BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17475
(346 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9U3U0|RLA0_CERCA 60S acidic ribosomal protein P0 OS=Ceratitis capitata GN=RpLP0 PE=3
SV=1
Length = 317
Score = 426 bits (1095), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/258 (79%), Positives = 230/258 (89%), Gaps = 2/258 (0%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
+L DEYPKCF+VGADNVGS+Q QNIR SL GLGVVLMGKNTMMRKAIRGHLE+N LE+L
Sbjct: 19 ELFDEYPKCFIVGADNVGSKQMQNIRTSLRGLGVVLMGKNTMMRKAIRGHLENNAQLEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHIKGNVGFVFT+GDL EVR+KLLE+KV+APAR GAIAP PV IPAQNTGLGPEKTSFF
Sbjct: 79 LPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARAGAIAPLPVIIPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QALSIPTKISKGTIEIINDV ILK GD + EATLLNMLNISPFSYGL I VYDSG+I
Sbjct: 139 QALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLAITQVYDSGSI 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
F+P+ILDI+PEDLR KF GVA LA+V L IGYPT+AS PHSI NGFKN+LA+AA+TEV+
Sbjct: 199 FSPEILDIKPEDLRAKFQAGVANLAAVSLQIGYPTIASAPHSIANGFKNLLAIAASTEVE 258
Query: 239 FEQAKTVKEFLKDPSKFL 256
F+QA T+KEF+KDPSKF+
Sbjct: 259 FKQAATIKEFIKDPSKFV 276
Score = 104 bits (260), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 57/70 (81%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ S+ +NDV ILK GDKVG SEATLLNMLNISPFSYGL I VYDSG+IF+P+ILD
Sbjct: 146 KISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLAITQVYDSGSIFSPEILD 205
Query: 335 IRPEDLRVKF 344
I+PEDLR KF
Sbjct: 206 IKPEDLRAKF 215
>sp|P19889|RLA0_DROME 60S acidic ribosomal protein P0 OS=Drosophila melanogaster GN=RpLP0
PE=1 SV=1
Length = 317
Score = 424 bits (1091), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/257 (78%), Positives = 231/257 (89%), Gaps = 2/257 (0%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
+L DE+PKCF+VGADNVGS+Q QNIR SL GL VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 ELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKAIRGHLENNPQLEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHIKGNVGFVFT+GDL EVR+KLLE+KV+APAR GAIAP V IPAQNTGLGPEKTSFF
Sbjct: 79 LPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QALSIPTKISKGTIEIINDV ILK GD + EATLLNMLNISPFSYGLI+ VYDSG+I
Sbjct: 139 QALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSI 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
F+P+ILDI+PEDLR KF +GVA LA+VCLS+GYPT+AS PHSI NGFKN+LA+AA TEV+
Sbjct: 199 FSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVE 258
Query: 239 FEQAKTVKEFLKDPSKF 255
F++A T+KE++KDPSKF
Sbjct: 259 FKEATTIKEYIKDPSKF 275
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 58/70 (82%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ S+ +NDV ILK GDKVG SEATLLNMLNISPFSYGLI+ VYDSG+IF+P+ILD
Sbjct: 146 KISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSIFSPEILD 205
Query: 335 IRPEDLRVKF 344
I+PEDLR KF
Sbjct: 206 IKPEDLRAKF 215
>sp|Q9DG68|RLA0_RANSY 60S acidic ribosomal protein P0 OS=Rana sylvatica GN=RPLP0 PE=2
SV=1
Length = 315
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/257 (71%), Positives = 213/257 (82%), Gaps = 2/257 (0%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+N LE+L
Sbjct: 19 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNSALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHIKGNVGFVFT+ DL EVR+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIKGNVGFVFTKEDLAEVRDMLLANKVPASARAGAIAPCDVTVPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL I TKIS+GTIEI++DV ++K GD + EATLLNMLNISPFS+GLII+ VYD+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVYDNGSI 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
++P++LDI + LR +FLEGV +ASVCL IGYPTVASVPHS+VNG+K VLA+A T+
Sbjct: 199 YSPEVLDITEDALRARFLEGVRNIASVCLQIGYPTVASVPHSVVNGYKRVLALAVETDYS 258
Query: 239 FEQAKTVKEFLKDPSKF 255
F A VK FL DPS F
Sbjct: 259 FPLADKVKAFLADPSAF 275
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 58/72 (80%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ SR L+DV ++K GDKVG SEATLLNMLNISPFS+GLII+ VYD+G+I++P++LD
Sbjct: 146 KISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVYDNGSIYSPEVLD 205
Query: 335 IRPEDLRVKFLE 346
I + LR +FLE
Sbjct: 206 ITEDALRARFLE 217
>sp|Q29214|RLA0_PIG 60S acidic ribosomal protein P0 OS=Sus scrofa GN=RPLP0 PE=2 SV=2
Length = 318
Score = 362 bits (928), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 180/257 (70%), Positives = 213/257 (82%), Gaps = 2/257 (0%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGFVFT+ DL E+R+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL I TKIS+GTIEI++DV ++K GD + EATLLNMLNISPFS+GLII+ V+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSI 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
+ P++LDI E L +FLEGV +ASVCL IGYPTVASVPHSI+NG+K VLA++ T+
Sbjct: 199 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYT 258
Query: 239 FEQAKTVKEFLKDPSKF 255
F A+ VK FL DPS F
Sbjct: 259 FPLAEKVKAFLADPSAF 275
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 56/72 (77%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ SR L+DV ++K GDKVG SEATLLNMLNISPFS+GLII+ V+D+G+I+ P++LD
Sbjct: 146 KISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSIYNPEVLD 205
Query: 335 IRPEDLRVKFLE 346
I E L +FLE
Sbjct: 206 ITEETLHSRFLE 217
>sp|P05388|RLA0_HUMAN 60S acidic ribosomal protein P0 OS=Homo sapiens GN=RPLP0 PE=1 SV=1
Length = 317
Score = 361 bits (927), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 179/257 (69%), Positives = 213/257 (82%), Gaps = 2/257 (0%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGFVFT+ DL E+R+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL I TKIS+GTIEI++DV ++K GD + EATLLNMLNISPFS+GL+I+ V+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
+ P++LDI E L +FLEGV +ASVCL IGYPTVASVPHSI+NG+K VLA++ T+
Sbjct: 199 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYT 258
Query: 239 FEQAKTVKEFLKDPSKF 255
F A+ VK FL DPS F
Sbjct: 259 FPLAEKVKAFLADPSAF 275
Score = 91.3 bits (225), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 56/72 (77%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ SR L+DV ++K GDKVG SEATLLNMLNISPFS+GL+I+ V+D+G+I+ P++LD
Sbjct: 146 KISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLD 205
Query: 335 IRPEDLRVKFLE 346
I E L +FLE
Sbjct: 206 ITEETLHSRFLE 217
>sp|Q95140|RLA0_BOVIN 60S acidic ribosomal protein P0 OS=Bos taurus GN=RPLP0 PE=2 SV=3
Length = 318
Score = 361 bits (927), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 179/257 (69%), Positives = 213/257 (82%), Gaps = 2/257 (0%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGFVFT+ DL E+R+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL I TKIS+GTIEI++DV ++K GD + EATLLNMLNISPFS+GL+I+ V+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
+ P++LDI E L +FLEGV +ASVCL IGYPTVASVPHSI+NG+K VLA++ T+
Sbjct: 199 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYT 258
Query: 239 FEQAKTVKEFLKDPSKF 255
F A+ VK FL DPS F
Sbjct: 259 FPLAEKVKAFLADPSAF 275
Score = 91.3 bits (225), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 56/72 (77%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ SR L+DV ++K GDKVG SEATLLNMLNISPFS+GL+I+ V+D+G+I+ P++LD
Sbjct: 146 KISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLD 205
Query: 335 IRPEDLRVKFLE 346
I E L +FLE
Sbjct: 206 ITEETLHSRFLE 217
>sp|P47826|RLA0_CHICK 60S acidic ribosomal protein P0 OS=Gallus gallus GN=RPLP0 PE=2 SV=1
Length = 316
Score = 361 bits (926), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 181/255 (70%), Positives = 212/255 (83%), Gaps = 2/255 (0%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCFVVGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLDDYPKCFVVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGFVFT+ DL E+R+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCDVTVPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL I TKIS+GTIEI++DV ++K GD + EATLLNMLNISPFS+GL+I+ V+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
+ P++LDI E L +FLEGV +ASVCL IGYPT+ASVPHSIVNG+K VLAVA T+
Sbjct: 199 YNPEVLDITEETLHKRFLEGVRNVASVCLQIGYPTIASVPHSIVNGYKRVLAVAVETDYT 258
Query: 239 FEQAKTVKEFLKDPS 253
F A+ VK FL DPS
Sbjct: 259 FPLAEKVKAFLADPS 273
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 56/72 (77%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ SR L+DV ++K GDKVG SEATLLNMLNISPFS+GL+I+ V+D+G+I+ P++LD
Sbjct: 146 KISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLD 205
Query: 335 IRPEDLRVKFLE 346
I E L +FLE
Sbjct: 206 ITEETLHKRFLE 217
>sp|P14869|RLA0_MOUSE 60S acidic ribosomal protein P0 OS=Mus musculus GN=Rplp0 PE=1 SV=3
Length = 317
Score = 359 bits (922), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 179/257 (69%), Positives = 212/257 (82%), Gaps = 2/257 (0%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGFVFT+ DL E+R+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL I TKIS+GTIEI++DV ++K GD + EATLLNMLNISPFS+GLII+ V+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSI 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
+ P++LDI + L +FLEGV +ASVCL IGYPTVASVPHSI+NG+K VLA++ TE
Sbjct: 199 YNPEVLDITEQALHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETEYT 258
Query: 239 FEQAKTVKEFLKDPSKF 255
F + VK FL DPS F
Sbjct: 259 FPLTEKVKAFLADPSAF 275
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 56/72 (77%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ SR L+DV ++K GDKVG SEATLLNMLNISPFS+GLII+ V+D+G+I+ P++LD
Sbjct: 146 KISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSIYNPEVLD 205
Query: 335 IRPEDLRVKFLE 346
I + L +FLE
Sbjct: 206 ITEQALHSRFLE 217
>sp|Q90YX1|RLA0_ICTPU 60S acidic ribosomal protein P0 OS=Ictalurus punctatus GN=rplp0
PE=2 SV=1
Length = 317
Score = 359 bits (921), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 177/257 (68%), Positives = 213/257 (82%), Gaps = 2/257 (0%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+++YPKCF+VGADNVGS+Q Q IR SL G +VLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLNDYPKCFIVGADNVGSKQMQTIRLSLRGKAIVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGFVFT+ DL EVR+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIRGNVGFVFTKEDLPEVRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL I TKIS+GTIEI++DV +++ GD + EATLLNMLNISPFSYGLII+ VYD+G++
Sbjct: 139 QALGITTKISRGTIEILSDVQLIRPGDKVGASEATLLNMLNISPFSYGLIIQQVYDNGSV 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
++P++LDI + L +FLEGV +ASVCL IGYPT+AS+PHSI+NG+K VL VA T+
Sbjct: 199 YSPEVLDITEDALHKRFLEGVRNIASVCLQIGYPTLASIPHSIINGYKRVLRVAVETDYS 258
Query: 239 FEQAKTVKEFLKDPSKF 255
F A VK FL DPS+F
Sbjct: 259 FPMADKVKAFLADPSRF 275
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 57/72 (79%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ SR L+DV +++ GDKVG SEATLLNMLNISPFSYGLII+ VYD+G++++P++LD
Sbjct: 146 KISRGTIEILSDVQLIRPGDKVGASEATLLNMLNISPFSYGLIIQQVYDNGSVYSPEVLD 205
Query: 335 IRPEDLRVKFLE 346
I + L +FLE
Sbjct: 206 ITEDALHKRFLE 217
>sp|Q93572|RLA0_CAEEL 60S acidic ribosomal protein P0 OS=Caenorhabditis elegans GN=rpa-0
PE=1 SV=3
Length = 312
Score = 354 bits (908), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 160/257 (62%), Positives = 208/257 (80%), Gaps = 2/257 (0%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
+L +EYPKC +VG DNVGS+Q Q IRQ++ G +LMGKNTM+RKA+RGHL NP LE+L
Sbjct: 19 ELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIRKALRGHLGKNPSLEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI NVGFVFT+ DL E+R KLLEN+ APA+ GAIAPC V +P QNTG+GPEKTSFF
Sbjct: 79 LPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTGMGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL IPTKI++GTIEI+NDVH++KEGD + E+ LLNML ++PFSYGL+++ VYD GT+
Sbjct: 139 QALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTPFSYGLVVRQVYDDGTL 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
+ P++LD+ E+LR +FL GV +ASV L++ YPT+ASV HS+ NG +N+L VAA T+V
Sbjct: 199 YTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHSLANGLQNMLGVAAVTDVS 258
Query: 239 FEQAKTVKEFLKDPSKF 255
F++A+T+K F+ DPSKF
Sbjct: 259 FKEAETIKAFIADPSKF 275
Score = 94.7 bits (234), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 56/71 (78%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ +R LNDVH++KEGDKVG SE+ LLNML ++PFSYGL+++ VYD GT++ P++LD
Sbjct: 146 KIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTPFSYGLVVRQVYDDGTLYTPEVLD 205
Query: 335 IRPEDLRVKFL 345
+ E+LR +FL
Sbjct: 206 MTTEELRKRFL 216
>sp|P19945|RLA0_RAT 60S acidic ribosomal protein P0 OS=Rattus norvegicus GN=Rplp0 PE=1
SV=2
Length = 317
Score = 353 bits (906), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 175/251 (69%), Positives = 210/251 (83%), Gaps = 2/251 (0%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGFVFT+ DL E+R+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL I TKIS+GTIEI++DV ++K GD + EATLLNMLNISPFS+GLII+ V+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSI 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
++P++LDI + L +FLEGV +ASVCL IGYPTVASVPHSI+NG+K VLA++ T+
Sbjct: 199 YSPEVLDITEQALHTRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYT 258
Query: 239 FEQAKTVKEFL 249
F A+ VK FL
Sbjct: 259 FPLAEKVKAFL 269
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 57/72 (79%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ SR L+DV ++K GDKVG SEATLLNMLNISPFS+GLII+ V+D+G+I++P++LD
Sbjct: 146 KISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSIYSPEVLD 205
Query: 335 IRPEDLRVKFLE 346
I + L +FLE
Sbjct: 206 ITEQALHTRFLE 217
>sp|Q8NHW5|RLA0L_HUMAN 60S acidic ribosomal protein P0-like OS=Homo sapiens GN=RPLP0P6
PE=5 SV=1
Length = 317
Score = 352 bits (902), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 176/255 (69%), Positives = 209/255 (81%), Gaps = 2/255 (0%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI GNVGFVFT+ DL E+R+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL I TKIS+GTIEI++DV ++K GD + EATLLNMLNISPFS+GL+I+ V+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
+ P++LD E L +FLEGV +ASVCL GYPTVASVPHSI+NG+K VLA++ T+
Sbjct: 199 YNPEVLDKTEETLHSRFLEGVRNVASVCLQTGYPTVASVPHSIINGYKRVLALSVETDYT 258
Query: 239 FEQAKTVKEFLKDPS 253
F A+ VK FL DPS
Sbjct: 259 FPLAENVKAFLADPS 273
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 55/72 (76%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ SR L+DV ++K GDKVG SEATLLNMLNISPFS+GL+I+ V+D+G+I+ P++LD
Sbjct: 146 KISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLD 205
Query: 335 IRPEDLRVKFLE 346
E L +FLE
Sbjct: 206 KTEETLHSRFLE 217
>sp|Q9PV90|RLA0_DANRE 60S acidic ribosomal protein P0 OS=Danio rerio GN=rplp0 PE=2 SV=1
Length = 319
Score = 349 bits (896), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 175/258 (67%), Positives = 212/258 (82%), Gaps = 5/258 (1%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D++PKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LERL
Sbjct: 19 QLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTMMRKAIRGHLENNPALERL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGFVFT+ DL EVR+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATL---LNMLNISPFSYGLIIKMVYDS 175
QAL I TKIS+GTIEI++DV ++K GD + EATL LNMLNISPFSYGLII+ VYD+
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKPGDKVGASEATLLNMLNMLNISPFSYGLIIQQVYDN 198
Query: 176 GTIFAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAAT 235
G++++P++LDI + L +FL+GV +ASVCL IGYPT+AS+PH+I+NG+K VLAV T
Sbjct: 199 GSVYSPEVLDITEDALHKRFLKGVRNIASVCLQIGYPTLASIPHTIINGYKRVLAVTVET 258
Query: 236 EVDFEQAKTVKEFLKDPS 253
+ F A+ VK +L DP+
Sbjct: 259 DYTFPLAEKVKAYLADPT 276
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 57/75 (76%), Gaps = 3/75 (4%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLN---ISPFSYGLIIKMVYDSGTIFAPQ 331
+ SR L+DV ++K GDKVG SEATLLNMLN ISPFSYGLII+ VYD+G++++P+
Sbjct: 146 KISRGTIEILSDVQLIKPGDKVGASEATLLNMLNMLNISPFSYGLIIQQVYDNGSVYSPE 205
Query: 332 ILDIRPEDLRVKFLE 346
+LDI + L +FL+
Sbjct: 206 VLDITEDALHKRFLK 220
>sp|Q42112|RLA02_ARATH 60S acidic ribosomal protein P0-2 OS=Arabidopsis thaliana GN=RPP0B
PE=1 SV=2
Length = 320
Score = 291 bits (745), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 140/259 (54%), Positives = 189/259 (72%), Gaps = 4/259 (1%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEH--NPGLE 58
QL+DEY + VV ADNVGS Q QNIR+ L G VVLMGKNTMM++++R H E+ N +
Sbjct: 19 QLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENTGNTAIL 78
Query: 59 RLLPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTS 118
LLP ++GNVG +FT+GDL EV E++ + KV APAR G +AP V + NTGL P +TS
Sbjct: 79 NLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTS 138
Query: 119 FFQALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSG 176
FFQ L+IPTKI+KGT+EII V ++K+GD S EA LL L I PFSYGL+++ VYD+G
Sbjct: 139 FFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYDNG 198
Query: 177 TIFAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATE 236
++F+P++LD+ + L KF G++ + S+ L++ YPT+A+ PH +N +KN LA+A ATE
Sbjct: 199 SVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATE 258
Query: 237 VDFEQAKTVKEFLKDPSKF 255
F QA+ VKE+LKDPSKF
Sbjct: 259 YTFPQAEKVKEYLKDPSKF 277
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 45/58 (77%)
Query: 287 VHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKF 344
V ++K+GDKVG SEA LL L I PFSYGL+++ VYD+G++F+P++LD+ + L KF
Sbjct: 160 VELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKF 217
>sp|P57691|RLA03_ARATH 60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana GN=RPP0C
PE=1 SV=1
Length = 323
Score = 291 bits (744), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 140/259 (54%), Positives = 189/259 (72%), Gaps = 4/259 (1%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEH--NPGLE 58
QL+DEY + VV ADNVGS Q QNIR+ L G VVLMGKNTMM++++R H E+ N +
Sbjct: 19 QLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENSGNTAIL 78
Query: 59 RLLPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTS 118
LLP ++GNVG +FT+GDL EV E++ + KV APAR G +AP V + NTGL P +TS
Sbjct: 79 NLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTS 138
Query: 119 FFQALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSG 176
FFQ L+IPTKI+KGT+EII V ++K+GD S EA LL L I PFSYGL+++ VYD+G
Sbjct: 139 FFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYDNG 198
Query: 177 TIFAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATE 236
++F+P++LD+ + L KF G++ + S+ L++ YPT+A+ PH +N +KN LA+A AT+
Sbjct: 199 SVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATD 258
Query: 237 VDFEQAKTVKEFLKDPSKF 255
F QA+ VKEFLKDPSKF
Sbjct: 259 YTFPQAEKVKEFLKDPSKF 277
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 45/58 (77%)
Query: 287 VHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKF 344
V ++K+GDKVG SEA LL L I PFSYGL+++ VYD+G++F+P++LD+ + L KF
Sbjct: 160 VELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKF 217
>sp|O04204|RLA01_ARATH 60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana GN=RPP0A
PE=1 SV=1
Length = 317
Score = 291 bits (744), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 146/269 (54%), Positives = 194/269 (72%), Gaps = 5/269 (1%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEH--NPGLE 58
QL++EY + VV ADNVGS Q QNIR+ L G VVLMGKNTMM++++R H + N
Sbjct: 20 QLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHADKTGNQAFL 79
Query: 59 RLLPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTS 118
LLP ++GNVG +FT+GDL EV E++ + KV APAR G +AP V + NTGL P +TS
Sbjct: 80 SLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTS 139
Query: 119 FFQALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSG 176
FFQ L+IPTKI+KGT+EII V ++K+GD S EA LL L I PFSYGL+++ VYD+G
Sbjct: 140 FFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVESVYDNG 199
Query: 177 TIFAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATE 236
++F P++L++ +DL KF GV+ + ++ L+I YPTVA+ PH +N +KNVLAVA ATE
Sbjct: 200 SVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAAPHMFLNAYKNVLAVALATE 259
Query: 237 VDFEQAKTVKEFLKDPSKF-LAAAAPAAA 264
F QA+ VKEFLKDP+KF +A AAP +
Sbjct: 260 YSFPQAENVKEFLKDPTKFAVAVAAPVSG 288
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 45/58 (77%)
Query: 287 VHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKF 344
V ++K+GDKVG SEA LL L I PFSYGL+++ VYD+G++F P++L++ +DL KF
Sbjct: 161 VELIKKGDKVGSSEAALLAKLGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKF 218
>sp|P41095|RLA0_ORYSJ 60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica
GN=Os08g0130500 PE=1 SV=3
Length = 319
Score = 282 bits (721), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 148/273 (54%), Positives = 194/273 (71%), Gaps = 5/273 (1%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEH--NPGLE 58
QL+DEY K + ADNVGS Q Q IR+ L G +VLMGKNT++R+ I+ H ++ N
Sbjct: 20 QLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHADNTGNKEFL 79
Query: 59 RLLPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTS 118
L+P + GNVG +FT+GDL EVRE++ + KV APAR G +AP V +P NTGL P +TS
Sbjct: 80 ELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTS 139
Query: 119 FFQALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSG 176
FFQ L+IPTKI+KGT+EII V ++K+GD S E+ LL L I PFSYGL+I VYDSG
Sbjct: 140 FFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSG 199
Query: 177 TIFAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATE 236
++F+P++LD+ +DL KF GV+ +ASV L+I YPT+A+ PH +NG+KNVLAVA TE
Sbjct: 200 SVFSPEVLDLTEDDLMEKFASGVSMVASVSLAISYPTIAAAPHMFLNGYKNVLAVAVETE 259
Query: 237 VDFEQAKTVKEFLKDPSKFLAAAAPAAAAPAAS 269
+ A +KE+LKDPSKF A AAP AA A+
Sbjct: 260 YSYPHADKIKEYLKDPSKF-AVAAPVAADSGAA 291
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 45/58 (77%)
Query: 287 VHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKF 344
V ++K+GDKVG SE+ LL L I PFSYGL+I VYDSG++F+P++LD+ +DL KF
Sbjct: 161 VELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTEDDLMEKF 218
>sp|P50346|RLA0_SOYBN 60S acidic ribosomal protein P0 OS=Glycine max PE=2 SV=1
Length = 320
Score = 281 bits (719), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 139/259 (53%), Positives = 185/259 (71%), Gaps = 4/259 (1%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEH--NPGLE 58
L++EY + VV +DNVGS Q QNIR+ L G VVLMGKNTMM++++R H E N
Sbjct: 20 DLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSVRMHAEKTGNNAYL 79
Query: 59 RLLPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTS 118
L+P + GNVG +FT+GDL EV E++ + KV APAR G +AP V +P NTGL P +TS
Sbjct: 80 NLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTS 139
Query: 119 FFQALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSG 176
FFQ L+IPTKI+KGT+EII V ++++GD S EA LL L I PFSYGL++ VYD+G
Sbjct: 140 FFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNG 199
Query: 177 TIFAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATE 236
++F+P++LD+ +DL KF GV+ + S+ L+I YPT+A+ PH VN +KNVLAVA T+
Sbjct: 200 SVFSPEVLDLTEDDLIGKFAAGVSMVTSLSLAISYPTLAAAPHMFVNAYKNVLAVAVETD 259
Query: 237 VDFEQAKTVKEFLKDPSKF 255
F +A VKE+LKDPSKF
Sbjct: 260 YSFPEADKVKEYLKDPSKF 278
Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 45/58 (77%)
Query: 287 VHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKF 344
V ++++GDKVG SEA LL L I PFSYGL++ VYD+G++F+P++LD+ +DL KF
Sbjct: 161 VELIRKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIGKF 218
>sp|O74864|RLA0_SCHPO 60S acidic ribosomal protein P0 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rpp0 PE=3 SV=1
Length = 312
Score = 278 bits (710), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 137/260 (52%), Positives = 180/260 (69%), Gaps = 6/260 (2%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
L ++Y FVV DNV S+Q +R+ L G ++MGKNTM+R+A+RG + P LERL
Sbjct: 17 SLFEKYNSLFVVNIDNVSSQQMHTVRKQLRGTAELIMGKNTMIRRAMRGIINDMPELERL 76
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LP ++GNVGFVFT DL EVRE ++ N + APAR AIAP V +PA NTG+ P KTSFF
Sbjct: 77 LPVVRGNVGFVFTNADLKEVRETIIANVIAAPARPNAIAPLDVFVPAGNTGMEPGKTSFF 136
Query: 121 QALSIPTKISKGTIEIINDVHIL----KEGDSSREATLLNMLNISPFSYGLIIKMVYDSG 176
QAL IPTKI++GTIEI +DVH++ K G S EATLLNMLNISPF+YG+ + +YD G
Sbjct: 137 QALGIPTKITRGTIEITSDVHLVSKDAKVGPS--EATLLNMLNISPFTYGMDVLTIYDQG 194
Query: 177 TIFAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATE 236
+F+P+ILD+ EDL L + + ++ L YPT+ SV HS+VN +KN++AV+ ATE
Sbjct: 195 NVFSPEILDVSEEDLIGHLLSAASIITAISLGANYPTILSVMHSVVNAYKNLVAVSLATE 254
Query: 237 VDFEQAKTVKEFLKDPSKFL 256
FE + K FL DPS F+
Sbjct: 255 YTFEGTEQTKAFLADPSAFV 274
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 46/56 (82%)
Query: 285 NDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDL 340
+DVH++ + KVGPSEATLLNMLNISPF+YG+ + +YD G +F+P+ILD+ EDL
Sbjct: 154 SDVHLVSKDAKVGPSEATLLNMLNISPFTYGMDVLTIYDQGNVFSPEILDVSEEDL 209
>sp|O24573|RLA0_MAIZE 60S acidic ribosomal protein P0 OS=Zea mays GN=RP-P0 PE=1 SV=3
Length = 319
Score = 265 bits (676), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 140/265 (52%), Positives = 189/265 (71%), Gaps = 5/265 (1%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEH--NPGLE 58
L+DEY K + ADNVGS+Q Q+IR+ L G VVLMGKNT++R+ I+ + E N +
Sbjct: 20 SLLDEYTKVLIALADNVGSKQLQDIRRGLRGDSVVLMGKNTLIRRCIKVYAEKTGNHTFD 79
Query: 59 RLLPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTS 118
L+ + GNVG +FT+GDL EVRE++ + KV APAR G +AP V +P NTGL P +TS
Sbjct: 80 PLMDLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTS 139
Query: 119 FFQALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSG 176
FFQ L+IPTKI+KGT+EII V ++K+G+ S E+ LL L I PFSYGL + VY+ G
Sbjct: 140 FFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSESALLAKLGIRPFSYGLQVTSVYEDG 199
Query: 177 TIFAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATE 236
++F+P++LD+ EDL KF GV+ +AS+ L+I YPT+A+VPH +NG+KNVLAVA T+
Sbjct: 200 SVFSPEVLDLSEEDLIEKFATGVSMVASLSLAISYPTLAAVPHMFINGYKNVLAVAVETD 259
Query: 237 VDFEQAKTVKEFLKDPSKFLAAAAP 261
+ A +KE+LKDPSKF A AAP
Sbjct: 260 YSYPHADKIKEYLKDPSKF-AVAAP 283
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 43/58 (74%)
Query: 287 VHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKF 344
V ++K+G+KVG SE+ LL L I PFSYGL + VY+ G++F+P++LD+ EDL KF
Sbjct: 161 VELIKKGEKVGSSESALLAKLGIRPFSYGLQVTSVYEDGSVFSPEVLDLSEEDLIEKF 218
>sp|P50345|RLA0_LUPLU 60S acidic ribosomal protein P0 OS=Lupinus luteus PE=2 SV=1
Length = 322
Score = 260 bits (664), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 136/256 (53%), Positives = 174/256 (67%), Gaps = 4/256 (1%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEH--NPGLE 58
QL+DEY + VV ADNVGS+Q QNIRQ L G VVLMGKNTMM++++R H E N
Sbjct: 20 QLLDEYTQILVVNADNVGSKQLQNIRQGLRGDSVVLMGKNTMMKRSVRIHAEKTGNQAFL 79
Query: 59 RLLPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTS 118
L+P + GNVG +FT+G L EV E++ + KV APA G +AP V +P NTGL P +TS
Sbjct: 80 NLIPLLIGNVGLIFTKGYLKEVSEEVAKYKVGAPACVGLVAPIDVVVPPGNTGLDPSQTS 139
Query: 119 FFQALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSG 176
FFQ L+IPTKI+KGT+EII V ++K+GD S EA LL L I PFSYGL++ VYD+G
Sbjct: 140 FFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNG 199
Query: 177 TIFAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATE 236
++F P++LD+ +DL KF GV+ S P ++ PH +N +KNVLAVA ATE
Sbjct: 200 SVFKPEVLDLTEDDLLEKFAIGVSQCYFSDTSHFIPNPSAAPHVFINAYKNVLAVAVATE 259
Query: 237 VDFEQAKTVKEFLKDP 252
F QA VKE+LKDP
Sbjct: 260 YSFPQADEVKEYLKDP 275
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 287 VHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKF 344
V ++K+GDKVG SEA LL L I PFSYGL++ VYD+G++F P++LD+ +DL KF
Sbjct: 161 VELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFKPEVLDLTEDDLLEKF 218
>sp|Q96TJ5|RLA0_NEUCR 60S acidic ribosomal protein P0 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=crpp0 PE=2 SV=1
Length = 313
Score = 251 bits (642), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 136/248 (54%), Positives = 175/248 (70%), Gaps = 2/248 (0%)
Query: 2 LVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERLL 61
L+++Y F+V DNV S+Q IRQSL G VVLMGKNTM+R+A++ + P ERLL
Sbjct: 18 LLEDYRSIFIVSVDNVSSQQMHEIRQSLRGEAVVLMGKNTMVRRALKTFVADTPEYERLL 77
Query: 62 PHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFFQ 121
P +KGNVGFVFT GDL EVR+K+L NKV APAR GAIAP V IPA NTG+ P KTSFFQ
Sbjct: 78 PFVKGNVGFVFTNGDLKEVRDKILANKVAAPARAGAIAPADVWIPAGNTGMEPGKTSFFQ 137
Query: 122 ALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSGTIF 179
AL +PTKI++GTIEI D+ +++ G EATLLNMLNISPF+YG+ I VYD G F
Sbjct: 138 ALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNMLNISPFTYGMGIAQVYDQGNTF 197
Query: 180 APQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVDF 239
+LDI E L F + T+AS+ L++ +PT+ SV HS+VN +K VLAVA TE+ +
Sbjct: 198 PSDVLDISEEQLLKAFSTAITTIASLSLALNFPTLPSVIHSVVNAYKKVLAVAIETEISW 257
Query: 240 EQAKTVKE 247
+ + +K+
Sbjct: 258 PEIEELKD 265
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 41/59 (69%)
Query: 286 DVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKF 344
D+ +++ G KVGPSEATLLNMLNISPF+YG+ I VYD G F +LDI E L F
Sbjct: 155 DLKLVEAGAKVGPSEATLLNMLNISPFTYGMGIAQVYDQGNTFPSDVLDISEEQLLKAF 213
>sp|Q9C3Z6|RLA0_PODAS 60S acidic ribosomal protein P0 OS=Podospora anserina PE=3 SV=1
Length = 314
Score = 251 bits (640), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 135/248 (54%), Positives = 176/248 (70%), Gaps = 2/248 (0%)
Query: 2 LVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERLL 61
L++EY F+V DNV S+Q IRQ+L GVVLMGKNTM+R+A++ L +P ERLL
Sbjct: 18 LLEEYKSIFIVSVDNVSSQQMHEIRQALRDQGVVLMGKNTMVRRALKTFLVDSPEYERLL 77
Query: 62 PHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFFQ 121
P +KGNVGFVFT GDL E+R+K+L NKV APAR GA+AP V IPA NTG+ P KTSFFQ
Sbjct: 78 PFVKGNVGFVFTNGDLKEIRDKILANKVAAPARAGAVAPVDVWIPAGNTGMEPGKTSFFQ 137
Query: 122 ALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSGTIF 179
AL +PTKI++GTIEI D+ +++ G EATLLNMLNISPF+YG+ I VYD G F
Sbjct: 138 ALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNMLNISPFTYGMGIAQVYDQGNTF 197
Query: 180 APQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVDF 239
+LDI E L F + T+A+V L++ +PT+ SV HS+VN +K VLAVA TE+ +
Sbjct: 198 PSSVLDISEEQLLKAFSSAITTIAAVSLALNFPTLPSVIHSLVNSYKKVLAVAIETEISW 257
Query: 240 EQAKTVKE 247
+ + +K+
Sbjct: 258 PEIEELKD 265
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 41/60 (68%)
Query: 285 NDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKF 344
D+ +++ G KVGPSEATLLNMLNISPF+YG+ I VYD G F +LDI E L F
Sbjct: 154 TDLKLVEAGAKVGPSEATLLNMLNISPFTYGMGIAQVYDQGNTFPSSVLDISEEQLLKAF 213
>sp|P05317|RLA0_YEAST 60S acidic ribosomal protein P0 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPP0 PE=1 SV=2
Length = 312
Score = 242 bits (618), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/257 (49%), Positives = 183/257 (71%), Gaps = 2/257 (0%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
+ ++EY FVVG DNV S+Q +R+ L G VVLMGKNTM+R+AIRG L P E+L
Sbjct: 17 EYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRGFLSDLPDFEKL 76
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LP +KGNVGFVFT L E++ ++ N+V APAR GA+AP + + A NTG+ P KTSFF
Sbjct: 77 LPFVKGNVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWVRAVNTGMEPGKTSFF 136
Query: 121 QALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL +PTKI++GTIEI++DV ++ G+ EA+LLN+LNISPF++GL + VYD+G +
Sbjct: 137 QALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTFGLTVVQVYDNGQV 196
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
F ILDI E+L F+ V+T+AS+ L+IGYPT+ SV H+++N +K++LAVA A
Sbjct: 197 FPSSILDITDEELVSHFVSAVSTIASISLAIGYPTLPSVGHTLINNYKDLLAVAIAASYH 256
Query: 239 FEQAKTVKEFLKDPSKF 255
+ + + + + +++P K+
Sbjct: 257 YPEIEDLVDRIENPEKY 273
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ +R ++DV ++ G+KVG SEA+LLN+LNISPF++GL + VYD+G +F ILD
Sbjct: 144 KIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTFGLTVVQVYDNGQVFPSSILD 203
Query: 335 IRPEDLRVKFL 345
I E+L F+
Sbjct: 204 ITDEELVSHFV 214
>sp|P29764|RLA0_CHERU 60S acidic ribosomal protein P0 OS=Chenopodium rubrum PE=2 SV=1
Length = 321
Score = 234 bits (596), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/224 (51%), Positives = 157/224 (70%), Gaps = 4/224 (1%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEH--NPGLE 58
QL+DEY + + ADNVGS Q Q IR L G +VLMGKNTMM+++IR H E+ N L
Sbjct: 20 QLLDEYSQVLIASADNVGSNQLQAIRIGLRGDSIVLMGKNTMMKRSIRLHAENTGNENLR 79
Query: 59 RLLPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTS 118
+ NVG +FT+GDLN+VRE++ + KV APAR G +AP V +P NTGL P +TS
Sbjct: 80 NVEQLFLPNVGLIFTKGDLNQVREEISKYKVGAPARFGLVAPIDVVVPPGNTGLDPSQTS 139
Query: 119 FFQALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSG 176
FFQ L+IPTKI+KGT+EII V ++K+G+ S EA LL L I PFSYGL ++ VYD G
Sbjct: 140 FFQVLNIPTKINKGTVEIITAVELIKKGEKVGSSEAALLAKLGIRPFSYGLNVESVYDDG 199
Query: 177 TIFAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHS 220
++F+P++LD+ +DL +F GV+ + S+ L+I YPT+A+ PHS
Sbjct: 200 SVFSPEVLDLTEDDLLARFATGVSMVTSLSLAISYPTLAAAPHS 243
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 44/58 (75%)
Query: 287 VHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKF 344
V ++K+G+KVG SEA LL L I PFSYGL ++ VYD G++F+P++LD+ +DL +F
Sbjct: 161 VELIKKGEKVGSSEAALLAKLGIRPFSYGLNVESVYDDGSVFSPEVLDLTEDDLLARF 218
>sp|P22685|RLA0_DICDI 60S acidic ribosomal protein P0 OS=Dictyostelium discoideum
GN=rplp0 PE=1 SV=2
Length = 305
Score = 223 bits (568), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/248 (46%), Positives = 161/248 (64%), Gaps = 5/248 (2%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
+L Y K V AD VGS Q Q IR+S+ G+G VLMGK TM+RK IR + P L+ L
Sbjct: 18 KLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIRDLADSKPELDAL 77
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
++K N +F + ++ EV+ + +V APA+ G AP V IPA TG+ P +TSF
Sbjct: 78 NTYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIPAGPTGMEPTQTSFL 137
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTI 178
Q L I TKI++G I+I+N+VHI+K G + EATLL LNI PF+YGL K++YD+G
Sbjct: 138 QDLKIATKINRGQIDIVNEVHIIKTGQKVGASEATLLQKLNIKPFTYGLEPKIIYDAGAC 197
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
++P I + EDL KF +G+ +A++ L IGYPTVAS+PHS++N FKN+LA++ T
Sbjct: 198 YSPSISE---EDLINKFKQGIFNIAAISLEIGYPTVASIPHSVMNAFKNLLAISFETSYT 254
Query: 239 FEQAKTVK 246
F+ A+ K
Sbjct: 255 FDAAEKFK 262
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 57/98 (58%), Gaps = 8/98 (8%)
Query: 252 PSKFLAAAAPAAAAPAASNRSEE-----RFSRNAETDLNDVHILKEGDKVGPSEATLLNM 306
P+ + A P P ++ ++ + +R +N+VHI+K G KVG SEATLL
Sbjct: 117 PNDVIIPAGPTGMEPTQTSFLQDLKIATKINRGQIDIVNEVHIIKTGQKVGASEATLLQK 176
Query: 307 LNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKF 344
LNI PF+YGL K++YD+G ++P I + EDL KF
Sbjct: 177 LNIKPFTYGLEPKIIYDAGACYSPSISE---EDLINKF 211
>sp|Q94660|RLA0_PLAF8 60S acidic ribosomal protein P0 OS=Plasmodium falciparum (isolate
7G8) GN=RPLP0 PE=2 SV=2
Length = 316
Score = 214 bits (544), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/254 (43%), Positives = 167/254 (65%), Gaps = 4/254 (1%)
Query: 2 LVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERLL 61
L+ +Y K +V DNVGS Q ++R+SL G +LMGKNT +R A++ +L+ P +E+LL
Sbjct: 20 LIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTRIRTALKKNLQAVPQIEKLL 79
Query: 62 PHIKGNVGFVFTRGDLNEVREKLLENKVQA-PARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
P +K N+GFVF + DL+E+R +L+NK + PAR G IAP V IP TG+ P TSF
Sbjct: 80 PLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLGVIAPIDVFIPPGPTGMDPSHTSFL 139
Query: 121 QALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSGTI 178
++L I TKI KG IEI VH++K+G+ ++ ATLL N++P SYG+ ++ VYD G I
Sbjct: 140 ESLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLRKFNMNP-SYGVDVRTVYDDGVI 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
+ ++LDI ED+ KF +GV+ +A++ + G T AS PH V FKN++A+ ++
Sbjct: 199 YDAKVLDITDEDILEKFSKGVSNVAALSRATGVITEASYPHVFVEAFKNIVALIIDSDYT 258
Query: 239 FEQAKTVKEFLKDP 252
F K +K+++++P
Sbjct: 259 FPLMKILKKWVENP 272
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 287 VHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKF 344
VH++K+G+KV S ATLL N++P SYG+ ++ VYD G I+ ++LDI ED+ KF
Sbjct: 159 VHLIKQGEKVTASSATLLRKFNMNP-SYGVDVRTVYDDGVIYDAKVLDITDEDILEKF 215
>sp|P26796|RLA0_TRYCR 60S acidic ribosomal protein P0 OS=Trypanosoma cruzi PE=2 SV=2
Length = 323
Score = 186 bits (473), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/250 (39%), Positives = 154/250 (61%), Gaps = 15/250 (6%)
Query: 5 EYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLE-----------H 53
+Y + DNV S+Q ++R+ L GLG ++MGK T+ +K + E +
Sbjct: 21 KYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVERRAEDKKASAYDKLLY 80
Query: 54 NPGLERLLPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLG 113
N +E+ L + GN +FT ++ + L +++VQAPAR GAIAPC V +PA NTG+
Sbjct: 81 NTCIEKKL--LCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAPCDVIVPAGNTGME 138
Query: 114 PEKTSFFQALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKM 171
P+ TSFFQAL+I TKI+KGT+EI++D +L GD + ATLL L+ISPF Y + ++
Sbjct: 139 PKATSFFQALNIATKIAKGTVEIVSDKKVLSVGDRVDNSTATLLQKLDISPFYYQVEVQS 198
Query: 172 VYDSGTIFAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAV 231
V+D G +F + L I + + LEG++ +A++ L G PT A++PH I++ FK +L
Sbjct: 199 VWDRGMLFLREDLSITDDVVEKYLLEGISNVAALSLGAGIPTAATLPHMIMDAFKTLLGA 258
Query: 232 AAATEVDFEQ 241
+ ATE +F++
Sbjct: 259 SVATEYEFDE 268
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 284 LNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVK 343
++D +L GD+V S ATLL L+ISPF Y + ++ V+D G +F + L I +D+ K
Sbjct: 162 VSDKKVLSVGDRVDNSTATLLQKLDISPFYYQVEVQSVWDRGMLFLREDLSI-TDDVVEK 220
Query: 344 FL 345
+L
Sbjct: 221 YL 222
>sp|Q967Y7|RLA0_EIMTE 60S acidic ribosomal protein P0 OS=Eimeria tenella PE=2 SV=1
Length = 314
Score = 186 bits (473), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/253 (44%), Positives = 162/253 (64%), Gaps = 2/253 (0%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QLV E+P+ VV AD+VGS+Q IR +L G VLMGKNT +R A+R L+ P L+ L
Sbjct: 18 QLVLEHPRVLVVSADHVGSKQLAGIRVALRGQATVLMGKNTKIRTALRQQLQQQPQLQAL 77
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LP ++ NVGF+F R D VR + ++KV APA+ G AP V IPA TG+ P T FF
Sbjct: 78 LPLVRLNVGFIFCRADPAAVRAVVQQHKVPAPAKQGVTAPTDVFIPAGPTGMDPGSTGFF 137
Query: 121 QALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL I TKI KG IEI V +++ G+ S+ ATLL+ L++ PF+YGL ++ VYD+G++
Sbjct: 138 QALGISTKIVKGQIEIQQAVQLIRRGERVSASAATLLHKLSVKPFTYGLKVEHVYDNGSV 197
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
++ +LDI E + F G A +A+V ++G P+ A+ PHSI+ F+N A+ T
Sbjct: 198 YSASVLDITDEQILEAFAAGAANVAAVSRAVGLPSAAAAPHSILEAFRNCAALCLDTPFC 257
Query: 239 FEQAKTVKEFLKD 251
F Q + +KE +++
Sbjct: 258 FPQMQRLKEMVEN 270
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 40/54 (74%)
Query: 287 VHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDL 340
V +++ G++V S ATLL+ L++ PF+YGL ++ VYD+G++++ +LDI E +
Sbjct: 157 VQLIRRGERVSASAATLLHKLSVKPFTYGLKVEHVYDNGSVYSASVLDITDEQI 210
>sp|P39096|RLA0_LEICH 60S acidic ribosomal protein P0 OS=Leishmania chagasi GN=LCP0 PE=3
SV=1
Length = 322
Score = 164 bits (414), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 145/255 (56%), Gaps = 15/255 (5%)
Query: 1 QLVD---EYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGL 57
+LVD +Y VG DNV S+Q ++R+ G +MGK T+ K + +
Sbjct: 14 RLVDCLTKYSCVLFVGMDNVRSQQVHDVRRGCRGKAEFIMGKKTLQAKIVEKRAQAKDAS 73
Query: 58 ERLLPH---------IKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQ 108
P + GN G +FT + E+ L ++V+APAR GAI PC V +PA
Sbjct: 74 PEAKPFNDQCEEYNLLSGNTGLIFTNNAVQEITSVLDGHRVKAPARVGAI-PCDVVVPAG 132
Query: 109 NTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYG 166
+TG+ P +TSFFQAL+I TKI+KG +EI+ + +L GD + ATLL LNISPF Y
Sbjct: 133 STGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLSVGDKVDNSTATLLQKLNISPFYYQ 192
Query: 167 LIIKMVYDSGTIFAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFK 226
+ + V+D G +F + L + + + +EG++ +A++ L G PT +++ +V+ FK
Sbjct: 193 VNVLSVWDRGVLFTREDLMMTEDMVEKMLMEGLSNVAAMALGAGIPTSSTIGPMLVDAFK 252
Query: 227 NVLAVAAATEVDFEQ 241
N+LAV+ AT +FE+
Sbjct: 253 NLLAVSVATSYEFEE 267
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 289 ILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKFL 345
+L GDKV S ATLL LNISPF Y + + V+D G +F + L + ED+ K L
Sbjct: 166 VLSVGDKVDNSTATLLQKLNISPFYYQVNVLSVWDRGVLFTREDL-MMTEDMVEKML 221
>sp|Q8SRJ7|RLA0_ENCCU 60S acidic ribosomal protein P0 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPP0 PE=1 SV=1
Length = 290
Score = 160 bits (405), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 141/234 (60%), Gaps = 4/234 (1%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
+L + Y + +V +NV S Q ++I++ G +LMGKN+ +R+AI P L +
Sbjct: 43 KLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLMGKNSAIRRAIADL--GKPELSGV 100
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
+KG+V FVF +G+ ++++ + EN +A A+ G +A V + + TG+ P+KTS+F
Sbjct: 101 YDLVKGDVCFVFFKGNARDIKKAIDENVREACAKVGNVAQRDVWVESCITGMTPDKTSYF 160
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDSS--REATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL I TKI+KG +EII+ +L EGD +A LL MLNI PF Y + + +Y+ G I
Sbjct: 161 QALGIATKITKGKVEIISPYKVLSEGDKVGPSQANLLGMLNIKPFCYKMTMHQIYEDGVI 220
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVA 232
+ ++DI ED+ ++T+A+ L G T AS+P+++ N FK++L V+
Sbjct: 221 YDSSLIDIGEEDIFTSLRNAISTVAAASLGAGVITQASMPYNVRNAFKDILHVS 274
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 289 ILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDL 340
+L EGDKVGPS+A LL MLNI PF Y + + +Y+ G I+ ++DI ED+
Sbjct: 182 VLSEGDKVGPSQANLLGMLNIKPFCYKMTMHQIYEDGVIYDSSLIDIGEEDI 233
>sp|P39097|RLA0_LEIIN 60S acidic ribosomal protein P0 OS=Leishmania infantum GN=LIPO-A
PE=3 SV=1
Length = 323
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 144/256 (56%), Gaps = 16/256 (6%)
Query: 1 QLVD---EYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLE----- 52
+LVD +Y VG DNV S+Q ++ ++L +MGK T+ K + +
Sbjct: 14 RLVDCLTKYSCVLFVGMDNVRSQQVHDVGRALRAKAEFMMGKKTLQGKIVEKRAQAKDAS 73
Query: 53 -----HNPGLERLLPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPA 107
N E + GN G +FT + E+ L ++V+ AR GAI+PC V + A
Sbjct: 74 PEAKHFNDQCEEY-NLLSGNTGLIFTNNAVQEITSVLDAHRVKRAARVGAISPCDVIVAA 132
Query: 108 QNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSY 165
+TG+ P +TSFFQAL+I TKI+KG +EI+ + +L GD + ATLL LNISPF Y
Sbjct: 133 GSTGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLSVGDKVDNSTATLLQKLNISPFYY 192
Query: 166 GLIIKMVYDSGTIFAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGF 225
+ + V+D G +F + L + + + +EG++ +A++ L G PT +++ +V+ F
Sbjct: 193 QVNVLSVWDRGVLFTREDLMMTEDMVEKMLMEGLSNVAAMALGAGIPTSSTIGPMLVDAF 252
Query: 226 KNVLAVAAATEVDFEQ 241
KN+LAV+ AT +FE+
Sbjct: 253 KNLLAVSVATSYEFEE 268
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 289 ILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKFL 345
+L GDKV S ATLL LNISPF Y + + V+D G +F + L + ED+ K L
Sbjct: 167 VLSVGDKVDNSTATLLQKLNISPFYYQVNVLSVWDRGVLFTREDL-MMTEDMVEKML 222
>sp|Q3INI7|RLA0_NATPD Acidic ribosomal protein P0 homolog OS=Natronomonas pharaonis
(strain DSM 2160 / ATCC 35678) GN=rplP0 PE=3 SV=1
Length = 354
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 8/240 (3%)
Query: 2 LVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERLL 61
++ Y VV + SRQ Q++R+ L G + + +NT+M +A+ E GL L+
Sbjct: 25 FLERYESVGVVDITGIPSRQLQDMRRDLHGTAALRVSRNTLMERALN---EGGDGLGELV 81
Query: 62 PHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEK-TSFF 120
H++G VG + T + + ++L E+K AP G +AP + IP +TG+ P
Sbjct: 82 EHVEGQVGLIGTNDNPFGLYQQLEESKTPAPINAGEVAPNDIVIPEGDTGVDPGPFVGDL 141
Query: 121 QALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSGTI 178
Q + +I G+I+++ D +L G+ SS + +L+ L I P GL ++ V G +
Sbjct: 142 QQVGANARIEGGSIKVVEDSTVLSAGEEVSSDLSNVLSELGIEPKEVGLDLRGVSSEGVL 201
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVN--GFKNVLAVAAATE 236
F+P+ LDI E R + ++ ++ YPT + P + G + ++AA E
Sbjct: 202 FSPEELDIDVESYRTDIESAASAARNLSVNAEYPTARTAPSMLAKAAGEAKSVGLSAAVE 261
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 284 LNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVK 343
+ D +L G++V + +L+ L I P GL ++ V G +F+P+ LDI E R
Sbjct: 158 VEDSTVLSAGEEVSSDLSNVLSELGIEPKEVGLDLRGVSSEGVLFSPEELDIDVESYRTD 217
Query: 344 F 344
Sbjct: 218 I 218
>sp|P13553|RLA0_HALSA Acidic ribosomal protein P0 homolog OS=Halobacterium salinarum
(strain ATCC 700922 / JCM 11081 / NRC-1) GN=rplP0 PE=3
SV=1
Length = 352
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 118/226 (52%), Gaps = 6/226 (2%)
Query: 2 LVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERLL 61
L++ Y VV + S+Q Q++R+ L G + M +NT++ +A+ E GL+ L
Sbjct: 26 LLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVRALE---EAGDGLDTLT 82
Query: 62 PHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEK-TSFF 120
+++G VG V T + + ++L +K AP G +AP + +P +TG+ P
Sbjct: 83 EYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDTGIDPGPFVGEL 142
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDSSRE--ATLLNMLNISPFSYGLIIKMVYDSGTI 178
Q + +I +G+I++++D + +EG++ + + +L+ L I P GL ++ V+ G +
Sbjct: 143 QTIGANARIQEGSIQVLDDSVVTEEGETVSDDVSNVLSELGIEPKEVGLDLRGVFSEGVL 202
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNG 224
F P+ L+I ++ R A+ ++ ++ YPT + P I G
Sbjct: 203 FTPEELEIDVDEYRADIQSAAASARNLSVNAAYPTERTAPDLIAKG 248
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 284 LNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVK 343
L+D + +EG+ V + +L+ L I P GL ++ V+ G +F P+ L+I ++ R
Sbjct: 159 LDDSVVTEEGETVSDDVSNVLSELGIEPKEVGLDLRGVFSEGVLFTPEELEIDVDEYRAD 218
Query: 344 F 344
Sbjct: 219 I 219
>sp|B0R4W1|RLA0_HALS3 Acidic ribosomal protein P0 homolog OS=Halobacterium salinarum
(strain ATCC 29341 / DSM 671 / R1) GN=rplP0 PE=3 SV=1
Length = 352
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 118/226 (52%), Gaps = 6/226 (2%)
Query: 2 LVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERLL 61
L++ Y VV + S+Q Q++R+ L G + M +NT++ +A+ E GL+ L
Sbjct: 26 LLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVRALE---EAGDGLDTLT 82
Query: 62 PHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEK-TSFF 120
+++G VG V T + + ++L +K AP G +AP + +P +TG+ P
Sbjct: 83 EYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDTGIDPGPFVGEL 142
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDSSRE--ATLLNMLNISPFSYGLIIKMVYDSGTI 178
Q + +I +G+I++++D + +EG++ + + +L+ L I P GL ++ V+ G +
Sbjct: 143 QTIGANARIQEGSIQVLDDSVVTEEGETVSDDVSNVLSELGIEPKEVGLDLRGVFSEGVL 202
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNG 224
F P+ L+I ++ R A+ ++ ++ YPT + P I G
Sbjct: 203 FTPEELEIDVDEYRADIQSAAASARNLSVNAAYPTERTAPDLIAKG 248
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 284 LNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVK 343
L+D + +EG+ V + +L+ L I P GL ++ V+ G +F P+ L+I ++ R
Sbjct: 159 LDDSVVTEEGETVSDDVSNVLSELGIEPKEVGLDLRGVFSEGVLFTPEELEIDVDEYRAD 218
Query: 344 F 344
Sbjct: 219 I 219
>sp|P41198|RLA0_HALVD Acidic ribosomal protein P0 homolog OS=Haloferax volcanii (strain
ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB
2012 / VKM B-1768 / DS2) GN=rplP0 PE=3 SV=2
Length = 348
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 110/233 (47%), Gaps = 6/233 (2%)
Query: 2 LVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERLL 61
++ Y VVG + SRQ Q++R+ L G V M +NT++ +A+ E N G E L
Sbjct: 26 FIESYESVGVVGVAGIPSRQLQSMRRELHGSAAVRMSRNTLVNRALD---EVNDGFEELK 82
Query: 62 PHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEK-TSFF 120
+I G V + T + + ++L +K AP G +AP + IP +TG+ P
Sbjct: 83 EYIAGQVALIGTNDNPFALFKELEASKTPAPINAGEVAPNDIVIPEGDTGVDPGPFVGEL 142
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDSSRE--ATLLNMLNISPFSYGLIIKMVYDSGTI 178
Q + +I G+I + D ++L EG+ E A +L L I P GL ++ V+ G +
Sbjct: 143 QQVGASARIMDGSIMVTEDSNVLSEGEEVSEELANVLAELGIEPKEVGLDLRGVFSEGVL 202
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAV 231
F P L I ++ R V+ ++ ++ YPT + P I AV
Sbjct: 203 FEPDELAIDVDEYRADIQSAVSAATNLSVNAVYPTAQTAPTLIAKATSEAKAV 255
Score = 36.6 bits (83), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 286 DVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLR 341
D ++L EG++V A +L L I P GL ++ V+ G +F P L I ++ R
Sbjct: 161 DSNVLSEGEEVSEELANVLAELGIEPKEVGLDLRGVFSEGVLFEPDELAIDVDEYR 216
>sp|Q9Y8J3|RLA0_METVO Acidic ribosomal protein P0 homolog (Fragment) OS=Methanococcus
voltae GN=rplP0 PE=3 SV=1
Length = 297
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 113/221 (51%), Gaps = 5/221 (2%)
Query: 17 VGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEH--NPGLERLLPHIKGNVGFVFTR 74
V S Q Q IR ++ + M +NT+M++AI E NP +L+ ++ + T
Sbjct: 39 VPSVQLQEIRDTIRDSMTLKMSRNTLMKRAIEEVAEETGNPSFTKLIDCMEKGAALIATE 98
Query: 75 GDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEK-TSFFQALSIPTKISKGT 133
+ ++ + L E+K AP + GA APC + I A +TG+ P S +A+ +P I KG
Sbjct: 99 MNPFKLYKTLNESKSPAPIKAGATAPCDIEIKAGSTGMPPGPFLSELKAVGLPAAIEKGK 158
Query: 134 IEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDL 191
I I D + KEGD S++ A +L+ L+I P GL + VY+ G ++ P+IL I ++
Sbjct: 159 IGIKEDTIVAKEGDVVSAKLAVVLSKLDIKPMEVGLNVLGVYEDGIVYDPEILKIDEDEF 218
Query: 192 RVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVA 232
K ++ ++ PT A++ + F N AV+
Sbjct: 219 LAKLQSAYTGAFNLSVNAVIPTSATIETIVQKAFSNAKAVS 259
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 286 DVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKF 344
D + KEGD V A +L+ L+I P GL + VY+ G ++ P+IL I ++ K
Sbjct: 164 DTIVAKEGDVVSAKLAVVLSKLDIKPMEVGLNVLGVYEDGIVYDPEILKIDEDEFLAKL 222
>sp|B6YSX9|RLA0_THEON Acidic ribosomal protein P0 homolog OS=Thermococcus onnurineus
(strain NA1) GN=rplP0 PE=3 SV=1
Length = 339
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 123/255 (48%), Gaps = 13/255 (5%)
Query: 2 LVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEH--NPGLER 59
++ YP +V NV + +R+ L G ++ + +NT++ AI+ + P LE+
Sbjct: 18 IIKSYPVIALVDVANVPAYPLSKMREKLRGKALLRVSRNTLIELAIKRAAQELGKPELEK 77
Query: 60 LLPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEK-TS 118
L+ HI+G G + T + ++ + L E+K APA+ G P V IPA T + P
Sbjct: 78 LIDHIQGGAGILATEMNPFKLYKLLEESKTPAPAKPGVPVPRDVVIPAGPTSISPGPLVG 137
Query: 119 FFQALSIPTKISKGTIEIINDVHILKEGDSSRE--ATLLNMLNISPFSYGLIIKMVYDSG 176
QAL IP +I KG + I D +LK G+ E A +LN L I P GL + Y+ G
Sbjct: 138 EMQALGIPARIEKGKVSIQKDYTVLKAGEVITEQLARILNALGIEPLEVGLNLLAAYEDG 197
Query: 177 TIFAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGF---KNVLAVAA 233
++ P++L I E+ + ++ ++ YPT ++ I + KNV
Sbjct: 198 IVYTPEVLAIDEEEYINLLQQAYMHAFNLSVNTAYPTSQTIEAIIQKAYLGAKNV----- 252
Query: 234 ATEVDFEQAKTVKEF 248
A E + +TV++
Sbjct: 253 AVEAGYITPETVEDI 267
Score = 40.0 bits (92), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
R + + D +LK G+ + A +LN L I P GL + Y+ G ++ P++L
Sbjct: 147 RIEKGKVSIQKDYTVLKAGEVITEQLARILNALGIEPLEVGLNLLAAYEDGIVYTPEVLA 206
Query: 335 IRPED 339
I E+
Sbjct: 207 IDEEE 211
>sp|Q5JH36|RLA0_PYRKO Acidic ribosomal protein P0 homolog OS=Pyrococcus kodakaraensis
(strain ATCC BAA-918 / JCM 12380 / KOD1) GN=rplP0 PE=3
SV=1
Length = 340
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 123/256 (48%), Gaps = 15/256 (5%)
Query: 2 LVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEH--NPGLER 59
++ YP +V V + +R L G ++ + +NT++ AI+ + P LE+
Sbjct: 18 IIKSYPVIALVDVAGVPAYPLSKMRDKLRGKALLRVSRNTLIELAIKRAAQELGQPELEK 77
Query: 60 LLPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEK-TS 118
L+ HI+G + T + ++ + L E+K APA+ GA+ P V IPA T L P
Sbjct: 78 LIDHIQGGAAILATEMNPFKLYKLLEESKTPAPAKAGAVVPKDVVIPAGPTSLAPGPLVG 137
Query: 119 FFQALSIPTKISKGTIEIINDVHILKEGDSSRE--ATLLNMLNISPFSYGLIIKMVYDSG 176
QAL IP +I KG + I D +LK G+ E A +LN L I P GL + Y+ G
Sbjct: 138 EMQALGIPARIEKGKVSIQKDYTVLKAGEVITEQLARILNALGIEPLEVGLNLLAAYEDG 197
Query: 177 TIFAPQILDIRPEDLRVKFLEGVATLA-SVCLSIGYP---TVASVPHSIVNGFKNVLAVA 232
++ P +L I E + L+ A ++ ++I YP T+ ++ G KNV
Sbjct: 198 IVYTPDVLAID-ESEYINMLQKAYMHAFNLSVNIAYPTKQTIEAILQKAYLGAKNV---- 252
Query: 233 AATEVDFEQAKTVKEF 248
A E + TV++
Sbjct: 253 -AVEAGYITKDTVEDI 267
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
R + + D +LK G+ + A +LN L I P GL + Y+ G ++ P +L
Sbjct: 147 RIEKGKVSIQKDYTVLKAGEVITEQLARILNALGIEPLEVGLNLLAAYEDGIVYTPDVLA 206
Query: 335 I 335
I
Sbjct: 207 I 207
>sp|O52705|RLA0_METTL Acidic ribosomal protein P0 homolog OS=Methanococcus
thermolithotrophicus GN=rplP0 PE=3 SV=1
Length = 338
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 122/250 (48%), Gaps = 8/250 (3%)
Query: 16 NVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEH--NPGLERLLPHIKGNVGFVFT 73
V +RQ Q IR + G + M +NT++ +AI+ E NP +L +I + T
Sbjct: 38 EVPARQLQEIRDKIRGTMTLKMSRNTLIERAIKEVAEETGNPEFAKLADYIDKGAAIITT 97
Query: 74 RGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEK-TSFFQALSIPTKISKG 132
+ ++ + L E+K AP + GA+APC + + A +TG+ P +++ IP I KG
Sbjct: 98 DMNPFKLYKTLEESKSPAPIKGGAVAPCDIEVKAGSTGMPPGPFLGELKSVGIPAAIEKG 157
Query: 133 TIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPED 190
I I D + K G+ S + A +L+ L I P + GL + Y+ G I+ P +L I E+
Sbjct: 158 KIGIKEDKVVAKAGEVVSHKLAVVLSALGIKPVTVGLNLLAAYEDGVIYTPDVLKIDEEE 217
Query: 191 LRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVDFEQAKTVKEFL- 249
K + + ++ ++ PT ++ + F N AV + E F KT + L
Sbjct: 218 FVQKIQDAYSKAFNLSVNAAIPTAQTIETLLQKAFANARAV--SIESAFLTEKTTDDILG 275
Query: 250 KDPSKFLAAA 259
K S+ LA A
Sbjct: 276 KAYSQMLAVA 285
>sp|P15825|RLA0_HALMA 50S ribosomal protein L10E OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rplP0 PE=1
SV=2
Length = 348
Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 123/241 (51%), Gaps = 8/241 (3%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
++++ Y VV + SRQ Q++R+ L G + + +NT++ +A+ + + GLE L
Sbjct: 25 EMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERALD---DVDDGLEDL 81
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEK-TSF 119
+I G VG + T + + ++L +K AP G +AP + IP +TG+ P
Sbjct: 82 NGYITGQVGLIGTDDNPFSLFQELEASKTPAPIGAGEVAPNDIVIPEGDTGVDPGPFVGE 141
Query: 120 FQALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSGT 177
Q++ +I +G+I++++D +L G+ S + +LN L I P GL ++ V+ G
Sbjct: 142 LQSVGADARIQEGSIQVLSDSTVLDTGEEVSQELSNVLNELGIEPKEVGLDLRAVFADGV 201
Query: 178 IFAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNV--LAVAAAT 235
+F P+ L++ ++ R ++ ++ YPT + P + + N LA+ AA
Sbjct: 202 LFEPEELELDIDEYRSDIQAAAGRAFNLSVNADYPTATTAPTMLQSARGNAKSLALQAAI 261
Query: 236 E 236
E
Sbjct: 262 E 262
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 284 LNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLR 341
L+D +L G++V + +LN L I P GL ++ V+ G +F P+ L++ ++ R
Sbjct: 159 LSDSTVLDTGEEVSQELSNVLNELGIEPKEVGLDLRAVFADGVLFEPEELELDIDEYR 216
>sp|Q8TX50|RLA0_METKA Acidic ribosomal protein P0 homolog OS=Methanopyrus kandleri
(strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
GN=rplP0 PE=3 SV=2
Length = 357
Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 96/183 (52%), Gaps = 4/183 (2%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSL-EGLGVVLMGKNTMMRKAIRGHLEHNPGLER 59
+L+DEY +V + + + Q Q IR L E ++ M +NT+MR A+ L+ P LE
Sbjct: 30 ELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNTLMRIALEEKLDERPELEP 89
Query: 60 LLPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEK-TS 118
LL +I+G V F+FT D ++ + L E+K APA+ G IAP + +P T P S
Sbjct: 90 LLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGDIAPEDIVVPEGPTPFEPGPIVS 149
Query: 119 FFQALSIPTKISKGTIEIINDVHILKEGDSSREAT--LLNMLNISPFSYGLIIKMVYDSG 176
Q +P +I G + I D ++KEG+ E T +L L I P G+ I + G
Sbjct: 150 ELQQAGLPAQIQDGKVVITKDTVLVKEGEEIDEKTAEILKKLEIEPMEVGVDIVAIVAEG 209
Query: 177 TIF 179
T+F
Sbjct: 210 TLF 212
>sp|Q8TZJ8|RLA0_PYRFU Acidic ribosomal protein P0 homolog OS=Pyrococcus furiosus (strain
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=rplP0 PE=1
SV=1
Length = 339
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 140/293 (47%), Gaps = 10/293 (3%)
Query: 2 LVDEYPKCFVVGADNVGSRQFQNIRQSL-EGLGVVLMGKNTMMRKAIRGHLEH--NPGLE 58
L+ YP +V ++ + +R+ + E G++ + +NT++ AI+ + P LE
Sbjct: 18 LIKSYPVVALVDVSSMPAYPLSQMRRLIRENNGLLRVSRNTLIELAIKKVAQELGKPELE 77
Query: 59 RLLPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEK-T 117
+L+ +I+G G + T + ++ + L +N+ APA+ GA P V IPA T L P
Sbjct: 78 KLINYIEGGAGILVTTMNPFKLYKFLQQNRQPAPAKPGAKVPKDVVIPAGPTSLAPGPIV 137
Query: 118 SFFQALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDS 175
QA+ IP +I +G + I D +LK G+ + A +LN L I P GL + VY+
Sbjct: 138 GQMQAMGIPARIERGKVTIQKDTVVLKAGEEITPELANILNALGIQPLEVGLDLLAVYED 197
Query: 176 GTIFAPQILDIRPEDLRVKFLEGVATLA-SVCLSIGYPTVASVPHSIVNGFKNVLAVAAA 234
G I+ P +L I E + L+ A ++ ++I YPT ++ I F N A A A
Sbjct: 198 GIIYTPDVLAID-ESEYINMLQKAYMHAFNLAVNIAYPTPQTIEAIIQKAFLN--AKAVA 254
Query: 235 TEVDFEQAKTVKEFLKDPSKFLAAAAPAAAAPAASNRSEERFSRNAETDLNDV 287
E + +T+ + + + + A +++E S A+ + V
Sbjct: 255 VEAGYITKETISDIIGRAIRAMLLLAQQLPEDVLDEKTKELLSAQAQVSVAQV 307
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
R R T D +LK G+++ P A +LN L I P GL + VY+ G I+ P +L
Sbjct: 148 RIERGKVTIQKDTVVLKAGEEITPELANILNALGIQPLEVGLDLLAVYEDGIIYTPDVLA 207
Query: 335 I 335
I
Sbjct: 208 I 208
>sp|P15826|RLA0_METVS Acidic ribosomal protein P0 homolog OS=Methanococcus vannielii
(strain SB / ATCC 35089 / DSM 1224) GN=rplP0 PE=1 SV=2
Length = 336
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 126/265 (47%), Gaps = 7/265 (2%)
Query: 21 QFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEH--NPGLERLLPHIKGNVGFVFTRGDLN 78
Q Q IR + + M +NT++++A+ E NP +L+ ++ V T +
Sbjct: 43 QLQEIRDKIRDQMTLKMSRNTLIKRAVEEVAEETGNPEFAKLVDYLDKGAAIVVTEMNPF 102
Query: 79 EVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEK-TSFFQALSIPTKISKGTIEII 137
++ + L E+K AP + GAIAPC + + + +TG+ P S +A+ IP I KG I I
Sbjct: 103 KLFKTLEESKSPAPIKGGAIAPCDIEVKSGSTGMPPGPFLSELKAVGIPAAIDKGKIGIK 162
Query: 138 NDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKF 195
D + KEGD S + A +L+ L I P + GL + VY+ G I+ +L I E+ K
Sbjct: 163 EDKVVAKEGDVISPKLAVVLSALGIKPVTVGLNVLGVYEEGVIYTSDVLRIDEEEFLGKL 222
Query: 196 LEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVDFEQAKTVKEFLKDPSKF 255
+ ++ ++ PT A++ + F + AV + E F KT L
Sbjct: 223 QKAYTNAFNLSVNAVIPTSATIETIVQKAFNDAKAV--SVESAFITEKTADAILGKAHAQ 280
Query: 256 LAAAAPAAAAPAASNRSEERFSRNA 280
+ A A A A + +E+ S +A
Sbjct: 281 MIAVAKLAGDEALDDDLKEQISSSA 305
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 286 DVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKF 344
D + KEGD + P A +L+ L I P + GL + VY+ G I+ +L I E+ K
Sbjct: 164 DKVVAKEGDVISPKLAVVLSALGIKPVTVGLNVLGVYEEGVIYTSDVLRIDEEEFLGKL 222
>sp|Q9UXS5|RLA0_PYRAB Acidic ribosomal protein P0 homolog OS=Pyrococcus abyssi (strain
GE5 / Orsay) GN=rplP0 PE=3 SV=1
Length = 341
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 125/254 (49%), Gaps = 8/254 (3%)
Query: 2 LVDEYPKCFVVGADNVGSRQFQNIRQSL-EGLGVVLMGKNTMMRKAIRGHLEH--NPGLE 58
L+ YP +V ++ + +R+ + E G++ + +NT++ AI+ + P LE
Sbjct: 18 LIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAIKKAAQELGKPELE 77
Query: 59 RLLPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEK-T 117
+L +I G + T + ++ + L +N+ APA+ GA+ P V IPA T L P
Sbjct: 78 KLAEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVIPAGPTPLAPGPIV 137
Query: 118 SFFQALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDS 175
QA+ IP +I +G + I D +LK G+ + A +LN L I P GL + VY+
Sbjct: 138 GQMQAMGIPARIERGKVTIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVYED 197
Query: 176 GTIFAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAAT 235
G ++ P +L I ++ + ++ ++I YPT ++ I F N A A A
Sbjct: 198 GIVYTPDVLAIDEQEYIDMVQKAYMHAFNLAVNIAYPTPETIEAIIQKAFLN--AKAVAV 255
Query: 236 EVDFEQAKTVKEFL 249
E + +T+++ L
Sbjct: 256 EAGYITKETIQDIL 269
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
R R T D +LK G+ + P A +LN L I P GL + VY+ G ++ P +L
Sbjct: 148 RIERGKVTIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVYEDGIVYTPDVLA 207
Query: 335 I 335
I
Sbjct: 208 I 208
>sp|O74109|RLA0_PYRHO Acidic ribosomal protein P0 homolog OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=rplP0 PE=1 SV=1
Length = 342
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 124/257 (48%), Gaps = 12/257 (4%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSL-EGLGVVLMGKNTMMRKAIRGHLEH--NPGL 57
+L+ YP +V ++ + +R+ + E G++ + +NT++ AI+ + P L
Sbjct: 17 KLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAIKKAAKELGKPEL 76
Query: 58 ERLLPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEK- 116
E+L+ +I G + T + ++ + L +N+ APA+ GA+ P V +PA T L P
Sbjct: 77 EKLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVVPAGPTPLAPGPI 136
Query: 117 TSFFQALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYD 174
QAL IP +I KG + I D +LK G+ + A +LN L I P GL + VY+
Sbjct: 137 VGQMQALGIPARIEKGKVTIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVYE 196
Query: 175 SGTIFAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAA 234
G ++ P +L I ++ + ++ ++I YPT ++ I F N A
Sbjct: 197 DGIVYTPDVLAIDEQEYIDMLQKAYMHAFNLAVNIAYPTPETIEAIIQKAFLN------A 250
Query: 235 TEVDFEQAKTVKEFLKD 251
V E KE ++D
Sbjct: 251 KTVAIEAGYITKETIQD 267
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
R + T D +LK G+ + P A +LN L I P GL + VY+ G ++ P +L
Sbjct: 148 RIEKGKVTIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVYEDGIVYTPDVLA 207
Query: 335 I 335
I
Sbjct: 208 I 208
>sp|Q6M0L1|RLA0_METMP Acidic ribosomal protein P0 homolog OS=Methanococcus maripaludis
(strain S2 / LL) GN=rplP0 PE=3 SV=1
Length = 335
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 111/217 (51%), Gaps = 5/217 (2%)
Query: 21 QFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEH--NPGLERLLPHIKGNVGFVFTRGDLN 78
Q Q IR + + M +NT+M++AI E NP +L+ ++ + T +
Sbjct: 43 QLQEIRDKIRDQMTLKMSRNTLMKRAIEEVAEETGNPEFAKLVDYMDKGAAIIATEMNPF 102
Query: 79 EVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEK-TSFFQALSIPTKISKGTIEII 137
++ + L E+K AP + GAIAPC + + A +TG+ P S +A+ IP I KG I I
Sbjct: 103 KLYKTLDESKSPAPVKGGAIAPCDIEVKAGSTGMPPGPFLSELKAVGIPAAIDKGKIGIK 162
Query: 138 NDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKF 195
D ++KEG+ S + A +L+ L+I P + GL + VY+ G I+ L I E+ K
Sbjct: 163 EDKIVVKEGEVVSQKLAVVLSALDIKPVTVGLNVLGVYEDGVIYTESDLKIDEEEFVGKI 222
Query: 196 LEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVA 232
+ + ++ ++ PT A+V + F + AV+
Sbjct: 223 QKAYTSAFNLSVNAVIPTSATVETIVQKAFNDAKAVS 259
Score = 35.4 bits (80), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 285 NDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDL 340
D ++KEG+ V A +L+ L+I P + GL + VY+ G I+ L I E+
Sbjct: 163 EDKIVVKEGEVVSQKLAVVLSALDIKPVTVGLNVLGVYEDGVIYTESDLKIDEEEF 218
>sp|A9A838|RLA0_METM6 Acidic ribosomal protein P0 homolog OS=Methanococcus maripaludis
(strain C6 / ATCC BAA-1332) GN=rplP0 PE=3 SV=1
Length = 335
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 124/265 (46%), Gaps = 7/265 (2%)
Query: 21 QFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEH--NPGLERLLPHIKGNVGFVFTRGDLN 78
Q Q IR + + M +NT+M++AI E NP +L ++ + T +
Sbjct: 43 QLQEIRDKIRDQMTLKMSRNTLMKRAIEEVAEETGNPEFAKLADYLDKGAAIIATEMNPF 102
Query: 79 EVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEK-TSFFQALSIPTKISKGTIEII 137
++ + L E+K AP + GA APC + + A +TG+ P S +A+ IP I KG I I
Sbjct: 103 KLFKTLDESKSPAPVKGGATAPCDIEVKAGSTGMPPGPFLSELKAVGIPAAIDKGKIGIK 162
Query: 138 NDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKF 195
D ++KEG+ S + A +L+ L I P + GL + VY+ G I+ L I E+ K
Sbjct: 163 EDKVVIKEGEVVSQKLAVVLSALGIKPVTVGLNVLGVYEDGVIYTESELRIDEEEFIGKI 222
Query: 196 LEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVDFEQAKTVKEFLKDPSKF 255
+ + ++ ++ PT A+V + F + AV + E F KT L
Sbjct: 223 QKAYTSAFNLSVNAVIPTSATVETIVQKAFNDAKAV--SVESAFVTDKTADAILGKAYAQ 280
Query: 256 LAAAAPAAAAPAASNRSEERFSRNA 280
+ A A A+ A +E+ S A
Sbjct: 281 MIAVAGLASDDALDEELKEKISSGA 305
Score = 35.0 bits (79), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 285 NDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDL 340
D ++KEG+ V A +L+ L I P + GL + VY+ G I+ L I E+
Sbjct: 163 EDKVVIKEGEVVSQKLAVVLSALGIKPVTVGLNVLGVYEDGVIYTESELRIDEEEF 218
>sp|C5A428|RLA0_THEGJ Acidic ribosomal protein P0 homolog OS=Thermococcus gammatolerans
(strain DSM 15229 / JCM 11827 / EJ3) GN=rplP0 PE=3 SV=1
Length = 340
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 122/257 (47%), Gaps = 13/257 (5%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAI-RGHLEHN-PGLE 58
+++ +P +V V + +R L G ++ + +NT++ AI R E N P LE
Sbjct: 17 KIIKSHPVIALVDVAGVPAYPLSKMRDKLRGKALLRVSRNTLIELAIKRAAQELNKPDLE 76
Query: 59 RLLPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEK-T 117
+L +I+G + T + ++ + L E+K APA+ GA+ P V IPA T L P
Sbjct: 77 KLADYIEGGAAILATEMNPFKLYKLLEESKTPAPAKPGAVVPKDVVIPAGPTSLAPGPLV 136
Query: 118 SFFQALSIPTKISKGTIEIINDVHILKEGDSSRE--ATLLNMLNISPFSYGLIIKMVYDS 175
QAL IP +I KG + I D +LK G+ E A +LN L I P GL + Y+
Sbjct: 137 GEMQALGIPARIEKGKVTIQKDYTVLKAGEVITEQLARILNALGIEPLEVGLNLLAAYED 196
Query: 176 GTIFAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGF---KNVLAVA 232
I+ P +L I ++ + ++ ++ YPT ++ I + KNV
Sbjct: 197 DIIYTPDVLAIDEQEYINMLQQAYMHAFNLSVNTAYPTKQTIEAIIQKAYLGAKNV---- 252
Query: 233 AATEVDFEQAKTVKEFL 249
A E + +TV++ L
Sbjct: 253 -AVEAGYITPETVEDIL 268
Score = 36.6 bits (83), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
R + T D +LK G+ + A +LN L I P GL + Y+ I+ P +L
Sbjct: 147 RIEKGKVTIQKDYTVLKAGEVITEQLARILNALGIEPLEVGLNLLAAYEDDIIYTPDVLA 206
Query: 335 IRPED 339
I ++
Sbjct: 207 IDEQE 211
>sp|A4FZS8|RLA0_METM5 Acidic ribosomal protein P0 homolog OS=Methanococcus maripaludis
(strain C5 / ATCC BAA-1333) GN=rplP0 PE=3 SV=1
Length = 335
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 110/217 (50%), Gaps = 5/217 (2%)
Query: 21 QFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEH--NPGLERLLPHIKGNVGFVFTRGDLN 78
Q Q IR + + M +NT+M++AI E NP +L+ ++ + T +
Sbjct: 43 QLQEIRDKIRDQMTLKMSRNTLMKRAIEEVAEETGNPEFAKLVDYMDKGAAIIATEMNPF 102
Query: 79 EVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEK-TSFFQALSIPTKISKGTIEII 137
++ + L E+K AP + GA+APC + I A +TG+ P S +A+ +P I KG I I
Sbjct: 103 KLYKTLDESKSPAPVKGGAVAPCDIEIKAGSTGMPPGPFLSELKAVGLPAAIDKGKIGIK 162
Query: 138 NDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKF 195
D ++KEG+ S + + +L+ L I P + GL + VY+ G I+ L I E+ K
Sbjct: 163 EDTVVVKEGEVVSQKLSVVLSALGIKPVTVGLNVLGVYEDGIIYTESDLKIDEEEFIGKI 222
Query: 196 LEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVA 232
+ + ++ ++ PT A+V + F + AV+
Sbjct: 223 QKAYTSAFNLSVNAVIPTSATVETIVQKAFNDAKAVS 259
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 285 NDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDL 340
D ++KEG+ V + +L+ L I P + GL + VY+ G I+ L I E+
Sbjct: 163 EDTVVVKEGEVVSQKLSVVLSALGIKPVTVGLNVLGVYEDGIIYTESDLKIDEEEF 218
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 125,638,631
Number of Sequences: 539616
Number of extensions: 5278251
Number of successful extensions: 16076
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 15745
Number of HSP's gapped (non-prelim): 194
length of query: 346
length of database: 191,569,459
effective HSP length: 118
effective length of query: 228
effective length of database: 127,894,771
effective search space: 29160007788
effective search space used: 29160007788
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)