7U5
Length = 217
Score = 362 (132.5 bits), Expect = 9.4e-38, Sum P(2) = 9.4e-38
Identities = 62/123 (50%), Positives = 95/123 (77%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E+ +LFKV+L+G++ VGKTC+V+ F GV+ Q TIGVDF ++++EI+ +++K+Q+W
Sbjct: 12 ENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNK 131
Query: 122 SGL 124
S L
Sbjct: 132 SDL 134
Score = 74 (31.1 bits), Expect = 9.4e-38, Sum P(2) = 9.4e-38
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 191 GHSNNIHCMARNKIDR-EDREIPTEVGEDFAKRHDMY-YLETSAKASDNVEKLFMQIAAE 248
G +N + + NK D E R + E A+++ + LETSAK S N++++F+ +A E
Sbjct: 119 GAANLVIMLIGNKSDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESRNIDEVFVLMAKE 178
Query: 249 LMEK 252
L+ +
Sbjct: 179 LIAR 182
Score = 41 (19.5 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 144 LATALASDKTDLDEDEHVL---ACLL 166
L L +K+DL E HVL AC L
Sbjct: 123 LVIMLIGNKSDLWEKRHVLFEDACTL 148
>UNIPROTKB|Q3ZC27 [details] [associations]
symbol:RAB19 "Ras-related protein Rab-19" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 EMBL:BC102961
IPI:IPI00714195 RefSeq:NP_001030212.1 UniGene:Bt.49611
ProteinModelPortal:Q3ZC27 PRIDE:Q3ZC27 Ensembl:ENSBTAT00000016258
GeneID:506911 KEGG:bta:506911 CTD:401409 InParanoid:Q3ZC27
OMA:RNSLHLY OrthoDB:EOG4WQ13N NextBio:20867797 Uniprot:Q3ZC27
Length = 217
Score = 358 (131.1 bits), Expect = 9.9e-38, Sum P(2) = 9.9e-38
Identities = 60/123 (48%), Positives = 94/123 (76%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK++L+G++ VGKTC+V+ F GV+ Q TIGVDF ++ +EI+ +++K+Q+W
Sbjct: 12 ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYMEAQQNTIGVDFTVRALEIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNK 131
Query: 122 SGL 124
L
Sbjct: 132 CDL 134
Score = 78 (32.5 bits), Expect = 9.9e-38, Sum P(2) = 9.9e-38
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 191 GHSNNIHCMARNKIDR-EDREIPTEVGEDFAKRHDMY-YLETSAKASDNVEKLFMQIAAE 248
G +N + + NK D E R + E A+++ + LETSAK S N++++F+ +A E
Sbjct: 119 GAANLVIMLIGNKCDLWEKRHVLFEDACILAEKYGLLAVLETSAKESKNIDEVFVLMARE 178
Query: 249 LMEK 252
LM +
Sbjct: 179 LMAR 182
Score = 42 (19.8 bits), Expect = 5.9e-34, Sum P(2) = 5.9e-34
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 144 LATALASDKTDLDEDEHVL---ACLL 166
L L +K DL E HVL AC+L
Sbjct: 123 LVIMLIGNKCDLWEKRHVLFEDACIL 148
>ASPGD|ASPL0000016908 [details] [associations]
symbol:srgB species:162425 "Emericella nidulans"
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IEA] [GO:0070317 "negative regulation of G0 to G1
transition" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
EMBL:BN001302 HOGENOM:HOG000233968 OMA:NRVGPPS
ProteinModelPortal:C8V3Z5 SMR:C8V3Z5 EnsemblFungi:CADANIAT00004373
Uniprot:C8V3Z5
Length = 201
Score = 341 (125.1 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 60/123 (48%), Positives = 92/123 (74%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH + +VYD++ +F+ + WL+EI+ YA+ V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKS 123
Query: 123 GLK 125
++
Sbjct: 124 DME 126
Score = 95 (38.5 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 202 NKIDREDREIPT-EVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA-----E 255
NK D ED+++ V ++FA + +LETSAK + NVE+ F+ +A ++ E++
Sbjct: 121 NKSDMEDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTATVNN 180
Query: 256 KLTIMHDRGVGM 267
K T+ +G G+
Sbjct: 181 KPTVQVGQGQGV 192
>MGI|MGI:2443284 [details] [associations]
symbol:Rab26 "RAB26, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0017157 "regulation of exocytosis" evidence=ISO] [GO:0019002
"GMP binding" evidence=ISO] [GO:0031226 "intrinsic to plasma
membrane" evidence=ISO] [GO:0035272 "exocrine system development"
evidence=ISO] [GO:0043001 "Golgi to plasma membrane protein
transport" evidence=ISO] [GO:0045055 "regulated secretory pathway"
evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:2443284 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0000139 GO:GO:0031226 PROSITE:PS51419 GO:GO:0030667
GO:GO:0043001 eggNOG:COG1100 GO:GO:0045055 HOVERGEN:HBG009351
GO:GO:0017157 GO:GO:0019002 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104031 CTD:25837 KO:K07913 GO:GO:0035272
ChiTaRS:RAB26 EMBL:BC094931 IPI:IPI00671283 RefSeq:NP_796349.1
UniGene:Mm.266033 ProteinModelPortal:Q504M8 SMR:Q504M8
STRING:Q504M8 PhosphoSite:Q504M8 PaxDb:Q504M8 PRIDE:Q504M8
Ensembl:ENSMUST00000035797 GeneID:328778 KEGG:mmu:328778
InParanoid:Q504M8 NextBio:398424 Bgee:Q504M8 CleanEx:MM_RAB26
Genevestigator:Q504M8 GermOnline:ENSMUSG00000052752 Uniprot:Q504M8
Length = 260
Score = 336 (123.3 bits), Expect = 1.6e-37, Sum P(2) = 1.6e-37
Identities = 63/117 (53%), Positives = 88/117 (75%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQG-ATIGVDFMIKTVEINNERIKLQIWD 62
Y FKV+LVG++GVGKTCL+ RF G F G +T+G+DF K ++++ ++KLQIWD
Sbjct: 64 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWD 123
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFRS+T +YYR AHAL+L+YDI+ + +FD + WL EI+EYA V+ +L+G
Sbjct: 124 TAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLG 180
Score = 99 (39.9 bits), Expect = 1.6e-37, Sum P(2) = 1.6e-37
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 202 NKIDR-EDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAE 255
NK+D +DR + E GE AK + + ++ETSA+ NV+ F IA EL ++ A+
Sbjct: 181 NKVDSTQDRVVKREDGEKLAKEYGLPFMETSARTGLNVDLAFTAIAKELKQRSAK 235
>UNIPROTKB|E2RRA2 [details] [associations]
symbol:RAB19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104044 CTD:401409 OMA:RNSLHLY
EMBL:AAEX03010214 RefSeq:XP_539883.1 ProteinModelPortal:E2RRA2
Ensembl:ENSCAFT00000006357 GeneID:482767 KEGG:cfa:482767
NextBio:20857291 Uniprot:E2RRA2
Length = 217
Score = 358 (131.1 bits), Expect = 2.0e-37, Sum P(2) = 2.0e-37
Identities = 60/123 (48%), Positives = 95/123 (77%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK++L+G++ VGKTC+V+ F GV+ Q TIGVDF ++++EI+ +++K+Q+W
Sbjct: 12 ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLEIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNK 131
Query: 122 SGL 124
L
Sbjct: 132 CDL 134
Score = 75 (31.5 bits), Expect = 2.0e-37, Sum P(2) = 2.0e-37
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 191 GHSNNIHCMARNKIDR-EDREIPTEVGEDFAKRHDMY-YLETSAKASDNVEKLFMQIAAE 248
G +N + + NK D E R + E A+++ + LETSAK S NV+++F +A E
Sbjct: 119 GAANLVIMLIGNKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNVDEVFTLMARE 178
Query: 249 LMEK 252
L+ +
Sbjct: 179 LIAR 182
Score = 43 (20.2 bits), Expect = 4.6e-34, Sum P(2) = 4.6e-34
Identities = 21/72 (29%), Positives = 33/72 (45%)
Query: 144 LATALASDKTDLDEDEHVL---ACLL-----MVFVAVCIPKLARN-EACFYLASLEGHS- 193
L L +K DL E HVL AC L ++ V K ++N + F L + E +
Sbjct: 123 LVIMLIGNKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNVDEVFTLMARELIAR 182
Query: 194 NNIHCMARNKID 205
N++H + +D
Sbjct: 183 NSLHLLGERTLD 194
>UNIPROTKB|E1C0Q9 [details] [associations]
symbol:RAB26 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104031 OMA:PSEPRFR
EMBL:AADN02023658 EMBL:AADN02023659 IPI:IPI00820336
ProteinModelPortal:E1C0Q9 Ensembl:ENSGALT00000040425
NextBio:20819995 Uniprot:E1C0Q9
Length = 253
Score = 334 (122.6 bits), Expect = 2.1e-37, Sum P(2) = 2.1e-37
Identities = 63/119 (52%), Positives = 87/119 (73%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQG-ATIGVDFMIKTVEINNERIKLQI 60
E Y FKV+LVG++GVGKTCL+ RF G F G +T+G+DF K + ++ ++KLQI
Sbjct: 55 EFYDLAFKVMLVGDSGVGKTCLLVRFKDGAFLAGSFISTVGIDFRNKVLTVDGVKVKLQI 114
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAGQERFRS+T +YYR AHAL+L+YD++ + +FD + WL EI EYA V+ +L+G
Sbjct: 115 WDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQQDVVLMLLG 173
Score = 100 (40.3 bits), Expect = 2.1e-37, Sum P(2) = 2.1e-37
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 202 NKIDR-EDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
NK+D +DR + E GE AK + + ++ETSAK+ NVE F IA EL +
Sbjct: 174 NKVDSAQDRVVKREDGEKLAKEYGVPFMETSAKSGLNVELAFTAIAKELKHR 225
>RGD|620890 [details] [associations]
symbol:Rab26 "RAB26, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=ISO;ISS]
[GO:0003924 "GTPase activity" evidence=TAS] [GO:0005525 "GTP
binding" evidence=IEA;ISO;IDA;TAS] [GO:0006184 "GTP catabolic
process" evidence=TAS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0017157 "regulation of exocytosis" evidence=IDA]
[GO:0019002 "GMP binding" evidence=ISO;ISS] [GO:0030658 "transport
vesicle membrane" evidence=IEA] [GO:0030667 "secretory granule
membrane" evidence=ISS] [GO:0031226 "intrinsic to plasma membrane"
evidence=IDA] [GO:0035272 "exocrine system development"
evidence=ISO;IDA] [GO:0043001 "Golgi to plasma membrane protein
transport" evidence=ISO;ISS] [GO:0045055 "regulated secretory
pathway" evidence=ISO;ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:620890 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0000139 GO:GO:0003924 GO:GO:0031226 PROSITE:PS51419
GO:GO:0030667 GO:GO:0043001 eggNOG:COG1100 GO:GO:0045055
HOVERGEN:HBG009351 GO:GO:0017157 GO:GO:0019002 HOGENOM:HOG000233968
CTD:25837 KO:K07913 GO:GO:0035272 EMBL:BC061984 EMBL:U18771
IPI:IPI00199248 PIR:JC2528 RefSeq:NP_598264.1 UniGene:Rn.10975
ProteinModelPortal:P51156 SMR:P51156 PhosphoSite:P51156
PRIDE:P51156 GeneID:171111 KEGG:rno:171111 UCSC:RGD:620890
NextBio:621820 ArrayExpress:P51156 Genevestigator:P51156
GermOnline:ENSRNOG00000003131 Uniprot:P51156
Length = 257
Score = 336 (123.3 bits), Expect = 3.4e-37, Sum P(2) = 3.4e-37
Identities = 63/117 (53%), Positives = 88/117 (75%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQG-ATIGVDFMIKTVEINNERIKLQIWD 62
Y FKV+LVG++GVGKTCL+ RF G F G +T+G+DF K ++++ ++KLQIWD
Sbjct: 61 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWD 120
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFRS+T +YYR AHAL+L+YDI+ + +FD + WL EI+EYA V+ +L+G
Sbjct: 121 TAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLG 177
Score = 96 (38.9 bits), Expect = 3.4e-37, Sum P(2) = 3.4e-37
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 202 NKIDR-EDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
NK+D ++R + E GE AK + + ++ETSAK+ NV+ F IA EL ++
Sbjct: 178 NKVDSTQERVVKREDGEKLAKEYGLPFMETSAKSGLNVDLAFTAIAKELKQR 229
>UNIPROTKB|P51156 [details] [associations]
symbol:Rab26 "Ras-related protein Rab-26" species:10116
"Rattus norvegicus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:620890 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0000139 GO:GO:0003924 GO:GO:0031226 PROSITE:PS51419
GO:GO:0030667 GO:GO:0043001 eggNOG:COG1100 GO:GO:0045055
HOVERGEN:HBG009351 GO:GO:0017157 GO:GO:0019002 HOGENOM:HOG000233968
CTD:25837 KO:K07913 GO:GO:0035272 EMBL:BC061984 EMBL:U18771
IPI:IPI00199248 PIR:JC2528 RefSeq:NP_598264.1 UniGene:Rn.10975
ProteinModelPortal:P51156 SMR:P51156 PhosphoSite:P51156
PRIDE:P51156 GeneID:171111 KEGG:rno:171111 UCSC:RGD:620890
NextBio:621820 ArrayExpress:P51156 Genevestigator:P51156
GermOnline:ENSRNOG00000003131 Uniprot:P51156
Length = 257
Score = 336 (123.3 bits), Expect = 3.4e-37, Sum P(2) = 3.4e-37
Identities = 63/117 (53%), Positives = 88/117 (75%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQG-ATIGVDFMIKTVEINNERIKLQIWD 62
Y FKV+LVG++GVGKTCL+ RF G F G +T+G+DF K ++++ ++KLQIWD
Sbjct: 61 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWD 120
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFRS+T +YYR AHAL+L+YDI+ + +FD + WL EI+EYA V+ +L+G
Sbjct: 121 TAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLG 177
Score = 96 (38.9 bits), Expect = 3.4e-37, Sum P(2) = 3.4e-37
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 202 NKIDR-EDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
NK+D ++R + E GE AK + + ++ETSAK+ NV+ F IA EL ++
Sbjct: 178 NKVDSTQERVVKREDGEKLAKEYGLPFMETSAKSGLNVDLAFTAIAKELKQR 229
>UNIPROTKB|E2R2R0 [details] [associations]
symbol:RAB26 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104031 CTD:25837 KO:K07913 OMA:PSEPRFR
EMBL:AAEX03004625 RefSeq:XP_853648.1 UniGene:Cfa.19357
Ensembl:ENSCAFT00000030833 GeneID:610958 KEGG:cfa:610958
NextBio:20896503 Uniprot:E2R2R0
Length = 244
Score = 338 (124.0 bits), Expect = 5.3e-37, Sum P(2) = 5.3e-37
Identities = 62/117 (52%), Positives = 88/117 (75%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQG-ATIGVDFMIKTVEINNERIKLQIWD 62
Y FKV+LVG++GVGKTCL+ RF G F G +T+G+DF K ++++ ++KLQIWD
Sbjct: 48 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQIWD 107
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFRS+T +YYR AHAL+L+YD++ + +FD + WL EI+EYA V+ +L+G
Sbjct: 108 TAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIQEYAQHNVVLMLLG 164
Score = 92 (37.4 bits), Expect = 5.3e-37, Sum P(2) = 5.3e-37
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 194 NNIHCMARNKIDR-EDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
N + + NK+D ++R + + GE AK + + ++ETSAK NV+ F IA EL ++
Sbjct: 157 NVVLMLLGNKVDSAQERVVKRKDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKQR 216
>UNIPROTKB|F1RFB0 [details] [associations]
symbol:LOC100739113 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104031 KO:K07913 EMBL:FP102909
RefSeq:XP_003124780.1 RefSeq:XP_003481158.1 UniGene:Ssc.2116
Ensembl:ENSSSCT00000008813 GeneID:100516791 GeneID:100739113
KEGG:ssc:100516791 KEGG:ssc:100739113 OMA:PATHGSQ Uniprot:F1RFB0
Length = 256
Score = 336 (123.3 bits), Expect = 6.9e-37, Sum P(2) = 6.9e-37
Identities = 62/117 (52%), Positives = 88/117 (75%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQG-ATIGVDFMIKTVEINNERIKLQIWD 62
Y FKV+LVG++GVGKTCL+ RF G F G +T+G+DF K ++++ ++KLQIWD
Sbjct: 60 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKILDVDGMKVKLQIWD 119
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFRS+T +YYR AHAL+L+YD++ + +FD + WL EI+EYA V+ +L+G
Sbjct: 120 TAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEYAQRDVVLLLLG 176
Score = 93 (37.8 bits), Expect = 6.9e-37, Sum P(2) = 6.9e-37
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 202 NKIDR-EDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAE 255
NK+D ++R + E GE AK + ++ETSA+ NV+ F +A EL ++L +
Sbjct: 177 NKVDSAQERVVRREDGEQLAKEFGLPFMETSARTGLNVDLAFTAVAKELKQRLTK 231
>UNIPROTKB|F1P278 [details] [associations]
symbol:RAB19 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104044 OMA:RNSLHLY
EMBL:AADN02006362 IPI:IPI00604193 Ensembl:ENSGALT00000020960
Uniprot:F1P278
Length = 212
Score = 348 (127.6 bits), Expect = 7.7e-37, Sum P(2) = 7.7e-37
Identities = 58/119 (48%), Positives = 91/119 (76%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
+ +LFK++L+G++ VGKTC+V RF G F Q TIGVDF +++++I+ +++K+Q+WDT
Sbjct: 10 FDYLFKIILIGDSNVGKTCVVHRFKTGQFYEKQQNTIGVDFTVRSMDIDGKKVKIQVWDT 69
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
AGQERFR+ITQSYYRSAH IL YD++ + TF+ + W+ E+E+Y + ++ +L+G S
Sbjct: 70 AGQERFRTITQSYYRSAHGAILAYDLTRRSTFESIPHWVHEVEKYGAANLVMMLIGNKS 128
Score = 80 (33.2 bits), Expect = 7.7e-37, Sum P(2) = 7.7e-37
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 191 GHSNNIHCMARNKIDRED-REIPTEVGEDFAKRHDMY-YLETSAKASDNVEKLFMQIAAE 248
G +N + + NK D D R++ E A+++ + LETSAK + N+E++F+ +A E
Sbjct: 115 GAANLVMMLIGNKSDSVDKRQVLFEDACTLAEKYGLLAVLETSAKEAQNIEEVFVLMAKE 174
Query: 249 LMEK 252
L+ +
Sbjct: 175 LIAR 178
>ZFIN|ZDB-GENE-070822-21 [details] [associations]
symbol:zgc:171927 "zgc:171927" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-070822-21 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GeneTree:ENSGT00700000104049
EMBL:AL928851 IPI:IPI00858827 Ensembl:ENSDART00000004518
OMA:SKINSAP Bgee:F1RBB0 Uniprot:F1RBB0
Length = 210
Score = 350 (128.3 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 63/122 (51%), Positives = 90/122 (73%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEMEGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL EI+ YA V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEQESFNNVKQWLEEIDRYACENVSKLLVGNKS 123
Query: 123 GL 124
L
Sbjct: 124 DL 125
Score = 76 (31.8 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 202 NKIDREDREIPT-EVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKL 253
NK D +++ +F + + LETSAK ++NVEK F+ +A+E+ +++
Sbjct: 121 NKSDLSSKKVVDFTTAMEFTESLKIPLLETSAKNANNVEKAFLTMASEIQKRI 173
>RGD|620880 [details] [associations]
symbol:Rab13 "RAB13, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=ISO;ISS]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0005911 "cell-cell junction" evidence=ISO] [GO:0005923 "tight
junction" evidence=IEA;ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] Reactome:REACT_97881 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:620880 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005794 GO:GO:0007264 GO:GO:0015031
GO:GO:0005923 GO:GO:0030659 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:5872
GeneTree:ENSGT00700000104031 KO:K06109 OrthoDB:EOG4BVRVS
OMA:AMGIVLI EMBL:AF525280 EMBL:M83678 IPI:IPI00202697 PIR:D42148
RefSeq:NP_112354.1 UniGene:Rn.9819 ProteinModelPortal:P35286
SMR:P35286 IntAct:P35286 MINT:MINT-2982767 STRING:P35286
PhosphoSite:P35286 PRIDE:P35286 Ensembl:ENSRNOT00000022627
GeneID:81756 KEGG:rno:81756 UCSC:RGD:620880 InParanoid:P35286
NextBio:615526 Genevestigator:P35286 GermOnline:ENSRNOG00000016733
Uniprot:P35286
Length = 203
Score = 331 (121.6 bits), Expect = 3.1e-36, Sum P(2) = 3.1e-36
Identities = 62/116 (53%), Positives = 89/116 (76%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTCL+ RF + F +TIG+DF I+TVEI +RIKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERF++IT +YYR A +ILVYDI+ + +F+ + +W++ I+E AS V R+L+G
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120
Score = 92 (37.4 bits), Expect = 3.1e-36, Sum P(2) = 3.1e-36
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 202 NKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
NK D E R++ E E A+ H + + ETSAK+S NV++ F +A +++ K
Sbjct: 121 NKCDMEAKRKVQREQAERLAREHRIRFFETSAKSSVNVDEAFSSLARDILLK 172
>UNIPROTKB|Q9ULW5 [details] [associations]
symbol:RAB26 "Ras-related protein Rab-26" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0030658 "transport vesicle
membrane" evidence=IEA] [GO:0035272 "exocrine system development"
evidence=ISS;IMP] [GO:0005525 "GTP binding" evidence=ISS;IMP]
[GO:0031226 "intrinsic to plasma membrane" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0017157
"regulation of exocytosis" evidence=ISS] [GO:0000139 "Golgi
membrane" evidence=IDA] [GO:0043001 "Golgi to plasma membrane
protein transport" evidence=IMP] [GO:0045055 "regulated secretory
pathway" evidence=IMP] [GO:0030667 "secretory granule membrane"
evidence=ISS] [GO:0019002 "GMP binding" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139 EMBL:CH471112
GO:GO:0031226 PROSITE:PS51419 GO:GO:0030667 GO:GO:0043001
eggNOG:COG1100 EMBL:AC009065 GO:GO:0045055 HOVERGEN:HBG009351
GO:GO:0017157 GO:GO:0019002 HOGENOM:HOG000233968 CTD:25837
KO:K07913 OMA:PSEPRFR OrthoDB:EOG4VMFG9 GO:GO:0035272 EMBL:AY646153
EMBL:BC066913 EMBL:AB027137 EMBL:AF498952 IPI:IPI00419883
RefSeq:NP_055168.2 UniGene:Hs.3797 PDB:2G6B PDBsum:2G6B
ProteinModelPortal:Q9ULW5 SMR:Q9ULW5 IntAct:Q9ULW5 STRING:Q9ULW5
PhosphoSite:Q9ULW5 DMDM:134044256 PaxDb:Q9ULW5 PRIDE:Q9ULW5
DNASU:25837 Ensembl:ENST00000210187 GeneID:25837 KEGG:hsa:25837
UCSC:uc002cou.3 GeneCards:GC16P002190 HGNC:HGNC:14259 HPA:HPA050223
MIM:605455 neXtProt:NX_Q9ULW5 PharmGKB:PA34116 InParanoid:Q9ULW5
PhylomeDB:Q9ULW5 ChiTaRS:RAB26 EvolutionaryTrace:Q9ULW5
GenomeRNAi:25837 NextBio:47147 ArrayExpress:Q9ULW5 Bgee:Q9ULW5
CleanEx:HS_RAB26 Genevestigator:Q9ULW5 GermOnline:ENSG00000167964
Uniprot:Q9ULW5
Length = 256
Score = 330 (121.2 bits), Expect = 3.2e-36, Sum P(2) = 3.2e-36
Identities = 61/117 (52%), Positives = 86/117 (73%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQG-ATIGVDFMIKTVEINNERIKLQIWD 62
Y FKV+LVG++GVGKTCL+ RF G F G +T+G+DF K ++++ ++KLQ+WD
Sbjct: 60 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWD 119
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFRS+T +YYR AHAL+L+YD++ + +FD + WL EI EYA V +L+G
Sbjct: 120 TAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLG 176
Score = 93 (37.8 bits), Expect = 3.2e-36, Sum P(2) = 3.2e-36
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 202 NKIDR-EDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
NK+D +R + E GE AK + + ++ETSAK NV+ F IA EL ++
Sbjct: 177 NKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKQR 228
>SGD|S000001889 [details] [associations]
symbol:SEC4 "Rab family GTPase essential for exocytic
secretion and autophagy" species:4932 "Saccharomyces cerevisiae"
[GO:0007107 "membrane addition at site of cytokinesis"
evidence=IEP;IGI;IMP] [GO:0006914 "autophagy" evidence=IGI;IMP]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA;TAS] [GO:0007121 "bipolar cellular bud
site selection" evidence=TAS] [GO:0030478 "actin cap" evidence=TAS]
[GO:0030133 "transport vesicle" evidence=TAS] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006906 "vesicle fusion"
evidence=IMP] [GO:0006893 "Golgi to plasma membrane transport"
evidence=IMP] [GO:0005741 "mitochondrial outer membrane"
evidence=IDA] [GO:0006887 "exocytosis" evidence=IEA;IDA]
[GO:0031321 "ascospore-type prospore assembly" evidence=IMP]
[GO:0000131 "incipient cellular bud site" evidence=IDA] [GO:0000910
"cytokinesis" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0006810
"transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA;IDA] [GO:0030658 "transport vesicle membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 SGD:S000001889
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0005741 GO:GO:0015031 GO:GO:0003924 GO:GO:0006914 EMBL:D50617
EMBL:BK006940 GO:GO:0006887 PROSITE:PS51419 GO:GO:0030133
GO:GO:0030658 eggNOG:COG1100 GO:GO:0006893 GO:GO:0030478
GO:GO:0000131 GO:GO:0006906 GO:GO:0007121 GO:GO:0031321 PDB:3CPH
PDBsum:3CPH GO:GO:0007107 KO:K07976 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104031 OMA:AMGIVLI PDB:2EQB PDB:2OCY
PDBsum:2EQB PDBsum:2OCY EMBL:M16507 EMBL:AY692843 PIR:A25959
RefSeq:NP_116650.1 PDB:1G16 PDB:1G17 PDBsum:1G16 PDBsum:1G17
ProteinModelPortal:P07560 SMR:P07560 DIP:DIP-2492N IntAct:P07560
MINT:MINT-689902 STRING:P07560 PaxDb:P07560 PeptideAtlas:P07560
PRIDE:P07560 EnsemblFungi:YFL005W GeneID:850543 KEGG:sce:YFL005W
CYGD:YFL005w OrthoDB:EOG4X3M9K EvolutionaryTrace:P07560
NextBio:966307 Genevestigator:P07560 GermOnline:YFL005W
Uniprot:P07560
Length = 215
Score = 325 (119.5 bits), Expect = 3.3e-36, Sum P(2) = 3.3e-36
Identities = 58/124 (46%), Positives = 89/124 (71%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ Y + K++L+G++GVGK+CL+ RF + F P TIG+DF IKTV+IN +++KLQ+W
Sbjct: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+IT +YYR A +ILVYD++ + TF + W + + E+A+ + +LVG
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134
Query: 122 SGLK 125
S ++
Sbjct: 135 SDME 138
Score = 98 (39.6 bits), Expect = 3.3e-36, Sum P(2) = 3.3e-36
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 202 NKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKL-AEKL 257
NK D E R + + GE AK + ++E+SAK DNV ++F +A + EK+ + KL
Sbjct: 133 NKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKL 189
>ZFIN|ZDB-GENE-040801-185 [details] [associations]
symbol:rab18b "RAB18B, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0007420
"brain development" evidence=IMP] [GO:0001654 "eye development"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0006810 "transport" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-040801-185 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0007420 GO:GO:0015031 GO:GO:0009790
PROSITE:PS51419 eggNOG:COG1100 InterPro:IPR025662 GO:GO:0001654
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 KO:K07910 OrthoDB:EOG4VT5Z6
OMA:FAKRHRT EMBL:BC076054 IPI:IPI00506933 RefSeq:NP_001003449.1
UniGene:Dr.79683 ProteinModelPortal:Q6DHC1 SMR:Q6DHC1 STRING:Q6DHC1
PRIDE:Q6DHC1 Ensembl:ENSDART00000042737 GeneID:445055
KEGG:dre:445055 CTD:445055 InParanoid:Q6DHC1 NextBio:20831818
Bgee:Q6DHC1 Uniprot:Q6DHC1
Length = 205
Score = 311 (114.5 bits), Expect = 3.8e-36, Sum P(2) = 3.8e-36
Identities = 59/119 (49%), Positives = 83/119 (69%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+D K++++G +GVGK+ L+ RFT F P ATIGVDF +KT+ I+ R KL IW
Sbjct: 3 DDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFK-VLRVLVG 119
DTAGQERFR++T SYYR A +ILVYD++ + TF L +WL E+E Y + ++++LVG
Sbjct: 63 DTAGQERFRTLTPSYYRGAQGVILVYDVTKRDTFTKLENWLNELETYCTRNDLVKMLVG 121
Score = 112 (44.5 bits), Expect = 3.8e-36, Sum P(2) = 3.8e-36
Identities = 23/84 (27%), Positives = 45/84 (53%)
Query: 196 IHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAE 255
+ + NKID+++RE+ G FA++H M ++E SAK D V+ F ++ ++++
Sbjct: 116 VKMLVGNKIDKDNREVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGL 175
Query: 256 KLTIMHDRGVGMLTRIYNIKKACG 279
+ + + GV + + ACG
Sbjct: 176 WESSIQNHGVQLSDNEPQRQGACG 199
>MGI|MGI:1927232 [details] [associations]
symbol:Rab13 "RAB13, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0005525 "GTP binding" evidence=ISO] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IDA]
[GO:0005923 "tight junction" evidence=IDA] [GO:0006184 "GTP
catabolic process" evidence=TAS] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=TAS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=TAS] [GO:0019897
"extrinsic to plasma membrane" evidence=TAS] [GO:0030054 "cell
junction" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:1927232 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
Reactome:REACT_147847 GO:GO:0006886 GO:GO:0007264 GO:GO:0003924
GO:GO:0019897 GO:GO:0016023 GO:GO:0005923 GO:GO:0030659
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 CTD:5872 GeneTree:ENSGT00700000104031
KO:K06109 OrthoDB:EOG4BVRVS OMA:AMGIVLI EMBL:AK002303 EMBL:BC027214
IPI:IPI00121183 RefSeq:NP_080953.1 UniGene:Mm.29355
ProteinModelPortal:Q9DD03 SMR:Q9DD03 MINT:MINT-1340848
STRING:Q9DD03 PhosphoSite:Q9DD03 PaxDb:Q9DD03 PRIDE:Q9DD03
Ensembl:ENSMUST00000065418 GeneID:68328 KEGG:mmu:68328
UCSC:uc008qbn.1 InParanoid:Q9DD03 NextBio:327005 Bgee:Q9DD03
CleanEx:MM_RAB13 Genevestigator:Q9DD03
GermOnline:ENSMUSG00000027935 Uniprot:Q9DD03
Length = 202
Score = 328 (120.5 bits), Expect = 4.1e-36, Sum P(2) = 4.1e-36
Identities = 61/116 (52%), Positives = 89/116 (76%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTCL+ RF + F +TIG+DF I+TV+I +RIKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERF++IT +YYR A +ILVYDI+ + +F+ + +W++ I+E AS V R+L+G
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120
Score = 94 (38.1 bits), Expect = 4.1e-36, Sum P(2) = 4.1e-36
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 202 NKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
NK D E R++ E E A+ H + + ETSAK+S NV++ F +A +++ K
Sbjct: 121 NKCDMEAKRQVQREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDILLK 172
>ZFIN|ZDB-GENE-040718-2 [details] [associations]
symbol:rab15 "RAB15, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040718-2 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104031 CTD:376267 KO:K07908 OMA:HNITETF
OrthoDB:EOG4HDSVG EMBL:BX255891 EMBL:BC075754 IPI:IPI00489491
RefSeq:NP_001002318.1 UniGene:Dr.84043 Ensembl:ENSDART00000049462
GeneID:436590 KEGG:dre:436590 InParanoid:Q6DI36 NextBio:20831039
Uniprot:Q6DI36
Length = 212
Score = 335 (123.0 bits), Expect = 4.8e-36, Sum P(2) = 4.8e-36
Identities = 61/134 (45%), Positives = 95/134 (70%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ Y LF+++L+G++GVGKTCL+ RFT F P +TIGVDF +KT+EI+ ++++QIW
Sbjct: 3 KQYDVLFRLLLLGDSGVGKTCLLCRFTDNEFHPSHISTIGVDFKMKTLEIDGIKVRIQIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQER+++IT+ YYR A + LVYDI+ + +F + W +++EYA KV ++LVG
Sbjct: 63 DTAGQERYQTITKQYYRRAQGIFLVYDITSERSFQHIMKWASDVDEYAPEKVQKILVGNK 122
Query: 122 SGLKIVNEMASAAG 135
S + ++A+ G
Sbjct: 123 SDEQEKRQVATEQG 136
Score = 86 (35.3 bits), Expect = 4.8e-36, Sum P(2) = 4.8e-36
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 202 NKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK D +E R++ TE G+ AK + M + ETSA + N+ + F ++A +++ + L ++
Sbjct: 121 NKSDEQEKRQVATEQGDKLAKAYGMDFFETSAFTNHNITESFTRLAELVLQANKKDLDLL 180
>UNIPROTKB|Q5KTJ6 [details] [associations]
symbol:RAB13 "Ras-related protein Rab-13" species:10036
"Mesocricetus auratus" [GO:0005525 "GTP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0005923 GO:GO:0030659 PROSITE:PS51419 HOVERGEN:HBG009351
HSSP:P55258 EMBL:AB158369 ProteinModelPortal:Q5KTJ6 SMR:Q5KTJ6
PRIDE:Q5KTJ6 Uniprot:Q5KTJ6
Length = 203
Score = 332 (121.9 bits), Expect = 5.0e-36, Sum P(2) = 5.0e-36
Identities = 65/132 (49%), Positives = 95/132 (71%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTCL+ RF + F +TIG+DF I+TVEI +RIKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERF++IT +YYR A +ILVYDI+ + +F+ + +W++ I+E AS V R+L+G
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 124 L----KIVNEMA 131
+ K++ E A
Sbjct: 125 MEAKRKVLKEQA 136
Score = 89 (36.4 bits), Expect = 5.0e-36, Sum P(2) = 5.0e-36
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 202 NKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK D E R++ E + A+ H + + ETSAK+S NV++ F +A +++ K + +
Sbjct: 121 NKCDMEAKRKVLKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDILLKSGGRRSGN 180
Query: 261 HDR 263
H +
Sbjct: 181 HSK 183
>RGD|1565300 [details] [associations]
symbol:Rab43 "RAB43, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity" evidence=ISO;ISS]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISO;ISS] [GO:0006184 "GTP catabolic process"
evidence=ISO;ISS] [GO:0007030 "Golgi organization"
evidence=ISO;ISS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0035526 "retrograde transport, plasma membrane to
Golgi" evidence=ISO;ISS] [GO:0045335 "phagocytic vesicle"
evidence=ISO;ISS] [GO:0090382 "phagosome maturation"
evidence=ISO;ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:1565300 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 OrthoDB:EOG4WQ13N CTD:339122 KO:K07930
OMA:LIGDCGT EMBL:AY593256 IPI:IPI00204737 RefSeq:NP_001019502.1
UniGene:Rn.141443 ProteinModelPortal:Q53B90 SMR:Q53B90 PRIDE:Q53B90
Ensembl:ENSRNOT00000013299 GeneID:500249 KEGG:rno:500249
UCSC:RGD:1565300 InParanoid:Q53B90 NextBio:705573
Genevestigator:Q53B90 GermOnline:ENSRNOG00000037768 Uniprot:Q53B90
Length = 210
Score = 395 (144.1 bits), Expect = 5.0e-36, P = 5.0e-36
Identities = 82/160 (51%), Positives = 112/160 (70%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 11 EHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIW 70
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDIS + TF + W+ ++ +YA ++++L+G
Sbjct: 71 DTAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNK 130
Query: 122 SGLKIVNE--MASAAGLLCTVDP--ALATALASDKTDLDE 157
S L + E +A A L D A+ T+ A D ++++E
Sbjct: 131 SDLADLREVPLAEAQSLAEHYDILCAIETS-AKDSSNVEE 169
>UNIPROTKB|Q5ZLG1 [details] [associations]
symbol:RAB18 "Ras-related protein Rab-18" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0001654 "eye development"
evidence=ISS] [GO:0007420 "brain development" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0007420 GO:GO:0015031 GO:GO:0005622 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0019003 InterPro:IPR025662 GO:GO:0001654
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 KO:K07910 OMA:LETYTTR
OrthoDB:EOG4VT5Z6 EMBL:AJ719773 IPI:IPI00577245
RefSeq:NP_001006355.1 UniGene:Gga.42447 ProteinModelPortal:Q5ZLG1
SMR:Q5ZLG1 IntAct:Q5ZLG1 PRIDE:Q5ZLG1 Ensembl:ENSGALT00000012033
GeneID:420483 KEGG:gga:420483 CTD:22931 InParanoid:Q5ZLG1
NextBio:20823383 Uniprot:Q5ZLG1
Length = 206
Score = 311 (114.5 bits), Expect = 6.2e-36, Sum P(2) = 6.2e-36
Identities = 58/119 (48%), Positives = 83/119 (69%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
ED K++++G +GVGK+ L+ RFT F P ATIGVDF +KT+ ++ + KL IW
Sbjct: 3 EDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFK-VLRVLVG 119
DTAGQERFR++T SYYR A +ILVYD++ + TF L +WL E+E Y + ++++LVG
Sbjct: 63 DTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVKMLVG 121
Score = 110 (43.8 bits), Expect = 6.2e-36, Sum P(2) = 6.2e-36
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 196 IHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELME 251
+ + NKID+E+RE+ G FA++H M ++E SAK D V+ F ++ ++++
Sbjct: 116 VKMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQ 171
>UNIPROTKB|Q0IIG8 [details] [associations]
symbol:RAB18 "Ras-related protein Rab-18" species:9913 "Bos
taurus" [GO:0019003 "GDP binding" evidence=ISS] [GO:0007420 "brain
development" evidence=ISS] [GO:0001654 "eye development"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0007420 GO:GO:0015031 GO:GO:0005622 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0019003 InterPro:IPR025662 GO:GO:0001654
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:BC122650
IPI:IPI00691826 RefSeq:NP_001068967.1 UniGene:Bt.111463
ProteinModelPortal:Q0IIG8 SMR:Q0IIG8 STRING:Q0IIG8 PRIDE:Q0IIG8
Ensembl:ENSBTAT00000013018 GeneID:511160 KEGG:bta:511160
GeneTree:ENSGT00700000104044 InParanoid:Q0IIG8 KO:K07910
OMA:LETYTTR OrthoDB:EOG4VT5Z6 NextBio:20869801 Uniprot:Q0IIG8
Length = 206
Score = 309 (113.8 bits), Expect = 6.3e-36, Sum P(2) = 6.3e-36
Identities = 58/119 (48%), Positives = 82/119 (68%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
ED K++++G +GVGK+ L+ RFT F P ATIGVDF +KT+ ++ + KL IW
Sbjct: 3 EDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFK-VLRVLVG 119
DTAGQERFR++T SYYR A +ILVYD++ + TF L +WL E+E Y + ++ +LVG
Sbjct: 63 DTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVG 121
Score = 112 (44.5 bits), Expect = 6.3e-36, Sum P(2) = 6.3e-36
Identities = 19/56 (33%), Positives = 36/56 (64%)
Query: 196 IHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELME 251
++ + NKID+E+RE+ G FA++H M ++E SAK D V+ F ++ ++++
Sbjct: 116 VNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQ 171
>UNIPROTKB|Q9NP72 [details] [associations]
symbol:RAB18 "Ras-related protein Rab-18" species:9606
"Homo sapiens" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0006897 "endocytosis" evidence=NAS] [GO:0007264 "small GTPase
mediated signal transduction" evidence=NAS] [GO:0001654 "eye
development" evidence=ISS] [GO:0007420 "brain development"
evidence=ISS] [GO:0019003 "GDP binding" evidence=IDA] [GO:0005622
"intracellular" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=NAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0007420 GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0005622 EMBL:CH471072 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 InterPro:IPR025662 GO:GO:0001654 HOVERGEN:HBG009351
HOGENOM:HOG000233968 KO:K07910 OMA:LETYTTR OrthoDB:EOG4VT5Z6
CTD:22931 EMBL:AJ277145 EMBL:AJ277146 EMBL:AJ277147 EMBL:AJ277148
EMBL:AJ277149 EMBL:AF137372 EMBL:AY574034 EMBL:AF087860
EMBL:AF498950 EMBL:AF136974 EMBL:AL136734 EMBL:BT009840
EMBL:CR533455 EMBL:AK001555 EMBL:AK295443 EMBL:AK223153
EMBL:AL138920 EMBL:BC015014 EMBL:BC029350 IPI:IPI00014577
IPI:IPI00844361 IPI:IPI00922800 RefSeq:NP_001243339.1
RefSeq:NP_001243340.1 RefSeq:NP_001243341.1 RefSeq:NP_001243344.1
RefSeq:NP_067075.1 UniGene:Hs.406799 PDB:1X3S PDBsum:1X3S
ProteinModelPortal:Q9NP72 SMR:Q9NP72 IntAct:Q9NP72 STRING:Q9NP72
PhosphoSite:Q9NP72 DMDM:12230528 PaxDb:Q9NP72 PRIDE:Q9NP72
DNASU:22931 Ensembl:ENST00000356940 Ensembl:ENST00000535776
GeneID:22931 KEGG:hsa:22931 UCSC:uc001itv.3 GeneCards:GC10P027793
HGNC:HGNC:14244 HPA:HPA025928 MIM:602207 MIM:614222
neXtProt:NX_Q9NP72 Orphanet:2510 PharmGKB:PA34106 PhylomeDB:Q9NP72
ChiTaRS:RAB18 EvolutionaryTrace:Q9NP72 GenomeRNAi:22931
NextBio:43659 ArrayExpress:Q9NP72 Bgee:Q9NP72 CleanEx:HS_RAB18
Genevestigator:Q9NP72 GermOnline:ENSG00000099246 Uniprot:Q9NP72
Length = 206
Score = 309 (113.8 bits), Expect = 6.3e-36, Sum P(2) = 6.3e-36
Identities = 58/119 (48%), Positives = 82/119 (68%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
ED K++++G +GVGK+ L+ RFT F P ATIGVDF +KT+ ++ + KL IW
Sbjct: 3 EDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFK-VLRVLVG 119
DTAGQERFR++T SYYR A +ILVYD++ + TF L +WL E+E Y + ++ +LVG
Sbjct: 63 DTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVG 121
Score = 112 (44.5 bits), Expect = 6.3e-36, Sum P(2) = 6.3e-36
Identities = 19/56 (33%), Positives = 36/56 (64%)
Query: 196 IHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELME 251
++ + NKID+E+RE+ G FA++H M ++E SAK D V+ F ++ ++++
Sbjct: 116 VNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQ 171
>UNIPROTKB|I3LC07 [details] [associations]
symbol:RAB18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0005622 InterPro:IPR025662 PROSITE:PS00675
GeneTree:ENSGT00700000104044 KO:K07910 OMA:LETYTTR EMBL:FP476080
RefSeq:XP_003357800.1 ProteinModelPortal:I3LC07 SMR:I3LC07
PRIDE:I3LC07 Ensembl:ENSSSCT00000024844 GeneID:100620478
KEGG:ssc:100620478 Uniprot:I3LC07
Length = 206
Score = 309 (113.8 bits), Expect = 6.3e-36, Sum P(2) = 6.3e-36
Identities = 58/119 (48%), Positives = 82/119 (68%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
ED K++++G +GVGK+ L+ RFT F P ATIGVDF +KT+ ++ + KL IW
Sbjct: 3 EDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFK-VLRVLVG 119
DTAGQERFR++T SYYR A +ILVYD++ + TF L +WL E+E Y + ++ +LVG
Sbjct: 63 DTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVG 121
Score = 112 (44.5 bits), Expect = 6.3e-36, Sum P(2) = 6.3e-36
Identities = 19/56 (33%), Positives = 36/56 (64%)
Query: 196 IHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELME 251
++ + NKID+E+RE+ G FA++H M ++E SAK D V+ F ++ ++++
Sbjct: 116 VNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQ 171
>UNIPROTKB|Q5R5H5 [details] [associations]
symbol:RAB18 "Ras-related protein Rab-18" species:9601
"Pongo abelii" [GO:0001654 "eye development" evidence=ISS]
[GO:0007420 "brain development" evidence=ISS] [GO:0019003 "GDP
binding" evidence=ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0007420
GO:GO:0015031 GO:GO:0005622 PROSITE:PS51419 GO:GO:0019003
InterPro:IPR025662 GO:GO:0001654 HOVERGEN:HBG009351
GeneTree:ENSGT00700000104044 KO:K07910 OMA:LETYTTR CTD:22931
EMBL:CR860884 RefSeq:NP_001127616.1 UniGene:Pab.18063
ProteinModelPortal:Q5R5H5 SMR:Q5R5H5 PRIDE:Q5R5H5
Ensembl:ENSPPYT00000002604 GeneID:100174695 KEGG:pon:100174695
InParanoid:Q5R5H5 Uniprot:Q5R5H5
Length = 206
Score = 309 (113.8 bits), Expect = 6.3e-36, Sum P(2) = 6.3e-36
Identities = 58/119 (48%), Positives = 82/119 (68%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
ED K++++G +GVGK+ L+ RFT F P ATIGVDF +KT+ ++ + KL IW
Sbjct: 3 EDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFK-VLRVLVG 119
DTAGQERFR++T SYYR A +ILVYD++ + TF L +WL E+E Y + ++ +LVG
Sbjct: 63 DTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVG 121
Score = 112 (44.5 bits), Expect = 6.3e-36, Sum P(2) = 6.3e-36
Identities = 19/56 (33%), Positives = 36/56 (64%)
Query: 196 IHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELME 251
++ + NKID+E+RE+ G FA++H M ++E SAK D V+ F ++ ++++
Sbjct: 116 VNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQ 171
>MGI|MGI:102790 [details] [associations]
symbol:Rab18 "RAB18, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:102790 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0007420 GO:GO:0015031 GO:GO:0016324 GO:GO:0005622
PROSITE:PS51419 GO:GO:0009925 eggNOG:COG1100 GO:GO:0019003
InterPro:IPR025662 GO:GO:0001654 HOVERGEN:HBG009351
HOGENOM:HOG000233968 KO:K07910 OMA:LETYTTR OrthoDB:EOG4VT5Z6
CTD:22931 EMBL:X80333 EMBL:L04966 EMBL:AK045514 EMBL:AK140901
EMBL:AK143673 EMBL:AK146177 EMBL:AK146397 EMBL:AK154920
EMBL:BC056351 EMBL:M79308 IPI:IPI00116770 PIR:JN0874
RefSeq:NP_851415.1 UniGene:Mm.132802 ProteinModelPortal:P35293
SMR:P35293 STRING:P35293 PhosphoSite:P35293 PaxDb:P35293
PRIDE:P35293 Ensembl:ENSMUST00000097680 GeneID:19330 KEGG:mmu:19330
InParanoid:P35293 NextBio:296305 Bgee:P35293 CleanEx:MM_RAB18
Genevestigator:P35293 GermOnline:ENSMUSG00000073639 Uniprot:P35293
Length = 206
Score = 309 (113.8 bits), Expect = 6.3e-36, Sum P(2) = 6.3e-36
Identities = 58/119 (48%), Positives = 82/119 (68%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
ED K++++G +GVGK+ L+ RFT F P ATIGVDF +KT+ ++ + KL IW
Sbjct: 3 EDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFK-VLRVLVG 119
DTAGQERFR++T SYYR A +ILVYD++ + TF L +WL E+E Y + ++ +LVG
Sbjct: 63 DTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVG 121
Score = 112 (44.5 bits), Expect = 6.3e-36, Sum P(2) = 6.3e-36
Identities = 19/56 (33%), Positives = 36/56 (64%)
Query: 196 IHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELME 251
++ + NKID+E+RE+ G FA++H M ++E SAK D V+ F ++ ++++
Sbjct: 116 VNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQ 171
>RGD|1308905 [details] [associations]
symbol:Rab18 "RAB18, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0001654 "eye development" evidence=ISS]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA;ISO] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007420 "brain development"
evidence=ISS] [GO:0015031 "protein transport" evidence=IEA]
[GO:0019003 "GDP binding" evidence=ISO;ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:1308905 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0007420 GO:GO:0015031 GO:GO:0005622
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003 InterPro:IPR025662
GO:GO:0001654 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 KO:K07910 OMA:LETYTTR
OrthoDB:EOG4VT5Z6 CTD:22931 EMBL:BC089957 IPI:IPI00198316
RefSeq:NP_001012486.1 UniGene:Rn.221766 ProteinModelPortal:Q5EB77
SMR:Q5EB77 IntAct:Q5EB77 STRING:Q5EB77 PRIDE:Q5EB77
Ensembl:ENSRNOT00000025828 GeneID:307039 KEGG:rno:307039
UCSC:RGD:1308905 InParanoid:Q5EB77 NextBio:656875
Genevestigator:Q5EB77 GermOnline:ENSRNOG00000018972 Uniprot:Q5EB77
Length = 206
Score = 309 (113.8 bits), Expect = 6.3e-36, Sum P(2) = 6.3e-36
Identities = 58/119 (48%), Positives = 82/119 (68%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
ED K++++G +GVGK+ L+ RFT F P ATIGVDF +KT+ ++ + KL IW
Sbjct: 3 EDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFK-VLRVLVG 119
DTAGQERFR++T SYYR A +ILVYD++ + TF L +WL E+E Y + ++ +LVG
Sbjct: 63 DTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVG 121
Score = 112 (44.5 bits), Expect = 6.3e-36, Sum P(2) = 6.3e-36
Identities = 19/56 (33%), Positives = 36/56 (64%)
Query: 196 IHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELME 251
++ + NKID+E+RE+ G FA++H M ++E SAK D V+ F ++ ++++
Sbjct: 116 VNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQ 171
>RGD|3527 [details] [associations]
symbol:Rab12 "RAB12, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0005525 "GTP binding" evidence=TAS] [GO:0005764 "lysosome"
evidence=ISO;ISS] [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction" evidence=IEA]
[GO:0008333 "endosome to lysosome transport" evidence=ISO;ISS]
[GO:0015031 "protein transport" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO;ISS] [GO:0030141 "secretory granule"
evidence=IDA] [GO:0044257 "cellular protein catabolic process"
evidence=ISO;ISS] [GO:0055038 "recycling endosome membrane"
evidence=ISO;ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:3527
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139
GO:GO:0015031 GO:GO:0030141 GO:GO:0005764 GO:GO:0008333
PROSITE:PS51419 GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003
GO:GO:0044257 HOVERGEN:HBG009351 CTD:201475 KO:K07907 EMBL:M83676
IPI:IPI00876621 PIR:C42148 RefSeq:NP_037149.1 UniGene:Rn.11021
ProteinModelPortal:P35284 SMR:P35284 IntAct:P35284 STRING:P35284
PRIDE:P35284 GeneID:25530 KEGG:rno:25530 NextBio:607023
Genevestigator:P35284 Uniprot:P35284
Length = 243
Score = 323 (118.8 bits), Expect = 7.0e-36, Sum P(2) = 7.0e-36
Identities = 64/130 (49%), Positives = 88/130 (67%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAG 65
F +V+++G+ GVGKT L+ RFT F +T+GVDF IKTVE+ ++I+LQIWDTAG
Sbjct: 40 FKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAG 99
Query: 66 QERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSGLK 125
QERF SIT +YYRSA +ILVYDI+ + TFD L W++ I++YAS +LVG +
Sbjct: 100 QERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCE 159
Query: 126 IVNEMASAAG 135
E++ G
Sbjct: 160 TDREISRQQG 169
Score = 97 (39.2 bits), Expect = 7.0e-36, Sum P(2) = 7.0e-36
Identities = 21/54 (38%), Positives = 38/54 (70%)
Query: 202 NKIDRE-DREIPTEVGEDFAKR-HDMYYLETSAKASDNVEKLFMQIAAELMEKL 253
NK+D E DREI + GE FA++ M + E SAK + NV+++F+++ ++++K+
Sbjct: 154 NKLDCETDREISRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKM 207
Score = 40 (19.1 bits), Expect = 6.6e-30, Sum P(2) = 6.6e-30
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 280 DAKSKPSFLSDKSLESCIKQIVKKFPNIDI 309
+A +K +F D+ + I+KK P +D+
Sbjct: 183 EASAKDNFNVDEIFLKLVDDILKKMP-LDV 211
>MGI|MGI:1917084 [details] [associations]
symbol:Rab43 "RAB43, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006184 "GTP catabolic process" evidence=ISO]
[GO:0007030 "Golgi organization" evidence=ISO] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0035526 "retrograde transport, plasma membrane to
Golgi" evidence=ISO] [GO:0045335 "phagocytic vesicle" evidence=ISO]
[GO:0090382 "phagosome maturation" evidence=ISO] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 MGI:MGI:1917084 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 OrthoDB:EOG4WQ13N CTD:339122 KO:K07930
OMA:LIGDCGT EMBL:AJ534465 IPI:IPI00468209 RefSeq:NP_001034483.1
UniGene:Mm.37380 ProteinModelPortal:Q8CG50 SMR:Q8CG50
PhosphoSite:Q8CG50 PaxDb:Q8CG50 PRIDE:Q8CG50
Ensembl:ENSMUST00000078647 GeneID:69834 KEGG:mmu:69834
InParanoid:Q8CG50 NextBio:330445 Bgee:Q8CG50 CleanEx:MM_RAB43
Genevestigator:Q8CG50 GermOnline:ENSMUSG00000030055 Uniprot:Q8CG50
Length = 210
Score = 393 (143.4 bits), Expect = 8.4e-36, P = 8.4e-36
Identities = 82/160 (51%), Positives = 111/160 (69%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 11 EHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIW 70
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDIS + TF + W+ ++ +YA ++++L+G
Sbjct: 71 DTAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNK 130
Query: 122 SGLKIVNE--MASAAGLLCTVDP--ALATALASDKTDLDE 157
S L E +A A L D A+ T+ A D ++++E
Sbjct: 131 SDLADFREVPLAEAQSLAEHYDILCAIETS-AKDSSNVEE 169
>UNIPROTKB|Q86YS6 [details] [associations]
symbol:RAB43 "Ras-related protein Rab-43" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0007030 "Golgi
organization" evidence=IMP] [GO:0035526 "retrograde transport,
plasma membrane to Golgi" evidence=IMP] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0090382 "phagosome maturation" evidence=IMP] [GO:0006184 "GTP
catabolic process" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 EMBL:CH471052 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 GermOnline:ENSG00000172780
HOGENOM:HOG000233968 OrthoDB:EOG4WQ13N CleanEx:HS_RAB41
EMBL:AY166852 EMBL:AK291014 EMBL:BC062319 IPI:IPI00329441
RefSeq:NP_001191812.1 RefSeq:NP_001191813.1 RefSeq:NP_001191814.1
RefSeq:NP_001191815.1 RefSeq:NP_940892.1 UniGene:Hs.381132
UniGene:Hs.546542 PDB:2HUP PDBsum:2HUP ProteinModelPortal:Q86YS6
SMR:Q86YS6 STRING:Q86YS6 PhosphoSite:Q86YS6 DMDM:74727944
PaxDb:Q86YS6 PRIDE:Q86YS6 Ensembl:ENST00000315150
Ensembl:ENST00000393304 Ensembl:ENST00000393305
Ensembl:ENST00000393307 Ensembl:ENST00000393308 GeneID:339122
KEGG:hsa:339122 UCSC:uc003eln.2 CTD:339122 GeneCards:GC03M128806
HGNC:HGNC:19983 HPA:HPA046840 neXtProt:NX_Q86YS6
PharmGKB:PA134968262 InParanoid:Q86YS6 KO:K07930 OMA:LIGDCGT
EvolutionaryTrace:Q86YS6 GenomeRNAi:339122 NextBio:97235
ArrayExpress:Q86YS6 Bgee:Q86YS6 CleanEx:HS_RAB43
Genevestigator:Q86YS6 Uniprot:Q86YS6
Length = 212
Score = 390 (142.3 bits), Expect = 1.8e-35, P = 1.8e-35
Identities = 80/160 (50%), Positives = 112/160 (70%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDI+ + +F + W+ ++ +YA ++++L+G
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNK 132
Query: 122 SGLKIVNE--MASAAGLLCTVDP--ALATALASDKTDLDE 157
S L + E +A A L D A+ T+ A D ++++E
Sbjct: 133 SDLSELREVSLAEAQSLAEHYDILCAIETS-AKDSSNVEE 171
>UNIPROTKB|Q58DS5 [details] [associations]
symbol:RAB13 "Ras-related protein Rab-13" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=ISS] [GO:0030659
"cytoplasmic vesicle membrane" evidence=IEA] [GO:0005923 "tight
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 GO:GO:0005923 GO:GO:0030659
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 EMBL:BT021522 EMBL:BC109840 IPI:IPI00687642
RefSeq:NP_001019711.1 UniGene:Bt.4127 ProteinModelPortal:Q58DS5
SMR:Q58DS5 STRING:Q58DS5 PRIDE:Q58DS5 Ensembl:ENSBTAT00000023407
GeneID:514541 KEGG:bta:514541 CTD:5872 GeneTree:ENSGT00700000104031
InParanoid:Q58DS5 KO:K06109 OrthoDB:EOG4BVRVS NextBio:20871388
Uniprot:Q58DS5
Length = 203
Score = 324 (119.1 bits), Expect = 2.3e-35, Sum P(2) = 2.3e-35
Identities = 60/116 (51%), Positives = 89/116 (76%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTCL+ RF + F +TIG+DF I+TV+I ++IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERF++IT +YYR A +ILVYDI+ + +F+ + +W++ I+E AS V R+L+G
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120
Score = 91 (37.1 bits), Expect = 2.3e-35, Sum P(2) = 2.3e-35
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 202 NKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
NK D E R++ E + A+ H + + ETSAK+S NV++ F +A +++ K
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK 172
>UNIPROTKB|P51153 [details] [associations]
symbol:RAB13 "Ras-related protein Rab-13" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005923 "tight junction" evidence=IEA] [GO:0030659 "cytoplasmic
vesicle membrane" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0007155 "cell adhesion" evidence=TAS] [GO:0006184 "GTP
catabolic process" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_11123 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0005737 GO:GO:0007264 GO:GO:0016192 GO:GO:0015031
GO:GO:0003924 GO:GO:0007155 GO:GO:0005923 GO:GO:0030659
PROSITE:PS51419 EMBL:CH471121 eggNOG:COG1100 HOVERGEN:HBG009351
EMBL:AL358472 CTD:5872 KO:K06109 OrthoDB:EOG4BVRVS EMBL:X75593
EMBL:AY423722 EMBL:AF498948 EMBL:AK291580 EMBL:BT019700
EMBL:BT019701 EMBL:BC000799 EMBL:BC009227 EMBL:BC073168
IPI:IPI00016373 PIR:A49647 RefSeq:NP_002861.1 UniGene:Hs.151536
ProteinModelPortal:P51153 SMR:P51153 IntAct:P51153 STRING:P51153
PhosphoSite:P51153 DMDM:1710016 PaxDb:P51153 PRIDE:P51153
DNASU:5872 Ensembl:ENST00000368575 GeneID:5872 KEGG:hsa:5872
UCSC:uc001fdt.1 GeneCards:GC01M153954 HGNC:HGNC:9762 HPA:HPA003996
MIM:602672 neXtProt:NX_P51153 PharmGKB:PA34103 InParanoid:P51153
OMA:AMGIVLI PhylomeDB:P51153 ChiTaRS:RAB13 GenomeRNAi:5872
NextBio:22808 ArrayExpress:P51153 Bgee:P51153 CleanEx:HS_RAB13
Genevestigator:P51153 GermOnline:ENSG00000143545 Uniprot:P51153
Length = 203
Score = 324 (119.1 bits), Expect = 2.3e-35, Sum P(2) = 2.3e-35
Identities = 60/116 (51%), Positives = 89/116 (76%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTCL+ RF + F +TIG+DF I+TV+I ++IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERF++IT +YYR A +ILVYDI+ + +F+ + +W++ I+E AS V R+L+G
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120
Score = 91 (37.1 bits), Expect = 2.3e-35, Sum P(2) = 2.3e-35
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 202 NKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
NK D E R++ E + A+ H + + ETSAK+S NV++ F +A +++ K
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK 172
>UNIPROTKB|F1RFW5 [details] [associations]
symbol:RAB13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005923 "tight junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 GO:GO:0007264 GO:GO:0015031 GO:GO:0005923 CTD:5872
GeneTree:ENSGT00700000104031 KO:K06109 EMBL:CU407290
RefSeq:XP_001927266.2 UniGene:Ssc.27516 Ensembl:ENSSSCT00000007191
GeneID:100154707 KEGG:ssc:100154707 Uniprot:F1RFW5
Length = 203
Score = 324 (119.1 bits), Expect = 2.3e-35, Sum P(2) = 2.3e-35
Identities = 60/116 (51%), Positives = 89/116 (76%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTCL+ RF + F +TIG+DF I+TV+I ++IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERF++IT +YYR A +ILVYDI+ + +F+ + +W++ I+E AS V R+L+G
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120
Score = 91 (37.1 bits), Expect = 2.3e-35, Sum P(2) = 2.3e-35
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 202 NKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
NK D E R++ E + A+ H + + ETSAK+S NV++ F +A +++ K
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK 172
>UNIPROTKB|I3L5L9 [details] [associations]
symbol:RAB13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005923 "tight junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 GO:GO:0007264 GO:GO:0015031 GO:GO:0005923
GeneTree:ENSGT00700000104031 OMA:AMGIVLI EMBL:CU407290
Ensembl:ENSSSCT00000031505 Uniprot:I3L5L9
Length = 242
Score = 324 (119.1 bits), Expect = 2.3e-35, Sum P(2) = 2.3e-35
Identities = 60/116 (51%), Positives = 89/116 (76%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTCL+ RF + F +TIG+DF I+TV+I ++IKLQ+WDT
Sbjct: 44 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 103
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERF++IT +YYR A +ILVYDI+ + +F+ + +W++ I+E AS V R+L+G
Sbjct: 104 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 159
Score = 91 (37.1 bits), Expect = 2.3e-35, Sum P(2) = 2.3e-35
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 202 NKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
NK D E R++ E + A+ H + + ETSAK+S NV++ F +A +++ K
Sbjct: 160 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK 211
>UNIPROTKB|I3LSL6 [details] [associations]
symbol:I3LSL6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104031 OMA:PSEPRFR
EMBL:FP102350 Ensembl:ENSSSCT00000024607 Uniprot:I3LSL6
Length = 192
Score = 322 (118.4 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 59/112 (52%), Positives = 86/112 (76%)
Query: 9 KVVLVGNAGVGKTCLVRRFTQGVFPPGQG-ATIGVDFMIKTVEINNERIKLQIWDTAGQE 67
+V+LVG++GVGKTCL+ RF G F G +T+G+DF K ++++ ++KLQIWDTAGQE
Sbjct: 1 QVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKILDVDGMKVKLQIWDTAGQE 60
Query: 68 RFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
RFRS+T +YYR AHAL+L+YD++ + +FD + WL EI+EYA V+ +L+G
Sbjct: 61 RFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEYAQRDVVLLLLG 112
Score = 93 (37.8 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 202 NKIDR-EDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAE 255
NK+D ++R + E GE AK + ++ETSA+ NV+ F +A EL ++L +
Sbjct: 113 NKVDSAQERVVRREDGEQLAKEFGLPFMETSARTGLNVDLAFTAVAKELKQRLTK 167
>UNIPROTKB|E2RP90 [details] [associations]
symbol:RAB43 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104044 KO:K07930 OMA:LIGDCGT
EMBL:AAEX03012024 RefSeq:XP_003639768.1 ProteinModelPortal:E2RP90
Ensembl:ENSCAFT00000006967 GeneID:100856686 KEGG:cfa:100856686
Uniprot:E2RP90
Length = 212
Score = 388 (141.6 bits), Expect = 3.0e-35, P = 3.0e-35
Identities = 80/160 (50%), Positives = 112/160 (70%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDI+ + +F + W+ ++ +YA ++++L+G
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNK 132
Query: 122 SGLKIVNE--MASAAGLLCTVDP--ALATALASDKTDLDE 157
S L + E +A A L D A+ T+ A D ++++E
Sbjct: 133 SDLGQLREVPLAEAQSLAEHYDILCAIETS-AKDSSNVEE 171
>UNIPROTKB|F1P1G4 [details] [associations]
symbol:RAB43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104044 OMA:LIGDCGT
EMBL:AADN02013932 IPI:IPI00591348 ProteinModelPortal:F1P1G4
Ensembl:ENSGALT00000008038 Uniprot:F1P1G4
Length = 212
Score = 387 (141.3 bits), Expect = 3.8e-35, P = 3.8e-35
Identities = 82/172 (47%), Positives = 116/172 (67%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VL+G+A VGKTCLV+RF G F QG+TIGVDF +K++EI +R+KLQIW
Sbjct: 12 ESYDFLFKLVLIGDASVGKTCLVQRFKTGAFAERQGSTIGVDFTMKSLEIQGKRVKLQIW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ IL YDIS + +F + W+ ++ +YA ++++L+G
Sbjct: 72 DTAGQERFRTITQSYYRSANGAILAYDISKRGSFLSIPRWIEDVRKYAGSNIVQLLIGNK 131
Query: 122 SGLKIVNE--MASAAGLLCTVDP---ALATALASDKTDLDEDEHVLACLLMV 168
S L + E + A L D A+ T+ A D ++++E +A LM+
Sbjct: 132 SDLSDLREVQLEEAQSLAERYDNIICAIETS-AKDSSNVEEAFVKMATELMM 182
>ZFIN|ZDB-GENE-050417-216 [details] [associations]
symbol:zgc:112183 "zgc:112183" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-050417-216 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351 KO:K07914
EMBL:BC093248 IPI:IPI00507050 RefSeq:NP_001017715.1
UniGene:Dr.81352 ProteinModelPortal:Q567B0 SMR:Q567B0 GeneID:550410
KEGG:dre:550410 NextBio:20879659 Uniprot:Q567B0
Length = 230
Score = 323 (118.8 bits), Expect = 3.8e-35, Sum P(2) = 3.8e-35
Identities = 63/124 (50%), Positives = 88/124 (70%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQG-ATIGVDFMIKTVEINNERIKLQI 60
E + FKV+L+G++ VGKTC++ RF G F G AT+G+DF K V ++N ++KLQI
Sbjct: 30 EYFDIAFKVMLLGDSAVGKTCVLVRFKDGAFLGGNFIATVGIDFRNKVVTVDNMKVKLQI 89
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGG 120
WDTAGQERFRS+T +YYR A AL+L+YDI+ + +FD + WL EI EYA V+ +L+G
Sbjct: 90 WDTAGQERFRSVTHAYYRDAQALLLLYDITRKSSFDNIRAWLTEIYEYAQKDVVIMLLGN 149
Query: 121 TSGL 124
S +
Sbjct: 150 KSDM 153
Score = 90 (36.7 bits), Expect = 3.8e-35, Sum P(2) = 3.8e-35
Identities = 24/56 (42%), Positives = 31/56 (55%)
Query: 202 NKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEK 256
NK D +R I E GE AK + + ++ETSAK NVE F IA EL + E+
Sbjct: 149 NKSDMAAERVITHEEGEKLAKEYGVPFMETSAKTGVNVELAFHAIARELKHRNLEQ 204
>UNIPROTKB|J9NRZ2 [details] [associations]
symbol:RAB18 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 InterPro:IPR025662
PROSITE:PS00675 GeneTree:ENSGT00700000104044 OMA:FAKRHRT
EMBL:AAEX03001165 Ensembl:ENSCAFT00000043572 Uniprot:J9NRZ2
Length = 206
Score = 300 (110.7 bits), Expect = 6.1e-35, Sum P(2) = 6.1e-35
Identities = 57/119 (47%), Positives = 81/119 (68%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
ED K++++G +GVGK+ L+ RFT F P ATIGVDF +KT+ ++ + KL IW
Sbjct: 3 EDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFK-VLRVLVG 119
TAGQERFR++T SYYR A +ILVYD++ + TF L +WL E+E Y + ++ +LVG
Sbjct: 63 GTAGQERFRTLTPSYYRGAPGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVG 121
Score = 112 (44.5 bits), Expect = 6.1e-35, Sum P(2) = 6.1e-35
Identities = 19/56 (33%), Positives = 36/56 (64%)
Query: 196 IHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELME 251
++ + NKID+E+RE+ G FA++H M ++E SAK D V+ F ++ ++++
Sbjct: 116 VNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQ 171
>DICTYBASE|DDB_G0284985 [details] [associations]
symbol:rab1D "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0284985 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0045335
GenomeReviews:CM000153_GR GO:GO:0015031 EMBL:AAFI02000073
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HSSP:P62820
RefSeq:XP_639975.1 ProteinModelPortal:Q54NU2 SMR:Q54NU2
PRIDE:Q54NU2 EnsemblProtists:DDB0229398 GeneID:8624886
KEGG:ddi:DDB_G0284985 OMA:AKDFADS Uniprot:Q54NU2
Length = 204
Score = 325 (119.5 bits), Expect = 7.7e-35, Sum P(2) = 7.7e-35
Identities = 64/127 (50%), Positives = 89/127 (70%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
++ F FK++L+G++GVGK+CL+ RF + +TIGVDF IKT+ ++ + IKLQIWD
Sbjct: 6 EHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWD 65
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR A +ILVYD + Q +F + W+ EI+ YA V ++LVG +
Sbjct: 66 TAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYACENVNKLLVGNKT 125
Query: 123 GLKIVNE 129
L VNE
Sbjct: 126 DL--VNE 130
Score = 85 (35.0 bits), Expect = 7.7e-35, Sum P(2) = 7.7e-35
Identities = 17/55 (30%), Positives = 35/55 (63%)
Query: 202 NKIDR-EDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAE 255
NK D ++ + + + FA+ + + ++ETSAK + NVE+ F+ +A ++ +LA+
Sbjct: 123 NKTDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDIKNRLAD 177
>ZFIN|ZDB-GENE-050522-555 [details] [associations]
symbol:rab12 "RAB12, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-050522-555 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
HOGENOM:HOG000233968 CTD:201475 KO:K07907
GeneTree:ENSGT00700000104049 EMBL:CABZ01050277 EMBL:CABZ01050278
EMBL:CABZ01050279 EMBL:BC095608 IPI:IPI00499927
RefSeq:NP_001018466.1 UniGene:Dr.84887 SMR:Q502Q0
Ensembl:ENSDART00000127124 GeneID:553657 KEGG:dre:553657
InParanoid:Q502Q0 NextBio:20880391 Uniprot:Q502Q0
Length = 235
Score = 319 (117.4 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 62/117 (52%), Positives = 84/117 (71%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DYK +V+++G+ GVGKT L+ RFT F +T+GVDF IKTVE+ ++I+LQIWD
Sbjct: 33 DYKL--QVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWD 90
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERF SIT +YYR A ++LVYDI+ Q TF+ L W++ I++YAS +LVG
Sbjct: 91 TAGQERFNSITSAYYRGAKGIVLVYDITKQETFEDLPKWMKMIDKYASEDAELLLVG 147
Score = 87 (35.7 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 202 NKIDRE-DREIPTEVGEDFAKR-HDMYYLETSAKASDNVEKLFMQIAAELMEKL 253
NK+D E DR I + E FA R M + E SAK + NV+++F+++ +++ K+
Sbjct: 148 NKLDCESDRAISRQQAERFASRISGMRFCEASAKDNFNVDEIFLKLVDDILSKM 201
Score = 37 (18.1 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
Identities = 18/71 (25%), Positives = 33/71 (46%)
Query: 247 AELMEKLAEKLTIMHDRGVG------MLTRIYNIKKACGDAKSKPSFLSDKSLESCIKQI 300
AEL+ + KL DR + +RI ++ C +A +K +F D+ + I
Sbjct: 141 AELL-LVGNKLDCESDRAISRQQAERFASRISGMR-FC-EASAKDNFNVDEIFLKLVDDI 197
Query: 301 VKKFPNIDIKS 311
+ K P +++ S
Sbjct: 198 LSKMP-LEVPS 207
>DICTYBASE|DDB_G0289827 [details] [associations]
symbol:rab18 "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0006810
"transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0289827
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GenomeReviews:CM000154_GR EMBL:AAFI02000149 PROSITE:PS51419
eggNOG:COG1100 KO:K07910 OMA:FAKRHRT RefSeq:XP_636019.1 HSSP:Q9NP72
ProteinModelPortal:Q54GY8 SMR:Q54GY8 PRIDE:Q54GY8
EnsemblProtists:DDB0229409 GeneID:8627345 KEGG:ddi:DDB_G0289827
Uniprot:Q54GY8
Length = 202
Score = 286 (105.7 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 54/120 (45%), Positives = 86/120 (71%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
ME+ K +KV+L+G++ VGKT +V+RF+ F TIGV+F +K V+++ +++ L I
Sbjct: 1 MEEDK-QYKVLLIGDSDVGKTSIVKRFSDDTFDEDLLCTIGVEFKMKEVKVDGKKVDLCI 59
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYAS-FKVLRVLVG 119
WDTAGQE+FR++ SYYR AH +IL YD++ + +FD L WL E+E +A+ ++++LVG
Sbjct: 60 WDTAGQEKFRALISSYYRGAHGIILTYDVTKRESFDNLNYWLNEVENFANRSNLVKLLVG 119
Score = 121 (47.7 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 22/59 (37%), Positives = 40/59 (67%)
Query: 193 SNNIHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELME 251
SN + + NKID+E+RE+ E G +FAK+ M ++E SAK+ +++ F ++A +++E
Sbjct: 111 SNLVKLLVGNKIDKENREVTREEGAEFAKKKAMLFIECSAKSKIGIQQAFEELAQKIIE 169
Score = 41 (19.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 105 IEEYASFKVLRVL---VGGTSGLKIVNEMASAAGLLCTV 140
+EE +KVL + VG TS +K ++ LLCT+
Sbjct: 1 MEEDKQYKVLLIGDSDVGKTSIVKRFSDDTFDEDLLCTI 39
>UNIPROTKB|B2RAA6 [details] [associations]
symbol:RAB26 "cDNA, FLJ94800, Homo sapiens RAB26, member
RAS oncogene family (RAB26), mRNA" species:9606 "Homo sapiens"
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0017157 "regulation of
exocytosis" evidence=IEA] [GO:0031226 "intrinsic to plasma
membrane" evidence=IEA] [GO:0035272 "exocrine system development"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0031226 EMBL:AC009065 HOVERGEN:HBG009351 GO:GO:0017157
GO:GO:0035272 UniGene:Hs.3797 HGNC:HGNC:14259 ChiTaRS:RAB26
EMBL:AK314110 IPI:IPI01011362 SMR:B2RAA6 STRING:B2RAA6
Ensembl:ENST00000541451 Uniprot:B2RAA6
Length = 190
Score = 311 (114.5 bits), Expect = 3.8e-34, Sum P(2) = 3.8e-34
Identities = 57/110 (51%), Positives = 82/110 (74%)
Query: 11 VLVGNAGVGKTCLVRRFTQGVFPPGQG-ATIGVDFMIKTVEINNERIKLQIWDTAGQERF 69
+LVG++GVGKTCL+ RF G F G +T+G+DF K ++++ ++KLQ+WDTAGQERF
Sbjct: 1 MLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQERF 60
Query: 70 RSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
RS+T +YYR AHAL+L+YD++ + +FD + WL EI EYA V +L+G
Sbjct: 61 RSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLG 110
Score = 93 (37.8 bits), Expect = 3.8e-34, Sum P(2) = 3.8e-34
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 202 NKIDR-EDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
NK+D +R + E GE AK + + ++ETSAK NV+ F IA EL ++
Sbjct: 111 NKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKQR 162
>UNIPROTKB|Q9H082 [details] [associations]
symbol:RAB33B "Ras-related protein Rab-33B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:2000156 "regulation of retrograde vesicle-mediated transport,
Golgi to ER" evidence=IMP] [GO:2000785 "regulation of autophagic
vacuole assembly" evidence=ISS] [GO:0005796 "Golgi lumen"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139 GO:GO:0015031
GO:GO:0006914 PROSITE:PS51419 GO:GO:0005796 eggNOG:COG1100
GO:GO:2000156 HOVERGEN:HBG009351 MIM:607326 GO:GO:2000785
HOGENOM:HOG000233968 CTD:83452 KO:K07920 OMA:PAWIEEC
OrthoDB:EOG4KH2W0 EMBL:AF350420 EMBL:AL136904 EMBL:AK313685
EMBL:AC114743 EMBL:BC111977 IPI:IPI00021475 RefSeq:NP_112586.1
UniGene:Hs.591679 ProteinModelPortal:Q9H082 SMR:Q9H082
IntAct:Q9H082 STRING:Q9H082 PhosphoSite:Q9H082 DMDM:14916662
PaxDb:Q9H082 PeptideAtlas:Q9H082 PRIDE:Q9H082
Ensembl:ENST00000305626 GeneID:83452 KEGG:hsa:83452 UCSC:uc003ihv.3
GeneCards:GC04P140374 HGNC:HGNC:16075 HPA:HPA048367 MIM:605950
neXtProt:NX_Q9H082 PharmGKB:PA34125 InParanoid:Q9H082
PhylomeDB:Q9H082 GenomeRNAi:83452 NextBio:72374 Bgee:Q9H082
CleanEx:HS_RAB33B Genevestigator:Q9H082 GermOnline:ENSG00000172007
Uniprot:Q9H082
Length = 229
Score = 307 (113.1 bits), Expect = 5.0e-34, Sum P(2) = 5.0e-34
Identities = 58/121 (47%), Positives = 84/121 (69%)
Query: 7 LFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAGQ 66
+FK++++G++ VGKTCL RF G FP ATIGVDF + VEI+ ERIK+Q+WDTAGQ
Sbjct: 33 IFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTAGQ 92
Query: 67 ERFR-SITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYA-SFKVLRVLVGGTSGL 124
ERFR S+ Q YYR+ HA++ VYD++ +F L W+ E +++ + + R+LVG L
Sbjct: 93 ERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLANDIPRILVGNKCDL 152
Query: 125 K 125
+
Sbjct: 153 R 153
Score = 96 (38.9 bits), Expect = 5.0e-34, Sum P(2) = 5.0e-34
Identities = 27/78 (34%), Positives = 42/78 (53%)
Query: 193 SNNI-HCMARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKA---SDNVEKLFMQIAA 247
+N+I + NK D R ++PT++ + FA H M ETSAK +D+VE +FM +A
Sbjct: 138 ANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAH 197
Query: 248 ELMEKLAEKLTIMHDRGV 265
+L L+ D G+
Sbjct: 198 KLKSHKPLMLSQPPDNGI 215
>DICTYBASE|DDB_G0277101 [details] [associations]
symbol:rab11C "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0000331 "contractile vacuole"
evidence=IDA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0277101
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0016020
GO:GO:0015031 GenomeReviews:CM000151_GR GO:GO:0000331
PROSITE:PS51419 EMBL:AAFI02000019 eggNOG:COG1100 KO:K07976
HSSP:Q15907 OMA:GRIHEVV RefSeq:XP_642956.1
ProteinModelPortal:Q550H6 SMR:Q550H6 MINT:MINT-6947891 PRIDE:Q550H6
EnsemblProtists:DDB0229395 GeneID:8620825 KEGG:ddi:DDB_G0277101
Uniprot:Q550H6
Length = 224
Score = 308 (113.5 bits), Expect = 6.3e-34, Sum P(2) = 6.3e-34
Identities = 59/129 (45%), Positives = 89/129 (68%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E+ ++LFK+V++G++ VGK+ L+ RFT+ F ATIGVDF K++EI+N+ I Q W
Sbjct: 5 EEAEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCW 64
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR++T YYR A ++VYDI+ + +F +T WL E+ E A +L ++VG
Sbjct: 65 DTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGNK 124
Query: 122 SGLKIVNEM 130
S L++ E+
Sbjct: 125 SDLEMSREV 133
Score = 94 (38.1 bits), Expect = 6.3e-34, Sum P(2) = 6.3e-34
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 199 MARNKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
M NK D E RE+PT+ + FA+ + + +LETSA S NV + F ++ ++ ++ K
Sbjct: 120 MVGNKSDLEMSREVPTKEAQAFAESNKISFLETSALNSTNVNQSFERLLTDIYHLVSSKK 179
Query: 258 TIMHD 262
++ D
Sbjct: 180 PMVVD 184
>UNIPROTKB|Q5R615 [details] [associations]
symbol:RAB33B "Ras-related protein Rab-33B" species:9601
"Pongo abelii" [GO:0005796 "Golgi lumen" evidence=ISS] [GO:2000156
"regulation of retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISS] [GO:2000785 "regulation of autophagic vacuole
assembly" evidence=ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139
GO:GO:0015031 GO:GO:0006914 PROSITE:PS51419 GO:GO:0005796
GO:GO:2000156 HOVERGEN:HBG009351 GO:GO:2000785
GeneTree:ENSGT00700000104044 HSSP:O35963 CTD:83452 KO:K07920
OMA:PAWIEEC OrthoDB:EOG4KH2W0 EMBL:CR860685 RefSeq:NP_001126634.1
UniGene:Pab.2592 ProteinModelPortal:Q5R615 SMR:Q5R615 PRIDE:Q5R615
Ensembl:ENSPPYT00000017519 GeneID:100173632 KEGG:pon:100173632
InParanoid:Q5R615 Uniprot:Q5R615
Length = 229
Score = 308 (113.5 bits), Expect = 6.3e-34, Sum P(2) = 6.3e-34
Identities = 58/121 (47%), Positives = 84/121 (69%)
Query: 7 LFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAGQ 66
+FK++++G++ VGKTCL RF G FP ATIGVDF + VEI+ ERIK+Q+WDTAGQ
Sbjct: 33 IFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTAGQ 92
Query: 67 ERFR-SITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYA-SFKVLRVLVGGTSGL 124
ERFR S+ Q YYR+ HA++ VYD++ +F L W+ E +++ + + R+LVG L
Sbjct: 93 ERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLASDIPRILVGNKCDL 152
Query: 125 K 125
+
Sbjct: 153 R 153
Score = 94 (38.1 bits), Expect = 6.3e-34, Sum P(2) = 6.3e-34
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 202 NKID-REDREIPTEVGEDFAKRHDMYYLETSAKA---SDNVEKLFMQIAAELMEKLAEKL 257
NK D R ++PT++ + FA H M ETSAK +D+VE +FM +A +L L
Sbjct: 148 NKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLKSHKPLML 207
Query: 258 TIMHDRGV 265
+ D G+
Sbjct: 208 SQPPDNGI 215
>UNIPROTKB|I3LK86 [details] [associations]
symbol:RAB33B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000785 "regulation of autophagic vacuole assembly"
evidence=IEA] [GO:2000156 "regulation of retrograde
vesicle-mediated transport, Golgi to ER" evidence=IEA] [GO:0005796
"Golgi lumen" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104044 KO:K07920 OMA:PAWIEEC EMBL:CU467739
RefSeq:XP_003357069.1 Ensembl:ENSSSCT00000023933 GeneID:100626608
KEGG:ssc:100626608 Uniprot:I3LK86
Length = 229
Score = 307 (113.1 bits), Expect = 6.3e-34, Sum P(2) = 6.3e-34
Identities = 58/121 (47%), Positives = 84/121 (69%)
Query: 7 LFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAGQ 66
+FK++++G++ VGKTCL RF G FP ATIGVDF + VEI+ ERIK+Q+WDTAGQ
Sbjct: 33 IFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDEERIKIQLWDTAGQ 92
Query: 67 ERFR-SITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYA-SFKVLRVLVGGTSGL 124
ERFR S+ Q YYR+ HA++ VYD++ +F L W+ E +++ + + R+LVG L
Sbjct: 93 ERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLANDIPRILVGNKCDL 152
Query: 125 K 125
+
Sbjct: 153 R 153
Score = 95 (38.5 bits), Expect = 6.3e-34, Sum P(2) = 6.3e-34
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 193 SNNI-HCMARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKA---SDNVEKLFMQIAA 247
+N+I + NK D R ++PT++ + FA H M ETSAK +D+VE +FM +A
Sbjct: 138 ANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAH 197
Query: 248 ELMEKLAEKLTIMHDRGV 265
+L L+ D GV
Sbjct: 198 KLKSHKPLMLSQPPDDGV 215
>CGD|CAL0001430 [details] [associations]
symbol:YPT1 species:5476 "Candida albicans" [GO:0009306
"protein secretion" evidence=IGI;IMP] [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0035690 "cellular response
to drug" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IMP]
[GO:0005795 "Golgi stack" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000407
"pre-autophagosomal structure" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0034498 "early endosome to Golgi transport" evidence=IEA]
[GO:0048211 "Golgi vesicle docking" evidence=IEA] [GO:0032258 "CVT
pathway" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0035494 "SNARE complex disassembly" evidence=IEA]
[GO:0090114 "COPII-coated vesicle budding" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] [GO:0048194 "Golgi vesicle budding" evidence=IEA]
[GO:0070317 "negative regulation of G0 to G1 transition"
evidence=IEA] [GO:0032456 "endocytic recycling" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=IEA] [GO:0016236
"macroautophagy" evidence=IEA] [GO:0000149 "SNARE binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 CGD:CAL0001430
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
EMBL:AACQ01000017 EMBL:AACQ01000015 GO:GO:0009306 GO:GO:0035690
GO:GO:0006888 eggNOG:COG1100 GO:GO:0000390 HOGENOM:HOG000233968
KO:K07874 RefSeq:XP_721279.1 RefSeq:XP_721550.1
ProteinModelPortal:Q5AI00 SMR:Q5AI00 STRING:Q5AI00 GeneID:3636915
GeneID:3637145 KEGG:cal:CaO19.10570 KEGG:cal:CaO19.3052
Uniprot:Q5AI00
Length = 207
Score = 375 (137.1 bits), Expect = 7.7e-34, P = 7.7e-34
Identities = 76/165 (46%), Positives = 116/165 (70%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + P +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA+ V+++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 123 GL---KIVNEMASAAGLLCTVD-PALATALASDKTDLDEDEHVLA 163
L KIV E +A +D P L T+ S T++++ + +A
Sbjct: 124 DLSDKKIV-EYTAAKEFADALDIPFLETSALSS-TNVEQAFYTMA 166
>UNIPROTKB|Q5AI00 [details] [associations]
symbol:YPT1 "Likely RAB family GTP binding protein involved
in secretion" species:237561 "Candida albicans SC5314" [GO:0000390
"spliceosomal complex disassembly" evidence=ISS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0009306 "protein
secretion" evidence=IGI;IMP] [GO:0035690 "cellular response to
drug" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
CGD:CAL0001430 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 EMBL:AACQ01000017 EMBL:AACQ01000015 GO:GO:0009306
GO:GO:0035690 GO:GO:0006888 eggNOG:COG1100 GO:GO:0000390
HOGENOM:HOG000233968 KO:K07874 RefSeq:XP_721279.1
RefSeq:XP_721550.1 ProteinModelPortal:Q5AI00 SMR:Q5AI00
STRING:Q5AI00 GeneID:3636915 GeneID:3637145 KEGG:cal:CaO19.10570
KEGG:cal:CaO19.3052 Uniprot:Q5AI00
Length = 207
Score = 375 (137.1 bits), Expect = 7.7e-34, P = 7.7e-34
Identities = 76/165 (46%), Positives = 116/165 (70%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + P +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA+ V+++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKA 123
Query: 123 GL---KIVNEMASAAGLLCTVD-PALATALASDKTDLDEDEHVLA 163
L KIV E +A +D P L T+ S T++++ + +A
Sbjct: 124 DLSDKKIV-EYTAAKEFADALDIPFLETSALSS-TNVEQAFYTMA 166
>UNIPROTKB|A4FUD7 [details] [associations]
symbol:RAB33B "RAB33B protein" species:9913 "Bos taurus"
[GO:2000785 "regulation of autophagic vacuole assembly"
evidence=IEA] [GO:2000156 "regulation of retrograde
vesicle-mediated transport, Golgi to ER" evidence=IEA] [GO:0005796
"Golgi lumen" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 CTD:83452 KO:K07920 OMA:PAWIEEC
OrthoDB:EOG4KH2W0 EMBL:DAAA02044439 EMBL:BC114731 IPI:IPI00687033
RefSeq:NP_001076909.1 UniGene:Bt.39194 SMR:A4FUD7 STRING:A4FUD7
Ensembl:ENSBTAT00000004165 GeneID:519982 KEGG:bta:519982
InParanoid:A4FUD7 NextBio:20872994 Uniprot:A4FUD7
Length = 229
Score = 307 (113.1 bits), Expect = 8.0e-34, Sum P(2) = 8.0e-34
Identities = 58/121 (47%), Positives = 84/121 (69%)
Query: 7 LFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAGQ 66
+FK++++G++ VGKTCL RF G FP ATIGVDF + VEI+ ERIK+Q+WDTAGQ
Sbjct: 33 IFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTAGQ 92
Query: 67 ERFR-SITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYA-SFKVLRVLVGGTSGL 124
ERFR S+ Q YYR+ HA++ VYD++ +F L W+ E +++ + + R+LVG L
Sbjct: 93 ERFRKSMIQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLATDIPRILVGNKCDL 152
Query: 125 K 125
+
Sbjct: 153 R 153
Score = 94 (38.1 bits), Expect = 8.0e-34, Sum P(2) = 8.0e-34
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 202 NKID-REDREIPTEVGEDFAKRHDMYYLETSAKA---SDNVEKLFMQIAAELMEKLAEKL 257
NK D R ++PT++ + FA H M ETSAK +D+VE +FM +A +L L
Sbjct: 148 NKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLKSHKPLML 207
Query: 258 TIMHDRGV 265
+ D G+
Sbjct: 208 SQPPDNGI 215
>UNIPROTKB|C9JJQ5 [details] [associations]
symbol:RAB19 "Ras-related protein Rab-19" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AC069335
HOGENOM:HOG000233968 OrthoDB:EOG4WQ13N EMBL:AC093087
HGNC:HGNC:19982 IPI:IPI00946179 ProteinModelPortal:C9JJQ5
SMR:C9JJQ5 STRING:C9JJQ5 Ensembl:ENST00000495590
ArrayExpress:C9JJQ5 Bgee:C9JJQ5 Uniprot:C9JJQ5
Length = 149
Score = 359 (131.4 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 60/123 (48%), Positives = 95/123 (77%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK++L+G++ VGKTC+V+ F GV+ Q TIGVDF +++++I+ +++K+Q+W
Sbjct: 12 ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + V+ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNK 131
Query: 122 SGL 124
L
Sbjct: 132 CDL 134
Score = 37 (18.1 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 148 LASDKTDLDEDEHVL---ACLL 166
L +K DL E HVL AC L
Sbjct: 127 LIGNKCDLWEKRHVLFEDACTL 148
>ZFIN|ZDB-GENE-060825-25 [details] [associations]
symbol:zgc:153788 "zgc:153788" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-060825-25 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 OrthoDB:EOG4WQ13N
KO:K07930 OMA:LIGDCGT EMBL:CR855375 EMBL:BC122421 IPI:IPI00786530
RefSeq:NP_001038812.1 UniGene:Dr.49036 SMR:Q0P3V5
Ensembl:ENSDART00000082517 GeneID:751627 KEGG:dre:751627
InParanoid:Q0P3V5 NextBio:20917779 Uniprot:Q0P3V5
Length = 208
Score = 372 (136.0 bits), Expect = 1.6e-33, P = 1.6e-33
Identities = 76/171 (44%), Positives = 115/171 (67%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ Y +FK+VLVG+ GVGKTC+V+RF G+F QG TIGVDF +KT+EI+ +R+KLQIW
Sbjct: 8 DSYDLVFKIVLVGDVGVGKTCVVQRFKTGIFIEKQGNTIGVDFTMKTLEIHGKRVKLQIW 67
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ I+ YDI+ + TF + W+ ++++Y ++ +L+G
Sbjct: 68 DTAGQERFRTITQSYYRSANGAIITYDITKKATFLSVPKWMEDVKKYGGSNIVPLLIGNK 127
Query: 122 SGLKIVNE--MASAAGLLCTVD--PALATALASDKTDLDEDEHVLACLLMV 168
L E + A + +D A+ T+ A D +++DE + +A L++
Sbjct: 128 CDLSESREVPLEDAQTMAHQLDFVSAIETS-AKDSSNVDEAFNKMASELIL 177
>RGD|1308353 [details] [associations]
symbol:Rab33b "RAB33B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0005796 "Golgi lumen" evidence=IEA;ISO]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0015031 "protein transport" evidence=IEA] [GO:2000156
"regulation of retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA;ISO] [GO:2000785 "regulation of autophagic vacuole
assembly" evidence=IEA;ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:1308353 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 GeneTree:ENSGT00700000104044
OMA:PAWIEEC IPI:IPI00192216 ProteinModelPortal:F1LW77 PRIDE:F1LW77
Ensembl:ENSRNOT00000017396 Uniprot:F1LW77
Length = 264
Score = 304 (112.1 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
Identities = 57/121 (47%), Positives = 84/121 (69%)
Query: 7 LFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAGQ 66
+FK++++G++ VGKTCL RF G FP ATIGVDF + V+I+ ERIK+Q+WDTAGQ
Sbjct: 68 IFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQ 127
Query: 67 ERFR-SITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYA-SFKVLRVLVGGTSGL 124
ERFR S+ Q YYR+ HA++ VYD++ +F L W+ E +++ + + R+LVG L
Sbjct: 128 ERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLANDIPRILVGNKCDL 187
Query: 125 K 125
+
Sbjct: 188 R 188
Score = 94 (38.1 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 193 SNNI-HCMARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKA---SDNVEKLFMQIAA 247
+N+I + NK D R ++PT++ + FA H M ETSAK +D+VE +FM +A
Sbjct: 173 ANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAH 232
Query: 248 ELMEKLAEKLTIMHDRGVGM 267
+L L+ + D + +
Sbjct: 233 KLKSHKPLMLSQLPDNRISL 252
>WB|WBGene00004277 [details] [associations]
symbol:rab-18 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0009792 GO:GO:0007264 GO:GO:0015031
GO:GO:0042127 GO:GO:0007281 PROSITE:PS51419 GO:GO:0040020
eggNOG:COG1100 InterPro:IPR025662 GO:GO:0040022
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 KO:K07910
EMBL:FO080242 RefSeq:NP_741092.1 RefSeq:NP_741093.2
ProteinModelPortal:Q8MXS1 SMR:Q8MXS1 PaxDb:Q8MXS1 PRIDE:Q8MXS1
EnsemblMetazoa:Y92C3B.3b GeneID:175272 KEGG:cel:CELE_Y92C3B.3
UCSC:Y92C3B.3b CTD:175272 WormBase:Y92C3B.3a WormBase:Y92C3B.3b
InParanoid:Q8MXS1 OMA:FAKRHRT NextBio:887480 Uniprot:Q8MXS1
Length = 203
Score = 294 (108.6 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 51/111 (45%), Positives = 81/111 (72%)
Query: 9 KVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAGQER 68
K++++G +GVGK+ L+ RF VF P Q ATIGVDF + ++ I+ R+KL IWDTAGQER
Sbjct: 13 KILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQER 72
Query: 69 FRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASF-KVLRVLV 118
FR++T SYYR A +I VYD++ + +F+ L W++E++ Y + +++++V
Sbjct: 73 FRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMV 123
Score = 103 (41.3 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 192 HSNNIHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELME 251
+ N I M NKID +R + E G FAKRH ++E SAK + V+ F EL+E
Sbjct: 115 NDNIIKMMVANKIDMPNRVVTREEGLKFAKRHRTLFIEASAKTKEGVQCTF----EELIE 170
Query: 252 KLAE 255
K+ +
Sbjct: 171 KIIQ 174
>MGI|MGI:1330805 [details] [associations]
symbol:Rab33b "RAB33B, member of RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005796 "Golgi lumen"
evidence=ISO;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006914
"autophagy" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:2000156
"regulation of retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISO] [GO:2000785 "regulation of autophagic vacuole
assembly" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:1330805 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0000139 GO:GO:0015031 GO:GO:0006914 PROSITE:PS51419
GO:GO:0005796 eggNOG:COG1100 GO:GO:2000156 HOVERGEN:HBG009351
PDB:2G77 PDBsum:2G77 GO:GO:2000785 HOGENOM:HOG000233968 CTD:83452
KO:K07920 OMA:PAWIEEC OrthoDB:EOG4KH2W0 EMBL:AB004665 EMBL:AB004664
EMBL:AK004974 EMBL:AK087967 EMBL:AK139821 EMBL:AK159674
EMBL:BC065076 IPI:IPI00136271 RefSeq:NP_058554.1 UniGene:Mm.1664
PDB:1Z06 PDBsum:1Z06 ProteinModelPortal:O35963 SMR:O35963
STRING:O35963 PhosphoSite:O35963 PaxDb:O35963 PRIDE:O35963
Ensembl:ENSMUST00000054387 GeneID:19338 KEGG:mmu:19338
InParanoid:O35963 ChiTaRS:RAB33B EvolutionaryTrace:O35963
NextBio:296335 Bgee:O35963 CleanEx:MM_RAB33B Genevestigator:O35963
GermOnline:ENSMUSG00000027739 Uniprot:O35963
Length = 229
Score = 302 (111.4 bits), Expect = 2.8e-33, Sum P(2) = 2.8e-33
Identities = 57/121 (47%), Positives = 84/121 (69%)
Query: 7 LFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAGQ 66
+FK++++G++ VGKTCL RF G FP ATIGVDF + V+I+ ERIK+Q+WDTAGQ
Sbjct: 33 IFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQ 92
Query: 67 ERFR-SITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYA-SFKVLRVLVGGTSGL 124
ERFR S+ Q YYR+ HA++ VYD++ +F L W+ E +++ + + R+LVG L
Sbjct: 93 ERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDL 152
Query: 125 K 125
+
Sbjct: 153 R 153
Score = 94 (38.1 bits), Expect = 2.8e-33, Sum P(2) = 2.8e-33
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 193 SNNI-HCMARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKA---SDNVEKLFMQIAA 247
+N+I + NK D R ++PT++ + FA H M ETSAK +D+VE +FM +A
Sbjct: 138 ANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAH 197
Query: 248 ELMEKLAEKLTIMHDRGVGM 267
+L L+ + D + +
Sbjct: 198 KLKSHKPLMLSQLPDNRISL 217
>UNIPROTKB|F1N908 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0005546 "phosphatidylinositol-4,5-bisphosphate
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005905 "coated pit" evidence=IEA] [GO:0016197 "endosomal
transport" evidence=IEA] [GO:0031253 "cell projection membrane"
evidence=IEA] [GO:0045171 "intercellular bridge" evidence=IEA]
[GO:0045334 "clathrin-coated endocytic vesicle" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
GO:GO:0005905 GO:GO:0016197 GO:GO:0000910 GO:GO:0005546
GO:GO:0045171 GO:GO:0045334 GO:GO:0031253
GeneTree:ENSGT00700000104049 OMA:NCDVVNR EMBL:AADN02043195
EMBL:AADN02043196 IPI:IPI00651222 Ensembl:ENSGALT00000011828
Uniprot:F1N908
Length = 201
Score = 319 (117.4 bits), Expect = 3.1e-33, Sum P(2) = 3.1e-33
Identities = 61/117 (52%), Positives = 82/117 (70%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY LFK++++G++GVGK+ L+ RF F TIGVDF I+TVEIN E++KLQIWD
Sbjct: 4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGDYITTIGVDFKIRTVEINGEKVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR H +I+VYD++ +F + WL EI + V R+LVG
Sbjct: 64 TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVG 119
Score = 76 (31.8 bits), Expect = 3.1e-33, Sum P(2) = 3.1e-33
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 202 NKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK D +R++ TE FA + ++ ETSAK + NVE++F I ++ E L
Sbjct: 120 NKNDDPERKVVETEDAYKFAGQMEIQLFETSAKENINVEEMFNCITELVLRAKKENLAKQ 179
Query: 261 HDR---GVGMLTRIYNIKKAC 278
+ V LT+ KK C
Sbjct: 180 QQQQQNDVVKLTKNSKRKKRC 200
>WB|WBGene00004278 [details] [associations]
symbol:rab-19 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
EMBL:AL132865 KO:K07976 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 OMA:LIGDCGT HSSP:P32939
RefSeq:NP_502576.1 ProteinModelPortal:Q9U1W9 SMR:Q9U1W9
EnsemblMetazoa:Y62E10A.9.1 EnsemblMetazoa:Y62E10A.9.2
EnsemblMetazoa:Y62E10A.9.3 EnsemblMetazoa:Y62E10A.9.4 GeneID:178301
KEGG:cel:CELE_Y62E10A.9 UCSC:Y62E10A.9.2 CTD:178301
WormBase:Y62E10A.9 InParanoid:Q9U1W9 NextBio:900570 Uniprot:Q9U1W9
Length = 210
Score = 369 (135.0 bits), Expect = 3.5e-33, P = 3.5e-33
Identities = 72/162 (44%), Positives = 109/162 (67%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ + +LFK+VLVG+ GVGKTC+V+RF G F QG TIGVDF +KT+ ++ +R+KLQIW
Sbjct: 5 DGFDYLFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIW 64
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DT GQERFR+ITQSYYRSA+ ++L YDI+C+ +F L W+ ++ ++A+ V+++L+G
Sbjct: 65 DTGGQERFRTITQSYYRSANGIVLCYDITCKQSFGSLQRWIDDVSKFAAPNVVKLLIGTK 124
Query: 122 SGLKIVNEM-ASAAGLLCTVDPALATALASDKTDLDEDEHVL 162
L+ + A A +L + A S K +++ D L
Sbjct: 125 CDLEDQRAIEAEEAEMLQRANGMFAMLETSAKGNVNVDNAFL 166
>WB|WBGene00004284 [details] [associations]
symbol:rab-35 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
EMBL:AL117202 HOGENOM:HOG000233968 HSSP:P07560
GeneTree:ENSGT00700000104049 KO:K07876 OMA:NCDVVNR PIR:T31551
RefSeq:NP_499454.1 ProteinModelPortal:Q9U2C3 SMR:Q9U2C3
STRING:Q9U2C3 EnsemblMetazoa:Y47D3A.25.1 EnsemblMetazoa:Y47D3A.25.2
GeneID:176560 KEGG:cel:CELE_Y47D3A.25 UCSC:Y47D3A.25.2 CTD:176560
WormBase:Y47D3A.25 InParanoid:Q9U2C3 NextBio:893084
ArrayExpress:Q9U2C3 Uniprot:Q9U2C3
Length = 209
Score = 315 (115.9 bits), Expect = 4.1e-33, Sum P(2) = 4.1e-33
Identities = 59/117 (50%), Positives = 83/117 (70%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY LFK++++G++GVGK+ L+ RF F TIGVDF I+T++IN +R+KLQIWD
Sbjct: 6 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWD 65
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR H +++VYD++ +F + WL+EIE V +VLVG
Sbjct: 66 TAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNCD-SVQKVLVG 121
Score = 79 (32.9 bits), Expect = 4.1e-33, Sum P(2) = 4.1e-33
Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 185 YLASLEGHSNNIH-CMARNKIDREDREIPTEV-GEDFAKRHDMYYLETSAKASDNVEKLF 242
+L +E + +++ + NK + +R + E ++A+ ++ + ETSAK NVE +F
Sbjct: 104 WLQEIENNCDSVQKVLVGNKCEENERRVVLESDARNYAQSMNISFFETSAKEDKNVEPMF 163
Query: 243 MQIAA-ELMEKLAEKLTIMHDR 263
I + L KLA + D+
Sbjct: 164 TCITSLVLTAKLANPQSASKDQ 185
>UNIPROTKB|F1MSJ9 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045334 "clathrin-coated endocytic vesicle"
evidence=IEA] [GO:0045171 "intercellular bridge" evidence=IEA]
[GO:0031253 "cell projection membrane" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA] [GO:0005905 "coated pit"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0005905 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 GO:GO:0045171 GO:GO:0045334 GO:GO:0031253
GeneTree:ENSGT00700000104049 OMA:NCDVVNR EMBL:DAAA02045445
IPI:IPI01028002 UniGene:Bt.26843 Ensembl:ENSBTAT00000029514
Uniprot:F1MSJ9
Length = 201
Score = 323 (118.8 bits), Expect = 4.8e-33, Sum P(2) = 4.8e-33
Identities = 62/117 (52%), Positives = 82/117 (70%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY LFK+V++G++GVGK+ L+ RF F TIGVDF I+TVEIN E++KLQIWD
Sbjct: 4 DYDHLFKLVIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR H +I+VYD++ +F + WL EI + V R+LVG
Sbjct: 64 TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVG 119
Score = 70 (29.7 bits), Expect = 4.8e-33, Sum P(2) = 4.8e-33
Identities = 25/81 (30%), Positives = 38/81 (46%)
Query: 202 NKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK D +R++ TE FA + + ETSAK + NVE++F I ++ + L
Sbjct: 120 NKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179
Query: 261 HDR---GVGMLTRIYNIKKAC 278
+ V LT+ KK C
Sbjct: 180 QQQQQNDVVKLTKNSKRKKRC 200
>UNIPROTKB|E9PBQ0 [details] [associations]
symbol:RAB43 "Ras-related protein Rab-43" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AC108673
UniGene:Hs.381132 UniGene:Hs.546542 GeneID:339122 KEGG:hsa:339122
CTD:339122 HGNC:HGNC:19983 KO:K07930 GenomeRNAi:339122
NextBio:97235 IPI:IPI01013047 RefSeq:NP_001191816.1
ProteinModelPortal:E9PBQ0 SMR:E9PBQ0 PRIDE:E9PBQ0
Ensembl:ENST00000476465 UCSC:uc010hsy.2 ArrayExpress:E9PBQ0
Bgee:E9PBQ0 Uniprot:E9PBQ0
Length = 155
Score = 367 (134.2 bits), Expect = 5.8e-33, P = 5.8e-33
Identities = 67/117 (57%), Positives = 91/117 (77%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+EI +R+KLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLV 118
DTAGQERFR+ITQSYYRSA+ IL YDI+ + +F + W+ ++ +YA ++++L+
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLI 129
>UNIPROTKB|P59190 [details] [associations]
symbol:RAB15 "Ras-related protein Rab-15" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
EMBL:AL139022 HOGENOM:HOG000233968 CTD:376267 KO:K07908 OMA:HNITETF
EMBL:BC040679 EMBL:BX248046 IPI:IPI00383449 IPI:IPI00394882
RefSeq:NP_941959.1 UniGene:Hs.512492 ProteinModelPortal:P59190
SMR:P59190 IntAct:P59190 STRING:P59190 PhosphoSite:P59190
DMDM:27734452 PaxDb:P59190 PRIDE:P59190 DNASU:376267
Ensembl:ENST00000267512 Ensembl:ENST00000533601 GeneID:376267
KEGG:hsa:376267 UCSC:uc001xhz.2 UCSC:uc021rut.1
GeneCards:GC14M065412 HGNC:HGNC:20150 HPA:HPA041177
neXtProt:NX_P59190 PharmGKB:PA134901572 GenomeRNAi:376267
NextBio:100634 ArrayExpress:P59190 Bgee:P59190 CleanEx:HS_RAB15
Genevestigator:P59190 Uniprot:P59190
Length = 212
Score = 317 (116.6 bits), Expect = 6.4e-33, Sum P(2) = 6.4e-33
Identities = 54/118 (45%), Positives = 87/118 (73%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ Y LF+++L+G++GVGKTCL+ RFT F +TIGVDF +KT+E++ ++++QIW
Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQER+++IT+ YYR A + LVYDIS + ++ + W+ +++EYA V ++L+G
Sbjct: 63 DTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIG 120
Score = 75 (31.5 bits), Expect = 6.4e-33, Sum P(2) = 6.4e-33
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D E R++ E G+ AK + M + ETSA + N+++ F ++ +++ ++L
Sbjct: 121 NKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVLQAHRKEL 177
>RGD|735172 [details] [associations]
symbol:Rab15 "RAB15, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0007269
"neurotransmitter secretion" evidence=TAS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:735172 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0016020
GO:GO:0015031 PROSITE:PS51419 GO:GO:0007269 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104031 CTD:376267 KO:K07908 OMA:HNITETF
OrthoDB:EOG4HDSVG EMBL:M83679 EMBL:BC094954 IPI:IPI00196795
PIR:F42148 RefSeq:NP_942044.1 UniGene:Rn.24234
ProteinModelPortal:P35289 STRING:P35289 PhosphoSite:P35289
PRIDE:P35289 Ensembl:ENSRNOT00000010043 GeneID:299156
KEGG:rno:299156 UCSC:RGD:735172 InParanoid:P35289 NextBio:644892
Genevestigator:P35289 GermOnline:ENSRNOG00000007364 Uniprot:P35289
Length = 212
Score = 317 (116.6 bits), Expect = 6.4e-33, Sum P(2) = 6.4e-33
Identities = 54/118 (45%), Positives = 87/118 (73%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ Y LF+++L+G++GVGKTCL+ RFT F +TIGVDF +KT+E++ ++++QIW
Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQER+++IT+ YYR A + LVYDIS + ++ + W+ +++EYA V ++L+G
Sbjct: 63 DTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIG 120
Score = 75 (31.5 bits), Expect = 6.4e-33, Sum P(2) = 6.4e-33
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D E R++ E G+ AK + M + ETSA + N+++ F ++ +++ ++L
Sbjct: 121 NKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVLQAHRKEL 177
>ZFIN|ZDB-GENE-050809-122 [details] [associations]
symbol:rab33ba "RAB33B, member RAS oncogene family
a" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-050809-122
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 KO:K07920 OMA:PAWIEEC
OrthoDB:EOG4KH2W0 EMBL:AL929007 EMBL:BC100131 IPI:IPI00612051
RefSeq:NP_001028764.1 RefSeq:NP_001155979.1 UniGene:Dr.48575
SMR:Q498P3 Ensembl:ENSDART00000074116 GeneID:572060 GeneID:619200
KEGG:dre:572060 KEGG:dre:619200 CTD:619200 InParanoid:Q498P3
NextBio:20890819 Uniprot:Q498P3
Length = 239
Score = 316 (116.3 bits), Expect = 6.5e-33, Sum P(2) = 6.5e-33
Identities = 60/121 (49%), Positives = 85/121 (70%)
Query: 7 LFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAGQ 66
+FK++++G++GVGKTCL RF G FP ATIGVDF K +EI+ E+IK+Q+WDTAGQ
Sbjct: 26 IFKIIVIGDSGVGKTCLTYRFCAGKFPDKTEATIGVDFREKVIEIDGEKIKVQLWDTAGQ 85
Query: 67 ERFR-SITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYA-SFKVLRVLVGGTSGL 124
ERFR S+ Q YYR+ HA++ VYD++ +F L W+ E ++A +V R+LVG L
Sbjct: 86 ERFRKSMVQHYYRNVHAVVFVYDVTNAASFRSLPAWIEECRQHALGQEVPRILVGNKCDL 145
Query: 125 K 125
+
Sbjct: 146 R 146
Score = 76 (31.8 bits), Expect = 6.5e-33, Sum P(2) = 6.5e-33
Identities = 23/60 (38%), Positives = 31/60 (51%)
Query: 202 NKID-REDREIPTEVGEDFAKRHDMYYLETSAKA-----------SDNVEKLFMQIAAEL 249
NK D R ++ T+V + FA H M ETSAK SD+VE +FM +A +L
Sbjct: 141 NKCDLRHAAQVSTDVAQQFADTHSMPLFETSAKNPYGNEDGTQNNSDHVEAIFMTVAHKL 200
>UNIPROTKB|Q5ZHV1 [details] [associations]
symbol:RAB33B "Ras-related protein Rab-33B" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:2000156 "regulation of retrograde vesicle-mediated transport,
Golgi to ER" evidence=ISS] [GO:2000785 "regulation of autophagic
vacuole assembly" evidence=ISS] [GO:0005796 "Golgi lumen"
evidence=ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139
GO:GO:0015031 GO:GO:0006914 PROSITE:PS51419 GO:GO:0005796
eggNOG:COG1100 GO:GO:2000156 HOVERGEN:HBG009351 GO:GO:2000785
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 EMBL:AJ721033
IPI:IPI00571937 RefSeq:NP_001008466.1 UniGene:Gga.2252 HSSP:O35963
ProteinModelPortal:Q5ZHV1 SMR:Q5ZHV1 PRIDE:Q5ZHV1
Ensembl:ENSGALT00000015926 GeneID:422441 KEGG:gga:422441 CTD:83452
InParanoid:Q5ZHV1 KO:K07920 OMA:PAWIEEC OrthoDB:EOG4KH2W0
NextBio:20825073 Uniprot:Q5ZHV1
Length = 228
Score = 299 (110.3 bits), Expect = 9.7e-33, Sum P(2) = 9.7e-33
Identities = 57/121 (47%), Positives = 83/121 (68%)
Query: 7 LFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAGQ 66
+FK++++G++ VGKTCL RF G FP ATIGVDF + V I+ ERIK+Q+WDTAGQ
Sbjct: 31 IFKIIVIGDSNVGKTCLTYRFCAGRFPQRTEATIGVDFRERAVTIDGERIKIQLWDTAGQ 90
Query: 67 ERFR-SITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYA-SFKVLRVLVGGTSGL 124
ERFR S+ Q YYR+ HA++ VYD++ +F L W+ E +++ + + R+LVG L
Sbjct: 91 ERFRKSMVQHYYRNVHAVVFVYDMTNLASFHSLPSWIEECKQHLLTNDIPRILVGNKCDL 150
Query: 125 K 125
+
Sbjct: 151 R 151
Score = 92 (37.4 bits), Expect = 9.7e-33, Sum P(2) = 9.7e-33
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 193 SNNI-HCMARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKA---SDNVEKLFMQIAA 247
+N+I + NK D R ++PT++ + FA H M ETSAK +D+VE +FM +A
Sbjct: 136 TNDIPRILVGNKCDLRNAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAH 195
Query: 248 EL 249
+L
Sbjct: 196 KL 197
>UNIPROTKB|Q15286 [details] [associations]
symbol:RAB35 "Ras-related protein Rab-35" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0042470 "melanosome" evidence=IEA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0045334 "clathrin-coated endocytic
vesicle" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0008104 "protein localization" evidence=IMP] [GO:0045171
"intercellular bridge" evidence=IDA] [GO:0005905 "coated pit"
evidence=IDA] [GO:0031253 "cell projection membrane" evidence=IDA]
[GO:0005546 "phosphatidylinositol-4,5-bisphosphate binding"
evidence=IDA] [GO:0019003 "GDP binding" evidence=IDA] [GO:0005525
"GTP binding" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0042470 GO:GO:0007264
GO:GO:0008104 GO:GO:0015031 GO:GO:0005768 GO:GO:0003924
GO:GO:0005905 EMBL:CH471054 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
EMBL:AC004812 GO:GO:0045171 HOVERGEN:HBG009351 GO:GO:0045334
PDB:3TW8 PDBsum:3TW8 GO:GO:0031253 HOGENOM:HOG000233968 EMBL:X79781
EMBL:AF498960 EMBL:BT020024 EMBL:CR536486 EMBL:CR541683
EMBL:AK304620 EMBL:AK312538 EMBL:BC015931 IPI:IPI00300096
IPI:IPI00953892 PIR:JC2488 RefSeq:NP_001161078.1 RefSeq:NP_006852.1
UniGene:Hs.524788 ProteinModelPortal:Q15286 SMR:Q15286
IntAct:Q15286 MINT:MINT-1370578 STRING:Q15286 PhosphoSite:Q15286
DMDM:3024525 PaxDb:Q15286 PRIDE:Q15286 DNASU:11021
Ensembl:ENST00000229340 Ensembl:ENST00000534951 GeneID:11021
KEGG:hsa:11021 UCSC:uc001txm.2 CTD:11021 GeneCards:GC12M120532
HGNC:HGNC:9774 MIM:604199 neXtProt:NX_Q15286 PharmGKB:PA34127
InParanoid:Q15286 KO:K07876 OMA:NCDVVNR OrthoDB:EOG4QVCD5
GenomeRNAi:11021 NextBio:41874 ArrayExpress:Q15286 Bgee:Q15286
CleanEx:HS_RAB35 Genevestigator:Q15286 GermOnline:ENSG00000111737
Uniprot:Q15286
Length = 201
Score = 320 (117.7 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 61/117 (52%), Positives = 82/117 (70%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY LFK++++G++GVGK+ L+ RF F TIGVDF I+TVEIN E++KLQIWD
Sbjct: 4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR H +I+VYD++ +F + WL EI + V R+LVG
Sbjct: 64 TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVG 119
Score = 70 (29.7 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 25/81 (30%), Positives = 38/81 (46%)
Query: 202 NKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK D +R++ TE FA + + ETSAK + NVE++F I ++ + L
Sbjct: 120 NKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179
Query: 261 HDR---GVGMLTRIYNIKKAC 278
+ V LT+ KK C
Sbjct: 180 QQQQQNDVVKLTKNSKRKKRC 200
>UNIPROTKB|F2Z4Z0 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045334 "clathrin-coated endocytic vesicle"
evidence=IEA] [GO:0045171 "intercellular bridge" evidence=IEA]
[GO:0031253 "cell projection membrane" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA] [GO:0005905 "coated pit"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0005905 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 GO:GO:0045171 GO:GO:0045334 GO:GO:0031253
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
EMBL:CU062612 RefSeq:NP_001230220.1 UniGene:Ssc.17391
UniGene:Ssc.99380 ProteinModelPortal:F2Z4Z0 SMR:F2Z4Z0 PRIDE:F2Z4Z0
Ensembl:ENSSSCT00000010847 GeneID:100151805 KEGG:ssc:100151805
Uniprot:F2Z4Z0
Length = 201
Score = 320 (117.7 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 61/117 (52%), Positives = 82/117 (70%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY LFK++++G++GVGK+ L+ RF F TIGVDF I+TVEIN E++KLQIWD
Sbjct: 4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR H +I+VYD++ +F + WL EI + V R+LVG
Sbjct: 64 TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVG 119
Score = 70 (29.7 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 25/81 (30%), Positives = 38/81 (46%)
Query: 202 NKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK D +R++ TE FA + + ETSAK + NVE++F I ++ + L
Sbjct: 120 NKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179
Query: 261 HDR---GVGMLTRIYNIKKAC 278
+ V LT+ KK C
Sbjct: 180 QQQQQNDVVKLTKNSKRKKRC 200
>MGI|MGI:1924657 [details] [associations]
symbol:Rab35 "RAB35, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0005525
"GTP binding" evidence=ISO] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005905 "coated pit" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016197 "endosomal
transport" evidence=ISO] [GO:0019003 "GDP binding" evidence=ISO]
[GO:0031253 "cell projection membrane" evidence=ISO] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0045171 "intercellular
bridge" evidence=ISO] [GO:0045334 "clathrin-coated endocytic
vesicle" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:1924657 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0042470 GO:GO:0007264 GO:GO:0015031 GO:GO:0005768
GO:GO:0005905 GO:GO:0016197 GO:GO:0000910 GO:GO:0005546
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003 GO:GO:0045171
HOVERGEN:HBG009351 GO:GO:0045334 GO:GO:0031253 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
OrthoDB:EOG4QVCD5 EMBL:BC056466 IPI:IPI00130489 RefSeq:NP_937806.1
UniGene:Mm.27553 ProteinModelPortal:Q6PHN9 SMR:Q6PHN9 IntAct:Q6PHN9
STRING:Q6PHN9 PhosphoSite:Q6PHN9 PaxDb:Q6PHN9 PRIDE:Q6PHN9
Ensembl:ENSMUST00000031492 GeneID:77407 KEGG:mmu:77407
InParanoid:Q6PHN9 ChiTaRS:RAB35 NextBio:346877 Bgee:Q6PHN9
CleanEx:MM_RAB35 Genevestigator:Q6PHN9
GermOnline:ENSMUSG00000029518 Uniprot:Q6PHN9
Length = 201
Score = 320 (117.7 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 61/117 (52%), Positives = 82/117 (70%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY LFK++++G++GVGK+ L+ RF F TIGVDF I+TVEIN E++KLQIWD
Sbjct: 4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR H +I+VYD++ +F + WL EI + V R+LVG
Sbjct: 64 TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVG 119
Score = 70 (29.7 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 25/81 (30%), Positives = 38/81 (46%)
Query: 202 NKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK D +R++ TE FA + + ETSAK + NVE++F I ++ + L
Sbjct: 120 NKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179
Query: 261 HDR---GVGMLTRIYNIKKAC 278
+ V LT+ KK C
Sbjct: 180 QQQQQNDVVKLTKNSKRKKRC 200
>RGD|1306362 [details] [associations]
symbol:Rab35 "RAB35, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000910 "cytokinesis" evidence=IEA;ISO]
[GO:0005525 "GTP binding" evidence=ISO;ISS] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA;ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005768
"endosome" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0005905 "coated pit" evidence=IEA;ISO]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA;ISO] [GO:0019003 "GDP binding"
evidence=ISO;ISS] [GO:0031253 "cell projection membrane"
evidence=IEA;ISO] [GO:0042470 "melanosome" evidence=IEA]
[GO:0045171 "intercellular bridge" evidence=IEA;ISO] [GO:0045334
"clathrin-coated endocytic vesicle" evidence=IEA;ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:1306362 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0042470 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0005905 GO:GO:0016197
GO:GO:0000910 GO:GO:0005546 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045171 HOVERGEN:HBG009351 GO:GO:0045334
GO:GO:0031253 HOGENOM:HOG000233968 GeneTree:ENSGT00700000104049
CTD:11021 KO:K07876 OrthoDB:EOG4QVCD5 EMBL:BC085769 IPI:IPI00371187
RefSeq:NP_001013064.1 UniGene:Rn.18008 ProteinModelPortal:Q5U316
SMR:Q5U316 STRING:Q5U316 PhosphoSite:Q5U316 PRIDE:Q5U316
Ensembl:ENSRNOT00000030031 GeneID:288700 KEGG:rno:288700
UCSC:RGD:1306362 InParanoid:Q5U316 NextBio:628573
Genevestigator:Q5U316 GermOnline:ENSRNOG00000022014 Uniprot:Q5U316
Length = 201
Score = 320 (117.7 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 61/117 (52%), Positives = 82/117 (70%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY LFK++++G++GVGK+ L+ RF F TIGVDF I+TVEIN E++KLQIWD
Sbjct: 4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR H +I+VYD++ +F + WL EI + V R+LVG
Sbjct: 64 TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVG 119
Score = 70 (29.7 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 25/81 (30%), Positives = 38/81 (46%)
Query: 202 NKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK D +R++ TE FA + + ETSAK + NVE++F I ++ + L
Sbjct: 120 NKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179
Query: 261 HDR---GVGMLTRIYNIKKAC 278
+ V LT+ KK C
Sbjct: 180 QQQQQNDVVKLTKNSKRKKRC 200
>UNIPROTKB|Q1RMR4 [details] [associations]
symbol:RAB15 "Ras-related protein Rab-15" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 HSSP:Q15907 GeneTree:ENSGT00700000104031
EMBL:BC114760 IPI:IPI00701622 RefSeq:NP_001040003.1
UniGene:Bt.12645 ProteinModelPortal:Q1RMR4 PRIDE:Q1RMR4
Ensembl:ENSBTAT00000035769 GeneID:614507 KEGG:bta:614507 CTD:376267
InParanoid:Q1RMR4 KO:K07908 OMA:HNITETF OrthoDB:EOG4HDSVG
NextBio:20899139 Uniprot:Q1RMR4
Length = 212
Score = 317 (116.6 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 54/118 (45%), Positives = 87/118 (73%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ Y LF+++L+G++GVGKTCL+ RFT F +TIGVDF +KT+E++ ++++QIW
Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQER+++IT+ YYR A + LVYDIS + ++ + W+ +++EYA V ++L+G
Sbjct: 63 DTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIG 120
Score = 73 (30.8 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 17/63 (26%), Positives = 35/63 (55%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK D E R++ E G+ A+ + M + ETSA + N+++ F ++ +++ ++L +
Sbjct: 121 NKADEEQKRQVGREQGQQLAREYGMDFYETSACTNLNIKESFTRLTELVLQAHRKELEGL 180
Query: 261 HDR 263
R
Sbjct: 181 RTR 183
>WB|WBGene00004276 [details] [associations]
symbol:rab-14 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005769 "early endosome" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] [GO:0090390
"phagosome acidification involved in apoptotic cell clearance"
evidence=IGI;IMP] [GO:0090387 "phagolysosome assembly involved in
apoptotic cell clearance" evidence=IGI;IMP] [GO:0045335 "phagocytic
vesicle" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0045335
GO:GO:0015031 GO:GO:0005802 GO:GO:0005769 EMBL:Z79601
HOGENOM:HOG000233968 HSSP:P07560 GeneTree:ENSGT00690000101805
KO:K07881 OMA:GVQHKPA GO:GO:0090387 GO:GO:0090390 PIR:T23530
RefSeq:NP_510572.1 ProteinModelPortal:Q93874 SMR:Q93874
EnsemblMetazoa:K09A9.2.1 EnsemblMetazoa:K09A9.2.2 GeneID:181649
KEGG:cel:CELE_K09A9.2 UCSC:K09A9.2.1 CTD:181649 WormBase:K09A9.2
InParanoid:Q93874 NextBio:914820 ArrayExpress:Q93874 Uniprot:Q93874
Length = 210
Score = 290 (107.1 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 51/123 (41%), Positives = 85/123 (69%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y ++FK +++G+ GVGK+CL+ +FT+ F TIGV+F + +E++ ++IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR++T+SYYR A ++VYDI+ + T++ L+ WL + + + L+G +
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLADAKSLTNPNTAIFLIGNKA 126
Query: 123 GLK 125
L+
Sbjct: 127 DLE 129
Score = 101 (40.6 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAE 255
NK D ED R++P E + FA+ + + +LE SAK NVE F++ A ++ + + +
Sbjct: 124 NKADLEDQRDVPYEEAKAFAEENGLTFLECSAKTGSNVEDAFLETAKQIYQNIQD 178
>MGI|MGI:1916865 [details] [associations]
symbol:Rab15 "RAB15, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1916865
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4HDSVG EMBL:BC027769
IPI:IPI00170032 UniGene:Mm.172847 ProteinModelPortal:Q8K386
SMR:Q8K386 IntAct:Q8K386 STRING:Q8K386 PhosphoSite:Q8K386
PaxDb:Q8K386 PRIDE:Q8K386 InParanoid:Q8K386 CleanEx:MM_RAB15
Genevestigator:Q8K386 GermOnline:ENSMUSG00000021062 Uniprot:Q8K386
Length = 212
Score = 314 (115.6 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
Identities = 53/118 (44%), Positives = 87/118 (73%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ Y LF+++L+G++GVGKTCL+ RFT F +TIGVDF +KT++++ ++++QIW
Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIDVDGIKVRIQIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQER+++IT+ YYR A + LVYDIS + ++ + W+ +++EYA V ++L+G
Sbjct: 63 DTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIG 120
Score = 76 (31.8 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
Identities = 18/63 (28%), Positives = 35/63 (55%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK D E R++ E G+ AK + M + ETSA + N+++ F ++ +++ ++L +
Sbjct: 121 NKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVLQAHRKELDGL 180
Query: 261 HDR 263
R
Sbjct: 181 RTR 183
>MGI|MGI:103292 [details] [associations]
symbol:Rab19 "RAB19, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:103292
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 CTD:401409
OMA:RNSLHLY OrthoDB:EOG4WQ13N EMBL:X80473 EMBL:AB232613
EMBL:BC032936 EMBL:M79309 IPI:IPI00116775 PIR:JH0649 PIR:PC4012
RefSeq:NP_035356.1 UniGene:Mm.123866 ProteinModelPortal:P35294
SMR:P35294 PhosphoSite:P35294 PRIDE:P35294
Ensembl:ENSMUST00000031986 GeneID:19331 KEGG:mmu:19331
UCSC:uc009blp.1 InParanoid:P35294 NextBio:296311 Bgee:P35294
CleanEx:MM_RAB19 Genevestigator:P35294
GermOnline:ENSMUSG00000029923 Uniprot:P35294
Length = 217
Score = 364 (133.2 bits), Expect = 1.2e-32, P = 1.2e-32
Identities = 77/185 (41%), Positives = 116/185 (62%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E+ +LFKV+L+G++ VGKTC+V+ F GV+ Q TIGVDF ++++EI+ +++K+Q+W
Sbjct: 12 ENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNK 131
Query: 122 SGL-KIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARN 180
S L + + + A L LA S K + DE VFV + +ARN
Sbjct: 132 SDLWEKRHVLFEDACTLAEKHGLLAVLETSAKESRNIDE--------VFVLMAKELIARN 183
Query: 181 EACFY 185
Y
Sbjct: 184 SLHLY 188
>FB|FBgn0015791 [details] [associations]
symbol:Rab14 "Rab14" species:7227 "Drosophila melanogaster"
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AE014134 GO:GO:0015031
GO:GO:0003924 HSSP:P07560 CTD:51552 GeneTree:ENSGT00690000101805
KO:K07881 OMA:GVQHKPA ChiTaRS:RAB14 UniGene:Dm.6742 GeneID:34840
KEGG:dme:Dmel_CG4212 FlyBase:FBgn0015791 GenomeRNAi:34840
NextBio:790484 RefSeq:NP_788056.1 ProteinModelPortal:Q86BK8
SMR:Q86BK8 STRING:Q86BK8 PRIDE:Q86BK8 EnsemblMetazoa:FBtr0080627
UCSC:CG4212-RB InParanoid:Q86BK8 PhylomeDB:Q86BK8
ArrayExpress:Q86BK8 Bgee:Q86BK8 Uniprot:Q86BK8
Length = 239
Score = 299 (110.3 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 53/128 (41%), Positives = 88/128 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y ++FK +++G+ GVGK+CL+ +FT+ F TIGV+F + +E+++++IKLQIWD
Sbjct: 31 NYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWD 90
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR++T+SYYR A ++VYDI+ + T++ L+ WL + + + L+G S
Sbjct: 91 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKS 150
Query: 123 GLKIVNEM 130
L+ E+
Sbjct: 151 DLESTREV 158
Score = 91 (37.1 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAE 255
NK D E RE+ E ++FA + + +LE SA NVE+ F++ A ++ + + E
Sbjct: 148 NKSDLESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQE 202
>UNIPROTKB|J9PAQ4 [details] [associations]
symbol:RAB4B "Ras-related protein Rab-4B" species:9615
"Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101805 EMBL:AAEX03000940
Ensembl:ENSCAFT00000047873 Uniprot:J9PAQ4
Length = 224
Score = 301 (111.0 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 56/123 (45%), Positives = 80/123 (65%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK +++G+AG GK+CL+ +F + F TIGV+F + V + + +KLQIW
Sbjct: 15 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIW 74
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFRS+T+SYYR A +LVYDI+ + T++ L WL + AS ++ +L G
Sbjct: 75 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNK 134
Query: 122 SGL 124
L
Sbjct: 135 KDL 137
Score = 88 (36.0 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 194 NNIHCMARNKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
N + + NK D + +RE+ FA+ +++ +LETSA +NVE+ F++ A ++ K
Sbjct: 125 NIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNK 184
Query: 253 L 253
+
Sbjct: 185 I 185
>UNIPROTKB|P61017 [details] [associations]
symbol:RAB4B "Ras-related protein Rab-4B" species:9615
"Canis lupus familiaris" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OrthoDB:EOG4WM4VM
EMBL:X56389 PIR:F36364 RefSeq:NP_001003275.1 UniGene:Cfa.3813
ProteinModelPortal:P61017 SMR:P61017 PRIDE:P61017 GeneID:403956
KEGG:cfa:403956 CTD:53916 InParanoid:P61017 KO:K07880
NextBio:20817446 Uniprot:P61017
Length = 213
Score = 301 (111.0 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 56/123 (45%), Positives = 80/123 (65%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK +++G+AG GK+CL+ +F + F TIGV+F + V + + +KLQIW
Sbjct: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFRS+T+SYYR A +LVYDI+ + T++ L WL + AS ++ +L G
Sbjct: 63 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNK 122
Query: 122 SGL 124
L
Sbjct: 123 KDL 125
Score = 88 (36.0 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 194 NNIHCMARNKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
N + + NK D + +RE+ FA+ +++ +LETSA +NVE+ F++ A ++ K
Sbjct: 113 NIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNK 172
Query: 253 L 253
+
Sbjct: 173 I 173
>UNIPROTKB|P61018 [details] [associations]
symbol:RAB4B "Ras-related protein Rab-4B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0016192 "vesicle-mediated transport" evidence=NAS] [GO:0005622
"intracellular" evidence=NAS] [GO:0006184 "GTP catabolic process"
evidence=NAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0005622 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
UniGene:Hs.631539 UniGene:Hs.730737 GermOnline:ENSG00000167578
HOGENOM:HOG000233968 OrthoDB:EOG4WM4VM CTD:53916 KO:K07880
EMBL:AF087861 EMBL:AF165522 EMBL:AF217985 EMBL:AF498935
EMBL:BC046927 IPI:IPI00187143 IPI:IPI00477489 RefSeq:NP_057238.3
PDB:2O52 PDBsum:2O52 ProteinModelPortal:P61018 SMR:P61018
STRING:P61018 PhosphoSite:P61018 DMDM:46577635 PaxDb:P61018
PRIDE:P61018 DNASU:53916 Ensembl:ENST00000357052 GeneID:53916
KEGG:hsa:53916 UCSC:uc002opd.2 UCSC:uc002opf.2
GeneCards:GC19P041284 HGNC:HGNC:9782 MIM:612945 neXtProt:NX_P61018
PharmGKB:PA34142 InParanoid:P61018 OMA:SPNIVIL
EvolutionaryTrace:P61018 GenomeRNAi:53916 NextBio:56222
ArrayExpress:P61018 Bgee:P61018 CleanEx:HS_RAB4B
Genevestigator:P61018 Uniprot:P61018
Length = 213
Score = 301 (111.0 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 56/123 (45%), Positives = 80/123 (65%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK +++G+AG GK+CL+ +F + F TIGV+F + V + + +KLQIW
Sbjct: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFRS+T+SYYR A +LVYDI+ + T++ L WL + AS ++ +L G
Sbjct: 63 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNK 122
Query: 122 SGL 124
L
Sbjct: 123 KDL 125
Score = 88 (36.0 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 194 NNIHCMARNKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
N + + NK D + +RE+ FA+ +++ +LETSA +NVE+ F++ A ++ K
Sbjct: 113 NIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNK 172
Query: 253 L 253
+
Sbjct: 173 I 173
>UNIPROTKB|F2Z507 [details] [associations]
symbol:RAB4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00690000101805 KO:K07880 OMA:SPNIVIL
EMBL:FP325213 RefSeq:XP_003127192.1 RefSeq:XP_003481903.1
ProteinModelPortal:F2Z507 SMR:F2Z507 PRIDE:F2Z507
Ensembl:ENSSSCT00000003328 GeneID:100523381 KEGG:ssc:100523381
Uniprot:F2Z507
Length = 213
Score = 301 (111.0 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 56/123 (45%), Positives = 80/123 (65%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK +++G+AG GK+CL+ +F + F TIGV+F + V + + +KLQIW
Sbjct: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFRS+T+SYYR A +LVYDI+ + T++ L WL + AS ++ +L G
Sbjct: 63 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNK 122
Query: 122 SGL 124
L
Sbjct: 123 KDL 125
Score = 88 (36.0 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 194 NNIHCMARNKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
N + + NK D + +RE+ FA+ +++ +LETSA +NVE+ F++ A ++ K
Sbjct: 113 NIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNK 172
Query: 253 L 253
+
Sbjct: 173 I 173
>MGI|MGI:105071 [details] [associations]
symbol:Rab4b "RAB4B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:105071 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101805 OrthoDB:EOG4WM4VM CTD:53916 KO:K07880
OMA:SPNIVIL EMBL:AF408432 EMBL:AK005314 EMBL:BC007147
IPI:IPI00271059 RefSeq:NP_083667.1 UniGene:Mm.482114
ProteinModelPortal:Q91ZR1 SMR:Q91ZR1 STRING:Q91ZR1 PRIDE:Q91ZR1
Ensembl:ENSMUST00000093040 GeneID:19342 KEGG:mmu:19342
InParanoid:Q91ZR1 NextBio:296351 Bgee:Q91ZR1 Genevestigator:Q91ZR1
GermOnline:ENSMUSG00000053291 Uniprot:Q91ZR1
Length = 213
Score = 301 (111.0 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 56/123 (45%), Positives = 80/123 (65%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK +++G+AG GK+CL+ +F + F TIGV+F + V + + +KLQIW
Sbjct: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFRS+T+SYYR A +LVYDI+ + T++ L WL + AS ++ +L G
Sbjct: 63 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNK 122
Query: 122 SGL 124
L
Sbjct: 123 KDL 125
Score = 88 (36.0 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 194 NNIHCMARNKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
N + + NK D + +RE+ FA+ +++ +LETSA +NVE+ F++ A ++ K
Sbjct: 113 NIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNK 172
Query: 253 L 253
+
Sbjct: 173 I 173
>RGD|620931 [details] [associations]
symbol:Rab4b "RAB4B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:620931 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101805 OrthoDB:EOG4WM4VM CTD:53916 KO:K07880
OMA:SPNIVIL EMBL:X78605 IPI:IPI00199224 PIR:S58279
RefSeq:NP_059051.1 UniGene:Rn.7181 ProteinModelPortal:P51146
SMR:P51146 STRING:P51146 PRIDE:P51146 Ensembl:ENSRNOT00000002052
GeneID:50866 KEGG:rno:50866 UCSC:RGD:620931 InParanoid:P51146
NextBio:610586 ArrayExpress:P51146 Genevestigator:P51146
GermOnline:ENSRNOG00000001500 Uniprot:P51146
Length = 213
Score = 301 (111.0 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 56/123 (45%), Positives = 80/123 (65%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK +++G+AG GK+CL+ +F + F TIGV+F + V + + +KLQIW
Sbjct: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFRS+T+SYYR A +LVYDI+ + T++ L WL + AS ++ +L G
Sbjct: 63 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNK 122
Query: 122 SGL 124
L
Sbjct: 123 KDL 125
Score = 88 (36.0 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 194 NNIHCMARNKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
N + + NK D + +RE+ FA+ +++ +LETSA +NVE+ F++ A ++ K
Sbjct: 113 NIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNK 172
Query: 253 L 253
+
Sbjct: 173 I 173
>UNIPROTKB|P51146 [details] [associations]
symbol:Rab4b "Ras-related protein Rab-4B" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:620931 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101805 OrthoDB:EOG4WM4VM CTD:53916 KO:K07880
OMA:SPNIVIL EMBL:X78605 IPI:IPI00199224 PIR:S58279
RefSeq:NP_059051.1 UniGene:Rn.7181 ProteinModelPortal:P51146
SMR:P51146 STRING:P51146 PRIDE:P51146 Ensembl:ENSRNOT00000002052
GeneID:50866 KEGG:rno:50866 UCSC:RGD:620931 InParanoid:P51146
NextBio:610586 ArrayExpress:P51146 Genevestigator:P51146
GermOnline:ENSRNOG00000001500 Uniprot:P51146
Length = 213
Score = 301 (111.0 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 56/123 (45%), Positives = 80/123 (65%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E Y FLFK +++G+AG GK+CL+ +F + F TIGV+F + V + + +KLQIW
Sbjct: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIW 62
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFRS+T+SYYR A +LVYDI+ + T++ L WL + AS ++ +L G
Sbjct: 63 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNK 122
Query: 122 SGL 124
L
Sbjct: 123 KDL 125
Score = 88 (36.0 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 194 NNIHCMARNKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
N + + NK D + +RE+ FA+ +++ +LETSA +NVE+ F++ A ++ K
Sbjct: 113 NIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNK 172
Query: 253 L 253
+
Sbjct: 173 I 173
>UNIPROTKB|E1C8J9 [details] [associations]
symbol:RAB3B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IEA] [GO:0018125 "peptidyl-cysteine methylation"
evidence=IEA] [GO:0030141 "secretory granule" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0008021
GO:GO:0030141 GO:GO:0017157 GO:GO:0018125
GeneTree:ENSGT00690000101942 CTD:5865 KO:K06108 OMA:PPSQQNC
EMBL:AADN02012575 IPI:IPI00598636 RefSeq:XP_422470.2
UniGene:Gga.9853 Ensembl:ENSGALT00000017197 GeneID:424636
KEGG:gga:424636 NextBio:20826946 Uniprot:E1C8J9
Length = 219
Score = 294 (108.6 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 51/118 (43%), Positives = 83/118 (70%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F +T+G+DF +KTV N++R+KLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTSAFVSTVGIDFKVKTVYRNDKRVKLQIW 76
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW +I+ Y+ +LVG
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFILMYDITSEDSFNAVQDWATQIKTYSWDNAQVILVG 134
Score = 95 (38.5 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK D ED R IP E G+ A + Y E SAK + NV ++F ++ + EK++E +
Sbjct: 135 NKCDMEDERIIPLEKGKHLADQLGFDYFEASAKENINVRQVFERLVDIICEKMSESIESD 194
Query: 261 HDRG 264
RG
Sbjct: 195 PSRG 198
>UNIPROTKB|Q2HJI8 [details] [associations]
symbol:RAB8B "Ras-related protein Rab-8B" species:9913 "Bos
taurus" [GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0019003
"GDP binding" evidence=ISS] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6
HSSP:P55258 EMBL:BC105330 IPI:IPI00693636 RefSeq:NP_001069785.1
UniGene:Bt.38707 ProteinModelPortal:Q2HJI8 SMR:Q2HJI8 PRIDE:Q2HJI8
GeneID:614242 KEGG:bta:614242 CTD:51762 InParanoid:Q2HJI8 KO:K07902
NextBio:20899012 Uniprot:Q2HJI8
Length = 207
Score = 362 (132.5 bits), Expect = 2.0e-32, P = 2.0e-32
Identities = 68/156 (43%), Positives = 109/156 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + AS K+ ++ +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLEASAKSSMNVEE 160
Score = 120 (47.3 bits), Expect = 0.00010, P = 0.00010
Identities = 30/85 (35%), Positives = 49/85 (57%)
Query: 185 YLASLEGH-SNNIHCMAR-NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
++ ++E H S+++ M NK D D R++ E GE A + + +LE SAK+S NVE+
Sbjct: 102 WIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLEASAKSSMNVEEA 161
Query: 242 FMQIAAELMEKLAEKLTIMHDRGVG 266
F +A ++M KL K+ + G G
Sbjct: 162 FFTLARDIMTKLNRKMNDSNSSGAG 186
>DICTYBASE|DDB_G0287211 [details] [associations]
symbol:rab11B "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA;ISS] [GO:0005525 "GTP binding"
evidence=IEA;ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0000166 "nucleotide binding" evidence=IEA;ISS] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0287211 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GenomeReviews:CM000154_GR PROSITE:PS51419 eggNOG:COG1100
EMBL:AAFI02000099 KO:K07976 HSSP:Q15907 OMA:ISRRSTF EMBL:AF037357
RefSeq:XP_637328.1 ProteinModelPortal:Q54KM9 SMR:Q54KM9
PRIDE:Q54KM9 EnsemblProtists:DDB0191421 GeneID:8626026
KEGG:ddi:DDB_G0287211 Uniprot:Q54KM9
Length = 220
Score = 293 (108.2 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 57/133 (42%), Positives = 93/133 (69%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +L K+V++G++GVGK+ L+ R+ + F G+ +TIGV+F KT++I+N+ IKLQ+WD
Sbjct: 7 EYDYLCKIVVIGDSGVGKSNLLSRYNKNEFSVGKLSTIGVEFSTKTLKIDNKLIKLQLWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQE++ SIT+SYY+ A ++VY+I+ + +F+ L WL++ E A +LVG S
Sbjct: 67 TAGQEKYNSITESYYKGAIGALIVYNIADRNSFNNLEKWLKKFRENAHQDYGIMLVGNKS 126
Query: 123 GLKIVNEMASAAG 135
LK E+++ G
Sbjct: 127 DLKEYREVSTLEG 139
Score = 95 (38.5 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 202 NKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK D +E RE+ T G+ FA++H M ++ETSA S+NVE F + + L + T+
Sbjct: 124 NKSDLKEYREVSTLEGKQFAEKHYMQFIETSALDSNNVETAFNNLFNFIYYSLFKNKTMT 183
Query: 261 HD 262
D
Sbjct: 184 LD 185
>FB|FBgn0015793 [details] [associations]
symbol:Rab19 "Rab19" species:7227 "Drosophila melanogaster"
[GO:0005525 "GTP binding" evidence=ISS] [GO:0005097 "Rab GTPase
activator activity" evidence=ISS] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AE014296 GO:GO:0015031
eggNOG:COG1100 GO:GO:0005097 KO:K07976 HSSP:P07560
GeneTree:ENSGT00700000104044 OMA:LIGDCGT EMBL:AY071400 EMBL:D84348
RefSeq:NP_523970.1 UniGene:Dm.2555 SMR:O18339
EnsemblMetazoa:FBtr0076705 EnsemblMetazoa:FBtr0331832 GeneID:38930
KEGG:dme:Dmel_CG7062 UCSC:CG7062-RA CTD:38930 FlyBase:FBgn0015793
InParanoid:O18339 OrthoDB:EOG4PG4GW GenomeRNAi:38930 NextBio:811064
Uniprot:O18339
Length = 219
Score = 361 (132.1 bits), Expect = 2.6e-32, P = 2.6e-32
Identities = 72/165 (43%), Positives = 102/165 (61%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E + FLFK+VL+G+ G GKTC+V RF G + G TIGVDF +KT+ + ++IKLQIW
Sbjct: 16 EHFDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIW 75
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSA+ +++VYDI+ + +F L W+ E+ Y + VL +LVG
Sbjct: 76 DTAGQERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNK 135
Query: 122 SGLKIVNEMA-SAAGLLCTVDPALATALASDKTDLDEDEHVLACL 165
L+ E+ A +C P + + + + E CL
Sbjct: 136 CDLEEQREVDFEEARQMCQYIPEILFVMETSAKENMNVEDAFRCL 180
>DICTYBASE|DDB_G0283757 [details] [associations]
symbol:rab1A "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0283757 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GenomeReviews:CM000153_GR GO:GO:0015031 PROSITE:PS51419
EMBL:AAFI02000057 eggNOG:COG1100 KO:K07874 EMBL:L21009
RefSeq:XP_638915.1 ProteinModelPortal:P34139 SMR:P34139
PRIDE:P34139 EnsemblProtists:DDB0191476 GeneID:8624312
KEGG:ddi:DDB_G0283757 OMA:NRVGPPS ProtClustDB:CLSZ2430337
Uniprot:P34139
Length = 202
Score = 360 (131.8 bits), Expect = 3.3e-32, P = 3.3e-32
Identities = 73/158 (46%), Positives = 109/158 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E+N + IKLQIWD
Sbjct: 4 DYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + TF+ + WL+EI+ +A V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKS 123
Query: 123 GL--KIVNEMASAAGLLCTVD-PALATALASDKTDLDE 157
L K V + +A ++ P L T+ A T++++
Sbjct: 124 DLVAKKVVDFNTAKAFADSLQIPFLETS-AKQSTNVEQ 160
>UNIPROTKB|A4D1S5 [details] [associations]
symbol:RAB19 "Ras-related protein Rab-19" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 EMBL:CH236950
eggNOG:COG1100 HOVERGEN:HBG009351 EMBL:AC069335
HOGENOM:HOG000233968 CTD:401409 OMA:RNSLHLY EMBL:AC093087
EMBL:BC140796 EMBL:AF091033 IPI:IPI00478209 IPI:IPI00923598
RefSeq:NP_001008749.2 UniGene:Hs.583545 ProteinModelPortal:A4D1S5
SMR:A4D1S5 STRING:A4D1S5 PhosphoSite:A4D1S5 PRIDE:A4D1S5
Ensembl:ENST00000275874 Ensembl:ENST00000356407
Ensembl:ENST00000537763 GeneID:401409 KEGG:hsa:401409
UCSC:uc010lni.2 GeneCards:GC07P140103 HGNC:HGNC:19982 HPA:HPA051077
neXtProt:NX_A4D1S5 PharmGKB:PA162400617 GenomeRNAi:401409
NextBio:106817 ArrayExpress:A4D1S5 Bgee:A4D1S5 CleanEx:HS_RAB19
Genevestigator:A4D1S5 Uniprot:A4D1S5
Length = 217
Score = 360 (131.8 bits), Expect = 3.3e-32, P = 3.3e-32
Identities = 73/184 (39%), Positives = 116/184 (63%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFK++L+G++ VGKTC+V+ F GV+ Q TIGVDF +++++I+ +++K+Q+W
Sbjct: 12 ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + V+ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNK 131
Query: 122 SGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVFVAVCIPKLARNE 181
L + CT+ LA +T E +++ VFV + +ARN
Sbjct: 132 CDLWEKRHVLFEDA--CTLAEKYGL-LAVLETSAKESKNIEE----VFVLMAKELIARNS 184
Query: 182 ACFY 185
Y
Sbjct: 185 LHLY 188
>UNIPROTKB|F1SRP6 [details] [associations]
symbol:RAB19 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104044 EMBL:CU655865
Ensembl:ENSSSCT00000017963 OMA:ESISHWI Uniprot:F1SRP6
Length = 143
Score = 360 (131.8 bits), Expect = 3.3e-32, P = 3.3e-32
Identities = 61/118 (51%), Positives = 93/118 (78%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
E++ +LFKV+LVG++ VGKTC+V+ F GV+ Q TIGVDF ++ +EI+ +++K+Q+W
Sbjct: 12 ENFDYLFKVILVGDSNVGKTCVVQHFKSGVYTEAQQNTIGVDFTVRALEIDGKKVKMQVW 71
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQERFR+ITQSYYRSAHA I+ YD++ + TF+ + W+ EIE+Y + ++ +L+G
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIG 129
>UNIPROTKB|E1BNX1 [details] [associations]
symbol:RAB3D "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042588 "zymogen granule" evidence=IEA] [GO:0018125
"peptidyl-cysteine methylation" evidence=IEA] [GO:0017157
"regulation of exocytosis" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0017157 GO:GO:0042588 GO:GO:0018125
GeneTree:ENSGT00690000101942 CTD:9545 KO:K07884 OMA:GKGPTLG
EMBL:DAAA02019486 IPI:IPI00709014 RefSeq:NP_001178304.1
UniGene:Bt.20052 Ensembl:ENSBTAT00000002783 GeneID:100139105
KEGG:bta:100139105 NextBio:20790194 Uniprot:E1BNX1
Length = 219
Score = 295 (108.9 bits), Expect = 4.3e-32, Sum P(2) = 4.3e-32
Identities = 53/124 (42%), Positives = 85/124 (68%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++L+GN+ VGKT + R+ F P +T+G+DF +KTV +++RIKLQIW
Sbjct: 17 QNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIW 76
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQER+R+IT +YYR A +L+YD++ Q +F + DW +I+ Y+ +LVG
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFLLMYDVANQESFAAVQDWATQIKTYSWDNAQVILVGNK 136
Query: 122 SGLK 125
L+
Sbjct: 137 CDLE 140
Score = 90 (36.7 bits), Expect = 4.3e-32, Sum P(2) = 4.3e-32
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D ED R +PTE G A + E SAK + NV+++F ++ + EK+ E L
Sbjct: 135 NKCDLEDERVVPTEEGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESL 191
>FB|FBgn0031090 [details] [associations]
symbol:Rab35 "Rab35" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0006911 GO:GO:0005811
GO:GO:0015031 EMBL:AE014298 GO:GO:0000910 HSSP:P07560
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
ChiTaRS:RAB35 FlyBase:FBgn0031090 EMBL:AY094795
RefSeq:NP_001188678.1 RefSeq:NP_608373.1 UniGene:Dm.3622 SMR:Q9W5X0
EnsemblMetazoa:FBtr0070028 EnsemblMetazoa:FBtr0303258
EnsemblMetazoa:FBtr0333549 GeneID:33014 KEGG:dme:Dmel_CG9575
UCSC:CG9575-RA InParanoid:Q9W5X0 GenomeRNAi:33014 NextBio:781524
Uniprot:Q9W5X0
Length = 201
Score = 291 (107.5 bits), Expect = 4.4e-32, Sum P(2) = 4.4e-32
Identities = 57/116 (49%), Positives = 80/116 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
+ LFK++++G++GVGK+ L+ RF+ F TIGVDF I+TV+I R+KLQIWDT
Sbjct: 5 FDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR H +I+VYD++ +F + WL EI+ V +VLVG
Sbjct: 65 AGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDV-VKKVLVG 119
Score = 94 (38.1 bits), Expect = 4.4e-32, Sum P(2) = 4.4e-32
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 202 NKIDREDREIP-TEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELME 251
NK D DR++ TE + FAK+ D+ ETSAK + NVE +F+ I ++++
Sbjct: 120 NKNDDPDRKVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLD 170
>GENEDB_PFALCIPARUM|PF08_0110 [details] [associations]
symbol:rab18 "PfRab18, GTPase" species:5833
"Plasmodium falciparum" [GO:0003924 "GTPase activity" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0003924
EMBL:AL844507 HOGENOM:HOG000233968 KO:K07910
GenomeReviews:AL844507_GR RefSeq:XP_001349449.1 HSSP:P10114
ProteinModelPortal:Q7K6B0 EnsemblProtists:PF08_0110:mRNA
GeneID:2655310 KEGG:pfa:PF08_0110 EuPathDB:PlasmoDB:PF3D7_0807300
OMA:PNISATI ProtClustDB:CLSZ2433229 Uniprot:Q7K6B0
Length = 201
Score = 290 (107.1 bits), Expect = 4.5e-32, Sum P(2) = 4.5e-32
Identities = 53/116 (45%), Positives = 88/116 (75%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +L K++LVG++ VGK+ ++ R++ F +TIG+DF +K ++I+N+ IK+ IWDT
Sbjct: 7 YDYLLKLLLVGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTIKVGIWDT 66
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFK-VLRVLV 118
AGQERFR++T +YYR+AHA+ILVYD + + +F+ L W+ EI++Y++ K +++LV
Sbjct: 67 AGQERFRTLTSAYYRNAHAIILVYDCTVRESFENLDVWINEIDKYSTNKNAIKMLV 122
Score = 95 (38.5 bits), Expect = 4.5e-32, Sum P(2) = 4.5e-32
Identities = 18/59 (30%), Positives = 35/59 (59%)
Query: 192 HSNNIHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELM 250
+ N I + NKID+ + E+ + G++FA ++M + ETSAK N+ F ++ +++
Sbjct: 114 NKNAIKMLVANKIDKPNHEVTKDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQIL 172
>UNIPROTKB|Q7K6B0 [details] [associations]
symbol:rab18 "PfRab18, GTPase" species:36329 "Plasmodium
falciparum 3D7" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0003924
EMBL:AL844507 HOGENOM:HOG000233968 KO:K07910
GenomeReviews:AL844507_GR RefSeq:XP_001349449.1 HSSP:P10114
ProteinModelPortal:Q7K6B0 EnsemblProtists:PF08_0110:mRNA
GeneID:2655310 KEGG:pfa:PF08_0110 EuPathDB:PlasmoDB:PF3D7_0807300
OMA:PNISATI ProtClustDB:CLSZ2433229 Uniprot:Q7K6B0
Length = 201
Score = 290 (107.1 bits), Expect = 4.5e-32, Sum P(2) = 4.5e-32
Identities = 53/116 (45%), Positives = 88/116 (75%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +L K++LVG++ VGK+ ++ R++ F +TIG+DF +K ++I+N+ IK+ IWDT
Sbjct: 7 YDYLLKLLLVGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTIKVGIWDT 66
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFK-VLRVLV 118
AGQERFR++T +YYR+AHA+ILVYD + + +F+ L W+ EI++Y++ K +++LV
Sbjct: 67 AGQERFRTLTSAYYRNAHAIILVYDCTVRESFENLDVWINEIDKYSTNKNAIKMLV 122
Score = 95 (38.5 bits), Expect = 4.5e-32, Sum P(2) = 4.5e-32
Identities = 18/59 (30%), Positives = 35/59 (59%)
Query: 192 HSNNIHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELM 250
+ N I + NKID+ + E+ + G++FA ++M + ETSAK N+ F ++ +++
Sbjct: 114 NKNAIKMLVANKIDKPNHEVTKDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQIL 172
>ZFIN|ZDB-GENE-041210-268 [details] [associations]
symbol:rab3ab "RAB3A, member RAS oncogene family,
b" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-041210-268
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101942 EMBL:BX936438 IPI:IPI00515876
ProteinModelPortal:F1QVZ4 Ensembl:ENSDART00000124350 Bgee:F1QVZ4
Uniprot:F1QVZ4
Length = 287
Score = 300 (110.7 bits), Expect = 5.2e-32, Sum P(2) = 5.2e-32
Identities = 55/134 (41%), Positives = 89/134 (66%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F P +T+G+DF +KT+ N++RIKLQIW
Sbjct: 84 QNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIW 143
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQER+R+IT +YYR A IL+YDI+ + +F + DW +I+ Y+ +LVG
Sbjct: 144 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFAAVQDWSTQIKTYSWDNAQVLLVGNK 203
Query: 122 SGLKIVNEMASAAG 135
++ +AS G
Sbjct: 204 CDMEDERVVASERG 217
Score = 84 (34.6 bits), Expect = 5.2e-32, Sum P(2) = 5.2e-32
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D ED R + +E G ++ Y E SAK + NV++ F ++ + EK++E L
Sbjct: 202 NKCDMEDERVVASERGRQLSEHLGFEYFEASAKDNINVKQTFERLVDIICEKMSESL 258
>UNIPROTKB|F1S5W6 [details] [associations]
symbol:RAB3D "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042588 "zymogen granule" evidence=IEA] [GO:0018125
"peptidyl-cysteine methylation" evidence=IEA] [GO:0017157
"regulation of exocytosis" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0017157 GO:GO:0042588 GO:GO:0018125
GeneTree:ENSGT00690000101942 OMA:GKGPTLG EMBL:CU855518
Ensembl:ENSSSCT00000014878 Uniprot:F1S5W6
Length = 227
Score = 295 (108.9 bits), Expect = 5.5e-32, Sum P(2) = 5.5e-32
Identities = 54/124 (43%), Positives = 85/124 (68%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++L+GN+ VGKT + R+ F P +T+G+DF +KTV +++RIKLQIW
Sbjct: 25 QNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIW 84
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQER+R+IT +YYR A +L+YDI+ Q +F + DW +I+ Y+ +LVG
Sbjct: 85 DTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWSTQIKTYSWDNAQVILVGNK 144
Query: 122 SGLK 125
L+
Sbjct: 145 CDLE 148
Score = 89 (36.4 bits), Expect = 5.5e-32, Sum P(2) = 5.5e-32
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D ED R +PTE G A + E SAK + NV+++F ++ + EK+ E L
Sbjct: 143 NKCDLEDERVVPTEEGRRLADDLGFEFFEASAKENINVKQVFERLVDIICEKMNESL 199
>UNIPROTKB|F1N2J9 [details] [associations]
symbol:RAB8B "Ras-related protein Rab-8B" species:9913 "Bos
taurus" [GO:0045046 "protein import into peroxisome membrane"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0005778 GO:GO:0045046 GeneTree:ENSGT00700000104031
OMA:TSFFRCL IPI:IPI00693636 UniGene:Bt.38707 EMBL:DAAA02028749
PRIDE:F1N2J9 Ensembl:ENSBTAT00000014802 Uniprot:F1N2J9
Length = 207
Score = 358 (131.1 bits), Expect = 5.5e-32, P = 5.5e-32
Identities = 67/156 (42%), Positives = 108/156 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ ++ +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSMNVEE 160
Score = 125 (49.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 31/85 (36%), Positives = 50/85 (58%)
Query: 185 YLASLEGH-SNNIHCMAR-NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
++ ++E H S+++ M NK D D R++ E GE A + + +LETSAK+S NVE+
Sbjct: 102 WIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSMNVEEA 161
Query: 242 FMQIAAELMEKLAEKLTIMHDRGVG 266
F +A ++M KL K+ + G G
Sbjct: 162 FFTLARDIMTKLNRKMNDSNSSGAG 186
>UNIPROTKB|E1C080 [details] [associations]
symbol:RAB8B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0045046 "protein import into peroxisome membrane" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0005778
GO:GO:0045046 GeneTree:ENSGT00700000104031 OMA:TSFFRCL
EMBL:AADN02040439 EMBL:AADN02040440 EMBL:AADN02040441
IPI:IPI00585001 Ensembl:ENSGALT00000005515 Uniprot:E1C080
Length = 178
Score = 358 (131.1 bits), Expect = 5.5e-32, P = 5.5e-32
Identities = 67/156 (42%), Positives = 108/156 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ ++ +E
Sbjct: 125 MNEKRQVSKEKGEKLAIDYGIKFLETSAKSSINVEE 160
Score = 117 (46.2 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 185 YLASLEGH-SNNIHCMAR-NKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
++ ++E H S+++ M NK D E R++ E GE A + + +LETSAK+S NVE+
Sbjct: 102 WIRNIEEHASSDVERMILGNKCDMNEKRQVSKEKGEKLAIDYGIKFLETSAKSSINVEEA 161
Query: 242 FMQIAAELMEKLAEKL 257
F +A ++M KL K+
Sbjct: 162 FFTLARDIMTKLNRKM 177
>FB|FBgn0016700 [details] [associations]
symbol:Rab1 "Rab1" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=TAS] [GO:0008360
"regulation of cell shape" evidence=IMP] [GO:0007015 "actin
filament organization" evidence=IMP] [GO:0007155 "cell adhesion"
evidence=IMP] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0050774 "negative
regulation of dendrite morphogenesis" evidence=IMP] [GO:0031982
"vesicle" evidence=ISS] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:AE014297 GO:GO:0050774
GO:GO:0007264 GO:GO:0007015 GO:GO:0008360 GO:GO:0005811
GO:GO:0003924 GO:GO:0007155 GO:GO:0009306 GO:GO:0030334
eggNOG:COG1100 HOGENOM:HOG000208217 HSSP:P07560
GeneTree:ENSGT00700000104049 KO:K07874 OMA:NRVGPPS CTD:19324
EMBL:BT046126 EMBL:D84312 RefSeq:NP_732610.1 UniGene:Dm.2386
SMR:O18332 IntAct:O18332 MINT:MINT-990386 STRING:O18332
EnsemblMetazoa:FBtr0084104 GeneID:42524 KEGG:dme:Dmel_CG3320
UCSC:CG3320-RA FlyBase:FBgn0016700 InParanoid:O18332
OrthoDB:EOG44QRH0 GenomeRNAi:42524 NextBio:829257 Uniprot:O18332
Length = 205
Score = 358 (131.1 bits), Expect = 5.5e-32, P = 5.5e-32
Identities = 73/158 (46%), Positives = 106/158 (67%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD + Q +F+ + WL EIE YA V ++LVG S
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKS 126
Query: 123 GL---KIVNEMASAAGLLCTVDPALATALASDKTDLDE 157
L K+V+ +A P L T+ A T++++
Sbjct: 127 DLTTKKVVDHTTAAEYAAQLGIPFLETS-AKSATNVEQ 163
>POMBASE|SPBC1703.10 [details] [associations]
symbol:ypt1 "GTPase Ypt1" species:4896
"Schizosaccharomyces pombe" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=IGI]
[GO:0005525 "GTP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IC] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISO] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IMP] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IC] [GO:0070317 "negative regulation of G0
to G1 transition" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 PomBase:SPBC1703.10 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005829 GO:GO:0005886 GO:GO:0005634 GO:GO:0006886
GO:GO:0007264 GO:GO:0000139 GO:GO:0070317 GO:GO:0005789
EMBL:CU329671 GO:GO:0003924 GenomeReviews:CU329671_GR
PROSITE:PS51419 GO:GO:0006888 GO:GO:0006995 eggNOG:COG1100
HOGENOM:HOG000233968 KO:K07874 OMA:IDSTPVR EMBL:X52099 EMBL:X15082
PIR:S04590 PIR:T50323 RefSeq:NP_596205.1 ProteinModelPortal:P11620
SMR:P11620 STRING:P11620 PRIDE:P11620 EnsemblFungi:SPBC1703.10.1
GeneID:2539784 KEGG:spo:SPBC1703.10 OrthoDB:EOG49W5QK
NextBio:20800933 Uniprot:P11620
Length = 203
Score = 358 (131.1 bits), Expect = 5.5e-32, P = 5.5e-32
Identities = 73/158 (46%), Positives = 109/158 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T E+ + +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YA V R+LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKS 123
Query: 123 GL--KIVNEMASAAGLLCTVD-PALATALASDKTDLDE 157
+ K V E + A +++ P L T+ A D T++++
Sbjct: 124 DMVDKKVVEYSVAKEFADSLNIPFLETS-AKDSTNVEQ 160
>ZFIN|ZDB-GENE-090312-110 [details] [associations]
symbol:si:ch73-131e21.5 "si:ch73-131e21.5"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-090312-110
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 OrthoDB:EOG48D0WM OMA:VESYIST
EMBL:CU467849 IPI:IPI00496910 UniGene:Dr.52596
Ensembl:ENSDART00000074083 Uniprot:B8JLC8
Length = 201
Score = 358 (131.1 bits), Expect = 5.5e-32, P = 5.5e-32
Identities = 72/158 (45%), Positives = 108/158 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 123
Query: 123 GL---KIVNEMASAAGLLCTVDPALATALASDKTDLDE 157
L K+V+ A+ P L T+ A T++++
Sbjct: 124 DLTTKKVVDYTAAKEFADSLSIPFLETS-AKSSTNVEQ 160
>UNIPROTKB|E2RFR4 [details] [associations]
symbol:RAB3D "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101942 EMBL:AAEX03012413
Ensembl:ENSCAFT00000027638 NextBio:20852320 Uniprot:E2RFR4
Length = 221
Score = 295 (108.9 bits), Expect = 7.0e-32, Sum P(2) = 7.0e-32
Identities = 53/124 (42%), Positives = 85/124 (68%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++L+GN+ VGKT + R+ F P +T+G+DF +KTV +++RIKLQIW
Sbjct: 19 QNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIW 78
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQER+R+IT +YYR A +L+YD++ Q +F + DW +I+ Y+ +LVG
Sbjct: 79 DTAGQERYRTITTAYYRGAMGFLLMYDVANQESFAAVQDWATQIKTYSWDNAQVILVGNK 138
Query: 122 SGLK 125
L+
Sbjct: 139 CDLE 142
Score = 88 (36.0 bits), Expect = 7.0e-32, Sum P(2) = 7.0e-32
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D ED R +PTE G A + E SAK + NV+++F ++ + EK+ E L
Sbjct: 137 NKCDLEDERVVPTEDGRRLADDLGFEFFEASAKENINVKQVFERLVDIICEKMNESL 193
>UNIPROTKB|F1NNL7 [details] [associations]
symbol:RAB1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104049 CTD:5861 KO:K07874
OMA:NRVGPPS EMBL:AADN02036218 EMBL:AADN02036219 IPI:IPI00684373
RefSeq:NP_001257591.1 UniGene:Gga.34237 UniGene:Gga.37826
Ensembl:ENSGALT00000031973 GeneID:421273 KEGG:gga:421273
NextBio:20824063 ArrayExpress:F1NNL7 Uniprot:F1NNL7
Length = 205
Score = 357 (130.7 bits), Expect = 7.1e-32, P = 7.1e-32
Identities = 73/164 (44%), Positives = 112/164 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 123 GL--KIVNEMASAAGLLCTVD-PALATALASDKTDLDEDEHVLA 163
L K V + +A ++ P L T+ A + T++++ +A
Sbjct: 127 DLTTKKVVDYTTAKEFADSLGIPFLETS-AKNATNVEQSFMTMA 169
>UNIPROTKB|A1L528 [details] [associations]
symbol:RAB1A "RAB1A, member RAS oncogene family"
species:9913 "Bos taurus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 OMA:NRVGPPS EMBL:DAAA02031452
EMBL:BT029815 IPI:IPI00829520 UniGene:Bt.49381 SMR:A1L528
Ensembl:ENSBTAT00000022227 InParanoid:A1L528 Uniprot:A1L528
Length = 205
Score = 357 (130.7 bits), Expect = 7.1e-32, P = 7.1e-32
Identities = 73/164 (44%), Positives = 112/164 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 123 GL--KIVNEMASAAGLLCTVD-PALATALASDKTDLDEDEHVLA 163
L K V + +A ++ P L T+ A + T++++ +A
Sbjct: 127 DLTTKKVVDYTTAKEFADSLGIPFLETS-AKNATNVEQSFMTMA 169
>UNIPROTKB|F1Q0H3 [details] [associations]
symbol:RAB1A "Ras-related protein Rab-1A" species:9615
"Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104049 OMA:NRVGPPS EMBL:AAEX03007591
Ensembl:ENSCAFT00000005128 Uniprot:F1Q0H3
Length = 250
Score = 357 (130.7 bits), Expect = 7.1e-32, P = 7.1e-32
Identities = 73/164 (44%), Positives = 112/164 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 52 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 111
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 112 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 171
Query: 123 GL--KIVNEMASAAGLLCTVD-PALATALASDKTDLDEDEHVLA 163
L K V + +A ++ P L T+ A + T++++ +A
Sbjct: 172 DLTTKKVVDYTTAKEFADSLGIPFLETS-AKNATNVEQSFMTMA 214
>UNIPROTKB|P62822 [details] [associations]
symbol:RAB1A "Ras-related protein Rab-1A" species:9615
"Canis lupus familiaris" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005783 GO:GO:0005794
GO:GO:0007264 GO:GO:0016192 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 EMBL:X56384 RefSeq:NP_001003153.1
UniGene:Cfa.26557 ProteinModelPortal:P62822 SMR:P62822
IntAct:P62822 PRIDE:P62822 Ensembl:ENSCAFT00000049414 GeneID:403774
KEGG:cfa:403774 CTD:5861 InParanoid:P62822 KO:K07874
OrthoDB:EOG48D0WM NextBio:20817273 Uniprot:P62822
Length = 205
Score = 357 (130.7 bits), Expect = 7.1e-32, P = 7.1e-32
Identities = 73/164 (44%), Positives = 112/164 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 123 GL--KIVNEMASAAGLLCTVD-PALATALASDKTDLDEDEHVLA 163
L K V + +A ++ P L T+ A + T++++ +A
Sbjct: 127 DLTTKKVVDYTTAKEFADSLGIPFLETS-AKNATNVEQSFMTMA 169
>UNIPROTKB|P62820 [details] [associations]
symbol:RAB1A "Ras-related protein Rab-1A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005783 GO:GO:0005794
Reactome:REACT_115566 GO:GO:0007264 EMBL:CH471053
Reactome:REACT_21300 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
PROSITE:PS51419 eggNOG:COG1100 PDB:4FME PDBsum:4FME
HOVERGEN:HBG009351 PDB:2WWX PDB:3L0I PDBsum:2WWX PDBsum:3L0I
HOGENOM:HOG000233968 CTD:5861 KO:K07874 OrthoDB:EOG48D0WM
OMA:NRVGPPS EMBL:M28209 EMBL:AL050268 EMBL:BX571747 EMBL:AK055927
EMBL:AF498929 EMBL:CR533479 EMBL:BC000905 IPI:IPI00005719
IPI:IPI00185217 IPI:IPI00334174 PIR:A34323 RefSeq:NP_004152.1
RefSeq:NP_056358.1 UniGene:Hs.310645 PDB:2FOL PDB:3SFV PDB:3TKL
PDB:4FMB PDB:4FMC PDB:4FMD PDBsum:2FOL PDBsum:3SFV PDBsum:3TKL
PDBsum:4FMB PDBsum:4FMC PDBsum:4FMD ProteinModelPortal:P62820
SMR:P62820 DIP:DIP-1063N IntAct:P62820 MINT:MINT-1343792
STRING:P62820 PhosphoSite:P62820 DMDM:51338603 PaxDb:P62820
PRIDE:P62820 DNASU:5861 Ensembl:ENST00000398529
Ensembl:ENST00000409784 Ensembl:ENST00000409892 GeneID:5861
KEGG:hsa:5861 UCSC:uc002sdm.3 UCSC:uc002sdn.3 UCSC:uc002sdo.3
GeneCards:GC02M065297 HGNC:HGNC:9758 HPA:CAB005331 MIM:179508
neXtProt:NX_P62820 PharmGKB:PA34107 ChiTaRS:RAB1A
EvolutionaryTrace:P62820 GenomeRNAi:5861 NextBio:22762
ArrayExpress:P62820 Bgee:P62820 CleanEx:HS_RAB1A
Genevestigator:P62820 GermOnline:ENSG00000138069 Uniprot:P62820
Length = 205
Score = 357 (130.7 bits), Expect = 7.1e-32, P = 7.1e-32
Identities = 73/164 (44%), Positives = 112/164 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 123 GL--KIVNEMASAAGLLCTVD-PALATALASDKTDLDEDEHVLA 163
L K V + +A ++ P L T+ A + T++++ +A
Sbjct: 127 DLTTKKVVDYTTAKEFADSLGIPFLETS-AKNATNVEQSFMTMA 169
>UNIPROTKB|F2Z5U4 [details] [associations]
symbol:RAB1A "Ras-related protein Rab-1A" species:9823 "Sus
scrofa" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104049 OMA:NRVGPPS
EMBL:CU928819 ProteinModelPortal:F2Z5U4 SMR:F2Z5U4
Ensembl:ENSSSCT00000009153 Uniprot:F2Z5U4
Length = 202
Score = 357 (130.7 bits), Expect = 7.1e-32, P = 7.1e-32
Identities = 73/164 (44%), Positives = 112/164 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 123
Query: 123 GL--KIVNEMASAAGLLCTVD-PALATALASDKTDLDEDEHVLA 163
L K V + +A ++ P L T+ A + T++++ +A
Sbjct: 124 DLTTKKVVDYTTAKEFADSLGIPFLETS-AKNATNVEQSFMTMA 166
>MGI|MGI:97842 [details] [associations]
symbol:Rab1 "RAB1, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000139 "Golgi membrane" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=TAS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:97842
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005783 GO:GO:0005794
GO:GO:0006886 GO:GO:0007264 PROSITE:PS51419 GO:GO:0006888
eggNOG:COG1100 HOVERGEN:HBG009351 KO:K07874 OMA:NRVGPPS EMBL:Y00094
EMBL:X15744 EMBL:X15745 EMBL:X15746 EMBL:X15747 EMBL:AF226873
EMBL:AK034408 EMBL:AK159425 EMBL:AK166249 EMBL:AK167150
EMBL:BC002077 IPI:IPI00114560 PIR:S05551 RefSeq:NP_033022.1
UniGene:Mm.271944 ProteinModelPortal:P62821 SMR:P62821
IntAct:P62821 STRING:P62821 PhosphoSite:P62821 PaxDb:P62821
PRIDE:P62821 Ensembl:ENSMUST00000163483 GeneID:19324 KEGG:mmu:19324
CTD:19324 InParanoid:P62821 NextBio:296283 Bgee:P62821
CleanEx:MM_RAB1 Genevestigator:P62821 GermOnline:ENSMUSG00000020149
Uniprot:P62821
Length = 205
Score = 357 (130.7 bits), Expect = 7.1e-32, P = 7.1e-32
Identities = 73/164 (44%), Positives = 112/164 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 123 GL--KIVNEMASAAGLLCTVD-PALATALASDKTDLDEDEHVLA 163
L K V + +A ++ P L T+ A + T++++ +A
Sbjct: 127 DLTTKKVVDYTTAKEFADSLGIPFLETS-AKNATNVEQSFMTMA 169
>RGD|619736 [details] [associations]
symbol:Rab1a "RAB1A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005525 "GTP binding" evidence=IDA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IDA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0032482 "Rab protein signal transduction" evidence=IC]
[GO:0043025 "neuronal cell body" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:619736 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0000139 GO:GO:0005789 GO:GO:0015031 GO:GO:0043025
PROSITE:PS51419 GO:GO:0006888 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 KO:K07874 CTD:19324 EMBL:J02998 EMBL:BC066662
IPI:IPI00421897 PIR:A39963 RefSeq:NP_112352.2 UniGene:Rn.106743
ProteinModelPortal:Q6NYB7 SMR:Q6NYB7 IntAct:Q6NYB7 STRING:Q6NYB7
PhosphoSite:Q6NYB7 PRIDE:Q6NYB7 Ensembl:ENSRNOT00000006950
GeneID:81754 KEGG:rno:81754 UCSC:RGD:619736 NextBio:615518
ArrayExpress:Q6NYB7 Genevestigator:Q6NYB7
GermOnline:ENSRNOG00000004992 GO:GO:0032482 Uniprot:Q6NYB7
Length = 205
Score = 357 (130.7 bits), Expect = 7.1e-32, P = 7.1e-32
Identities = 73/164 (44%), Positives = 112/164 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 123 GL--KIVNEMASAAGLLCTVD-PALATALASDKTDLDEDEHVLA 163
L K V + +A ++ P L T+ A + T++++ +A
Sbjct: 127 DLTTKKVVDYTTAKEFADSLGIPFLETS-AKNATNVEQSFMTMA 169
>UNIPROTKB|P11023 [details] [associations]
symbol:RAB3A "Ras-related protein Rab-3A" species:9913 "Bos
taurus" [GO:0050975 "sensory perception of touch" evidence=ISS]
[GO:0016188 "synaptic vesicle maturation" evidence=ISS] [GO:0007274
"neuromuscular synaptic transmission" evidence=ISS] [GO:0003924
"GTPase activity" evidence=ISS] [GO:0051602 "response to electrical
stimulus" evidence=ISS] [GO:0048790 "maintenance of presynaptic
active zone structure" evidence=ISS] [GO:0031630 "regulation of
synaptic vesicle fusion to presynaptic membrane" evidence=ISS]
[GO:0030324 "lung development" evidence=ISS] [GO:0017157
"regulation of exocytosis" evidence=ISS] [GO:0016079 "synaptic
vesicle exocytosis" evidence=ISS] [GO:0009791 "post-embryonic
development" evidence=ISS] [GO:0008021 "synaptic vesicle"
evidence=ISS] [GO:0007409 "axonogenesis" evidence=ISS] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0003016 "respiratory
system process" evidence=ISS] [GO:0016020 "membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0001669 "acrosomal
vesicle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0016020
GO:GO:0030324 GO:GO:0015031 GO:GO:0008021 GO:GO:0051602
GO:GO:0007274 GO:GO:0003924 GO:GO:0009791 GO:GO:0007409
GO:GO:0003016 PROSITE:PS51419 GO:GO:0007005 GO:GO:0016079
eggNOG:COG1100 GO:GO:0050975 HOVERGEN:HBG009351 GO:GO:0016188
GO:GO:0031630 HOGENOM:HOG000233968 EMBL:M19885 EMBL:BC118278
IPI:IPI00703436 PIR:A29224 RefSeq:NP_776871.2 UniGene:Bt.2362
ProteinModelPortal:P11023 SMR:P11023 STRING:P11023 PRIDE:P11023
Ensembl:ENSBTAT00000014062 GeneID:282029 KEGG:bta:282029 CTD:5864
GeneTree:ENSGT00690000101942 InParanoid:P11023 KO:K07882
OMA:QLTEQPA OrthoDB:EOG4TB4C6 NextBio:20805892 GO:GO:0048790
Uniprot:P11023
Length = 220
Score = 300 (110.7 bits), Expect = 8.5e-32, Sum P(2) = 8.5e-32
Identities = 54/134 (40%), Positives = 90/134 (67%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F P +T+G+DF +KT+ N++RIKLQIW
Sbjct: 17 QNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIW 76
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW +I+ Y+ +LVG
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNK 136
Query: 122 SGLKIVNEMASAAG 135
++ ++S G
Sbjct: 137 CDMEDERVVSSERG 150
Score = 82 (33.9 bits), Expect = 8.5e-32, Sum P(2) = 8.5e-32
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D ED R + +E G A + E SAK + NV++ F ++ + EK++E L
Sbjct: 135 NKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191
>UNIPROTKB|E2RIA5 [details] [associations]
symbol:RAB3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051602 "response to electrical stimulus"
evidence=IEA] [GO:0050975 "sensory perception of touch"
evidence=IEA] [GO:0048790 "maintenance of presynaptic active zone
structure" evidence=IEA] [GO:0031630 "regulation of synaptic
vesicle fusion to presynaptic membrane" evidence=IEA] [GO:0030324
"lung development" evidence=IEA] [GO:0016188 "synaptic vesicle
maturation" evidence=IEA] [GO:0016079 "synaptic vesicle exocytosis"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] [GO:0007274 "neuromuscular
synaptic transmission" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0003016 "respiratory system process"
evidence=IEA] [GO:0001669 "acrosomal vesicle" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0030324
GO:GO:0015031 GO:GO:0008021 GO:GO:0051602 GO:GO:0007274
GO:GO:0003924 GO:GO:0009791 GO:GO:0007409 GO:GO:0003016
GO:GO:0007005 GO:GO:0016079 GO:GO:0050975 GO:GO:0016188
GO:GO:0031630 GeneTree:ENSGT00690000101942 OMA:QLTEQPA
GO:GO:0048790 EMBL:AAEX03012283 ProteinModelPortal:E2RIA5
PRIDE:E2RIA5 Ensembl:ENSCAFT00000023719 NextBio:20858896
Uniprot:E2RIA5
Length = 226
Score = 300 (110.7 bits), Expect = 8.5e-32, Sum P(2) = 8.5e-32
Identities = 54/134 (40%), Positives = 90/134 (67%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F P +T+G+DF +KT+ N++RIKLQIW
Sbjct: 23 QNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIW 82
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW +I+ Y+ +LVG
Sbjct: 83 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNK 142
Query: 122 SGLKIVNEMASAAG 135
++ ++S G
Sbjct: 143 CDMEDERVVSSERG 156
Score = 82 (33.9 bits), Expect = 8.5e-32, Sum P(2) = 8.5e-32
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D ED R + +E G A + E SAK + NV++ F ++ + EK++E L
Sbjct: 141 NKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 197
>UNIPROTKB|P20336 [details] [associations]
symbol:RAB3A "Ras-related protein Rab-3A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0001669 "acrosomal vesicle" evidence=IEA]
[GO:0001671 "ATPase activator activity" evidence=IEA] [GO:0003016
"respiratory system process" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IEA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0008021 "synaptic vesicle"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0016079 "synaptic vesicle exocytosis"
evidence=IEA] [GO:0016188 "synaptic vesicle maturation"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0031630 "regulation of synaptic vesicle fusion to presynaptic
membrane" evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0048790 "maintenance of presynaptic active zone structure"
evidence=IEA] [GO:0050975 "sensory perception of touch"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0051117 "ATPase binding" evidence=IEA] [GO:0051602 "response to
electrical stimulus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003924 "GTPase activity" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007269 "neurotransmitter
secretion" evidence=TAS] [GO:0014047 "glutamate secretion"
evidence=TAS] [GO:0060201 "clathrin-sculpted acetylcholine
transport vesicle membrane" evidence=TAS] [GO:0060203
"clathrin-sculpted glutamate transport vesicle membrane"
evidence=TAS] [GO:0061202 "clathrin-sculpted gamma-aminobutyric
acid transport vesicle membrane" evidence=TAS] [GO:0070083
"clathrin-sculpted monoamine transport vesicle membrane"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=IMP;TAS]
Reactome:REACT_13685 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0030324 GO:GO:0015031 GO:GO:0008021
GO:GO:0051602 GO:GO:0007274 GO:GO:0003924 GO:GO:0009791
GO:GO:0007409 GO:GO:0003016 PROSITE:PS51419 GO:GO:0001671
GO:GO:0007005 EMBL:CH471106 GO:GO:0007269 GO:GO:0014047
GO:GO:0016079 eggNOG:COG1100 GO:GO:0050975 HOVERGEN:HBG009351
GO:GO:0061202 GO:GO:0016188 EMBL:AC068499 GO:GO:0031630
HOGENOM:HOG000233968 CTD:5864 KO:K07882 OMA:QLTEQPA
OrthoDB:EOG4TB4C6 GO:GO:0048790 EMBL:M28210 EMBL:AF157809
EMBL:AF157806 EMBL:AF157807 EMBL:AF157808 EMBL:AF254795
EMBL:AF498931 EMBL:AK289559 EMBL:BC011782 IPI:IPI00023504
PIR:C34323 RefSeq:NP_002857.1 UniGene:Hs.27744
ProteinModelPortal:P20336 SMR:P20336 IntAct:P20336 STRING:P20336
PhosphoSite:P20336 DMDM:131801 PaxDb:P20336 PRIDE:P20336 DNASU:5864
Ensembl:ENST00000222256 GeneID:5864 KEGG:hsa:5864 UCSC:uc002nie.2
GeneCards:GC19M018307 HGNC:HGNC:9777 HPA:CAB009949 HPA:HPA003160
MIM:179490 neXtProt:NX_P20336 PharmGKB:PA34132 InParanoid:P20336
PhylomeDB:P20336 GenomeRNAi:5864 NextBio:22774 Bgee:P20336
CleanEx:HS_RAB3A Genevestigator:P20336 GermOnline:ENSG00000105649
GO:GO:0060201 GO:GO:0060203 GO:GO:0070083 Uniprot:P20336
Length = 220
Score = 300 (110.7 bits), Expect = 8.5e-32, Sum P(2) = 8.5e-32
Identities = 54/134 (40%), Positives = 90/134 (67%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F P +T+G+DF +KT+ N++RIKLQIW
Sbjct: 17 QNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIW 76
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW +I+ Y+ +LVG
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNK 136
Query: 122 SGLKIVNEMASAAG 135
++ ++S G
Sbjct: 137 CDMEDERVVSSERG 150
Score = 82 (33.9 bits), Expect = 8.5e-32, Sum P(2) = 8.5e-32
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D ED R + +E G A + E SAK + NV++ F ++ + EK++E L
Sbjct: 135 NKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191
>UNIPROTKB|Q06AU3 [details] [associations]
symbol:RAB3A "Ras-related protein Rab-3A" species:9823 "Sus
scrofa" [GO:0030324 "lung development" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0016079 "synaptic vesicle exocytosis"
evidence=ISS] [GO:0051602 "response to electrical stimulus"
evidence=ISS] [GO:0050975 "sensory perception of touch"
evidence=ISS] [GO:0048790 "maintenance of presynaptic active zone
structure" evidence=ISS] [GO:0031630 "regulation of synaptic
vesicle fusion to presynaptic membrane" evidence=ISS] [GO:0017157
"regulation of exocytosis" evidence=ISS] [GO:0016188 "synaptic
vesicle maturation" evidence=ISS] [GO:0009791 "post-embryonic
development" evidence=ISS] [GO:0008021 "synaptic vesicle"
evidence=ISS] [GO:0007274 "neuromuscular synaptic transmission"
evidence=ISS] [GO:0007005 "mitochondrion organization"
evidence=ISS] [GO:0003016 "respiratory system process"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0001669 "acrosomal vesicle" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0030324 GO:GO:0015031 GO:GO:0008021 GO:GO:0051602
GO:GO:0007274 GO:GO:0003924 GO:GO:0009791 GO:GO:0007409
GO:GO:0003016 PROSITE:PS51419 GO:GO:0007005 GO:GO:0016079
eggNOG:COG1100 GO:GO:0050975 HOVERGEN:HBG009351 GO:GO:0016188
GO:GO:0031630 HOGENOM:HOG000233968 CTD:5864
GeneTree:ENSGT00690000101942 KO:K07882 OMA:QLTEQPA
OrthoDB:EOG4TB4C6 GO:GO:0048790 EMBL:DQ917632 RefSeq:NP_001116651.1
UniGene:Ssc.5969 ProteinModelPortal:Q06AU3 SMR:Q06AU3 PRIDE:Q06AU3
Ensembl:ENSSSCT00000015183 GeneID:100144498 KEGG:ssc:100144498
Uniprot:Q06AU3
Length = 220
Score = 300 (110.7 bits), Expect = 8.5e-32, Sum P(2) = 8.5e-32
Identities = 54/134 (40%), Positives = 90/134 (67%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F P +T+G+DF +KT+ N++RIKLQIW
Sbjct: 17 QNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIW 76
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW +I+ Y+ +LVG
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNK 136
Query: 122 SGLKIVNEMASAAG 135
++ ++S G
Sbjct: 137 CDMEDERVVSSERG 150
Score = 82 (33.9 bits), Expect = 8.5e-32, Sum P(2) = 8.5e-32
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D ED R + +E G A + E SAK + NV++ F ++ + EK++E L
Sbjct: 135 NKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191
>MGI|MGI:97843 [details] [associations]
symbol:Rab3a "RAB3A, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0001669 "acrosomal vesicle" evidence=IDA] [GO:0001671 "ATPase
activator activity" evidence=ISO] [GO:0003016 "respiratory system
process" evidence=IMP] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006184 "GTP
catabolic process" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006887 "exocytosis" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IMP] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0008021 "synaptic vesicle"
evidence=ISO;IDA] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0009791 "post-embryonic development"
evidence=IMP] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=ISO] [GO:0016079 "synaptic vesicle
exocytosis" evidence=IMP] [GO:0016188 "synaptic vesicle maturation"
evidence=IMP] [GO:0017157 "regulation of exocytosis" evidence=IDA]
[GO:0030324 "lung development" evidence=IMP] [GO:0031630
"regulation of synaptic vesicle fusion to presynaptic membrane"
evidence=IMP] [GO:0032781 "positive regulation of ATPase activity"
evidence=ISO] [GO:0043229 "intracellular organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0048790
"maintenance of presynaptic active zone structure" evidence=IMP]
[GO:0050975 "sensory perception of touch" evidence=IMP] [GO:0051020
"GTPase binding" evidence=ISO] [GO:0051117 "ATPase binding"
evidence=ISO] [GO:0051602 "response to electrical stimulus"
evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:97843 EMBL:X72966 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0043234 GO:GO:0030324
GO:GO:0015031 GO:GO:0008021 GO:GO:0051602 GO:GO:0007274
GO:GO:0003924 GO:GO:0001669 GO:GO:0009791 GO:GO:0007409
GO:GO:0003016 PROSITE:PS51419 GO:GO:0001671 GO:GO:0007005
GO:GO:0016079 eggNOG:COG1100 GO:GO:0050975 HOVERGEN:HBG009351
GO:GO:0016188 GO:GO:0031630 HOGENOM:HOG000233968 CTD:5864 KO:K07882
OMA:QLTEQPA OrthoDB:EOG4TB4C6 GO:GO:0048790 EMBL:AK005362
EMBL:AK158727 EMBL:AK161975 EMBL:BC053519 IPI:IPI00122965
PIR:S34070 RefSeq:NP_001159871.1 RefSeq:NP_033027.1 UniGene:Mm.5083
ProteinModelPortal:P63011 SMR:P63011 DIP:DIP-31051N IntAct:P63011
MINT:MINT-85820 STRING:P63011 PhosphoSite:P63011 PaxDb:P63011
PRIDE:P63011 Ensembl:ENSMUST00000034301 Ensembl:ENSMUST00000110090
Ensembl:ENSMUST00000110092 Ensembl:ENSMUST00000110093 GeneID:19339
KEGG:mmu:19339 InParanoid:P63011 ChiTaRS:RAB3A NextBio:296339
Bgee:P63011 CleanEx:MM_RAB3A Genevestigator:P63011
GermOnline:ENSMUSG00000031840 Uniprot:P63011
Length = 220
Score = 300 (110.7 bits), Expect = 8.5e-32, Sum P(2) = 8.5e-32
Identities = 54/134 (40%), Positives = 90/134 (67%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F P +T+G+DF +KT+ N++RIKLQIW
Sbjct: 17 QNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIW 76
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW +I+ Y+ +LVG
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNK 136
Query: 122 SGLKIVNEMASAAG 135
++ ++S G
Sbjct: 137 CDMEDERVVSSERG 150
Score = 82 (33.9 bits), Expect = 8.5e-32, Sum P(2) = 8.5e-32
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D ED R + +E G A + E SAK + NV++ F ++ + EK++E L
Sbjct: 135 NKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191
>RGD|3528 [details] [associations]
symbol:Rab3a "RAB3A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0001669 "acrosomal vesicle" evidence=IEA;ISO]
[GO:0001671 "ATPase activator activity" evidence=IDA] [GO:0003016
"respiratory system process" evidence=IEA;ISO] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005525 "GTP binding" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=IEA;ISO] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IEA;ISO] [GO:0007409
"axonogenesis" evidence=IEA;ISO] [GO:0008021 "synaptic vesicle"
evidence=ISO;IDA] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0009791 "post-embryonic development"
evidence=IEA;ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IDA] [GO:0016079 "synaptic vesicle
exocytosis" evidence=IEA;ISO] [GO:0016188 "synaptic vesicle
maturation" evidence=IEA;ISO] [GO:0017157 "regulation of exocytosis"
evidence=ISO] [GO:0030324 "lung development" evidence=IEA;ISO]
[GO:0031630 "regulation of synaptic vesicle fusion to presynaptic
membrane" evidence=IEA;ISO] [GO:0032482 "Rab protein signal
transduction" evidence=IC] [GO:0032781 "positive regulation of ATPase
activity" evidence=IDA] [GO:0043229 "intracellular organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA] [GO:0048790
"maintenance of presynaptic active zone structure" evidence=IEA;ISO]
[GO:0050975 "sensory perception of touch" evidence=IEA;ISO]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0051117 "ATPase
binding" evidence=IDA] [GO:0051602 "response to electrical stimulus"
evidence=IEA;ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:3528
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0043234 GO:GO:0016020 GO:GO:0030324 GO:GO:0015031 GO:GO:0008021
GO:GO:0051602 GO:GO:0007274 GO:GO:0003924 GO:GO:0009791 GO:GO:0007409
GO:GO:0003016 PROSITE:PS51419 GO:GO:0001671 GO:GO:0007005
GO:GO:0051117 GO:GO:0016079 eggNOG:COG1100 GO:GO:0050975
HOVERGEN:HBG009351 GO:GO:0016188 GO:GO:0031630 HOGENOM:HOG000233968
GO:GO:0032482 CTD:5864 GeneTree:ENSGT00690000101942 KO:K07882
OMA:QLTEQPA OrthoDB:EOG4TB4C6 GO:GO:0048790 EMBL:X06889 EMBL:BC087580
IPI:IPI00325762 PIR:S01765 RefSeq:NP_037150.2 UniGene:Rn.44409
PDB:1ZBD PDB:3RAB PDBsum:1ZBD PDBsum:3RAB ProteinModelPortal:P63012
SMR:P63012 IntAct:P63012 MINT:MINT-1506235 STRING:P63012
PhosphoSite:P63012 PRIDE:P63012 Ensembl:ENSRNOT00000026391
GeneID:25531 KEGG:rno:25531 UCSC:RGD:3528 InParanoid:P63012
EvolutionaryTrace:P63012 NextBio:607029 ArrayExpress:P63012
Genevestigator:P63012 GermOnline:ENSRNOG00000019433 Uniprot:P63012
Length = 220
Score = 300 (110.7 bits), Expect = 8.5e-32, Sum P(2) = 8.5e-32
Identities = 54/134 (40%), Positives = 90/134 (67%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F P +T+G+DF +KT+ N++RIKLQIW
Sbjct: 17 QNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIW 76
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW +I+ Y+ +LVG
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNK 136
Query: 122 SGLKIVNEMASAAG 135
++ ++S G
Sbjct: 137 CDMEDERVVSSERG 150
Score = 82 (33.9 bits), Expect = 8.5e-32, Sum P(2) = 8.5e-32
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D ED R + +E G A + E SAK + NV++ F ++ + EK++E L
Sbjct: 135 NKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191
>UNIPROTKB|F5GY21 [details] [associations]
symbol:RAB8B "Ras-related protein Rab-8B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AC016207
HGNC:HGNC:30273 ChiTaRS:RAB8B IPI:IPI01013645
ProteinModelPortal:F5GY21 SMR:F5GY21 Ensembl:ENST00000448330
UCSC:uc010uih.2 ArrayExpress:F5GY21 Bgee:F5GY21 Uniprot:F5GY21
Length = 190
Score = 356 (130.4 bits), Expect = 9.1e-32, P = 9.1e-32
Identities = 67/157 (42%), Positives = 108/157 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEH 160
+ +++ G +D + S K+ + +E+
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEN 161
>UNIPROTKB|Q52NJ2 [details] [associations]
symbol:RAB1A "Ras-related protein Rab-1A" species:9823 "Sus
scrofa" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005783 GO:GO:0005794 GO:GO:0007264
GO:GO:0016192 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:5861 KO:K07874
OrthoDB:EOG48D0WM EMBL:AY996813 RefSeq:NP_001026957.1
UniGene:Ssc.11024 ProteinModelPortal:Q52NJ2 SMR:Q52NJ2
GeneID:595116 KEGG:ssc:595116 Uniprot:Q52NJ2
Length = 205
Score = 356 (130.4 bits), Expect = 9.1e-32, P = 9.1e-32
Identities = 73/164 (44%), Positives = 112/164 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 123 GL--KIVNEMASAAGLLCTVD-PALATALASDKTDLDEDEHVLA 163
L K V + +A ++ P L T+ A + T++++ +A
Sbjct: 127 DLTTKKVVDYTTAKEFADSLGIPFLETS-AKNATNVEQSFMTMA 169
>ZFIN|ZDB-GENE-030616-564 [details] [associations]
symbol:rab1a "RAB1A, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-030616-564 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
HOGENOM:HOG000233968 HSSP:P07560 GeneTree:ENSGT00700000104049
CTD:5861 KO:K07874 OrthoDB:EOG48D0WM OMA:NRVGPPS EMBL:AL772154
EMBL:BC050239 EMBL:BC062857 IPI:IPI00492639 RefSeq:NP_001007162.1
UniGene:Dr.77140 SMR:Q7ZSZ0 STRING:Q7ZSZ0
Ensembl:ENSDART00000043002 GeneID:368883 KEGG:dre:368883
InParanoid:Q7ZSZ0 NextBio:20813242 Uniprot:Q7ZSZ0
Length = 201
Score = 356 (130.4 bits), Expect = 9.1e-32, P = 9.1e-32
Identities = 72/158 (45%), Positives = 110/158 (69%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 123
Query: 123 GL--KIVNEMASAAGLLCTVD-PALATALASDKTDLDE 157
L K V + +A ++ P L T+ A + T++++
Sbjct: 124 DLTTKKVVDYTTAKEFADSLGIPFLETS-AKNATNVEQ 160
>UNIPROTKB|J9P6H6 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
EMBL:AAEX03014730 EMBL:AAEX03014731 EMBL:AAEX03014732
RefSeq:XP_854240.3 Ensembl:ENSCAFT00000049240 GeneID:611477
KEGG:cfa:611477 Uniprot:J9P6H6
Length = 201
Score = 311 (114.5 bits), Expect = 9.7e-32, Sum P(2) = 9.7e-32
Identities = 60/117 (51%), Positives = 81/117 (69%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY LFK++++G++GV K+ L+ RF F TIGVDF I+TVEIN E++KLQIWD
Sbjct: 4 DYDHLFKLLIIGDSGVVKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR H +I+VYD++ +F + WL EI + V R+LVG
Sbjct: 64 TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVG 119
Score = 70 (29.7 bits), Expect = 9.7e-32, Sum P(2) = 9.7e-32
Identities = 25/81 (30%), Positives = 38/81 (46%)
Query: 202 NKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK D +R++ TE FA + + ETSAK + NVE++F I ++ + L
Sbjct: 120 NKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179
Query: 261 HDR---GVGMLTRIYNIKKAC 278
+ V LT+ KK C
Sbjct: 180 QQQQQNDVVKLTKNSKRKKRC 200
>UNIPROTKB|Q5REC9 [details] [associations]
symbol:RAB8B "Ras-related protein Rab-8B" species:9601
"Pongo abelii" [GO:0019003 "GDP binding" evidence=ISS] [GO:0034332
"adherens junction organization" evidence=ISS] [GO:0045335
"phagocytic vesicle" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0034332 PROSITE:PS51419
GO:GO:0019003 HOVERGEN:HBG009351 OrthoDB:EOG4K3KX6 HSSP:P55258
GeneTree:ENSGT00700000104031 OMA:TSFFRCL CTD:51762 KO:K07902
EMBL:CR857602 RefSeq:NP_001124875.1 UniGene:Pab.18127
ProteinModelPortal:Q5REC9 SMR:Q5REC9 PRIDE:Q5REC9
Ensembl:ENSPPYT00000007720 Ensembl:ENSPPYT00000033546
GeneID:100171739 KEGG:pon:100171739 InParanoid:Q5REC9
Uniprot:Q5REC9
Length = 207
Score = 355 (130.0 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 67/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ + +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEE 160
Score = 127 (49.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 31/85 (36%), Positives = 50/85 (58%)
Query: 185 YLASLEGH-SNNIHCMAR-NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
++ ++E H S+++ M NK D D R++ E GE A + + +LETSAK+S NVE+
Sbjct: 102 WIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEA 161
Query: 242 FMQIAAELMEKLAEKLTIMHDRGVG 266
F +A ++M KL K+ + G G
Sbjct: 162 FFTLARDIMTKLNRKMNDSNSAGAG 186
>MGI|MGI:2442982 [details] [associations]
symbol:Rab8b "RAB8B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005778 "peroxisomal membrane" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO] [GO:0030911 "TPR domain binding"
evidence=ISO] [GO:0031346 "positive regulation of cell projection
organization" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0034332 "adherens junction organization"
evidence=ISO] [GO:0045046 "protein import into peroxisome membrane"
evidence=ISO] [GO:0045335 "phagocytic vesicle" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0051286 "cell tip" evidence=ISO] [GO:0051461 "positive
regulation of corticotropin secretion" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:2442982
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0048471 GO:GO:0007264 GO:GO:0051286 GO:GO:0031410
GO:GO:0005778 GO:GO:0034332 PROSITE:PS51419 GO:GO:0051461
eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351 GO:GO:0031346
GO:GO:0045046 HOGENOM:HOG000233968 OMA:TSFFRCL CTD:51762 KO:K07902
ChiTaRS:RAB8B EMBL:AK084650 EMBL:AK155621 EMBL:BC059208
IPI:IPI00411115 RefSeq:NP_775589.1 UniGene:Mm.260376
ProteinModelPortal:P61028 SMR:P61028 IntAct:P61028 STRING:P61028
PhosphoSite:P61028 PaxDb:P61028 PRIDE:P61028
Ensembl:ENSMUST00000041139 GeneID:235442 KEGG:mmu:235442
InParanoid:P61028 NextBio:382678 Bgee:P61028 CleanEx:MM_RAB8B
Genevestigator:P61028 GermOnline:ENSMUSG00000036943 Uniprot:P61028
Length = 207
Score = 355 (130.0 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 67/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ + +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEE 160
Score = 127 (49.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 31/85 (36%), Positives = 50/85 (58%)
Query: 185 YLASLEGH-SNNIHCMAR-NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
++ ++E H S+++ M NK D D R++ E GE A + + +LETSAK+S NVE+
Sbjct: 102 WIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEA 161
Query: 242 FMQIAAELMEKLAEKLTIMHDRGVG 266
F +A ++M KL K+ + G G
Sbjct: 162 FFTLARDIMTKLNRKMNDSNSSGAG 186
>RGD|628764 [details] [associations]
symbol:Rab8b "RAB8B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005778 "peroxisomal membrane"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0019003 "GDP binding" evidence=ISO;ISS] [GO:0030670 "phagocytic
vesicle membrane" evidence=IEA] [GO:0030911 "TPR domain binding"
evidence=IPI] [GO:0031346 "positive regulation of cell projection
organization" evidence=IDA] [GO:0031410 "cytoplasmic vesicle"
evidence=IDA] [GO:0034332 "adherens junction organization"
evidence=IDA] [GO:0045046 "protein import into peroxisome membrane"
evidence=IEA;ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO;ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0051286 "cell tip" evidence=IDA] [GO:0051461
"positive regulation of corticotropin secretion" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:628764 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0048471
GO:GO:0007264 GO:GO:0051286 GO:GO:0031410 GO:GO:0005778
GO:GO:0034332 PROSITE:PS51419 GO:GO:0051461 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 GO:GO:0031346 GO:GO:0045046
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104031 OMA:TSFFRCL
CTD:51762 KO:K07902 EMBL:U53475 IPI:IPI00189690 RefSeq:NP_695229.1
UniGene:Rn.10995 ProteinModelPortal:P70550 SMR:P70550 IntAct:P70550
STRING:P70550 PhosphoSite:P70550 PRIDE:P70550
Ensembl:ENSRNOT00000024286 GeneID:266688 KEGG:rno:266688
UCSC:RGD:628764 InParanoid:P70550 NextBio:624500
ArrayExpress:P70550 Genevestigator:P70550
GermOnline:ENSRNOG00000018009 Uniprot:P70550
Length = 207
Score = 355 (130.0 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 67/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ + +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEE 160
Score = 127 (49.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 31/85 (36%), Positives = 50/85 (58%)
Query: 185 YLASLEGH-SNNIHCMAR-NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
++ ++E H S+++ M NK D D R++ E GE A + + +LETSAK+S NVE+
Sbjct: 102 WIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEA 161
Query: 242 FMQIAAELMEKLAEKLTIMHDRGVG 266
F +A ++M KL K+ + G G
Sbjct: 162 FFTLARDIMTKLNRKMNDSNSSGAG 186
>UNIPROTKB|P70550 [details] [associations]
symbol:Rab8b "Ras-related protein Rab-8B" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:628764 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0048471 GO:GO:0007264 GO:GO:0051286
GO:GO:0031410 GO:GO:0005778 GO:GO:0034332 PROSITE:PS51419
GO:GO:0051461 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
GO:GO:0031346 GO:GO:0045046 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104031 OMA:TSFFRCL CTD:51762 KO:K07902
EMBL:U53475 IPI:IPI00189690 RefSeq:NP_695229.1 UniGene:Rn.10995
ProteinModelPortal:P70550 SMR:P70550 IntAct:P70550 STRING:P70550
PhosphoSite:P70550 PRIDE:P70550 Ensembl:ENSRNOT00000024286
GeneID:266688 KEGG:rno:266688 UCSC:RGD:628764 InParanoid:P70550
NextBio:624500 ArrayExpress:P70550 Genevestigator:P70550
GermOnline:ENSRNOG00000018009 Uniprot:P70550
Length = 207
Score = 355 (130.0 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 67/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ + +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEE 160
Score = 127 (49.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 31/85 (36%), Positives = 50/85 (58%)
Query: 185 YLASLEGH-SNNIHCMAR-NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
++ ++E H S+++ M NK D D R++ E GE A + + +LETSAK+S NVE+
Sbjct: 102 WIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEA 161
Query: 242 FMQIAAELMEKLAEKLTIMHDRGVG 266
F +A ++M KL K+ + G G
Sbjct: 162 FFTLARDIMTKLNRKMNDSNSSGAG 186
>UNIPROTKB|Q92930 [details] [associations]
symbol:RAB8B "Ras-related protein Rab-8B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0030911 "TPR domain
binding" evidence=IEA] [GO:0031346 "positive regulation of cell
projection organization" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0051286 "cell tip"
evidence=IEA] [GO:0051461 "positive regulation of corticotropin
secretion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0015031 "protein transport" evidence=NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0034332 "adherens junction
organization" evidence=ISS] [GO:0005102 "receptor binding"
evidence=IPI] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0045046 "protein import into peroxisome membrane" evidence=IDA]
[GO:0005778 "peroxisomal membrane" evidence=IDA] [GO:0019003 "GDP
binding" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=NAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0048471 GO:GO:0007264 GO:GO:0051286 GO:GO:0003924
GO:GO:0031410 GO:GO:0005778 GO:GO:0034332 PROSITE:PS51419
GO:GO:0051461 EMBL:AC016207 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 GO:GO:0031346 GO:GO:0045046 HOGENOM:HOG000233968
OrthoDB:EOG4K3KX6 OMA:TSFFRCL CTD:51762 KO:K07902 EMBL:AB038995
EMBL:AK001111 EMBL:AL833365 EMBL:BC020654 EMBL:U66624
IPI:IPI00024282 RefSeq:NP_057614.1 UniGene:Hs.389733
ProteinModelPortal:Q92930 SMR:Q92930 IntAct:Q92930 STRING:Q92930
PhosphoSite:Q92930 DMDM:13638434 PaxDb:Q92930 PeptideAtlas:Q92930
PRIDE:Q92930 DNASU:51762 Ensembl:ENST00000321437 GeneID:51762
KEGG:hsa:51762 UCSC:uc002alz.3 GeneCards:GC15P063481
HGNC:HGNC:30273 MIM:613532 neXtProt:NX_Q92930 PharmGKB:PA134944620
InParanoid:Q92930 PhylomeDB:Q92930 ChiTaRS:RAB8B GenomeRNAi:51762
NextBio:55874 ArrayExpress:Q92930 Bgee:Q92930 CleanEx:HS_RAB8B
Genevestigator:Q92930 GermOnline:ENSG00000166128 Uniprot:Q92930
Length = 207
Score = 355 (130.0 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 67/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ + +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEE 160
Score = 126 (49.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 31/85 (36%), Positives = 50/85 (58%)
Query: 185 YLASLEGH-SNNIHCMAR-NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
++ ++E H S+++ M NK D D R++ E GE A + + +LETSAK+S NVE+
Sbjct: 102 WIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEA 161
Query: 242 FMQIAAELMEKLAEKLTIMHDRGVG 266
F +A ++M KL K+ + G G
Sbjct: 162 FFTLARDIMTKLNRKMNDSNSAGAG 186
>ZFIN|ZDB-GENE-070620-16 [details] [associations]
symbol:rab8b "RAB8B, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-070620-16 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6
GeneTree:ENSGT00700000104031 CTD:51762 KO:K07902 EMBL:CR450827
EMBL:BC142846 IPI:IPI00854251 RefSeq:NP_001092729.1
UniGene:Dr.151937 SMR:A5PLC7 Ensembl:ENSDART00000099327
GeneID:100093706 KEGG:dre:100093706 OMA:RSRGDYD NextBio:20788636
Uniprot:A5PLC7
Length = 209
Score = 355 (130.0 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 67/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ + +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEE 160
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 30/85 (35%), Positives = 51/85 (60%)
Query: 185 YLASLEGH-SNNIHCMAR-NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
++ ++E H S+++ M NK D D R++ E GE A + + +LETSAK+S NVE+
Sbjct: 102 WIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEA 161
Query: 242 FMQIAAELMEKLAEKLTIMHDRGVG 266
F+ +A ++M +L K+ + G G
Sbjct: 162 FVTLARDIMTRLNRKMNENNPSGGG 186
>UNIPROTKB|H0YNE9 [details] [associations]
symbol:RAB8B "Ras-related protein Rab-8B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AC016207
HGNC:HGNC:30273 ChiTaRS:RAB8B Ensembl:ENST00000559006 Bgee:H0YNE9
Uniprot:H0YNE9
Length = 188
Score = 355 (130.0 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 67/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G +D + S K+ + +E
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEE 160
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 185 YLASLEGH-SNNIHCMAR-NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKL 241
++ ++E H S+++ M NK D D R++ E GE A + + +LETSAK+S NVE+
Sbjct: 102 WIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEA 161
Query: 242 FMQIAAELMEKLAEKL 257
F +A ++M KL K+
Sbjct: 162 FFTLARDIMTKLNRKM 177
>UNIPROTKB|Q2HJH2 [details] [associations]
symbol:RAB1B "Ras-related protein Rab-1B" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=ISS] [GO:0016020
"membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0007264 GO:GO:0016020
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
OrthoDB:EOG48D0WM EMBL:BC105393 IPI:IPI00727050
RefSeq:NP_001069701.1 UniGene:Bt.59545 ProteinModelPortal:Q2HJH2
SMR:Q2HJH2 PRIDE:Q2HJH2 GeneID:540685 KEGG:bta:540685 CTD:81876
InParanoid:Q2HJH2 KO:K07875 NextBio:20878772 Uniprot:Q2HJH2
Length = 201
Score = 355 (130.0 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 74/163 (45%), Positives = 112/163 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 123 GL---KIVN-----EMASAAGLLCTVDPALATALASDKTDLDE 157
L K+V+ E A + G+ P L T+ A + T++++
Sbjct: 124 DLTTKKVVDNTTAKEFADSLGI-----PFLETS-AKNATNVEQ 160
>UNIPROTKB|F1PVP9 [details] [associations]
symbol:RAB1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104049 OMA:MIMASEI EMBL:AAEX03011629
Ensembl:ENSCAFT00000020406 Uniprot:F1PVP9
Length = 203
Score = 355 (130.0 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 74/163 (45%), Positives = 112/163 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 6 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 65
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S
Sbjct: 66 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 125
Query: 123 GL---KIVN-----EMASAAGLLCTVDPALATALASDKTDLDE 157
L K+V+ E A + G+ P L T+ A + T++++
Sbjct: 126 DLTTKKVVDNTTAKEFADSLGI-----PFLETS-AKNATNVEQ 162
>UNIPROTKB|Q9H0U4 [details] [associations]
symbol:RAB1B "Ras-related protein Rab-1B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005525 "GTP binding" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005794 Reactome:REACT_115566 GO:GO:0007264
Reactome:REACT_21300 GO:GO:0016020 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 PDB:3JZA PDBsum:3JZA
HOGENOM:HOG000233968 OrthoDB:EOG48D0WM CTD:81876 KO:K07875
OMA:MIMASEI EMBL:AF092437 EMBL:AL136635 EMBL:AK292086 EMBL:AK315333
EMBL:BC071169 IPI:IPI00008964 RefSeq:NP_112243.1 UniGene:Hs.300816
PDB:3NKV PDB:4HLQ PDB:4I1O PDBsum:3NKV PDBsum:4HLQ PDBsum:4I1O
ProteinModelPortal:Q9H0U4 SMR:Q9H0U4 DIP:DIP-42462N IntAct:Q9H0U4
MINT:MINT-1343701 STRING:Q9H0U4 PhosphoSite:Q9H0U4 DMDM:23396834
PaxDb:Q9H0U4 PeptideAtlas:Q9H0U4 PRIDE:Q9H0U4 DNASU:81876
Ensembl:ENST00000311481 GeneID:81876 KEGG:hsa:81876 UCSC:uc001ohf.3
GeneCards:GC11P066036 H-InvDB:HIX0034908 H-InvDB:HIX0128663
HGNC:HGNC:18370 HPA:CAB010225 MIM:612565 neXtProt:NX_Q9H0U4
PharmGKB:PA34108 InParanoid:Q9H0U4 PhylomeDB:Q9H0U4 ChiTaRS:RAB1B
EvolutionaryTrace:Q9H0U4 GenomeRNAi:81876 NextBio:72222
ArrayExpress:Q9H0U4 Bgee:Q9H0U4 CleanEx:HS_RAB1B
Genevestigator:Q9H0U4 GermOnline:ENSG00000174903 Uniprot:Q9H0U4
Length = 201
Score = 355 (130.0 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 74/163 (45%), Positives = 112/163 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 123 GL---KIVN-----EMASAAGLLCTVDPALATALASDKTDLDE 157
L K+V+ E A + G+ P L T+ A + T++++
Sbjct: 124 DLTTKKVVDNTTAKEFADSLGI-----PFLETS-AKNATNVEQ 160
>UNIPROTKB|Q5RE13 [details] [associations]
symbol:RAB1B "Ras-related protein Rab-1B" species:9601
"Pongo abelii" [GO:0005525 "GTP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0007264 GO:GO:0016020
GO:GO:0015031 PROSITE:PS51419 HOVERGEN:HBG009351 CTD:81876
KO:K07875 HSSP:P62820 EMBL:CR857726 RefSeq:NP_001127221.1
UniGene:Pab.14281 ProteinModelPortal:Q5RE13 SMR:Q5RE13 PRIDE:Q5RE13
GeneID:100174276 KEGG:pon:100174276 InParanoid:Q5RE13
Uniprot:Q5RE13
Length = 201
Score = 355 (130.0 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 74/163 (45%), Positives = 112/163 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 123 GL---KIVN-----EMASAAGLLCTVDPALATALASDKTDLDE 157
L K+V+ E A + G+ P L T+ A + T++++
Sbjct: 124 DLTTKKVVDNTTAKEFADSLGI-----PFLETS-AKNATNVEQ 160
>UNIPROTKB|E2RLP0 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104049 EMBL:AAEX03014730 EMBL:AAEX03014731
EMBL:AAEX03014732 Ensembl:ENSCAFT00000016115 Uniprot:E2RLP0
Length = 201
Score = 310 (114.2 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 60/117 (51%), Positives = 81/117 (69%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY LFK++++G++GV K+ L+ RF F TIGVDF I+TVEIN E++KLQIWD
Sbjct: 4 DYDHLFKLLIIGDSGVVKSSLLLRFADNTFSASILTTIGVDFKIRTVEINGEKVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR H +I+VYD++ +F + WL EI + V R+LVG
Sbjct: 64 TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVG 119
Score = 70 (29.7 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 25/81 (30%), Positives = 38/81 (46%)
Query: 202 NKIDREDREI-PTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTIM 260
NK D +R++ TE FA + + ETSAK + NVE++F I ++ + L
Sbjct: 120 NKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179
Query: 261 HDR---GVGMLTRIYNIKKAC 278
+ V LT+ KK C
Sbjct: 180 QQQQQNDVVKLTKNSKRKKRC 200
>UNIPROTKB|O95716 [details] [associations]
symbol:RAB3D "Ras-related protein Rab-3D" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0006887 "exocytosis" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0017157 "regulation of exocytosis" evidence=IEA] [GO:0018125
"peptidyl-cysteine methylation" evidence=IEA] [GO:0030133
"transport vesicle" evidence=IEA] [GO:0042588 "zymogen granule"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0006184 "GTP catabolic process"
evidence=TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0006887
PROSITE:PS51419 GO:GO:0030133 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 GO:GO:0042588 GO:GO:0018125 HOGENOM:HOG000233968
OrthoDB:EOG4TB4C6 EMBL:AF081353 EMBL:AF498933 EMBL:BC016471
IPI:IPI00032808 RefSeq:NP_004274.1 UniGene:Hs.731663 PDB:2GF9
PDBsum:2GF9 ProteinModelPortal:O95716 SMR:O95716 IntAct:O95716
STRING:O95716 PhosphoSite:O95716 PaxDb:O95716 PRIDE:O95716
DNASU:9545 Ensembl:ENST00000222120 GeneID:9545 KEGG:hsa:9545
UCSC:uc002mqx.3 CTD:9545 GeneCards:GC19M011435 HGNC:HGNC:9779
HPA:CAB018067 MIM:604350 neXtProt:NX_O95716 PharmGKB:PA34134
InParanoid:O95716 KO:K07884 OMA:GKGPTLG PhylomeDB:O95716
EvolutionaryTrace:O95716 GenomeRNAi:9545 NextBio:35795 Bgee:O95716
CleanEx:HS_RAB3D Genevestigator:O95716 GermOnline:ENSG00000105514
Uniprot:O95716
Length = 219
Score = 296 (109.3 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 54/124 (43%), Positives = 85/124 (68%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++L+GN+ VGKT + R+ F P +T+G+DF +KTV +++RIKLQIW
Sbjct: 17 QNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIW 76
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQER+R+IT +YYR A +L+YDI+ Q +F + DW +I+ Y+ +LVG
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNK 136
Query: 122 SGLK 125
L+
Sbjct: 137 CDLE 140
Score = 84 (34.6 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D ED R +P E G A + E SAK + NV+++F ++ + EK+ E L
Sbjct: 135 NKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESL 191
>FB|FBgn0086913 [details] [associations]
symbol:Rab26 "Rab26" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=ISS] [GO:0031226 "intrinsic to plasma membrane"
evidence=ISS] [GO:0017157 "regulation of exocytosis" evidence=ISS]
[GO:0031982 "vesicle" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
EMBL:AE014296 GO:GO:0015031 GO:GO:0031226 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0017157 GeneTree:ENSGT00700000104031 CTD:25837
EMBL:AY061826 RefSeq:NP_649303.2 UniGene:Dm.1033 HSSP:Q9ULW5
ProteinModelPortal:Q9VP48 SMR:Q9VP48 IntAct:Q9VP48 MINT:MINT-315772
PaxDb:Q9VP48 PRIDE:Q9VP48 EnsemblMetazoa:FBtr0112677 GeneID:40359
KEGG:dme:Dmel_CG34410 UCSC:CG34410-RB FlyBase:FBgn0086913
InParanoid:Q9VP48 OMA:THHDDAS OrthoDB:EOG4FFBHX GenomeRNAi:40359
NextBio:818369 Bgee:Q9VP48 Uniprot:Q9VP48
Length = 388
Score = 295 (108.9 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 56/112 (50%), Positives = 79/112 (70%)
Query: 9 KVVLVGNAGVGKTCLVRRFTQGVFPPGQ-GATIGVDFMIKTVEINNERIKLQIWDTAGQE 67
K +L+G++GVGKT + ++ G F G AT+G+ K V ++ R+KLQIWDTAGQE
Sbjct: 192 KTILLGDSGVGKTSFLVKYNTGEFRLGSFSATVGIALTNKVVVVDGTRVKLQIWDTAGQE 251
Query: 68 RFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
RFRS+T +YYR AHAL+L+YD++ + T+D + WL EI EYA V+ VL+G
Sbjct: 252 RFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIG 303
Score = 85 (35.0 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 202 NKID--REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEK 252
NK D +R++ E GE + H++ ++ETSAK NVE F +A +L +
Sbjct: 304 NKADCSGSERQVKREDGERLGREHNVPFMETSAKTGLNVELSFTAVARQLKSR 356
>MGI|MGI:1923558 [details] [associations]
symbol:Rab1b "RAB1B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1923558
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005794
GO:GO:0007264 GO:GO:0016020 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 OrthoDB:EOG48D0WM CTD:81876 KO:K07875
OMA:MIMASEI ChiTaRS:RAB1B EMBL:AK003609 EMBL:AK156726 EMBL:BC016408
IPI:IPI00133706 RefSeq:NP_083852.1 UniGene:Mm.182563
ProteinModelPortal:Q9D1G1 SMR:Q9D1G1 STRING:Q9D1G1
PhosphoSite:Q9D1G1 PaxDb:Q9D1G1 PRIDE:Q9D1G1
Ensembl:ENSMUST00000025804 GeneID:76308 KEGG:mmu:76308
InParanoid:Q9D1G1 NextBio:344943 Bgee:Q9D1G1 CleanEx:MM_RAB1B
Genevestigator:Q9D1G1 GermOnline:ENSMUSG00000024870 Uniprot:Q9D1G1
Length = 201
Score = 354 (129.7 bits), Expect = 1.5e-31, P = 1.5e-31
Identities = 71/158 (44%), Positives = 108/158 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 123 GL---KIVNEMASAAGLLCTVDPALATALASDKTDLDE 157
L K+V+ + P L T+ A + T++++
Sbjct: 124 DLTTKKVVDNTTAKEFADSLGVPFLETS-AKNATNVEQ 160
>RGD|1642882 [details] [associations]
symbol:Rab1b "RAB1B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA;ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005794 "Golgi
apparatus" evidence=IEA;ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:1642882 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 EMBL:CH473953 EMBL:CH473966 CTD:81876 KO:K07875
UniGene:Rn.155100 RefSeq:NP_001103449.1 RefSeq:XP_002727643.2
SMR:G3V6H0 Ensembl:ENSRNOT00000004991 Ensembl:ENSRNOT00000027486
GeneID:100126191 GeneID:100363782 KEGG:rno:100126191
KEGG:rno:100363782 NextBio:20789017 Uniprot:G3V6H0
Length = 201
Score = 354 (129.7 bits), Expect = 1.5e-31, P = 1.5e-31
Identities = 71/158 (44%), Positives = 108/158 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 123 GL---KIVNEMASAAGLLCTVDPALATALASDKTDLDE 157
L K+V+ + P L T+ A + T++++
Sbjct: 124 DLTTKKVVDNTTAKEFADSLGVPFLETS-AKNATNVEQ 160
>WB|WBGene00004266 [details] [associations]
symbol:rab-1 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0006915
GO:GO:0007264 GO:GO:0002119 GO:GO:0015031 GO:GO:0018996
GO:GO:0040011 GO:GO:0048477 HOGENOM:HOG000233968 HSSP:P07560
GeneTree:ENSGT00700000104049 KO:K07874 OMA:NRVGPPS EMBL:FO080829
PIR:T33781 RefSeq:NP_503397.1 ProteinModelPortal:Q9UAQ6 SMR:Q9UAQ6
DIP:DIP-24638N IntAct:Q9UAQ6 MINT:MINT-1101433 STRING:Q9UAQ6
EnsemblMetazoa:C39F7.4.1 EnsemblMetazoa:C39F7.4.2 GeneID:178620
KEGG:cel:CELE_C39F7.4 UCSC:C39F7.4.1 CTD:178620 WormBase:C39F7.4
InParanoid:Q9UAQ6 NextBio:901876 ArrayExpress:Q9UAQ6 Uniprot:Q9UAQ6
Length = 205
Score = 354 (129.7 bits), Expect = 1.5e-31, P = 1.5e-31
Identities = 75/160 (46%), Positives = 108/160 (67%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYDI+ Q TF+ + WL+EI+ YA V ++LVG
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKC 126
Query: 123 GL---KIVNEMASA--AGLLCTVDPALATALASDKTDLDE 157
L + V A+ AG L P L T+ A T++++
Sbjct: 127 DLTAKRAVETQAAQDYAGQLGI--PFLETS-AKSSTNVEQ 163
>ZFIN|ZDB-GENE-040801-62 [details] [associations]
symbol:rab35 "RAB35, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040801-62 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
CTD:11021 KO:K07876 EMBL:BC077124 IPI:IPI00919647
RefSeq:NP_001003548.1 UniGene:Dr.14855 ProteinModelPortal:Q6DEJ0
SMR:Q6DEJ0 GeneID:445154 KEGG:dre:445154 InParanoid:Q6DEJ0
NextBio:20831916 ArrayExpress:Q6DEJ0 Uniprot:Q6DEJ0
Length = 201
Score = 317 (116.6 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 59/117 (50%), Positives = 82/117 (70%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY LFK++++G++GVGK+ L+ RF F TIGVDF I+TVE+N E++KLQIWD
Sbjct: 4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVELNGEKVKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFR+IT +YYR H +++VYD++ +F + WL EI + V R+LVG
Sbjct: 64 TAGQERFRTITSTYYRGTHGVVVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVG 119
Score = 61 (26.5 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 205 DREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTI 259
D + + T + FA++ + ETSAK + NVE++F I EL+ + A+K ++
Sbjct: 124 DPNSKVVETNDAQKFAEQMGISLFETSAKENVNVEEMFNCIT-ELVLR-AKKESV 176
>RGD|1359415 [details] [associations]
symbol:Rab1b-ps1 "RAB1B, member RAS oncogene family, pseudogene
1" species:10116 "Rattus norvegicus" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:1359415 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
GO:GO:0007264 GO:GO:0016020 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
OrthoDB:EOG48D0WM EMBL:X13905 IPI:IPI00480673 PIR:S06147
UniGene:Rn.155100 ProteinModelPortal:P10536 SMR:P10536
IntAct:P10536 PhosphoSite:P10536 PRIDE:P10536 InParanoid:P10536
Genevestigator:P10536 GermOnline:ENSRNOG00000003753
GermOnline:ENSRNOG00000020253 Uniprot:P10536
Length = 201
Score = 353 (129.3 bits), Expect = 1.9e-31, P = 1.9e-31
Identities = 70/158 (44%), Positives = 108/158 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR++T SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 123 GL---KIVNEMASAAGLLCTVDPALATALASDKTDLDE 157
L K+V+ + P L T+ A + T++++
Sbjct: 124 DLTTKKVVDNTTAKEFADSLGVPFLETS-AKNATNVEQ 160
>TAIR|locus:2075251 [details] [associations]
symbol:RABE1c species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0009873 "ethylene mediated signaling pathway"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006007 "glucose catabolic process" evidence=RCA] [GO:0042732
"D-xylose metabolic process" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005774 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0007264
GO:GO:0000139 GO:GO:0009873 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 EMBL:AL355775 HOGENOM:HOG000233968 OMA:WKSKCCS
KO:K07901 EMBL:D01025 EMBL:AY035132 EMBL:AY042795 EMBL:BT001952
EMBL:BT002186 IPI:IPI00518866 PIR:JS0640 RefSeq:NP_001078248.1
RefSeq:NP_001118780.1 RefSeq:NP_190192.1 UniGene:At.258
ProteinModelPortal:P28186 SMR:P28186 IntAct:P28186 STRING:P28186
PaxDb:P28186 PRIDE:P28186 EnsemblPlants:AT3G46060.1
EnsemblPlants:AT3G46060.2 EnsemblPlants:AT3G46060.3 GeneID:823749
KEGG:ath:AT3G46060 TAIR:At3g46060 InParanoid:P28186
PhylomeDB:P28186 ProtClustDB:CLSN2684795 Genevestigator:P28186
GermOnline:AT3G46060 Uniprot:P28186
Length = 216
Score = 353 (129.3 bits), Expect = 1.9e-31, P = 1.9e-31
Identities = 68/158 (43%), Positives = 109/158 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG +
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 123 GL-KIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ + + +A G + + S KT+L+ +E
Sbjct: 131 DMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEE 168
>ZFIN|ZDB-GENE-040426-873 [details] [associations]
symbol:rab1ba "zRAB1B, member RAS oncogene family
a" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040426-873
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P07560
GeneTree:ENSGT00700000104049 OrthoDB:EOG48D0WM KO:K07875
OMA:IDSTPVR EMBL:CABZ01038439 EMBL:CABZ01038440 EMBL:CU570987
EMBL:BC047816 IPI:IPI00491824 RefSeq:NP_957436.1 UniGene:Dr.78500
SMR:Q7ZUV5 STRING:Q7ZUV5 Ensembl:ENSDART00000055810 GeneID:394117
KEGG:dre:394117 CTD:394117 InParanoid:Q7ZUV5 NextBio:20815071
Uniprot:Q7ZUV5
Length = 201
Score = 353 (129.3 bits), Expect = 1.9e-31, P = 1.9e-31
Identities = 70/158 (44%), Positives = 108/158 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +++ + WL+EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIDRYASENVNKLLVGNKC 123
Query: 123 GL---KIVNEMASAAGLLCTVDPALATALASDKTDLDE 157
L K+V+ + P L T+ A + T++++
Sbjct: 124 DLTTKKVVDYTTAKEFADSLAIPFLETS-AKNATNVEQ 160
>MGI|MGI:97844 [details] [associations]
symbol:Rab3d "RAB3D, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006887 "exocytosis" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IDA] [GO:0018125 "peptidyl-cysteine methylation"
evidence=IDA] [GO:0030133 "transport vesicle" evidence=ISO]
[GO:0042588 "zymogen granule" evidence=IDA] [GO:0051020 "GTPase
binding" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:97844 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 GO:GO:0006887
PROSITE:PS51419 GO:GO:0030133 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 GO:GO:0042588 GO:GO:0018125 HOGENOM:HOG000233968
OrthoDB:EOG4TB4C6 CTD:9545 KO:K07884 OMA:GKGPTLG EMBL:M89777
EMBL:AF263365 EMBL:AF263366 EMBL:BC010779 EMBL:BC020010
IPI:IPI00116688 PIR:A45384 RefSeq:NP_114080.2 UniGene:Mm.260157
ProteinModelPortal:P35276 SMR:P35276 IntAct:P35276 STRING:P35276
PhosphoSite:P35276 PaxDb:P35276 PRIDE:P35276
Ensembl:ENSMUST00000115351 Ensembl:ENSMUST00000122211 GeneID:19340
KEGG:mmu:19340 InParanoid:P35276 NextBio:296343 Bgee:P35276
CleanEx:MM_RAB3D Genevestigator:P35276
GermOnline:ENSMUSG00000019066 Uniprot:P35276
Length = 219
Score = 297 (109.6 bits), Expect = 2.9e-31, Sum P(2) = 2.9e-31
Identities = 54/124 (43%), Positives = 85/124 (68%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++L+GN+ VGKT + R+ F P +T+G+DF +KTV +++RIKLQIW
Sbjct: 17 QNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIW 76
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQER+R+IT +YYR A +L+YDI+ Q +F + DW +I+ Y+ +LVG
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNK 136
Query: 122 SGLK 125
L+
Sbjct: 137 CDLE 140
Score = 80 (33.2 bits), Expect = 2.9e-31, Sum P(2) = 2.9e-31
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D ED R +P E G A + E SAK + NV+++F ++ + +K+ E L
Sbjct: 135 NKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDIICDKMNESL 191
>UNIPROTKB|G3MYN4 [details] [associations]
symbol:RAB1B "Ras-related protein Rab-1B" species:9913 "Bos
taurus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 GeneTree:ENSGT00700000104049
OMA:MIMASEI EMBL:DAAA02063587 Ensembl:ENSBTAT00000064628
Uniprot:G3MYN4
Length = 197
Score = 351 (128.6 bits), Expect = 3.2e-31, P = 3.2e-31
Identities = 74/172 (43%), Positives = 115/172 (66%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAG 65
+LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWDTAG
Sbjct: 2 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAG 61
Query: 66 QERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSGL- 124
QERFR+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V +++VG S L
Sbjct: 62 QERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLIVGNKSDLT 121
Query: 125 --KIVN-----EMASAAGLLCTVDPALATALASDKTDLDEDEHVLACLLMVF 169
K+V+ E A + G+ P L T+ A + T++++ +A + +F
Sbjct: 122 TKKVVDNTTAKEFADSLGI-----PFLRTS-AKNATNVEQAFMTMAAEIKIF 167
>UNIPROTKB|Q4R8X3 [details] [associations]
symbol:RAB1B "Ras-related protein Rab-1B" species:9541
"Macaca fascicularis" [GO:0005525 "GTP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0007264 GO:GO:0016020
GO:GO:0015031 PROSITE:PS51419 HOVERGEN:HBG009351 EMBL:AB168324
HSSP:P62820 ProteinModelPortal:Q4R8X3 SMR:Q4R8X3 PRIDE:Q4R8X3
Uniprot:Q4R8X3
Length = 201
Score = 351 (128.6 bits), Expect = 3.2e-31, P = 3.2e-31
Identities = 73/163 (44%), Positives = 112/163 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + ++ + WL+EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 123 GL---KIVN-----EMASAAGLLCTVDPALATALASDKTDLDE 157
L K+V+ E A + G+ P L T+ A + T++++
Sbjct: 124 DLTTKKVVDNTTAKEFADSLGI-----PFLETS-AKNATNVEQ 160
>UNIPROTKB|P20337 [details] [associations]
symbol:RAB3B "Ras-related protein Rab-3B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0017157 "regulation of exocytosis" evidence=IEA] [GO:0018125
"peptidyl-cysteine methylation" evidence=IEA] [GO:0030141
"secretory granule" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0008021 GO:GO:0030141 GO:GO:0003924
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0017157
EMBL:AL445685 GO:GO:0018125 EMBL:AL589663 HOGENOM:HOG000233968
OrthoDB:EOG4TB4C6 CTD:5865 KO:K06108 OMA:WFDFFEA EMBL:M28214
EMBL:AF498932 EMBL:BC005035 IPI:IPI00300562 PIR:D34323
RefSeq:NP_002858.2 UniGene:Hs.123072 PDB:3DZ8 PDBsum:3DZ8
ProteinModelPortal:P20337 SMR:P20337 STRING:P20337
PhosphoSite:P20337 DMDM:38258903 PaxDb:P20337 PeptideAtlas:P20337
PRIDE:P20337 DNASU:5865 Ensembl:ENST00000371655
Ensembl:ENST00000537650 GeneID:5865 KEGG:hsa:5865 UCSC:uc001cth.3
GeneCards:GC01M052373 HGNC:HGNC:9778 HPA:CAB023293 HPA:HPA003159
MIM:179510 neXtProt:NX_P20337 PharmGKB:PA34133 InParanoid:P20337
PhylomeDB:P20337 EvolutionaryTrace:P20337 GenomeRNAi:5865
NextBio:22778 Bgee:P20337 CleanEx:HS_RAB3B Genevestigator:P20337
GermOnline:ENSG00000169213 Uniprot:P20337
Length = 219
Score = 294 (108.6 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
Identities = 51/118 (43%), Positives = 83/118 (70%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F P +T+G+DF +KTV + +R+KLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIW 76
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW +I+ Y+ +LVG
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVG 134
Score = 82 (33.9 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 202 NKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D E+R +PTE G+ A++ + E SAK + +V + F ++ + +K+++ L
Sbjct: 135 NKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSL 191
>UNIPROTKB|E1C105 [details] [associations]
symbol:RAB3C "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 GO:GO:0017157 GeneTree:ENSGT00690000101942
EMBL:AADN02045695 EMBL:AADN02045696 EMBL:AADN02045697
EMBL:AADN02045698 EMBL:AADN02045699 EMBL:AADN02045700
EMBL:AADN02045701 EMBL:AADN02054671 EMBL:AADN02054672
EMBL:AADN02054673 EMBL:AADN02054674 EMBL:AADN02054675
EMBL:AADN02054676 EMBL:AADN02054677 IPI:IPI00599950
Ensembl:ENSGALT00000023749 OMA:SEAMSHS Uniprot:E1C105
Length = 212
Score = 288 (106.4 bits), Expect = 4.0e-31, Sum P(2) = 4.0e-31
Identities = 52/118 (44%), Positives = 82/118 (69%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F +T+G+DF +KTV N +RIKLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIW 76
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW +I+ Y+ +LVG
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVG 134
Score = 88 (36.0 bits), Expect = 4.0e-31, Sum P(2) = 4.0e-31
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D ED R I TE G+ A++ + ETSAK + NV++ F ++ + +K++E L
Sbjct: 135 NKCDMEDERVIFTERGKHLAEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 191
>UNIPROTKB|P10949 [details] [associations]
symbol:RAB3C "Ras-related protein Rab-3C" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0017157
"regulation of exocytosis" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 HOGENOM:HOG000233968 GeneTree:ENSGT00690000101942
OrthoDB:EOG4TB4C6 EMBL:M19887 EMBL:BC112795 IPI:IPI00713835
PIR:C29224 RefSeq:NP_001040071.1 RefSeq:NP_789862.1
UniGene:Bt.91125 ProteinModelPortal:P10949 SMR:P10949 PRIDE:P10949
Ensembl:ENSBTAT00000009611 GeneID:338100 GeneID:617600
KEGG:bta:338100 KEGG:bta:617600 CTD:115827 InParanoid:P10949
KO:K07883 OMA:QMASSQD NextBio:20812538 ArrayExpress:P10949
Uniprot:P10949
Length = 227
Score = 288 (106.4 bits), Expect = 4.0e-31, Sum P(2) = 4.0e-31
Identities = 52/118 (44%), Positives = 82/118 (69%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F +T+G+DF +KTV N +RIKLQIW
Sbjct: 25 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIW 84
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW +I+ Y+ +LVG
Sbjct: 85 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVG 142
Score = 88 (36.0 bits), Expect = 4.0e-31, Sum P(2) = 4.0e-31
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D ED R I TE G+ ++ + ETSAK + NV++ F ++ + +K++E L
Sbjct: 143 NKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 199
>UNIPROTKB|E2QSW2 [details] [associations]
symbol:RAB3C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101942 EMBL:AAEX03001448
ProteinModelPortal:E2QSW2 Ensembl:ENSCAFT00000006096 Uniprot:E2QSW2
Length = 225
Score = 288 (106.4 bits), Expect = 4.0e-31, Sum P(2) = 4.0e-31
Identities = 52/118 (44%), Positives = 82/118 (69%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F +T+G+DF +KTV N +RIKLQIW
Sbjct: 23 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIW 82
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW +I+ Y+ +LVG
Sbjct: 83 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVG 140
Score = 88 (36.0 bits), Expect = 4.0e-31, Sum P(2) = 4.0e-31
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D ED R I TE G+ ++ + ETSAK + NV++ F ++ + +K++E L
Sbjct: 141 NKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 197
>UNIPROTKB|E2RC93 [details] [associations]
symbol:RAB3C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0017157 "regulation of exocytosis"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 GO:GO:0017157 GeneTree:ENSGT00690000101942
OMA:QMASSQD EMBL:AAEX03001448 EMBL:AAEX03001449 EMBL:AAEX03001450
ProteinModelPortal:E2RC93 Ensembl:ENSCAFT00000011237 Uniprot:E2RC93
Length = 227
Score = 288 (106.4 bits), Expect = 4.0e-31, Sum P(2) = 4.0e-31
Identities = 52/118 (44%), Positives = 82/118 (69%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F +T+G+DF +KTV N +RIKLQIW
Sbjct: 25 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIW 84
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW +I+ Y+ +LVG
Sbjct: 85 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVG 142
Score = 88 (36.0 bits), Expect = 4.0e-31, Sum P(2) = 4.0e-31
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D ED R I TE G+ ++ + ETSAK + NV++ F ++ + +K++E L
Sbjct: 143 NKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 199
>UNIPROTKB|Q96E17 [details] [associations]
symbol:RAB3C "Ras-related protein Rab-3C" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0017157 "regulation of exocytosis" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 GO:GO:0008021
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0017157
HOGENOM:HOG000233968 OrthoDB:EOG4TB4C6 HPA:HPA003160 CTD:115827
KO:K07883 OMA:QMASSQD EMBL:AY026936 EMBL:BC013033 IPI:IPI00061114
RefSeq:NP_612462.1 UniGene:Hs.482173 ProteinModelPortal:Q96E17
SMR:Q96E17 IntAct:Q96E17 STRING:Q96E17 PhosphoSite:Q96E17
DMDM:23396832 PaxDb:Q96E17 PRIDE:Q96E17 Ensembl:ENST00000282878
GeneID:115827 KEGG:hsa:115827 UCSC:uc003jrp.3 GeneCards:GC05P057914
HGNC:HGNC:30269 MIM:612829 neXtProt:NX_Q96E17 PharmGKB:PA134874100
InParanoid:Q96E17 PhylomeDB:Q96E17 GenomeRNAi:115827 NextBio:79698
Bgee:Q96E17 CleanEx:HS_RAB3C Genevestigator:Q96E17
GermOnline:ENSG00000152932 Uniprot:Q96E17
Length = 227
Score = 288 (106.4 bits), Expect = 4.0e-31, Sum P(2) = 4.0e-31
Identities = 52/118 (44%), Positives = 82/118 (69%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F +T+G+DF +KTV N +RIKLQIW
Sbjct: 25 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIW 84
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW +I+ Y+ +LVG
Sbjct: 85 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVG 142
Score = 88 (36.0 bits), Expect = 4.0e-31, Sum P(2) = 4.0e-31
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D ED R I TE G+ ++ + ETSAK + NV++ F ++ + +K++E L
Sbjct: 143 NKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 199
>UNIPROTKB|F1SLJ0 [details] [associations]
symbol:RAB3C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0017157 "regulation of exocytosis" evidence=IEA]
[GO:0008021 "synaptic vesicle" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 GO:GO:0017157 GeneTree:ENSGT00690000101942 KO:K07883
OMA:QMASSQD EMBL:CU914321 EMBL:CU914659 EMBL:FP565241
RefSeq:XP_003359827.2 Ensembl:ENSSSCT00000018435 GeneID:100523703
KEGG:ssc:100523703 Uniprot:F1SLJ0
Length = 225
Score = 288 (106.4 bits), Expect = 4.0e-31, Sum P(2) = 4.0e-31
Identities = 52/118 (44%), Positives = 82/118 (69%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F +T+G+DF +KTV N +RIKLQIW
Sbjct: 23 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIW 82
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW +I+ Y+ +LVG
Sbjct: 83 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVG 140
Score = 88 (36.0 bits), Expect = 4.0e-31, Sum P(2) = 4.0e-31
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D ED R I TE G+ ++ + ETSAK + NV++ F ++ + +K++E L
Sbjct: 141 NKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 197
>DICTYBASE|DDB_G0276399 [details] [associations]
symbol:rab8B "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0031157 "regulation of aggregate
size involved in sorocarp development" evidence=IMP] [GO:0016339
"calcium-dependent cell-cell adhesion" evidence=IMP] [GO:0005525
"GTP binding" evidence=IEA;ISS] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0276399
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GenomeReviews:CM000151_GR PROSITE:PS51419
GO:GO:0016339 GO:GO:0031157 eggNOG:COG1100 EMBL:AAFI02000015
KO:K07976 ProtClustDB:CLSZ2430646 EMBL:M34456 PIR:B34716
RefSeq:XP_643115.1 ProteinModelPortal:P20791 SMR:P20791
PRIDE:P20791 EnsemblProtists:DDB0185216 GeneID:8620520
KEGG:ddi:DDB_G0276399 OMA:KCDINDK Uniprot:P20791
Length = 203
Score = 350 (128.3 bits), Expect = 4.1e-31, P = 4.1e-31
Identities = 62/116 (53%), Positives = 91/116 (78%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y FL K++L+G++GVGK+CL+ RF+ G F P ATIG+DF I+T+E+ +RIKLQIWDT
Sbjct: 12 YDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDT 71
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYD++ + +F + +W+R IE++AS V ++L+G
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIG 127
>ZFIN|ZDB-GENE-040625-133 [details] [associations]
symbol:rab1bb "RAB1B, member RAS oncogene family b"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040625-133 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 OrthoDB:EOG48D0WM EMBL:CR450793
EMBL:BC097013 IPI:IPI00492873 RefSeq:NP_001002129.2
UniGene:Dr.79474 SMR:Q4V984 STRING:Q4V984
Ensembl:ENSDART00000078980 GeneID:415219 KEGG:dre:415219 CTD:415219
InParanoid:Q4V984 OMA:MAMATEI NextBio:20818886 Uniprot:Q4V984
Length = 201
Score = 350 (128.3 bits), Expect = 4.1e-31, P = 4.1e-31
Identities = 70/158 (44%), Positives = 110/158 (69%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+C++ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCILLRFADDTYTESFISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ Q +++ + WL+EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLKEIDRYASENVNKLLVGNKC 123
Query: 123 GL--KIVNEMASAAGLLCTVD-PALATALASDKTDLDE 157
L K V + +A ++ P L T+ A + T++++
Sbjct: 124 DLTTKKVVDYTTAKEFADSLGIPFLETS-AKNATNVEQ 160
>MGI|MGI:1914545 [details] [associations]
symbol:Rab3c "RAB3C, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IDA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017157
"regulation of exocytosis" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 MGI:MGI:1914545 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005829 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 HOGENOM:HOG000233968 OrthoDB:EOG4TB4C6 CTD:115827
KO:K07883 OMA:QMASSQD EMBL:AJ310532 EMBL:AF312037 EMBL:AY026947
EMBL:AK014132 IPI:IPI00316495 RefSeq:NP_076341.1 UniGene:Mm.151600
ProteinModelPortal:P62823 SMR:P62823 IntAct:P62823 STRING:P62823
PhosphoSite:P62823 PaxDb:P62823 PRIDE:P62823
Ensembl:ENSMUST00000167824 GeneID:67295 KEGG:mmu:67295
InParanoid:P62823 ChiTaRS:RAB3C NextBio:324148 Bgee:P62823
CleanEx:MM_RAB3C Genevestigator:P62823
GermOnline:ENSMUSG00000021700 Uniprot:P62823
Length = 227
Score = 286 (105.7 bits), Expect = 4.1e-31, Sum P(2) = 4.1e-31
Identities = 52/119 (43%), Positives = 84/119 (70%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F +T+G+DF +KTV N +RIKLQIW
Sbjct: 25 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIW 84
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGG 120
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW +I+ Y S+ +V++ G
Sbjct: 85 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTY-SWDNAQVILAG 142
Score = 90 (36.7 bits), Expect = 4.1e-31, Sum P(2) = 4.1e-31
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 199 MARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
+A NK D ED R + TE G+ ++ + ETSAK + NV++ F ++ + +K++E L
Sbjct: 140 LAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 199
>RGD|620923 [details] [associations]
symbol:Rab3c "RAB3C, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007269 "neurotransmitter
secretion" evidence=TAS] [GO:0008021 "synaptic vesicle"
evidence=IEA;ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=TAS] [GO:0017156
"calcium ion-dependent exocytosis" evidence=TAS] [GO:0017157
"regulation of exocytosis" evidence=IEA;ISO] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:620923 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005829 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 GO:GO:0017156 PROSITE:PS51419 GO:GO:0007269
eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0017157
HOGENOM:HOG000233968 GeneTree:ENSGT00690000101942 OrthoDB:EOG4TB4C6
CTD:115827 KO:K07883 OMA:QMASSQD EMBL:D78197 EMBL:U54807
EMBL:U37099 IPI:IPI00209150 PIR:JC5066 RefSeq:NP_598220.1
UniGene:Rn.11037 ProteinModelPortal:P62824 SMR:P62824 STRING:P62824
PhosphoSite:P62824 PRIDE:P62824 Ensembl:ENSRNOT00000015871
GeneID:171058 KEGG:rno:171058 InParanoid:P62824 NextBio:621629
Genevestigator:P62824 GermOnline:ENSRNOG00000011623 Uniprot:P62824
Length = 227
Score = 286 (105.7 bits), Expect = 4.1e-31, Sum P(2) = 4.1e-31
Identities = 52/119 (43%), Positives = 84/119 (70%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F +T+G+DF +KTV N +RIKLQIW
Sbjct: 25 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIW 84
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGG 120
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW +I+ Y S+ +V++ G
Sbjct: 85 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTY-SWDNAQVILAG 142
Score = 90 (36.7 bits), Expect = 4.1e-31, Sum P(2) = 4.1e-31
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 199 MARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
+A NK D ED R + TE G+ ++ + ETSAK + NV++ F ++ + +K++E L
Sbjct: 140 LAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 199
>UNIPROTKB|F1PWY4 [details] [associations]
symbol:RAB3B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030141 "secretory granule" evidence=IEA]
[GO:0018125 "peptidyl-cysteine methylation" evidence=IEA]
[GO:0017157 "regulation of exocytosis" evidence=IEA] [GO:0008021
"synaptic vesicle" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 GO:GO:0030141 GO:GO:0017157 GO:GO:0018125
GeneTree:ENSGT00690000101942 OMA:WFDFFEA EMBL:AAEX03009711
EMBL:AAEX03009710 Ensembl:ENSCAFT00000039721 Uniprot:F1PWY4
Length = 243
Score = 294 (108.6 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 51/118 (43%), Positives = 83/118 (70%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F P +T+G+DF +KTV + +R+KLQIW
Sbjct: 41 QNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIW 100
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW +I+ Y+ +LVG
Sbjct: 101 DTAGQERYRTITTAYYRGAMGFILMYDITNEDSFNAVQDWATQIKTYSWDNAQVILVG 158
Score = 81 (33.6 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 22/72 (30%), Positives = 38/72 (52%)
Query: 202 NKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL-TI 259
NK D E+R +PTE G A++ + E SAK + +V + F ++ + +K+++ L T
Sbjct: 159 NKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSLDTD 218
Query: 260 MHDRGVGMLTRI 271
G TR+
Sbjct: 219 PSTLGTSKNTRL 230
>ZFIN|ZDB-GENE-040718-428 [details] [associations]
symbol:rab3db "RAB3D, member RAS oncogene family,
b" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040718-428
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101942 OrthoDB:EOG4TB4C6 EMBL:CU571395
EMBL:BC075784 IPI:IPI00496059 RefSeq:NP_001002679.1
UniGene:Dr.86400 SMR:Q6DI07 Ensembl:ENSDART00000064031
GeneID:436952 KEGG:dre:436952 CTD:436952 InParanoid:Q6DI07
OMA:GHSACAC NextBio:20831379 Uniprot:Q6DI07
Length = 220
Score = 290 (107.1 bits), Expect = 5.0e-31, Sum P(2) = 5.0e-31
Identities = 52/124 (41%), Positives = 85/124 (68%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F +T+G+DF +KTV NN+RIKLQIW
Sbjct: 19 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNNKRIKLQIW 78
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQER+R+IT +YYR A +L++DI+ + +F+ + DW +I+ Y+ +LVG
Sbjct: 79 DTAGQERYRTITTAYYRGAMGFLLMFDITNRDSFNAVRDWATQIKTYSWDNAQVILVGNK 138
Query: 122 SGLK 125
L+
Sbjct: 139 CDLE 142
Score = 85 (35.0 bits), Expect = 5.0e-31, Sum P(2) = 5.0e-31
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D ED R IPTE + A + E SAK S NV+++F + + +K+ E L
Sbjct: 137 NKCDLEDERLIPTEDSQRLAHELGFQFFEASAKDSINVKQVFECLVDVICDKMTESL 193
>FB|FBgn0262518 [details] [associations]
symbol:Rab8 "Rab8" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS;NAS] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AE014296 GO:GO:0015031
GO:GO:0003924 eggNOG:COG1100 KO:K07976 HSSP:P07560
GeneTree:ENSGT00700000104031 OMA:SNVEQHA EMBL:AY069671 EMBL:D84347
EMBL:AB112933 RefSeq:NP_001246837.1 RefSeq:NP_524172.1
UniGene:Dm.2015 SMR:O18338 MINT:MINT-864123 STRING:O18338
EnsemblMetazoa:FBtr0074921 EnsemblMetazoa:FBtr0308833 GeneID:40168
KEGG:dme:Dmel_CG8287 UCSC:CG8287-RA CTD:40168 FlyBase:FBgn0262518
InParanoid:O18338 OrthoDB:EOG4HT788 GenomeRNAi:40168 NextBio:817374
Uniprot:O18338
Length = 207
Score = 349 (127.9 bits), Expect = 5.2e-31, P = 5.2e-31
Identities = 67/159 (42%), Positives = 108/159 (67%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++N++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +F+ + +W+R IEE AS V ++L+G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCE 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVL 162
L +++ G ++ + S K ++ +E L
Sbjct: 125 LTDKRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFL 163
>UNIPROTKB|I3L6D2 [details] [associations]
symbol:RAB1A "Ras-related protein Rab-1A" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104049 EMBL:CU928819
Ensembl:ENSSSCT00000031971 Uniprot:I3L6D2
Length = 201
Score = 349 (127.9 bits), Expect = 5.2e-31, P = 5.2e-31
Identities = 72/161 (44%), Positives = 110/161 (68%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAG 65
+LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWDTAG
Sbjct: 6 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAG 65
Query: 66 QERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSGL- 124
QERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG L
Sbjct: 66 QERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLT 125
Query: 125 -KIVNEMASAAGLLCTVD-PALATALASDKTDLDEDEHVLA 163
K V + +A ++ P L T+ A + T++++ +A
Sbjct: 126 TKKVVDYTTAKEFADSLGIPFLETS-AKNATNVEQSFMTMA 165
>UNIPROTKB|F1M225 [details] [associations]
symbol:Rab1 "Protein Rab1" species:10116 "Rattus
norvegicus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:619736 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 IPI:IPI00951369
Ensembl:ENSRNOT00000020209 ArrayExpress:F1M225 Uniprot:F1M225
Length = 205
Score = 349 (127.9 bits), Expect = 5.2e-31, P = 5.2e-31
Identities = 72/161 (44%), Positives = 110/161 (68%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAG 65
+LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWDTAG
Sbjct: 10 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAG 69
Query: 66 QERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSGL- 124
QERFR+IT SYYR AH +I+VYD++ Q +F+ + WL+EI+ YAS V ++LVG L
Sbjct: 70 QERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLT 129
Query: 125 -KIVNEMASAAGLLCTVD-PALATALASDKTDLDEDEHVLA 163
K V + +A ++ P L T+ A + T++++ +A
Sbjct: 130 TKKVVDYTTAKEFADSLGIPFLETS-AKNATNVEQSFMTMA 169
>TAIR|locus:2205603 [details] [associations]
symbol:RA-5 "RAS 5" species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IMP;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0000139 "Golgi membrane"
evidence=IDA] [GO:0032588 "trans-Golgi network membrane"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0046686
GO:GO:0007264 GO:GO:0000139 GO:GO:0032588 GO:GO:0015031
PROSITE:PS51419 GO:GO:0006888 eggNOG:COG1100 EMBL:U89959 KO:K07976
HOGENOM:HOG000233968 EMBL:AY052333 EMBL:AY061905 EMBL:D01027
IPI:IPI00547166 PIR:B86153 PIR:PS0279 RefSeq:NP_171715.1
UniGene:At.21490 ProteinModelPortal:P28188 SMR:P28188 STRING:P28188
PaxDb:P28188 PRIDE:P28188 EnsemblPlants:AT1G02130.1 GeneID:837023
KEGG:ath:AT1G02130 TAIR:At1g02130 InParanoid:P28188 OMA:VESYIST
PhylomeDB:P28188 ProtClustDB:CLSN2914624 Genevestigator:P28188
Uniprot:P28188
Length = 203
Score = 349 (127.9 bits), Expect = 5.2e-31, P = 5.2e-31
Identities = 74/159 (46%), Positives = 108/159 (67%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF+ + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ + +F+ + WL EI+ YAS V ++LVG S
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKS 123
Query: 123 GLK----IVNEMASAAGLLCTVDPALATALASDKTDLDE 157
L I E A A + P + T+ A D T++++
Sbjct: 124 DLTENRAIPYETAKAFADEIGI-PFMETS-AKDATNVEQ 160
>TAIR|locus:2084056 [details] [associations]
symbol:RAB8 "RAB GTPase homolog 8" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0007264 GO:GO:0000139 GO:GO:0015031
EMBL:AL132966 PROSITE:PS51419 eggNOG:COG1100 UniGene:At.10020
HOGENOM:HOG000233968 HSSP:P07560 KO:K07901 OMA:SNVEQHA EMBL:U82434
EMBL:BT004779 EMBL:AK228083 EMBL:AK230120 EMBL:AY086756
IPI:IPI00517955 PIR:T45901 RefSeq:NP_001078278.1 RefSeq:NP_190929.1
RefSeq:NP_850696.1 ProteinModelPortal:O24466 SMR:O24466
IntAct:O24466 STRING:O24466 PaxDb:O24466 PRIDE:O24466
EnsemblPlants:AT3G53610.1 EnsemblPlants:AT3G53610.2
EnsemblPlants:AT3G53610.3 GeneID:824529 KEGG:ath:AT3G53610
TAIR:At3g53610 InParanoid:O24466 PhylomeDB:O24466
ProtClustDB:CLSN2684931 Genevestigator:O24466 Uniprot:O24466
Length = 216
Score = 349 (127.9 bits), Expect = 5.2e-31, P = 5.2e-31
Identities = 67/158 (42%), Positives = 108/158 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG +
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKA 130
Query: 123 GL-KIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ + + + G + + S KT+L+ +E
Sbjct: 131 DMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEE 168
>TAIR|locus:2168103 [details] [associations]
symbol:AT5G59840 species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0009506
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031
EMBL:AB015475 eggNOG:COG1100 HOGENOM:HOG000233968 HSSP:P07560
KO:K07901 OMA:KCDINDK ProtClustDB:CLSN2684795 UniGene:At.29202
UniGene:At.29203 EMBL:BT004152 EMBL:BT005628 IPI:IPI00519307
RefSeq:NP_200792.1 ProteinModelPortal:Q9FJF1 SMR:Q9FJF1
STRING:Q9FJF1 PaxDb:Q9FJF1 PRIDE:Q9FJF1 EnsemblPlants:AT5G59840.1
GeneID:836105 KEGG:ath:AT5G59840 TAIR:At5g59840 InParanoid:Q9FJF1
PhylomeDB:Q9FJF1 ArrayExpress:Q9FJF1 Genevestigator:Q9FJF1
Uniprot:Q9FJF1
Length = 216
Score = 349 (127.9 bits), Expect = 5.2e-31, P = 5.2e-31
Identities = 67/158 (42%), Positives = 108/158 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W+R IE++AS V ++LVG +
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 123 GL-KIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ + + + G + + S KT+L+ +E
Sbjct: 131 DMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEE 168
>TAIR|locus:2831859 [details] [associations]
symbol:RABC2A "RAB GTPase homolog C2A" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005777 "peroxisome" evidence=IDA] [GO:0030742 "GTP-dependent
protein binding" evidence=IPI] [GO:0080115 "myosin XI tail binding"
evidence=IPI] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 EMBL:AL162751 GO:GO:0005777
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 InterPro:IPR025662
PROSITE:PS00675 KO:K07976 HOGENOM:HOG000233968 HSSP:P07560
OMA:FAKRHRT EMBL:D89824 EMBL:AK119027 EMBL:BT006101 IPI:IPI00545141
PIR:T48379 RefSeq:NP_568121.1 UniGene:At.346
ProteinModelPortal:O49841 SMR:O49841 IntAct:O49841 STRING:O49841
PaxDb:O49841 PRIDE:O49841 EnsemblPlants:AT5G03530.1 GeneID:831810
KEGG:ath:AT5G03530 TAIR:At5g03530 InParanoid:O49841
PhylomeDB:O49841 ProtClustDB:PLN03118 Genevestigator:O49841
Uniprot:O49841
Length = 210
Score = 272 (100.8 bits), Expect = 5.8e-31, Sum P(2) = 5.8e-31
Identities = 57/118 (48%), Positives = 80/118 (67%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y FK++L+G++GVGK+ L+ F TIGVDF IK + + +R+KL IWDT
Sbjct: 10 YDLSFKILLIGDSGVGKSSLLVSFISSSVED-LAPTIGVDFKIKQLTVGGKRLKLTIWDT 68
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTD-WLREIEEYASFK-VLRVLVG 119
AGQERFR++T SYYR A +ILVYD++ + TF L D W +EIE Y++ + +R+LVG
Sbjct: 69 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRMLVG 126
Score = 103 (41.3 bits), Expect = 5.8e-31, Sum P(2) = 5.8e-31
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 189 LEGHSNNIHC---MARNKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQ 244
+E +S N C + NK+DRE +R + E G AK + +LE SA+ NVE+ F +
Sbjct: 111 IELYSTNQECVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEE 170
Query: 245 IAAELME 251
+A ++ME
Sbjct: 171 LALKIME 177
Score = 39 (18.8 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 7/34 (20%), Positives = 18/34 (52%)
Query: 291 KSLESCIKQIVKKFPNIDIKSVSGISQIRSDIVK 324
+++E C +++ K + G S ++ +I+K
Sbjct: 162 QNVEQCFEELALKIMEVPSLLEEGSSAVKRNILK 195
>RGD|620922 [details] [associations]
symbol:Rab3b "RAB3B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=NAS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008021 "synaptic vesicle"
evidence=IEA;ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0017157 "regulation of exocytosis" evidence=ISO;TAS]
[GO:0018125 "peptidyl-cysteine methylation" evidence=IEA;ISO]
[GO:0030141 "secretory granule" evidence=IEA;ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:620922 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0008021 GO:GO:0030141 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0017157 GO:GO:0018125
OrthoDB:EOG4TB4C6 CTD:5865 KO:K06108 EMBL:Y14019 EMBL:S68807
IPI:IPI00470247 PIR:I53485 RefSeq:NP_112353.1 UniGene:Rn.3788
UniGene:Rn.9822 ProteinModelPortal:Q63941 SMR:Q63941 STRING:Q63941
PRIDE:Q63941 GeneID:81755 KEGG:rno:81755 InParanoid:Q63941
NextBio:615522 ArrayExpress:Q63941 Genevestigator:Q63941
GermOnline:ENSRNOG00000008001 Uniprot:Q63941
Length = 219
Score = 294 (108.6 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
Identities = 51/118 (43%), Positives = 83/118 (70%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F P +T+G+DF +KTV + +R+KLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIW 76
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW +I+ Y+ +LVG
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVG 134
Score = 80 (33.2 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
Identities = 22/72 (30%), Positives = 38/72 (52%)
Query: 202 NKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL-TI 259
NK D E+R IPTE G A++ + E SAK + +V + F ++ + +K+++ + T
Sbjct: 135 NKCDMEEERVIPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSMDTD 194
Query: 260 MHDRGVGMLTRI 271
G TR+
Sbjct: 195 PSVLGASKTTRL 206
>UNIPROTKB|F1S6G3 [details] [associations]
symbol:RAB3B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015031 "protein transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00690000101942 KO:K06108 EMBL:CU468046
RefSeq:XP_003128025.1 Ensembl:ENSSSCT00000026725 GeneID:100514585
KEGG:ssc:100514585 Uniprot:F1S6G3
Length = 219
Score = 293 (108.2 bits), Expect = 6.2e-31, Sum P(2) = 6.2e-31
Identities = 51/118 (43%), Positives = 82/118 (69%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F P +T+G+DF +KTV +R+KLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRQEKRVKLQIW 76
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW +I+ Y+ +LVG
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVG 134
Score = 81 (33.6 bits), Expect = 6.2e-31, Sum P(2) = 6.2e-31
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 202 NKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D E+R +PTE G+ A++ + E SAK + +V + F ++ + +K+++ L
Sbjct: 135 NKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDTL 191
>WB|WBGene00004272 [details] [associations]
symbol:rab-8 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA;ISS] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040039 "inductive cell migration" evidence=IMP]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0009306 "protein secretion" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0030538 "embryonic genitalia
morphogenesis" evidence=IMP] [GO:0010008 "endosome membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0009792 GO:GO:0006915 GO:GO:0007264 GO:GO:0003924
GO:GO:0071688 GO:GO:0048477 GO:GO:0009306 GO:GO:0010008
GO:GO:0040039 GO:GO:0030538 HSSP:P07560
GeneTree:ENSGT00700000104031 KO:K07901 OMA:SNVEQHA EMBL:AB112929
EMBL:FO080997 RefSeq:NP_491199.2 UniGene:Cel.23073
ProteinModelPortal:G5EFC1 SMR:G5EFC1 EnsemblMetazoa:D1037.4
GeneID:171935 KEGG:cel:CELE_D1037.4 CTD:171935 WormBase:D1037.4
NextBio:873315 Uniprot:G5EFC1
Length = 211
Score = 348 (127.6 bits), Expect = 6.7e-31, P = 6.7e-31
Identities = 67/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF+ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A +ILVYDI+ + +F+ + +W+R IEE+A+ V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
++ E++ G ++ S K +L+ DE
Sbjct: 125 IEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDE 160
>UNIPROTKB|G5EFC1 [details] [associations]
symbol:rab-8 "Rab8" species:6239 "Caenorhabditis elegans"
[GO:0006184 "GTP catabolic process" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0009792 GO:GO:0006915
GO:GO:0007264 GO:GO:0003924 GO:GO:0071688 GO:GO:0048477
GO:GO:0009306 GO:GO:0010008 GO:GO:0040039 GO:GO:0030538 HSSP:P07560
GeneTree:ENSGT00700000104031 KO:K07901 OMA:SNVEQHA EMBL:AB112929
EMBL:FO080997 RefSeq:NP_491199.2 UniGene:Cel.23073
ProteinModelPortal:G5EFC1 SMR:G5EFC1 EnsemblMetazoa:D1037.4
GeneID:171935 KEGG:cel:CELE_D1037.4 CTD:171935 WormBase:D1037.4
NextBio:873315 Uniprot:G5EFC1
Length = 211
Score = 348 (127.6 bits), Expect = 6.7e-31, P = 6.7e-31
Identities = 67/156 (42%), Positives = 107/156 (68%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF+ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A +ILVYDI+ + +F+ + +W+R IEE+A+ V R+++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
++ E++ G ++ S K +L+ DE
Sbjct: 125 IEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDE 160
>ZFIN|ZDB-GENE-040801-2 [details] [associations]
symbol:rab3aa "RAB3A, member RAS oncogene family, a"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040801-2 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101942 KO:K07882 EMBL:CR769774 EMBL:BC075980
IPI:IPI00484138 RefSeq:NP_001003419.1 UniGene:Dr.83119 SMR:Q6DHJ2
Ensembl:ENSDART00000078838 GeneID:445024 KEGG:dre:445024 CTD:445024
InParanoid:Q6DHJ2 OMA:DIICERM OrthoDB:EOG42NJ17 NextBio:20831785
Uniprot:Q6DHJ2
Length = 220
Score = 300 (110.7 bits), Expect = 7.4e-31, Sum P(2) = 7.4e-31
Identities = 55/134 (41%), Positives = 89/134 (66%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FKV+++GN+ VGKT + R+ F P +T+G+DF +KT+ N++RIKLQIW
Sbjct: 17 QNFDYMFKVLIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIW 76
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW +I+ Y+ +LVG
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEDSFNAVQDWSTQIKTYSWDNAQVLLVGNK 136
Query: 122 SGLKIVNEMASAAG 135
++ +A G
Sbjct: 137 CDMEDERVVAGQRG 150
Score = 73 (30.8 bits), Expect = 7.4e-31, Sum P(2) = 7.4e-31
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D ED R + + G +++ + E SAK + NV++ F ++ + E+++E L
Sbjct: 135 NKCDMEDERVVAGQRGRQLSEQLGFEFFEASAKDNINVKQTFERLVDVICERMSENL 191
Score = 39 (18.8 bits), Expect = 2.7e-27, Sum P(2) = 2.7e-27
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 488 ASVRAYMNVLQTVENYVHIDMTRVFNN 514
AS + +NV QT E V + R+ N
Sbjct: 164 ASAKDNINVKQTFERLVDVICERMSEN 190
>UNIPROTKB|P10948 [details] [associations]
symbol:RAB3B "Ras-related protein Rab-3B" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0030141
"secretory granule" evidence=IEA] [GO:0018125 "peptidyl-cysteine
methylation" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0008021 GO:GO:0030141 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0017157 GO:GO:0018125
HOGENOM:HOG000233968 GeneTree:ENSGT00690000101942 OrthoDB:EOG4TB4C6
EMBL:M19886 EMBL:BC122723 IPI:IPI00713862 PIR:B29224
RefSeq:NP_776872.1 UniGene:Bt.388 ProteinModelPortal:P10948
SMR:P10948 PRIDE:P10948 Ensembl:ENSBTAT00000007019 GeneID:282030
KEGG:bta:282030 CTD:5865 InParanoid:P10948 KO:K06108 OMA:WFDFFEA
NextBio:20805893 Uniprot:P10948
Length = 219
Score = 294 (108.6 bits), Expect = 7.8e-31, Sum P(2) = 7.8e-31
Identities = 51/118 (43%), Positives = 83/118 (70%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F P +T+G+DF +KTV + +R+KLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIW 76
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW +I+ Y+ +LVG
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVG 134
Score = 79 (32.9 bits), Expect = 7.8e-31, Sum P(2) = 7.8e-31
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 202 NKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D E+R +PTE G A++ + E SAK + +V + F ++ + +K+++ L
Sbjct: 135 NKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDTL 191
>MGI|MGI:1917158 [details] [associations]
symbol:Rab3b "RAB3B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IDA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017157
"regulation of exocytosis" evidence=IDA] [GO:0018125
"peptidyl-cysteine methylation" evidence=IDA] [GO:0030141
"secretory granule" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 MGI:MGI:1917158 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005829 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 GO:GO:0018125 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101942 CTD:5865 KO:K06108 EMBL:AF312036
EMBL:AF307514 EMBL:AK012165 EMBL:AK082959 EMBL:BC051918
EMBL:BC057173 IPI:IPI00113112 RefSeq:NP_076026.1 UniGene:Mm.41580
ProteinModelPortal:Q9CZT8 SMR:Q9CZT8 IntAct:Q9CZT8
MINT:MINT-1341069 STRING:Q9CZT8 PhosphoSite:Q9CZT8 PaxDb:Q9CZT8
PRIDE:Q9CZT8 Ensembl:ENSMUST00000003502 Ensembl:ENSMUST00000106650
GeneID:69908 KEGG:mmu:69908 NextBio:330587 Bgee:Q9CZT8
CleanEx:MM_RAB3B Genevestigator:Q9CZT8
GermOnline:ENSMUSG00000003411 Uniprot:Q9CZT8
Length = 219
Score = 294 (108.6 bits), Expect = 7.8e-31, Sum P(2) = 7.8e-31
Identities = 51/118 (43%), Positives = 83/118 (70%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F P +T+G+DF +KTV + +R+KLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIW 76
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW +I+ Y+ +LVG
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVG 134
Score = 79 (32.9 bits), Expect = 7.8e-31, Sum P(2) = 7.8e-31
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 202 NKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL-TI 259
NK D E+R +PTE G A++ + E SAK + +V + F ++ + +K+++ + T
Sbjct: 135 NKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSMDTD 194
Query: 260 MHDRGVGMLTRI 271
G TR+
Sbjct: 195 PSVLGASKTTRL 206
>WB|WBGene00004285 [details] [associations]
symbol:rab-37 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
KO:K07976 GeneTree:ENSGT00700000104031 EMBL:FO081187
UniGene:Cel.23034 GeneID:180696 KEGG:cel:CELE_W01H2.3 CTD:180696
NextBio:910498 RefSeq:NP_001041294.1 ProteinModelPortal:G5EFA6
SMR:G5EFA6 EnsemblMetazoa:W01H2.3b WormBase:W01H2.3b OMA:KLKYGFV
Uniprot:G5EFA6
Length = 223
Score = 286 (105.7 bits), Expect = 8.4e-31, Sum P(2) = 8.4e-31
Identities = 56/118 (47%), Positives = 81/118 (68%)
Query: 8 FKVVLVGNAGVGKTCLVRRFTQGVFPPGQG-ATIGVDFMIKTVEINNERIKLQIWDTAGQ 66
FKV+L+G++ GKTCL+ R+ G F +T+G+D+ K + + ++++KLQIWDTAGQ
Sbjct: 30 FKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQ 89
Query: 67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSGL 124
ERFRS+T SYYR A AL+LVYDI+ + +F+ +WL +I+EY V LVG L
Sbjct: 90 ERFRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDL 147
Score = 87 (35.7 bits), Expect = 8.4e-31, Sum P(2) = 8.4e-31
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 202 NKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKL 253
NK D R +PT+ G+ A+ + + ++ETSAK NV++ F+ +A E M KL
Sbjct: 143 NKCDLP-RAVPTDEGKRLAEAYQIPFMETSAKTGFNVDRAFLGLA-ERMLKL 192
>UNIPROTKB|A4FV54 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9913 "Bos
taurus" [GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0019003
"GDP binding" evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS]
[GO:0017137 "Rab GTPase binding" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0055037 "recycling
endosome" evidence=IEA] [GO:0048210 "Golgi vesicle fusion to target
membrane" evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0031513 "nonmotile primary cilium" evidence=IEA] [GO:0006904
"vesicle docking involved in exocytosis" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0048471 GO:GO:0007264 GO:GO:0015031 GO:GO:0055037
GO:GO:0007409 PROSITE:PS51419 GO:GO:0005932 GO:GO:0042384
GO:GO:0017137 eggNOG:COG1100 GO:GO:0019003 GO:GO:0031513
GO:GO:0006904 HOVERGEN:HBG009351 GO:GO:0048210 HOGENOM:HOG000233968
OrthoDB:EOG4K3KX6 GeneTree:ENSGT00700000104031 EMBL:BC123755
IPI:IPI00718035 RefSeq:NP_001098951.1 UniGene:Bt.9871
ProteinModelPortal:A4FV54 SMR:A4FV54 STRING:A4FV54 PRIDE:A4FV54
Ensembl:ENSBTAT00000021408 GeneID:100125881 KEGG:bta:100125881
CTD:4218 InParanoid:A4FV54 KO:K07901 OMA:CDANDKR NextBio:20788864
Uniprot:A4FV54
Length = 207
Score = 347 (127.2 bits), Expect = 8.6e-31, P = 8.6e-31
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD 156
+ +++ G +D + S K +++
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANIN 157
>UNIPROTKB|J9NWR1 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9615
"Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104031 EMBL:AAEX03012309
Ensembl:ENSCAFT00000044078 Uniprot:J9NWR1
Length = 228
Score = 347 (127.2 bits), Expect = 8.6e-31, P = 8.6e-31
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD 156
+ +++ G +D + S K +++
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANIN 157
>UNIPROTKB|P61007 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9615
"Canis lupus familiaris" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS] [GO:0005525
"GTP binding" evidence=ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISS] [GO:0007409 "axonogenesis" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0048471 GO:GO:0007264 GO:GO:0015031 GO:GO:0042995
GO:GO:0007409 PROSITE:PS51419 GO:GO:0017137 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 HOGENOM:HOG000233968
OrthoDB:EOG4K3KX6 GeneTree:ENSGT00700000104031 CTD:4218 KO:K07901
EMBL:X56385 PIR:B36364 RefSeq:NP_001003152.1 UniGene:Cfa.3637
ProteinModelPortal:P61007 SMR:P61007 MINT:MINT-155827 STRING:P61007
PRIDE:P61007 Ensembl:ENSCAFT00000025007 GeneID:403773
KEGG:cfa:403773 InParanoid:P61007 OMA:SNVEQHA NextBio:20817272
Uniprot:P61007
Length = 207
Score = 347 (127.2 bits), Expect = 8.6e-31, P = 8.6e-31
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD 156
+ +++ G +D + S K +++
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANIN 157
>UNIPROTKB|B4DEK7 [details] [associations]
symbol:RAB8A "cDNA FLJ53028, highly similar to Ras-related
protein Rab-8A" species:9606 "Homo sapiens" [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 EMBL:AC008894 UniGene:Hs.642874 HGNC:HGNC:7007
EMBL:AK293676 IPI:IPI00909683 ProteinModelPortal:B4DEK7
STRING:B4DEK7 PRIDE:B4DEK7 Ensembl:ENST00000586682 UCSC:uc010xpc.2
Bgee:B4DEK7 Uniprot:B4DEK7
Length = 207
Score = 347 (127.2 bits), Expect = 8.6e-31, P = 8.6e-31
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD 156
+ +++ G +D + S K +++
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANIN 157
>UNIPROTKB|P61006 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0043025 "neuronal cell
body" evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0051223 "regulation of
protein transport" evidence=IEA] [GO:0055037 "recycling endosome"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0030670 "phagocytic
vesicle membrane" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007409 "axonogenesis" evidence=ISS] [GO:0017137
"Rab GTPase binding" evidence=ISS] [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0005525 "GTP binding" evidence=IDA] [GO:0019003
"GDP binding" evidence=IDA] [GO:0006904 "vesicle docking involved
in exocytosis" evidence=IDA] [GO:0031513 "nonmotile primary cilium"
evidence=IDA] [GO:0042384 "cilium assembly" evidence=IDA]
[GO:0048210 "Golgi vesicle fusion to target membrane" evidence=IDA]
Reactome:REACT_11123 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0048471 GO:GO:0007264 GO:GO:0015031 GO:GO:0055037
GO:GO:0007409 PROSITE:PS51419 GO:GO:0005932 GO:GO:0042384
EMBL:CH471106 GO:GO:0017137 eggNOG:COG1100 GO:GO:0019003
GO:GO:0031513 GO:GO:0006904 HOVERGEN:HBG009351 GO:GO:0048210
PDB:3QBT PDBsum:3QBT HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6
CTD:4218 KO:K07901 OMA:SNVEQHA EMBL:X56741 EMBL:S53268
EMBL:AF498943 EMBL:BT007184 EMBL:CR536583 EMBL:CR542274
EMBL:BC002977 IPI:IPI00028481 PIR:B49647 RefSeq:NP_005361.2
UniGene:Hs.642874 PDB:3TNF PDBsum:3TNF ProteinModelPortal:P61006
SMR:P61006 DIP:DIP-43703N IntAct:P61006 MINT:MINT-1416277
STRING:P61006 PhosphoSite:P61006 DMDM:46810392 PaxDb:P61006
PeptideAtlas:P61006 PRIDE:P61006 DNASU:4218 Ensembl:ENST00000300935
GeneID:4218 KEGG:hsa:4218 UCSC:uc002ndn.4 GeneCards:GC19P016222
HGNC:HGNC:7007 MIM:165040 neXtProt:NX_P61006 PharmGKB:PA30743
InParanoid:P61006 PhylomeDB:P61006 ChiTaRS:RAB8A GenomeRNAi:4218
NextBio:16637 Bgee:P61006 CleanEx:HS_RAB8A Genevestigator:P61006
GermOnline:ENSG00000167461 Uniprot:P61006
Length = 207
Score = 347 (127.2 bits), Expect = 8.6e-31, P = 8.6e-31
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD 156
+ +++ G +D + S K +++
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANIN 157
>UNIPROTKB|F2Z5I8 [details] [associations]
symbol:RAB8A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055037 "recycling endosome" evidence=IEA] [GO:0048210
"Golgi vesicle fusion to target membrane" evidence=IEA] [GO:0042384
"cilium assembly" evidence=IEA] [GO:0031513 "nonmotile primary
cilium" evidence=IEA] [GO:0006904 "vesicle docking involved in
exocytosis" evidence=IEA] [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0055037 GO:GO:0005932 GO:GO:0042384
GO:GO:0031513 GO:GO:0006904 GO:GO:0048210
GeneTree:ENSGT00700000104031 CTD:4218 KO:K07901 OMA:SNVEQHA
EMBL:CU856246 RefSeq:NP_001230731.1 UniGene:Ssc.24907
ProteinModelPortal:F2Z5I8 SMR:F2Z5I8 PRIDE:F2Z5I8
Ensembl:ENSSSCT00000015126 GeneID:100511006 KEGG:ssc:100511006
Uniprot:F2Z5I8
Length = 207
Score = 347 (127.2 bits), Expect = 8.6e-31, P = 8.6e-31
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD 156
+ +++ G +D + S K +++
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANIN 157
>UNIPROTKB|Q4R5P1 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9541
"Macaca fascicularis" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0007409 "axonogenesis" evidence=ISS] [GO:0017137 "Rab GTPase
binding" evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS]
[GO:0045335 "phagocytic vesicle" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 GO:GO:0048471 GO:GO:0007264 GO:GO:0015031
GO:GO:0042995 GO:GO:0007409 PROSITE:PS51419 GO:GO:0017137
GO:GO:0019003 HOVERGEN:HBG009351 EMBL:AB169502
ProteinModelPortal:Q4R5P1 SMR:Q4R5P1 PRIDE:Q4R5P1 Uniprot:Q4R5P1
Length = 207
Score = 347 (127.2 bits), Expect = 8.6e-31, P = 8.6e-31
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD 156
+ +++ G +D + S K +++
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANIN 157
>UNIPROTKB|Q5R4A3 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9601
"Pongo abelii" [GO:0005525 "GTP binding" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS] [GO:0045335
"phagocytic vesicle" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 GO:GO:0048471 GO:GO:0007264 GO:GO:0015031
GO:GO:0042995 GO:GO:0007409 PROSITE:PS51419 GO:GO:0017137
GO:GO:0019003 HOVERGEN:HBG009351 HSSP:P55258 CTD:4218 KO:K07901
EMBL:CR861352 RefSeq:NP_001127003.1 UniGene:Pab.18475
ProteinModelPortal:Q5R4A3 SMR:Q5R4A3 PRIDE:Q5R4A3 GeneID:100174026
KEGG:pon:100174026 InParanoid:Q5R4A3 Uniprot:Q5R4A3
Length = 207
Score = 347 (127.2 bits), Expect = 8.6e-31, P = 8.6e-31
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKRD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD 156
+ +++ G +D + S K +++
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANIN 157
>MGI|MGI:96960 [details] [associations]
symbol:Rab8a "RAB8A, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006904
"vesicle docking involved in exocytosis" evidence=ISO] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0014069 "postsynaptic
density" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=ISO] [GO:0019003
"GDP binding" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031513
"nonmotile primary cilium" evidence=ISO;IDA] [GO:0032880
"regulation of protein localization" evidence=ISO] [GO:0042384
"cilium assembly" evidence=ISO] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0045335 "phagocytic vesicle" evidence=ISO] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=ISO] [GO:0048210 "Golgi vesicle fusion to target membrane"
evidence=ISO] [GO:0051223 "regulation of protein transport"
evidence=ISO] [GO:0055037 "recycling endosome" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:96960
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0048471 Reactome:REACT_147847 GO:GO:0007264 GO:GO:0015031
GO:GO:0055037 GO:GO:0007409 PROSITE:PS51419 GO:GO:0005932
GO:GO:0042384 GO:GO:0017137 eggNOG:COG1100 GO:GO:0019003
GO:GO:0031513 GO:GO:0006904 HOVERGEN:HBG009351 PDB:2FU5 PDBsum:2FU5
GO:GO:0048210 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 CTD:4218
KO:K07901 OMA:SNVEQHA EMBL:S53270 EMBL:AK076048 EMBL:AK079306
EMBL:AK080740 EMBL:BC019990 IPI:IPI00331128 RefSeq:NP_075615.2
UniGene:Mm.162811 ProteinModelPortal:P55258 SMR:P55258
IntAct:P55258 STRING:P55258 PhosphoSite:P55258 PaxDb:P55258
PRIDE:P55258 Ensembl:ENSMUST00000003121 GeneID:17274 KEGG:mmu:17274
EvolutionaryTrace:P55258 NextBio:291770 Bgee:P55258
CleanEx:MM_RAB8A Genevestigator:P55258
GermOnline:ENSMUSG00000003037 Uniprot:P55258
Length = 207
Score = 347 (127.2 bits), Expect = 8.6e-31, P = 8.6e-31
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD 156
+ +++ G +D + S K +++
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANIN 157
>RGD|621144 [details] [associations]
symbol:Rab8a "RAB8A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=ISO;ISS]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0006904 "vesicle docking involved in
exocytosis" evidence=IEA;ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IMP] [GO:0014069 "postsynaptic density" evidence=IDA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=IDA] [GO:0019003
"GDP binding" evidence=ISO;ISS] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0031513
"nonmotile primary cilium" evidence=IEA;ISO] [GO:0032880
"regulation of protein localization" evidence=IMP] [GO:0042384
"cilium assembly" evidence=IEA;ISO] [GO:0043025 "neuronal cell
body" evidence=IDA] [GO:0045335 "phagocytic vesicle"
evidence=ISO;ISS] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IDA;IMP] [GO:0048210 "Golgi vesicle
fusion to target membrane" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0051223
"regulation of protein transport" evidence=IDA;IMP] [GO:0055037
"recycling endosome" evidence=IEA;ISO] Reactome:REACT_97881
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:621144 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794 GO:GO:0048471
GO:GO:0007264 GO:GO:0014069 GO:GO:0015031 GO:GO:0043025
GO:GO:0016023 GO:GO:0007409 PROSITE:PS51419 GO:GO:0048169
GO:GO:0051223 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 GeneTree:ENSGT00700000104031
CTD:4218 KO:K07901 EMBL:BC071176 EMBL:BC105863 EMBL:M83675
IPI:IPI00196789 PIR:A42148 RefSeq:NP_446450.2 UniGene:Rn.16064
ProteinModelPortal:P35280 SMR:P35280 STRING:P35280
PhosphoSite:P35280 PRIDE:P35280 Ensembl:ENSRNOT00000020748
GeneID:117103 KEGG:rno:117103 UCSC:RGD:621144 NextBio:619992
ArrayExpress:P35280 Genevestigator:P35280
GermOnline:ENSRNOG00000014621 Uniprot:P35280
Length = 207
Score = 347 (127.2 bits), Expect = 8.6e-31, P = 8.6e-31
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLD 156
+ +++ G +D + S K +++
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANIN 157
>UNIPROTKB|Q06AU7 [details] [associations]
symbol:RAB1B "Ras-related protein Rab-1B" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=ISS] [GO:0016020
"membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0007264 GO:GO:0016020
GO:GO:0015031 PROSITE:PS51419 HOVERGEN:HBG009351 CTD:81876
KO:K07875 EMBL:DQ917628 RefSeq:NP_001116645.1 UniGene:Ssc.78746
ProteinModelPortal:Q06AU7 SMR:Q06AU7 GeneID:100144502
KEGG:ssc:100144502 Uniprot:Q06AU7
Length = 201
Score = 346 (126.9 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 73/163 (44%), Positives = 111/163 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQER R+IT SYYR AH +I+VYD++ Q ++ + WL+EI+ YAS V ++LVG S
Sbjct: 64 TAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 123
Query: 123 GL---KIVN-----EMASAAGLLCTVDPALATALASDKTDLDE 157
L K+V+ E A + G+ P L T+ A + T++++
Sbjct: 124 DLTTKKVVDNTTAKEFADSLGI-----PFLETS-AKNATNVEQ 160
>POMBASE|SPAC9E9.07c [details] [associations]
symbol:ypt2 "GTPase Ypt2" species:4896
"Schizosaccharomyces pombe" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0005525 "GTP binding" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006887
"exocytosis" evidence=IMP] [GO:0006893 "Golgi to plasma membrane
transport" evidence=ISO] [GO:0006906 "vesicle fusion" evidence=ISO]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
PomBase:SPAC9E9.07c GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0006886 GO:GO:0007264
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003924 GO:GO:0006887
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0006893 GO:GO:0006906
GO:GO:0065007 HOGENOM:HOG000233968 KO:K07901 OMA:SNVEQHA
OrthoDB:EOG4X3M9K EMBL:X52469 EMBL:X52864 PIR:S12790
RefSeq:NP_594580.1 ProteinModelPortal:P17609 SMR:P17609
STRING:P17609 PRIDE:P17609 EnsemblFungi:SPAC9E9.07c.1
GeneID:2543280 KEGG:spo:SPAC9E9.07c NextBio:20804300 Uniprot:P17609
Length = 200
Score = 346 (126.9 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 64/158 (40%), Positives = 106/158 (67%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+ Y +L K++L+G++GVGK+CL+ RF++ F P TIG+DF I+T+E++ +RIKLQIW
Sbjct: 4 KSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIW 63
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQERFR+IT +YYR A ++L+YD++ + +FD + W +E++AS V ++L+G
Sbjct: 64 DTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNK 123
Query: 122 SGLKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ +++ G + + AS KT+++ DE
Sbjct: 124 CDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDE 161
>RGD|620924 [details] [associations]
symbol:Rab3d "RAB3D, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006887 "exocytosis" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IEA;ISO] [GO:0018125 "peptidyl-cysteine methylation"
evidence=IEA;ISO] [GO:0030133 "transport vesicle" evidence=IDA]
[GO:0042588 "zymogen granule" evidence=IEA;ISO] [GO:0051020 "GTPase
binding" evidence=IPI] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:620924 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 GO:GO:0006887
PROSITE:PS51419 GO:GO:0030133 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 GO:GO:0042588 GO:GO:0018125 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101942 OrthoDB:EOG4TB4C6 UniGene:Rn.9822
CTD:9545 KO:K07884 OMA:GKGPTLG EMBL:U90206 EMBL:BC081741
EMBL:S68808 EMBL:M83681 IPI:IPI00213685 PIR:I67631
RefSeq:NP_542147.1 ProteinModelPortal:Q63942 SMR:Q63942
IntAct:Q63942 STRING:Q63942 PhosphoSite:Q63942 PRIDE:Q63942
Ensembl:ENSRNOT00000015609 GeneID:140665 KEGG:rno:140665
UCSC:RGD:620924 InParanoid:Q63942 NextBio:620635
Genevestigator:Q63942 GermOnline:ENSRNOG00000011582 Uniprot:Q63942
Length = 219
Score = 297 (109.6 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 54/124 (43%), Positives = 85/124 (68%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++L+GN+ VGKT + R+ F P +T+G+DF +KTV +++RIKLQIW
Sbjct: 17 QNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIW 76
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQER+R+IT +YYR A +L+YDI+ Q +F + DW +I+ Y+ +LVG
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNK 136
Query: 122 SGLK 125
L+
Sbjct: 137 CDLE 140
Score = 73 (30.8 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D ED R + E G+ A + E SAK + NV+++F ++ + +K+ E L
Sbjct: 135 NKCDLEDERVVSAEDGQRLAGDLGFEFFEASAKENINVKQVFERLVDIICDKMNESL 191
>ZFIN|ZDB-GENE-050208-660 [details] [associations]
symbol:rab3b "RAB3B, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-050208-660 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101942 EMBL:CR381682 IPI:IPI00482747
Ensembl:ENSDART00000062820 Uniprot:F1QCC8
Length = 218
Score = 287 (106.1 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
Identities = 50/118 (42%), Positives = 83/118 (70%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F +T+G+DF +KTV N++R+KLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFSSSFVSTVGIDFKVKTVYRNDKRVKLQIW 76
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQER+R+IT +YYR A IL+YDI+ + +++ + DW +I+ Y+ +LVG
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESYNAVQDWATQIKTYSWDNAQVILVG 134
Score = 83 (34.3 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 202 NKIDR-EDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTI 259
NK D E+R +P E G+ A + Y E SAK + NV ++F ++ + K++E++ +
Sbjct: 135 NKCDMDEERVVPFEKGKHLADQLGFEYYEASAKENINVRQVFERLVDIICVKMSERVDV 193
>TAIR|locus:2171484 [details] [associations]
symbol:RAB1A "RAB GTPase homolog 1A" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0009860 "pollen tube growth" evidence=IGI] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA] [GO:0010200
"response to chitin" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0007264
GO:GO:0000139 GO:GO:0016192 GO:GO:0015031 GO:GO:0009860
PROSITE:PS51419 eggNOG:COG1100 EMBL:AB018117 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 OMA:MIMASEI EMBL:AF324990
EMBL:AY080753 EMBL:AY114013 EMBL:BT023739 EMBL:BT025777
EMBL:AK227103 EMBL:AY085384 IPI:IPI00655443 RefSeq:NP_568678.1
UniGene:At.16977 UniGene:At.24811 UniGene:At.25480
ProteinModelPortal:Q9FPJ4 SMR:Q9FPJ4 IntAct:Q9FPJ4 STRING:Q9FPJ4
PaxDb:Q9FPJ4 PRIDE:Q9FPJ4 EnsemblPlants:AT5G47200.1 GeneID:834766
KEGG:ath:AT5G47200 TAIR:At5g47200 InParanoid:Q9FPJ4
PhylomeDB:Q9FPJ4 ProtClustDB:CLSN2685987 Genevestigator:Q9FPJ4
Uniprot:Q9FPJ4
Length = 202
Score = 343 (125.8 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 74/159 (46%), Positives = 108/159 (67%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+ YD++ +F+ + WL EI+ YAS V ++LVG +
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKN 123
Query: 123 GL---KIVN-EMASAAGLLCTVDPALATALASDKTDLDE 157
L K+V+ E A A + P L T+ A + T+++E
Sbjct: 124 DLTSQKVVSTETAKAFADELGI-PFLETS-AKNATNVEE 160
>FB|FBgn0005586 [details] [associations]
symbol:Rab3 "Rab3" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS;NAS] [GO:0015031
"protein transport" evidence=IEA;NAS] [GO:0008021 "synaptic
vesicle" evidence=IDA;NAS] [GO:0016192 "vesicle-mediated transport"
evidence=NAS] [GO:0007269 "neurotransmitter secretion"
evidence=NAS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0031982 "vesicle" evidence=ISS] [GO:0048786 "presynaptic active
zone" evidence=IDA] [GO:0048790 "maintenance of presynaptic active
zone structure" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
EMBL:AE013599 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0016192 GO:GO:0015031 GO:GO:0030054 GO:GO:0008021
GO:GO:0048786 GO:GO:0006887 PROSITE:PS51419 GO:GO:0007269
eggNOG:COG1100 KO:K07976 GeneTree:ENSGT00690000101942 GO:GO:0048790
EMBL:M64621 EMBL:AB112932 EMBL:AY060449 PIR:JH0425
RefSeq:NP_523687.1 UniGene:Dm.2584 ProteinModelPortal:P25228
SMR:P25228 DIP:DIP-20159N MINT:MINT-946687 STRING:P25228
PaxDb:P25228 PRIDE:P25228 EnsemblMetazoa:FBtr0088257 GeneID:36127
KEGG:dme:Dmel_CG7576 CTD:36127 FlyBase:FBgn0005586
InParanoid:P25228 OMA:RLVDLIC OrthoDB:EOG4TDZ29 PhylomeDB:P25228
ChiTaRS:Rab3 GenomeRNAi:36127 NextBio:796987 Bgee:P25228
GermOnline:CG7576 Uniprot:P25228
Length = 220
Score = 284 (105.0 bits), Expect = 2.9e-30, Sum P(2) = 2.9e-30
Identities = 49/118 (41%), Positives = 84/118 (71%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F +T+G+DF +KTV +++R+KLQIW
Sbjct: 16 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIW 75
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQER+R+IT +YYR A IL+YD++ + +F+ + DW+ +I+ Y+ +LVG
Sbjct: 76 DTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVG 133
Score = 84 (34.6 bits), Expect = 2.9e-30, Sum P(2) = 2.9e-30
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D ED R I E G A + + + ETSAK + NV+ +F ++ + +K++E L
Sbjct: 134 NKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSESL 190
>FB|FBgn0052670 [details] [associations]
symbol:Rab9Fb "Rab at 9Fb" species:7227 "Drosophila
melanogaster" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AE014298
KO:K07976 HSSP:P07560 GeneTree:ENSGT00700000104049 EMBL:BT024998
RefSeq:NP_727472.1 UniGene:Dm.31082 SMR:Q8IR98
EnsemblMetazoa:FBtr0073401 GeneID:32029 KEGG:dme:Dmel_CG32670
UCSC:CG32670-RA CTD:32029 FlyBase:FBgn0052670 InParanoid:Q8IR98
OMA:KTCLLQR OrthoDB:EOG4RN8RG GenomeRNAi:32029 NextBio:776451
Uniprot:Q8IR98
Length = 214
Score = 297 (109.6 bits), Expect = 3.2e-30, Sum P(2) = 3.2e-30
Identities = 54/119 (45%), Positives = 79/119 (66%)
Query: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQI 60
M Y +LFK++++G+ GVGK+CL+ RF+ F T+G+DF ++ VE+ + LQI
Sbjct: 1 MSQYDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQI 60
Query: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
WDTAG ERF+S+ SYYR AH ++LVYDI+ +F + WL+EI +S V +LVG
Sbjct: 61 WDTAGDERFKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVG 119
Score = 70 (29.7 bits), Expect = 3.2e-30, Sum P(2) = 3.2e-30
Identities = 15/65 (23%), Positives = 32/65 (49%)
Query: 189 LEGHSNNIHCMARNKIDREDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAE 248
+ S N+ + D ++R++ E G ++A + + E SAK+ NV +F ++
Sbjct: 108 MSSESVNVMLVGNKCDDLDNRQVRMEQGFNYANHRALGFYEVSAKSGANVNDVFNMLSVG 167
Query: 249 LMEKL 253
+ +L
Sbjct: 168 IYNRL 172
>UNIPROTKB|E2RHH4 [details] [associations]
symbol:RAB3D "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101942 OMA:GKGPTLG EMBL:AAEX03012413
Ensembl:ENSCAFT00000037393 Uniprot:E2RHH4
Length = 228
Score = 295 (108.9 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 53/124 (42%), Positives = 85/124 (68%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++L+GN+ VGKT + R+ F P +T+G+DF +KTV +++RIKLQIW
Sbjct: 17 QNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIW 76
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQER+R+IT +YYR A +L+YD++ Q +F + DW +I+ Y+ +LVG
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFLLMYDVANQESFAAVQDWATQIKTYSWDNAQVILVGNK 136
Query: 122 SGLK 125
L+
Sbjct: 137 CDLE 140
Score = 72 (30.4 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 202 NKIDRED-REIPTEVGEDFAKR--------HDMY-YLETSAKASDNVEKLFMQIAAELME 251
NK D ED R +PTE G K H + + E SAK + NV+++F ++ + E
Sbjct: 135 NKCDLEDERVVPTEDGRRLKKELGCFEAEPHTGFEFFEASAKENINVKQVFERLVDIICE 194
Query: 252 KLAEKL 257
K+ E L
Sbjct: 195 KMNESL 200
>UNIPROTKB|F1N8D8 [details] [associations]
symbol:RAB26 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104031 EMBL:AADN02023658
EMBL:AADN02023659 IPI:IPI00594309 ProteinModelPortal:F1N8D8
Ensembl:ENSGALT00000009235 Uniprot:F1N8D8
Length = 159
Score = 317 (116.6 bits), Expect = 3.4e-30, Sum P(2) = 3.4e-30
Identities = 59/112 (52%), Positives = 84/112 (75%)
Query: 9 KVVLVGNAGVGKTCLVRRFTQGVFPPGQG-ATIGVDFMIKTVEINNERIKLQIWDTAGQE 67
+V+LVG++GVGKTCL+ RF G F G +T+G+DF K + ++ ++KLQIWDTAGQE
Sbjct: 1 QVMLVGDSGVGKTCLLVRFKDGAFLAGSFISTVGIDFRNKVLTVDGVKVKLQIWDTAGQE 60
Query: 68 RFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
RFRS+T +YYR AHAL+L+YD++ + +FD + WL EI EYA V+ +L+G
Sbjct: 61 RFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQQDVVLMLLG 112
Score = 49 (22.3 bits), Expect = 3.4e-30, Sum P(2) = 3.4e-30
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 227 YLETSAKASDNVEKLFMQIA 246
++ETSAK+ NVE F IA
Sbjct: 139 FMETSAKSGLNVELAFTAIA 158
>UNIPROTKB|F1M860 [details] [associations]
symbol:F1M860 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104288 IPI:IPI00392179
ProteinModelPortal:F1M860 Ensembl:ENSRNOT00000035706 OMA:MYDITAK
Uniprot:F1M860
Length = 198
Score = 284 (105.0 bits), Expect = 3.6e-30, Sum P(2) = 3.6e-30
Identities = 47/113 (41%), Positives = 79/113 (69%)
Query: 7 LFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAGQ 66
LFK+V VG++ VGKT +RR + F PG AT+G+D+ +KTV ++N ++ LQ+WDTAGQ
Sbjct: 39 LFKIVFVGDSAVGKTSFLRRLCEARFSPGMAATVGIDYRVKTVTVDNAQVALQLWDTAGQ 98
Query: 67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
ER+R I+Q ++R A ++++YD++ + +F + WL +EE ++ +L+G
Sbjct: 99 ERYRCISQQFFRKADGVVVMYDLTAKQSFLSIRQWLSSVEEAVGDRIPVLLLG 151
Score = 83 (34.3 bits), Expect = 3.6e-30, Sum P(2) = 3.6e-30
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 202 NKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIA 246
NK+D E +RE+P +GE AK +++ + E SA + N ++ + +A
Sbjct: 152 NKLDNEKEREVPRGLGEQLAKENNLIFYECSACSGHNTKESLLHLA 197
>TAIR|locus:2142684 [details] [associations]
symbol:RAB8C "RAB GTPase homolog 8C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0000139 EMBL:AL162751
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOGENOM:HOG000233968
HSSP:P07560 KO:K07901 EMBL:AY035124 EMBL:AY056351 EMBL:AY087058
IPI:IPI00531864 IPI:IPI00656868 PIR:T48378 RefSeq:NP_001031827.1
RefSeq:NP_195972.1 UniGene:At.4875 ProteinModelPortal:Q9LZD4
SMR:Q9LZD4 STRING:Q9LZD4 PaxDb:Q9LZD4 PRIDE:Q9LZD4
EnsemblPlants:AT5G03520.1 GeneID:831817 KEGG:ath:AT5G03520
TAIR:At5g03520 InParanoid:Q9LZD4 OMA:DSFNTTF PhylomeDB:Q9LZD4
ProtClustDB:CLSN2685165 Genevestigator:Q9LZD4 Uniprot:Q9LZD4
Length = 216
Score = 341 (125.1 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 66/155 (42%), Positives = 106/155 (68%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ F TIG+DF I+TVE++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W++ IE++AS V ++LVG +
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDNVNKILVGNKA 130
Query: 123 GL-KIVNEMASAAGLLCTVDPALATALASDKTDLD 156
+ + + +A G + + S KT+L+
Sbjct: 131 DMDESKRAVPTAKGQALADEYGIKFFETSAKTNLN 165
Score = 124 (48.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S+N++ + NK D ++ R +PT G+ A + + + ETSAK + NVE
Sbjct: 109 WMKNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEN 168
Query: 241 LFMQIAAELMEKLAEKLTIMHDRGV 265
+FM IA ++ ++L E T +G+
Sbjct: 169 VFMSIAKDIKQRLTETDTKAEPQGI 193
>TAIR|locus:2129161 [details] [associations]
symbol:RAB1C "RAB GTPase homolog 1C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0009555 "pollen development" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IGI] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886 GO:GO:0009506
GO:GO:0005794 GO:GO:0005773 GO:GO:0007264 GO:GO:0000139
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016192 GO:GO:0009555
GO:GO:0015031 GO:GO:0009860 PROSITE:PS51419 EMBL:Z97343
eggNOG:COG1100 EMBL:AL161546 HOGENOM:HOG000233968 HSSP:P07560
KO:K07874 UniGene:At.24811 ProtClustDB:CLSN2685987 EMBL:AF127134
EMBL:AY052204 EMBL:AY060495 EMBL:AK227290 IPI:IPI00546817
PIR:H71444 RefSeq:NP_193486.1 UniGene:At.22483 UniGene:At.48871
ProteinModelPortal:Q9SEH3 SMR:Q9SEH3 STRING:Q9SEH3 PaxDb:Q9SEH3
PRIDE:Q9SEH3 ProMEX:Q9SEH3 EnsemblPlants:AT4G17530.1 GeneID:827468
KEGG:ath:AT4G17530 TAIR:At4g17530 InParanoid:Q9SEH3 OMA:IDSTPVR
PhylomeDB:Q9SEH3 Genevestigator:Q9SEH3 Uniprot:Q9SEH3
Length = 202
Score = 341 (125.1 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 74/159 (46%), Positives = 107/159 (67%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+TVE + + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+ YD++ +F+ + WL EI+ YAS V ++LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 123 GL---KIVN-EMASAAGLLCTVDPALATALASDKTDLDE 157
L K+V+ E A A + P L T+ A + T+++E
Sbjct: 124 DLTSQKVVSTETAKAFADELGI-PFLETS-AKNATNVEE 160
>ZFIN|ZDB-GENE-070424-36 [details] [associations]
symbol:rab8a "RAB8A, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0035845 "photoreceptor cell outer segment organization"
evidence=IGI;IMP] [GO:0032402 "melanosome transport" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-070424-36 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0035845
GeneTree:ENSGT00700000104031 EMBL:CU693492 IPI:IPI00844893
ProteinModelPortal:F1QAX4 Ensembl:ENSDART00000086326 Uniprot:F1QAX4
Length = 210
Score = 341 (125.1 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 64/159 (40%), Positives = 108/159 (67%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++ ++IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYDI+ + +FD + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMILGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDEHVL 162
+ +++ G ++ + S K +++ + L
Sbjct: 125 INEKRQVSKDRGEKLALEYGIKFMETSAKANINVENAFL 163
>GENEDB_PFALCIPARUM|PFA0335w [details] [associations]
symbol:Rab5c "Rab5c, GTPase" species:5833
"Plasmodium falciparum" [GO:0003924 "GTPase activity" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0003924
EMBL:AL844501 KO:K07976 HOGENOM:HOG000233968 HSSP:P20339
OMA:GTQGKIC GenomeReviews:AL844501_GR RefSeq:XP_001350999.1
ProteinModelPortal:Q8I274 SMR:Q8I274 PRIDE:Q8I274
EnsemblProtists:PFA0335w:mRNA GeneID:813204 KEGG:pfa:PFA_0335w
ProtClustDB:CLSZ2444920 Uniprot:Q8I274
Length = 214
Score = 251 (93.4 bits), Expect = 4.7e-30, Sum P(2) = 4.7e-30
Identities = 49/120 (40%), Positives = 75/120 (62%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAG 65
F K+VL+G+ VGK+C+V RF + F Q +TIG FM + ++I IK +IWDTAG
Sbjct: 26 FNSKLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGAAFMTQLIDIGECTIKFEIWDTAG 85
Query: 66 QERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSGLK 125
QER+RS+ YYR A A ++VYDI+ + +F+ W+ E++ S ++ L G + L+
Sbjct: 86 QERYRSLAPMYYRGASAAVIVYDITNKKSFEGAKGWIHELKSVHSNDIIIALAGNKNDLE 145
Score = 116 (45.9 bits), Expect = 4.7e-30, Sum P(2) = 4.7e-30
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 192 HSNNIH-CMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAEL 249
HSN+I +A NK D E+ R + E+ E FA +++ ++ETSAK NV +LF++IA +L
Sbjct: 129 HSNDIIIALAGNKNDLEEHRAVDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKL 188
>UNIPROTKB|Q8I274 [details] [associations]
symbol:Rab5c "Rab5c, GTPase" species:36329 "Plasmodium
falciparum 3D7" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0003924
EMBL:AL844501 KO:K07976 HOGENOM:HOG000233968 HSSP:P20339
OMA:GTQGKIC GenomeReviews:AL844501_GR RefSeq:XP_001350999.1
ProteinModelPortal:Q8I274 SMR:Q8I274 PRIDE:Q8I274
EnsemblProtists:PFA0335w:mRNA GeneID:813204 KEGG:pfa:PFA_0335w
ProtClustDB:CLSZ2444920 Uniprot:Q8I274
Length = 214
Score = 251 (93.4 bits), Expect = 4.7e-30, Sum P(2) = 4.7e-30
Identities = 49/120 (40%), Positives = 75/120 (62%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAG 65
F K+VL+G+ VGK+C+V RF + F Q +TIG FM + ++I IK +IWDTAG
Sbjct: 26 FNSKLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGAAFMTQLIDIGECTIKFEIWDTAG 85
Query: 66 QERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSGLK 125
QER+RS+ YYR A A ++VYDI+ + +F+ W+ E++ S ++ L G + L+
Sbjct: 86 QERYRSLAPMYYRGASAAVIVYDITNKKSFEGAKGWIHELKSVHSNDIIIALAGNKNDLE 145
Score = 116 (45.9 bits), Expect = 4.7e-30, Sum P(2) = 4.7e-30
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 192 HSNNIH-CMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAEL 249
HSN+I +A NK D E+ R + E+ E FA +++ ++ETSAK NV +LF++IA +L
Sbjct: 129 HSNDIIIALAGNKNDLEEHRAVDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKL 188
>TAIR|locus:2085089 [details] [associations]
symbol:RABE1e "RAB GTPase homolog E1E" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000394 "RNA splicing, via
endonucleolytic cleavage and ligation" evidence=RCA] [GO:0009086
"methionine biosynthetic process" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0007264 GO:GO:0000139
EMBL:AC015985 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
KO:K07976 HOGENOM:HOG000233968 HSSP:P07560 OMA:TSFFRCL
ProtClustDB:CLSN2685165 EMBL:BT024925 EMBL:AK229294 EMBL:AY084345
IPI:IPI00547488 RefSeq:NP_187601.1 UniGene:At.40023
ProteinModelPortal:Q9SF91 SMR:Q9SF91 STRING:Q9SF91 PaxDb:Q9SF91
PRIDE:Q9SF91 EnsemblPlants:AT3G09900.1 GeneID:820148
KEGG:ath:AT3G09900 TAIR:At3g09900 InParanoid:Q9SF91
PhylomeDB:Q9SF91 Genevestigator:Q9SF91 Uniprot:Q9SF91
Length = 218
Score = 340 (124.7 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 60/122 (49%), Positives = 93/122 (76%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
DY +L K++L+G++GVGK+CL+ RF+ F TIG+DF I+TVE++ +RIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT +YYR A ++LVYD++ + +F+ + +W++ IE++AS V ++LVG +
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDSVNKILVGNKA 130
Query: 123 GL 124
+
Sbjct: 131 DM 132
Score = 125 (49.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 30/106 (28%), Positives = 62/106 (58%)
Query: 185 YLASLEGH-SNNIH-CMARNKIDRED--REIPTEVGEDFAKRHDMYYLETSAKASDNVEK 240
++ ++E H S++++ + NK D ++ R +PT G+ A + + + ETSAK + NVE+
Sbjct: 109 WMKNIEQHASDSVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQ 168
Query: 241 LFMQIAAELMEKLAEKLTIMHDRGVGMLTRIYNIKKACGDAKSKPS 286
+F+ IA ++ ++L E T +G+ +T+ + KA + ++ S
Sbjct: 169 VFLSIAKDIKQRLTESDTKAEPQGI-KITK-QDANKASSSSTNEKS 212
>DICTYBASE|DDB_G0277867 [details] [associations]
symbol:rab1B "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0277867 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GenomeReviews:CM000152_GR GO:GO:0015031 EMBL:AAFI02000023
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 EMBL:L21010
RefSeq:XP_642309.1 ProteinModelPortal:P34140 SMR:P34140
PRIDE:P34140 EnsemblProtists:DDB0214820 GeneID:8621515
KEGG:ddi:DDB_G0277867 OMA:MIMASEI Uniprot:P34140
Length = 206
Score = 340 (124.7 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 71/165 (43%), Positives = 110/165 (66%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y +LFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+ ++ + IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWD 63
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERFR+IT SYYR AH +I+VYD++ +F+ + W++EI+ YA V R+LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKC 123
Query: 123 GL---KIVNEMASAAGLLCTVD-PALATALASDKTDLDEDEHVLA 163
L KIV + ++A +V P L T+ A ++++ ++A
Sbjct: 124 DLIEKKIV-DTSTAREYADSVGIPFLETS-AKSSANVEQAFMIMA 166
>UNIPROTKB|I3LHP6 [details] [associations]
symbol:RAB3B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030141 "secretory granule" evidence=IEA] [GO:0018125
"peptidyl-cysteine methylation" evidence=IEA] [GO:0017157
"regulation of exocytosis" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0008021
GO:GO:0030141 GO:GO:0017157 GO:GO:0018125
GeneTree:ENSGT00690000101942 OMA:WFDFFEA EMBL:CU468046
Ensembl:ENSSSCT00000028423 Uniprot:I3LHP6
Length = 228
Score = 293 (108.2 bits), Expect = 5.4e-30, Sum P(2) = 5.4e-30
Identities = 51/118 (43%), Positives = 82/118 (69%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F P +T+G+DF +KTV +R+KLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRQEKRVKLQIW 76
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW +I+ Y+ +LVG
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVG 134
Score = 72 (30.4 bits), Expect = 5.4e-30, Sum P(2) = 5.4e-30
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 202 NKID-REDREIPTEVGEDFAKRHDMY--YL-------ETSAKASDNVEKLFMQIAAELME 251
NK D E+R +PTE G+ A++ MY YL E SAK + +V + F ++ + +
Sbjct: 135 NKCDMEEERVVPTEKGQLLAEQLGMYMTYLYDWFDFFEASAKENISVRQAFERLVDAICD 194
Query: 252 KLAEKL 257
K+++ L
Sbjct: 195 KMSDTL 200
>ZFIN|ZDB-GENE-030826-30 [details] [associations]
symbol:rab13 "RAB13, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-030826-30 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GO:GO:0001525 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P07560 CTD:5872
GeneTree:ENSGT00700000104031 KO:K06109 OrthoDB:EOG4BVRVS
OMA:AMGIVLI EMBL:BX004983 EMBL:BC053195 IPI:IPI00509437
RefSeq:NP_958486.1 UniGene:Dr.20822 SMR:Q7T3A4
Ensembl:ENSDART00000046922 GeneID:373105 KEGG:dre:373105
InParanoid:Q7T3A4 NextBio:20813372 Uniprot:Q7T3A4
Length = 200
Score = 339 (124.4 bits), Expect = 6.3e-30, P = 6.3e-30
Identities = 62/156 (39%), Positives = 105/156 (67%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y FLFK++L+G++GVGKTCL+ RF + F +TIG+DF +KT+E+ +++KLQ+WDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVEGKKVKLQVWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERF++IT +YYR A +ILVYDI+ + +++ + +W++ I+E AS V R+L+G
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSYENIQNWMKSIKENASAGVSRMLLGNKCD 124
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
++ +++ G + + S K+ ++ +E
Sbjct: 125 IEAKRKVSKETGEKLAKEHGIRFFETSAKSSINVEE 160
>UNIPROTKB|E1C6J7 [details] [associations]
symbol:RAB17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0005622 CTD:64284 KO:K07909 OMA:KLLFMET
GeneTree:ENSGT00640000091139 EMBL:AADN02034487 IPI:IPI00574832
RefSeq:XP_421874.2 UniGene:Gga.8154 Ensembl:ENSGALT00000006196
GeneID:424017 KEGG:gga:424017 NextBio:20826403 Uniprot:E1C6J7
Length = 213
Score = 249 (92.7 bits), Expect = 7.8e-30, Sum P(2) = 7.8e-30
Identities = 49/131 (37%), Positives = 80/131 (61%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDTAG 65
+++K+VL+G+ VGK+ L R+ + F T+G F +T+++ IKL+IWDTAG
Sbjct: 18 YIYKMVLLGSTSVGKSSLAYRYVKNDFKESL-PTVGCSFFTQTIQLETATIKLEIWDTAG 76
Query: 66 QERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIE-EYASFKVLRVLVGGTSGL 124
QE++ S+ YYR AHA +LVYD++ + T + WL E+E E+ +++ LVG + L
Sbjct: 77 QEKYHSVCHLYYRGAHAALLVYDLTNKETLNRAKQWLMELEKEFLPDEIVIALVGNKTDL 136
Query: 125 KIVNEMASAAG 135
E+A+ G
Sbjct: 137 ADEREVAAEDG 147
Score = 116 (45.9 bits), Expect = 7.8e-30, Sum P(2) = 7.8e-30
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKLTI 259
NK D D RE+ E GE+FA+ + ++ETSAK++ V +FM +A EL+ + +K +
Sbjct: 132 NKTDLADEREVAAEDGEEFARSRSLLFMETSAKSNHQVNDVFMAVAQELLRREGKKAAV 190
>ZFIN|ZDB-GENE-070620-7 [details] [associations]
symbol:zgc:165464 "zgc:165464" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-070620-7 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00690000101664 OrthoDB:EOG43JC5J
KO:K07925 OMA:TKSDRRC EMBL:CT025910 EMBL:BC142804 IPI:IPI00485605
RefSeq:NP_001092211.1 UniGene:Dr.111079 Ensembl:ENSDART00000019199
GeneID:562596 KEGG:dre:562596 NextBio:20884483 Uniprot:A5PLA1
Length = 213
Score = 279 (103.3 bits), Expect = 7.8e-30, Sum P(2) = 7.8e-30
Identities = 53/116 (45%), Positives = 83/116 (71%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEIN-NERIKLQIWDTA 64
+ F+++++G++ VGK+CL+RRFT+G F T+GVDF + VEI +RIKLQIWDTA
Sbjct: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTA 66
Query: 65 GQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYAS-FKVLRVLVG 119
GQERFRSIT++YYR++ +L++DI+ + +F + +WL E + ++ +LVG
Sbjct: 67 GQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEARSHVQPHSIVFILVG 122
Score = 85 (35.0 bits), Expect = 7.8e-30, Sum P(2) = 7.8e-30
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 189 LEGHSNNIHCMARNKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAA 247
++ HS + + +K D E R++ + E A + M Y+ETSA+ + NVEK F ++
Sbjct: 111 VQPHSI-VFILVGHKCDLEQQRQVSQQEAEKLAAAYGMRYVETSARDAINVEKAFTELTR 169
Query: 248 ELME 251
++ E
Sbjct: 170 DIFE 173
>UNIPROTKB|E9PU16 [details] [associations]
symbol:Rab1 "Protein Rab1" species:10116 "Rattus
norvegicus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:619736 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 GeneTree:ENSGT00700000104049
IPI:IPI00382300 PRIDE:E9PU16 Ensembl:ENSRNOT00000021040
ArrayExpress:E9PU16 Uniprot:E9PU16
Length = 300
Score = 274 (101.5 bits), Expect = 8.1e-30, Sum P(2) = 8.1e-30
Identities = 59/129 (45%), Positives = 88/129 (68%)
Query: 38 ATIGVDFMIKTVEINNERIKLQIWDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDC 97
+TIGVDF I+T+E++ + IKLQIWDTAGQERFR+IT SYYR AH +I+VYD++ Q +F+
Sbjct: 77 STIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNN 136
Query: 98 LTDWLREIEEYASFKVLRVLVGGTSGL--KIVNEMASAAGLLCTVD-PALATALASDKTD 154
+ WL+EI+ YAS V ++LVG L K V + +A ++ P L T+ A + T+
Sbjct: 137 VKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETS-AKNATN 195
Query: 155 LDEDEHVLA 163
+++ +A
Sbjct: 196 VEQSFMTMA 204
Score = 90 (36.7 bits), Expect = 8.1e-30, Sum P(2) = 8.1e-30
Identities = 14/27 (51%), Positives = 24/27 (88%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQ 29
+Y +LFK++L+G++GVGK+CL+ RF +
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFAE 30
Score = 87 (35.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 193 SNNIH-CMARNKIDREDREIPT-EVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELM 250
S N++ + NK D +++ ++FA + +LETSAK + NVE+ FM +AAE+
Sbjct: 149 SENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIK 208
Query: 251 EKLAEKLT 258
+++ T
Sbjct: 209 KRMGPGAT 216
>ZFIN|ZDB-GENE-080722-14 [details] [associations]
symbol:rab3da "RAB3D, member RAS oncogene family, a"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-080722-14 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
EMBL:BX901942 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101942 OrthoDB:EOG4TB4C6 IPI:IPI00631632
RefSeq:NP_001139069.1 UniGene:Dr.80431 Ensembl:ENSDART00000023757
Ensembl:ENSDART00000146372 GeneID:567288 CTD:567288
NextBio:20888605 Uniprot:B8A665
Length = 223
Score = 288 (106.4 bits), Expect = 9.2e-30, Sum P(2) = 9.2e-30
Identities = 52/124 (41%), Positives = 83/124 (66%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F +T+G+DF +KTV N +R+KLQIW
Sbjct: 20 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVYRNEKRVKLQIW 79
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGT 121
DTAGQER+R+IT +YYR A +L+YDI+ Q +F + DW +I+ Y+ +LVG
Sbjct: 80 DTAGQERYRTITTAYYRGAMGFLLMYDITNQDSFYAVQDWATQIKTYSWDNAQVILVGNK 139
Query: 122 SGLK 125
L+
Sbjct: 140 CDLE 143
Score = 75 (31.5 bits), Expect = 9.2e-30, Sum P(2) = 9.2e-30
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D ED R + E G+ A + E SAK + NV+++F ++ + +K+ E L
Sbjct: 138 NKCDLEDDRLVAREDGQRLANELGFQFFEASAKDNINVKQVFERLVDIICDKMNESL 194
Score = 46 (21.3 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 660 GMKLLNELSLKAFNAAHEMVHNQSDVNFPRLGQMIMD 696
G +L NEL + F A+ + N V F RL +I D
Sbjct: 153 GQRLANELGFQFFEASAKDNINVKQV-FERLVDIICD 188
>UNIPROTKB|E1BF18 [details] [associations]
symbol:RAB3C "Ras-related protein Rab-3C" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00690000101942 EMBL:DAAA02050293
EMBL:DAAA02050288 EMBL:DAAA02050289 EMBL:DAAA02050290
EMBL:DAAA02050291 EMBL:DAAA02050292 IPI:IPI00906126
Ensembl:ENSBTAT00000054286 ArrayExpress:E1BF18 Uniprot:E1BF18
Length = 218
Score = 275 (101.9 bits), Expect = 1.0e-29, Sum P(2) = 1.0e-29
Identities = 52/119 (43%), Positives = 83/119 (69%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F +T+G+DF +KTV N +RIKLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIW 76
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDW-LREIEEYASFKVLRVLVG 119
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW L + + + +V +LVG
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSLNQTYSWDNAQV--ILVG 133
Score = 88 (36.0 bits), Expect = 1.0e-29, Sum P(2) = 1.0e-29
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 202 NKIDRED-REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D ED R I TE G+ ++ + ETSAK + NV++ F ++ + +K++E L
Sbjct: 134 NKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 190
>DICTYBASE|DDB_G0269174 [details] [associations]
symbol:rab1C "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0269174 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 KO:K07976 HSSP:P55258 EMBL:AB015237
RefSeq:XP_646027.1 ProteinModelPortal:O76173 SMR:O76173
PRIDE:O76173 EnsemblProtists:DDB0191203 GeneID:8616975
KEGG:ddi:DDB_G0269174 OMA:CIRTIEL Uniprot:O76173
Length = 201
Score = 337 (123.7 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 67/158 (42%), Positives = 105/158 (66%)
Query: 3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWD 62
+Y L K++++G++GVGK+C++ RF F +TIGVDF I+T+E++ ++IKLQIWD
Sbjct: 29 EYDMLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWD 88
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTS 122
TAGQERF++IT SYYR AH LI+VYDI+ +F+ + WL +++ +AS VL+++VG
Sbjct: 89 TAGQERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPSVLKLIVGNKC 148
Query: 123 GL--KIVNEMASAAGLLCTVD-PALATALASDKTDLDE 157
L K + A ++ P + T+ A + T +DE
Sbjct: 149 DLNSKRAVDFKIAKKFADELNIPIMETS-AKESTAIDE 185
>ZFIN|ZDB-GENE-040718-263 [details] [associations]
symbol:rab3c "RAB3C, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040718-263 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101942 OrthoDB:EOG4TB4C6 OMA:RLVDLIC
EMBL:BX510928 IPI:IPI00489060 UniGene:Dr.33726 SMR:A8WHV3
Ensembl:ENSDART00000132687 Uniprot:A8WHV3
Length = 224
Score = 288 (106.4 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 52/119 (43%), Positives = 84/119 (70%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F +T+G+DF +KTV N++RIKLQIW
Sbjct: 21 QNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTSAFVSTVGIDFKVKTVYKNDKRIKLQIW 80
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGG 120
DTAGQER+R+IT +YYR A IL+YDI+ + +F + DW +I+ Y S+ +V++ G
Sbjct: 81 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFAAVQDWATQIKTY-SWDNAQVILAG 138
Score = 74 (31.1 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 199 MARNKID-REDREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
+A NK D E+R + + G A++ + ETSAK + NV++ F ++ + +K+++ L
Sbjct: 136 LAGNKCDMEEERIVSVDSGRLLAEQLGFEFFETSAKDNINVKQTFDRLVDIICDKMSDTL 195
>UNIPROTKB|Q96DA2 [details] [associations]
symbol:RAB39B "Ras-related protein Rab-39B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0016192 "vesicle-mediated transport" evidence=ISS] [GO:0050808
"synapse organization" evidence=ISS] [GO:0005622 "intracellular"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0007264 GO:GO:0016192 GO:GO:0015031 GO:GO:0050808
Orphanet:777 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
EMBL:AL356738 HOGENOM:HOG000233968 OrthoDB:EOG43JC5J CTD:116442
KO:K07925 OMA:TKSDRRC EMBL:AY052478 EMBL:AL834460 EMBL:BC009714
IPI:IPI00060801 RefSeq:NP_741995.1 UniGene:Hs.632832
ProteinModelPortal:Q96DA2 SMR:Q96DA2 STRING:Q96DA2
PhosphoSite:Q96DA2 DMDM:27734447 PaxDb:Q96DA2 PeptideAtlas:Q96DA2
PRIDE:Q96DA2 DNASU:116442 Ensembl:ENST00000369454 GeneID:116442
KEGG:hsa:116442 UCSC:uc004fne.3 GeneCards:GC0XM154487
HGNC:HGNC:16499 HPA:HPA001114 MIM:300271 MIM:300774
neXtProt:NX_Q96DA2 PharmGKB:PA34131 InParanoid:Q96DA2
PhylomeDB:Q96DA2 GenomeRNAi:116442 NextBio:79915 Bgee:Q96DA2
CleanEx:HS_RAB39B Genevestigator:Q96DA2 GermOnline:ENSG00000155961
Uniprot:Q96DA2
Length = 213
Score = 284 (105.0 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 54/116 (46%), Positives = 86/116 (74%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEIN-NERIKLQIWDTA 64
+ F+++++G++ VGK+CL+RRFT+G F T+GVDF + VEI +RIKLQIWDTA
Sbjct: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTA 66
Query: 65 GQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYAS-FKVLRVLVG 119
GQERFRSIT++YYR++ +L++DI+ + +F + +WL E + + ++++ VLVG
Sbjct: 67 GQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVG 122
Score = 78 (32.5 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 196 IHCMARNKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
+ + +K D + R++ E A + M Y+ETSA+ + NVEK F + ++ E +
Sbjct: 117 VFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVK 176
Query: 255 E-KLTI 259
++TI
Sbjct: 177 RGEITI 182
>MGI|MGI:1915040 [details] [associations]
symbol:Rab39b "RAB39B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=ISO;IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IMP] [GO:0050808 "synapse organization" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1915040
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0007264 GO:GO:0016192 GO:GO:0015031 GO:GO:0050808
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00690000101664 OrthoDB:EOG43JC5J
CTD:116442 KO:K07925 EMBL:AK039013 EMBL:AK048981 EMBL:AK160737
EMBL:BC050853 EMBL:BC052472 IPI:IPI00272230 RefSeq:NP_780331.1
UniGene:Mm.45148 ProteinModelPortal:Q8BHC1 SMR:Q8BHC1
PhosphoSite:Q8BHC1 PaxDb:Q8BHC1 PRIDE:Q8BHC1
Ensembl:ENSMUST00000033545 GeneID:67790 KEGG:mmu:67790
InParanoid:Q8BHC1 NextBio:325571 Bgee:Q8BHC1 CleanEx:MM_RAB39B
Genevestigator:Q8BHC1 GermOnline:ENSMUSG00000031202 Uniprot:Q8BHC1
Length = 213
Score = 284 (105.0 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 54/116 (46%), Positives = 86/116 (74%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEIN-NERIKLQIWDTA 64
+ F+++++G++ VGK+CL+RRFT+G F T+GVDF + VEI +RIKLQIWDTA
Sbjct: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTA 66
Query: 65 GQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYAS-FKVLRVLVG 119
GQERFRSIT++YYR++ +L++DI+ + +F + +WL E + + ++++ VLVG
Sbjct: 67 GQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVG 122
Score = 78 (32.5 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 196 IHCMARNKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLA 254
+ + +K D + R++ E A + M Y+ETSA+ + NVEK F + ++ E +
Sbjct: 117 VFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVK 176
Query: 255 E-KLTI 259
++TI
Sbjct: 177 RGEITI 182
>UNIPROTKB|Q17QU4 [details] [associations]
symbol:RAB39B "Ras-related protein Rab-39B" species:9913
"Bos taurus" [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0050808 "synapse organization" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0016192 GO:GO:0015031 GO:GO:0050808 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 OrthoDB:EOG43JC5J EMBL:BC118177
IPI:IPI00691206 RefSeq:NP_001069563.1 UniGene:Bt.55967
ProteinModelPortal:Q17QU4 PRIDE:Q17QU4 Ensembl:ENSBTAT00000026354
GeneID:537560 KEGG:bta:537560 CTD:116442 InParanoid:Q17QU4
KO:K07925 OMA:TKSDRRC NextBio:20877158 Uniprot:Q17QU4
Length = 213
Score = 284 (105.0 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 54/116 (46%), Positives = 86/116 (74%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEIN-NERIKLQIWDTA 64
+ F+++++G++ VGK+CL+RRFT+G F T+GVDF + VEI +RIKLQIWDTA
Sbjct: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTA 66
Query: 65 GQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYAS-FKVLRVLVG 119
GQERFRSIT++YYR++ +L++DI+ + +F + +WL E + + ++++ VLVG
Sbjct: 67 GQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVG 122
Score = 77 (32.2 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 196 IHCMARNKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELME 251
+ + +K D + R++ E A + M Y+ETSA+ + NVEK F + ++ E
Sbjct: 117 VFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYE 173
>UNIPROTKB|F2Z552 [details] [associations]
symbol:LOC100516775 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0050808 "synapse organization" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0016192
GO:GO:0015031 GO:GO:0050808 GeneTree:ENSGT00690000101664 KO:K07925
OMA:TKSDRRC EMBL:CU861979 RefSeq:XP_003135565.1
ProteinModelPortal:F2Z552 PRIDE:F2Z552 Ensembl:ENSSSCT00000022617
GeneID:100516775 KEGG:ssc:100516775 Uniprot:F2Z552
Length = 213
Score = 284 (105.0 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 54/116 (46%), Positives = 86/116 (74%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEIN-NERIKLQIWDTA 64
+ F+++++G++ VGK+CL+RRFT+G F T+GVDF + VEI +RIKLQIWDTA
Sbjct: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTA 66
Query: 65 GQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYAS-FKVLRVLVG 119
GQERFRSIT++YYR++ +L++DI+ + +F + +WL E + + ++++ VLVG
Sbjct: 67 GQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVG 122
Score = 77 (32.2 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 196 IHCMARNKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELME 251
+ + +K D + R++ E A + M Y+ETSA+ + NVEK F + ++ E
Sbjct: 117 VFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYE 173
>WB|WBGene00004267 [details] [associations]
symbol:rab-3 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA;ISS] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0007271 "synaptic transmission, cholinergic"
evidence=IMP] [GO:0040012 "regulation of locomotion" evidence=IMP]
[GO:0007617 "mating behavior" evidence=IMP] [GO:0006935
"chemotaxis" evidence=IMP] [GO:0043051 "regulation of pharyngeal
pumping" evidence=IMP] [GO:0008021 "synaptic vesicle" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0008021
GO:GO:0003924 GO:GO:0007617 GO:GO:0040017 GO:GO:0007271
GO:GO:0006935 GO:GO:0043051 EMBL:FO080599 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 GeneTree:ENSGT00690000101942
OMA:QLTEQPA UniGene:Cel.19709 GeneID:173971 KEGG:cel:CELE_C18A3.6
UCSC:C18A3.6a CTD:173971 NextBio:881917 RefSeq:NP_001021973.1
ProteinModelPortal:Q95QV3 SMR:Q95QV3 STRING:Q95QV3 PRIDE:Q95QV3
EnsemblMetazoa:C18A3.6a WormBase:C18A3.6a InParanoid:Q95QV3
ArrayExpress:Q95QV3 Uniprot:Q95QV3
Length = 233
Score = 282 (104.3 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 51/118 (43%), Positives = 82/118 (69%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F +T+G+DF +KTV ++R+KLQIW
Sbjct: 31 QNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 90
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW +I+ Y+ VLVG
Sbjct: 91 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVG 148
Score = 79 (32.9 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 202 NKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D + +R + + G A + + + ETSAK + NV+ +F ++ + +K+AE L
Sbjct: 149 NKCDMDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEIICDKMAESL 205
>UNIPROTKB|Q94986 [details] [associations]
symbol:rab-3 "Ras-related protein Rab-3" species:6239
"Caenorhabditis elegans" [GO:0006184 "GTP catabolic process"
evidence=ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0008021 GO:GO:0003924 GO:GO:0007617
GO:GO:0040017 GO:GO:0007271 GO:GO:0006935 GO:GO:0043051
GO:GO:0006887 PROSITE:PS51419 eggNOG:COG1100 EMBL:FO080599
KO:K07976 HOGENOM:HOG000233968 GeneTree:ENSGT00690000101942
EMBL:U68265 EMBL:U68266 EMBL:AB112928 RefSeq:NP_001021974.1
UniGene:Cel.19709 ProteinModelPortal:Q94986 SMR:Q94986
STRING:Q94986 PaxDb:Q94986 PRIDE:Q94986 EnsemblMetazoa:C18A3.6b.1
EnsemblMetazoa:C18A3.6b.2 GeneID:173971 KEGG:cel:CELE_C18A3.6
UCSC:C18A3.6a CTD:173971 WormBase:C18A3.6b NextBio:881917
ArrayExpress:Q94986 Uniprot:Q94986
Length = 219
Score = 282 (104.3 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 51/118 (43%), Positives = 82/118 (69%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F +T+G+DF +KTV ++R+KLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 76
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW +I+ Y+ VLVG
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVG 134
Score = 79 (32.9 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 202 NKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D + +R + + G A + + + ETSAK + NV+ +F ++ + +K+AE L
Sbjct: 135 NKCDMDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEIICDKMAESL 191
>UNIPROTKB|Q95QV3 [details] [associations]
symbol:rab-3 "Protein RAB-3, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006184 "GTP catabolic process"
evidence=ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 GO:GO:0003924 GO:GO:0007617 GO:GO:0040017
GO:GO:0007271 GO:GO:0006935 GO:GO:0043051 EMBL:FO080599 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 GeneTree:ENSGT00690000101942
OMA:QLTEQPA UniGene:Cel.19709 GeneID:173971 KEGG:cel:CELE_C18A3.6
UCSC:C18A3.6a CTD:173971 NextBio:881917 RefSeq:NP_001021973.1
ProteinModelPortal:Q95QV3 SMR:Q95QV3 STRING:Q95QV3 PRIDE:Q95QV3
EnsemblMetazoa:C18A3.6a WormBase:C18A3.6a InParanoid:Q95QV3
ArrayExpress:Q95QV3 Uniprot:Q95QV3
Length = 233
Score = 282 (104.3 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 51/118 (43%), Positives = 82/118 (69%)
Query: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIW 61
+++ ++FK++++GN+ VGKT + R+ F +T+G+DF +KTV ++R+KLQIW
Sbjct: 31 QNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 90
Query: 62 DTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
DTAGQER+R+IT +YYR A IL+YDI+ + +F+ + DW +I+ Y+ VLVG
Sbjct: 91 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVG 148
Score = 79 (32.9 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 202 NKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKLAEKL 257
NK D + +R + + G A + + + ETSAK + NV+ +F ++ + +K+AE L
Sbjct: 149 NKCDMDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEIICDKMAESL 205
>DICTYBASE|DDB_G0280043 [details] [associations]
symbol:rab8A "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0033298 "contractile vacuole
organization" evidence=IGI] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0000331 "contractile vacuole"
evidence=IDA] [GO:0050708 "regulation of protein secretion"
evidence=IMP] [GO:0031157 "regulation of aggregate size involved in
sorocarp development" evidence=IMP] [GO:0030036 "actin cytoskeleton
organization" evidence=IMP] [GO:0016339 "calcium-dependent
cell-cell adhesion" evidence=IMP] [GO:0005525 "GTP binding"
evidence=IEA;ISS] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0280043 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GenomeReviews:CM000152_GR GO:GO:0030036 GO:GO:0015031
EMBL:AAFI02000035 GO:GO:0000331 PROSITE:PS51419 GO:GO:0016339
GO:GO:0050708 GO:GO:0031157 eggNOG:COG1100 GO:GO:0033298 KO:K07976
EMBL:M34457 PIR:A34716 RefSeq:XP_641380.1 ProteinModelPortal:P20790
SMR:P20790 MINT:MINT-6947856 STRING:P20790 PRIDE:P20790
EnsemblProtists:DDB0214885 GeneID:8622514 KEGG:ddi:DDB_G0280043
OMA:TSFFRCL ProtClustDB:CLSZ2430646 Uniprot:P20790
Length = 208
Score = 335 (123.0 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 63/156 (40%), Positives = 103/156 (66%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +L K++L+G++GVGK+CL+ RF++ F P TIG+DF I+T+E+ +RIKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDT 71
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVGGTSG 123
AGQERFR+IT +YYR A ++LVYD++ + +F + +W+R IE++A+ V ++L+G
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCD 131
Query: 124 LKIVNEMASAAGLLCTVDPALATALASDKTDLDEDE 159
+ + S+ G + + S K ++ +E
Sbjct: 132 MAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEE 167
>UNIPROTKB|Q29RR0 [details] [associations]
symbol:RAB26 "Ras-related protein Rab-26" species:9913 "Bos
taurus" [GO:0017157 "regulation of exocytosis" evidence=ISS]
[GO:0031226 "intrinsic to plasma membrane" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0035272 "exocrine
system development" evidence=ISS] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0031226 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 HOGENOM:HOG000233968 GeneTree:ENSGT00700000104031
EMBL:BC114066 IPI:IPI00702165 RefSeq:NP_001039674.1
UniGene:Bt.13735 ProteinModelPortal:Q29RR0 SMR:Q29RR0 PRIDE:Q29RR0
Ensembl:ENSBTAT00000000348 GeneID:515675 KEGG:bta:515675 CTD:25837
InParanoid:Q29RR0 KO:K07913 OMA:PSEPRFR OrthoDB:EOG4VMFG9
NextBio:20871955 GO:GO:0035272 Uniprot:Q29RR0
Length = 256
Score = 335 (123.0 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 62/117 (52%), Positives = 88/117 (75%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQG-ATIGVDFMIKTVEINNERIKLQIWD 62
Y FKV+LVG++GVGKTCL+ RF G F G +T+G+DF K V+++ ++KLQIWD
Sbjct: 60 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVVDVDGMKVKLQIWD 119
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
TAGQERFRS+T +YYR AHAL+L+YD++ + +FD + WL EI+E+A V+ +L+G
Sbjct: 120 TAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEHAQDDVVLMLLG 176
>WB|WBGene00004273 [details] [associations]
symbol:rab-10 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0032940
"secretion by cell" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0006412
"translation" evidence=IMP] [GO:0043652 "engulfment of apoptotic
cell" evidence=IMP] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0005769 "early
endosome" evidence=IDA] [GO:0032456 "endocytic recycling"
evidence=IMP] [GO:0001881 "receptor recycling" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055037 "recycling
endosome" evidence=IDA] [GO:0005797 "Golgi medial cisterna"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0031045
"dense core granule" evidence=IDA] [GO:0030424 "axon" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0008340 GO:GO:0009792 GO:GO:0002009
GO:GO:0006898 GO:GO:0040007 GO:GO:0007264 GO:GO:0002119
GO:GO:0032940 GO:GO:0006412 GO:GO:0015031 GO:GO:0030424
GO:GO:0043025 GO:GO:0040018 GO:GO:0055037 GO:GO:0040035
GO:GO:0005769 GO:GO:0001881 GO:GO:0032456 GO:GO:0040002
GO:GO:0043652 GO:GO:0005797 GO:GO:0031045 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 GeneTree:ENSGT00700000104031
EMBL:FO081319 PIR:T28971 RefSeq:NP_491857.1
ProteinModelPortal:Q94148 SMR:Q94148 STRING:Q94148
EnsemblMetazoa:T23H2.5.1 EnsemblMetazoa:T23H2.5.2
EnsemblMetazoa:T23H2.5.3 GeneID:266836 KEGG:cel:CELE_T23H2.5
UCSC:T23H2.5.1 CTD:266836 WormBase:T23H2.5 InParanoid:Q94148
OMA:HETSAKL NextBio:953212 ArrayExpress:Q94148 Uniprot:Q94148
Length = 201
Score = 334 (122.6 bits), Expect = 2.2e-29, P = 2.2e-29
Identities = 61/116 (52%), Positives = 88/116 (75%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y LFK++L+G++GVGKTC++ RF+ F +TIG+DF IKT+E+ ++IKLQIWDT
Sbjct: 6 YDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDT 65
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERF +IT SYYR A ++LVYDI+ +FD + WLR I+E+AS V+++++G
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILG 121
>FB|FBgn0029959 [details] [associations]
symbol:Rab39 "Rab39" species:7227 "Drosophila melanogaster"
[GO:0005525 "GTP binding" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0003924
eggNOG:COG1100 HSSP:P20339 EMBL:AY071340 ProteinModelPortal:Q8SYS5
SMR:Q8SYS5 PaxDb:Q8SYS5 PRIDE:Q8SYS5 FlyBase:FBgn0029959
InParanoid:Q8SYS5 OrthoDB:EOG43XSKF ArrayExpress:Q8SYS5 Bgee:Q8SYS5
Uniprot:Q8SYS5
Length = 218
Score = 259 (96.2 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 50/118 (42%), Positives = 82/118 (69%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINN-ERIKLQIWD 62
+++ F+++L+G++ VGK+ L++ FT G F T+GVDF + +E+ + +IKLQ+WD
Sbjct: 6 FEYQFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDGTQIKLQLWD 65
Query: 63 TAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYAS-FKVLRVLVG 119
TAGQERFRSIT+SYYR++ ++LVYDIS +F+ + W+ E + + + + LVG
Sbjct: 66 TAGQERFRSITKSYYRNSVGVLLVYDISNHASFEHIPLWMMEAQRHIEPHRSVFALVG 123
Score = 101 (40.6 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 209 REIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAAELMEKL 253
RE+ TE + FAK+H ++++ETSA++ NVE+ F + E+ ++
Sbjct: 135 REVTTEEAQKFAKQHGLHFVETSARSGANVEEAFRMVTQEVYARI 179
>ZFIN|ZDB-GENE-061215-104 [details] [associations]
symbol:rab39b "RAB39B, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-061215-104 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 OrthoDB:EOG43JC5J CTD:116442
EMBL:AL954129 EMBL:BC128658 IPI:IPI00503702 RefSeq:NP_001073492.1
UniGene:Dr.108453 Ensembl:ENSDART00000101406 GeneID:566010
KEGG:dre:566010 InParanoid:A1A5H9 OMA:NDESECL NextBio:20887972
Uniprot:A1A5H9
Length = 213
Score = 277 (102.6 bits), Expect = 2.6e-29, Sum P(2) = 2.6e-29
Identities = 53/116 (45%), Positives = 83/116 (71%)
Query: 6 FLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEIN-NERIKLQIWDTA 64
+ F+++++G++ VGK+CL+RRFT+G F T+GVDF + VEI +RIKLQIWDTA
Sbjct: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTA 66
Query: 65 GQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYAS-FKVLRVLVG 119
GQERFRSIT++YYR++ +L++DI+ + +F + +WL E + ++ +LVG
Sbjct: 67 GQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEARSHVQPHSIVFLLVG 122
Score = 82 (33.9 bits), Expect = 2.6e-29, Sum P(2) = 2.6e-29
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 189 LEGHSNNIHCMARNKIDRE-DREIPTEVGEDFAKRHDMYYLETSAKASDNVEKLFMQIAA 247
++ HS + + +K D E R++ + E A + M Y+ETSA+ + NVE+ F ++
Sbjct: 111 VQPHSI-VFLLVGHKCDLEPQRQVSQQEAEKLAAAYGMRYVETSARDAINVERAFTELTR 169
Query: 248 ELME 251
++ E
Sbjct: 170 DIFE 173
>UNIPROTKB|Q5F470 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=ISS] [GO:0017137 "Rab GTPase
binding" evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0055037 GO:GO:0007409
PROSITE:PS51419 GO:GO:0005932 GO:GO:0017137 eggNOG:COG1100
GO:GO:0019003 GO:GO:0031513 GO:GO:0006904 HOVERGEN:HBG009351
GO:GO:0048210 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 HSSP:P55258
GeneTree:ENSGT00700000104031 CTD:4218 KO:K07901 OMA:CDANDKR
EMBL:AJ851430 IPI:IPI00591966 RefSeq:NP_001026675.1
UniGene:Gga.16249 ProteinModelPortal:Q5F470 SMR:Q5F470 PRIDE:Q5F470
Ensembl:ENSGALT00000006368 GeneID:428352 KEGG:gga:428352
InParanoid:Q5F470 NextBio:20829370 Uniprot:Q5F470
Length = 207
Score = 333 (122.3 bits), Expect = 2.8e-29, P = 2.8e-29
Identities = 60/116 (51%), Positives = 92/116 (79%)
Query: 4 YKFLFKVVLVGNAGVGKTCLVRRFTQGVFPPGQGATIGVDFMIKTVEINNERIKLQIWDT 63
Y +LFK++L+G++GVGKTC + RF++ F +TIG+DF I+T+E++ +RIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLTDWLREIEEYASFKVLRVLVG 119
AGQERFR+IT +YYR A ++LVYDI+ + +F+ + +W+R IEE+AS V ++++G
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILG 120
WARNING: HSPs involving 1424 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.135 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 730 700 0.00082 121 3 11 22 0.48 33
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1674
No. of states in DFA: 620 (66 KB)
Total size of DFA: 358 KB (2178 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 61.53u 0.08s 61.61t Elapsed: 00:00:45
Total cpu time: 61.56u 0.09s 61.65t Elapsed: 00:00:47
Start: Thu Aug 15 13:19:04 2013 End: Thu Aug 15 13:19:51 2013
WARNINGS ISSUED: 2