Your job contains 1 sequence.
>psy17475
QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL
LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF
QALSIPTKISKGTIEIINDVHILKEGDSSREATLLNMLNISPFSYGLIIKMVYDSGTIFA
PQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVDFE
QAKTVKEFLKDPSKFLAAAAPAAAAPAASNRSEERFSRNAETDLNDVHILKEGDKVGPSE
ATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKFLE
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17475
(346 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0000100 - symbol:RpLP0 "Ribosomal protein LP0" spe... 1063 1.7e-107 1
UNIPROTKB|P47826 - symbol:RPLP0 "60S acidic ribosomal pro... 943 8.7e-95 1
RGD|621247 - symbol:Rplp0 "ribosomal protein, large, P0" ... 937 3.8e-94 1
UNIPROTKB|F1PUX4 - symbol:RPLP0 "Uncharacterized protein"... 937 3.8e-94 1
UNIPROTKB|Q29214 - symbol:RPLP0 "60S acidic ribosomal pro... 937 3.8e-94 1
UNIPROTKB|F1MDN4 - symbol:RPLP0 "60S acidic ribosomal pro... 936 4.8e-94 1
UNIPROTKB|Q95140 - symbol:RPLP0 "60S acidic ribosomal pro... 936 4.8e-94 1
UNIPROTKB|P05388 - symbol:RPLP0 "60S acidic ribosomal pro... 936 4.8e-94 1
MGI|MGI:1927636 - symbol:Rplp0 "ribosomal protein, large,... 931 1.6e-93 1
UNIPROTKB|Q8NHW5 - symbol:RPLP0P6 "60S acidic ribosomal p... 917 5.0e-92 1
ZFIN|ZDB-GENE-000629-1 - symbol:rplp0 "ribosomal protein,... 912 1.7e-91 1
UNIPROTKB|F1NB66 - symbol:RPLP0 "60S acidic ribosomal pro... 888 5.9e-89 1
WB|WBGene00004408 - symbol:rla-0 species:6239 "Caenorhabd... 883 2.0e-88 1
UNIPROTKB|F8VU65 - symbol:RPLP0 "60S acidic ribosomal pro... 871 3.7e-87 1
UNIPROTKB|E2RLZ4 - symbol:E2RLZ4 "Uncharacterized protein... 866 1.3e-86 1
UNIPROTKB|F1M2B8 - symbol:F1M2B8 "Uncharacterized protein... 818 1.5e-81 1
UNIPROTKB|F8VW21 - symbol:RPLP0 "60S acidic ribosomal pro... 800 1.2e-79 1
RGD|1564469 - symbol:RGD1564469 "similar to Acidic riboso... 754 9.3e-75 1
UNIPROTKB|Q3B7A4 - symbol:RPLP0 "60S acidic ribosomal pro... 563 8.6e-73 2
TAIR|locus:2074623 - symbol:AT3G11250 species:3702 "Arabi... 732 2.0e-72 1
TAIR|locus:2083564 - symbol:AT3G09200 species:3702 "Arabi... 731 2.5e-72 1
TAIR|locus:2061231 - symbol:AT2G40010 species:3702 "Arabi... 719 4.8e-71 1
ASPGD|ASPL0000036346 - symbol:AN2734 species:162425 "Emer... 718 6.1e-71 1
UNIPROTKB|F8VZS0 - symbol:RPLP0 "60S acidic ribosomal pro... 373 8.6e-71 2
CGD|CAL0001932 - symbol:RPP0 species:5476 "Candida albica... 712 2.6e-70 1
POMBASE|SPCC18.14c - symbol:rpp0 "60S acidic ribosomal pr... 691 4.4e-68 1
SGD|S000004332 - symbol:RPP0 "Conserved ribosomal protein... 673 3.6e-66 1
UNIPROTKB|J9P5Q4 - symbol:J9P5Q4 "Uncharacterized protein... 585 2.6e-63 2
UNIPROTKB|F1LWD6 - symbol:F1LWD6 "Uncharacterized protein... 603 9.3e-59 1
UNIPROTKB|F8VPE8 - symbol:RPLP0 "60S acidic ribosomal pro... 594 8.4e-58 1
GENEDB_PFALCIPARUM|PF11_0313 - symbol:PF11_0313 "ribosoma... 581 2.0e-56 1
UNIPROTKB|Q8II61 - symbol:PF11_0313 "60S ribosomal protei... 581 2.0e-56 1
UNIPROTKB|F8VWS0 - symbol:RPLP0 "60S acidic ribosomal pro... 563 1.6e-54 1
UNIPROTKB|G3V210 - symbol:RPLP0 "60S acidic ribosomal pro... 563 1.6e-54 1
DICTYBASE|DDB_G0286501 - symbol:rplP0 "60S acidic ribosom... 558 5.5e-54 1
UNIPROTKB|F8VRK7 - symbol:RPLP0 "60S acidic ribosomal pro... 519 7.4e-50 1
UNIPROTKB|F8VQY6 - symbol:RPLP0 "60S acidic ribosomal pro... 514 2.5e-49 1
UNIPROTKB|F8VWV4 - symbol:RPLP0 "60S acidic ribosomal pro... 431 1.6e-40 1
UNIPROTKB|F8VS58 - symbol:RPLP0 "60S acidic ribosomal pro... 363 2.5e-33 1
UNIPROTKB|F1LXL8 - symbol:F1LXL8 "Uncharacterized protein... 263 1.0e-22 1
UNIPROTKB|F8W1K8 - symbol:RPLP0 "60S acidic ribosomal pro... 193 5.6e-15 1
FB|FBgn0033485 - symbol:RpLP0-like "Ribosomal protein LP0... 157 2.7e-09 1
UNIPROTKB|F1P353 - symbol:MRTO4 "Uncharacterized protein"... 156 2.9e-09 1
ZFIN|ZDB-GENE-050417-142 - symbol:mrto4 "mRNA turnover 4 ... 155 3.2e-09 1
MGI|MGI:1917152 - symbol:Mrto4 "MRT4, mRNA turnover 4, ho... 153 5.3e-09 1
UNIPROTKB|Q9UKD2 - symbol:MRTO4 "mRNA turnover protein 4 ... 148 2.3e-08 1
UNIPROTKB|G4MVM1 - symbol:MGG_08908 "mRNA turnover protei... 145 7.1e-08 1
UNIPROTKB|A4FV84 - symbol:MRTO4 "mRNA turnover protein 4 ... 143 9.8e-08 1
UNIPROTKB|E2RG17 - symbol:MRTO4 "Uncharacterized protein"... 142 1.3e-07 1
UNIPROTKB|F1SUQ2 - symbol:MRTO4 "Uncharacterized protein"... 140 2.4e-07 1
WB|WBGene00017347 - symbol:F10E7.5 species:6239 "Caenorha... 138 2.5e-07 1
RGD|1311709 - symbol:Mrto4 "mRNA turnover 4 homolog (S. c... 135 3.3e-07 1
UNIPROTKB|F1M7E2 - symbol:F1M7E2 "Uncharacterized protein... 123 3.4e-07 1
TAIR|locus:2032970 - symbol:AT1G25260 "AT1G25260" species... 137 4.9e-07 1
POMBASE|SPBC11G11.03 - symbol:mrt4 "mRNA turnover and rib... 132 2.2e-06 1
SGD|S000001492 - symbol:MRT4 "Protein involved in mRNA tu... 128 6.0e-06 1
UNIPROTKB|J9NSQ8 - symbol:MRTO4 "Uncharacterized protein"... 121 1.6e-05 1
UNIPROTKB|F1M970 - symbol:F1M970 "Uncharacterized protein... 123 2.2e-05 1
DICTYBASE|DDB_G0276411 - symbol:mrt4 "mRNA turnover prote... 118 7.6e-05 1
ASPGD|ASPL0000002010 - symbol:AN6902 species:162425 "Emer... 87 0.00048 2
>FB|FBgn0000100 [details] [associations]
symbol:RpLP0 "Ribosomal protein LP0" species:7227 "Drosophila
melanogaster" [GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA;NAS] [GO:0006412 "translation" evidence=ISS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=NAS] [GO:0005634
"nucleus" evidence=NAS] [GO:0006281 "DNA repair" evidence=NAS]
[GO:0005840 "ribosome" evidence=IDA;NAS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0006414 "translational elongation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IDA]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
GO:GO:0005634 EMBL:AE014296 GO:GO:0005811 GO:GO:0006281
GO:GO:0042254 GO:GO:0005840 GO:GO:0003735 GO:GO:0003906
GO:GO:0006414 eggNOG:COG0244 KO:K02941 CTD:6175
GeneTree:ENSGT00390000017839 OMA:AYMHAFN EMBL:M25772 EMBL:AY075528
EMBL:BT021447 PIR:A30223 RefSeq:NP_524211.1 UniGene:Dm.7933
ProteinModelPortal:P19889 SMR:P19889 DIP:DIP-21968N IntAct:P19889
MINT:MINT-235412 STRING:P19889 PaxDb:P19889 PRIDE:P19889
EnsemblMetazoa:FBtr0078481 EnsemblMetazoa:FBtr0334113 GeneID:40451
KEGG:dme:Dmel_CG7490 FlyBase:FBgn0000100 InParanoid:P19889
OrthoDB:EOG4J6Q6N PhylomeDB:P19889 GenomeRNAi:40451 NextBio:818852
Bgee:P19889 GermOnline:CG7490 Uniprot:P19889
Length = 317
Score = 1063 (379.3 bits), Expect = 1.7e-107, P = 1.7e-107
Identities = 207/290 (71%), Positives = 240/290 (82%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
+L DE+PKCF+VGADNVGS+Q QNIR SL GL VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 ELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKAIRGHLENNPQLEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHIKGNVGFVFT+GDL EVR+KLLE+KV+APAR GAIAP V IPAQNTGLGPEKTSFF
Sbjct: 79 LPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QALSIPTKISKGTIEIINDV ILK GD + EATLLNMLNISPFSYGLI+ VYDSG+I
Sbjct: 139 QALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSI 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
F+P+ILDI+PEDLR KF +GVA LA+VCLS+GYPT+AS PHSI NGFKN+LA+AA TEV+
Sbjct: 199 FSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVE 258
Query: 239 FEQAKTVKEFLKDPSKFLXXXXXXXXXXX--XSNRSEERFSRNAETDLND 286
F++A T+KE++KDPSKF + + EE +E++ D
Sbjct: 259 FKEATTIKEYIKDPSKFAAAASASAAPAAGGATEKKEEAKKPESESEEED 308
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 50/70 (71%), Positives = 58/70 (82%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ S+ +NDV ILK GDKVG SEATLLNMLNISPFSYGLI+ VYDSG+IF+P+ILD
Sbjct: 146 KISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSIFSPEILD 205
Query: 335 IRPEDLRVKF 344
I+PEDLR KF
Sbjct: 206 IKPEDLRAKF 215
>UNIPROTKB|P47826 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 eggNOG:COG0244 HOGENOM:HOG000210987 KO:K02941
HOVERGEN:HBG000711 OrthoDB:EOG4VDQ10 CTD:6175 EMBL:L28704
IPI:IPI00588222 PIR:I50151 RefSeq:NP_990318.1 UniGene:Gga.33624
ProteinModelPortal:P47826 SMR:P47826 STRING:P47826 PRIDE:P47826
GeneID:395835 KEGG:gga:395835 InParanoid:P47826 NextBio:20815903
Uniprot:P47826
Length = 316
Score = 943 (337.0 bits), Expect = 8.7e-95, P = 8.7e-95
Identities = 182/258 (70%), Positives = 214/258 (82%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCFVVGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLDDYPKCFVVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGFVFT+ DL E+R+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCDVTVPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL I TKIS+GTIEI++DV ++K GD + EATLLNMLNISPFS+GL+I+ V+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
+ P++LDI E L +FLEGV +ASVCL IGYPT+ASVPHSIVNG+K VLAVA T+
Sbjct: 199 YNPEVLDITEETLHKRFLEGVRNVASVCLQIGYPTIASVPHSIVNGYKRVLAVAVETDYT 258
Query: 239 FEQAKTVKEFLKDPSKFL 256
F A+ VK FL DPS F+
Sbjct: 259 FPLAEKVKAFLADPSAFV 276
Score = 219 (82.2 bits), Expect = 9.7e-17, P = 9.7e-17
Identities = 42/72 (58%), Positives = 56/72 (77%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ SR L+DV ++K GDKVG SEATLLNMLNISPFS+GL+I+ V+D+G+I+ P++LD
Sbjct: 146 KISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLD 205
Query: 335 IRPEDLRVKFLE 346
I E L +FLE
Sbjct: 206 ITEETLHKRFLE 217
>RGD|621247 [details] [associations]
symbol:Rplp0 "ribosomal protein, large, P0" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006414 "translational elongation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=ISO;ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0071353 "cellular response to
interleukin-4" evidence=ISO] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 RGD:621247 GO:GO:0005634 GO:GO:0005737
GO:GO:0042254 GO:GO:0005840 GO:GO:0003735 GO:GO:0030529
GO:GO:0006414 eggNOG:COG0244 HOGENOM:HOG000210987 KO:K02941
HOVERGEN:HBG000711 OrthoDB:EOG4VDQ10 CTD:6175
GeneTree:ENSGT00390000017839 OMA:AYMHAFN EMBL:X15096 EMBL:Z29530
EMBL:BC062028 IPI:IPI00200147 PIR:S08021 RefSeq:NP_071797.1
UniGene:Rn.1079 ProteinModelPortal:P19945 SMR:P19945 IntAct:P19945
STRING:P19945 PhosphoSite:P19945 PRIDE:P19945
Ensembl:ENSRNOT00000001518 GeneID:64205 KEGG:rno:64205
InParanoid:P19945 NextBio:612910 Genevestigator:P19945
GermOnline:ENSRNOG00000001148 Uniprot:P19945
Length = 317
Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
Identities = 179/257 (69%), Positives = 214/257 (83%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGFVFT+ DL E+R+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL I TKIS+GTIEI++DV ++K GD + EATLLNMLNISPFS+GLII+ V+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSI 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
++P++LDI + L +FLEGV +ASVCL IGYPTVASVPHSI+NG+K VLA++ T+
Sbjct: 199 YSPEVLDITEQALHTRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYT 258
Query: 239 FEQAKTVKEFLKDPSKF 255
F A+ VK FL DPS F
Sbjct: 259 FPLAEKVKAFLADPSAF 275
Score = 221 (82.9 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 42/72 (58%), Positives = 57/72 (79%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ SR L+DV ++K GDKVG SEATLLNMLNISPFS+GLII+ V+D+G+I++P++LD
Sbjct: 146 KISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSIYSPEVLD 205
Query: 335 IRPEDLRVKFLE 346
I + L +FLE
Sbjct: 206 ITEQALHTRFLE 217
>UNIPROTKB|F1PUX4 [details] [associations]
symbol:RPLP0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 KO:K02941 CTD:6175 GeneTree:ENSGT00390000017839
OMA:AYMHAFN EMBL:AAEX03014732 RefSeq:NP_001239066.1
Ensembl:ENSCAFT00000016229 GeneID:609159 KEGG:cfa:609159
Uniprot:F1PUX4
Length = 317
Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
Identities = 180/258 (69%), Positives = 214/258 (82%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGFVFT+ DL E+R+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL I TKIS+GTIEI++DV ++K GD + EATLLNMLNISPFS+GLII+ V+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSI 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
+ P++LDI E L +FLEGV +ASVCL IGYPTVASVPHSI+NG+K VLA++ T+
Sbjct: 199 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYT 258
Query: 239 FEQAKTVKEFLKDPSKFL 256
F A+ VK FL DPS F+
Sbjct: 259 FPLAEKVKAFLADPSAFV 276
Score = 220 (82.5 bits), Expect = 6.8e-17, P = 6.8e-17
Identities = 43/72 (59%), Positives = 56/72 (77%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ SR L+DV ++K GDKVG SEATLLNMLNISPFS+GLII+ V+D+G+I+ P++LD
Sbjct: 146 KISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSIYNPEVLD 205
Query: 335 IRPEDLRVKFLE 346
I E L +FLE
Sbjct: 206 ITEETLHSRFLE 217
>UNIPROTKB|Q29214 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9823
"Sus scrofa" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0005840 "ribosome" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 GO:GO:0005634 GO:GO:0005737 GO:GO:0042254
GO:GO:0005840 GO:GO:0003735 GO:GO:0030529 GO:GO:0006414
eggNOG:COG0244 HOGENOM:HOG000210987 KO:K02941 HOVERGEN:HBG000711
OrthoDB:EOG4VDQ10 EMBL:DQ316319 EMBL:F14800 RefSeq:NP_001092068.1
UniGene:Ssc.53738 ProteinModelPortal:Q29214 SMR:Q29214
STRING:Q29214 GeneID:100049695 KEGG:ssc:100049695
ArrayExpress:Q29214 Uniprot:Q29214
Length = 318
Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
Identities = 180/258 (69%), Positives = 214/258 (82%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGFVFT+ DL E+R+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL I TKIS+GTIEI++DV ++K GD + EATLLNMLNISPFS+GLII+ V+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSI 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
+ P++LDI E L +FLEGV +ASVCL IGYPTVASVPHSI+NG+K VLA++ T+
Sbjct: 199 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYT 258
Query: 239 FEQAKTVKEFLKDPSKFL 256
F A+ VK FL DPS F+
Sbjct: 259 FPLAEKVKAFLADPSAFV 276
Score = 220 (82.5 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 43/72 (59%), Positives = 56/72 (77%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ SR L+DV ++K GDKVG SEATLLNMLNISPFS+GLII+ V+D+G+I+ P++LD
Sbjct: 146 KISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSIYNPEVLD 205
Query: 335 IRPEDLRVKFLE 346
I E L +FLE
Sbjct: 206 ITEETLHSRFLE 217
>UNIPROTKB|F1MDN4 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9913
"Bos taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR001790 Pfam:PF00466
GO:GO:0005634 GO:GO:0042254 GO:GO:0022625 IPI:IPI00703564
GeneTree:ENSGT00390000017839 OMA:AYMHAFN EMBL:DAAA02045445
Ensembl:ENSBTAT00000055086 ArrayExpress:F1MDN4 Uniprot:F1MDN4
Length = 320
Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
Identities = 179/258 (69%), Positives = 214/258 (82%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGFVFT+ DL E+R+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL I TKIS+GTIEI++DV ++K GD + EATLLNMLNISPFS+GL+I+ V+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
+ P++LDI E L +FLEGV +ASVCL IGYPTVASVPHSI+NG+K VLA++ T+
Sbjct: 199 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYT 258
Query: 239 FEQAKTVKEFLKDPSKFL 256
F A+ VK FL DPS F+
Sbjct: 259 FPLAEKVKAFLADPSAFV 276
Score = 219 (82.2 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 42/72 (58%), Positives = 56/72 (77%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ SR L+DV ++K GDKVG SEATLLNMLNISPFS+GL+I+ V+D+G+I+ P++LD
Sbjct: 146 KISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLD 205
Query: 335 IRPEDLRVKFLE 346
I E L +FLE
Sbjct: 206 ITEETLHSRFLE 217
>UNIPROTKB|Q95140 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0030529
"ribonucleoprotein complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005840 "ribosome" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 GO:GO:0005634 GO:GO:0005737 GO:GO:0042254
GO:GO:0005840 GO:GO:0003735 GO:GO:0030529 GO:GO:0006414
eggNOG:COG0244 HOGENOM:HOG000210987 KO:K02941 HOVERGEN:HBG000711
OrthoDB:EOG4VDQ10 EMBL:BT021080 EMBL:BC102074 EMBL:U75275
EMBL:AF013214 IPI:IPI00703564 RefSeq:NP_001012700.1 UniGene:Bt.8462
ProteinModelPortal:Q95140 SMR:Q95140 STRING:Q95140 PRIDE:Q95140
GeneID:286868 KEGG:bta:286868 CTD:6175 NextBio:20806517
Uniprot:Q95140
Length = 318
Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
Identities = 179/258 (69%), Positives = 214/258 (82%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGFVFT+ DL E+R+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL I TKIS+GTIEI++DV ++K GD + EATLLNMLNISPFS+GL+I+ V+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
+ P++LDI E L +FLEGV +ASVCL IGYPTVASVPHSI+NG+K VLA++ T+
Sbjct: 199 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYT 258
Query: 239 FEQAKTVKEFLKDPSKFL 256
F A+ VK FL DPS F+
Sbjct: 259 FPLAEKVKAFLADPSAFV 276
Score = 219 (82.2 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 42/72 (58%), Positives = 56/72 (77%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ SR L+DV ++K GDKVG SEATLLNMLNISPFS+GL+I+ V+D+G+I+ P++LD
Sbjct: 146 KISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLD 205
Query: 335 IRPEDLRVKFLE 346
I E L +FLE
Sbjct: 206 ITEETLHSRFLE 217
>UNIPROTKB|P05388 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006412 "translation"
evidence=NAS;TAS] [GO:0003735 "structural constituent of ribosome"
evidence=NAS] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0003723 "RNA binding" evidence=TAS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006413 "translational initiation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0006415 "translational
termination" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0019058 "viral infectious cycle" evidence=TAS] [GO:0019083
"viral transcription" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR001790
InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466 GO:GO:0005634
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0000184 GO:GO:0006413
GO:GO:0042254 GO:GO:0003723 GO:GO:0003735 GO:GO:0006415
GO:GO:0006414 Reactome:REACT_1762 GO:GO:0006614 GO:GO:0022625
GO:GO:0019083 eggNOG:COG0244 EMBL:AC004263 KO:K02941 HPA:HPA003512
HOVERGEN:HBG000711 OrthoDB:EOG4VDQ10 CTD:6175 OMA:AYMHAFN
EMBL:M17885 EMBL:BC000087 EMBL:BC000345 EMBL:BC000752 EMBL:BC001127
EMBL:BC001834 EMBL:BC003655 EMBL:BC005863 EMBL:BC008092
EMBL:BC008594 EMBL:BC009867 EMBL:BC015173 EMBL:BC015690
EMBL:AB007187 IPI:IPI00008530 PIR:A27125 RefSeq:NP_000993.1
RefSeq:NP_444505.1 UniGene:Hs.546285 ProteinModelPortal:P05388
SMR:P05388 IntAct:P05388 MINT:MINT-193149 STRING:P05388
PhosphoSite:P05388 DMDM:133041 REPRODUCTION-2DPAGE:P05388
PaxDb:P05388 PRIDE:P05388 DNASU:6175 Ensembl:ENST00000228306
Ensembl:ENST00000392514 Ensembl:ENST00000551150 GeneID:6175
KEGG:hsa:6175 UCSC:uc001txp.3 GeneCards:GC12M120634 HGNC:HGNC:10371
MIM:180510 neXtProt:NX_P05388 PharmGKB:PA34772 InParanoid:P05388
PhylomeDB:P05388 ChiTaRS:RPLP0 GenomeRNAi:6175 NextBio:23989
ArrayExpress:P05388 Bgee:P05388 CleanEx:HS_RPLP0
Genevestigator:P05388 GermOnline:ENSG00000089157 Uniprot:P05388
Length = 317
Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
Identities = 179/258 (69%), Positives = 214/258 (82%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGFVFT+ DL E+R+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL I TKIS+GTIEI++DV ++K GD + EATLLNMLNISPFS+GL+I+ V+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
+ P++LDI E L +FLEGV +ASVCL IGYPTVASVPHSI+NG+K VLA++ T+
Sbjct: 199 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYT 258
Query: 239 FEQAKTVKEFLKDPSKFL 256
F A+ VK FL DPS F+
Sbjct: 259 FPLAEKVKAFLADPSAFV 276
Score = 219 (82.2 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 42/72 (58%), Positives = 56/72 (77%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ SR L+DV ++K GDKVG SEATLLNMLNISPFS+GL+I+ V+D+G+I+ P++LD
Sbjct: 146 KISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLD 205
Query: 335 IRPEDLRVKFLE 346
I E L +FLE
Sbjct: 206 ITEETLHSRFLE 217
>MGI|MGI:1927636 [details] [associations]
symbol:Rplp0 "ribosomal protein, large, P0" species:10090
"Mus musculus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0071353 "cellular response to interleukin-4" evidence=IDA]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
MGI:MGI:1927636 GO:GO:0005634 GO:GO:0005737 GO:GO:0042254
GO:GO:0005840 GO:GO:0003735 GO:GO:0030529 GO:GO:0071353
GO:GO:0006414 eggNOG:COG0244 HOGENOM:HOG000210987 KO:K02941
HOVERGEN:HBG000711 OrthoDB:EOG4VDQ10 CTD:6175 OMA:AYMHAFN
EMBL:X15267 EMBL:AK010267 EMBL:AK012606 EMBL:AK029816 EMBL:AK081678
EMBL:BC003833 EMBL:BC011106 EMBL:BC011291 IPI:IPI00314950
PIR:S05305 RefSeq:NP_031501.1 UniGene:Mm.371545 UniGene:Mm.5286
ProteinModelPortal:P14869 SMR:P14869 IntAct:P14869 STRING:P14869
PhosphoSite:P14869 PaxDb:P14869 PRIDE:P14869
Ensembl:ENSMUST00000086519 GeneID:11837 KEGG:mmu:11837
InParanoid:P14869 NextBio:279771 Bgee:P14869 CleanEx:MM_RPLP0
Genevestigator:P14869 GermOnline:ENSMUSG00000067274 Uniprot:P14869
Length = 317
Score = 931 (332.8 bits), Expect = 1.6e-93, P = 1.6e-93
Identities = 179/257 (69%), Positives = 212/257 (82%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGFVFT+ DL E+R+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL I TKIS+GTIEI++DV ++K GD + EATLLNMLNISPFS+GLII+ V+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSI 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
+ P++LDI + L +FLEGV +ASVCL IGYPTVASVPHSI+NG+K VLA++ TE
Sbjct: 199 YNPEVLDITEQALHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETEYT 258
Query: 239 FEQAKTVKEFLKDPSKF 255
F + VK FL DPS F
Sbjct: 259 FPLTEKVKAFLADPSAF 275
Score = 216 (81.1 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 42/72 (58%), Positives = 56/72 (77%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ SR L+DV ++K GDKVG SEATLLNMLNISPFS+GLII+ V+D+G+I+ P++LD
Sbjct: 146 KISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSIYNPEVLD 205
Query: 335 IRPEDLRVKFLE 346
I + L +FLE
Sbjct: 206 ITEQALHSRFLE 217
>UNIPROTKB|Q8NHW5 [details] [associations]
symbol:RPLP0P6 "60S acidic ribosomal protein P0-like"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006414 "translational elongation"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428
Pfam:PF00466 GO:GO:0005737 EMBL:CH471053 GO:GO:0042254
GO:GO:0005840 GO:GO:0003735 GO:GO:0006414 eggNOG:COG0244
HOGENOM:HOG000210987 EMBL:AY064377 EMBL:CR596098 IPI:IPI00871646
ProteinModelPortal:Q8NHW5 SMR:Q8NHW5 IntAct:Q8NHW5
MINT:MINT-1143683 STRING:Q8NHW5 PhosphoSite:Q8NHW5 DMDM:74723863
PaxDb:Q8NHW5 PRIDE:Q8NHW5 GeneCards:GC02P038709 H-InvDB:HIX0029989
H-InvDB:HIX0161916 HGNC:HGNC:36404 HPA:HPA003512 neXtProt:NX_Q8NHW5
HOVERGEN:HBG000711 InParanoid:Q8NHW5 OrthoDB:EOG4VDQ10
PhylomeDB:Q8NHW5 ArrayExpress:Q8NHW5 Genevestigator:Q8NHW5
Uniprot:Q8NHW5
Length = 317
Score = 917 (327.9 bits), Expect = 5.0e-92, P = 5.0e-92
Identities = 177/258 (68%), Positives = 211/258 (81%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI GNVGFVFT+ DL E+R+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL I TKIS+GTIEI++DV ++K GD + EATLLNMLNISPFS+GL+I+ V+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
+ P++LD E L +FLEGV +ASVCL GYPTVASVPHSI+NG+K VLA++ T+
Sbjct: 199 YNPEVLDKTEETLHSRFLEGVRNVASVCLQTGYPTVASVPHSIINGYKRVLALSVETDYT 258
Query: 239 FEQAKTVKEFLKDPSKFL 256
F A+ VK FL DPS F+
Sbjct: 259 FPLAENVKAFLADPSAFV 276
Score = 212 (79.7 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 41/72 (56%), Positives = 55/72 (76%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ SR L+DV ++K GDKVG SEATLLNMLNISPFS+GL+I+ V+D+G+I+ P++LD
Sbjct: 146 KISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLD 205
Query: 335 IRPEDLRVKFLE 346
E L +FLE
Sbjct: 206 KTEETLHSRFLE 217
>ZFIN|ZDB-GENE-000629-1 [details] [associations]
symbol:rplp0 "ribosomal protein, large, P0"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0009790 "embryo development"
evidence=IMP] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
ZFIN:ZDB-GENE-000629-1 GO:GO:0042254 GO:GO:0005840 GO:GO:0009790
GO:GO:0003735 GO:GO:0006414 eggNOG:COG0244 HOGENOM:HOG000210987
HOVERGEN:HBG000711 OrthoDB:EOG4VDQ10 EMBL:AF134852 IPI:IPI00497680
UniGene:Dr.55617 ProteinModelPortal:Q9PV90 SMR:Q9PV90 STRING:Q9PV90
PRIDE:Q9PV90 InParanoid:Q9PV90 NextBio:20892355 Uniprot:Q9PV90
Length = 319
Score = 912 (326.1 bits), Expect = 1.7e-91, P = 1.7e-91
Identities = 176/260 (67%), Positives = 213/260 (81%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D++PKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LERL
Sbjct: 19 QLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTMMRKAIRGHLENNPALERL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGFVFT+ DL EVR+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLN---ISPFSYGLIIKMVYDS 175
QAL I TKIS+GTIEI++DV ++K GD + EATLLNMLN ISPFSYGLII+ VYD+
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKPGDKVGASEATLLNMLNMLNISPFSYGLIIQQVYDN 198
Query: 176 GTIFAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAAT 235
G++++P++LDI + L +FL+GV +ASVCL IGYPT+AS+PH+I+NG+K VLAV T
Sbjct: 199 GSVYSPEVLDITEDALHKRFLKGVRNIASVCLQIGYPTLASIPHTIINGYKRVLAVTVET 258
Query: 236 EVDFEQAKTVKEFLKDPSKF 255
+ F A+ VK +L DP+ F
Sbjct: 259 DYTFPLAEKVKAYLADPTAF 278
Score = 209 (78.6 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 42/75 (56%), Positives = 57/75 (76%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLN---ISPFSYGLIIKMVYDSGTIFAPQ 331
+ SR L+DV ++K GDKVG SEATLLNMLN ISPFSYGLII+ VYD+G++++P+
Sbjct: 146 KISRGTIEILSDVQLIKPGDKVGASEATLLNMLNMLNISPFSYGLIIQQVYDNGSVYSPE 205
Query: 332 ILDIRPEDLRVKFLE 346
+LDI + L +FL+
Sbjct: 206 VLDITEDALHKRFLK 220
>UNIPROTKB|F1NB66 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9031
"Gallus gallus" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IEA] InterPro:IPR001790 Pfam:PF00466
GO:GO:0005634 GO:GO:0042254 GO:GO:0022625
GeneTree:ENSGT00390000017839 OMA:AYMHAFN IPI:IPI00588222
EMBL:AADN02043198 EMBL:AADN02043197 Ensembl:ENSGALT00000011731
Uniprot:F1NB66
Length = 253
Score = 888 (317.7 bits), Expect = 5.9e-89, P = 5.9e-89
Identities = 170/234 (72%), Positives = 199/234 (85%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCFVVGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLDDYPKCFVVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGFVFT+ DL E+R+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCDVTVPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL I TKIS+GTIEI++DV ++K GD + EATLLNMLNISPFS+GL+I+ V+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVA 232
+ P++LDI E L +FLEGV +ASVCL IGYPT+ASVPHSIVNG+K VL VA
Sbjct: 199 YNPEVLDITEETLHKRFLEGVRNVASVCLQIGYPTIASVPHSIVNGYKRVLGVA 252
Score = 219 (82.2 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 42/72 (58%), Positives = 56/72 (77%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ SR L+DV ++K GDKVG SEATLLNMLNISPFS+GL+I+ V+D+G+I+ P++LD
Sbjct: 146 KISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLD 205
Query: 335 IRPEDLRVKFLE 346
I E L +FLE
Sbjct: 206 ITEETLHKRFLE 217
>WB|WBGene00004408 [details] [associations]
symbol:rla-0 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006414 "translational elongation" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
GO:GO:0009792 GO:GO:0040007 GO:GO:0006915 GO:GO:0002119
GO:GO:0000003 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 eggNOG:COG0244 EMBL:Z79754 HOGENOM:HOG000210987
KO:K02941 PIR:T21351 RefSeq:NP_492766.1 ProteinModelPortal:Q93572
SMR:Q93572 DIP:DIP-26018N IntAct:Q93572 MINT:MINT-1046682
STRING:Q93572 World-2DPAGE:0011:Q93572 World-2DPAGE:0020:Q93572
PaxDb:Q93572 EnsemblMetazoa:F25H2.10.1 EnsemblMetazoa:F25H2.10.2
GeneID:172943 KEGG:cel:CELE_F25H2.10 UCSC:F25H2.10.1 CTD:172943
WormBase:F25H2.10 GeneTree:ENSGT00390000017839 InParanoid:Q93572
OMA:AYMHAFN NextBio:877621 Uniprot:Q93572
Length = 312
Score = 883 (315.9 bits), Expect = 2.0e-88, P = 2.0e-88
Identities = 162/285 (56%), Positives = 215/285 (75%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
+L +EYPKC +VG DNVGS+Q Q IRQ++ G +LMGKNTM+RKA+RGHL NP LE+L
Sbjct: 19 ELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIRKALRGHLGKNPSLEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI NVGFVFT+ DL E+R KLLEN+ APA+ GAIAPC V +P QNTG+GPEKTSFF
Sbjct: 79 LPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTGMGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL IPTKI++GTIEI+NDVH++KEGD + E+ LLNML ++PFSYGL+++ VYD GT+
Sbjct: 139 QALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTPFSYGLVVRQVYDDGTL 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
+ P++LD+ E+LR +FL GV +ASV L++ YPT+ASV HS+ NG +N+L VAA T+V
Sbjct: 199 YTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHSLANGLQNMLGVAAVTDVS 258
Query: 239 FEQAKTVKEFLKDPSKFLXXXXXXXXXXXXSNRSEERFSRNAETD 283
F++A+T+K F+ DPSKF + + ++ E+D
Sbjct: 259 FKEAETIKAFIADPSKFAAAAPAAAAAPAAAAPAAKKEEPKEESD 303
Score = 228 (85.3 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 39/71 (54%), Positives = 56/71 (78%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ +R LNDVH++KEGDKVG SE+ LLNML ++PFSYGL+++ VYD GT++ P++LD
Sbjct: 146 KIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTPFSYGLVVRQVYDDGTLYTPEVLD 205
Query: 335 IRPEDLRVKFL 345
+ E+LR +FL
Sbjct: 206 MTTEELRKRFL 216
>UNIPROTKB|F8VU65 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0005737
GO:GO:0042254 GO:GO:0005840 EMBL:AC004263 HGNC:HGNC:10371
ChiTaRS:RPLP0 IPI:IPI01022636 ProteinModelPortal:F8VU65 SMR:F8VU65
Ensembl:ENST00000550856 ArrayExpress:F8VU65 Bgee:F8VU65
Uniprot:F8VU65
Length = 247
Score = 871 (311.7 bits), Expect = 3.7e-87, P = 3.7e-87
Identities = 165/228 (72%), Positives = 195/228 (85%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGFVFT+ DL E+R+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL I TKIS+GTIEI++DV ++K GD + EATLLNMLNISPFS+GL+I+ V+D+G+I
Sbjct: 139 QALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSI 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFK 226
+ P++LDI E L +FLEGV +ASVCL IGYPTVASVPHSI+NG+K
Sbjct: 199 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYK 246
Score = 219 (82.2 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 42/72 (58%), Positives = 56/72 (77%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ SR L+DV ++K GDKVG SEATLLNMLNISPFS+GL+I+ V+D+G+I+ P++LD
Sbjct: 146 KISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLD 205
Query: 335 IRPEDLRVKFLE 346
I E L +FLE
Sbjct: 206 ITEETLHSRFLE 217
>UNIPROTKB|E2RLZ4 [details] [associations]
symbol:E2RLZ4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 GeneTree:ENSGT00390000017839 EMBL:AAEX03014742
Ensembl:ENSCAFT00000016673 OMA:GSIYNTE Uniprot:E2RLZ4
Length = 316
Score = 866 (309.9 bits), Expect = 1.3e-86, P = 1.3e-86
Identities = 171/258 (66%), Positives = 207/258 (80%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCF+VGADNVGS+Q Q IR SL VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLDDYPKCFIVGADNVGSKQMQQIRMSLCRNAVVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGFVFT+ DL+E+R+ LL NKV A AR GAIAPC VT+PA NTGLGPEKT FF
Sbjct: 79 LPHIRGNVGFVFTKEDLSEIRDMLLANKVPAAARAGAIAPCEVTVPALNTGLGPEKTFFF 138
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDSS--REATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL I TKI +GTIEI++ V ++K D + +ATLLN+LNISPFS GLII+ V+D+G+I
Sbjct: 139 QALGITTKIFRGTIEILSYVQLIKTRDKAGASQATLLNILNISPFSSGLIIQQVFDNGSI 198
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
+ ++LDI E L +FLEGV +ASVCL IGYPTVASVPHSI+NG+K VLA++ T+
Sbjct: 199 YNTEVLDITEETLHSRFLEGVRNIASVCLQIGYPTVASVPHSIINGYKWVLALSVETDYT 258
Query: 239 FEQAKTVKEFLKDPSKFL 256
F A+ VK FL DPS F+
Sbjct: 259 FPLAEKVKAFLADPSAFV 276
Score = 175 (66.7 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 35/63 (55%), Positives = 48/63 (76%)
Query: 284 LNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVK 343
L+ V ++K DK G S+ATLLN+LNISPFS GLII+ V+D+G+I+ ++LDI E L +
Sbjct: 155 LSYVQLIKTRDKAGASQATLLNILNISPFSSGLIIQQVFDNGSIYNTEVLDITEETLHSR 214
Query: 344 FLE 346
FLE
Sbjct: 215 FLE 217
>UNIPROTKB|F1M2B8 [details] [associations]
symbol:F1M2B8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006414 "translational elongation" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR001790
InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466 GO:GO:0042254
GO:GO:0005840 GO:GO:0003735 GO:GO:0006414 IPI:IPI00951976
Ensembl:ENSRNOT00000041352 Uniprot:F1M2B8
Length = 297
Score = 818 (293.0 bits), Expect = 1.5e-81, P = 1.5e-81
Identities = 163/257 (63%), Positives = 202/257 (78%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPK F+VGADNVGS+Q Q IR SL VVLMGKNTMMRKAIRGHLE+N L++L
Sbjct: 19 QLLDDYPKGFIVGADNVGSKQMQQIRMSLREKAVVLMGKNTMMRKAIRGHLENNRALKKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGF+FT+ DL E+R+ +L NKV AR GAI PC VT+PAQNTGLGPEK
Sbjct: 79 LPHIRGNVGFMFTKEDL-EIRDMMLANKVPVAARAGAITPCEVTVPAQNTGLGPEK---- 133
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTI 178
AL I TKIS+GTIEI++DV ++K GD + EATLL+MLNISPFS+GLII+ V+D+G+I
Sbjct: 134 -ALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLSMLNISPFSFGLIIQQVFDNGSI 192
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
++P++LD + L +FLEGV +A VCL IGYPTVASVPHSI+NG+K VLA++ T+
Sbjct: 193 YSPEVLDTE-QALHSRFLEGVCNVAGVCLQIGYPTVASVPHSIINGYKRVLALSVETDYT 251
Query: 239 FEQAKTVKEFLKDPSKF 255
F A+ VK FL DPS F
Sbjct: 252 FSVAEKVKAFLADPSAF 268
Score = 202 (76.2 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 40/72 (55%), Positives = 56/72 (77%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ SR L+DV ++K GDKVG SEATLL+MLNISPFS+GLII+ V+D+G+I++P++LD
Sbjct: 140 KISRGTIEILSDVQLIKTGDKVGASEATLLSMLNISPFSFGLIIQQVFDNGSIYSPEVLD 199
Query: 335 IRPEDLRVKFLE 346
+ L +FLE
Sbjct: 200 TE-QALHSRFLE 210
>UNIPROTKB|F8VW21 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0005737
GO:GO:0042254 GO:GO:0005840 EMBL:AC004263 HGNC:HGNC:10371
ChiTaRS:RPLP0 IPI:IPI01021320 ProteinModelPortal:F8VW21 SMR:F8VW21
Ensembl:ENST00000547211 ArrayExpress:F8VW21 Bgee:F8VW21
Uniprot:F8VW21
Length = 244
Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
Identities = 155/225 (68%), Positives = 185/225 (82%)
Query: 21 QFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERLLPHIKGNVGFVFTRGDLNEV 80
Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+LLPHI+GNVGFVFT+ DL E+
Sbjct: 19 QMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEI 78
Query: 81 REKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDV 140
R+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFFQAL I TKIS+GTIEI++DV
Sbjct: 79 RDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDV 138
Query: 141 HILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKFLEG 198
++K GD + EATLLNMLNISPFS+GL+I+ V+D+G+I+ P++LDI E L +FLEG
Sbjct: 139 QLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEG 198
Query: 199 VATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVDFEQAK 243
V +ASVCL IGYPTVASVPHSI+NG+K VLA++ T+ F A+
Sbjct: 199 VRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAE 243
Score = 219 (82.2 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 42/72 (58%), Positives = 56/72 (77%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ SR L+DV ++K GDKVG SEATLLNMLNISPFS+GL+I+ V+D+G+I+ P++LD
Sbjct: 126 KISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLD 185
Query: 335 IRPEDLRVKFLE 346
I E L +FLE
Sbjct: 186 ITEETLHSRFLE 197
>RGD|1564469 [details] [associations]
symbol:RGD1564469 "similar to Acidic ribosomal phosphoprotein
P0" species:10116 "Rattus norvegicus" [GO:0005840 "ribosome"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR001790 Pfam:PF00466 RGD:1564469 GO:GO:0042254
GO:GO:0005840 OrthoDB:EOG4VDQ10 GeneTree:ENSGT00390000017839
IPI:IPI00368902 Ensembl:ENSRNOT00000040909 Uniprot:D3ZJT4
Length = 298
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 155/258 (60%), Positives = 191/258 (74%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGK---NTMMRKAIRGHLEHNPGL 57
QL+D+YPKCF++GADNV S+Q Q IR SL+G VVLM K N MMRKAIR HLE N L
Sbjct: 19 QLLDDYPKCFIMGADNVSSKQMQQIRMSLQGKAVVLMKKKRKNAMMRKAIREHLEKNRAL 78
Query: 58 ERLLPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKT 117
E+L PH +GNVGF+FT+ DL E+R+ LL NKV A + GA+APC VT AQNTGLGPEKT
Sbjct: 79 EKLPPHTRGNVGFMFTKEDLTEIRDMLLTNKVPAATQAGALAPCEVTAHAQNTGLGPEKT 138
Query: 118 SFFQALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDS 175
SFFQ L I TKIS+G IEI++DV ++K G+ + EATLLN ISP GLII+ V+D+
Sbjct: 139 SFFQVLGINTKISRGIIEILSDVQLIKTGNKVGAGEATLLN---ISPSVSGLIIRQVFDN 195
Query: 176 GTIFAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAAT 235
G+I+ P++LDI + LR FLEGV +A+VCL IG PTV SVPHSI+NG K VLA++ T
Sbjct: 196 GSIYNPEVLDITEQILRSHFLEGVRNVAAVCLQIGEPTVTSVPHSIINGSKRVLALSVET 255
Query: 236 EVDFEQAKTVKEFLKDPS 253
+ F A+ VK FL DPS
Sbjct: 256 DYTFPLAEKVKAFLADPS 273
Score = 161 (61.7 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 36/72 (50%), Positives = 49/72 (68%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ SR L+DV ++K G+KVG EATLLN ISP GLII+ V+D+G+I+ P++LD
Sbjct: 149 KISRGIIEILSDVQLIKTGNKVGAGEATLLN---ISPSVSGLIIRQVFDNGSIYNPEVLD 205
Query: 335 IRPEDLRVKFLE 346
I + LR FLE
Sbjct: 206 ITEQILRSHFLE 217
>UNIPROTKB|Q3B7A4 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
GO:GO:0005737 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 EMBL:AC004263 HOGENOM:HOG000210987 HOVERGEN:HBG000711
UniGene:Hs.546285 HGNC:HGNC:10371 ChiTaRS:RPLP0 EMBL:BC107717
IPI:IPI00556485 SMR:Q3B7A4 STRING:Q3B7A4 Ensembl:ENST00000313104
UCSC:uc001txr.3 Uniprot:Q3B7A4
Length = 255
Score = 563 (203.2 bits), Expect = 8.6e-73, Sum P(2) = 8.6e-73
Identities = 107/137 (78%), Positives = 120/137 (87%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGFVFT+ DL E+R+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEII 137
QAL I TKIS+GTIEI+
Sbjct: 139 QALGITTKISRGTIEIL 155
Score = 191 (72.3 bits), Expect = 8.6e-73, Sum P(2) = 8.6e-73
Identities = 37/59 (62%), Positives = 45/59 (76%)
Query: 198 GVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVDFEQAKTVKEFLKDPSKFL 256
GV +ASVCL IGYPTVASVPHSI+NG+K VLA++ T+ F A+ VK FL DPS F+
Sbjct: 156 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFV 214
>TAIR|locus:2074623 [details] [associations]
symbol:AT3G11250 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=ISS] [GO:0006414 "translational elongation"
evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0005794 "Golgi apparatus" evidence=RCA]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
EnsemblPlants:AT3G11250.1 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 GO:GO:0009651 GO:GO:0042254 GO:GO:0003735
GO:GO:0022626 EMBL:AC073395 GO:GO:0006414 HOGENOM:HOG000210987
KO:K02941 ProtClustDB:CLSN2683388 EMBL:AY056150 EMBL:AY091201
EMBL:AY087728 IPI:IPI00523299 RefSeq:NP_187734.1 UniGene:At.17400
ProteinModelPortal:P57691 SMR:P57691 STRING:P57691 PRIDE:P57691
ProMEX:P57691 GeneID:820296 KEGG:ath:AT3G11250 TAIR:At3g11250
InParanoid:P57691 OMA:GGVREKK PhylomeDB:P57691
Genevestigator:P57691 GermOnline:AT3G11250 Uniprot:P57691
Length = 323
Score = 732 (262.7 bits), Expect = 2.0e-72, P = 2.0e-72
Identities = 140/260 (53%), Positives = 190/260 (73%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEH--NPGLE 58
QL+DEY + VV ADNVGS Q QNIR+ L G VVLMGKNTMM++++R H E+ N +
Sbjct: 19 QLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENSGNTAIL 78
Query: 59 RLLPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTS 118
LLP ++GNVG +FT+GDL EV E++ + KV APAR G +AP V + NTGL P +TS
Sbjct: 79 NLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTS 138
Query: 119 FFQALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSG 176
FFQ L+IPTKI+KGT+EII V ++K+GD S EA LL L I PFSYGL+++ VYD+G
Sbjct: 139 FFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYDNG 198
Query: 177 TIFAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATE 236
++F+P++LD+ + L KF G++ + S+ L++ YPT+A+ PH +N +KN LA+A AT+
Sbjct: 199 SVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATD 258
Query: 237 VDFEQAKTVKEFLKDPSKFL 256
F QA+ VKEFLKDPSKF+
Sbjct: 259 YTFPQAEKVKEFLKDPSKFV 278
Score = 176 (67.0 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 31/61 (50%), Positives = 46/61 (75%)
Query: 284 LNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVK 343
+ V ++K+GDKVG SEA LL L I PFSYGL+++ VYD+G++F+P++LD+ + L K
Sbjct: 157 ITPVELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEK 216
Query: 344 F 344
F
Sbjct: 217 F 217
>TAIR|locus:2083564 [details] [associations]
symbol:AT3G09200 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0006414
"translational elongation" evidence=IEA;ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0009409 "response to cold" evidence=IEP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0005829 "cytosol" evidence=IDA] [GO:0010043
"response to zinc ion" evidence=IEP] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0005507 "copper ion binding"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0048046
"apoplast" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0009664 "plant-type cell wall organization" evidence=RCA]
[GO:0042545 "cell wall modification" evidence=RCA]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
EnsemblPlants:AT3G09200.1 GO:GO:0005886 GO:GO:0009506 GO:GO:0009507
GO:GO:0046686 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0010043 GO:GO:0048046 GO:GO:0009651 GO:GO:0009409
GO:GO:0005507 GO:GO:0042254 GO:GO:0003735 GO:GO:0022626
EMBL:AC011436 GO:GO:0006414 EMBL:AC009326 eggNOG:COG0244
HOGENOM:HOG000210987 KO:K02941 ProtClustDB:CLSN2683388
EMBL:AF370225 EMBL:AY059117 EMBL:AY086582 EMBL:Z26534
IPI:IPI00517961 RefSeq:NP_187531.1 UniGene:At.21866
ProteinModelPortal:Q42112 SMR:Q42112 STRING:Q42112 PaxDb:Q42112
PRIDE:Q42112 ProMEX:Q42112 GeneID:820076 KEGG:ath:AT3G09200
TAIR:At3g09200 InParanoid:Q42112 OMA:AVATEYT PhylomeDB:Q42112
Genevestigator:Q42112 GermOnline:AT3G09200 Uniprot:Q42112
Length = 320
Score = 731 (262.4 bits), Expect = 2.5e-72, P = 2.5e-72
Identities = 140/259 (54%), Positives = 189/259 (72%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEH--NPGLE 58
QL+DEY + VV ADNVGS Q QNIR+ L G VVLMGKNTMM++++R H E+ N +
Sbjct: 19 QLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENTGNTAIL 78
Query: 59 RLLPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTS 118
LLP ++GNVG +FT+GDL EV E++ + KV APAR G +AP V + NTGL P +TS
Sbjct: 79 NLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTS 138
Query: 119 FFQALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSG 176
FFQ L+IPTKI+KGT+EII V ++K+GD S EA LL L I PFSYGL+++ VYD+G
Sbjct: 139 FFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYDNG 198
Query: 177 TIFAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATE 236
++F+P++LD+ + L KF G++ + S+ L++ YPT+A+ PH +N +KN LA+A ATE
Sbjct: 199 SVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATE 258
Query: 237 VDFEQAKTVKEFLKDPSKF 255
F QA+ VKE+LKDPSKF
Sbjct: 259 YTFPQAEKVKEYLKDPSKF 277
Score = 176 (67.0 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 31/61 (50%), Positives = 46/61 (75%)
Query: 284 LNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVK 343
+ V ++K+GDKVG SEA LL L I PFSYGL+++ VYD+G++F+P++LD+ + L K
Sbjct: 157 ITPVELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEK 216
Query: 344 F 344
F
Sbjct: 217 F 217
>TAIR|locus:2061231 [details] [associations]
symbol:AT2G40010 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=ISS] [GO:0006414 "translational elongation"
evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005794 "Golgi apparatus" evidence=RCA]
[GO:0001510 "RNA methylation" evidence=RCA] InterPro:IPR001790
InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
EnsemblPlants:AT2G40010.1 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0042254 GO:GO:0003735 GO:GO:0022626 EMBL:AF002109
GO:GO:0006414 eggNOG:COG0244 EMBL:BT001919 IPI:IPI00525504
PIR:B84824 RefSeq:NP_181530.1 UniGene:At.28353 UniGene:At.49578
ProteinModelPortal:O04204 SMR:O04204 IntAct:O04204 STRING:O04204
GeneID:818589 KEGG:ath:AT2G40010 TAIR:At2g40010
HOGENOM:HOG000210987 InParanoid:O04204 KO:K02941 OMA:APIFEKD
PhylomeDB:O04204 ProtClustDB:CLSN2683388 Genevestigator:O04204
GermOnline:AT2G40010 Uniprot:O04204
Length = 317
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 142/259 (54%), Positives = 188/259 (72%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEH--NPGLE 58
QL++EY + VV ADNVGS Q QNIR+ L G VVLMGKNTMM++++R H + N
Sbjct: 20 QLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHADKTGNQAFL 79
Query: 59 RLLPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTS 118
LLP ++GNVG +FT+GDL EV E++ + KV APAR G +AP V + NTGL P +TS
Sbjct: 80 SLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTS 139
Query: 119 FFQALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSG 176
FFQ L+IPTKI+KGT+EII V ++K+GD S EA LL L I PFSYGL+++ VYD+G
Sbjct: 140 FFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVESVYDNG 199
Query: 177 TIFAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATE 236
++F P++L++ +DL KF GV+ + ++ L+I YPTVA+ PH +N +KNVLAVA ATE
Sbjct: 200 SVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAAPHMFLNAYKNVLAVALATE 259
Query: 237 VDFEQAKTVKEFLKDPSKF 255
F QA+ VKEFLKDP+KF
Sbjct: 260 YSFPQAENVKEFLKDPTKF 278
Score = 173 (66.0 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 31/61 (50%), Positives = 46/61 (75%)
Query: 284 LNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVK 343
+ V ++K+GDKVG SEA LL L I PFSYGL+++ VYD+G++F P++L++ +DL K
Sbjct: 158 ITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEK 217
Query: 344 F 344
F
Sbjct: 218 F 218
>ASPGD|ASPL0000036346 [details] [associations]
symbol:AN2734 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0070180
"LSU rRNA binding" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IEA] InterPro:IPR001790
InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466 EMBL:BN001306
GO:GO:0042254 GO:GO:0005840 GO:GO:0003735 GO:GO:0006414
eggNOG:COG0244 HOGENOM:HOG000210987 KO:K02941 OMA:AYMHAFN
EMBL:AACD01000048 RefSeq:XP_660338.1 STRING:Q5B9P6
EnsemblFungi:CADANIAT00010379 GeneID:2874227 KEGG:ani:AN2734.2
Uniprot:Q5B9P6
Length = 312
Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
Identities = 137/256 (53%), Positives = 183/256 (71%)
Query: 2 LVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERLL 61
L+DEY F+VG DNV S+Q IR +L G GVVLMGKNTM+R+A++G + NP ERLL
Sbjct: 18 LLDEYKTVFIVGVDNVSSQQMHEIRIALRGEGVVLMGKNTMVRRALKGFINDNPEYERLL 77
Query: 62 PHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFFQ 121
PH+KGNVGF+FT GDL E ++K+L N+V APAR GA+AP V IPA NTG+ P KTSFFQ
Sbjct: 78 PHVKGNVGFIFTNGDLKETKDKILSNRVAAPARAGAVAPADVWIPAGNTGMEPGKTSFFQ 137
Query: 122 ALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTIF 179
AL +PTKI++GTIEI D+ +++EG+ EATLLNMLNISPF+YG+ I+ VY G F
Sbjct: 138 ALGVPTKIARGTIEITTDLKLVEEGNKVGPSEATLLNMLNISPFTYGMTIQQVYQDGQTF 197
Query: 180 APQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVDF 239
+ +LDI E L F + T+ S+ L++ YPT+ SV HS+VN +K VLAVA TE +
Sbjct: 198 SAAVLDIEEEQLLKVFSSAINTITSISLAVNYPTLPSVIHSVVNSYKKVLAVAVETEYSW 257
Query: 240 EQAKTVKEFLKDPSKF 255
+ + +K+ + +P +
Sbjct: 258 PEIEELKDRIANPEAY 273
Score = 177 (67.4 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 33/55 (60%), Positives = 43/55 (78%)
Query: 286 DVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDL 340
D+ +++EG+KVGPSEATLLNMLNISPF+YG+ I+ VY G F+ +LDI E L
Sbjct: 155 DLKLVEEGNKVGPSEATLLNMLNISPFTYGMTIQQVYQDGQTFSAAVLDIEEEQL 209
>UNIPROTKB|F8VZS0 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 EMBL:AC004263 HGNC:HGNC:10371 ChiTaRS:RPLP0
IPI:IPI01022462 ProteinModelPortal:F8VZS0 SMR:F8VZS0
Ensembl:ENST00000546990 ArrayExpress:F8VZS0 Bgee:F8VZS0
Uniprot:F8VZS0
Length = 246
Score = 373 (136.4 bits), Expect = 8.6e-71, Sum P(2) = 8.6e-71
Identities = 72/121 (59%), Positives = 94/121 (77%)
Query: 138 NDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKF 195
+DV ++K GD + EATLLNMLNISPFS+GL+I+ V+D+G+I+ P++LDI E L +F
Sbjct: 107 SDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRF 166
Query: 196 LEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVDFEQAKTVKEFLKDPSKF 255
LEGV +ASVCL IGYPTVASVPHSI+NG+K VLA++ T+ F A+ VK FL DPS F
Sbjct: 167 LEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 226
Query: 256 L 256
+
Sbjct: 227 V 227
Score = 362 (132.5 bits), Expect = 8.6e-71, Sum P(2) = 8.6e-71
Identities = 67/88 (76%), Positives = 77/88 (87%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENK 88
LPHI+GNVGFVFT+ DL E+R+ LL NK
Sbjct: 79 LPHIRGNVGFVFTKEDLTEIRDMLLANK 106
Score = 211 (79.3 bits), Expect = 9.9e-54, Sum P(2) = 9.9e-54
Identities = 39/62 (62%), Positives = 52/62 (83%)
Query: 285 NDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKF 344
+DV ++K GDKVG SEATLLNMLNISPFS+GL+I+ V+D+G+I+ P++LDI E L +F
Sbjct: 107 SDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRF 166
Query: 345 LE 346
LE
Sbjct: 167 LE 168
>CGD|CAL0001932 [details] [associations]
symbol:RPP0 species:5476 "Candida albicans" [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0030686
"90S preribosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0070180 "LSU rRNA binding" evidence=IEA] [GO:0000027 "ribosomal
large subunit assembly" evidence=IEA] InterPro:IPR001790
InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466 CGD:CAL0001932
GO:GO:0042254 GO:GO:0005840 GO:GO:0003735 EMBL:AACQ01000024
GO:GO:0006414 eggNOG:COG0244 KO:K02941 RefSeq:XP_720309.1
RefSeq:XP_888730.1 STRING:Q5AFQ4 GeneID:3638023 GeneID:3704214
KEGG:cal:CaO19.7015 KEGG:cal:CaO19_7015 Uniprot:Q5AFQ4
Length = 312
Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
Identities = 142/287 (49%), Positives = 195/287 (67%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
+L++EY FVVG DNV S+Q IR++L G VVLMGKNTM+R+AIRG L P E+L
Sbjct: 17 ELLEEYKSIFVVGVDNVSSQQMHEIRKALRGDAVVLMGKNTMVRRAIRGFLSELPEFEKL 76
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LP IKGNVGF+FT GDL +R+ ++ N V APAR GA+AP V IPA NTG+ P KTSFF
Sbjct: 77 LPFIKGNVGFIFTNGDLKSIRDIVVSNVVAAPARAGAVAPKDVWIPAGNTGMEPGKTSFF 136
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL +PTKI++GTIEI++DV ++++ EATLLNMLNISPF+YG+ + VYD+G +
Sbjct: 137 QALGVPTKIARGTIEIVSDVKVVEQDAKVGPSEATLLNMLNISPFTYGMSVVQVYDNGQV 196
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
F ILDI ++L F+ + T+AS+ L+ GYPT+ SV HSI+N +KNVLA++ AT+
Sbjct: 197 FPSSILDITDDELISHFVSAINTIASISLAAGYPTLPSVGHSIINNYKNVLALSVATDYT 256
Query: 239 FEQAKTVKEFLKDPSKFLXXXXXXXXXXXXSNRS--EERFSRNAETD 283
+E ++ VK+ L +P + + + EE + E+D
Sbjct: 257 YEGSEAVKDRLANPEAYAAAAPAAAAAGGAAEEAATEEAAADEEESD 303
Score = 176 (67.0 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 34/71 (47%), Positives = 50/71 (70%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ +R ++DV ++++ KVGPSEATLLNMLNISPF+YG+ + VYD+G +F ILD
Sbjct: 144 KIARGTIEIVSDVKVVEQDAKVGPSEATLLNMLNISPFTYGMSVVQVYDNGQVFPSSILD 203
Query: 335 IRPEDLRVKFL 345
I ++L F+
Sbjct: 204 ITDDELISHFV 214
>POMBASE|SPCC18.14c [details] [associations]
symbol:rpp0 "60S acidic ribosomal protein Rpp0
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002182
"cytoplasmic translational elongation" evidence=NAS] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0022626 "cytosolic ribosome"
evidence=NAS] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
PomBase:SPCC18.14c EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0042254 GO:GO:0003735 GO:GO:0022626 GO:GO:0002182
eggNOG:COG0244 HOGENOM:HOG000210987 KO:K02941 OMA:AYMHAFN
PIR:T41157 RefSeq:NP_588393.1 ProteinModelPortal:O74864 SMR:O74864
IntAct:O74864 STRING:O74864 PRIDE:O74864 EnsemblFungi:SPCC18.14c.1
GeneID:2538893 KEGG:spo:SPCC18.14c OrthoDB:EOG4Z39PT
NextBio:20800072 Uniprot:O74864
Length = 312
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 135/257 (52%), Positives = 179/257 (69%)
Query: 2 LVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERLL 61
L ++Y FVV DNV S+Q +R+ L G ++MGKNTM+R+A+RG + P LERLL
Sbjct: 18 LFEKYNSLFVVNIDNVSSQQMHTVRKQLRGTAELIMGKNTMIRRAMRGIINDMPELERLL 77
Query: 62 PHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFFQ 121
P ++GNVGFVFT DL EVRE ++ N + APAR AIAP V +PA NTG+ P KTSFFQ
Sbjct: 78 PVVRGNVGFVFTNADLKEVRETIIANVIAAPARPNAIAPLDVFVPAGNTGMEPGKTSFFQ 137
Query: 122 ALSIPTKISKGTIEIINDVHIL-KEGD-SSREATLLNMLNISPFSYGLIIKMVYDSGTIF 179
AL IPTKI++GTIEI +DVH++ K+ EATLLNMLNISPF+YG+ + +YD G +F
Sbjct: 138 ALGIPTKITRGTIEITSDVHLVSKDAKVGPSEATLLNMLNISPFTYGMDVLTIYDQGNVF 197
Query: 180 APQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVDF 239
+P+ILD+ EDL L + + ++ L YPT+ SV HS+VN +KN++AV+ ATE F
Sbjct: 198 SPEILDVSEEDLIGHLLSAASIITAISLGANYPTILSVMHSVVNAYKNLVAVSLATEYTF 257
Query: 240 EQAKTVKEFLKDPSKFL 256
E + K FL DPS F+
Sbjct: 258 EGTEQTKAFLADPSAFV 274
Score = 194 (73.4 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 34/56 (60%), Positives = 46/56 (82%)
Query: 285 NDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDL 340
+DVH++ + KVGPSEATLLNMLNISPF+YG+ + +YD G +F+P+ILD+ EDL
Sbjct: 154 SDVHLVSKDAKVGPSEATLLNMLNISPFTYGMDVLTIYDQGNVFSPEILDVSEEDL 209
>SGD|S000004332 [details] [associations]
symbol:RPP0 "Conserved ribosomal protein P0 of the ribosomal
stalk" species:4932 "Saccharomyces cerevisiae" [GO:0003735
"structural constituent of ribosome" evidence=IEA;TAS] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=TAS] [GO:0002181 "cytoplasmic
translation" evidence=TAS] [GO:0006414 "translational elongation"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IDA]
[GO:0070180 "LSU rRNA binding" evidence=IDA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0000027 "ribosomal large subunit
assembly" evidence=IMP] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 SGD:S000004332 EMBL:BK006945
GO:GO:0003735 GO:GO:0002181 PDB:4B6A PDBsum:4B6A GO:GO:0030686
GO:GO:0000027 EMBL:U19028 PDB:3J16 PDBsum:3J16 GO:GO:0006414
GO:GO:0022625 eggNOG:COG0244 GO:GO:0070180 PDB:3IZS PDB:3O5H
PDB:3U5I PDBsum:3IZS PDBsum:3O5H PDBsum:3U5I HOGENOM:HOG000210987
KO:K02941 GeneTree:ENSGT00390000017839 OrthoDB:EOG4Z39PT
EMBL:X06959 EMBL:D00529 EMBL:X13328 EMBL:M26506 EMBL:M37326
PIR:S51343 RefSeq:NP_013444.1 ProteinModelPortal:P05317 SMR:P05317
DIP:DIP-1582N IntAct:P05317 MINT:MINT-384116 STRING:P05317
SWISS-2DPAGE:P05317 PaxDb:P05317 PeptideAtlas:P05317
EnsemblFungi:YLR340W GeneID:851052 KEGG:sce:YLR340W OMA:PILSTFG
NextBio:967667 Genevestigator:P05317 GermOnline:YLR340W
Uniprot:P05317
Length = 312
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 130/288 (45%), Positives = 189/288 (65%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
+ ++EY FVVG DNV S+Q +R+ L G VVLMGKNTM+R+AIRG L P E+L
Sbjct: 17 EYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRGFLSDLPDFEKL 76
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LP +KGNVGFVFT L E++ ++ N+V APAR GA+AP + + A NTG+ P KTSFF
Sbjct: 77 LPFVKGNVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWVRAVNTGMEPGKTSFF 136
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTI 178
QAL +PTKI++GTIEI++DV ++ G+ EA+LLN+LNISPF++GL + VYD+G +
Sbjct: 137 QALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTFGLTVVQVYDNGQV 196
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
F ILDI E+L F+ V+T+AS+ L+IGYPT+ SV H+++N +K++LAVA A
Sbjct: 197 FPSSILDITDEELVSHFVSAVSTIASISLAIGYPTLPSVGHTLINNYKDLLAVAIAASYH 256
Query: 239 FEQAKTVKEFLKDPSKFLXXXXXXXXXXXXSNRSEERFSRNAETDLND 286
+ + + + + +++P K+ E + E + +D
Sbjct: 257 YPEIEDLVDRIENPEKYAAAAPAATSAASGDAAPAEEAAAEEEEESDD 304
Score = 168 (64.2 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 33/71 (46%), Positives = 49/71 (69%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ +R ++DV ++ G+KVG SEA+LLN+LNISPF++GL + VYD+G +F ILD
Sbjct: 144 KIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTFGLTVVQVYDNGQVFPSSILD 203
Query: 335 IRPEDLRVKFL 345
I E+L F+
Sbjct: 204 ITDEELVSHFV 214
>UNIPROTKB|J9P5Q4 [details] [associations]
symbol:J9P5Q4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006414 "translational elongation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001813 Pfam:PF00428 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 GeneTree:ENSGT00390000017839 EMBL:AAEX03007598
Ensembl:ENSCAFT00000048593 OMA:EESVESC Uniprot:J9P5Q4
Length = 267
Score = 585 (211.0 bits), Expect = 2.6e-63, Sum P(2) = 2.6e-63
Identities = 116/192 (60%), Positives = 147/192 (76%)
Query: 67 NVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFFQALSIP 126
NVGFVFT+ DL E+R+ LL +KV A AR GAIAPC T+PAQNTGLG ++TSFFQAL I
Sbjct: 35 NVGFVFTKEDLTEMRDMLLADKVPAAARAGAIAPCEDTVPAQNTGLGAKRTSFFQALGIT 94
Query: 127 TKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTIFAPQIL 184
TKIS+GT EI+NDV ++K D + EATLLNMLNI PFS+GLI++ V+D+G+I P++L
Sbjct: 95 TKISRGTTEILNDVQLIKARDKVGASEATLLNMLNIPPFSFGLIVQQVFDNGSICTPEVL 154
Query: 185 DIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVDFEQAKT 244
DI E L+ FLEGV ++ASVCL +GYPTVASVPH I+NG+K A++ T+ F A+
Sbjct: 155 DITEETLQSCFLEGVRSVASVCLQVGYPTVASVPHPIINGYKRGPALSVETDYTFPLAEK 214
Query: 245 VKEFLKDPSKFL 256
VK FL DPS F+
Sbjct: 215 VKAFLADPSAFV 226
Score = 206 (77.6 bits), Expect = 4.2e-23, Sum P(2) = 4.2e-23
Identities = 41/72 (56%), Positives = 53/72 (73%)
Query: 275 RFSRNAETDLNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILD 334
+ SR LNDV ++K DKVG SEATLLNMLNI PFS+GLI++ V+D+G+I P++LD
Sbjct: 96 KISRGTTEILNDVQLIKARDKVGASEATLLNMLNIPPFSFGLIVQQVFDNGSICTPEVLD 155
Query: 335 IRPEDLRVKFLE 346
I E L+ FLE
Sbjct: 156 ITEETLQSCFLE 167
Score = 79 (32.9 bits), Expect = 2.6e-63, Sum P(2) = 2.6e-63
Identities = 15/19 (78%), Positives = 17/19 (89%)
Query: 1 QLVDEYPKCFVVGADN-VG 18
QLVD+YPKCF+ GADN VG
Sbjct: 19 QLVDDYPKCFLAGADNNVG 37
>UNIPROTKB|F1LWD6 [details] [associations]
symbol:F1LWD6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006414 "translational elongation" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR001790
InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466 GO:GO:0042254
GO:GO:0005840 GO:GO:0003735 GO:GO:0006414
GeneTree:ENSGT00390000017839 IPI:IPI00561389
Ensembl:ENSRNOT00000047989 Uniprot:F1LWD6
Length = 301
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 132/255 (51%), Positives = 171/255 (67%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
+L+D+YPK F+VGADNVGS+Q ++ + G+ MGK+TMM KAIRG+LE+NP LE+L
Sbjct: 19 KLLDDYPKFFIVGADNVGSKQM-HLSKGRRGV----MGKSTMMHKAIRGYLENNPALEKL 73
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPH +GNV F FT DL E+R LL +KV A A GAIA C VT AQNTGL PEKTSFF
Sbjct: 74 LPHFRGNVSFAFTTEDLTEIRAMLLTSKVPAAALAGAIASCEVTAHAQNTGLAPEKTSFF 133
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDSSREATLLNMLNISPFSYGLIIKMVYDSGTIFA 180
QA I TKIS+ TIEI++DV ++K GD + +SP G V+D+G+I+
Sbjct: 134 QASGITTKISRVTIEILSDVQLIKPGDKVGASEHAEH-PLSPLG-G-----VFDNGSIYN 186
Query: 181 PQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVDFE 240
P +LDI + L FLEGV + VCL +GY TVA+ PHSI++G+K VL +A T+ F
Sbjct: 187 PDMLDITNQILHSHFLEGVCNMTRVCLQVGYSTVATGPHSIISGYKQVL-LAVETDYTFP 245
Query: 241 QAKTVKEFLKDPSKF 255
A+ V+ L DPS F
Sbjct: 246 LAEKVEASLADPSAF 260
>UNIPROTKB|F8VPE8 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0005737
GO:GO:0042254 GO:GO:0005840 EMBL:AC004263 HGNC:HGNC:10371
ChiTaRS:RPLP0 IPI:IPI01022043 ProteinModelPortal:F8VPE8 SMR:F8VPE8
Ensembl:ENST00000547191 ArrayExpress:F8VPE8 Bgee:F8VPE8
Uniprot:F8VPE8
Length = 153
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 112/147 (76%), Positives = 128/147 (87%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 5 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKL 64
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGFVFT+ DL E+R+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 65 LPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFF 124
Query: 121 QALSIPTKISKGTIEIINDVHILKEGD 147
QAL I TKIS+GTIEI++DV ++K GD
Sbjct: 125 QALGITTKISRGTIEILSDVQLIKTGD 151
>GENEDB_PFALCIPARUM|PF11_0313 [details] [associations]
symbol:PF11_0313 "ribosomal phosphoprotein P0"
species:5833 "Plasmodium falciparum" [GO:0022625 "cytosolic large
ribosomal subunit" evidence=ISS] InterPro:IPR001790
InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466 GO:GO:0042254
GO:GO:0003735 EMBL:AE014186 GO:GO:0006414 GO:GO:0022625
HOGENOM:HOG000210987 KO:K02941 OMA:AYMHAFN ProtClustDB:PTZ00135
RefSeq:XP_001347984.1 ProteinModelPortal:Q8II61 IntAct:Q8II61
MINT:MINT-1569176 PRIDE:Q8II61 EnsemblProtists:PF11_0313:mRNA
GeneID:810860 KEGG:pfa:PF11_0313 EuPathDB:PlasmoDB:PF3D7_1130200
Uniprot:Q8II61
Length = 316
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 116/275 (42%), Positives = 171/275 (62%)
Query: 2 LVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERLL 61
L+ +Y K +V DNVGS Q ++R+SL G +LMGKNT +R A++ +L+ P +E+LL
Sbjct: 20 LIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTRIRTALKKNLQAVPQIEKLL 79
Query: 62 PHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFFQ 121
P +K N+GFVF + DL+E+R +L+NK APAR G IAP V IP TG+ P TSFFQ
Sbjct: 80 PLVKLNMGFVFCKDDLSEIRNIILDNKSPAPARLGVIAPIDVFIPPGPTGMDPSHTSFFQ 139
Query: 122 ALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSGTIF 179
+L I TKI KG IEI VH++K+G+ ++ ATLL N+ PFSYG+ ++ VYD G I+
Sbjct: 140 SLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLQKFNMKPFSYGVDVRTVYDDGVIY 199
Query: 180 APQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVDF 239
++LDI ED+ KF +GV+ +A++ + G T AS PH V FKN++A+ ++ F
Sbjct: 200 DAKVLDITDEDILEKFSKGVSNVAALSRATGVITEASYPHVFVEAFKNIVALIIDSDYTF 259
Query: 240 EQAKTVKEFLKDPSKFLXXXXXXXXXXXXSNRSEE 274
+ +K+ +++P F + EE
Sbjct: 260 PLMENIKKMVENPEAFAAVAAPASAAKADEPKKEE 294
Score = 159 (61.0 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 29/58 (50%), Positives = 41/58 (70%)
Query: 287 VHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKF 344
VH++K+G+KV S ATLL N+ PFSYG+ ++ VYD G I+ ++LDI ED+ KF
Sbjct: 158 VHLIKQGEKVTASSATLLQKFNMKPFSYGVDVRTVYDDGVIYDAKVLDITDEDILEKF 215
>UNIPROTKB|Q8II61 [details] [associations]
symbol:PF11_0313 "60S ribosomal protein P0" species:36329
"Plasmodium falciparum 3D7" [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 GO:GO:0042254 GO:GO:0003735 EMBL:AE014186
GO:GO:0006414 GO:GO:0022625 HOGENOM:HOG000210987 KO:K02941
OMA:AYMHAFN ProtClustDB:PTZ00135 RefSeq:XP_001347984.1
ProteinModelPortal:Q8II61 IntAct:Q8II61 MINT:MINT-1569176
PRIDE:Q8II61 EnsemblProtists:PF11_0313:mRNA GeneID:810860
KEGG:pfa:PF11_0313 EuPathDB:PlasmoDB:PF3D7_1130200 Uniprot:Q8II61
Length = 316
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 116/275 (42%), Positives = 171/275 (62%)
Query: 2 LVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERLL 61
L+ +Y K +V DNVGS Q ++R+SL G +LMGKNT +R A++ +L+ P +E+LL
Sbjct: 20 LIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTRIRTALKKNLQAVPQIEKLL 79
Query: 62 PHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFFQ 121
P +K N+GFVF + DL+E+R +L+NK APAR G IAP V IP TG+ P TSFFQ
Sbjct: 80 PLVKLNMGFVFCKDDLSEIRNIILDNKSPAPARLGVIAPIDVFIPPGPTGMDPSHTSFFQ 139
Query: 122 ALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSGTIF 179
+L I TKI KG IEI VH++K+G+ ++ ATLL N+ PFSYG+ ++ VYD G I+
Sbjct: 140 SLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLQKFNMKPFSYGVDVRTVYDDGVIY 199
Query: 180 APQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVDF 239
++LDI ED+ KF +GV+ +A++ + G T AS PH V FKN++A+ ++ F
Sbjct: 200 DAKVLDITDEDILEKFSKGVSNVAALSRATGVITEASYPHVFVEAFKNIVALIIDSDYTF 259
Query: 240 EQAKTVKEFLKDPSKFLXXXXXXXXXXXXSNRSEE 274
+ +K+ +++P F + EE
Sbjct: 260 PLMENIKKMVENPEAFAAVAAPASAAKADEPKKEE 294
Score = 159 (61.0 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 29/58 (50%), Positives = 41/58 (70%)
Query: 287 VHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKF 344
VH++K+G+KV S ATLL N+ PFSYG+ ++ VYD G I+ ++LDI ED+ KF
Sbjct: 158 VHLIKQGEKVTASSATLLQKFNMKPFSYGVDVRTVYDDGVIYDAKVLDITDEDILEKF 215
>UNIPROTKB|F8VWS0 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
GO:GO:0005737 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 EMBL:AC004263 HGNC:HGNC:10371 ChiTaRS:RPLP0
IPI:IPI01022174 ProteinModelPortal:F8VWS0 SMR:F8VWS0 PRIDE:F8VWS0
Ensembl:ENST00000546989 ArrayExpress:F8VWS0 Bgee:F8VWS0
Uniprot:F8VWS0
Length = 281
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 107/137 (78%), Positives = 120/137 (87%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGFVFT+ DL E+R+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEII 137
QAL I TKIS+GTIEI+
Sbjct: 139 QALGITTKISRGTIEIL 155
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 56/112 (50%), Positives = 75/112 (66%)
Query: 146 GDSSREATLLNMLNISP-FSYGLIIKMVYDSGTIFAPQILDIRPEDLRVKFLEGVATLAS 204
G + + L I+ S G I +V+D+G+I+ P++LDI E L +FLEGV +AS
Sbjct: 129 GLGPEKTSFFQALGITTKISRGTIEILVFDNGSIYNPEVLDITEETLHSRFLEGVRNVAS 188
Query: 205 VCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVDFEQAKTVKEFLKDPSKFL 256
VCL IGYPTVASVPHSI+NG+K VLA++ T+ F A+ VK FL DPS F+
Sbjct: 189 VCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFV 240
>UNIPROTKB|G3V210 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0005737
EMBL:CH471054 GO:GO:0042254 GO:GO:0005840 EMBL:AC004263
UniGene:Hs.546285 HGNC:HGNC:10371 ChiTaRS:RPLP0
ProteinModelPortal:G3V210 SMR:G3V210 PRIDE:G3V210
Ensembl:ENST00000547173 ArrayExpress:G3V210 Bgee:G3V210
Uniprot:G3V210
Length = 166
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 107/137 (78%), Positives = 120/137 (87%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGFVFT+ DL E+R+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFF 138
Query: 121 QALSIPTKISKGTIEII 137
QAL I TKIS+GTIEI+
Sbjct: 139 QALGITTKISRGTIEIL 155
>DICTYBASE|DDB_G0286501 [details] [associations]
symbol:rplP0 "60S acidic ribosomal protein P0"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0006414
"translational elongation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001790
InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466 dictyBase:DDB_G0286501
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0042254 GO:GO:0005840
EMBL:AAFI02000087 GO:GO:0003735 GO:GO:0006414 eggNOG:COG0244
KO:K02941 OMA:AYMHAFN EMBL:X56194 PIR:S14012 RefSeq:XP_637692.1
STRING:P22685 EnsemblProtists:DDB0219977 GeneID:8625658
KEGG:ddi:DDB_G0286501 ProtClustDB:PTZ00135 Uniprot:P22685
Length = 305
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 115/248 (46%), Positives = 161/248 (64%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
+L Y K V AD VGS Q Q IR+S+ G+G VLMGK TM+RK IR + P L+ L
Sbjct: 18 KLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIRDLADSKPELDAL 77
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
++K N +F + ++ EV+ + +V APA+ G AP V IPA TG+ P +TSF
Sbjct: 78 NTYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIPAGPTGMEPTQTSFL 137
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDSGTI 178
Q L I TKI++G I+I+N+VHI+K G + EATLL LNI PF+YGL K++YD+G
Sbjct: 138 QDLKIATKINRGQIDIVNEVHIIKTGQKVGASEATLLQKLNIKPFTYGLEPKIIYDAGAC 197
Query: 179 FAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVD 238
++P I + EDL KF +G+ +A++ L IGYPTVAS+PHS++N FKN+LA++ T
Sbjct: 198 YSPSISE---EDLINKFKQGIFNIAAISLEIGYPTVASIPHSVMNAFKNLLAISFETSYT 254
Query: 239 FEQAKTVK 246
F+ A+ K
Sbjct: 255 FDAAEKFK 262
Score = 165 (63.1 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 34/61 (55%), Positives = 44/61 (72%)
Query: 284 LNDVHILKEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVK 343
+N+VHI+K G KVG SEATLL LNI PF+YGL K++YD+G ++P I + EDL K
Sbjct: 154 VNEVHIIKTGQKVGASEATLLQKLNIKPFTYGLEPKIIYDAGACYSPSISE---EDLINK 210
Query: 344 F 344
F
Sbjct: 211 F 211
>UNIPROTKB|F8VRK7 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0005737
GO:GO:0042254 GO:GO:0005840 EMBL:AC004263 HGNC:HGNC:10371
ChiTaRS:RPLP0 IPI:IPI01021139 ProteinModelPortal:F8VRK7 SMR:F8VRK7
PRIDE:F8VRK7 Ensembl:ENST00000551258 ArrayExpress:F8VRK7
Bgee:F8VRK7 Uniprot:F8VRK7
Length = 156
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 100/131 (76%), Positives = 112/131 (85%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGFVFT+ DL E+R+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFF 138
Query: 121 QALSI--PTKI 129
QAL + PT I
Sbjct: 139 QALGVYCPTII 149
>UNIPROTKB|F8VQY6 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0005737
GO:GO:0042254 GO:GO:0005840 EMBL:AC004263 HGNC:HGNC:10371
ChiTaRS:RPLP0 IPI:IPI01021889 ProteinModelPortal:F8VQY6 SMR:F8VQY6
Ensembl:ENST00000547475 ArrayExpress:F8VQY6 Bgee:F8VQY6
Uniprot:F8VQY6
Length = 142
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 97/123 (78%), Positives = 108/123 (87%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTSFF 120
LPHI+GNVGFVFT+ DL E+R+ LL NKV A AR GAIAPC VT+PAQNTGLGPEKTSFF
Sbjct: 79 LPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFF 138
Query: 121 QAL 123
QAL
Sbjct: 139 QAL 141
>UNIPROTKB|F8VWV4 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0005737
GO:GO:0042254 GO:GO:0005840 EMBL:AC004263 HGNC:HGNC:10371
ChiTaRS:RPLP0 IPI:IPI01023074 ProteinModelPortal:F8VWV4 SMR:F8VWV4
Ensembl:ENST00000550423 ArrayExpress:F8VWV4 Bgee:F8VWV4
Uniprot:F8VWV4
Length = 111
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 81/107 (75%), Positives = 92/107 (85%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 5 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKL 64
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPA 107
LPHI+GNVGFVFT+ DL E+R+ LL NKV A AR GAIAPC VT+PA
Sbjct: 65 LPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPA 111
>UNIPROTKB|F8VS58 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR001790
Pfam:PF00466 GO:GO:0042254 GO:GO:0005840 EMBL:AC004263
HGNC:HGNC:10371 ChiTaRS:RPLP0 IPI:IPI01020986
ProteinModelPortal:F8VS58 SMR:F8VS58 Ensembl:ENST00000551914
ArrayExpress:F8VS58 Bgee:F8VS58 Uniprot:F8VS58
Length = 121
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 67/89 (75%), Positives = 78/89 (87%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERL 60
QL+D+YPKCF+VGADNVGS+Q Q IR SL G VVLMGKNTMMRKAIRGHLE+NP LE+L
Sbjct: 19 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKL 78
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKV 89
LPHI+GNVGFVFT+ DL E+R+ LL NK+
Sbjct: 79 LPHIRGNVGFVFTKEDLTEIRDMLLANKL 107
>UNIPROTKB|F1LXL8 [details] [associations]
symbol:F1LXL8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006414 "translational elongation" evidence=IEA]
InterPro:IPR001813 Pfam:PF00428 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 IPI:IPI00950373 Ensembl:ENSRNOT00000066180
Uniprot:F1LXL8
Length = 151
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 58/104 (55%), Positives = 74/104 (71%)
Query: 151 EATLLNMLNISPFSYGLIIKMVYDS-GTIFAPQILDIRPEDLRVKFLEGVATLASVCLSI 209
EATLL MLNIS FS+GLII+ V+D+ G+I+ P++L I + FLE + +ASV L I
Sbjct: 10 EATLLYMLNISTFSFGLIIQQVFDNNGSIYNPEVLHITEQTPYSCFLERIHNVASVSLQI 69
Query: 210 GYPTVASVPHSIVNGFKNVLAVAAATEVDFEQAKTVKEFLKDPS 253
GYPTVASVPHSI+NG+K VLA+ TE A+ VK FL +PS
Sbjct: 70 GYPTVASVPHSIINGYKWVLALTVDTEYTSPLAEKVKAFLDNPS 113
Score = 137 (53.3 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 31/57 (54%), Positives = 42/57 (73%)
Query: 291 KEGDKVGPSEATLLNMLNISPFSYGLIIKMVYDS-GTIFAPQILDIRPEDLRVKFLE 346
K G++VG SEATLL MLNIS FS+GLII+ V+D+ G+I+ P++L I + FLE
Sbjct: 1 KIGNQVGASEATLLYMLNISTFSFGLIIQQVFDNNGSIYNPEVLHITEQTPYSCFLE 57
>UNIPROTKB|F8W1K8 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006414
"translational elongation" evidence=IEA] InterPro:IPR001813
Pfam:PF00428 GO:GO:0005840 GO:GO:0003735 GO:GO:0006414
EMBL:AC004263 HGNC:HGNC:10371 ChiTaRS:RPLP0 IPI:IPI01021777
ProteinModelPortal:F8W1K8 SMR:F8W1K8 PRIDE:F8W1K8
Ensembl:ENST00000552292 ArrayExpress:F8W1K8 Bgee:F8W1K8
Uniprot:F8W1K8
Length = 107
Score = 193 (73.0 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 37/60 (61%), Positives = 46/60 (76%)
Query: 197 EGVATLASVCLSIGYPTVASVPHSIVNGFKNVLAVAAATEVDFEQAKTVKEFLKDPSKFL 256
+GV +ASVCL IGYPTVASVPHSI+NG+K VLA++ T+ F A+ VK FL DPS F+
Sbjct: 7 QGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFV 66
>FB|FBgn0033485 [details] [associations]
symbol:RpLP0-like "Ribosomal protein LP0-like" species:7227
"Drosophila melanogaster" [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0006412 "translation" evidence=IC] [GO:0003735
"structural constituent of ribosome" evidence=IC] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR001790 Pfam:PF00466 EMBL:AE013599 GO:GO:0042254
GO:GO:0005840 eggNOG:COG0244 GeneTree:ENSGT00390000006238 KO:K14815
OMA:AWKHSRF EMBL:AY061517 RefSeq:NP_610554.1 UniGene:Dm.12545
SMR:Q7K1Q7 IntAct:Q7K1Q7 STRING:Q7K1Q7 EnsemblMetazoa:FBtr0088425
GeneID:36058 KEGG:dme:Dmel_CG1381 UCSC:CG1381-RA CTD:36058
FlyBase:FBgn0033485 InParanoid:Q7K1Q7 OrthoDB:EOG44TMQV
GenomeRNAi:36058 NextBio:796627 Uniprot:Q7K1Q7
Length = 256
Score = 157 (60.3 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 51/189 (26%), Positives = 86/189 (45%)
Query: 3 VDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAI-RGHLEH-NPGLERL 60
V +YP FV N+ + +++RQ L+ + GKN +M+ + R E P L +L
Sbjct: 34 VGKYPNIFVFQVQNMRNSLLKDLRQELKKNSRFIFGKNRVMQIGLGRTKSEEVEPELHKL 93
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAP-ARNGAIAPCPVTIPAQNT-GLGPEKTS 118
+ G VG +FT EV E EN AR+G +A VT+PA
Sbjct: 94 SKRLTGQVGLLFTDKSKEEVLE-WAENYWAVEYARSGFVATETVTLPAGPLEDFAHSMEP 152
Query: 119 FFQALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSG 176
++L +PTK+ KG + + +D + +EG + +A +L ++ + L +K +
Sbjct: 153 HLRSLGLPTKLEKGIVTLYSDYTVCEEGKVLTPEQARILKLVGKPMAKFRLTMKCSWTKS 212
Query: 177 TIFAPQILD 185
F + D
Sbjct: 213 EGFQLHVED 221
>UNIPROTKB|F1P353 [details] [associations]
symbol:MRTO4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IEA] InterPro:IPR001790
Pfam:PF00466 GO:GO:0005730 GO:GO:0031965 GO:GO:0042254
GO:GO:0005840 EMBL:AADN02040697 GeneTree:ENSGT00390000006238
OMA:AWKHSRF IPI:IPI00587586 Ensembl:ENSGALT00000006360
Uniprot:F1P353
Length = 249
Score = 156 (60.0 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 45/180 (25%), Positives = 82/180 (45%)
Query: 3 VDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAI--RGHLEHNPGLERL 60
VD Y F+ N+ + + +++R + + + GKN +M A+ E+ L ++
Sbjct: 41 VDTYKHIFIFSVANMRNNKLKDVRNAWKH-SRIFFGKNKVMMVALGREPSSEYRENLHQV 99
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTS-F 119
H++G VG +FT EV E K AR G A V++ P
Sbjct: 100 SKHLRGEVGLLFTNRTKEEVDEWFSSFKEVDFARAGNKATYTVSLDTGPLEQFPHSMEPQ 159
Query: 120 FQALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSGT 177
+ L +PT + KG + +++D + KEGD + +A +L + + + IK +++S T
Sbjct: 160 LRQLGLPTALKKGVVTLLSDYEVCKEGDILTPEQARVLKLFGYEMAEFKVTIKFLWNSET 219
>ZFIN|ZDB-GENE-050417-142 [details] [associations]
symbol:mrto4 "mRNA turnover 4 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] InterPro:IPR001790 Pfam:PF00466
ZFIN:ZDB-GENE-050417-142 GO:GO:0042254 GO:GO:0005840 CTD:51154
eggNOG:COG0244 HOGENOM:HOG000177263 HOVERGEN:HBG052510 KO:K14815
OrthoDB:EOG41C6X4 EMBL:BC092913 IPI:IPI00512586
RefSeq:NP_001017657.1 UniGene:Dr.105236 STRING:Q568C9 GeneID:550350
KEGG:dre:550350 InParanoid:Q568C9 NextBio:20879605
ArrayExpress:Q568C9 Uniprot:Q568C9
Length = 242
Score = 155 (59.6 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 49/177 (27%), Positives = 81/177 (45%)
Query: 4 DEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAI-RGHL-EHNPGLERLL 61
D Y FV +N+ + + ++IR + GKN +M A+ +G E+ L +L
Sbjct: 35 DIYRYVFVFSVENMRNNKLKDIRTAWRH-SRFFFGKNKVMMIALGKGPTDEYKDNLHKLS 93
Query: 62 PHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPAQNTGLGPEKTS-FF 120
++G VG +FT +EV+E K AR G A VT+ P
Sbjct: 94 RFLRGEVGVLFTNKTKDEVQEYFGNFKEVDYARAGNTASMAVTLDEGPLDQFPHSMEPQL 153
Query: 121 QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNISPFSYGLIIKMVYDS 175
+ L +PT + KG + +I D + KEGD+ +A +L + + L IK +++S
Sbjct: 154 RQLGLPTALKKGAVTLIKDFEVCKEGDTLTPEQARILKLFGFEMAEFKLSIKCMWNS 210
>MGI|MGI:1917152 [details] [associations]
symbol:Mrto4 "MRT4, mRNA turnover 4, homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR001790
Pfam:PF00466 MGI:MGI:1917152 GO:GO:0005730 GO:GO:0031965
GO:GO:0042254 CTD:51154 eggNOG:COG0244 GeneTree:ENSGT00390000006238
HOGENOM:HOG000177263 HOVERGEN:HBG052510 KO:K14815 OMA:AWKHSRF
OrthoDB:EOG41C6X4 EMBL:AK011387 EMBL:BC005734 IPI:IPI00132578
RefSeq:NP_076025.1 UniGene:Mm.27871 UniGene:Mm.296860
UniGene:Mm.441201 ProteinModelPortal:Q9D0I8 SMR:Q9D0I8
STRING:Q9D0I8 PhosphoSite:Q9D0I8 PaxDb:Q9D0I8 PRIDE:Q9D0I8
Ensembl:ENSMUST00000102503 GeneID:69902 KEGG:mmu:69902
InParanoid:Q9D0I8 NextBio:330573 Bgee:Q9D0I8 CleanEx:MM_MRTO4
Genevestigator:Q9D0I8 GermOnline:ENSMUSG00000028741 Uniprot:Q9D0I8
Length = 239
Score = 153 (58.9 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 49/192 (25%), Positives = 88/192 (45%)
Query: 3 VDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAI-RGHL-EHNPGLERL 60
VD Y F+ N+ + + ++IR + + + GKN +M A+ R E+ L ++
Sbjct: 34 VDTYKYLFIFSVANMRNSKLKDIRNAWKH-SRMFFGKNKVMMVALGRSPSDEYKDNLHQV 92
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTI-PAQNTGLGPEKTSF 119
++G VG +FT EV E + AR G A V++ P
Sbjct: 93 SKKLRGEVGLLFTNRTKEEVNEWFTKYTEMDFARAGNKATLTVSLDPGPLKQFPHSMEPQ 152
Query: 120 FQALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSGT 177
+ L +PT + KG + +++D + KEGD + +A +L + + +IIK ++D+ +
Sbjct: 153 LRQLGLPTALKKGVVTLLSDYEVCKEGDVLTPEQARILKLFGYEMAEFKVIIKYMWDAQS 212
Query: 178 IFAPQILDIRPE 189
Q+ D PE
Sbjct: 213 GRFQQMDDDLPE 224
>UNIPROTKB|Q9UKD2 [details] [associations]
symbol:MRTO4 "mRNA turnover protein 4 homolog" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0031965 "nuclear membrane" evidence=IDA]
InterPro:IPR001790 Pfam:PF00466 GO:GO:0005730 EMBL:CH471134
GO:GO:0031965 GO:GO:0042254 EMBL:AL035413 CTD:51154 eggNOG:COG0244
HOGENOM:HOG000177263 HOVERGEN:HBG052510 KO:K14815 OMA:AWKHSRF
OrthoDB:EOG41C6X4 EMBL:AF173378 EMBL:AY303790 EMBL:AK024227
EMBL:AK027569 EMBL:BC003013 EMBL:BC006504 IPI:IPI00106491
RefSeq:NP_057267.2 UniGene:Hs.463797 ProteinModelPortal:Q9UKD2
SMR:Q9UKD2 IntAct:Q9UKD2 STRING:Q9UKD2 PhosphoSite:Q9UKD2
DMDM:51316541 SWISS-2DPAGE:Q9UKD2 PaxDb:Q9UKD2 PeptideAtlas:Q9UKD2
PRIDE:Q9UKD2 DNASU:51154 Ensembl:ENST00000330263 GeneID:51154
KEGG:hsa:51154 UCSC:uc001bbs.3 GeneCards:GC01P019578
HGNC:HGNC:18477 HPA:HPA026438 HPA:HPA026446 neXtProt:NX_Q9UKD2
PharmGKB:PA162396216 InParanoid:Q9UKD2 PhylomeDB:Q9UKD2
ChiTaRS:MRTO4 GenomeRNAi:51154 NextBio:54049 Bgee:Q9UKD2
CleanEx:HS_MRTO4 Genevestigator:Q9UKD2 GermOnline:ENSG00000053372
Uniprot:Q9UKD2
Length = 239
Score = 148 (57.2 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 48/192 (25%), Positives = 87/192 (45%)
Query: 3 VDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAI-RGHL-EHNPGLERL 60
VD Y F+ N+ + + ++IR + + + GKN +M A+ R E+ L ++
Sbjct: 34 VDTYKYLFIFSVANMRNSKLKDIRNAWKH-SRMFFGKNKVMMVALGRSPSDEYKDNLHQV 92
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTI-PAQNTGLGPEKTSF 119
++G VG +FT EV E + AR G A V++ P
Sbjct: 93 SKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQ 152
Query: 120 FQALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSGT 177
+ L +PT + +G + +++D + KEGD + +A +L + + + IK ++DS +
Sbjct: 153 LRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQS 212
Query: 178 IFAPQILDIRPE 189
Q+ D PE
Sbjct: 213 GRFQQMGDDLPE 224
>UNIPROTKB|G4MVM1 [details] [associations]
symbol:MGG_08908 "mRNA turnover protein 4" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR001790 Pfam:PF00466 GO:GO:0042254
GO:GO:0005840 EMBL:CM001232 KO:K14815 RefSeq:XP_003713937.1
EnsemblFungi:MGG_08908T0 GeneID:2679894 KEGG:mgr:MGG_08908
Uniprot:G4MVM1
Length = 251
Score = 145 (56.1 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 55/213 (25%), Positives = 95/213 (44%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAI--RGHLEHNPGLE 58
+ V +Y FV DN+ + +++R+ L G + GK +M +A+ E GL
Sbjct: 32 ECVPQYQHLFVFSVDNMRNNNLKDVRRELSGDSRMFFGKTKLMARALGQTAEDEQAEGLH 91
Query: 59 RLLPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIP---AQNTGLG-- 113
+L H+ G VG +FT +E+ L AR GA+AP +IP +TG G
Sbjct: 92 KLTSHLAGTVGLIFTNRPASELLSYLDSITSVDFARAGAVAPRDFSIPPGVVYSTG-GEV 150
Query: 114 PEKTSF---------FQALSIPTKISKGTIEIIND-------VHILKEGD--SSREATLL 155
P++ + L +PT++ KG + + + + +EGD SR+ LL
Sbjct: 151 PQEYDVPLAHSIEPELRKLGVPTRLIKGRVVLGGENGEGSTGYDVCREGDVLDSRQTRLL 210
Query: 156 NMLNISPFSYGLIIKMVYDSGTIFAPQILDIRP 188
+ ++ FS I + Y S ++ ++ P
Sbjct: 211 KLFSVC-FSEFKIQVLAYWSAA--TGEVTEVNP 240
>UNIPROTKB|A4FV84 [details] [associations]
symbol:MRTO4 "mRNA turnover protein 4 homolog" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0005730
GO:GO:0031965 GO:GO:0042254 EMBL:BC123852 IPI:IPI00718277
RefSeq:NP_001076868.1 UniGene:Bt.22192 STRING:A4FV84 PRIDE:A4FV84
Ensembl:ENSBTAT00000015861 GeneID:509932 KEGG:bta:509932 CTD:51154
eggNOG:COG0244 GeneTree:ENSGT00390000006238 HOGENOM:HOG000177263
HOVERGEN:HBG052510 InParanoid:A4FV84 KO:K14815 OMA:AWKHSRF
OrthoDB:EOG41C6X4 NextBio:20869201 Uniprot:A4FV84
Length = 239
Score = 143 (55.4 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 48/192 (25%), Positives = 86/192 (44%)
Query: 3 VDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAI-RGHL-EHNPGLERL 60
VD Y F+ N+ + + ++IR + + + GKN +M A+ R E+ L ++
Sbjct: 34 VDTYKYLFIFSVANMRNSKLKDIRNAWKH-SRMFFGKNKVMMVALGRSPSDEYKDNLHQV 92
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTI-PAQNTGLGPEKTSF 119
++G VG +FT EV E + AR G A V + P
Sbjct: 93 SKKLRGEVGLLFTNRTKEEVDEWFTKYTEMDYARAGNKATFTVNLDPGPLEQFPHSMEPQ 152
Query: 120 FQALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSGT 177
+ L +PT + KG + +++D + KEGD + +A +L + + + IK ++D+ +
Sbjct: 153 LRQLGLPTALKKGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVSIKYMWDAQS 212
Query: 178 IFAPQILDIRPE 189
Q+ D PE
Sbjct: 213 GRFQQMGDDLPE 224
>UNIPROTKB|E2RG17 [details] [associations]
symbol:MRTO4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR001790 Pfam:PF00466
GO:GO:0042254 GO:GO:0005840 CTD:51154 GeneTree:ENSGT00390000006238
KO:K14815 OMA:AWKHSRF EMBL:AAEX03001814 RefSeq:XP_544532.2
Ensembl:ENSCAFT00000024114 GeneID:487406 KEGG:cfa:487406
NextBio:20861004 Uniprot:E2RG17
Length = 240
Score = 142 (55.0 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 44/178 (24%), Positives = 81/178 (45%)
Query: 3 VDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAI-RGHL-EHNPGLERL 60
VD Y F+ N+ + + ++IR + + + GKN +M A+ R E+ L ++
Sbjct: 34 VDTYKYLFIFSVANMRNSKLKDIRNAWKH-SRMFFGKNKVMMVALGRSPADEYKDNLHQV 92
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTI-PAQNTGLGPEKTSF 119
+KG VG +FT EV E + AR G A VT+ P
Sbjct: 93 SKKLKGEVGLLFTNRTKEEVNEWFTKYTEMDFARAGNKATFTVTLDPGPLEQFPHSMEPQ 152
Query: 120 FQALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDS 175
+ L +PT + +G + +++D + KEGD + +A +L + + + I+ ++D+
Sbjct: 153 LRQLGLPTALKRGVVTLLSDHEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIRYMWDA 210
>UNIPROTKB|F1SUQ2 [details] [associations]
symbol:MRTO4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR001790
Pfam:PF00466 GO:GO:0005730 GO:GO:0031965 GO:GO:0042254
GO:GO:0005840 CTD:51154 GeneTree:ENSGT00390000006238 KO:K14815
OMA:AWKHSRF EMBL:FP236131 RefSeq:NP_001230644.1 UniGene:Ssc.6624
Ensembl:ENSSSCT00000003877 GeneID:100511136 KEGG:ssc:100511136
Uniprot:F1SUQ2
Length = 241
Score = 140 (54.3 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 46/192 (23%), Positives = 86/192 (44%)
Query: 3 VDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAI-RGHLE-HNPGLERL 60
VD Y F+ N+ + + ++IR + + + GKN +M A+ R E + L ++
Sbjct: 34 VDTYKFLFIFSVANMRNSKLKDIRNAWKH-SRMFFGKNKVMMVALGRSPCEEYRDNLHQV 92
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTI-PAQNTGLGPEKTSF 119
++G VG +FT EV E + AR G A V + P
Sbjct: 93 SKKLRGEVGLLFTNRTKEEVNEWFTKYGEMDYARAGNKATFTVNLDPGPLEQFPHSMEPQ 152
Query: 120 FQALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSGT 177
+ L +PT + KG + +++D + KEGD + +A +L + + + I+ ++D+ +
Sbjct: 153 LRQLGLPTTLKKGVVTLLSDYEVCKEGDVLTPEQARILKLFGYEMAEFKVTIRYMWDAQS 212
Query: 178 IFAPQILDIRPE 189
++ D PE
Sbjct: 213 GRFQEMGDDLPE 224
>WB|WBGene00017347 [details] [associations]
symbol:F10E7.5 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] InterPro:IPR001790 Pfam:PF00466
GO:GO:0042254 GO:GO:0005840 eggNOG:COG0244
GeneTree:ENSGT00390000006238 HOGENOM:HOG000177263 KO:K14815
OMA:AWKHSRF EMBL:FO081111 PIR:T34209 RefSeq:NP_495470.1
ProteinModelPortal:Q19302 SMR:Q19302 STRING:Q19302 PaxDb:Q19302
EnsemblMetazoa:F10E7.5 GeneID:174168 KEGG:cel:CELE_F10E7.5
UCSC:F10E7.5 CTD:174168 WormBase:F10E7.5 InParanoid:Q19302
NextBio:882821 Uniprot:Q19302
Length = 220
Score = 138 (53.6 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 45/173 (26%), Positives = 73/173 (42%)
Query: 3 VDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHL--EHNPGLERL 60
VD+Y F+ N+ S +F IRQ + GKN ++ A+ E+ L +
Sbjct: 34 VDQYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKNNVISIALGKQKSDEYANQLHKA 93
Query: 61 LPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIP-AQNTGLGPEKTSF 119
+KG G +FT EV + E + AR G +A V +P +
Sbjct: 94 SAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPEGPISQFAFSMEPQ 153
Query: 120 FQALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIK 170
+ L +PTK+ KG I + + KEG+ + +A +L + + LI K
Sbjct: 154 LRKLGLPTKLDKGVITLYQQFEVCKEGEPLTVEQAKILKHFEVKMSQFRLIFK 206
>RGD|1311709 [details] [associations]
symbol:Mrto4 "mRNA turnover 4 homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0005840 "ribosome"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR001790 Pfam:PF00466 RGD:1311709 GO:GO:0042254
GO:GO:0005840 GeneTree:ENSGT00390000006238 IPI:IPI00365290
Ensembl:ENSRNOT00000024326 UCSC:RGD:1311709 Uniprot:F1LTU4
Length = 203
Score = 135 (52.6 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 45/185 (24%), Positives = 84/185 (45%)
Query: 10 FVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAI-RGHL-EHNPGLERLLPHIKGN 67
F+ N+ + + ++IR + + + GKN +M A+ R E+ L ++ ++G
Sbjct: 4 FIFSVANMRNSKLKDIRNAWKH-SRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGE 62
Query: 68 VGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTI-PAQNTGLGPEKTSFFQALSIP 126
VG +FT EV E + AR G A V++ P + L +P
Sbjct: 63 VGLLFTNRTKEEVNEWFTKYTEMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGLP 122
Query: 127 TKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDSGTIFAPQIL 184
T + KG + +++D + KEGD + +A +L + + + IK ++D+ + Q+
Sbjct: 123 TALKKGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDAQSGRFQQMD 182
Query: 185 DIRPE 189
D PE
Sbjct: 183 DDLPE 187
>UNIPROTKB|F1M7E2 [details] [associations]
symbol:F1M7E2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006414 "translational elongation" evidence=IEA]
InterPro:IPR001813 Pfam:PF00428 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 IPI:IPI00391041 Ensembl:ENSRNOT00000037986
Uniprot:F1M7E2
Length = 127
Score = 123 (48.4 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 33/92 (35%), Positives = 52/92 (56%)
Query: 166 GLIIKMVYDSGTIFAPQILDIRPEDLRVKFLEGVATLASVCLSIGYPTVASVPHSIVNGF 225
G++IK V+ +G+++ P++LDI D +FLEGV +ASV LS + ++ +
Sbjct: 1 GILIKEVFHNGSLYNPEVLDISA-DSHFRFLEGVRHIASVPLSADWLPDCCFRGTLYRQW 59
Query: 226 KNV-LAVAAATEVDFEQAKTVKEFLKDPSKFL 256
V A + TE F A+ VK FL +PS F+
Sbjct: 60 IQVDPAWSVETEYTFPLAEKVKAFLANPSAFV 91
>TAIR|locus:2032970 [details] [associations]
symbol:AT1G25260 "AT1G25260" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005840 "ribosome" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0022626 "cytosolic ribosome"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510 "RNA
methylation" evidence=RCA] InterPro:IPR001790 Pfam:PF00466
EMBL:CP002684 GO:GO:0042254 GO:GO:0022626 HOGENOM:HOG000177263
KO:K14815 OMA:AWKHSRF EMBL:AY045969 EMBL:AY079322 EMBL:AY088374
IPI:IPI00529475 RefSeq:NP_564226.1 UniGene:At.21571
ProteinModelPortal:Q94AK8 IntAct:Q94AK8 STRING:Q94AK8 PRIDE:Q94AK8
EnsemblPlants:AT1G25260.1 GeneID:839109 KEGG:ath:AT1G25260
TAIR:At1g25260 InParanoid:Q94AK8 PhylomeDB:Q94AK8
ProtClustDB:CLSN2687949 ArrayExpress:Q94AK8 Genevestigator:Q94AK8
Uniprot:Q94AK8
Length = 235
Score = 137 (53.3 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 46/201 (22%), Positives = 93/201 (46%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHN--PGLE 58
+ V++Y +V +N+ + +F+ RQ G +G N +M+ A+ E G+
Sbjct: 32 EAVEKYSSVYVFSFENMRNIKFKEFRQQFRHNGKFFLGSNKVMQVALGRSAEDELRSGIY 91
Query: 59 RLLPHIKGNVGFVFTRGDLNEVREKLLENKVQAP-ARNGAIAPCPVTI---PAQNTGLGP 114
++ ++G+ G + T EV E L + +R G+IA V + P +
Sbjct: 92 KVSKLLRGDTGLLVTDMPKEEV-ESLFNAYEDSDFSRTGSIAVETVELKEGPLEQ--FTH 148
Query: 115 EKTSFFQALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNI--SPFSYGLIIK 170
E + L +P +++KGT+E++ D + +EG S + A +L +L + + F L+ +
Sbjct: 149 EMEPLLRKLEMPVRLNKGTVELVADFVVCEEGKQLSPKSAHILRLLRMKMATFKLNLLCR 208
Query: 171 MVYDSGTIFAPQILDIRPEDL 191
++ + ++ EDL
Sbjct: 209 WSPSDFELYREDLSELYREDL 229
>POMBASE|SPBC11G11.03 [details] [associations]
symbol:mrt4 "mRNA turnover and ribosome assembly
protein Mrt4 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0000027 "ribosomal large subunit assembly" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0006402 "mRNA catabolic
process" evidence=ISO] InterPro:IPR001790 Pfam:PF00466
PomBase:SPBC11G11.03 GO:GO:0005730 EMBL:CU329671 GO:GO:0006402
GO:GO:0006364 GO:GO:0000027 eggNOG:COG0244 HOGENOM:HOG000177263
KO:K14815 OMA:AWKHSRF PIR:T39330 RefSeq:NP_595721.1 STRING:Q9USZ6
EnsemblFungi:SPBC11G11.03.1 GeneID:2539913 KEGG:spo:SPBC11G11.03
OrthoDB:EOG4KH643 NextBio:20801056 Uniprot:Q9USZ6
Length = 241
Score = 132 (51.5 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 50/180 (27%), Positives = 79/180 (43%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHL---EHNPGL 57
Q +D + ++ N+ + + IR +G + MGK +M KA+ GH EH +
Sbjct: 32 QSLDSFDYMWIFDVTNMRNTYLKRIRDDWKG-SRIFMGKTKVMAKAL-GHTPEEEHAENV 89
Query: 58 ERLLPHIKGNVGFVFTRGDLNEVREKLLENKVQAP-ARNGAIAPCPVTIPA----QNTGL 112
+L + G VG +FT +EV E+ VQ AR GA+AP IPA G
Sbjct: 90 SKLTKLLHGAVGLLFTNSKPDEVIG-YFESFVQNDFARAGAVAPFTHVIPAGPVYSRAGQ 148
Query: 113 GPEKTSFF---------QALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLNIS 161
P + + L +PT + G + ++ D + EG SR+ LL + I+
Sbjct: 149 IPVEDDILLTHTLEPQVRQLGMPTVLKNGVVTLLADFPLCTEGQQLDSRQTRLLKLFGIT 208
>SGD|S000001492 [details] [associations]
symbol:MRT4 "Protein involved in mRNA turnover and ribosome
assembly" species:4932 "Saccharomyces cerevisiae" [GO:0042273
"ribosomal large subunit biogenesis" evidence=IMP;IPI] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0000956 "nuclear-transcribed mRNA
catabolic process" evidence=IMP] [GO:0070180 "LSU rRNA binding"
evidence=ISA] [GO:0000027 "ribosomal large subunit assembly"
evidence=IGI;IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] [GO:0005730 "nucleolus" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005622 "intracellular" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR001790
Pfam:PF00466 SGD:S000001492 GO:GO:0005654 GO:GO:0005730
EMBL:BK006944 GO:GO:0030687 GO:GO:0000956 EMBL:S53418 GO:GO:0006364
GO:GO:0000027 EMBL:X61398 EMBL:S59773 eggNOG:COG0244
GeneTree:ENSGT00390000006238 HOGENOM:HOG000177263 KO:K14815
OMA:AWKHSRF OrthoDB:EOG4KH643 EMBL:Z28009 PIR:S30013
RefSeq:NP_012916.1 ProteinModelPortal:P33201 SMR:P33201
DIP:DIP-5283N IntAct:P33201 MINT:MINT-573561 STRING:P33201
PaxDb:P33201 PeptideAtlas:P33201 EnsemblFungi:YKL009W GeneID:853860
KEGG:sce:YKL009W CYGD:YKL009w NextBio:975109 Genevestigator:P33201
GermOnline:YKL009W GO:GO:0070180 Uniprot:P33201
Length = 236
Score = 128 (50.1 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 53/194 (27%), Positives = 87/194 (44%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAI--RGHLEHNPGLE 58
+ +D Y +V+ D+V + Q IR S G ++MGK +++KA+ + E+ L
Sbjct: 32 EALDTYRYVWVLHLDDVRTPVLQEIRTSWAG-SKLIMGKRKVLQKALGEKREEEYKENLY 90
Query: 59 RLLPHIKGNVGFVFTRGDLNEVREKLLENKVQAP-ARNGAIAPCPVTIPA----QNTGLG 113
+L G G +FT D+N V+E ++ V++ +R AP TIP G
Sbjct: 91 QLSKLCSGVTGLLFTDEDVNTVKE-YFKSYVRSDYSRPNTKAPLTFTIPEGIVYSRGGQI 149
Query: 114 P--EKTSFFQALS--------IPTKISKGTIEIINDVHILKEGDSS--REATLLNMLNIS 161
P E +L IPTKI G I I + + EG+ R+A +L I+
Sbjct: 150 PAEEDVPMIHSLEPTMRNKFEIPTKIKAGKITIDSPYLVCTEGEKLDVRQALILKQFGIA 209
Query: 162 PFSYGLIIKMVYDS 175
+ + + YD+
Sbjct: 210 ASEFKVKVSAYYDN 223
>UNIPROTKB|J9NSQ8 [details] [associations]
symbol:MRTO4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR001790 Pfam:PF00466
GO:GO:0042254 GO:GO:0005840 GeneTree:ENSGT00390000006238
EMBL:AAEX03001814 Ensembl:ENSCAFT00000047569 Uniprot:J9NSQ8
Length = 193
Score = 121 (47.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 37/146 (25%), Positives = 66/146 (45%)
Query: 35 VLMGKNTMMRKAI-RGHL-EHNPGLERLLPHIKGNVGFVFTRGDLNEVREKLLENKVQAP 92
+ GKN +M A+ R E+ L ++ +KG VG +FT EV E +
Sbjct: 18 MFFGKNKVMMVALGRSPADEYKDNLHQVSKKLKGEVGLLFTNRTKEEVNEWFTKYTEMDF 77
Query: 93 ARNGAIAPCPVTI-PAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKEGD--SS 149
AR G A VT+ P + L +PT + +G + +++D + KEGD +
Sbjct: 78 ARAGNKATFTVTLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDHEVCKEGDVLTP 137
Query: 150 REATLLNMLNISPFSYGLIIKMVYDS 175
+A +L + + + I+ ++D+
Sbjct: 138 EQARVLKLFGYEMAEFKVTIRYMWDA 163
>UNIPROTKB|F1M970 [details] [associations]
symbol:F1M970 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005840 "ribosome" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR001790
Pfam:PF00466 GO:GO:0042254 GO:GO:0005840
GeneTree:ENSGT00390000006238 IPI:IPI00779080
Ensembl:ENSRNOT00000055679 Uniprot:F1M970
Length = 232
Score = 123 (48.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 39/176 (22%), Positives = 76/176 (43%)
Query: 3 VDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHNPGLERLLP 62
VD Y F+ N+ + + ++IR + + K M+ E+ L ++
Sbjct: 33 VDTYKYLFIFSMANMRNSKLKDIRNAWKHSRKFFGNKVIMVALGRSPSDEYKDNLHQVHK 92
Query: 63 HIKGNVGFVFTRGDLNEVREKLLENKVQAPARNG-AIAPCPVTIPAQNTGLGPEKTSFFQ 121
++G VG +FT EV E + AR G ++P P + + P+ +
Sbjct: 93 KLRGEVGLLFTNRRKEEVNEWFTKYTEMDFARGGNKVSPDPGPLKQFPHSMEPQ----LR 148
Query: 122 ALSIPTKISKGTIEIINDVHILKEGD--SSREATLLNMLNISPFSYGLIIKMVYDS 175
L +PT + G + +++D + KEGD + +A +L + + IK ++D+
Sbjct: 149 QLGLPTALKNGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAESRVTIKFMWDA 204
>DICTYBASE|DDB_G0276411 [details] [associations]
symbol:mrt4 "mRNA turnover protein 4" species:44689
"Dictyostelium discoideum" [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001790
Pfam:PF00466 dictyBase:DDB_G0276411 GO:GO:0005730
GenomeReviews:CM000151_GR GO:GO:0042254 EMBL:AAFI02000015
eggNOG:COG0244 KO:K14815 OMA:AWKHSRF RefSeq:XP_643104.1
STRING:Q86HD3 PRIDE:Q86HD3 EnsemblProtists:DDB0252706
GeneID:8620508 KEGG:ddi:DDB_G0276411 ProtClustDB:CLSZ2430892
Uniprot:Q86HD3
Length = 223
Score = 118 (46.6 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 38/172 (22%), Positives = 78/172 (45%)
Query: 2 LVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGHLEHN---PGLE 58
+VD+Y ++ +N+ + + +++R L GKN ++ + G E + P L
Sbjct: 33 IVDQYKFIYLFTFENMRNNKLKSVRTEWS-TSKFLFGKNKVLSVGL-GKSEEDELKPNLH 90
Query: 59 RLLPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIP-AQNTGLGPEKT 117
+L H++G G FT ++V E + R+G ++ +TI G+
Sbjct: 91 KLTEHLEGECGLFFTNEPKDKVFEYFTNYSEKDFPRSGFVSEETITIKEGPIVGMTHSME 150
Query: 118 SFFQALSIPTKISKGTIEIINDVHILKEGDS--SREATLLNMLN--ISPFSY 165
++ + L +PT + G I + + + + G + ++ LL + N IS F +
Sbjct: 151 TYLRGLGLPTTLKNGVIFVDREYTLCEAGVAVTPEQSQLLKLFNHEISEFKF 202
>ASPGD|ASPL0000002010 [details] [associations]
symbol:AN6902 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=IEA]
InterPro:IPR001790 Pfam:PF00466 GO:GO:0042254 GO:GO:0005840
EMBL:BN001301 EMBL:AACD01000113 eggNOG:COG0244 HOGENOM:HOG000177263
KO:K14815 OMA:AWKHSRF OrthoDB:EOG4KH643 RefSeq:XP_664506.1
STRING:Q5AXS8 EnsemblFungi:CADANIAT00007704 GeneID:2870607
KEGG:ani:AN6902.2 Uniprot:Q5AXS8
Length = 246
Score = 87 (35.7 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 31/110 (28%), Positives = 48/110 (43%)
Query: 1 QLVDEYPKCFVVGADNVGSRQFQNIRQSLEGLGVVLMGKNTMMRKAIRGH---LEHNPGL 57
+ V++Y FV DN+ + +++R + GK +M A+ GH E L
Sbjct: 33 ECVEKYDHLFVFSVDNMRNTYLKDVRTEFAD-SRLFFGKTKVMAVAL-GHNPETEAAENL 90
Query: 58 ERLLPHIKGNVGFVFTRGDLNEVREKLLENKVQAPARNGAIAPCPVTIPA 107
L P++ G VG +FT D V + + AR G A +IPA
Sbjct: 91 HLLTPYLTGAVGLLFTSRDPASVTDYFDAFRPLDFARAGTEATRSFSIPA 140
Score = 65 (27.9 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 30/111 (27%), Positives = 52/111 (46%)
Query: 93 ARNGAIAPCPVTIPAQNTGLGPEKTSFFQALSIPTKISKGTIEI-INDVH----ILKEGD 147
+R G I P P +T + PE + L +PT++ KG + + + D + K+G+
Sbjct: 145 SRAGEI-PTSEDEPVSHT-IEPE----LRKLGVPTRLVKGKVMLELTDGQEGYPVCKKGE 198
Query: 148 --SSREATLLNMLNI--SPFSYGLIIKMVYDSGTIFAPQILDIRPEDLRVK 194
SR+ TLL M + S F GL +G + +IL+ ++ V+
Sbjct: 199 ILDSRQTTLLKMFGVQTSEFRVGLKAHWARATGKV---EILEKNENEMEVE 246
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.138 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 346 334 0.00091 116 3 11 22 0.40 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 60
No. of states in DFA: 566 (60 KB)
Total size of DFA: 177 KB (2103 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.88u 0.11s 25.99t Elapsed: 00:00:01
Total cpu time: 25.88u 0.11s 25.99t Elapsed: 00:00:01
Start: Thu Aug 15 13:28:42 2013 End: Thu Aug 15 13:28:43 2013