BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17474
(343 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5ZMW3|API5_CHICK Apoptosis inhibitor 5 OS=Gallus gallus GN=API5 PE=2 SV=1
Length = 523
Score = 210 bits (535), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/241 (43%), Positives = 163/241 (67%), Gaps = 5/241 (2%)
Query: 2 DQAIEALFDLCEDEDVSVRKQAIKDLPSLCKENNEYTPKVTDILGQLLQTNDTTELSVVQ 61
D AI A DLCEDEDVS+R+QAIK+LP +N P+V DIL QLLQ++D+ E ++V
Sbjct: 61 DSAINAQLDLCEDEDVSIRRQAIKELPQFATGDN--LPRVADILTQLLQSDDSAEFNLVN 118
Query: 62 SSIMTLCKNDIKGALKGMFNLIEISNGPVREKCLRFLVPKIKMLGRDIMTKEIEEYTIDQ 121
++++++ K D KG L G+F+ I VRE+ ++FL K+K L +++TKE+EE+ + +
Sbjct: 119 NALLSIFKMDAKGTLGGLFSQILQGEDIVRERAIKFLSTKLKTLPEEVLTKEVEEFILAE 178
Query: 122 CKKILRNVTGDEFMQIMDLLAWSRLSQSLAGQKELMEIIKHHAELSKSFDPSNPEDVDRS 181
KK+L +VTG+EF+ M +L+ + Q+++G+++L+E++ A+L ++F+PS+P+ VDR
Sbjct: 179 SKKVLEDVTGEEFVLFMKILSGLKSLQTVSGRQQLVELVAEQADLEQTFNPSDPDCVDRL 238
Query: 182 IYCSLHCVPYLCSAIPSTPFVSYLCEQVLPKLDQIPETKDEAGGLDNQLEALKLLAELSP 241
+ C+ VP + ST FV+Y CE VLP L + + GLD QLE LKLLAE+S
Sbjct: 239 LQCTRQAVPLFSKNVHSTKFVTYFCEHVLPNLSALTTPVE---GLDIQLEVLKLLAEMSS 295
Query: 242 F 242
F
Sbjct: 296 F 296
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 13/101 (12%)
Query: 225 GLDNQLEALKLLAELSPFYVVHEDTPQHITSIVDC---------LFVRKQAIKDLPSLCK 275
G+ + +L A+ P + H P+ S ++ + +R+QAIK+LP
Sbjct: 34 GVKGGAKEKRLAAQFIPKFFKH--FPELADSAINAQLDLCEDEDVSIRRQAIKELPQFAT 91
Query: 276 ENNEYTPKVTDILGQLLQTNDTTELSVVQSSIMTLCKNDIK 316
+N P+V DIL QLLQ++D+ E ++V ++++++ K D K
Sbjct: 92 GDN--LPRVADILTQLLQSDDSAEFNLVNNALLSIFKMDAK 130
>sp|Q5R644|API5_PONAB Apoptosis inhibitor 5 OS=Pongo abelii GN=API5 PE=2 SV=1
Length = 504
Score = 209 bits (533), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/241 (44%), Positives = 162/241 (67%), Gaps = 5/241 (2%)
Query: 2 DQAIEALFDLCEDEDVSVRKQAIKDLPSLCKENNEYTPKVTDILGQLLQTNDTTELSVVQ 61
D AI A DLCEDEDVS+R+QAIK+LP E P+V DIL QLLQT+D+ E ++V
Sbjct: 61 DSAINAQLDLCEDEDVSIRRQAIKELPQFA--TGENLPRVADILTQLLQTDDSAEFNLVN 118
Query: 62 SSIMTLCKNDIKGALKGMFNLIEISNGPVREKCLRFLVPKIKMLGRDIMTKEIEEYTIDQ 121
++++++ K D KG L G+F+ I VRE+ ++FL K+K L +++TKE+EE + +
Sbjct: 119 NALLSIFKMDAKGTLGGLFSQILQGEDIVRERAIKFLSTKLKTLPDEVLTKEVEELILTE 178
Query: 122 CKKILRNVTGDEFMQIMDLLAWSRLSQSLAGQKELMEIIKHHAELSKSFDPSNPEDVDRS 181
KK+L +VTG+EF+ M +L+ + Q+++G+++L+E++ A+L ++F+PS+P+ VDR
Sbjct: 179 SKKVLEDVTGEEFVLFMKILSGLKSLQTVSGRQQLVELVAEQADLEQTFNPSDPDCVDRL 238
Query: 182 IYCSLHCVPYLCSAIPSTPFVSYLCEQVLPKLDQIPETKDEAGGLDNQLEALKLLAELSP 241
+ C+ VP + ST FV+Y CEQVLP L + + GLD QLE LKLLAE+S
Sbjct: 239 LQCTRQAVPLFSKNVHSTRFVTYFCEQVLPNLGTLTTPVE---GLDIQLEVLKLLAEMSS 295
Query: 242 F 242
F
Sbjct: 296 F 296
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 13/101 (12%)
Query: 225 GLDNQLEALKLLAELSPFYVVHEDTPQHITSIVDC---------LFVRKQAIKDLPSLCK 275
G+ + +L A+ P + H P+ S ++ + +R+QAIK+LP
Sbjct: 34 GVKGGTKEKRLAAQFIPKFFKH--FPELADSAINAQLDLCEDEDVSIRRQAIKELPQFA- 90
Query: 276 ENNEYTPKVTDILGQLLQTNDTTELSVVQSSIMTLCKNDIK 316
E P+V DIL QLLQT+D+ E ++V ++++++ K D K
Sbjct: 91 -TGENLPRVADILTQLLQTDDSAEFNLVNNALLSIFKMDAK 130
>sp|Q9BZZ5|API5_HUMAN Apoptosis inhibitor 5 OS=Homo sapiens GN=API5 PE=1 SV=3
Length = 524
Score = 209 bits (533), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/241 (44%), Positives = 162/241 (67%), Gaps = 5/241 (2%)
Query: 2 DQAIEALFDLCEDEDVSVRKQAIKDLPSLCKENNEYTPKVTDILGQLLQTNDTTELSVVQ 61
D AI A DLCEDEDVS+R+QAIK+LP E P+V DIL QLLQT+D+ E ++V
Sbjct: 61 DSAINAQLDLCEDEDVSIRRQAIKELPQFA--TGENLPRVADILTQLLQTDDSAEFNLVN 118
Query: 62 SSIMTLCKNDIKGALKGMFNLIEISNGPVREKCLRFLVPKIKMLGRDIMTKEIEEYTIDQ 121
++++++ K D KG L G+F+ I VRE+ ++FL K+K L +++TKE+EE + +
Sbjct: 119 NALLSIFKMDAKGTLGGLFSQILQGEDIVRERAIKFLSTKLKTLPDEVLTKEVEELILTE 178
Query: 122 CKKILRNVTGDEFMQIMDLLAWSRLSQSLAGQKELMEIIKHHAELSKSFDPSNPEDVDRS 181
KK+L +VTG+EF+ M +L+ + Q+++G+++L+E++ A+L ++F+PS+P+ VDR
Sbjct: 179 SKKVLEDVTGEEFVLFMKILSGLKSLQTVSGRQQLVELVAEQADLEQTFNPSDPDCVDRL 238
Query: 182 IYCSLHCVPYLCSAIPSTPFVSYLCEQVLPKLDQIPETKDEAGGLDNQLEALKLLAELSP 241
+ C+ VP + ST FV+Y CEQVLP L + + GLD QLE LKLLAE+S
Sbjct: 239 LQCTRQAVPLFSKNVHSTRFVTYFCEQVLPNLGTLTTPVE---GLDIQLEVLKLLAEMSS 295
Query: 242 F 242
F
Sbjct: 296 F 296
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 13/101 (12%)
Query: 225 GLDNQLEALKLLAELSPFYVVHEDTPQHITSIVDC---------LFVRKQAIKDLPSLCK 275
G+ + +L A+ P + H P+ S ++ + +R+QAIK+LP
Sbjct: 34 GVKGGTKEKRLAAQFIPKFFKH--FPELADSAINAQLDLCEDEDVSIRRQAIKELPQFA- 90
Query: 276 ENNEYTPKVTDILGQLLQTNDTTELSVVQSSIMTLCKNDIK 316
E P+V DIL QLLQT+D+ E ++V ++++++ K D K
Sbjct: 91 -TGENLPRVADILTQLLQTDDSAEFNLVNNALLSIFKMDAK 130
>sp|O35841|API5_MOUSE Apoptosis inhibitor 5 OS=Mus musculus GN=Api5 PE=2 SV=2
Length = 504
Score = 209 bits (532), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/241 (44%), Positives = 161/241 (66%), Gaps = 5/241 (2%)
Query: 2 DQAIEALFDLCEDEDVSVRKQAIKDLPSLCKENNEYTPKVTDILGQLLQTNDTTELSVVQ 61
D AI A DLCEDEDVS+R+QAIK+LP E P+V DIL QLLQT+D+ E ++V
Sbjct: 61 DSAINAQLDLCEDEDVSIRRQAIKELPQFA--TGENLPRVADILTQLLQTDDSAEFNLVN 118
Query: 62 SSIMTLCKNDIKGALKGMFNLIEISNGPVREKCLRFLVPKIKMLGRDIMTKEIEEYTIDQ 121
++++++ K D KG L G+F+ I VRE+ ++FL K+K L +++TKE+EE + +
Sbjct: 119 NALLSIFKMDAKGTLGGLFSQILQGEDIVRERAIKFLSTKLKTLPDEVLTKEVEELILTE 178
Query: 122 CKKILRNVTGDEFMQIMDLLAWSRLSQSLAGQKELMEIIKHHAELSKSFDPSNPEDVDRS 181
KK+L +VTG+EF+ M +L+ + Q+++G+++L+E++ A+L ++F PS+P+ VDR
Sbjct: 179 SKKVLEDVTGEEFVLFMKILSGLKSLQTVSGRQQLVELVAEQADLEQAFSPSDPDCVDRL 238
Query: 182 IYCSLHCVPYLCSAIPSTPFVSYLCEQVLPKLDQIPETKDEAGGLDNQLEALKLLAELSP 241
+ C+ VP + ST FV+Y CEQVLP L + + GLD QLE LKLLAE+S
Sbjct: 239 LQCTRQAVPLFSKNVHSTRFVTYFCEQVLPNLSTLTTPVE---GLDIQLEVLKLLAEMSS 295
Query: 242 F 242
F
Sbjct: 296 F 296
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 13/101 (12%)
Query: 225 GLDNQLEALKLLAELSPFYVVHEDTPQHITSIVDC---------LFVRKQAIKDLPSLCK 275
G+ + +L A+ P + H P+ S ++ + +R+QAIK+LP
Sbjct: 34 GVKGGTKEKRLAAQFIPKFFKH--FPELADSAINAQLDLCEDEDVSIRRQAIKELPQFA- 90
Query: 276 ENNEYTPKVTDILGQLLQTNDTTELSVVQSSIMTLCKNDIK 316
E P+V DIL QLLQT+D+ E ++V ++++++ K D K
Sbjct: 91 -TGENLPRVADILTQLLQTDDSAEFNLVNNALLSIFKMDAK 130
>sp|Q7ZY79|API5B_XENLA Apoptosis inhibitor 5-B OS=Xenopus laevis GN=api5-b PE=2 SV=1
Length = 523
Score = 202 bits (513), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 102/241 (42%), Positives = 158/241 (65%), Gaps = 5/241 (2%)
Query: 2 DQAIEALFDLCEDEDVSVRKQAIKDLPSLCKENNEYTPKVTDILGQLLQTNDTTELSVVQ 61
D A+ A DLCEDEDVS+R+QAIK+L E P+V DIL QLLQ++D+ E ++V
Sbjct: 61 DAALNAQLDLCEDEDVSIRRQAIKELSQFA--TGENLPRVADILTQLLQSDDSAEFNLVN 118
Query: 62 SSIMTLCKNDIKGALKGMFNLIEISNGPVREKCLRFLVPKIKMLGRDIMTKEIEEYTIDQ 121
++++++ K D KG L G+F+ I VRE+ ++FL K+K L DI+TKE+++Y +
Sbjct: 119 NALLSIFKMDAKGTLGGLFSQILQGEDVVRERAIKFLATKMKTLPEDILTKEVDDYIFSE 178
Query: 122 CKKILRNVTGDEFMQIMDLLAWSRLSQSLAGQKELMEIIKHHAELSKSFDPSNPEDVDRS 181
KK+L +VTG+EF+ M +L+ + Q+++G+++L++++ A L ++ +P++P+ VDR
Sbjct: 179 SKKVLYDVTGEEFVLFMKILSALKNLQTVSGRQQLVDLVSEQAGLHQTLNPADPDSVDRL 238
Query: 182 IYCSLHCVPYLCSAIPSTPFVSYLCEQVLPKLDQIPETKDEAGGLDNQLEALKLLAELSP 241
+ C VP + ST FV+Y CEQVLP L + A G+D QLE LKLLAE+S
Sbjct: 239 LQCMRQAVPLFSKNVHSTKFVTYFCEQVLPILSSLTSP---AEGIDVQLEVLKLLAEMSS 295
Query: 242 F 242
F
Sbjct: 296 F 296
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 262 VRKQAIKDLPSLCKENNEYTPKVTDILGQLLQTNDTTELSVVQSSIMTLCKNDIK 316
+R+QAIK+L E P+V DIL QLLQ++D+ E ++V ++++++ K D K
Sbjct: 78 IRRQAIKELSQFA--TGENLPRVADILTQLLQSDDSAEFNLVNNALLSIFKMDAK 130
>sp|Q6DDM4|API5A_XENLA Apoptosis inhibitor 5-A OS=Xenopus laevis GN=api5-a PE=2 SV=1
Length = 524
Score = 195 bits (496), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/241 (41%), Positives = 156/241 (64%), Gaps = 5/241 (2%)
Query: 2 DQAIEALFDLCEDEDVSVRKQAIKDLPSLCKENNEYTPKVTDILGQLLQTNDTTELSVVQ 61
D A+ A DLCEDEDVS+R+QAIK+L E P+V DIL QLLQ++D+ E ++V
Sbjct: 61 DSALNAQLDLCEDEDVSIRRQAIKELSQFA--TGENLPRVADILTQLLQSDDSAEFNLVN 118
Query: 62 SSIMTLCKNDIKGALKGMFNLIEISNGPVREKCLRFLVPKIKMLGRDIMTKEIEEYTIDQ 121
++++++ K D KG L G+F+ I VRE+ ++FL K+K L + +TKE+++Y +
Sbjct: 119 NALLSIFKMDAKGTLGGLFSQILQGEDIVRERAIKFLATKMKTLPEETLTKEVDDYIFSE 178
Query: 122 CKKILRNVTGDEFMQIMDLLAWSRLSQSLAGQKELMEIIKHHAELSKSFDPSNPEDVDRS 181
KK+L +VTG+EF+ M +L+ + Q+++G+++L++++ A L ++ +P++P+ VDR
Sbjct: 179 SKKVLYDVTGEEFVLFMKILSALKNLQTVSGRQQLVDLVSEQAGLHQTLNPADPDSVDRL 238
Query: 182 IYCSLHCVPYLCSAIPSTPFVSYLCEQVLPKLDQIPETKDEAGGLDNQLEALKLLAELSP 241
+ C VP + ST FV+Y CEQVLP L + A +D QLE LKLLAE+S
Sbjct: 239 LQCMRQAVPLFSKNVHSTKFVTYFCEQVLPILSTLTSP---AESIDVQLEVLKLLAEMSS 295
Query: 242 F 242
F
Sbjct: 296 F 296
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 262 VRKQAIKDLPSLCKENNEYTPKVTDILGQLLQTNDTTELSVVQSSIMTLCKNDIK 316
+R+QAIK+L E P+V DIL QLLQ++D+ E ++V ++++++ K D K
Sbjct: 78 IRRQAIKELSQFA--TGENLPRVADILTQLLQSDDSAEFNLVNNALLSIFKMDAK 130
>sp|Q9V431|API5_DROME Apoptosis inhibitor 5 homolog OS=Drosophila melanogaster GN=Aac11
PE=1 SV=1
Length = 536
Score = 172 bits (437), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 134/213 (62%), Gaps = 3/213 (1%)
Query: 2 DQAIEALFDLCEDEDVSVRKQAIKDLPSLCKENNEYTPKVTDILGQLLQTNDTTELSVVQ 61
D AI+A FDLCED+D +R+QAIKDLP LC+ N + T +V D L QLL +D TEL V
Sbjct: 61 DTAIDAQFDLCEDDDTQIRRQAIKDLPKLCQGNADATIRVGDTLAQLLILDDPTELQQVN 120
Query: 62 SSIMTLCKNDIKGALKGMFNLIEISNGPVREKCLRFLVPKIKMLGRDIMTKEIEEYTIDQ 121
+S++ + K D K ++ G+F I + RE+CL+F+ K+ +G ++TKEIE+Y +++
Sbjct: 121 NSLLAIIKLDTKSSIAGLFQQISTGDETTRERCLKFIATKLLTMGPTVITKEIEDYIVEE 180
Query: 122 CKKILRNVTGDEFMQIMDLLAWSRLSQSLAGQKELMEIIKHHAELSKS---FDPSNPEDV 178
KK L++VT DEF M +L ++L ++ G EL+++ AEL+ + + E V
Sbjct: 181 IKKALQDVTADEFHLCMTILGATKLGSTITGHAELVKLATEQAELNNTDADIIAVDDEVV 240
Query: 179 DRSIYCSLHCVPYLCSAIPSTPFVSYLCEQVLP 211
+R I C+ PY I ST FV+++C+++LP
Sbjct: 241 ERFIQCASAAAPYFSKTIKSTAFVAHVCDKLLP 273
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 262 VRKQAIKDLPSLCKENNEYTPKVTDILGQLLQTNDTTELSVVQSSIMTLCKNDIK 316
+R+QAIKDLP LC+ N + T +V D L QLL +D TEL V +S++ + K D K
Sbjct: 78 IRRQAIKDLPKLCQGNADATIRVGDTLAQLLILDDPTELQQVNNSLLAIIKLDTK 132
>sp|Q54CL0|API5_DICDI Apoptosis inhibitor 5 homolog OS=Dictyostelium discoideum GN=api5
PE=3 SV=1
Length = 606
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 7/113 (6%)
Query: 2 DQAIEALFDLCE--DEDVSVRKQAIKDLPSLCKENNEYTPKVTDILGQLLQTNDTTELSV 59
++AI+ L DL + DEDV +R A+K +P++C++N ++ K+ DIL QLL T+ E
Sbjct: 102 EKAIDCLIDLFDSSDEDVIMRVNALKAIPTICRDNPDHIAKLVDILSQLLNTDSKVEAEH 161
Query: 60 VQSSIMTLCKNDIKGALKGMFNLIE-----ISNGPVREKCLRFLVPKIKMLGR 107
++S++ L K + L +E + + P L FL I L R
Sbjct: 162 TKNSLIELYKLNSVTTLNSFLTFLESEESSMEDQPASSTLLSFLKESIIPLVR 214
Score = 39.7 bits (91), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 34/53 (64%)
Query: 260 LFVRKQAIKDLPSLCKENNEYTPKVTDILGQLLQTNDTTELSVVQSSIMTLCK 312
+ +R A+K +P++C++N ++ K+ DIL QLL T+ E ++S++ L K
Sbjct: 119 VIMRVNALKAIPTICRDNPDHIAKLVDILSQLLNTDSKVEAEHTKNSLIELYK 171
>sp|P27176|L_PUUMH RNA-directed RNA polymerase L OS=Puumala virus (strain Hallnas B1)
GN=L PE=3 SV=1
Length = 2156
Score = 35.4 bits (80), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 23/153 (15%)
Query: 67 LCKNDIKGALKGMFNLIEISNGPVREKCLRFLVPKIKMLGRDIMTKEIEEYTIDQCKKIL 126
L KND +GAL+ MFNL GP K F +P + + + + E ++ CK L
Sbjct: 198 LIKNDERGALEAMFNLKFHVTGP---KVRTFDIPNYR---PQQLCQPVLENLVEYCKNWL 251
Query: 127 RNVTGDEFMQIMDLLAWSRLSQSLAGQKELMEIIKHHAELSKSFDPSNPEDVDRSIYCSL 186
F ++ R+ ++EL H ++ S P N + C +
Sbjct: 252 GTDHAFAFKEVTG----QRVFNVFRDEEEL-----HASKYGHSRKPRN------FLLCQI 296
Query: 187 HC-VPYLCSAIPSTPFVSYL-CEQVLPKLDQIP 217
VPYL S I S + + L C ++L + P
Sbjct: 297 SLQVPYLPSTIASDQYDTRLACSEILKNYPETP 329
>sp|Q54J88|MMS19_DICDI MMS19 nucleotide excision repair protein homolog OS=Dictyostelium
discoideum GN=mms19 PE=3 SV=2
Length = 1115
Score = 35.4 bits (80), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
Query: 114 IEEYTIDQCKKILRNVTGDEFMQIMDLLAWSRLSQSLAGQKELMEIIKHHAELSKSFDPS 173
+E + + + K+ L+ ++ + I +LL LA E++ I+ +S S
Sbjct: 955 LESFKVSKNKE-LQTISSHYLIAISNLLKHVPKEILLAELNEILPIVM------QSLKSS 1007
Query: 174 NPEDVDRSIYCSLHCVPYLCSAIPSTPFVSYLCEQVLPKLDQIPETKDEAGGLDNQLEAL 233
+ D + + SL + L + PS+ F+SYL + ++P L +I + + LE L
Sbjct: 1008 DNNDQVQLLDSSLQTLTMLINETPSS-FISYL-DSLIPSLIKISTKSTKYNLKRSALEIL 1065
Query: 234 KLLAELSPFYVVHEDTPQHITSIVDCLFVRKQAIKDLPSLCK 275
LL++ PF + Q +T I+ CL +K+ ++ C+
Sbjct: 1066 TLLSKSIPFVNLFPYKTQVVTDIIPCLDDKKRIVRREAQKCR 1107
>sp|Q15MY9|ILVD_PSEA6 Dihydroxy-acid dehydratase OS=Pseudoalteromonas atlantica (strain
T6c / ATCC BAA-1087) GN=ilvD PE=3 SV=1
Length = 615
Score = 35.0 bits (79), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 19/63 (30%)
Query: 189 VPYLCSAIPSTPFVSYLCEQVLPKLDQIPETKDEAGGLDNQLEALKLLAELSPFYVVHED 248
VP+LC PSTP Y E V AGG+ L +LAEL+ ++HED
Sbjct: 308 VPHLCKVAPSTP--QYHMEDV-----------HRAGGV------LGILAELNRAGLLHED 348
Query: 249 TPQ 251
TP
Sbjct: 349 TPH 351
>sp|A9JRI0|HEAT6_DANRE HEAT repeat-containing protein 6 OS=Danio rerio GN=heatr6 PE=2 SV=1
Length = 1201
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 114 IEEYTID----QCKKILRNVTGDEFMQIMDLLAWSRLSQSLAG--QKELMEIIKHHAELS 167
++E+T+D C + LR + ++ LLA S L Q+ L +++ L
Sbjct: 135 VDEHTLDVLVSYCSRALRTCSSWTHSEV--LLALSSLVYGNGSKCQRYLPDLLGPSGVLV 192
Query: 168 KSFDPSNPE-DVDRSIYCSLHCVPYLCSAIPSTPFV 202
K DP P+ ++ RS ++HC+ LC ++PS P++
Sbjct: 193 KYGDPKQPDIELRRS---AVHCIANLCLSVPSQPYL 225
>sp|P0C760|L_PUUMS RNA-directed RNA polymerase L OS=Puumala virus (strain
Sotkamo/V-2969/81) GN=L PE=3 SV=1
Length = 2156
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 62/153 (40%), Gaps = 23/153 (15%)
Query: 67 LCKNDIKGALKGMFNLIEISNGPVREKCLRFLVPKIKMLGRDIMTKEIEEYTIDQCKKIL 126
L KND +GAL+ MFNL GP K F +P + + + I E +D CK L
Sbjct: 198 LIKNDERGALEAMFNLKFHVTGP---KVRTFDIPNYR---PQPLCQPILENLVDYCKNWL 251
Query: 127 RNVTGDEFMQIMDLLAWSRLSQSLAGQKELMEIIKHHAELSKSFDPSNPEDVDRSIYCSL 186
F ++ R+ ++E+ H ++ S P N + C +
Sbjct: 252 GTDHAFAFKEVTG----QRVFNVFREEEEI-----HASKYGHSRKPRN------FLLCQI 296
Query: 187 HC-VPYLCSAIPSTPFVSYL-CEQVLPKLDQIP 217
PYL S I S + + L C ++L + P
Sbjct: 297 SLQSPYLPSTIASDQYDTRLACSEILKNYPETP 329
>sp|O94680|PDAT_SCHPO Phospholipid:diacylglycerol acyltransferase OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=plh1 PE=1 SV=2
Length = 632
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 107 RDIMTKEIEEYTIDQCKKILRNVTGDEFMQIMDLLAWSRLSQSLAGQKELMEIIKHHAEL 166
R+ + K+ +E+ ID + L+NVT D+F ++ S LA ++ E++K++
Sbjct: 417 REDIDKDHDEFDIDDALQFLKNVTDDDFKVMLA----KNYSHGLAWTEK--EVLKNNEMP 470
Query: 167 SKSFDP---SNPEDVDRSIYCSLHCV 189
SK +P S P D IYC +H V
Sbjct: 471 SKWINPLETSLPYAPDMKIYC-VHGV 495
>sp|Q5B1X5|UTP10_EMENI U3 small nucleolar RNA-associated protein 10 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=utp10 PE=3 SV=1
Length = 1801
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 13/142 (9%)
Query: 149 SLAGQKELMEIIKHHAELSKSFDPSNPEDVDRSIYCSLHCVPY-LCSAIPSTPFVSYLCE 207
SL Q ++ EI++H + S S P + +D S L + Y L + I S P V+ E
Sbjct: 410 SLDTQTQIAEIVQHFSR-SSSLQPVFQKVIDES-SIDLSVIEYNLQTVIESVP-VNKAIE 466
Query: 208 QVLPKLDQIPETKDEAGGLDNQLEALKLLAELSPFYVVHEDTPQHITSIVDCLFV----- 262
V +++ +T+ G D+ LE+L + S ++ + P +V +
Sbjct: 467 DV--EMEDADKTETATDGYDSALESLAKESSFSTSFLTAQSIPV-FDKLVQTFALSAGSP 523
Query: 263 -RKQAIKDLPSLCKENNEYTPK 283
R A +LP LCK N +P+
Sbjct: 524 ERVSAFVELPVLCKANATTSPQ 545
>sp|A4XYL2|OBG_PSEMY GTPase obg OS=Pseudomonas mendocina (strain ymp) GN=obg PE=3 SV=1
Length = 406
Score = 32.0 bits (71), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 12/104 (11%)
Query: 201 FVSYLCEQ----VLPKLDQIPETKDEAGGLDNQLEALKLLAELSPFYVV----HEDTPQH 252
F L E+ VL K+DQIPE + EA + + + L P YVV + T +
Sbjct: 269 FSPALAERDRWLVLNKMDQIPEDEREA----RKADIVARLGWQGPVYVVSAISRDGTERI 324
Query: 253 ITSIVDCLFVRKQAIKDLPSLCKENNEYTPKVTDILGQLLQTND 296
I+ L VR + I + P +E E ++ D LQ D
Sbjct: 325 CRDIMHYLEVRAERIAEDPVFAEELAELDQRIEDEARARLQALD 368
>sp|B9L7B0|SYS_NAUPA Serine--tRNA ligase OS=Nautilia profundicola (strain ATCC BAA-1463
/ DSM 18972 / AmH) GN=serS PE=3 SV=1
Length = 416
Score = 31.6 bits (70), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 33/202 (16%)
Query: 11 LCEDEDVSVRKQAIKDLPSLCKENNEYTPKVTDILGQLLQTNDTTELSVVQSSIMTLCKN 70
+ +DED +V + + ++P+ ++ PK D LG+ L D T + S T+ K
Sbjct: 116 IGKDEDENVEIKRVGEIPTF-----DFEPKPHDELGEKLDWLDFTRGVKLAKSRFTVMKK 170
Query: 71 DIKGALKGMFNLIEISNGP--VREKCLRFLVPKIKMLG--------RDIMTKEIEE-YTI 119
D + + N N E + F+V + M G D+ E EE Y I
Sbjct: 171 DAARLERALINFFLDHNREWGFEEVYVPFMVNRETMTGTGQLPKFEEDLFKIENEELYLI 230
Query: 120 DQCKKILRNVTGDEFMQIMD----LLAWSRLSQSLAGQ--KELMEIIKHHAELSKSFDP- 172
+ L N+ DE + +D L A++ + AG K+ II+ H FD
Sbjct: 231 PTAEVPLTNLFRDEIITNLDEPIKLTAYTPCFRKEAGSYGKDTKGIIRQH-----QFDKV 285
Query: 173 -----SNPEDVDRSIYCSLHCV 189
+ PED D+ + C
Sbjct: 286 ELVAITKPEDSDKMFDEMVACA 307
>sp|P49502|RR14_ODOSI 30S ribosomal protein S14, chloroplastic OS=Odontella sinensis
GN=rps14 PE=3 SV=1
Length = 100
Score = 31.6 bits (70), Expect = 8.9, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 10/93 (10%)
Query: 20 RKQAIKDLPSLCKENNEYTPKVTDILGQLLQTNDTTELSVVQSSIMTLCKNDIK------ 73
+K I+ K NN+YTPK +L QT D + S I L +N K
Sbjct: 3 KKSMIEREKKRIKLNNKYTPKRNTLLQAYRQTEDFQSRLDIHSKIQKLPRNSAKNRIRNR 62
Query: 74 ----GALKGMFNLIEISNGPVREKCLRFLVPKI 102
G +G + +S +RE L+P +
Sbjct: 63 CWKTGRPRGFYRDFGVSRHVLREMAHSCLLPGV 95
>sp|P08817|ACP2_HORVU Acyl carrier protein 2, chloroplastic OS=Hordeum vulgare GN=ACL1.2
PE=1 SV=2
Length = 129
Score = 31.6 bits (70), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 274 CKENNEYTPKVTDILGQLLQTNDTTELSVVQSSIMTLCKNDIKVLSLSLGLNQCYHYRLD 333
C E KV DI+ L +D TE+S S+ L + + + + +GL + + ++
Sbjct: 48 CAAKKETVEKVCDIVKSQLALSDDTEVS-GSSTFADLGADSLDTVEIVMGLEEAFGISVE 106
Query: 334 LTSAITIA 341
+SA TIA
Sbjct: 107 ESSAQTIA 114
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 124,054,078
Number of Sequences: 539616
Number of extensions: 5033446
Number of successful extensions: 13700
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 13659
Number of HSP's gapped (non-prelim): 50
length of query: 343
length of database: 191,569,459
effective HSP length: 118
effective length of query: 225
effective length of database: 127,894,771
effective search space: 28776323475
effective search space used: 28776323475
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)