BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1747
(68 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8Y7I3|MIAA_LISMO tRNA dimethylallyltransferase OS=Listeria monocytogenes serovar
1/2a (strain ATCC BAA-679 / EGD-e) GN=miaA PE=3 SV=1
Length = 305
Score = 57.0 bits (136), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
MSK+P+ VI+G T GK+ L IE+AKK +GEIIS DSMQ
Sbjct: 1 MSKIPVIVIVGPTAVGKTSLSIELAKKLDGEIISGDSMQ 39
>sp|Q720C8|MIAA_LISMF tRNA dimethylallyltransferase OS=Listeria monocytogenes serotype
4b (strain F2365) GN=miaA PE=3 SV=1
Length = 305
Score = 56.6 bits (135), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
MSK+P+ VI+G T GK+ L IE+AKK +GEIIS DSMQ
Sbjct: 1 MSKIPVIVIVGPTAVGKTSLSIELAKKLDGEIISGDSMQ 39
>sp|C1L2K1|MIAA_LISMC tRNA dimethylallyltransferase OS=Listeria monocytogenes serotype
4b (strain CLIP80459) GN=miaA PE=3 SV=1
Length = 305
Score = 56.6 bits (135), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
MSK+P+ VI+G T GK+ L IE+AKK +GEIIS DSMQ
Sbjct: 1 MSKIPVIVIVGPTAVGKTSLSIELAKKLDGEIISGDSMQ 39
>sp|A0AI95|MIAA_LISW6 tRNA dimethylallyltransferase OS=Listeria welshimeri serovar 6b
(strain ATCC 35897 / DSM 20650 / SLCC5334) GN=miaA PE=3
SV=1
Length = 305
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
MSK+P+ VI+G T GK+ L IE+AKK +GEIIS DSMQ
Sbjct: 1 MSKIPVIVIVGPTAVGKTSLSIELAKKLDGEIISGDSMQ 39
>sp|B8DG34|MIAA_LISMH tRNA dimethylallyltransferase OS=Listeria monocytogenes serotype
4a (strain HCC23) GN=miaA PE=3 SV=1
Length = 305
Score = 55.5 bits (132), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
MSK+P+ VI+G T GK+ L IE+AK+ +GEIIS DSMQ
Sbjct: 1 MSKIPVIVIVGPTAVGKTSLSIELAKRLDGEIISGDSMQ 39
>sp|B1YMH0|MIAA_EXIS2 tRNA dimethylallyltransferase OS=Exiguobacterium sibiricum
(strain DSM 17290 / JCM 13490 / 255-15) GN=miaA PE=3
SV=1
Length = 312
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 32/42 (76%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQGLK 51
+SK P+ VI+G T GK+K GIE+AKK NGEIIS DS+Q K
Sbjct: 3 LSKQPVIVIVGPTAVGKTKTGIELAKKLNGEIISGDSVQVYK 44
>sp|Q92C59|MIAA_LISIN tRNA dimethylallyltransferase OS=Listeria innocua serovar 6a
(strain CLIP 11262) GN=miaA PE=3 SV=1
Length = 305
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/39 (61%), Positives = 30/39 (76%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
MSK+P+ VI+G T GK+ L I +AK F+GEIIS DSMQ
Sbjct: 1 MSKIPVIVIVGPTAVGKTSLSITLAKNFDGEIISGDSMQ 39
>sp|C4L1B9|MIAA_EXISA tRNA dimethylallyltransferase OS=Exiguobacterium sp. (strain ATCC
BAA-1283 / AT1b) GN=miaA PE=3 SV=1
Length = 311
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 30/39 (76%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
M K P+ VI+G T GK+K GIE+AK F+GEI+S DS+Q
Sbjct: 1 MKKTPVVVIVGPTAVGKTKTGIELAKAFDGEIVSGDSVQ 39
>sp|Q8R5S5|MIAA_THETN tRNA dimethylallyltransferase OS=Thermoanaerobacter tengcongensis
(strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
GN=miaA PE=3 SV=1
Length = 315
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 34/41 (82%)
Query: 13 VPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQGLKFL 53
+ I +I+G T TGKS+L +++AK+FNGE++SADSMQ K++
Sbjct: 3 IQIVLIVGPTATGKSRLAVDVAKRFNGEVVSADSMQIYKYM 43
>sp|B0K1A4|MIAA_THEPX tRNA dimethylallyltransferase OS=Thermoanaerobacter sp. (strain
X514) GN=miaA PE=3 SV=1
Length = 315
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/41 (58%), Positives = 34/41 (82%)
Query: 13 VPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQGLKFL 53
+ I +I+G T +GKSKL +++AK+FNGEIISADSMQ K++
Sbjct: 3 IQIVLIVGPTASGKSKLAVDVAKEFNGEIISADSMQVYKYM 43
>sp|B0K9L7|MIAA_THEP3 tRNA dimethylallyltransferase OS=Thermoanaerobacter
pseudethanolicus (strain ATCC 33223 / 39E) GN=miaA PE=3
SV=1
Length = 315
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/41 (58%), Positives = 34/41 (82%)
Query: 13 VPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQGLKFL 53
+ I +I+G T +GKSKL +++AK+FNGEIISADSMQ K++
Sbjct: 3 IQIVLIVGPTASGKSKLAVDVAKEFNGEIISADSMQVYKYM 43
>sp|B5XL33|MIAA_STRPZ tRNA dimethylallyltransferase OS=Streptococcus pyogenes serotype
M49 (strain NZ131) GN=miaA PE=3 SV=1
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
M+K+ I VI+G T GK+ LGI +AK FNGEIIS DS Q
Sbjct: 1 MTKIKIVVIVGPTAVGKTALGISLAKAFNGEIISGDSQQ 39
>sp|P0DC33|MIAA_STRPQ tRNA dimethylallyltransferase OS=Streptococcus pyogenes serotype
M3 (strain SSI-1) GN=miaA PE=3 SV=1
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
M+K+ I VI+G T GK+ LGI +AK FNGEIIS DS Q
Sbjct: 1 MTKIKIVVIVGPTAVGKTALGISLAKAFNGEIISGDSQQ 39
>sp|Q48TZ1|MIAA_STRPM tRNA dimethylallyltransferase OS=Streptococcus pyogenes serotype
M28 (strain MGAS6180) GN=miaA PE=3 SV=1
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
M+K+ I VI+G T GK+ LGI +AK FNGEIIS DS Q
Sbjct: 1 MTKIKIVVIVGPTAVGKTALGISLAKAFNGEIISGDSQQ 39
>sp|A2REY5|MIAA_STRPG tRNA dimethylallyltransferase OS=Streptococcus pyogenes serotype
M5 (strain Manfredo) GN=miaA PE=3 SV=1
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
M+K+ I VI+G T GK+ LGI +AK FNGEIIS DS Q
Sbjct: 1 MTKIKIVVIVGPTAVGKTALGISLAKAFNGEIISGDSQQ 39
>sp|Q1JH90|MIAA_STRPD tRNA dimethylallyltransferase OS=Streptococcus pyogenes serotype
M2 (strain MGAS10270) GN=miaA PE=3 SV=1
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
M+K+ I VI+G T GK+ LGI +AK FNGEIIS DS Q
Sbjct: 1 MTKIKIVVIVGPTAVGKTALGISLAKAFNGEIISGDSQQ 39
>sp|Q1JM45|MIAA_STRPC tRNA dimethylallyltransferase OS=Streptococcus pyogenes serotype
M12 (strain MGAS9429) GN=miaA PE=3 SV=1
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
M+K+ I VI+G T GK+ LGI +AK FNGEIIS DS Q
Sbjct: 1 MTKIKIVVIVGPTAVGKTALGISLAKAFNGEIISGDSQQ 39
>sp|Q1JC62|MIAA_STRPB tRNA dimethylallyltransferase OS=Streptococcus pyogenes serotype
M12 (strain MGAS2096) GN=miaA PE=3 SV=1
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
M+K+ I VI+G T GK+ LGI +AK FNGEIIS DS Q
Sbjct: 1 MTKIKIVVIVGPTAVGKTALGISLAKAFNGEIISGDSQQ 39
>sp|P65358|MIAA_STRP8 tRNA dimethylallyltransferase OS=Streptococcus pyogenes serotype
M18 (strain MGAS8232) GN=miaA PE=3 SV=1
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
M+K+ I VI+G T GK+ LGI +AK FNGEIIS DS Q
Sbjct: 1 MTKIKIVVIVGPTAVGKTALGISLAKAFNGEIISGDSQQ 39
>sp|P0DC32|MIAA_STRP3 tRNA dimethylallyltransferase OS=Streptococcus pyogenes serotype
M3 (strain ATCC BAA-595 / MGAS315) GN=miaA PE=3 SV=1
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
M+K+ I VI+G T GK+ LGI +AK FNGEIIS DS Q
Sbjct: 1 MTKIKIVVIVGPTAVGKTALGISLAKAFNGEIISGDSQQ 39
>sp|Q9A059|MIAA_STRP1 tRNA dimethylallyltransferase OS=Streptococcus pyogenes serotype
M1 GN=miaA PE=3 SV=1
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
M+K+ I VI+G T GK+ LGI +AK FNGEIIS DS Q
Sbjct: 1 MTKIKIVVIVGPTAVGKTALGISLAKAFNGEIISGDSQQ 39
>sp|Q1J708|MIAA_STRPF tRNA dimethylallyltransferase OS=Streptococcus pyogenes serotype
M4 (strain MGAS10750) GN=miaA PE=3 SV=1
Length = 299
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
M+K+ I VI+G T GK+ LGI +AK FNGEIIS DS Q
Sbjct: 1 MTKIKIVVIVGPTAVGKTALGISLAKAFNGEIISGDSQQ 39
>sp|A3DDI1|MIAA_CLOTH tRNA dimethylallyltransferase OS=Clostridium thermocellum (strain
ATCC 27405 / DSM 1237) GN=miaA PE=3 SV=1
Length = 313
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/39 (64%), Positives = 32/39 (82%)
Query: 15 IFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQGLKFL 53
+ VI+G T +GK+KL IEIAK+ NGEIISADSMQ K++
Sbjct: 4 VLVIIGPTASGKTKLAIEIAKRANGEIISADSMQIYKYM 42
>sp|Q8CQL3|MIAA_STAES tRNA dimethylallyltransferase OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=miaA PE=1 SV=1
Length = 332
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/39 (64%), Positives = 32/39 (82%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
M+K + VI+G T +GK++L IE+AKKFNGEIIS DSMQ
Sbjct: 4 MTKPFLIVIVGPTASGKTELSIEVAKKFNGEIISGDSMQ 42
>sp|Q5HPN8|MIAA_STAEQ tRNA dimethylallyltransferase OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=miaA PE=3 SV=1
Length = 332
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/39 (64%), Positives = 32/39 (82%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
M+K + VI+G T +GK++L IE+AKKFNGEIIS DSMQ
Sbjct: 4 MTKPFLIVIVGPTASGKTELSIEVAKKFNGEIISGDSMQ 42
>sp|B9EBJ1|MIAA_MACCJ tRNA dimethylallyltransferase OS=Macrococcus caseolyticus (strain
JCSC5402) GN=miaA PE=3 SV=1
Length = 312
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 30/39 (76%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
M+K+P+ VI+G T GK+ L IEIAK NGEIIS D++Q
Sbjct: 1 MNKIPLIVIVGPTAVGKTALSIEIAKAVNGEIISGDAIQ 39
>sp|P07884|MOD5_YEAST tRNA dimethylallyltransferase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MOD5 PE=1
SV=2
Length = 428
Score = 52.8 bits (125), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 34/42 (80%), Gaps = 1/42 (2%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQGLK 51
MSK + VI G+TG GKS+L I++A+KFNGE+I++DSMQ K
Sbjct: 12 MSK-KVIVIAGTTGVGKSQLSIQLAQKFNGEVINSDSMQVYK 52
>sp|Q9H3H1|MOD5_HUMAN tRNA dimethylallyltransferase, mitochondrial OS=Homo sapiens
GN=TRIT1 PE=1 SV=1
Length = 467
Score = 52.8 bits (125), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 4 SFLKVVMSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
S L+ + +P+ VILG+TGTGKS L +++ ++ GEI+SADSMQ
Sbjct: 14 SGLRGLQRTLPLVVILGATGTGKSTLALQLGQRLGGEIVSADSMQ 58
>sp|Q80UN9|MOD5_MOUSE tRNA dimethylallyltransferase, mitochondrial OS=Mus musculus
GN=Trit1 PE=2 SV=2
Length = 467
Score = 52.4 bits (124), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 34/46 (73%)
Query: 3 SSFLKVVMSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
SS + + +P+ VILG+TGTGKS L +++ ++ GEI+SADSMQ
Sbjct: 13 SSGFRGLRRTLPLVVILGATGTGKSTLALQLGQRLGGEIVSADSMQ 58
>sp|A8FDI9|MIAA_BACP2 tRNA dimethylallyltransferase OS=Bacillus pumilus (strain
SAFR-032) GN=miaA PE=3 SV=2
Length = 318
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 11 SKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
+K P+ V++G T GK+KL I IAK +NGEIIS DSMQ
Sbjct: 4 TKQPVIVLVGPTAVGKTKLSIHIAKAYNGEIISGDSMQ 41
>sp|Q5XCI0|MIAA_STRP6 tRNA dimethylallyltransferase OS=Streptococcus pyogenes serotype
M6 (strain ATCC BAA-946 / MGAS10394) GN=miaA PE=3 SV=1
Length = 299
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 28/39 (71%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
M+K+ I VI+G T GK+ LGI +AK NGEIIS DS Q
Sbjct: 1 MTKIKIVVIVGPTAVGKTALGISLAKALNGEIISGDSQQ 39
>sp|Q5WFY6|MIAA_BACSK tRNA dimethylallyltransferase OS=Bacillus clausii (strain
KSM-K16) GN=miaA PE=3 SV=1
Length = 310
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 28/39 (71%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
M++ P+ I+G T GK+ LGIE+AK F EIIS DSMQ
Sbjct: 1 MTQEPLIAIVGPTAVGKTALGIELAKTFGAEIISGDSMQ 39
>sp|Q9C5J6|IPT9_ARATH tRNA dimethylallyltransferase 9 OS=Arabidopsis thaliana GN=IPT9
PE=2 SV=1
Length = 463
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/39 (61%), Positives = 30/39 (76%)
Query: 15 IFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQGLKFL 53
+ VI G TG GKS+L +E+AK+ NGEIISADS+Q K L
Sbjct: 52 VIVISGPTGAGKSRLAMELAKRLNGEIISADSVQVYKGL 90
>sp|Q3ACA8|MIAA_CARHZ tRNA dimethylallyltransferase OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=miaA
PE=3 SV=1
Length = 311
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 30/39 (76%)
Query: 15 IFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQGLKFL 53
+ +I+G T GKS LGI++AKK NGEIIS DSMQ K++
Sbjct: 5 LIIIVGPTAVGKSALGIKVAKKINGEIISGDSMQVYKYM 43
>sp|C1CQE9|MIAA_STRZT tRNA dimethylallyltransferase OS=Streptococcus pneumoniae (strain
Taiwan19F-14) GN=miaA PE=3 SV=1
Length = 294
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 12 KVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
K I VI+G T GK+ L IE+AK+FNGE++S DS Q
Sbjct: 2 KTKIIVIVGPTAVGKTALAIEVAKRFNGEVVSGDSQQ 38
>sp|Q8CWS7|MIAA_STRR6 tRNA dimethylallyltransferase OS=Streptococcus pneumoniae (strain
ATCC BAA-255 / R6) GN=miaA PE=3 SV=2
Length = 294
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 12 KVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
K I VI+G T GK+ L IE+AK+FNGE++S DS Q
Sbjct: 2 KTKIIVIVGPTAVGKTALAIEVAKRFNGEVVSGDSQQ 38
>sp|B2IMY5|MIAA_STRPS tRNA dimethylallyltransferase OS=Streptococcus pneumoniae (strain
CGSP14) GN=miaA PE=3 SV=2
Length = 294
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 12 KVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
K I VI+G T GK+ L IE+AK+FNGE++S DS Q
Sbjct: 2 KTKIIVIVGPTAVGKTALAIEVAKRFNGEVVSGDSQQ 38
>sp|Q97RW5|MIAA_STRPN tRNA dimethylallyltransferase OS=Streptococcus pneumoniae
serotype 4 (strain ATCC BAA-334 / TIGR4) GN=miaA PE=3
SV=1
Length = 294
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 12 KVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
K I VI+G T GK+ L IE+AK+FNGE++S DS Q
Sbjct: 2 KTKIIVIVGPTAVGKTALAIEVAKRFNGEVVSGDSQQ 38
>sp|B8ZMQ3|MIAA_STRPJ tRNA dimethylallyltransferase OS=Streptococcus pneumoniae (strain
ATCC 700669 / Spain 23F-1) GN=miaA PE=3 SV=1
Length = 294
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 12 KVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
K I VI+G T GK+ L IE+AK+FNGE++S DS Q
Sbjct: 2 KTKIIVIVGPTAVGKTALAIEVAKRFNGEVVSGDSQQ 38
>sp|B1IAK9|MIAA_STRPI tRNA dimethylallyltransferase OS=Streptococcus pneumoniae (strain
Hungary19A-6) GN=miaA PE=3 SV=1
Length = 294
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 12 KVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
K I VI+G T GK+ L IE+AK+FNGE++S DS Q
Sbjct: 2 KTKIIVIVGPTAVGKTALAIEVAKRFNGEVVSGDSQQ 38
>sp|B5E2R3|MIAA_STRP4 tRNA dimethylallyltransferase OS=Streptococcus pneumoniae
serotype 19F (strain G54) GN=miaA PE=3 SV=1
Length = 294
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 12 KVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
K I VI+G T GK+ L IE+AK+FNGE++S DS Q
Sbjct: 2 KTKIIVIVGPTAVGKTALAIEVAKRFNGEVVSGDSQQ 38
>sp|Q04LL6|MIAA_STRP2 tRNA dimethylallyltransferase OS=Streptococcus pneumoniae
serotype 2 (strain D39 / NCTC 7466) GN=miaA PE=3 SV=1
Length = 294
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 12 KVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
K I VI+G T GK+ L IE+AK+FNGE++S DS Q
Sbjct: 2 KTKIIVIVGPTAVGKTALAIEVAKRFNGEVVSGDSQQ 38
>sp|Q3K0P1|MIAA_STRA1 tRNA dimethylallyltransferase OS=Streptococcus agalactiae
serotype Ia (strain ATCC 27591 / A909 / CDC SS700)
GN=miaA PE=3 SV=1
Length = 296
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 28/39 (71%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
M K+ + ++G T GK+ LGIE+AK FNGEIIS DS Q
Sbjct: 1 MRKIKLIAVVGPTAVGKTALGIELAKTFNGEIISGDSQQ 39
>sp|Q8E4V8|MIAA_STRA3 tRNA dimethylallyltransferase OS=Streptococcus agalactiae
serotype III (strain NEM316) GN=miaA PE=3 SV=1
Length = 296
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 28/39 (71%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
M K+ + ++G T GK+ LGIE+AK FNGEIIS DS Q
Sbjct: 1 MRKIKLIAVVGPTAVGKTALGIELAKTFNGEIISGDSQQ 39
>sp|Q8CX09|MIAA_STRA5 tRNA dimethylallyltransferase OS=Streptococcus agalactiae
serotype V (strain ATCC BAA-611 / 2603 V/R) GN=miaA
PE=3 SV=1
Length = 296
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 28/39 (71%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
M K+ + ++G T GK+ LGIE+AK FNGEIIS DS Q
Sbjct: 1 MRKIKLIAVVGPTAVGKTALGIELAKTFNGEIISGDSQQ 39
>sp|A3CNS2|MIAA_STRSV tRNA dimethylallyltransferase OS=Streptococcus sanguinis (strain
SK36) GN=miaA PE=3 SV=1
Length = 294
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 12 KVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
K I VI+G T GK+ L IE+AK+FNG+IIS DS Q
Sbjct: 2 KTKIIVIVGPTAVGKTALSIEVAKRFNGQIISGDSQQ 38
>sp|B3QNZ0|MIAA_CHLP8 tRNA dimethylallyltransferase OS=Chlorobaculum parvum (strain
NCIB 8327) GN=miaA PE=3 SV=1
Length = 313
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 10 MSKVPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
MS+ P+ VILG T +GK++L IA+K GEIISADS Q
Sbjct: 1 MSQKPVLVILGPTASGKTELAFRIARKTGGEIISADSRQ 39
>sp|Q03G75|MIAA_PEDPA tRNA dimethylallyltransferase OS=Pediococcus pentosaceus (strain
ATCC 25745 / 183-1w) GN=miaA PE=3 SV=1
Length = 310
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 15 IFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQ 48
+ I+G T GK+ L I+IAKKFNGEIIS DSMQ
Sbjct: 4 VLAIVGPTAVGKTNLSIDIAKKFNGEIISGDSMQ 37
>sp|C1FNT7|MIAA_CLOBJ tRNA dimethylallyltransferase OS=Clostridium botulinum (strain
Kyoto / Type A2) GN=miaA PE=3 SV=1
Length = 311
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 13 VPIFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQGLKFL 53
+ + +I G T GK+ + IE+A+K NGEIISADSMQ K++
Sbjct: 2 IDLLIIAGPTAVGKTDISIELAEKLNGEIISADSMQIYKYM 42
>sp|P65356|MIAA_STAAW tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain
MW2) GN=miaA PE=3 SV=1
Length = 311
Score = 49.3 bits (116), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 30/39 (76%)
Query: 15 IFVILGSTGTGKSKLGIEIAKKFNGEIISADSMQGLKFL 53
I VI+G T +GK++L IE+AK+ NGEIIS DSMQ K +
Sbjct: 8 IVVIVGPTASGKTELSIELAKRINGEIISGDSMQVYKHM 46
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,077,834
Number of Sequences: 539616
Number of extensions: 709345
Number of successful extensions: 6658
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 6029
Number of HSP's gapped (non-prelim): 663
length of query: 68
length of database: 191,569,459
effective HSP length: 40
effective length of query: 28
effective length of database: 169,984,819
effective search space: 4759574932
effective search space used: 4759574932
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)