BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17476
(513 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/94 (64%), Positives = 76/94 (80%), Gaps = 2/94 (2%)
Query: 411 RPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDD 468
+ P+TAGL + WEIDP +L L+ELG+GQFGVV+ GKWRG DVA M+KEG+MSED+
Sbjct: 6 KNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE 65
Query: 469 FIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
FIEEAKVM L H+ LVQLYGVC+K RPI+I+T+
Sbjct: 66 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+VL Y++FSSKSD+WA+GVLMWE+++ GKMPY R N+E + + +G+ L +P
Sbjct: 191 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP 243
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G LLNYLR + LL+MC VC+ M YLE ++HR+
Sbjct: 101 MANGCLLNYLREMRHRF--QTQQLLEMCKDVCEAMEYLESKQFLHRD 145
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/94 (64%), Positives = 76/94 (80%), Gaps = 2/94 (2%)
Query: 411 RPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDD 468
+ P+TAGL + WEIDP +L L+ELG+GQFGVV+ GKWRG DVA M+KEG+MSED+
Sbjct: 6 KNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE 65
Query: 469 FIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
FIEEAKVM L H+ LVQLYGVC+K RPI+I+T+
Sbjct: 66 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+VL Y++FSSKSD+WA+GVLMWE+++ GKMPY R N+E + + +G+ L +P
Sbjct: 191 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP 243
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G LLNYLR + LL+MC VC+ M YLE ++HR+
Sbjct: 101 MANGCLLNYLREMRHRF--QTQQLLEMCKDVCEAMEYLESKQFLHRD 145
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 73/90 (81%), Gaps = 2/90 (2%)
Query: 415 ATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEE 472
TAGL + WEIDP +L L+ELG+GQFGVV+ GKWRG DVA M+KEG+MSED+FIEE
Sbjct: 1 GTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEE 60
Query: 473 AKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
AKVM L H+ LVQLYGVC+K RPI+I+T+
Sbjct: 61 AKVMMNLSHEKLVQLYGVCTKQRPIFIITE 90
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+VL Y++FSSKSD+WA+GVLMWE+++ GKMPY R N+E + + +G+ L +P
Sbjct: 182 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP 234
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G LLNYLR + LL+MC VC+ M YLE ++HR+
Sbjct: 92 MANGCLLNYLREMRHRF--QTQQLLEMCKDVCEAMEYLESKQFLHRD 136
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 109/180 (60%), Gaps = 7/180 (3%)
Query: 331 VKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIP 387
++ G F+VR S +TKG Y LS+ + +VKHY I++ G F+++ + +S+
Sbjct: 84 AENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQ 143
Query: 388 EVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRR 447
++V Y+ ++ GL RL T+ C P T GL+ D WEI L L +LG G FG V
Sbjct: 144 QLVAYYSKHADGLCHRL-TTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWM 202
Query: 448 GKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
G W G+ VA+ +K GTMS + F++EA+VM +L+H+ LVQLY V S+ PIYIVT+ S
Sbjct: 203 GTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMS 261
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
Y RF+ KSDVW++G+L+ E+ T G++PY + N EV+D+V+RG + P
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 403
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
VALY +++ DLS +KG +++++T+ WW G GYIPSNYV
Sbjct: 4 TFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYV 56
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
M GSLL++L+ E + L+DM Q+ GMAY+ER NY+HR+ + +
Sbjct: 260 MSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 309
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW 108
VALY +++ DLS +KG +++++T+ WW
Sbjct: 4 TFVALYDYESRTETDLSFKKGERLQIVNNTEGDWW 38
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 109/180 (60%), Gaps = 7/180 (3%)
Query: 331 VKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIP 387
++ G F+VR S +TKG Y LS+ + +VKHY I++ G F+++ + +S+
Sbjct: 84 AENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQ 143
Query: 388 EVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRR 447
++V Y+ ++ GL RL T+ C P T GL+ D WEI L L +LG G FG V
Sbjct: 144 QLVAYYSKHADGLCHRL-TTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWM 202
Query: 448 GKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
G W G+ VA+ +K GTMS + F++EA+VM +L+H+ LVQLY V S+ PIYIVT+ S
Sbjct: 203 GTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMS 261
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
Y RF+ KSDVW++G+L+ E+ T G++PY + N EV+D+V+RG + P
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 403
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
VALY +++ DLS +KG +++++T+ WW G GYIPSNYV
Sbjct: 4 TFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYV 56
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
M GSLL++L+ E + L+DM Q+ GMAY+ER NY+HR+ + +
Sbjct: 260 MSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 309
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW 108
VALY +++ DLS +KG +++++T+ WW
Sbjct: 4 TFVALYDYESRTETDLSFKKGERLQIVNNTEGDWW 38
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 108/177 (61%), Gaps = 7/177 (3%)
Query: 331 VKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIP 387
++ G F+VR S +TKG Y LS+ + +VKHY I++ G F+++ + +S+
Sbjct: 167 AENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQ 226
Query: 388 EVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRR 447
++V Y+ ++ GL RL T+ C P T GL+ D WEI L L +LG G FG V
Sbjct: 227 QLVAYYSKHADGLCHRL-TTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWM 285
Query: 448 GKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
G W G+ VA+ +K GTMS + F++EA+VM +L+H+ LVQLY V S+ PIYIVT+
Sbjct: 286 GTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTE 341
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
Y RF+ KSDVW++G+L+ E+ T G++PY + N EV+D+V+RG + P
Sbjct: 438 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 486
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKEKELLG 185
VALY +++ DLS +KG +++++T+ WW G GYIPSNYV + +
Sbjct: 87 TFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDSIQ 146
Query: 186 LQKY 189
+++
Sbjct: 147 AEEW 150
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
M GSLL++L+ E + L+DM Q+ GMAY+ER NY+HR+ + +
Sbjct: 343 MSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 392
Score = 32.0 bits (71), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW 108
VALY +++ DLS +KG +++++T+ WW
Sbjct: 87 TFVALYDYESRTETDLSFKKGERLQIVNNTEGDWW 121
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQH 481
WEIDP +L L+ELG+GQFGVV+ GKWRG DVA M+KEG+MSED+FIEEAKVM L H
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSH 63
Query: 482 QNLVQLYGVCSKHRPIYIVTD 502
+ LVQLYGVC+K RPI+I+T+
Sbjct: 64 EKLVQLYGVCTKQRPIFIITE 84
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+VL Y++FSSKSD+WA+GVLMWE+++ GKMPY R N+E + + +G+ L +P
Sbjct: 176 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP 228
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G LLNYLR + LL+MC VC+ M YLE ++HR+
Sbjct: 86 MANGCLLNYLREMRHRF--QTQQLLEMCKDVCEAMEYLESKQFLHRD 130
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQH 481
WEIDP +L L+ELG+GQFGVV+ GKWRG DVA M+KEG+MSED+FIEEAKVM L H
Sbjct: 3 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSH 62
Query: 482 QNLVQLYGVCSKHRPIYIVTD 502
+ LVQLYGVC+K RPI+I+T+
Sbjct: 63 EKLVQLYGVCTKQRPIFIITE 83
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+VL Y++FSSKSD+WA+GVLMWE+++ GKMPY R N+E + + +G+ L +P
Sbjct: 175 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP 227
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G LLNYLR + LL+MC VC+ M YLE ++HR+
Sbjct: 85 MANGCLLNYLREMRHRF--QTQQLLEMCKDVCEAMEYLESKQFLHRD 129
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQH 481
WEIDP +L L+ELG+GQFGVV+ GKWRG DVA M+KEG+MSED+FIEEAKVM L H
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSH 63
Query: 482 QNLVQLYGVCSKHRPIYIVTD 502
+ LVQLYGVC+K RPI+I+T+
Sbjct: 64 EKLVQLYGVCTKQRPIFIITE 84
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+VL Y++FSSKSD+WA+GVLMWE+++ GKMPY R N+E + + +G+ L +P
Sbjct: 176 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP 228
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G LLNYLR + LL+MC VC+ M YLE ++HR+
Sbjct: 86 MANGCLLNYLREMRHRF--QTQQLLEMCKDVCEAMEYLESKQFLHRD 130
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 108/180 (60%), Gaps = 7/180 (3%)
Query: 331 VKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIP 387
++ G F+VR S +TKG Y LS+ + +VKHY I++ G F+++ + +S+
Sbjct: 84 AENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQ 143
Query: 388 EVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRR 447
++V Y+ ++ GL RL T+ C P T GL+ D WEI L L +LG G FG V
Sbjct: 144 QLVAYYSKHADGLCHRL-TTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWM 202
Query: 448 GKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
G W G+ VA+ +K GTMS + F++EA+VM +L+H+ LVQLY V S+ PIYIV + S
Sbjct: 203 GTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVGEYMS 261
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
Y RF+ KSDVW++G+L+ E+ T G++PY + N EV+D+V+RG + P
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 403
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
VALY +++ DLS +KG +++++T+ WW G GYIPSNYV
Sbjct: 4 TFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYV 56
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
M GSLL++L+ E + L+DM Q+ GMAY+ER NY+HR+ + +
Sbjct: 260 MSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 309
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW 108
VALY +++ DLS +KG +++++T+ WW
Sbjct: 4 TFVALYDYESRTETDLSFKKGERLQIVNNTEGDWW 38
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 107/179 (59%), Gaps = 7/179 (3%)
Query: 332 KDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
++ G F+VR S +TKG Y LS+ + +VKHY I++ G F+++ + S+ +
Sbjct: 86 ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQQ 145
Query: 389 VVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRG 448
+V Y+ ++ GL RL T+ C P T GL+ D WEI L L +LG G FG V G
Sbjct: 146 LVAYYSKHADGLCHRL-TNVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG 204
Query: 449 KWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
W G+ VA+ +K G MS + F++EA+VM +L+H+ LVQLY V S+ PIYIVT+ S
Sbjct: 205 TWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMS 262
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
Y RF+ KSDVW++G+L+ E+ T G++PY + N EV+D+V+RG + P
Sbjct: 356 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 404
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
VALY +++ DLS +KG +++++T+ WW G GYIPSNYV
Sbjct: 5 TFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLTTGQTGYIPSNYV 57
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 5/53 (9%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHRETKKS 51
M GSLL++L+ +G + L L+DM Q+ GMAY+ER NY+HR+ + +
Sbjct: 261 MSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 310
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW 108
VALY +++ DLS +KG +++++T+ WW
Sbjct: 5 TFVALYDYESRTETDLSFKKGERLQIVNNTEGDWW 39
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQHQN 483
IDP +L L+ELG+GQFGVV+ GKWRG DVA M+KEG+MSED+FIEEAKVM L H+
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEK 60
Query: 484 LVQLYGVCSKHRPIYIVTD 502
LVQLYGVC+K RPI+I+T+
Sbjct: 61 LVQLYGVCTKQRPIFIITE 79
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+VL Y++FSSKSD+WA+GVLMWE+++ GKMPY R N+E + + +G+ L +P
Sbjct: 171 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP 223
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G LLNYLR + LL+MC VC+ M YLE ++HR+
Sbjct: 81 MANGCLLNYLREMRHRF--QTQQLLEMCKDVCEAMEYLESKQFLHRD 125
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 103/177 (58%), Gaps = 9/177 (5%)
Query: 336 GCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHR 394
G F+VR S S+ G ++SL + V HY I S G+ ++S + +++ E+V++H
Sbjct: 124 GSFLVRESESSPGQRSISLRYE---GRVYHYRINTASDGKLYVSSESRFNTLAELVHHHS 180
Query: 395 HNSGGLASRLKTSPCDRPVPATAGLS--HDKWEIDPAELMLLEELGSGQFGVVRRGKWRG 452
+ GL + L R P G+S +DKWE++ ++ + +LG GQ+G V G W+
Sbjct: 181 TVADGLITTLHYPAPKRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK 240
Query: 453 ---SIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
++ V +KE TM ++F++EA VM ++H NLVQL GVC++ P YI+T+ ++
Sbjct: 241 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY 297
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
+ L Y +FS KSDVWA+GVL+WE+ T G PY + ++V + +++ +E+P+
Sbjct: 386 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 440
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
M +G+LL+YLR N N +LL M Q+ M YLE+ N+IHR
Sbjct: 295 MTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 339
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVKDKNGSVGYIPSNYV 178
P + VALY F A LS+ KG + V+ + W + + KNG G++PSNY+
Sbjct: 40 PNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQ-GWVPSNYI 93
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 103/177 (58%), Gaps = 9/177 (5%)
Query: 336 GCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHR 394
G F+VR S S+ G ++SL + V HY I S G+ ++S + +++ E+V++H
Sbjct: 127 GSFLVRESESSPGQRSISLRYE---GRVYHYRINTASDGKLYVSSESRFNTLAELVHHHS 183
Query: 395 HNSGGLASRLKTSPCDRPVPATAGLS--HDKWEIDPAELMLLEELGSGQFGVVRRGKWRG 452
+ GL + L R P G+S +DKWE++ ++ + +LG GQ+G V G W+
Sbjct: 184 TVADGLITTLHYPAPKRNKPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK 243
Query: 453 ---SIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
++ V +KE TM ++F++EA VM ++H NLVQL GVC++ P YI+T+ ++
Sbjct: 244 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY 300
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
+ L Y +FS KSDVWA+GVL+WE+ T G PY + ++V + +++ +E+P+
Sbjct: 389 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 443
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
M +G+LL+YLR N + +LL M Q+ M YLE+ N+IHR
Sbjct: 298 MTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 342
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVKDKNGSVGYIPSNYV 178
P + VALY F A LS+ KG + V+ + W + + KNG G++PSNY+
Sbjct: 43 PNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQ-GWVPSNYI 96
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 103/177 (58%), Gaps = 9/177 (5%)
Query: 336 GCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHR 394
G F+VR S S+ G ++SL + V HY I S G+ ++S + +++ E+V++H
Sbjct: 166 GSFLVRESESSPGQRSISLRYE---GRVYHYRINTASDGKLYVSSESRFNTLAELVHHHS 222
Query: 395 HNSGGLASRLKTSPCDRPVPATAGLS--HDKWEIDPAELMLLEELGSGQFGVVRRGKWRG 452
+ GL + L R P G+S +DKWE++ ++ + +LG GQ+G V G W+
Sbjct: 223 TVADGLITTLHYPAPKRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK 282
Query: 453 ---SIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
++ V +KE TM ++F++EA VM ++H NLVQL GVC++ P YI+T+ ++
Sbjct: 283 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY 339
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
+ L Y +FS KSDVWA+GVL+WE+ T G PY + ++V + +++ +E+P+
Sbjct: 428 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 482
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
M +G+LL+YLR N N +LL M Q+ M YLE+ N+IHR
Sbjct: 337 MTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 381
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVKDKNGSVGYIPSNYV 178
P + VALY F A LS+ KG + V+ + W + + KNG G++PSNY+
Sbjct: 82 PNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQ-GWVPSNYI 135
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 63/83 (75%), Gaps = 2/83 (2%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQHQ 482
E+ E+ LL+ELGSGQFGVV+ GKW+G DVA M+KEG+MSED+F +EA+ M +L H
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHP 63
Query: 483 NLVQLYGVCSKHRPIYIVTDTSS 505
LV+ YGVCSK PIYIVT+ S
Sbjct: 64 KLVKFYGVCSKEYPIYIVTEYIS 86
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+V +Y ++SSKSDVWA+G+LMWEVF+ GKMPY N+EVV +V +G L +P
Sbjct: 175 EVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRP 227
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
+ +G LLNYLR H G LL+MC VC+GMA+LE H +IHR+
Sbjct: 85 ISNGCLLNYLRSHGK--GLEPSQLLEMCYDVCEGMAFLESHQFIHRD 129
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 98/172 (56%), Gaps = 8/172 (4%)
Query: 336 GCFVVRNS-STKGLYTLSLYTKVPHP--HVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
G F++R+S +TKG Y+LS+ P VKHY I+ G F++S + ++ E+V++
Sbjct: 94 GSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDH 153
Query: 393 HRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG 452
++ + GL +L + PC P D WEI L L ++LG+GQFG V +
Sbjct: 154 YKKGNDGLCQKL-SVPCMSSKPQKP-WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNK 211
Query: 453 SIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
VA+ MK G+MS + F+ EA VM LQH LV+L+ V +K PIYI+T+
Sbjct: 212 HTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE-PIYIITE 262
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 38/54 (70%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
+ +N+ F+ KSDVW++G+L+ E+ T G++PY + N EV+ ++RG + +P+
Sbjct: 355 EAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPE 408
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKEKELLG 185
+VVALY ++AI DLS +KG + V++++ E WWK + GYIPSNYV + L
Sbjct: 10 IVVALYDYEAIHHEDLSFQKGDQMVVLEESGE-WWKARSLATRKEGYIPSNYVARVDSLE 68
Query: 186 LQKY 189
+++
Sbjct: 69 TEEW 72
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
M GSLL++L+ E + + L+D Q+ +GMA++E+ NYIHR+ + +
Sbjct: 264 MAKGSLLDFLKSDEGS-KQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAA 313
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
+VVALY ++AI DLS +KG + V++++ E WWK +
Sbjct: 10 IVVALYDYEAIHHEDLSFQKGDQMVVLEESGE-WWKAR 46
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 98/172 (56%), Gaps = 8/172 (4%)
Query: 336 GCFVVRNS-STKGLYTLSLYTKVPHP--HVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
G F++R+S +TKG Y+LS+ P VKHY I+ G F++S + ++ E+V++
Sbjct: 88 GSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDH 147
Query: 393 HRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG 452
++ + GL +L + PC P D WEI L L ++LG+GQFG V +
Sbjct: 148 YKKGNDGLCQKL-SVPCMSSKPQKP-WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNK 205
Query: 453 SIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
VA+ MK G+MS + F+ EA VM LQH LV+L+ V +K PIYI+T+
Sbjct: 206 HTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE-PIYIITE 256
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 38/54 (70%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
+ +N+ F+ KSDVW++G+L+ E+ T G++PY + N EV+ ++RG + +P+
Sbjct: 339 EAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPE 392
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKEKELLG 185
+VVALY ++AI DLS +KG + V++++ E WWK + GYIPSNYV + L
Sbjct: 4 IVVALYDYEAIHHEDLSFQKGDQMVVLEESGE-WWKARSLATRKEGYIPSNYVARVDSLE 62
Query: 186 LQKY 189
+++
Sbjct: 63 TEEW 66
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
M GSLL++L+ E + + L+D Q+ +GMA++E+ NYIHR+ + +
Sbjct: 258 MAKGSLLDFLKSDEGS-KQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAA 307
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
+VVALY ++AI DLS +KG + V++++ E WWK +
Sbjct: 4 IVVALYDYEAIHHEDLSFQKGDQMVVLEESGE-WWKAR 40
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQ 480
KW IDP+EL ++E+GSGQFG+V G W VA+ ++EG MSE+DFIEEA+VM +L
Sbjct: 2 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS 61
Query: 481 HQNLVQLYGVCSKHRPIYIVTD 502
H LVQLYGVC + PI +VT+
Sbjct: 62 HPKLVQLYGVCLEQAPICLVTE 83
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 42/54 (77%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
+V +++R+SSKSDVW++GVLMWEVF+ GK+PY N+EVV+ + G L KP+
Sbjct: 175 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 228
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M HG L +YLR LL MC+ VC+GMAYLE IHR+
Sbjct: 85 MEHGCLSDYLRTQRGLFAAET--LLGMCLDVCEGMAYLEEACVIHRD 129
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 58/80 (72%), Gaps = 2/80 (2%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQ 480
KW IDP+EL ++E+GSGQFG+V G W VA+ ++EG MSE+DFIEEA+VM +L
Sbjct: 4 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS 63
Query: 481 HQNLVQLYGVCSKHRPIYIV 500
H LVQLYGVC + PI +V
Sbjct: 64 HPKLVQLYGVCLEQAPICLV 83
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 42/54 (77%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
+V +++R+SSKSDVW++GVLMWEVF+ GK+PY N+EVV+ + G L KP+
Sbjct: 177 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 230
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M HG L +YLR LL MC+ VC+GMAYLE IHR+
Sbjct: 87 MEHGCLSDYLRTQRGLFAAET--LLGMCLDVCEGMAYLEEACVIHRD 131
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQN 483
IDP+EL ++E+GSGQFG+V G W VA+ +KEG+MSEDDFIEEA+VM +L H
Sbjct: 24 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPK 83
Query: 484 LVQLYGVCSKHRPIYIV 500
LVQLYGVC + PI +V
Sbjct: 84 LVQLYGVCLEQAPICLV 100
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 42/54 (77%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
+V +++R+SSKSDVW++GVLMWEVF+ GK+PY N+EVV+ + G L KP+
Sbjct: 194 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 247
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M HG L +YLR LL MC+ VC+GMAYLE IHR+
Sbjct: 104 MEHGCLSDYLRTQRGLFAAET--LLGMCLDVCEGMAYLEEACVIHRD 148
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQN 483
IDP+EL ++E+GSGQFG+V G W VA+ ++EG MSE+DFIEEA+VM +L H
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPK 63
Query: 484 LVQLYGVCSKHRPIYIV 500
LVQLYGVC + PI +V
Sbjct: 64 LVQLYGVCLEQAPICLV 80
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 42/54 (77%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
+V +++R+SSKSDVW++GVLMWEVF+ GK+PY N+EVV+ + G L KP+
Sbjct: 174 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 227
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M HG L +YLR LL MC+ VC+GMAYLE + IHR+
Sbjct: 84 MEHGCLSDYLRTQRGLFAAET--LLGMCLDVCEGMAYLEEASVIHRD 128
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQN 483
IDP+EL ++E+GSGQFG+V G W VA+ ++EG MSE+DFIEEA+VM +L H
Sbjct: 2 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPK 61
Query: 484 LVQLYGVCSKHRPIYIV 500
LVQLYGVC + PI +V
Sbjct: 62 LVQLYGVCLEQAPICLV 78
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 42/54 (77%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
+V +++R+SSKSDVW++GVLMWEVF+ GK+PY N+EVV+ + G L KP+
Sbjct: 172 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 225
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M HG L +YLR LL MC+ VC+GMAYLE IHR+
Sbjct: 82 MEHGCLSDYLRTQRGLFAAET--LLGMCLDVCEGMAYLEEACVIHRD 126
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQN 483
IDP+EL ++E+GSGQFG+V G W VA+ ++EG MSE+DFIEEA+VM +L H
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPK 63
Query: 484 LVQLYGVCSKHRPIYIV 500
LVQLYGVC + PI +V
Sbjct: 64 LVQLYGVCLEQAPICLV 80
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 42/54 (77%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
+V +++R+SSKSDVW++GVLMWEVF+ GK+PY N+EVV+ + G L KP+
Sbjct: 174 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 227
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M HG L +YLR LL MC+ VC+GMAYLE IHR+
Sbjct: 84 MEHGCLSDYLRTQRGLFAAET--LLGMCLDVCEGMAYLEEACVIHRD 128
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRL 479
D WEI L L++ LG+GQFG V G W G+ VA+ +K GTMS + F+EEA++M +L
Sbjct: 2 DVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKL 61
Query: 480 QHQNLVQLYGVCSKHRPIYIVTD 502
+H LVQLY V S+ PIYIVT+
Sbjct: 62 KHDKLVQLYAVVSEE-PIYIVTE 83
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 37/50 (74%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
Y RF+ KSDVW++G+L+ E+ T G++PY + N EV+++V+RG + P+
Sbjct: 180 YGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQ 229
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
M GSLL++L+ E + L+DM QV GMAY+ER NYIHR+ + +
Sbjct: 85 MNKGSLLDFLKDGEGR-ALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSA 134
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 416 TAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEA 473
T GL+ D WEI L L +LG G FG V G W G+ VA+ +K GTMS + F++EA
Sbjct: 5 TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEA 64
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
+VM +L+H+ LVQLY V S+ PIYIVT+ S
Sbjct: 65 QVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMS 95
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
Y RF+ KSDVW++G+L+ E+ T G++PY + N EV+D+V+RG + P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 237
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHRETKKS 51
M G LL++L+ +G + L L+DM Q+ GMAY+ER NY+HR+ + +
Sbjct: 94 MSKGCLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 416 TAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEA 473
T GL+ D WEI L L +LG G FG V G W G+ VA+ +K GTMS + F++EA
Sbjct: 5 TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEA 64
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
+VM +L+H+ LVQLY V S+ PIYIVT+ S
Sbjct: 65 QVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMS 95
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
Y RF+ KSDVW++G+L+ E+ T G++PY + N EV+D+V+RG + P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 237
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 5/53 (9%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHRETKKS 51
M GSLL++L+ +G + L L+DM Q+ GMAY+ER NY+HR+ + +
Sbjct: 94 MSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 416 TAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEA 473
T GL+ D WEI L L +LG G FG V G W G+ VA+ +K GTMS + F++EA
Sbjct: 5 TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEA 64
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
+VM +L+H+ LVQLY V S+ PIYIVT+ S
Sbjct: 65 QVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMS 95
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
Y RF+ KSDVW++G+L+ E+ T G++PY + N EV+D+V+RG + P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 237
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 5/49 (10%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHRE 47
M GSLL++L+ +G + L L+DM Q+ GMAY+ER NY+HR+
Sbjct: 94 MSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 416 TAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEA 473
T GL+ D WEI L L +LG G FG V G W G+ VA+ +K GTMS + F++EA
Sbjct: 2 TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEA 61
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
+VM +L+H+ LVQLY V S+ PIYIVT+
Sbjct: 62 QVMKKLRHEKLVQLYAVVSEE-PIYIVTE 89
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
Y RF+ KSDVW++G+L+ E+ T G++PY + N EV+D+V+RG + P
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 234
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
M GSLL++L+ E + L+DM Q+ GMAY+ER NY+HR+ + +
Sbjct: 91 MNKGSLLDFLK-GETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAA 140
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 416 TAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEA 473
T GL+ D WEI L L +LG G FG V G W G+ VA+ +K GTMS + F++EA
Sbjct: 2 TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEA 61
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
+VM +L+H+ LVQLY V S+ PIYIVT+
Sbjct: 62 QVMKKLRHEKLVQLYAVVSEE-PIYIVTE 89
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
Y RF+ KSDVW++G+L+ E+ T G++PY + N EV+D+V+RG + P
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 234
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
M GSLL++L+ E + L+DM Q+ GMAY+ER NY+HR+ + +
Sbjct: 91 MNKGSLLDFLK-GETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAA 140
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 416 TAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEA 473
T GL+ D WEI L L +LG G FG V G W G+ VA+ +K GTMS + F++EA
Sbjct: 5 TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEA 64
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
+VM +++H+ LVQLY V S+ PIYIVT+ S
Sbjct: 65 QVMKKIRHEKLVQLYAVVSEE-PIYIVTEYMS 95
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
Y RF+ KSDVW++G+L+ E+ T G++PY + N EV+D+V+RG + P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 237
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 5/53 (9%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHRETKKS 51
M GSLL++L+ +G + L L+DM Q+ GMAY+ER NY+HR+ + +
Sbjct: 94 MSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 419 LSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKV 475
+S DKWE++ ++ + +LG GQFG V G W+ ++ V +KE TM ++F++EA V
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 60
Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
M ++H NLVQL GVC++ P YI+T+ ++
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTY 91
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
+ L Y +FS KSDVWA+GVL+WE+ T G PY + ++V + +++ +E+P+
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEG 234
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G+LL+YLR N + +LL M Q+ M YLE+ N+IHR+
Sbjct: 89 MTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 134
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 416 TAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEA 473
T GL+ D WEI L L +LG G FG V G W G+ VA+ +K GTMS + F++EA
Sbjct: 5 TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEA 64
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
+VM +L+H+ LVQLY V S+ PIYIV + S
Sbjct: 65 QVMKKLRHEKLVQLYAVVSEE-PIYIVIEYMS 95
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
Y RF+ KSDVW++G+L+ E+ T G++PY + N EV+D+V+RG + P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 237
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 5/53 (9%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHRETKKS 51
M GSLL++L+ +G + L L+DM Q+ GMAY+ER NY+HR+ + +
Sbjct: 94 MSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 416 TAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEA 473
T GL+ D WEI L L +LG G FG V G W G+ VA+ +K GTMS + F++EA
Sbjct: 5 TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEA 64
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
+VM +L+H+ LVQLY V S+ PIYIV + S
Sbjct: 65 QVMKKLRHEKLVQLYAVVSEE-PIYIVCEYMS 95
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
Y RF+ KSDVW++G+L+ E+ T G++PY + N EV+D+V+RG + P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 237
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 5/53 (9%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHRETKKS 51
M GSLL++L+ +G + L L+DM Q+ GMAY+ER NY+HR+ + +
Sbjct: 94 MSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 416 TAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEA 473
T GL+ D WEI L L +LG G FG V G W G+ VA+ +K GTMS + F++EA
Sbjct: 5 TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEA 64
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
+VM +L+H+ LVQLY V S+ PIYIV + S
Sbjct: 65 QVMKKLRHEKLVQLYAVVSEE-PIYIVIEYMS 95
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
Y RF+ KSDVW++G+L+ E+ T G++PY + N EV+D+V+RG + P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 237
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 5/53 (9%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHRETKKS 51
M GSLL++L+ +G + L L+DM Q+ GMAY+ER NY+HR+ + +
Sbjct: 94 MSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
>pdb|2EKX|A Chain A, Solution Structure Of The Human Bmx Sh2 Domain
Length = 110
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 56/77 (72%), Gaps = 3/77 (3%)
Query: 332 KDKEGCFVVRNSSTKGLYTLSLYTKVPHPH---VKHYHIKQNSRGEFFLSEKHCCHSIPE 388
K KEG F+VRNSS G+YT+SL++K + VKHYH+ N+ + +L+E +C SIP+
Sbjct: 30 KGKEGAFMVRNSSQVGMYTVSLFSKAVNDKKGTVKHYHVHTNAENKLYLAENYCFDSIPK 89
Query: 389 VVNYHRHNSGGLASRLK 405
+++YH+HNS G+ +RL+
Sbjct: 90 LIHYHQHNSAGMITRLR 106
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPH---VKHYHIKQNS 313
W+ G++SR ++E +L+Q+ KEG F+VRNSS G+YT+SL++K + VKHYH+ N+
Sbjct: 13 WFAGNISRSQSEQLLRQKGKEGAFMVRNSSQVGMYTVSLFSKAVNDKKGTVKHYHVHTNA 72
Query: 314 RGEFFLSEKHCCHSIPEV 331
+ +L+E +C SIP++
Sbjct: 73 ENKLYLAENYCFDSIPKL 90
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 416 TAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEA 473
T GL+ D WEI L L +LG G FG V G W G+ VA+ +K GTMS + F++EA
Sbjct: 5 TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEA 64
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
+VM +L+H+ LVQLY V S+ PIYIV + S
Sbjct: 65 QVMKKLRHEKLVQLYAVVSEE-PIYIVMEYMS 95
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
Y RF+ KSDVW++G+L+ E+ T G++PY + N EV+D+V+RG + P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 237
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHRETKKS 51
M G LL++L+ +G + L L+DM Q+ GMAY+ER NY+HR+ + +
Sbjct: 94 MSKGCLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
++DKWE++ ++ + +LG GQ+G V G W+ ++ V +KE TM ++F++EA VM
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
++H NLVQL GVC++ P YI+T+ ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTY 93
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
+ L Y +FS KSDVWA+GVL+WE+ T G PY + ++V + +++ +E+P+
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 236
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G+LL+YLR N N +LL M Q+ M YLE+ N+IHR+
Sbjct: 91 MTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 136
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 419 LSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKV 475
+S DKWE++ ++ + +LG GQ+G V G W+ ++ V +KE TM ++F++EA V
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 60
Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
M ++H NLVQL GVC++ P YI+T+ ++
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTY 91
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
+ L Y +FS KSDVWA+GVL+WE+ T G PY + ++V + +++ +E+P+
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEG 234
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G+LL+YLR N + +LL M Q+ M YLE+ N+IHR+
Sbjct: 89 MTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 134
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
++DKWE++ ++ + +LG GQ+G V G W+ ++ V +KE TM ++F++EA VM
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
++H NLVQL GVC++ P YI+T+ ++
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTY 98
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
+ L Y +FS KSDVWA+GVL+WE+ T G PY + ++V + +++ +E+P+
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 241
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G+LL+YLR N N +LL M Q+ M YLE+ N+IHR+
Sbjct: 96 MTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
++DKWE++ ++ + +LG GQ+G V G W+ ++ V +KE TM ++F++EA VM
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 76
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
++H NLVQL GVC++ P YI+T+ ++
Sbjct: 77 KEIKHPNLVQLLGVCTREPPFYIITEFMTY 106
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
+ L Y +FS KSDVWA+GVL+WE+ T G PY + ++V + +++ +E+P+
Sbjct: 195 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 249
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G+LL+YLR N N +LL M Q+ M YLE+ N+IHR+
Sbjct: 104 MTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 149
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
++DKWE++ ++ + +LG GQ+G V G W+ ++ V +KE TM ++F++EA VM
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
++H NLVQL GVC++ P YI+T+ ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTY 93
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 36/53 (67%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
L Y +FS KSDVWA+GVL+WE+ T G PY + ++V + +++ +E+P+
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 236
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G+LL+YLR N N +LL M Q+ M YLE+ N+IHR+
Sbjct: 91 MTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 136
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
++DKWE++ ++ + +LG GQ+G V G W+ ++ V +KE TM ++F++EA VM
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
++H NLVQL GVC++ P YI+T+ ++
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTY 98
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
+ L Y +FS KSDVWA+GVL+WE+ T G PY + ++V + +++ +E+P+
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 241
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G+LL+YLR N N +LL M Q+ M YLE+ N+IHR+
Sbjct: 96 MTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
++DKWE++ ++ + +LG GQ+G V G W+ ++ V +KE TM ++F++EA VM
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 67
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
++H NLVQL GVC++ P YI+T+ ++
Sbjct: 68 KEIKHPNLVQLLGVCTREPPFYIITEFMTY 97
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
+ L Y +FS KSDVWA+GVL+WE+ T G PY + ++V + +++ +E+P+
Sbjct: 186 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 240
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G+LL+YLR N N +LL M Q+ M YLE+ N+IHR+
Sbjct: 95 MTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 140
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
++DKWE++ ++ + +LG GQ+G V G W+ ++ V +KE TM ++F++EA VM
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
++H NLVQL GVC++ P YI+T+ ++
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTY 95
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
+ L Y +FS KSDVWA+GVL+WE+ T G PY + ++V + +++ +E+P+
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 238
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G+LL+YLR N N +LL M Q+ M YLE+ N+IHR+
Sbjct: 93 MTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
++DKWE++ ++ + +LG GQ+G V G W+ ++ V +KE TM ++F++EA VM
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
++H NLVQL GVC++ P YI+T+ ++
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTY 95
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
+ L Y +FS KSDVWA+GVL+WE+ T G PY + ++V + +++ +E+P+
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 238
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G+LL+YLR N N +LL M Q+ M YLE+ N+IHR+
Sbjct: 93 MTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
++DKWE++ ++ + +LG GQ+G V G W+ ++ V +KE TM ++F++EA VM
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
++H NLVQL GVC++ P YI+T+ ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTY 93
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
+ L Y +FS KSDVWA+GVL+WE+ T G PY + ++V + +++ +E+P+
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 236
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G+LL+YLR N + +LL M Q+ M YLE+ N+IHR+
Sbjct: 91 MTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
++DKWE++ ++ + +LG GQ+G V G W+ ++ V +KE TM ++F++EA VM
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
++H NLVQL GVC++ P YI+T+ ++
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTY 98
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
+ L Y +FS KSDVWA+GVL+WE+ T G PY + ++V + +++ +E+P+
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 241
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G+LL+YLR N + +LL M Q+ M YLE+ N+IHR+
Sbjct: 96 MTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 141
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
++DKWE++ ++ + +LG GQ+G V G W+ ++ V +KE TM ++F++EA VM
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 64
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
++H NLVQL GVC++ P YI+T+ ++
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIITEFMTY 94
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
+ L Y +FS KSDVWA+GVL+WE+ T G PY + ++V + +++ +E+P+
Sbjct: 183 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 237
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G+LL+YLR N N +LL M Q+ M YLE+ N+IHR+
Sbjct: 92 MTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 137
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
++DKWE++ ++ + +LG GQ+G V G W+ ++ V +KE TM ++F++EA VM
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
++H NLVQL GVC++ P YI+T+ ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTY 93
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
+ L Y +FS KSDVWA+GVL+WE+ T G PY + ++V + +++ +E+P+
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 236
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G+LL+YLR N + +LL M Q+ M YLE+ N+IHR+
Sbjct: 91 MTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
++DKWE++ ++ + +LG GQ+G V G W+ ++ V +KE TM ++F++EA VM
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
++H NLVQL GVC++ P YI+T+ ++
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTY 98
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
+ L Y +FS KSDVWA+GVL+WE+ T G PY + ++V + +++ +E+P+
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 241
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G+LL+YLR N N +LL M Q+ M YLE+ N+IHR+
Sbjct: 96 MTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
++DKWE++ ++ + +LG GQ+G V G W+ ++ V +KE TM ++F++EA VM
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
++H NLVQL GVC++ P YI+T+ ++
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTY 95
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
+ L Y +FS KSDVWA+GVL+WE+ T G PY + ++V + +++ +E+P+
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 238
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G+LL+YLR N N +LL M Q+ M YLE+ N+IHR+
Sbjct: 93 MTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 419 LSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVM 476
L+ D WEI L L +LG G FG V G W G+ VA+ +K GTMS + F++EA+VM
Sbjct: 1 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVM 60
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
+L+H+ LVQLY V S+ PIYIVT+ S
Sbjct: 61 KKLRHEKLVQLYAVVSEE-PIYIVTEYMS 88
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
Y RF+ KSDVW++G+L+ E+ T G++PY + N EV+D+V+RG + P
Sbjct: 182 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 230
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
M GSLL++L+ E + L+DM Q+ GMAY+ER NY+HR+ + +
Sbjct: 87 MSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 136
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTR 478
D+WE+ L L+E LG+GQFG V G + G VA+ +K+G+MS D F+ EA +M +
Sbjct: 10 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 69
Query: 479 LQHQNLVQLYGVCSKHRPIYIVTD 502
LQHQ LV+LY V ++ PIYI+T+
Sbjct: 70 LQHQRLVRLYAVVTQE-PIYIITE 92
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ +NY F+ KSDVW++G+L+ E+ T G++PY + N EV+ ++RG + +P
Sbjct: 185 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 237
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
M +GSL+++L+ + + LLDM Q+ +GMA++E NYIHR+ + +
Sbjct: 94 MENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 143
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTR 478
D+WE+ L L+E LG+GQFG V G + G VA+ +K+G+MS D F+ EA +M +
Sbjct: 11 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 70
Query: 479 LQHQNLVQLYGVCSKHRPIYIVTD 502
LQHQ LV+LY V ++ PIYI+T+
Sbjct: 71 LQHQRLVRLYAVVTQE-PIYIITE 93
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ +NY F+ KSDVW++G+L+ E+ T G++PY + N EV+ ++RG + +P
Sbjct: 186 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 238
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
M +GSL+++L+ + + + LLDM Q+ +GMA++E NYIHR+ + +
Sbjct: 95 MENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 144
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTR 478
D+WE+ L L+E LG+GQFG V G + G VA+ +K+G+MS D F+ EA +M +
Sbjct: 11 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 70
Query: 479 LQHQNLVQLYGVCSKHRPIYIVTD 502
LQHQ LV+LY V ++ PIYI+T+
Sbjct: 71 LQHQRLVRLYAVVTQE-PIYIITE 93
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ +NY F+ KSDVW++G+L+ E+ T G++PY + N EV+ ++RG + +P
Sbjct: 186 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 238
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
M +GSL+++L+ + + LLDM Q+ +GMA++E NYIHR+ + +
Sbjct: 95 MENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 144
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTR 478
D+WE+ L L+E LG+GQFG V G + G VA+ +K+G+MS D F+ EA +M +
Sbjct: 15 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 74
Query: 479 LQHQNLVQLYGVCSKHRPIYIVTD 502
LQHQ LV+LY V ++ PIYI+T+
Sbjct: 75 LQHQRLVRLYAVVTQE-PIYIITE 97
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ +NY F+ KSDVW++G+L+ E+ T G++PY + N EV+ ++RG + +P
Sbjct: 190 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 242
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
M +GSL+++L+ + + + LLDM Q+ +GMA++E NYIHR+ + +
Sbjct: 99 MENGSLVDFLKT-PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 148
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTR 478
D+WE+ L L+E LG+GQFG V G + G VA+ +K+G+MS D F+ EA +M +
Sbjct: 13 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 72
Query: 479 LQHQNLVQLYGVCSKHRPIYIVTD 502
LQHQ LV+LY V ++ PIYI+T+
Sbjct: 73 LQHQRLVRLYAVVTQE-PIYIITE 95
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ +NY F+ KSDVW++G+L+ E+ T G++PY + N EV+ ++RG + +P
Sbjct: 188 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 240
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
M +GSL+++L+ + + LLDM Q+ +GMA++E NYIHR+ + +
Sbjct: 97 MENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 146
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTR 478
D+WE+ L L+E LG+GQFG V G + G VA+ +K+G+MS D F+ EA +M +
Sbjct: 5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 64
Query: 479 LQHQNLVQLYGVCSKHRPIYIVTD 502
LQHQ LV+LY V ++ PIYI+T+
Sbjct: 65 LQHQRLVRLYAVVTQE-PIYIITE 87
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ +NY F+ KSDVW++G+L+ E+ T G++PY + N EV+ ++RG + +P
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 232
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
M +GSL+++L+ + + + LLDM Q+ +GMA++E NYIHR+ + +
Sbjct: 89 MENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 138
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTR 478
D+WE+ L L+E LG+GQFG V G + G VA+ +K+G+MS D F+ EA +M +
Sbjct: 5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 64
Query: 479 LQHQNLVQLYGVCSKHRPIYIVTD 502
LQHQ LV+LY V ++ PIYI+T+
Sbjct: 65 LQHQRLVRLYAVVTQE-PIYIITE 87
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ +NY F+ KSDVW++G+L+ E+ T G++PY + N EV+ ++RG + +P
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 232
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
M +GSL+++L+ + + + LLDM Q+ +GMA++E NYIHR+ + +
Sbjct: 89 MENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 138
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
++DKWE++ ++ + +LG GQ+G V G W+ ++ V +KE TM ++F++EA VM
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
++H NLVQL GVC++ P YI+ + ++
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIIIEFMTY 98
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
+ L Y +FS KSDVWA+GVL+WE+ T G PY + ++V + +++ +E+P+
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 241
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G+LL+YLR N N +LL M Q+ M YLE+ N+IHR+
Sbjct: 96 MTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRL 479
D+WE+ L L+E LG+GQFG V G + G VA+ +K+G+MS D F+ EA +M +L
Sbjct: 1 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 60
Query: 480 QHQNLVQLYGVCSKHRPIYIVTD 502
QHQ LV+LY V ++ PIYI+T+
Sbjct: 61 QHQRLVRLYAVVTQE-PIYIITE 82
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ +NY F+ KSDVW++G+L+ E+ T G++PY + N EV+ ++RG + +P
Sbjct: 175 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 227
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
M +GSL+++L+ + + + LLDM Q+ +GMA++E NYIHR+ + +
Sbjct: 84 MENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 133
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTR 478
D+WE+ L L+E LG+GQFG V G + G VA+ +K+G+MS D F+ EA +M +
Sbjct: 14 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 73
Query: 479 LQHQNLVQLYGVCSKHRPIYIVTD 502
LQHQ LV+LY V ++ PIYI+T+
Sbjct: 74 LQHQRLVRLYAVVTQE-PIYIITE 96
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ +NY F+ KSDVW++G+L+ E+ T G++PY + N EV+ ++RG + +P
Sbjct: 189 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 241
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
M +GSL+++L+ + + + LLDM Q+ +GMA++E NYIHR+ + +
Sbjct: 98 MENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 147
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTR 478
D+WE+ L L+E LG+GQFG V G + G VA+ +K+G+MS D F+ EA +M +
Sbjct: 7 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 66
Query: 479 LQHQNLVQLYGVCSKHRPIYIVTD 502
LQHQ LV+LY V ++ PIYI+T+
Sbjct: 67 LQHQRLVRLYAVVTQE-PIYIITE 89
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ +NY F+ KSDVW++G+L+ E+ T G++PY + N EV+ ++RG + +P
Sbjct: 182 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 234
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
M +GSL+++L+ + + + LLDM Q+ +GMA++E NYIHR+ + +
Sbjct: 91 MENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 140
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTR 478
D+WE+ L L+E LG+GQFG V G + G VA+ +K+G+MS D F+ EA +M +
Sbjct: 5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 64
Query: 479 LQHQNLVQLYGVCSKHRPIYIVTD 502
LQHQ LV+LY V ++ PIYI+T+
Sbjct: 65 LQHQRLVRLYAVVTQE-PIYIITE 87
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ +NY F+ KSDVW++G+L+ E+ T G++PY + N EV+ ++RG + +P
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 232
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
M +GSL+++L+ + + + LLDM Q+ +GMA++E NYIHR+ + +
Sbjct: 89 MENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 138
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
++DKWE++ ++ + +LG GQ+G V G W+ ++ V +KE TM ++F++EA VM
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
++H NLVQL GVC++ P YI+ + ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTY 93
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
+ L Y +FS KSDVWA+GVL+WE+ T G PY + ++V + +++ +E+P+
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 236
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G+LL+YLR N + +LL M Q+ M YLE+ N+IHR+
Sbjct: 91 MTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
++DKWE++ ++ + +LG GQ+G V G W+ ++ V +KE TM ++F++EA VM
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 64
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
++H NLVQL GVC++ P YI+ + ++
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIIIEFMTY 94
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
+ L Y +FS KSDVWA+GVL+WE+ T G PY + ++V + +++ +E+P+
Sbjct: 183 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 237
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G+LL+YLR N N +LL M Q+ M YLE+ N+IHR+
Sbjct: 92 MTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 137
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
++DKWE++ ++ + +LG GQ+G V G W+ ++ V +KE TM ++F++EA VM
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
++H NLVQL GVC++ P YI+ + ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTY 93
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
+ L Y +FS KSDVWA+GVL+WE+ T G PY + ++V + +++ +E+P+
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 236
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G+LL+YLR N + +LL M Q+ M YLE+ N+IHR+
Sbjct: 91 MTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTR 478
D+WE+ L L+E LG+GQFG V G + G VA+ +K+G+MS D F+ EA +M +
Sbjct: 6 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 65
Query: 479 LQHQNLVQLYGVCSKHRPIYIVTD 502
LQHQ LV+LY V ++ PIYI+T+
Sbjct: 66 LQHQRLVRLYAVVTQE-PIYIITE 88
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ +NY F+ KSDVW++G+L+ E+ T G++PY + N EV+ ++RG + +P
Sbjct: 181 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 233
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
M +GSL+++L+ + + + LLDM Q+ +GMA++E NYIHR+ + +
Sbjct: 90 MENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 139
>pdb|2GE9|A Chain A, Solution Structures Of The Sh2 Domain Of Bruton's Tyrosine
Kinase
Length = 125
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 5/88 (5%)
Query: 334 KEGCFVVRNSSTKGLYTLSLYTKV---PHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVV 390
KEG F+VR+SS G YT+S++ K P ++HY + + +++L+EKH +IPE++
Sbjct: 32 KEGGFIVRDSSKAGKYTVSVFAKSTGDPQGVIRHYVVCSTPQSQYYLAEKHLFSTIPELI 91
Query: 391 NYHRHNSGGLASRLK--TSPCDRPVPAT 416
NYH+HNS GL SRLK S ++ P+T
Sbjct: 92 NYHQHNSAGLISRLKYPVSQQNKNAPST 119
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKV---PHPHVKHYHIKQNS 313
WY M+R +AE +LKQE KEG F+VR+SS G YT+S++ K P ++HY +
Sbjct: 13 WYSKHMTRSQAEQLLKQEGKEGGFIVRDSSKAGKYTVSVFAKSTGDPQGVIRHYVVCSTP 72
Query: 314 RGEFFLSEKHCCHSIPEV 331
+ +++L+EKH +IPE+
Sbjct: 73 QSQYYLAEKHLFSTIPEL 90
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
S DKWE++ ++ + +LG GQ+G V G W+ ++ V +KE TM ++F++EA VM
Sbjct: 23 SMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 82
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
++H NLVQL GVC+ P YIVT+
Sbjct: 83 KEIKHPNLVQLLGVCTLEPPFYIVTE 108
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
+ L Y FS KSDVWA+GVL+WE+ T G PY + ++V D +++G +E+P+
Sbjct: 201 ESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEG 255
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 7/50 (14%)
Query: 1 MRHGSLLNYLR---RHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G+LL+YLR R E T +LL M Q+ M YLE+ N+IHR+
Sbjct: 110 MPYGNLLDYLRECNREEVT----AVVLLYMATQISSAMEYLEKKNFIHRD 155
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRL 479
D WEI L L +LG G FG V G W G+ VA+ +K GTMS + F++EA+VM +L
Sbjct: 2 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL 61
Query: 480 QHQNLVQLYGVCSKHRPIYIVTDTSS 505
+H+ LVQLY V S+ PIYIVT+ S
Sbjct: 62 RHEKLVQLYAVVSEE-PIYIVTEYMS 86
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
Y RF+ KSDVW++G+L+ E+ T G++PY + N EV+D+V+RG + P
Sbjct: 180 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 228
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 5/53 (9%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHRETKKS 51
M GSLL++L+ +G + L L+DM Q+ GMAY+ER NY+HR+ + +
Sbjct: 85 MSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 134
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
S DKWE++ ++ + +LG GQ+G V G W+ ++ V +KE TM ++F++EA VM
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
++H NLVQL GVC++ P YI+ + ++
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIIIEFMTY 91
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
+ L Y +FS KSDVWA+GVL+WE+ T G PY + ++V + +++ +E+P+
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEG 234
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G+LL+YLR N + +LL M Q+ M YLE+ N+IHR+
Sbjct: 89 MTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 134
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRL 479
D WEI + L++ LG+GQFG V G + S VA+ +K GTMS F+EEA +M L
Sbjct: 6 DAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTL 65
Query: 480 QHQNLVQLYGVCSKHRPIYIVTD 502
QH LV+LY V ++ PIYI+T+
Sbjct: 66 QHDKLVRLYAVVTREEPIYIITE 88
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 5/53 (9%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHRETKKS 51
M GSLL++L+ E GG V L L+D Q+ +GMAY+ER NYIHR+ + +
Sbjct: 90 MAKGSLLDFLKSDE---GGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAA 139
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 33/47 (70%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
+ +N+ F+ KSDVW++G+L++E+ T GK+PY N +V+ + +G
Sbjct: 181 EAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQG 227
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Query: 418 GLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKV 475
G WEI + L+++LG+GQFG V G + S VA+ +K GTMS F+EEA +
Sbjct: 1 GAMDPAWEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANL 60
Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTD 502
M LQH LV+LY V +K PIYI+T+
Sbjct: 61 MKTLQHDKLVRLYAVVTKEEPIYIITE 87
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 5/53 (9%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHRETKKS 51
M GSLL++L+ E GG V L L+D Q+ +GMAY+ER NYIHR+ + +
Sbjct: 89 MAKGSLLDFLKSDE---GGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAA 138
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 33/47 (70%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
+ +N+ F+ KS+VW++G+L++E+ T GK+PY N +V+ + +G
Sbjct: 180 EAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQG 226
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 56/82 (68%), Gaps = 3/82 (3%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQ 480
+WE+ L L+E LG+GQFG V G + G VA+ +K+G+MS D F+ EA +M +LQ
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ 62
Query: 481 HQNLVQLYGVCSKHRPIYIVTD 502
HQ LV+LY V ++ PIYI+T+
Sbjct: 63 HQRLVRLYAVVTQE-PIYIITE 83
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ +NY F+ KSDVW++G+L+ E+ T G++PY + N EV+ ++RG + +P
Sbjct: 176 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 228
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
M +GSL+++L+ + + LLDM Q+ +GMA++E NYIHR + +
Sbjct: 85 MENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAA 134
>pdb|3S9K|A Chain A, Crystal Structure Of The Itk Sh2 Domain
Length = 118
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 57/84 (67%), Gaps = 5/84 (5%)
Query: 334 KEGCFVVRNSSTKGLYTLSLYTKV---PHPHVKHYHIKQ--NSRGEFFLSEKHCCHSIPE 388
KEG F+VR+S T G YT+S++TK +P +KHYHIK+ +S ++++EK+ SIP
Sbjct: 30 KEGAFMVRDSRTPGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIPL 89
Query: 389 VVNYHRHNSGGLASRLKTSPCDRP 412
++ YH++N GGL +RL+ C P
Sbjct: 90 LIQYHQYNGGGLVTRLRYPVCGSP 113
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 5/78 (6%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKV---PHPHVKHYHIKQ-- 311
WY +SR +AE +L KEG F+VR+S T G YT+S++TK +P +KHYHIK+
Sbjct: 11 WYNKSISRDKAEKLLLDTGKEGAFMVRDSRTPGTYTVSVFTKAIISENPCIKHYHIKETN 70
Query: 312 NSRGEFFLSEKHCCHSIP 329
+S ++++EK+ SIP
Sbjct: 71 DSPKRYYVAEKYVFDSIP 88
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQH 481
WEI L L +LG G FG V G W G+ VA+ +K GTMS + F++EA+VM +L+H
Sbjct: 2 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH 61
Query: 482 QNLVQLYGVCSKHRPIYIVTDTSS 505
+ LVQLY V S+ PIYIVT+ S
Sbjct: 62 EKLVQLYAVVSEE-PIYIVTEYMS 84
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
Y RF+ KSDVW++G+L+ E+ T G++PY + N EV+D+V+RG + P
Sbjct: 178 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 226
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 5/53 (9%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHRETKKS 51
M GSLL++L+ +G + L L+DM Q+ GMAY+ER NY+HR+ + +
Sbjct: 83 MSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 132
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 7/170 (4%)
Query: 336 GCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHR 394
G F+VR S+ G YTL + + V+HY I ++ + + E+ ++ ++V ++
Sbjct: 102 GLFLVRESTNYPGDYTLCVSCE---GKVEHYRIMYHA-SKLSIDEEVYFENLMQLVEHYT 157
Query: 395 HNSGGLASRL-KTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS 453
++ GL +RL K + V A W ++ EL LL+ +G G+FG V G +RG+
Sbjct: 158 TDADGLCTRLIKPKVMEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGN 217
Query: 454 IDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHR-PIYIVTD 502
+ + F+ EA VMT+L+H NLVQL GV + + +YIVT+
Sbjct: 218 KVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 40/53 (75%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ L +FS+KSDVW++G+L+WE+++ G++PY R+ +VV RV++G ++ P
Sbjct: 356 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP 408
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 1 MRHGSLLNYLR-RHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M GSL++YLR R + LGG+ LL + VC+ M YLE +N++HR+
Sbjct: 269 MAKGSLVDYLRSRGRSVLGGDC--LLKFSLDVCEAMEYLEGNNFVHRD 314
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQE-HWWKVKDKNGSVGYIPSNYVKEKE 182
+A Y F DL KG ++ T++ +W+K K+K G G IP+NYV+++E
Sbjct: 15 IAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKRE 69
Score = 28.5 bits (62), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHI 309
W+ G ++R++AE +L + G F+VR S+ G YTL + + V+HY I
Sbjct: 82 WFHGKITREQAERLLYPPET-GLFLVRESTNYPGDYTLCVSCE---GKVEHYRI 131
>pdb|1LUI|A Chain A, Nmr Structures Of Itk Sh2 Domain, Pro287cis Isoform,
Ensemble Of 20 Low Energy Structures
pdb|1LUK|A Chain A, Nmr Structure Of The Itk Sh2 Domain, Pro287cis, Energy
Minimized Average Structure
pdb|1LUM|A Chain A, Nmr Structure Of The Itk Sh2 Domain, Pro287trans, 20 Low
Energy Structures
pdb|1LUN|A Chain A, Nmr Structure Of The Itk Sh2 Domain, Pro287trans, Energy
Minimized Average Structure
Length = 110
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 56/81 (69%), Gaps = 5/81 (6%)
Query: 334 KEGCFVVRNSSTKGLYTLSLYTKV---PHPHVKHYHIKQ--NSRGEFFLSEKHCCHSIPE 388
KEG F+VR+S T G YT+S++TK +P +KHYHIK+ +S ++++EK+ SIP
Sbjct: 28 KEGAFMVRDSRTPGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIPL 87
Query: 389 VVNYHRHNSGGLASRLKTSPC 409
++ YH++N GGL +RL+ C
Sbjct: 88 LIQYHQYNGGGLVTRLRYPVC 108
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 5/78 (6%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKV---PHPHVKHYHIKQ-- 311
WY +SR +AE +L KEG F+VR+S T G YT+S++TK +P +KHYHIK+
Sbjct: 9 WYNKSISRDKAEKLLLDTGKEGAFMVRDSRTPGTYTVSVFTKAIISENPCIKHYHIKETN 68
Query: 312 NSRGEFFLSEKHCCHSIP 329
+S ++++EK+ SIP
Sbjct: 69 DSPKRYYVAEKYVFDSIP 86
>pdb|2ETZ|A Chain A, The Nmr Minimized Average Structure Of The Itk Sh2 Domain
Bound To A Phosphopeptide
pdb|2EU0|A Chain A, The Nmr Ensemble Structure Of The Itk Sh2 Domain Bound To
A Phosphopeptide
Length = 109
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 56/81 (69%), Gaps = 5/81 (6%)
Query: 334 KEGCFVVRNSSTKGLYTLSLYTKV---PHPHVKHYHIKQ--NSRGEFFLSEKHCCHSIPE 388
KEG F+VR+S T G YT+S++TK +P +KHYHIK+ +S ++++EK+ SIP
Sbjct: 28 KEGAFMVRDSRTPGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIPL 87
Query: 389 VVNYHRHNSGGLASRLKTSPC 409
++ YH++N GGL +RL+ C
Sbjct: 88 LIQYHQYNGGGLVTRLRYPVC 108
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 5/78 (6%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKV---PHPHVKHYHIKQ-- 311
WY +SR +AE +L KEG F+VR+S T G YT+S++TK +P +KHYHIK+
Sbjct: 9 WYNKSISRDKAEKLLLDTGKEGAFMVRDSRTPGTYTVSVFTKAIISENPCIKHYHIKETN 68
Query: 312 NSRGEFFLSEKHCCHSIP 329
+S ++++EK+ SIP
Sbjct: 69 DSPKRYYVAEKYVFDSIP 86
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRL 479
D WEI L L +LG G FG V G W G+ VA+ +K GTMS + F++EA+VM +L
Sbjct: 1 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL 60
Query: 480 QHQNLVQLYGVCSKHRPIYIVTDTSS 505
+H+ LVQLY V S+ PI IVT+ S
Sbjct: 61 RHEKLVQLYAVVSEE-PIXIVTEYMS 85
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
Y RF+ KSDVW++G+L+ E+ T G++PY + N EV+D+V+RG + P
Sbjct: 179 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 227
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
M GSLL++L+ E + L+DM Q+ GMAY+ER NY+HR+ + +
Sbjct: 84 MSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 133
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTR 478
D WE+ L L+E LG+GQ G V G + G VA+ +K+G+MS D F+ EA +M +
Sbjct: 5 EDAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 64
Query: 479 LQHQNLVQLYGVCSKHRPIYIVTD 502
LQHQ LV+LY V ++ PIYI+T+
Sbjct: 65 LQHQRLVRLYAVVTQE-PIYIITE 87
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ +NY F+ KSDVW++G+L+ E+ T G++PY + N EV+ ++RG + +P
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 232
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
M +GSL+++L+ + + + LLDM Q+ +GMA++E NYIHR+ + +
Sbjct: 89 MENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 138
>pdb|2K79|B Chain B, Solution Structure Of The Binary Complex Between The Sh3
And Sh2 Domain Of Interleukin-2 Tyrosine Kinase
pdb|2K7A|B Chain B, Ensemble Structures Of The Binary Complex Between The Sh3
And Sh2 Domain Of Interleukin-2 Tyrosine Kinase
Length = 110
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 56/81 (69%), Gaps = 5/81 (6%)
Query: 334 KEGCFVVRNSSTKGLYTLSLYTKV---PHPHVKHYHIKQ--NSRGEFFLSEKHCCHSIPE 388
KEG F+VR+S T G YT+S++TK +P +KHYHIK+ +S ++++EK+ SIP
Sbjct: 29 KEGAFMVRDSRTPGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIPL 88
Query: 389 VVNYHRHNSGGLASRLKTSPC 409
++ YH++N GGL +RL+ C
Sbjct: 89 LIQYHQYNGGGLVTRLRYPVC 109
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 5/78 (6%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKV---PHPHVKHYHIKQ-- 311
WY +SR +AE +L KEG F+VR+S T G YT+S++TK +P +KHYHIK+
Sbjct: 10 WYNKSISRDKAEKLLLDTGKEGAFMVRDSRTPGTYTVSVFTKAIISENPCIKHYHIKETN 69
Query: 312 NSRGEFFLSEKHCCHSIP 329
+S ++++EK+ SIP
Sbjct: 70 DSPKRYYVAEKYVFDSIP 87
>pdb|1GL5|A Chain A, Nmr Structure Of The Sh3 Domain From The Tec Protein
Tyrosine Kinase
Length = 67
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 45/66 (68%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELL 184
++VVA+Y F+A E DL LE+G EY +++ HWW+ +DK GS GYIPSNYV K+
Sbjct: 2 SEIVVAMYDFQATEAHDLRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGKKSN 61
Query: 185 GLQKYD 190
L +YD
Sbjct: 62 NLDQYD 67
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 72 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
++VVA+Y F+A E DL LE+G EY +++ HWW+ +DK G
Sbjct: 2 SEIVVAMYDFQATEAHDLRLERGQEYIILEKNDLHWWRARDKYG 45
>pdb|2DM0|A Chain A, Solution Structure Of The Sh2 Domain Of Human Tyrosine-
Protein Kinase Txk
Length = 125
Score = 73.2 bits (178), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 53/77 (68%), Gaps = 3/77 (3%)
Query: 332 KDKEGCFVVRNSSTKGLYTLSLYT---KVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
+ KEG F+VR+S G YT+S++ + +KHY IK+N G+++++E+H SIPE
Sbjct: 35 ESKEGAFIVRDSRHLGSYTISVFMGARRSTEAAIKHYQIKKNDSGQWYVAERHAFQSIPE 94
Query: 389 VVNYHRHNSGGLASRLK 405
++ YH+HN+ GL +RL+
Sbjct: 95 LIWYHQHNAAGLMTRLR 111
Score = 72.0 bits (175), Expect = 7e-13, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYT---KVPHPHVKHYHIKQNS 313
WY +++R +AE +L+QE KEG F+VR+S G YT+S++ + +KHY IK+N
Sbjct: 18 WYHRNITRNQAEHLLRQESKEGAFIVRDSRHLGSYTISVFMGARRSTEAAIKHYQIKKND 77
Query: 314 RGEFFLSEKHCCHSIPEV 331
G+++++E+H SIPE+
Sbjct: 78 SGQWYVAERHAFQSIPEL 95
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 19/181 (10%)
Query: 328 IPEVKDKEGCFVVRNSSTKGLYTLS-LYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSI 386
+ E+ G F+VR S K Y LS L+ +P +H+ I+ S + E SI
Sbjct: 25 VAELLVHSGDFLVRESQGKQEYVLSVLWDGLP----RHFIIQ--SLDNLYRLEGEGFPSI 78
Query: 387 PEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVR 446
P ++++ L + R VP DKW ++ +L+L E++G G FG V
Sbjct: 79 PLLIDHLLSTQQPLTKKSGVV-LHRAVP------KDKWVLNHEDLVLGEQIGRGNFGEVF 131
Query: 447 RGKWRGSIDVAMMKEG--TMSED---DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
G+ R + +K T+ D F++EA+++ + H N+V+L GVC++ +PIYIV
Sbjct: 132 SGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191
Query: 502 D 502
+
Sbjct: 192 E 192
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
+ LNY R+SS+SDVW++G+L+WE F+ G PY L N + + V++G L P+
Sbjct: 285 EALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPE 338
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 19/181 (10%)
Query: 328 IPEVKDKEGCFVVRNSSTKGLYTLS-LYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSI 386
+ E+ G F+VR S K Y LS L+ +P +H+ I+ S + E SI
Sbjct: 25 VAELLVHSGDFLVRESQGKQEYVLSVLWDGLP----RHFIIQ--SLDNLYRLEGEGFPSI 78
Query: 387 PEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVR 446
P ++++ L + R VP DKW ++ +L+L E++G G FG V
Sbjct: 79 PLLIDHLLSTQQPLTKKSGVV-LHRAVP------KDKWVLNHEDLVLGEQIGRGNFGEVF 131
Query: 447 RGKWRGSIDVAMMKEG--TMSED---DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
G+ R + +K T+ D F++EA+++ + H N+V+L GVC++ +PIYIV
Sbjct: 132 SGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191
Query: 502 D 502
+
Sbjct: 192 E 192
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
+ LNY R+SS+SDVW++G+L+WE F+ G PY L N + + V++G L P+
Sbjct: 285 EALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPE 338
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRL 479
D WEI L L ++LG+GQFG V + VA+ MK G+MS + F+ EA VM L
Sbjct: 8 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL 67
Query: 480 QHQNLVQLYGVCSKHRPIYIVTD 502
QH LV+L+ V +K PIYI+T+
Sbjct: 68 QHDKLVKLHAVVTKE-PIYIITE 89
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 38/54 (70%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
+ +N+ F+ KSDVW++G+L+ E+ T G++PY + N EV+ ++RG + +P+
Sbjct: 182 EAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPE 235
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
M GSLL++L+ E + + L+D Q+ +GMA++E+ NYIHR+ + +
Sbjct: 91 MAKGSLLDFLKSDEGS-KQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAA 140
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 43/53 (81%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
+ Y +F+++SDVW++GV++WE+FT GK P+ +L NTEV++ + +G +LE+P+
Sbjct: 207 IMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRV 259
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 430 ELMLLEELGSGQFGVVRRG--------KWRGSIDVAMMKEGTMS-EDDFIEEAKVMTRLQ 480
+++L ELG G FG V K + + V +K+ T++ DF EA+++T LQ
Sbjct: 16 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ 75
Query: 481 HQNLVQLYGVCSKHRPIYIV 500
H+++V+ YGVC P+ +V
Sbjct: 76 HEHIVKFYGVCGDGDPLIMV 95
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 15/72 (20%)
Query: 1 MRHGSLLNYLRRH-----------ENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHRE 47
M+HG L +LR H G +GL +L + Q+ GM YL +++HR+
Sbjct: 99 MKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRD 158
Query: 48 --TKKSLYPSSL 57
T+ L ++L
Sbjct: 159 LATRNCLVGANL 170
>pdb|1QLY|A Chain A, Nmr Study Of The Sh3 Domain From Bruton's Tyrosine Kinase,
20 Structures
Length = 58
Score = 66.2 bits (160), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
K VVALY + + DL L KG EY +++++ WW+ +DKNG GYIPSNYV E E
Sbjct: 2 KKVVALYDYMPMNANDLQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEAE 58
Score = 46.6 bits (109), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
K VVALY + + DL L KG EY +++++ WW+ +DKNG
Sbjct: 2 KKVVALYDYMPMNANDLQLRKGDEYFILEESNLPWWRARDKNG 44
>pdb|1AWW|A Chain A, Sh3 Domain From Bruton's Tyrosine Kinase, Nmr, 42
Structures
pdb|1AWX|A Chain A, Sh3 Domain From Bruton's Tyrosine Kinase, Nmr, Minimized
Average Structure
Length = 67
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
K VVALY + + DL L KG EY +++++ WW+ +DKNG GYIPSNYV E E
Sbjct: 9 KKVVALYDYMPMNANDLQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEAE 65
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
K VVALY + + DL L KG EY +++++ WW+ +DKNG
Sbjct: 9 KKVVALYDYMPMNANDLQLRKGDEYFILEESNLPWWRARDKNG 51
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 41/51 (80%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
Y +F+++SDVW++GV++WE+FT GK P+ +L NTE +D + +G LE+P+A
Sbjct: 234 YRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRA 284
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 9/82 (10%)
Query: 430 ELMLLEELGSGQFGVVRRGKW--------RGSIDVAMMKEGTMS-EDDFIEEAKVMTRLQ 480
+++L ELG G FG V + + + V +KE + S DF EA+++T LQ
Sbjct: 42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ 101
Query: 481 HQNLVQLYGVCSKHRPIYIVTD 502
HQ++V+ +GVC++ RP+ +V +
Sbjct: 102 HQHIVRFFGVCTEGRPLLMVFE 123
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 12/59 (20%)
Query: 1 MRHGSLLNYLRRH----------ENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHRE 47
MRHG L +LR H E+ G +GL LL + QV GM YL +++HR+
Sbjct: 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRD 183
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 41/51 (80%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
Y +F+++SDVW++GV++WE+FT GK P+ +L NTE +D + +G LE+P+A
Sbjct: 211 YRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRA 261
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 9/82 (10%)
Query: 430 ELMLLEELGSGQFGVVRRGKW--------RGSIDVAMMKEGTMS-EDDFIEEAKVMTRLQ 480
+++L ELG G FG V + + + V +KE + S DF EA+++T LQ
Sbjct: 19 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ 78
Query: 481 HQNLVQLYGVCSKHRPIYIVTD 502
HQ++V+ +GVC++ RP+ +V +
Sbjct: 79 HQHIVRFFGVCTEGRPLLMVFE 100
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 12/59 (20%)
Query: 1 MRHGSLLNYLRRH----------ENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHRE 47
MRHG L +LR H E+ G +GL LL + QV GM YL +++HR+
Sbjct: 102 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRD 160
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 41/51 (80%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
Y +F+++SDVW++GV++WE+FT GK P+ +L NTE +D + +G LE+P+A
Sbjct: 205 YRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRA 255
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 9/82 (10%)
Query: 430 ELMLLEELGSGQFGVVRRGKW--------RGSIDVAMMKEGTMS-EDDFIEEAKVMTRLQ 480
+++L ELG G FG V + + + V +KE + S DF EA+++T LQ
Sbjct: 13 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ 72
Query: 481 HQNLVQLYGVCSKHRPIYIVTD 502
HQ++V+ +GVC++ RP+ +V +
Sbjct: 73 HQHIVRFFGVCTEGRPLLMVFE 94
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 12/59 (20%)
Query: 1 MRHGSLLNYLRRH----------ENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHRE 47
MRHG L +LR H E+ G +GL LL + QV GM YL +++HR+
Sbjct: 96 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRD 154
>pdb|2YUQ|A Chain A, Solution Structure Of The Sh3 Domain Of Human Tyrosine-
Protein Kinase ItkTSK
Length = 85
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 48/74 (64%)
Query: 117 RKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSN 176
R+P VV+ALY ++ + +L+L + EY ++D ++ HWW+V+D+NG GY+PS+
Sbjct: 11 RRPLWEPEETVVIALYDYQTNDPQELALRRNEEYCLLDSSEIHWWRVQDRNGHEGYVPSS 70
Query: 177 YVKEKELLGLQKYD 190
Y+ EK L+ Y+
Sbjct: 71 YLVEKSPNNLETYE 84
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 31/42 (73%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
VV+ALY ++ + +L+L + EY ++D ++ HWW+V+D+NG
Sbjct: 21 VVIALYDYQTNDPQELALRRNEEYCLLDSSEIHWWRVQDRNG 62
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRG------SIDVAMMKEGTMSE----DDFIEEAKV 475
I +L LLE+LG G FGVVRRG+W S+ V +K +S+ DDFI E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFRLGLLAD 513
M L H+NL++LYGV P+ +VT+ + LG L D
Sbjct: 65 MHSLDHRNLIRLYGVVLTP-PMKMVTELAP--LGSLLD 99
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQR-GIILEKPK 255
L FS SD W +GV +WE+FT G+ P+ L ++++ ++ + G L +P+
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE 238
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
GSLL+ LR+H+ +G L +QV +GM YLE +IHR+
Sbjct: 95 GSLLDRLRKHQGHF--LLGTLSRYAVQVAEGMGYLESKRFIHRD 136
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRG------SIDVAMMKEGTMSE----DDFIEEAKV 475
I +L LLE+LG G FGVVRRG+W S+ V +K +S+ DDFI E
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFRLGLLAD 513
M L H+NL++LYGV P+ +VT+ + LG L D
Sbjct: 69 MHSLDHRNLIRLYGVVLTP-PMKMVTELAP--LGSLLD 103
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQR-GIILEKPK 255
L FS SD W +GV +WE+FT G+ P+ L ++++ ++ + G L +P+
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE 242
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
GSLL+ LR+H+ +G L +QV +GM YLE +IHR+
Sbjct: 99 GSLLDRLRKHQGHF--LLGTLSRYAVQVAEGMGYLESKRFIHRD 140
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRG------SIDVAMMKEGTMSE----DDFIEEAKV 475
I +L LLE+LG G FGVVRRG+W S+ V +K +S+ DDFI E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFRLGLLAD 513
M L H+NL++LYGV P+ +VT+ + LG L D
Sbjct: 65 MHSLDHRNLIRLYGVVLTP-PMKMVTELAP--LGSLLD 99
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQR-GIILEKPK 255
L FS SD W +GV +WE+FT G+ P+ L ++++ ++ + G L +P+
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE 238
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
GSLL+ LR+H+ +G L +QV +GM YLE +IHR+
Sbjct: 95 GSLLDRLRKHQGHF--LLGTLSRYAVQVAEGMGYLESKRFIHRD 136
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRG------SIDVAMMKEGTMSE----DDFIEEAKV 475
I +L LLE+LG G FGVVRRG+W S+ V +K +S+ DDFI E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFRLGLLAD 513
M L H+NL++LYGV P+ +VT+ + LG L D
Sbjct: 65 MHSLDHRNLIRLYGVVLTP-PMKMVTELAP--LGSLLD 99
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQR-GIILEKPK 255
L FS SD W +GV +WE+FT G+ P+ L ++++ ++ + G L +P+
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE 238
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
GSLL+ LR+H+ +G L +QV +GM YLE +IHR+
Sbjct: 95 GSLLDRLRKHQGHF--LLGTLSRYAVQVAEGMGYLESKRFIHRD 136
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRG------SIDVAMMKEGTMSE----DDFIEEAKV 475
I +L LLE+LG G FGVVRRG+W S+ V +K +S+ DDFI E
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFRLGLLAD 513
M L H+NL++LYGV P+ +VT+ + LG L D
Sbjct: 69 MHSLDHRNLIRLYGVVLTP-PMKMVTELAP--LGSLLD 103
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQR-GIILEKPK 255
L FS SD W +GV +WE+FT G+ P+ L ++++ ++ + G L +P+
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE 242
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
GSLL+ LR+H+ +G L +QV +GM YLE +IHR+
Sbjct: 99 GSLLDRLRKHQGHF--LLGTLSRYAVQVAEGMGYLESKRFIHRD 140
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRG------SIDVAMMKEGTMSE----DDFIEEAKV 475
I +L LLE+LG G FGVVRRG+W S+ V +K +S+ DDFI E
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFRLGLLAD 513
M L H+NL++LYGV P+ +VT+ + LG L D
Sbjct: 75 MHSLDHRNLIRLYGVVLTP-PMKMVTELAP--LGSLLD 109
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQR-GIILEKPK 255
+ L FS SD W +GV +WE+FT G+ P+ L ++++ ++ + G L +P+
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE 248
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
GSLL+ LR+H+ +G L +QV +GM YLE +IHR+
Sbjct: 105 GSLLDRLRKHQGHF--LLGTLSRYAVQVAEGMGYLESKRFIHRD 146
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRG------SIDVAMMKEGTMSE----DDFIEEAKV 475
I +L LLE+LG G FGVVRRG+W S+ V +K +S+ DDFI E
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFRLGLLAD 513
M L H+NL++LYGV P+ +VT+ + LG L D
Sbjct: 75 MHSLDHRNLIRLYGVVLTP-PMKMVTELAP--LGSLLD 109
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQR-GIILEKPK 255
+ L FS SD W +GV +WE+FT G+ P+ L ++++ ++ + G L +P+
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE 248
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
GSLL+ LR+H+ +G L +QV +GM YLE +IHR+
Sbjct: 105 GSLLDRLRKHQGHF--LLGTLSRYAVQVAEGMGYLESKRFIHRD 146
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 40/51 (78%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
Y +F+++SDVW+ GV++WE+FT GK P+ +L N EV++ + +G +L++P+
Sbjct: 204 YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRT 254
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 9/79 (11%)
Query: 431 LMLLEELGSGQFGVVRRGKW--------RGSIDVAMMKEGT-MSEDDFIEEAKVMTRLQH 481
++L ELG G FG V + + + V +K+ + + DF EA+++T LQH
Sbjct: 15 IVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQH 74
Query: 482 QNLVQLYGVCSKHRPIYIV 500
+++V+ YGVC + P+ +V
Sbjct: 75 EHIVKFYGVCVEGDPLIMV 93
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
+ +NY +FSSKSDVW++GVLMWE F+ G+ PY +K +EV +++G
Sbjct: 543 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 589
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 118/304 (38%), Gaps = 64/304 (21%)
Query: 245 VQRGIILEKPK-------------AWYVGDMSRQRAESI-LKQEDKEGCFVVRNSSTKGL 290
+++ II +KP+ W+ G +SR+ +E I L G F++R G
Sbjct: 144 LEQAIISQKPQLEKLIATTAHEKMPWFHGKISREESEQIVLIGSKTNGKFLIRARDNNGS 203
Query: 291 YTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD-----KEGCFVVRNSST 345
Y L L + V HY I ++ G+ + E ++ ++ + +G V
Sbjct: 204 YALCL---LHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHYSYKADGLLRVLTVPC 260
Query: 346 KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLK 405
+ + T P + H S G K +S P+ HR +S +R +
Sbjct: 261 QKIGTQGNVNFGGRPQLPGSHPATWSAGGIISRIK--SYSFPKPG--HRKSSPAQGNRQE 316
Query: 406 TSPCDRPV-PATAGLSHDKW---------------------EIDPAE------LMLLE-- 435
++ P P A + DK EI P E L+ LE
Sbjct: 317 STVSFNPYEPELAPWAADKGPQREALPMDTEVYESPYADPEEIRPKEVYLDRKLLTLEDK 376
Query: 436 ELGSGQFGVVRRGKWRGSIDVAMMKEGTMS--------EDDFIEEAKVMTRLQHQNLVQL 487
ELGSG FG V++G ++ V + + +D+ + EA VM +L + +V++
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 488 YGVC 491
G+C
Sbjct: 437 IGIC 440
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
G L YL+++ + N+ +++ QV GM YLE N++HR+
Sbjct: 455 GPLNKYLQQNRHVKDKNI---IELVHQVSMGMKYLEESNFVHRD 495
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
+ +NY +FSSKSDVW++GVLMWE F+ G+ PY +K +EV +++G
Sbjct: 542 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 588
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 118/304 (38%), Gaps = 64/304 (21%)
Query: 245 VQRGIILEKPK-------------AWYVGDMSRQRAESI-LKQEDKEGCFVVRNSSTKGL 290
+++ II +KP+ W+ G +SR+ +E I L G F++R G
Sbjct: 143 LEQAIISQKPQLEKLIATTAHEKMPWFHGKISREESEQIVLIGSKTNGKFLIRARDNNGS 202
Query: 291 YTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD-----KEGCFVVRNSST 345
Y L L + V HY I ++ G+ + E ++ ++ + +G V
Sbjct: 203 YALCL---LHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHYSYKADGLLRVLTVPC 259
Query: 346 KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLK 405
+ + T P + H S G K +S P+ HR +S +R +
Sbjct: 260 QKIGTQGNVNFGGRPQLPGSHPATWSAGGIISRIK--SYSFPKPG--HRKSSPAQGNRQE 315
Query: 406 TSPCDRPV-PATAGLSHDKW---------------------EIDPAE------LMLLE-- 435
++ P P A + DK EI P E L+ LE
Sbjct: 316 STVSFNPYEPELAPWAADKGPQREALPMDTEVFESPFADPEEIRPKEVYLDRKLLTLEDK 375
Query: 436 ELGSGQFGVVRRGKWRGSIDVAMMKEGTMS--------EDDFIEEAKVMTRLQHQNLVQL 487
ELGSG FG V++G ++ V + + +D+ + EA VM +L + +V++
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 488 YGVC 491
G+C
Sbjct: 436 IGIC 439
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
G L YL+++ + N+ +++ QV GM YLE N++HR+
Sbjct: 454 GPLNKYLQQNRHVKDKNI---IELVHQVSMGMKYLEESNFVHRD 494
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
+ +NY +FSSKSDVW++GVLMWE F+ G+ PY +K +EV +++G
Sbjct: 198 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 244
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 16/86 (18%)
Query: 422 DKWEIDPAE------LMLLE--ELGSGQFGVVRRGKWRGSIDVAMMKEGTMS-------- 465
D EI P E L+ LE ELGSG FG V++G ++ V + +
Sbjct: 10 DPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 69
Query: 466 EDDFIEEAKVMTRLQHQNLVQLYGVC 491
+D+ + EA VM +L + +V++ G+C
Sbjct: 70 KDELLAEANVMQQLDNPYIVRMIGIC 95
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
G L YL+++ + N+ +++ QV GM YLE N++HR+
Sbjct: 110 GPLNKYLQQNRHVKDKNI---IELVHQVSMGMKYLEESNFVHRD 150
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
+ +NY +FSSKSDVW++GVLMWE F+ G+ PY +K +EV +++G
Sbjct: 200 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 246
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 16/86 (18%)
Query: 422 DKWEIDPAE------LMLLE--ELGSGQFGVVRRGKWRGSIDVAMMKEGTMS-------- 465
D EI P E L+ LE ELGSG FG V++G ++ V + +
Sbjct: 12 DPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 71
Query: 466 EDDFIEEAKVMTRLQHQNLVQLYGVC 491
+D+ + EA VM +L + +V++ G+C
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGIC 97
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
G L YL+++ + N+ +++ QV GM YLE N++HR+
Sbjct: 112 GPLNKYLQQNRHVKDKNI---IELVHQVSMGMKYLEESNFVHRD 152
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
+ +NY +FSSKSDVW++GVLMWE F+ G+ PY +K +EV +++G
Sbjct: 200 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 246
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 16/86 (18%)
Query: 422 DKWEIDPAE------LMLLE--ELGSGQFGVVRRGKWRGSIDVAMMKEGTMS-------- 465
D EI P E L+ LE ELGSG FG V++G ++ V + +
Sbjct: 12 DPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 71
Query: 466 EDDFIEEAKVMTRLQHQNLVQLYGVC 491
+D+ + EA VM +L + +V++ G+C
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGIC 97
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
G L YL+++ + N+ +++ QV GM YLE N++HR+
Sbjct: 112 GPLNKYLQQNRHVKDKNI---IELVHQVSMGMKYLEESNFVHRD 152
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
+ +NY +FSSKSDVW++GVLMWE F+ G+ PY +K +EV +++G
Sbjct: 190 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 236
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 16/83 (19%)
Query: 425 EIDPAE------LMLLE--ELGSGQFGVVRRGKWRGSIDVAMMKEGTMS--------EDD 468
EI P E L+ LE ELGSG FG V++G ++ V + + +D+
Sbjct: 5 EIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE 64
Query: 469 FIEEAKVMTRLQHQNLVQLYGVC 491
+ EA VM +L + +V++ G+C
Sbjct: 65 LLAEANVMQQLDNPYIVRMIGIC 87
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
G L YL+++ + N+ +++ QV GM YLE N++HR+
Sbjct: 102 GPLNKYLQQNRHVKDKNI---IELVHQVSMGMKYLEESNFVHRD 142
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
+ +NY +FSSKSDVW++GVLMWE F+ G+ PY +K +EV +++G
Sbjct: 184 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 230
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 430 ELMLLE--ELGSGQFGVVRRGKWRGSIDVAMMKEGTMS--------EDDFIEEAKVMTRL 479
+L+ LE ELGSG FG V++G ++ V + + +D+ + EA VM +L
Sbjct: 10 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL 69
Query: 480 QHQNLVQLYGVC 491
+ +V++ G+C
Sbjct: 70 DNPYIVRMIGIC 81
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
G L YL+++ + N+ +++ QV GM YLE N++HR+
Sbjct: 96 GPLNKYLQQNRHVKDKNI---IELVHQVSMGMKYLEESNFVHRD 136
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
+ +NY +FSSKSDVW++GVLMWE F+ G+ PY +K +EV +++G
Sbjct: 184 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 230
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 430 ELMLLE--ELGSGQFGVVRRGKWRGSIDVAMMKEGTMS--------EDDFIEEAKVMTRL 479
+L+ LE ELGSG FG V++G ++ V + + +D+ + EA VM +L
Sbjct: 10 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL 69
Query: 480 QHQNLVQLYGVC 491
+ +V++ G+C
Sbjct: 70 DNPYIVRMIGIC 81
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
G L YL+++ + N+ +++ QV GM YLE N++HR+
Sbjct: 96 GPLNKYLQQNRHVKDKNI---IELVHQVSMGMKYLEESNFVHRD 136
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
+ +NY +FSSKSDVW++GVLMWE F+ G+ PY +K +EV +++G
Sbjct: 178 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 224
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 430 ELMLLE--ELGSGQFGVVRRGKWRGSIDVAMMKEGTMS--------EDDFIEEAKVMTRL 479
+L+ LE ELGSG FG V++G ++ V + + +D+ + EA VM +L
Sbjct: 4 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL 63
Query: 480 QHQNLVQLYGVC 491
+ +V++ G+C
Sbjct: 64 DNPYIVRMIGIC 75
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
G L YL+++ + N+ +++ QV GM YLE N++HR+
Sbjct: 90 GPLNKYLQQNRHVKDKNI---IELVHQVSMGMKYLEESNFVHRD 130
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
+ +NY +FSSKSDVW++GVLMWE F+ G+ PY +K +EV +++G
Sbjct: 180 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 226
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 430 ELMLLE--ELGSGQFGVVRRGKWRGSIDVAMMKEGTMS--------EDDFIEEAKVMTRL 479
+L+ LE ELGSG FG V++G ++ V + + +D+ + EA VM +L
Sbjct: 6 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL 65
Query: 480 QHQNLVQLYGVC 491
+ +V++ G+C
Sbjct: 66 DNPYIVRMIGIC 77
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
G L YL+++ + N+ +++ QV GM YLE N++HR+
Sbjct: 92 GPLNKYLQQNRHVKDKNI---IELVHQVSMGMKYLEESNFVHRD 132
>pdb|2LMJ|A Chain A, Itk-Sh3
Length = 66
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 41/55 (74%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
VV+ALY ++ + +L+L + EY ++D ++ HWW+V+D+NG GY+PS+Y+ EK
Sbjct: 10 VVIALYDYQTNDPQELALRRNEEYCLLDSSEIHWWRVQDRNGHEGYVPSSYLVEK 64
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 31/42 (73%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
VV+ALY ++ + +L+L + EY ++D ++ HWW+V+D+NG
Sbjct: 10 VVIALYDYQTNDPQELALRRNEEYCLLDSSEIHWWRVQDRNG 51
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQN 483
W ++ EL LL+ +G G+FG V G +RG+ + + F+ EA VMT+L+H N
Sbjct: 16 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSN 75
Query: 484 LVQLYGVCSKHR-PIYIVTD 502
LVQL GV + + +YIVT+
Sbjct: 76 LVQLLGVIVEEKGGLYIVTE 95
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 40/53 (75%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ L +FS+KSDVW++G+L+WE+++ G++PY R+ +VV RV++G ++ P
Sbjct: 184 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP 236
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 1 MRHGSLLNYLR-RHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M GSL++YLR R + LGG+ LL + VC+ M YLE +N++HR+
Sbjct: 97 MAKGSLVDYLRSRGRSVLGGDC--LLKFSLDVCEAMEYLEGNNFVHRD 142
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQN 483
W ++ EL LL+ +G G+FG V G +RG+ + + F+ EA VMT+L+H N
Sbjct: 1 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSN 60
Query: 484 LVQLYGVCSKHR-PIYIVTD 502
LVQL GV + + +YIVT+
Sbjct: 61 LVQLLGVIVEEKGGLYIVTE 80
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 40/53 (75%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ L +FS+KSDVW++G+L+WE+++ G++PY R+ +VV RV++G ++ P
Sbjct: 169 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP 221
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 1 MRHGSLLNYLR-RHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M GSL++YLR R + LGG+ LL + VC+ M YLE +N++HR+
Sbjct: 82 MAKGSLVDYLRSRGRSVLGGDC--LLKFSLDVCEAMEYLEGNNFVHRD 127
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQN 483
W ++ EL LL+ +G G+FG V G +RG+ + + F+ EA VMT+L+H N
Sbjct: 7 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSN 66
Query: 484 LVQLYGVCSKHR-PIYIVTD 502
LVQL GV + + +YIVT+
Sbjct: 67 LVQLLGVIVEEKGGLYIVTE 86
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 39/53 (73%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ L FS+KSDVW++G+L+WE+++ G++PY R+ +VV RV++G ++ P
Sbjct: 175 EALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP 227
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 1 MRHGSLLNYLR-RHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M GSL++YLR R + LGG+ LL + VC+ M YLE +N++HR+
Sbjct: 88 MAKGSLVDYLRSRGRSVLGGDC--LLKFSLDVCEAMEYLEGNNFVHRD 133
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 38/53 (71%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ +N+ +FSS+SDVW+YGV MWE + G+ PY ++K EV+ +++G +E P
Sbjct: 509 ECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP 561
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 112/268 (41%), Gaps = 58/268 (21%)
Query: 257 WYVGDMSRQRAESIL-KQEDKEGCFVVRNSSTKGLYTLSL-YTKVPHPHVKHYHIKQNSR 314
WY ++R+ AE L +G F++R +G Y LSL Y K V HY I Q+
Sbjct: 163 WYHSSLTREEAERKLYSGAQTDGKFLLRPRKEQGTYALSLIYGKT----VYHYLISQDKA 218
Query: 315 GEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE 374
G K+C IPE + L+ L Y K+ + + +
Sbjct: 219 G------KYC---IPE-----------GTKFDTLWQLVEYLKLKADGLIYCLKEACPNSS 258
Query: 375 FFLSEKHCCHSIPEVVNYHRH--------NSGGLA---SRLKTSPCDRPVPATAGLSHDK 423
+ ++P + H NS G +R+ + RP+P +
Sbjct: 259 ASNASGAAAPTLPAHPSTLTHPQRRIDTLNSDGYTPEPARITSPDKPRPMPMDTSVFESP 318
Query: 424 WEIDPAEL----MLLE---------ELGSGQFGVVRRGKWR---GSIDVAM--MKEGTMS 465
+ DP EL + L+ ELG G FG VR+G +R IDVA+ +K+GT
Sbjct: 319 FS-DPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEK 377
Query: 466 ED--DFIEEAKVMTRLQHQNLVQLYGVC 491
D + + EA++M +L + +V+L GVC
Sbjct: 378 ADTEEMMREAQIMHQLDNPYIVRLIGVC 405
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 38/53 (71%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ +N+ +FSS+SDVW+YGV MWE + G+ PY ++K EV+ +++G +E P
Sbjct: 183 ECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP 235
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 7/63 (11%)
Query: 436 ELGSGQFGVVRRGKWR---GSIDVAM--MKEGTMSED--DFIEEAKVMTRLQHQNLVQLY 488
ELG G FG VR+G +R IDVA+ +K+GT D + + EA++M +L + +V+L
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 489 GVC 491
GVC
Sbjct: 77 GVC 79
>pdb|1AWJ|A Chain A, Intramolecular Itk-Proline Complex, Nmr, Minimized Average
Structure
Length = 77
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 112 DKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVG 171
++ ++P++ + V+ALY ++ + +L+L EY ++D ++ HWW+V+DKNG G
Sbjct: 11 NRRSFQEPEETL----VIALYDYQTNDPQELALRCDEEYYLLDSSEIHWWRVQDKNGHEG 66
Query: 172 YIPSNYVKEK 181
Y PS+Y+ EK
Sbjct: 67 YAPSSYLVEK 76
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 49 KKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW 108
KK L P+ + P++ + V+ALY ++ + +L+L EY ++D ++ HWW
Sbjct: 1 KKPLPPTPEDNRRSFQEPEETL----VIALYDYQTNDPQELALRCDEEYYLLDSSEIHWW 56
Query: 109 KVKDKNG 115
+V+DKNG
Sbjct: 57 RVQDKNG 63
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ ++Y +F+S SDVW++G++MWEV T G+ PY L N EV+ + G L P
Sbjct: 220 EAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTP 272
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 9/87 (10%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRGS-------IDVAMMKEGTMSED--DFIEEAKV 475
EI P+ + + +G+G+FG V +G + S + + +K G + DF+ EA +
Sbjct: 40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI 99
Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTD 502
M + H N+++L GV SK++P+ I+T+
Sbjct: 100 MGQFSHHNIIRLEGVISKYKPMMIITE 126
Score = 32.0 bits (71), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G+L +LR + +V L+ M + GM YL NY+HR+
Sbjct: 128 MENGALDKFLREKDGEF--SVLQLVGMLRGIAAGMKYLANMNYVHRD 172
>pdb|2K79|A Chain A, Solution Structure Of The Binary Complex Between The Sh3
And Sh2 Domain Of Interleukin-2 Tyrosine Kinase
pdb|2K7A|A Chain A, Ensemble Structures Of The Binary Complex Between The Sh3
And Sh2 Domain Of Interleukin-2 Tyrosine Kinase
Length = 63
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
+V+ALY ++ + +L+L EY ++D ++ HWW+V+DKNG GY PS+Y+ EK
Sbjct: 7 LVIALYDYQTNDPQELALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLVEK 61
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 30/42 (71%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
+V+ALY ++ + +L+L EY ++D ++ HWW+V+DKNG
Sbjct: 7 LVIALYDYQTNDPQELALRCDEEYYLLDSSEIHWWRVQDKNG 48
>pdb|2RN8|A Chain A, Nmr Structure Note: Murine Itk Sh3 Domain
pdb|2RNA|A Chain A, Itk Sh3 Average Minimized
Length = 64
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
+V+ALY ++ + +L+L EY ++D ++ HWW+V+DKNG GY PS+Y+ EK
Sbjct: 7 LVIALYDYQTNDPQELALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLVEK 61
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 30/42 (71%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
+V+ALY ++ + +L+L EY ++D ++ HWW+V+DKNG
Sbjct: 7 LVIALYDYQTNDPQELALRCDEEYYLLDSSEIHWWRVQDKNG 48
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ LNY+ +++ SDVW+YGVL+WE+ + G PY + E+ +++ +G LEKP
Sbjct: 201 ESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP 253
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGS---IDVAM--MKEGTMSED--DFIEEAKVMTR 478
+D ++ + +G G FG V + + + +D A+ MKE +D DF E +V+ +
Sbjct: 12 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK 71
Query: 479 L-QHQNLVQLYGVCSKHRPIYIVTD 502
L H N++ L G C +Y+ +
Sbjct: 72 LGHHPNIINLLGACEHRGYLYLAIE 96
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ LNY+ +++ SDVW+YGVL+WE+ + G PY + E+ +++ +G LEKP
Sbjct: 211 ESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP 263
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGS---IDVAM--MKEGTMSED--DFIEEAKVMTR 478
+D ++ + +G G FG V + + + +D A+ MKE +D DF E +V+ +
Sbjct: 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK 81
Query: 479 L-QHQNLVQLYGVCSKHRPIYIVTD 502
L H N++ L G C +Y+ +
Sbjct: 82 LGHHPNIINLLGACEHRGYLYLAIE 106
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ LNY+ +++ SDVW+YGVL+WE+ + G PY + E+ +++ +G LEKP
Sbjct: 208 ESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP 260
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 18/113 (15%)
Query: 398 GGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS---I 454
G L ++K +P P +D ++ + +G G FG V + + + +
Sbjct: 1 GALNRKVKNNPDPTIYPV----------LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRM 50
Query: 455 DVAM--MKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTD 502
D A+ MKE +D DF E +V+ +L H N++ L G C +Y+ +
Sbjct: 51 DAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIE 103
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + Y +F+S SDVW+YG++MWEV + G+ PY + N +V+ ++ G L P
Sbjct: 218 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAP 270
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR--GSIDVAM----MKEGTMSED--DFIEEAKVM 476
E+D + + + +G+G+FG V G+ + G DVA+ +K G + DF+ EA +M
Sbjct: 39 ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIM 98
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
+ H N+V L GV ++ +P+ IV +
Sbjct: 99 GQFDHPNVVHLEGVVTRGKPVMIVIE 124
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G+L +LR+H+ V L+ M + GM YL Y+HR+
Sbjct: 126 MENGALDAFLRKHDGQF--TVIQLVGMLRGIAAGMRYLADMGYVHRD 170
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+N+ RF+S SDVW +GV MWE+ G P+ +KN +V+ R++ G L P
Sbjct: 564 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 614
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG----SIDVAMMKEGTMSEDD----FIE 471
S +EI + L +G GQFG V +G + ++ VA+ + D F++
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
EA M + H ++V+L GV +++ P++I+ + +
Sbjct: 441 EALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTL 474
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+N+ RF+S SDVW +GV MWE+ G P+ +KN +V+ R++ G L P
Sbjct: 564 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 614
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG----SIDVAMMKEGTMSEDD----FIE 471
S +EI + L +G GQFG V +G + ++ VA+ + D F++
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
EA M + H ++V+L GV +++ P++I+ + +
Sbjct: 441 EALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTL 474
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
F+SK+D W++GVL+WE+F+ G MPY N EV++ V G ++ PK
Sbjct: 249 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 295
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIE 471
D E+ + L+ LG G FG V G+ G + V + E +D DF+
Sbjct: 50 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 109
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
EA ++++ HQN+V+ GV + P +I+ +
Sbjct: 110 EALIISKFNHQNIVRCIGVSLQSLPRFILLE 140
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
Y R++++SDVWAYGV++WE+F+ G PY + + EV+ V+ G IL P+
Sbjct: 250 YNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPE 299
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 10/117 (8%)
Query: 400 LASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG------- 452
L RL +P + +P E + + ++G G FG V + + G
Sbjct: 18 LLDRLHPNPMYQRMPLLLNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPF 77
Query: 453 -SIDVAMMKEGTMS--EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
+ V M+KE + + DF EA +M + N+V+L GVC+ +P+ ++ + ++
Sbjct: 78 TMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAY 134
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
F+SK+D W++GVL+WE+F+ G MPY N EV++ V G ++ PK
Sbjct: 263 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 309
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIE 471
D E+ + L+ LG G FG V G+ G + V + E +D DF+
Sbjct: 64 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 123
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
EA ++++ HQN+V+ GV + P +I+ +
Sbjct: 124 EALIISKFNHQNIVRCIGVSLQSLPRFILLE 154
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + Y +F+S SDVW+YG++MWEV + G+ PY + N +V+ ++ G L P
Sbjct: 189 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPP 241
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVAMMKEGTMSED--DFIEEAKVM 476
EID + + + + +G G+FG V G+ + + + +K G + DF+ EA +M
Sbjct: 10 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 69
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
+ H N++ L GV +K +P+ I+T+
Sbjct: 70 GQFDHPNIIHLEGVVTKCKPVMIITE 95
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
F+SK+D W++GVL+WE+F+ G MPY N EV++ V G ++ PK
Sbjct: 223 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 269
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIE 471
D E+ + L+ LG G FG V G+ G + V + E +D DF+
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
EA ++++L HQN+V+ GV + P +I+ +
Sbjct: 84 EALIISKLNHQNIVRCIGVSLQSLPRFILLE 114
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + Y +F+S SDVW+YG++MWEV + G+ PY + N +V+ ++ G L P
Sbjct: 204 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPP 256
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVAMMKEGTMSED--DFIEEAKVM 476
EID + + + + +G G+FG V G+ + + + +K G + DF+ EA +M
Sbjct: 25 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 84
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
+ H N++ L GV +K +P+ I+T+
Sbjct: 85 GQFDHPNIIHLEGVVTKCKPVMIITE 110
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
F+SK+D W++GVL+WE+F+ G MPY N EV++ V G ++ PK
Sbjct: 229 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 275
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIE 471
D E+ + L+ LG G FG V G+ G + V + E +D DF+
Sbjct: 30 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 89
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
EA ++++ HQN+V+ GV + P +I+ +
Sbjct: 90 EALIISKFNHQNIVRCIGVSLQSLPRFILLE 120
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
F+SK+D W++GVL+WE+F+ G MPY N EV++ V G ++ PK
Sbjct: 239 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 285
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIE 471
D E+ + L+ LG G FG V G+ G + V + E +D DF+
Sbjct: 40 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 99
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
EA ++++ HQN+V+ GV + P +I+ +
Sbjct: 100 EALIISKFNHQNIVRCIGVSLQSLPRFILLE 130
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
F+SK+D W++GVL+WE+F+ G MPY N EV++ V G ++ PK
Sbjct: 223 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 269
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIE 471
D E+ + L+ LG G FG V G+ G + V + E +D DF+
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
EA ++++ HQN+V+ GV + P +I+ +
Sbjct: 84 EALIISKFNHQNIVRCIGVSLQSLPRFILLE 114
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
F+SK+D W++GVL+WE+F+ G MPY N EV++ V G ++ PK
Sbjct: 223 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 269
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIE 471
D E+ + L+ LG G FG V G+ G + V + E +D DF+
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
EA ++++ HQN+V+ GV + P +I+ +
Sbjct: 84 EALIISKFNHQNIVRCIGVSLQSLPRFILLE 114
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
F+SK+D W++GVL+WE+F+ G MPY N EV++ V G ++ PK
Sbjct: 237 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 283
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIE 471
D E+ + L+ LG G FG V G+ G + V + E +D DF+
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLM 97
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
EA ++++ HQN+V+ GV + P +I+ +
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILLE 128
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + Y +F+S SDVW+YG++MWEV + G+ PY + N +V+ ++ G L P
Sbjct: 183 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPP 235
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVAMMKEGTMSED--DFIEEAKVM 476
EID + + + + +G G+FG V G+ + + + +K G + DF+ EA +M
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 63
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
+ H N++ L GV +K +P+ I+T+
Sbjct: 64 GQFDHPNIIHLEGVVTKCKPVMIITE 89
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
F+SK+D W++GVL+WE+F+ G MPY N EV++ V G ++ PK
Sbjct: 240 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 286
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIE 471
D E+ + L+ LG G FG V G+ G + V + E +D DF+
Sbjct: 41 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 100
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
EA ++++ HQN+V+ GV + P +I+ +
Sbjct: 101 EALIISKFNHQNIVRCIGVSLQSLPRFILLE 131
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
F+SK+D W++GVL+WE+F+ G MPY N EV++ V G ++ PK
Sbjct: 237 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 283
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIE 471
D E+ + L+ LG G FG V G+ G + V + E +D DF+
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 97
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
EA ++++ HQN+V+ GV + P +I+ +
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILME 128
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
F+SK+D W++GVL+WE+F+ G MPY N EV++ V G ++ PK
Sbjct: 237 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 283
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIE 471
D E+ + L+ LG G FG V G+ G + V + E +D DF+
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 97
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
EA ++++L HQN+V+ GV + P +I+ +
Sbjct: 98 EALIISKLNHQNIVRCIGVSLQSLPRFILLE 128
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + + +F+S SDVW+YG++MWEV + G+ PY + N +V+ V+ G L P
Sbjct: 197 EAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSP 249
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRGS------IDVAMMKEGTMSED--DFIEEAKVM 476
EI+ + + + +G+G+FG V G+ + + + +K G + DF+ EA +M
Sbjct: 18 EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIM 77
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
+ H N++ L GV +K +P+ IVT+
Sbjct: 78 GQFDHPNIIHLEGVVTKSKPVMIVTE 103
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+N+ RF+S SDVW +GV MWE+ G P+ +KN +V+ R++ G L P
Sbjct: 186 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 236
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 418 GLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG----SIDVAMMKEGTMSEDD----F 469
G S +EI + L +G GQFG V +G + ++ VA+ + D F
Sbjct: 1 GASTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF 60
Query: 470 IEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
++EA M + H ++V+L GV +++ P++I+ + +
Sbjct: 61 LQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTL 96
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
F+SK+D W++GVL+WE+F+ G MPY N EV++ V G ++ PK
Sbjct: 222 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 268
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIE 471
D E+ + L+ LG G FG V G+ G + V + E +D DF+
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 82
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
EA ++++ HQN+V+ GV + P +I+ +
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILME 113
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
F+SK+D W++GVL+WE+F+ G MPY N EV++ V G ++ PK
Sbjct: 222 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 268
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIE 471
D E+ + L+ LG G FG V G+ G + V + E +D DF+
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 82
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
EA ++++ HQN+V+ GV + P +I+ +
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILLE 113
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
F+SK+D W++GVL+WE+F+ G MPY N EV++ V G ++ PK
Sbjct: 214 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 260
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIE 471
D E+ + L+ LG G FG V G+ G + V + E +D DF+
Sbjct: 15 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 74
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
EA ++++ HQN+V+ GV + P +I+ +
Sbjct: 75 EALIISKFNHQNIVRCIGVSLQSLPRFILLE 105
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+N+ RF+S SDVW +GV MWE+ G P+ +KN +V+ R++ G L P
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 234
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG----SIDVAMMKEGTMSEDD----FIE 471
S +EI + L +G GQFG V +G + ++ VA+ + D F++
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
EA M + H ++V+L GV +++ P++I+ + +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTL 94
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+N+ RF+S SDVW +GV MWE+ G P+ +KN +V+ R++ G L P
Sbjct: 181 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 231
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRG----SIDVAMMKEGTMSEDD----FIEEAKV 475
+EI + L +G GQFG V +G + ++ VA+ + D F++EA
Sbjct: 2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALT 61
Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
M + H ++V+L GV +++ P++I+ + +
Sbjct: 62 MRQFDHPHIVKLIGVITEN-PVWIIMELCTL 91
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+N+ RF+S SDVW +GV MWE+ G P+ +KN +V+ R++ G L P
Sbjct: 189 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 239
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 418 GLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG----SIDVAMMKEGTMSEDD----F 469
G S +EI + L +G GQFG V +G + ++ VA+ + D F
Sbjct: 4 GSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF 63
Query: 470 IEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
++EA M + H ++V+L GV +++ P++I+ + +
Sbjct: 64 LQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTL 99
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+N+ RF+S SDVW +GV MWE+ G P+ +KN +V+ R++ G L P
Sbjct: 212 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 262
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 418 GLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG----SIDVAMMKEGTMSEDD----F 469
G S +EI + L +G GQFG V +G + ++ VA+ + D F
Sbjct: 27 GSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF 86
Query: 470 IEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
++EA M + H ++V+L GV +++ P++I+ + +
Sbjct: 87 LQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTL 122
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+N+ RF+S SDVW +GV MWE+ G P+ +KN +V+ R++ G L P
Sbjct: 187 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 237
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 417 AGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG----SIDVAMMKEGTMSEDD---- 468
+G + D +EI + L +G GQFG V +G + ++ VA+ + D
Sbjct: 2 SGSTRD-YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK 60
Query: 469 FIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
F++EA M + H ++V+L GV +++ P++I+ + +
Sbjct: 61 FLQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTL 97
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+N+ RF+S SDVW +GV MWE+ G P+ +KN +V+ R++ G L P
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 234
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG----SIDVAMMKEGTMSEDD----FIE 471
S +EI + L +G GQFG V +G + ++ VA+ + D F++
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
EA M + H ++V+L GV +++ P++I+ + +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTL 94
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+N+ RF+S SDVW +GV MWE+ G P+ +KN +V+ R++ G L P
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 234
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG----SIDVAMMKEGTMSEDD----FIE 471
S +EI + L +G GQFG V +G + ++ VA+ + D F++
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
EA M + H ++V+L GV +++ P++I+ + +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTL 94
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+N+ RF+S SDVW +GV MWE+ G P+ +KN +V+ R++ G L P
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 234
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG----SIDVAMMKEGTMSEDD----FIE 471
S +EI + L +G GQFG V +G + ++ VA+ + D F++
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
EA M + H ++V+L GV +++ P++I+ + +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTL 94
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 180 EKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT 239
+K+LL + + + LE IH + +++ +SDVW+YGV +WE+ T G PY L+
Sbjct: 187 DKQLLYSEAKTPIKWMALESIH----FGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA 242
Query: 240 EVVDRVQRGIILEKPK 255
EV D +++G L +P+
Sbjct: 243 EVPDLLEKGERLAQPQ 258
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
GSLL+++R+H LG LLL+ +Q+ KGM YLE H +HR
Sbjct: 117 GSLLDHVRQHRGALGPQ--LLLNWGVQIAKGMYYLEEHGMVHR 157
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKWRGS---------IDVAMMKEGTMSEDDFIEEAKVMTRL 479
EL L+ LGSG FG V +G W I V K G S + + L
Sbjct: 31 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 90
Query: 480 QHQNLVQLYGVC 491
H ++V+L G+C
Sbjct: 91 DHAHIVRLLGLC 102
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + Y +F+S SDVW+YG++MWEV + G+ PY + N +V++ +++ L P
Sbjct: 210 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPP 262
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVV------RRGKWRGSIDVAMMKEGTMSED--DFIEEAKVM 476
EID + + + + +G+G+FG V GK + + +K G + DF+ EA +M
Sbjct: 29 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 88
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
+ H N++ L GV +K P+ I+T+
Sbjct: 89 GQFDHPNVIHLEGVVTKSTPVMIITE 114
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +GSL ++LR+++ V L+ M + GM YL NY+HR+
Sbjct: 116 MENGSLDSFLRQNDGQF--TVIQLVGMLRGIAAGMKYLADMNYVHRD 160
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 180 EKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT 239
+K+LL + + + LE IH + +++ +SDVW+YGV +WE+ T G PY L+
Sbjct: 169 DKQLLYSEAKTPIKWMALESIH----FGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA 224
Query: 240 EVVDRVQRGIILEKPK 255
EV D +++G L +P+
Sbjct: 225 EVPDLLEKGERLAQPQ 240
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
GSLL+++R+H LG LLL+ +Q+ KGM YLE H +HR
Sbjct: 99 GSLLDHVRQHRGALGPQ--LLLNWGVQIAKGMYYLEEHGMVHR 139
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKWRGS---------IDVAMMKEGTMSEDDFIEEAKVMTRL 479
EL L+ LGSG FG V +G W I V K G S + + L
Sbjct: 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 72
Query: 480 QHQNLVQLYGVC 491
H ++V+L G+C
Sbjct: 73 DHAHIVRLLGLC 84
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + Y +F+S SDVW+YG++MWEV + G+ PY + N +V++ +++ L P
Sbjct: 184 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPP 236
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRG------KWRGSIDVAMMKEGTMSED--DFIEEAKVM 476
EID + + + + +G+G+FG V G K + + +K G + DF+ EA +M
Sbjct: 3 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 62
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
+ H N++ L GV +K P+ I+T+
Sbjct: 63 GQFDHPNVIHLEGVVTKSTPVMIITE 88
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
M +GSL ++LR+++ V L+ M + GM YL NY+HR
Sbjct: 90 MENGSLDSFLRQNDGQF--TVIQLVGMLRGIAAGMKYLADMNYVHR 133
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + + FSS SDVW++GV+MWEV G+ PY + N +V+ V+ G L P
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAP 276
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 414 PATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWR--GSIDVAM----MKEGTMSED 467
P AG S + EI+ + + + + +GSG G V G+ R G DV + +K G
Sbjct: 35 PGRAGRSFTR-EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQ 93
Query: 468 --DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
DF+ EA +M + H N+++L GV ++ R IVT+
Sbjct: 94 RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTE 130
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +GSL +LR H+ + L+ M V GM YL Y+HR+
Sbjct: 132 MENGSLDTFLRTHDGQF--TIMQLVGMLRGVGAGMRYLSDLGYVHRD 176
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + + FSS SDVW++GV+MWEV G+ PY + N +V+ V+ G L P
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAP 276
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 414 PATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWR--GSIDVAM----MKEGTMSED 467
P AG S + EI+ + + + + +GSG G V G+ R G DV + +K G
Sbjct: 35 PGRAGRSFTR-EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQ 93
Query: 468 --DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
DF+ EA +M + H N+++L GV ++ R IVT+
Sbjct: 94 RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTE 130
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +GSL +LR H+ + L+ M V GM YL Y+HR+
Sbjct: 132 MENGSLDTFLRTHDGQF--TIMQLVGMLRGVGAGMRYLSDLGYVHRD 176
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + Y +F+S SDVW+YG+++WEV + G+ PY + N +V+ V G L P
Sbjct: 218 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 270
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR------GSIDVAMMKEGTMSED--DFIEEAKVM 476
E+D + + + +G+G+FG V G+ + S+ + +K G + DF+ EA +M
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 98
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
+ H N+++L GV +K +P+ IVT+
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTE 124
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +GSL ++LR+H+ V L+ M + GM YL Y+HR+
Sbjct: 126 MENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMGYVHRD 170
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + Y +F+S SDVW+YG+++WEV + G+ PY + N +V+ V G L P
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR------GSIDVAMMKEGTMSED--DFIEEAKVM 476
E+D + + + +G+G+FG V G+ + S+ + +K G + DF+ EA +M
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
+ H N+++L GV +K +P+ IVT+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTE 126
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +GSL ++LR+H+ V L+ M + GM YL Y+HR+
Sbjct: 128 MENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMGYVHRD 172
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + Y +F+S SDVW+YG+++WEV + G+ PY + N +V+ V G L P
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR------GSIDVAMMKEGTMSED--DFIEEAKVM 476
E+D + + + +G+G+FG V G+ + S+ + +K G + DF+ EA +M
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
+ H N+++L GV +K +P+ IVT+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTE 126
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +GSL ++LR+H+ V L+ M + GM YL Y+HR+
Sbjct: 128 MENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMGYVHRD 172
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + Y +F+S SDVW+YG+++WEV + G+ PY + N +V+ V G L P
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR------GSIDVAMMKEGTMSED--DFIEEAKVM 476
E+D + + + +G+G+FG V G+ + S+ + +K G + DF+ EA +M
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
+ H N+++L GV +K +P+ IVT+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTE 126
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +GSL ++LR+H+ V L+ M + GM YL +HR+
Sbjct: 128 MENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMGAVHRD 172
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + Y +F+S SDVW+YG+++WEV + G+ PY + N +V+ V G L P
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR------GSIDVAMMKEGTMSED--DFIEEAKVM 476
E+D + + + +G+G+FG V G+ + S+ + +K G + DF+ EA +M
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
+ H N+++L GV +K +P+ IVT+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTE 126
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +GSL ++LR+H+ V L+ M + GM YL Y+HR+
Sbjct: 128 MENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMGYVHRD 172
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + Y +F+S SDVW+YG+++WEV + G+ PY + N +V+ V G L P
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR------GSIDVAMMKEGTMSED--DFIEEAKVM 476
E+D + + + +G+G+FG V G+ + S+ + +K G + DF+ EA +M
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
+ H N+++L GV +K +P+ IVT+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTE 126
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +GSL ++LR+H+ V L+ M + GM YL Y+HR+
Sbjct: 128 MENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMGYVHRD 172
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + Y +F+S SDVW+YG+++WEV + G+ PY + N +V+ V G L P
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR------GSIDVAMMKEGTMSED--DFIEEAKVM 476
E+D + + + +G+G+FG V G+ + S+ + +K G + DF+ EA +M
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
+ H N+++L GV +K +P+ IVT+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTE 126
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +GSL ++LR+H+ V L+ M + GM YL Y+HR+
Sbjct: 128 MENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMGYVHRD 172
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+N+ RF++ SDVW + V MWE+ + GK P+ L+N +V+ +++G L KP
Sbjct: 186 INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKP 236
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
+G L +YL R++N+L V L+ +Q+CK MAYLE N +HR+
Sbjct: 96 YGELGHYLERNKNSL--KVLTLVLYSLQICKAMAYLESINCVHRD 138
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + Y +F+S SDVW+YG+++WEV + G+ PY + N +V+ V G L P
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR------GSIDVAMMKEGTMSED--DFIEEAKVM 476
E+D + + + +G+G+FG V G+ + S+ + +K G + DF+ EA +M
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
+ H N+++L GV +K +P+ IVT+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTE 126
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +GSL ++LR+H+ V L+ M + GM YL Y+HR+
Sbjct: 128 MENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMGYVHRD 172
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+N+ RF++ SDVW + V MWE+ + GK P+ L+N +V+ +++G L KP
Sbjct: 182 INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKP 232
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
+G L +YL R++N+L V L+ +Q+CK MAYLE N +HR+
Sbjct: 92 YGELGHYLERNKNSL--KVLTLVLYSLQICKAMAYLESINCVHRD 134
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + Y +F+S SDVW+YG+++WEV + G+ PY + N +V+ V G L P
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR------GSIDVAMMKEGTMSED--DFIEEAKVM 476
E+D + + + +G+G+FG V G+ + S+ + +K G + DF+ EA +M
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
+ H N+++L GV +K +P+ IVT+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTE 126
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +GSL ++LR+H+ V L+ M + GM YL Y+HR+
Sbjct: 128 MENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMGYVHRD 172
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+N+ RF++ SDVW + V MWE+ + GK P+ L+N +V+ +++G L KP
Sbjct: 198 INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKP 248
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
+G L +YL R++N+L V L+ +Q+CK MAYLE N +HR+
Sbjct: 108 YGELGHYLERNKNSL--KVLTLVLYSLQICKAMAYLESINCVHRD 150
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + Y +F+S SDVW+YG+++WEV + G+ PY + N +V+ V G L P
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR------GSIDVAMMKEGTMSED--DFIEEAKVM 476
E+D + + + +G+G+FG V G+ + S+ + +K G + DF+ EA +M
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
+ H N+++L GV +K +P+ IVT+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTE 126
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +GSL ++LR+H+ V L+ M + GM YL ++HR+
Sbjct: 128 MENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMGFVHRD 172
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + Y +F+S SDVW+YG+++WEV + G+ PY + N +V+ V G L P
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 243
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR------GSIDVAMMKEGTMSED--DFIEEAKVM 476
E+D + + + +G+G+FG V G+ + S+ + +K G + DF+ EA +M
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
+ H N+++L GV +K +P+ IVT+
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTE 97
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +GSL ++LR+H+ V L+ M + GM YL Y+HR+
Sbjct: 99 MENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMGYVHRD 143
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + Y +F+S SDVW+YG+++WEV + G+ PY + N +V+ V G L P
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 243
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR------GSIDVAMMKEGTMSED--DFIEEAKVM 476
E+D + + + +G+G+FG V G+ + S+ + +K G + DF+ EA +M
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
+ H N+++L GV +K +P+ IVT+
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTE 97
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +GSL ++LR+H+ V L+ M + GM YL Y+HR+
Sbjct: 99 MENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMGYVHRD 143
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + Y +F+S SDVW+YG+++WEV + G+ PY + N +V+ V G L P
Sbjct: 208 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 260
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR------GSIDVAMMKEGTMSED--DFIEEAKVM 476
E+D + + + +G+G+FG V G+ + S+ + +K G + DF+ EA +M
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 88
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
+ H N+++L GV +K +P+ IVT+
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTE 114
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +GSL ++LR+H+ V L+ M + GM YL Y+HR+
Sbjct: 116 MENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMGYVHRD 160
>pdb|3H0H|A Chain A, Human Fyn Sh3 Domain R96i Mutant, Crystal Form I
pdb|3H0I|A Chain A, Human Fyn Sh3 Domain R96i Mutant, Crystal Form Ii
pdb|3H0I|B Chain B, Human Fyn Sh3 Domain R96i Mutant, Crystal Form Ii
Length = 73
Score = 53.9 bits (128), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
VALY ++AI DLS KG ++++++ ++ WW+ + G GYIPSNYV
Sbjct: 19 VALYDYEAITEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 69
Score = 38.5 bits (88), Expect = 0.008, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 25/36 (69%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
VALY ++AI DLS KG ++++++ ++ WW+ +
Sbjct: 19 VALYDYEAITEDDLSFHKGEKFQILNSSEGDWWEAR 54
>pdb|1EFN|A Chain A, Hiv-1 Nef Protein In Complex With R96i Mutant Fyn Sh3
Domain
pdb|1EFN|C Chain C, Hiv-1 Nef Protein In Complex With R96i Mutant Fyn Sh3
Domain
Length = 59
Score = 53.5 bits (127), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
VALY ++AI DLS KG ++++++ ++ WW+ + G GYIPSNYV
Sbjct: 4 VALYDYEAITEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 54
Score = 38.5 bits (88), Expect = 0.010, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 25/36 (69%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
VALY ++AI DLS KG ++++++ ++ WW+ +
Sbjct: 4 VALYDYEAITEDDLSFHKGEKFQILNSSEGDWWEAR 39
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 417 AGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA---MMKEGTMSE--DDFIE 471
+ D +I +L + E++G+G FG V R +W GS DVA +M++ +E ++F+
Sbjct: 25 GAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGS-DVAVKILMEQDFHAERVNEFLR 83
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
E +M RL+H N+V G ++ + IVT+
Sbjct: 84 EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRV 245
+VL + KSDV+++GV++WE+ T + P+G L +VV V
Sbjct: 209 EVLRDEPSNEKSDVYSFGVILWELATL-QQPWGNLNPAQVVAAV 251
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 417 AGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA---MMKEGTMSE--DDFIE 471
+ D +I +L + E++G+G FG V R +W GS DVA +M++ +E ++F+
Sbjct: 25 GAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGS-DVAVKILMEQDFHAERVNEFLR 83
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
E +M RL+H N+V G ++ + IVT+
Sbjct: 84 EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRV 245
+VL + KSDV+++GV++WE+ T + P+G L +VV V
Sbjct: 209 EVLRDEPSNEKSDVYSFGVILWELATL-QQPWGNLNPAQVVAAV 251
>pdb|2HDA|A Chain A, Yes Sh3 Domain
Length = 64
Score = 52.4 bits (124), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
+ VALY ++A DLS +KG ++++++T+ WW+ + G GYIPSNYV
Sbjct: 7 IFVALYDYEARTTEDLSFKKGERFQIINNTEGDWWEARSIATGKNGYIPSNYV 59
Score = 38.9 bits (89), Expect = 0.007, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD----KNG 115
+ VALY ++A DLS +KG ++++++T+ WW+ + KNG
Sbjct: 7 IFVALYDYEARTTEDLSFKKGERFQIINNTEGDWWEARSIATGKNG 52
>pdb|2YT6|A Chain A, Solution Structure Of The Sh3_1 Domain Of Yamaguchi
Sarcoma Viral (V-Yes) Oncogene Homolog 1
Length = 109
Score = 52.0 bits (123), Expect = 7e-07, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
+ VALY ++A DLS +KG ++++++T+ WW+ + G GYIPSNYV
Sbjct: 29 IFVALYDYEARTTEDLSFKKGERFQIINNTEGDWWEARSIATGKSGYIPSNYV 81
Score = 37.7 bits (86), Expect = 0.015, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 26/38 (68%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
+ VALY ++A DLS +KG ++++++T+ WW+ +
Sbjct: 29 IFVALYDYEARTTEDLSFKKGERFQIINNTEGDWWEAR 66
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 192 VNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIIL 251
+ + LE IH Y +F+ +SDVW+YGV +WE+ T G PY + E+ D +++G L
Sbjct: 183 IKWMALECIH----YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERL 238
Query: 252 EKP 254
+P
Sbjct: 239 PQP 241
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M HG LL Y+ H++ +G LLL+ C+Q+ KGM YLE +HR+
Sbjct: 98 MPHGCLLEYVHEHKDNIGSQ--LLLNWCVQIAKGMMYLEERRLVHRD 142
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-------RGSIDVAMMKE--GTMSEDDFIEEAKVMTRL 479
EL ++ LGSG FG V +G W + + + ++ E G + +F++EA +M +
Sbjct: 15 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 74
Query: 480 QHQNLVQLYGVC 491
H +LV+L GVC
Sbjct: 75 DHPHLVRLLGVC 86
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSE-DDFIEEAKVMTRLQHQNL 484
ID E+ + E +G G FGVV + KWR DVA+ + + SE FI E + ++R+ H N+
Sbjct: 5 IDYKEIEVEEVVGRGAFGVVCKAKWRAK-DVAIKQIESESERKAFIVELRQLSRVNHPNI 63
Query: 485 VQLYGVC 491
V+LYG C
Sbjct: 64 VKLYGAC 70
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFT 227
+V + +S K DV+++G+++WEV T
Sbjct: 173 EVFEGSNYSEKCDVFSWGIILWEVIT 198
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 195 LTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ LE IH Y +F+ +SDVW+YGV +WE+ T G PY + E+ D +++G L +P
Sbjct: 209 MALECIH----YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQP 264
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M HG LL Y+ H++ +G LLL+ C+Q+ KGM YLE +HR+
Sbjct: 121 MPHGCLLEYVHEHKDNIGSQ--LLLNWCVQIAKGMMYLEERRLVHRD 165
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-------RGSIDVAMMKE--GTMSEDDFIEEAKVMTRL 479
EL ++ LGSG FG V +G W + + + ++ E G + +F++EA +M +
Sbjct: 38 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 97
Query: 480 QHQNLVQLYGVC 491
H +LV+L GVC
Sbjct: 98 DHPHLVRLLGVC 109
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSE-DDFIEEAKVMTRLQHQNL 484
ID E+ + E +G G FGVV + KWR DVA+ + + SE FI E + ++R+ H N+
Sbjct: 6 IDYKEIEVEEVVGRGAFGVVCKAKWRAK-DVAIKQIESESERKAFIVELRQLSRVNHPNI 64
Query: 485 VQLYGVC 491
V+LYG C
Sbjct: 65 VKLYGAC 71
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFT 227
+V + +S K DV+++G+++WEV T
Sbjct: 174 EVFEGSNYSEKCDVFSWGIILWEVIT 199
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK---AWY 258
+ + Y +FS SD+W+YGV++WEVF+ G PY N +VV+ ++ +L P AW
Sbjct: 217 EAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWV 276
Query: 259 VGDM 262
M
Sbjct: 277 YALM 280
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMK---EGTMSEDDFIEEA 473
EI + + +EELG +FG V +G G ++ + +K EG + E+ F EA
Sbjct: 22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREE-FRHEA 80
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
+ RLQH N+V L GV +K +P+ ++ S
Sbjct: 81 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCS 112
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK---AWY 258
+ + Y +FS SD+W+YGV++WEVF+ G PY N +VV+ ++ +L P AW
Sbjct: 200 EAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWV 259
Query: 259 VGDM 262
M
Sbjct: 260 YALM 263
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMK---EGTMSEDDFIEEA 473
EI + + +EELG +FG V +G G ++ + +K EG + E+ F EA
Sbjct: 5 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREE-FRHEA 63
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
+ RLQH N+V L GV +K +P+ ++ S
Sbjct: 64 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCS 95
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 35/53 (66%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + + +F+S SD W+YG++MWEV + G+ PY + N +V++ +++ L P
Sbjct: 193 EAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPP 245
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRGS------IDVAMMKEGTMSED--DFIEEAKVM 476
EID + + + E +G+G+FG V RG+ + + + +K G +F+ EA +M
Sbjct: 12 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIM 71
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
+ +H N+++L GV + P+ I+T+
Sbjct: 72 GQFEHPNIIRLEGVVTNSMPVMILTE 97
>pdb|1WLP|B Chain B, Solution Structure Of The P22phox-P47phox Complex
Length = 138
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 61/121 (50%), Gaps = 18/121 (14%)
Query: 77 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW--KVKDKNG---------IRKPDQMIRP 125
A+ ++ G +++L G EV++ ++ WW ++K K G + PD+ P
Sbjct: 15 AIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETEDP 74
Query: 126 KV------VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
+ VA+ + A+EG ++SL +G EV+ + WW ++ K+ GY PS Y++
Sbjct: 75 EPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIR-KDDVTGYFPSMYLQ 133
Query: 180 E 180
+
Sbjct: 134 K 134
Score = 30.0 bits (66), Expect = 3.0, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
VA+ + A+EG ++SL +G EV+ + WW ++
Sbjct: 84 VAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIR 119
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 35/53 (66%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + + +F+S SD W+YG++MWEV + G+ PY + N +V++ +++ L P
Sbjct: 191 EAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPP 243
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRGS------IDVAMMKEGTMSED--DFIEEAKVM 476
EID + + + E +G+G+FG V RG+ + + + +K G +F+ EA +M
Sbjct: 10 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIM 69
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
+ +H N+++L GV + P+ I+T+
Sbjct: 70 GQFEHPNIIRLEGVVTNSMPVMILTE 95
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFI---EEAKVMTRLQ 480
WEI+ +E+ML +GSG FG V +GKW G + V ++K + + F E V+ + +
Sbjct: 31 WEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTR 90
Query: 481 HQNLVQLYGVCSKHRPIYIVT 501
H N++ G +K + IVT
Sbjct: 91 HVNILLFMGYMTKDN-LAIVT 110
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 185 GLQKYDDVNGLTLELIHQVL---NYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-TE 240
G Q+ + G L + +V+ + FS +SDV++YG++++E+ T G++PY + N +
Sbjct: 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMT-GELPYSHINNRDQ 245
Query: 241 VVDRVQRG 248
++ V RG
Sbjct: 246 IIFMVGRG 253
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 24 LLDMCIQVCKGMAYLERHNYIHRETKKS 51
L+D+ Q +GM YL N IHR+ K +
Sbjct: 134 LIDIARQTAQGMDYLHAKNIIHRDMKSN 161
>pdb|3H0F|A Chain A, Crystal Structure Of The Human Fyn Sh3 R96w Mutant
Length = 73
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
VALY ++A DLS KG ++++++ ++ WW+ + G GYIPSNYV
Sbjct: 19 VALYDYEAWTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 69
Score = 35.8 bits (81), Expect = 0.063, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 24/36 (66%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
VALY ++A DLS KG ++++++ ++ WW+ +
Sbjct: 19 VALYDYEAWTEDDLSFHKGEKFQILNSSEGDWWEAR 54
>pdb|4AG2|C Chain C, Human Chymase - Fynomer Complex
pdb|4AG2|D Chain D, Human Chymase - Fynomer Complex
Length = 84
Score = 50.4 bits (119), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
VALY + A DLS KG +++++D WW+ + G GYIPSNYV
Sbjct: 10 VALYDYNATRWTDLSFHKGEKFQILDGDSGDWWEARSLTTGETGYIPSNYV 60
Score = 35.4 bits (80), Expect = 0.070, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
VALY + A DLS KG +++++D WW+ +
Sbjct: 10 VALYDYNATRWTDLSFHKGEKFQILDGDSGDWWEAR 45
>pdb|3UA6|A Chain A, Crystal Structure Of The Human Fyn Sh3 Domain
pdb|3UA6|B Chain B, Crystal Structure Of The Human Fyn Sh3 Domain
pdb|3UA7|A Chain A, Crystal Structure Of The Human Fyn Sh3 Domain In Complex
With A Peptide From The Hepatitis C Virus Ns5a-protein
pdb|3UA7|B Chain B, Crystal Structure Of The Human Fyn Sh3 Domain In Complex
With A Peptide From The Hepatitis C Virus Ns5a-protein
pdb|3UA7|C Chain C, Crystal Structure Of The Human Fyn Sh3 Domain In Complex
With A Peptide From The Hepatitis C Virus Ns5a-protein
pdb|3UA7|D Chain D, Crystal Structure Of The Human Fyn Sh3 Domain In Complex
With A Peptide From The Hepatitis C Virus Ns5a-protein
Length = 64
Score = 50.4 bits (119), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
VALY ++A DLS KG ++++++ ++ WW+ + G GYIPSNYV
Sbjct: 9 VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 59
Score = 35.4 bits (80), Expect = 0.078, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 24/36 (66%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
VALY ++A DLS KG ++++++ ++ WW+ +
Sbjct: 9 VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEAR 44
>pdb|1FYN|A Chain A, Phosphotransferase
Length = 62
Score = 50.4 bits (119), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
VALY ++A DLS KG ++++++ ++ WW+ + G GYIPSNYV
Sbjct: 8 VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 58
Score = 35.4 bits (80), Expect = 0.080, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 24/36 (66%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
VALY ++A DLS KG ++++++ ++ WW+ +
Sbjct: 8 VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEAR 43
>pdb|1M27|C Chain C, Crystal Structure Of SapFYNSH3SLAM TERNARY COMPLEX
Length = 61
Score = 50.4 bits (119), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
VALY ++A DLS KG ++++++ ++ WW+ + G GYIPSNYV
Sbjct: 5 VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 55
Score = 35.4 bits (80), Expect = 0.080, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 24/36 (66%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
VALY ++A DLS KG ++++++ ++ WW+ +
Sbjct: 5 VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEAR 40
>pdb|1A0N|B Chain B, Nmr Study Of The Sh3 Domain From Fyn Proto-Oncogene
Tyrosine Kinase Complexed With The Synthetic Peptide P2l
Corresponding To Residues 91-104 Of The P85 Subunit Of
Pi3- Kinase, Family Of 25 Structures
Length = 69
Score = 50.4 bits (119), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
VALY ++A DLS KG ++++++ ++ WW+ + G GYIPSNYV
Sbjct: 9 VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 59
Score = 35.4 bits (80), Expect = 0.081, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 24/36 (66%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
VALY ++A DLS KG ++++++ ++ WW+ +
Sbjct: 9 VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEAR 44
>pdb|1AZG|B Chain B, Nmr Study Of The Sh3 Domain From Fyn Proto-Oncogene
Tyrosine Kinase Kinase Complexed With The Synthetic
Peptide P2l Corresponding To Residues 91-104 Of The P85
Subunit Of Pi3-Kinase, Minimized Average (Probmap)
Structure
pdb|1NYF|A Chain A, Nmr Study Of The Sh3 Domain From Fyn Proto-Oncogene
Tyrosine Kinase, Minimized Average (Probmap) Structure
pdb|1NYG|A Chain A, Nmr Study Of The Sh3 Domain From Fyn Proto-Oncogene
Tyrosine Kinase, Family Of 20 Structures
Length = 67
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
VALY ++A DLS KG ++++++ ++ WW+ + G GYIPSNYV
Sbjct: 7 VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 57
Score = 35.4 bits (80), Expect = 0.082, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 24/36 (66%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
VALY ++A DLS KG ++++++ ++ WW+ +
Sbjct: 7 VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEAR 42
>pdb|3NHN|A Chain A, Crystal Structure Of The Src-Family Kinase Hck
Sh3-Sh2-Linker Regulatory Region
Length = 193
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 336 GCFVVRNS-STKGLYTLSLYTKVPH--PHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
G F++R+S +TKG Y+LS+ P VKHY I+ G F++S + ++ E+V++
Sbjct: 95 GSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDH 154
Query: 393 HRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAEL 431
++ + GL +L VP + WE D EL
Sbjct: 155 YKKGNDGLCQKLS-------VPCMSSKPQKPWEKDAWEL 186
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKEKELLG 185
+VVALY ++AI DLS +KG + V++++ E WWK + GYIPSNYV + L
Sbjct: 11 IVVALYDYEAIHHEDLSFQKGDQMVVLEESGE-WWKARSLATRKEGYIPSNYVARVDSLE 69
Query: 186 LQKY 189
+++
Sbjct: 70 TEEW 73
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 257 WYVGDMSRQRAE-SILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPH--PHVKHYHIKQN 312
W+ +SR+ AE +L + G F++R+S +TKG Y+LS+ P VKHY I+
Sbjct: 73 WFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTL 132
Query: 313 SRGEFFLSEKHCCHSIPEVKD 333
G F++S + ++ E+ D
Sbjct: 133 DNGGFYISPRSTFSTLQELVD 153
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
+VVALY ++AI DLS +KG + V++++ E WWK +
Sbjct: 11 IVVALYDYEAIHHEDLSFQKGDQMVVLEESGE-WWKAR 47
>pdb|1SHF|A Chain A, Crystal Structure Of The Sh3 Domain In Human Fyn;
Comparison Of The Three-Dimensional Structures Of Sh3
Domains In Tyrosine Kinases And Spectrin
pdb|1SHF|B Chain B, Crystal Structure Of The Sh3 Domain In Human Fyn;
Comparison Of The Three-Dimensional Structures Of Sh3
Domains In Tyrosine Kinases And Spectrin
pdb|1ZBJ|A Chain A, Inferential Structure Determination Of The Fyn Sh3 Domain
Using Noesy Data From A 15n,H2 Enriched Protein
Length = 59
Score = 50.1 bits (118), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
VALY ++A DLS KG ++++++ ++ WW+ + G GYIPSNYV
Sbjct: 5 VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 55
Score = 35.4 bits (80), Expect = 0.084, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 24/36 (66%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
VALY ++A DLS KG ++++++ ++ WW+ +
Sbjct: 5 VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEAR 40
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 408 PCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRG-----KWRG---SIDVAMM 459
P V A L KWE L+L + LG G+FG V + K R ++ V M+
Sbjct: 2 PLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML 61
Query: 460 KEGTMSED--DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
KE + D + E V+ ++ H ++++LYG CS+ P+ ++ + + +
Sbjct: 62 KENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKY 110
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++++SDVW++GVL+WE+ T G PY + + + ++ G +E+P
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERP 274
>pdb|4D8D|A Chain A, Crystal Structure Of Hiv-1 Nef Fyn-sh3 R96w Variant
pdb|4D8D|C Chain C, Crystal Structure Of Hiv-1 Nef Fyn-sh3 R96w Variant
Length = 58
Score = 50.1 bits (118), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
VALY ++A DLS KG ++++++ ++ WW+ + G GYIPSNYV
Sbjct: 5 VALYDYEAWTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 55
Score = 35.4 bits (80), Expect = 0.081, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 24/36 (66%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
VALY ++A DLS KG ++++++ ++ WW+ +
Sbjct: 5 VALYDYEAWTEDDLSFHKGEKFQILNSSEGDWWEAR 40
>pdb|1AVZ|C Chain C, V-1 Nef Protein In Complex With Wild Type Fyn Sh3 Domain
Length = 57
Score = 50.1 bits (118), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
VALY ++A DLS KG ++++++ ++ WW+ + G GYIPSNYV
Sbjct: 4 VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 54
Score = 35.0 bits (79), Expect = 0.087, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 24/36 (66%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
VALY ++A DLS KG ++++++ ++ WW+ +
Sbjct: 4 VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEAR 39
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 408 PCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRG-----KWRG---SIDVAMM 459
P V A L KWE L+L + LG G+FG V + K R ++ V M+
Sbjct: 2 PLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML 61
Query: 460 KEGTMSED--DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
KE + D + E V+ ++ H ++++LYG CS+ P+ ++ + + +
Sbjct: 62 KENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKY 110
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++++SDVW++GVL+WE+ T G PY + + + ++ G +E+P
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERP 274
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
F++ SDVW++GV++WE+ T + PY L N +V+ V G +L+KP
Sbjct: 239 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 284
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--------------DVAMMKEGTMSED 467
D+WE+ ++ + ELG G FG+V G +G + + A M+E
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---- 95
Query: 468 DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
+F+ EA VM ++V+L GV S+ +P ++ +
Sbjct: 96 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 130
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------LLDMCIQVCKGMAYLERHNYIHRE 47
M G L +YLR + N L ++ M ++ GMAYL + ++HR+
Sbjct: 132 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 185
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
F++ SDVW++GV++WE+ T + PY L N +V+ V G +L+KP
Sbjct: 217 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 262
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--------------DVAMMKEGTMSED 467
D+WE+ ++ + ELG G FG+V G +G + + A M+E
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---- 73
Query: 468 DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
+F+ EA VM ++V+L GV S+ +P ++ +
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 108
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------LLDMCIQVCKGMAYLERHNYIHRE 47
M G L +YLR + N L ++ M ++ GMAYL + ++HR+
Sbjct: 110 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 163
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
F++ SDVW++GV++WE+ T + PY L N +V+ V G +L+KP
Sbjct: 207 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 252
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--------------DVAMMKEGTMSED 467
D+WE+ ++ + ELG G FG+V G +G + + A M+E
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---- 63
Query: 468 DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
+F+ EA VM ++V+L GV S+ +P ++ +
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 98
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------LLDMCIQVCKGMAYLERHNYIHRE 47
M G L +YLR + N L ++ M ++ GMAYL + ++HR+
Sbjct: 100 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 153
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 408 PCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRG-----KWRG---SIDVAMM 459
P V A L KWE L+L + LG G+FG V + K R ++ V M+
Sbjct: 2 PLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML 61
Query: 460 KEGTMSED--DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
KE + D + E V+ ++ H ++++LYG CS+ P+ ++ + + +
Sbjct: 62 KENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKY 110
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++++SDVW++GVL+WE+ T G PY + + + ++ G +E+P
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERP 274
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
F++ SDVW++GV++WE+ T + PY L N +V+ V G +L+KP
Sbjct: 217 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 262
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--------------DVAMMKEGTMSED 467
D+WE+ ++ + ELG G FG+V G +G + + A M+E
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---- 73
Query: 468 DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
+F+ EA VM ++V+L GV S+ +P ++ +
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 108
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------LLDMCIQVCKGMAYLERHNYIHRE 47
M G L +YLR + N L ++ M ++ GMAYL + ++HR+
Sbjct: 110 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 163
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
F++ SDVW++GV++WE+ T + PY L N +V+ V G +L+KP
Sbjct: 210 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 255
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--------------DVAMMKEGTMSED 467
D+WE+ ++ + ELG G FG+V G +G + + A M+E
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---- 66
Query: 468 DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
+F+ EA VM ++V+L GV S+ +P ++ +
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 101
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------LLDMCIQVCKGMAYLERHNYIHRE 47
M G L +YLR + N L ++ M ++ GMAYL + ++HR+
Sbjct: 103 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 156
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
F++ SDVW++GV++WE+ T + PY L N +V+ V G +L+KP
Sbjct: 211 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 256
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--------------DVAMMKEGTMSED 467
D+WE+ ++ + ELG G FG+V G +G + + A M+E
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---- 67
Query: 468 DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
+F+ EA VM ++V+L GV S+ +P ++ +
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 102
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------LLDMCIQVCKGMAYLERHNYIHRE 47
M G L +YLR + N L ++ M ++ GMAYL + ++HR+
Sbjct: 104 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 157
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
F++ SDVW++GV++WE+ T + PY L N +V+ V G +L+KP
Sbjct: 208 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 253
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--------------DVAMMKEGTMSED 467
D+WE+ ++ + ELG G FG+V G +G + + A M+E
Sbjct: 9 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---- 64
Query: 468 DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
+F+ EA VM ++V+L GV S+ +P ++ +
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 99
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------LLDMCIQVCKGMAYLERHNYIHRE 47
M G L +YLR + N L ++ M ++ GMAYL + ++HR+
Sbjct: 101 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 154
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
F++ SDVW++GV++WE+ T + PY L N +V+ V G +L+KP
Sbjct: 204 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 249
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--------------DVAMMKEGTMSED 467
D+WE+ ++ + ELG G FG+V G +G + + A M+E
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---- 60
Query: 468 DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
+F+ EA VM ++V+L GV S+ +P ++ +
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 95
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------LLDMCIQVCKGMAYLERHNYIHRE 47
M G L +YLR + N L ++ M ++ GMAYL + ++HR+
Sbjct: 97 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 150
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
F++ SDVW++GV++WE+ T + PY L N +V+ V G +L+KP
Sbjct: 202 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 247
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--------------DVAMMKEGTMSED 467
D+WE+ ++ + ELG G FG+V G +G + + A M+E
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---- 58
Query: 468 DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
+F+ EA VM ++V+L GV S+ +P ++ +
Sbjct: 59 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 93
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------LLDMCIQVCKGMAYLERHNYIHRE 47
M G L +YLR + N L ++ M ++ GMAYL + ++HR+
Sbjct: 95 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 148
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
F++ SDVW++GV++WE+ T + PY L N +V+ V G +L+KP
Sbjct: 211 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 256
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--------------DVAMMKEGTMSED 467
D+WE+ ++ + ELG G FG+V G +G + + A M+E
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---- 67
Query: 468 DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
+F+ EA VM ++V+L GV S+ +P ++ +
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 102
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------LLDMCIQVCKGMAYLERHNYIHRE 47
M G L +YLR + N L ++ M ++ GMAYL + ++HR+
Sbjct: 104 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 157
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
F++ SDVW++GV++WE+ T + PY L N +V+ V G +L+KP
Sbjct: 204 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 249
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 18/99 (18%)
Query: 418 GLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--------------DVAMMKEGT 463
G D+WE+ ++ + ELG G FG+V G +G + + A M+E
Sbjct: 1 GSVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 464 MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
+F+ EA VM ++V+L GV S+ +P ++ +
Sbjct: 61 ----EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 95
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------LLDMCIQVCKGMAYLERHNYIHRE 47
M G L +YLR + N L ++ M ++ GMAYL + ++HR+
Sbjct: 97 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 150
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
F++ SDVW++GV++WE+ T + PY L N +V+ V G +L+KP
Sbjct: 210 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 255
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--------------DVAMMKEGTMSED 467
D+WE+ ++ + ELG G FG+V G +G + + A M+E
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---- 66
Query: 468 DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
+F+ EA VM ++V+L GV S+ +P ++ +
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 101
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------LLDMCIQVCKGMAYLERHNYIHRE 47
M G L +YLR + N L ++ M ++ GMAYL + ++HR+
Sbjct: 103 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 156
>pdb|3UF4|A Chain A, Crystal Structure Of A Sh3 And Sh2 Domains Of Fyn Protein
(Proto- Concogene Tyrosine-Protein Kinase Fyn) From Mus
Musculus At 1.98 A Resolution
Length = 164
Score = 50.1 bits (118), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
VALY ++A DLS KG ++++++ ++ WW+ + G GYIPSNYV
Sbjct: 8 VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 58
Score = 46.2 bits (108), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 20/125 (16%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGD 261
Q+LN SS+ D W L T G+ Y VD +Q + WY G
Sbjct: 30 QILN----SSEGDWWEARSL-----TTGETGYIPSNYVAPVDSIQ-------AEEWYFGK 73
Query: 262 MSRQRAE-SILKQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEF 317
+ R+ AE +L + G F++R S +TKG Y+LS+ + HVKHY I++ G +
Sbjct: 74 LGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDXKGDHVKHYKIRKLDNGGY 133
Query: 318 FLSEK 322
+++ +
Sbjct: 134 YITTR 138
Score = 39.3 bits (90), Expect = 0.005, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 333 DKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEV 389
+ G F++R S +TKG Y+LS+ + HVKHY I++ G ++++ + ++ ++
Sbjct: 88 NPRGTFLIRESETTKGAYSLSIRDWDDXKGDHVKHYKIRKLDNGGYYITTRAQFETLQQL 147
Query: 390 VNYHRHNSGGLASRL 404
V ++ + GL L
Sbjct: 148 VQHYSEKADGLCFNL 162
Score = 35.0 bits (79), Expect = 0.097, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 24/36 (66%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
VALY ++A DLS KG ++++++ ++ WW+ +
Sbjct: 8 VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEAR 43
>pdb|1U5S|A Chain A, Nmr Structure Of The Complex Between Nck-2 Sh3 Domain And
Pinch-1 Lim4 Domain
Length = 71
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMD--DTQEHWWKVKDKNGSVGYIPSNYV 178
VV LYPF ++ +L+ EKG EV++ + WWK K+ G VG +P NYV
Sbjct: 8 VVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYV 61
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVMD--DTQEHWWKVKDKNG 115
VV LYPF ++ +L+ EKG EV++ + WWK K+ G
Sbjct: 8 VVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARG 51
>pdb|1G83|A Chain A, Crystal Structure Of Fyn Sh3-Sh2
pdb|1G83|B Chain B, Crystal Structure Of Fyn Sh3-Sh2
Length = 165
Score = 49.7 bits (117), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
VALY ++A DLS KG ++++++ ++ WW+ + G GYIPSNYV
Sbjct: 7 VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 57
Score = 47.0 bits (110), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 20/125 (16%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGD 261
Q+LN SS+ D W L T G+ Y VD +Q + WY G
Sbjct: 29 QILN----SSEGDWWEARSL-----TTGETGYIPSNYVAPVDSIQ-------AEEWYFGK 72
Query: 262 MSRQRAE-SILKQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEF 317
+ R+ AE +L + G F++R S +TKG Y+LS+ + + HVKHY I++ G +
Sbjct: 73 LGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGY 132
Query: 318 FLSEK 322
+++ +
Sbjct: 133 YITTR 137
Score = 46.2 bits (108), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 333 DKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEV 389
+ G F++R S +TKG Y+LS+ + + HVKHY I++ G ++++ + ++ ++
Sbjct: 87 NPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQL 146
Query: 390 VNYHRHNSGGLASRL 404
V ++ + GL+SRL
Sbjct: 147 VQHYSERAAGLSSRL 161
Score = 35.0 bits (79), Expect = 0.100, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 24/36 (66%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
VALY ++A DLS KG ++++++ ++ WW+ +
Sbjct: 7 VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEAR 42
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 414 PATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVA 457
P AG+S KWE +L L + LG G FG V + G ++ V
Sbjct: 14 PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 458 MMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
M+K+ ED D + E ++M + +H+N++ L G C++ P+Y++ + +S
Sbjct: 74 MLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW++GVLMWE+FT G PY + E+ ++ G ++KP
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 281
>pdb|2FRY|A Chain A, Solution Structure Of The Third Sh3 Domain Of Human Nck2
Adaptor Protein
Length = 61
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMD--DTQEHWWKVKDKNGSVGYIPSNYV 178
VV LYPF ++ +L+ EKG EV++ + WWK K+ G VG +P NYV
Sbjct: 4 VVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYV 57
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVMD--DTQEHWWKVKDKNG 115
VV LYPF ++ +L+ EKG EV++ + WWK K+ G
Sbjct: 4 VVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARG 47
>pdb|1WX6|A Chain A, Solution Structure Of The Sh3 Domain Of The Human
Cytoplasmic Protein Nck2
Length = 91
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMD--DTQEHWWKVKDKNGSVGYIPSNYV 178
VV LYPF ++ +L+ EKG EV++ + WWK K+ G VG +P NYV
Sbjct: 19 VVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYV 72
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVMD--DTQEHWWKVKDKNG 115
VV LYPF ++ +L+ EKG EV++ + WWK K+ G
Sbjct: 19 VVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARG 62
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
++SKSDVWA+GV MWE+ T G PY ++N E+ D + G L++P+
Sbjct: 226 YTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPE 272
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWR----GSIDVAM--MKEGTMSE---DDFIEEAKVM 476
ID L+L + LG G+FG V G + S+ VA+ MK S+ ++F+ EA M
Sbjct: 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACM 90
Query: 477 TRLQHQNLVQLYGVC 491
H N+++L GVC
Sbjct: 91 KDFSHPNVIRLLGVC 105
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVM 476
S D WEI ++ + + +GSG FG V +GKW G + V M+ + F E V+
Sbjct: 1 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 60
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
+ +H N++ G +K + + IVT
Sbjct: 61 RKTRHVNILLFMGYSTKPQ-LAIVT 84
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 58/103 (56%), Gaps = 8/103 (7%)
Query: 185 GLQKYDDVNGLTLELIHQVL---NYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-TE 240
G +++ ++G L + +V+ + +S +SDV+A+G++++E+ T G++PY + N +
Sbjct: 161 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 219
Query: 241 VVDRVQRGII---LEKPKAWYVGDMSRQRAESILKQEDKEGCF 280
++ V RG + L K ++ M R AE + K+ D+ F
Sbjct: 220 IIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLF 262
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVM 476
S D WEI ++ + + +GSG FG V +GKW G + V M+ + F E V+
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
+ +H N++ G +K + + IVT
Sbjct: 64 RKTRHVNILLFMGYSTKPQ-LAIVT 87
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 58/103 (56%), Gaps = 8/103 (7%)
Query: 185 GLQKYDDVNGLTLELIHQVL---NYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-TE 240
G +++ ++G L + +V+ + +S +SDV+A+G++++E+ T G++PY + N +
Sbjct: 164 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 222
Query: 241 VVDRVQRGII---LEKPKAWYVGDMSRQRAESILKQEDKEGCF 280
++ V RG + L K ++ M R AE + K+ D+ F
Sbjct: 223 IIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLF 265
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVM 476
S D WEI ++ + + +GSG FG V +GKW G + V M+ + F E V+
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
+ +H N++ G +K + + IVT
Sbjct: 64 RKTRHVNILLFMGYSTKPQ-LAIVT 87
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 58/103 (56%), Gaps = 8/103 (7%)
Query: 185 GLQKYDDVNGLTLELIHQVL---NYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-TE 240
G +++ ++G L + +V+ + +S +SDV+A+G++++E+ T G++PY + N +
Sbjct: 164 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 222
Query: 241 VVDRVQRGII---LEKPKAWYVGDMSRQRAESILKQEDKEGCF 280
++ V RG + L K ++ M R AE + K+ D+ F
Sbjct: 223 IIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLF 265
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVM 476
S D WEI ++ + + +GSG FG V +GKW G + V M+ + F E V+
Sbjct: 19 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 78
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
+ +H N++ G +K + + IVT
Sbjct: 79 RKTRHVNILLFMGYSTKPQ-LAIVT 102
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 58/103 (56%), Gaps = 8/103 (7%)
Query: 185 GLQKYDDVNGLTLELIHQVL---NYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-TE 240
G +++ ++G L + +V+ + +S +SDV+A+G++++E+ T G++PY + N +
Sbjct: 179 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 237
Query: 241 VVDRVQRGII---LEKPKAWYVGDMSRQRAESILKQEDKEGCF 280
++ V RG + L K ++ M R AE + K+ D+ F
Sbjct: 238 IIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLF 280
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVM 476
S D WEI ++ + + +GSG FG V +GKW G + V M+ + F E V+
Sbjct: 3 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 62
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
+ +H N++ G +K + + IVT
Sbjct: 63 RKTRHVNILLFMGYSTKPQ-LAIVT 86
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 59/103 (57%), Gaps = 8/103 (7%)
Query: 185 GLQKYDDVNGLTLELIHQVL---NYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-TE 240
G +++ ++G L + +V+ + +S +SDV+A+G++++E+ T G++PY + N +
Sbjct: 163 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 221
Query: 241 VVDRVQRGII---LEKPKAWYVGDMSRQRAESILKQEDKEGCF 280
+++ V RG + L K ++ M R AE + K+ D+ F
Sbjct: 222 IIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSF 264
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVM 476
S D WEI ++ + + +GSG FG V +GKW G + V M+ + F E V+
Sbjct: 15 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
+ +H N++ G +K + + IVT
Sbjct: 75 RKTRHVNILLFMGYSTKPQ-LAIVT 98
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 59/103 (57%), Gaps = 8/103 (7%)
Query: 185 GLQKYDDVNGLTLELIHQVL---NYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-TE 240
G +++ ++G L + +V+ + +S +SDV+A+G++++E+ T G++PY + N +
Sbjct: 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 233
Query: 241 VVDRVQRGII---LEKPKAWYVGDMSRQRAESILKQEDKEGCF 280
+++ V RG + L K ++ M R AE + K+ D+ F
Sbjct: 234 IIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSF 276
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVM 476
S D WEI ++ + + +GSG FG V +GKW G + V M+ + F E V+
Sbjct: 27 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 86
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
+ +H N++ G +K + + IVT
Sbjct: 87 RKTRHVNILLFMGYSTKPQ-LAIVT 110
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 58/103 (56%), Gaps = 8/103 (7%)
Query: 185 GLQKYDDVNGLTLELIHQVL---NYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-TE 240
G +++ ++G L + +V+ + +S +SDV+A+G++++E+ T G++PY + N +
Sbjct: 187 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 245
Query: 241 VVDRVQRGII---LEKPKAWYVGDMSRQRAESILKQEDKEGCF 280
++ V RG + L K ++ M R AE + K+ D+ F
Sbjct: 246 IIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLF 288
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVM 476
S D WEI ++ + + +GSG FG V +GKW G + V M+ + F E V+
Sbjct: 27 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 86
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
+ +H N++ G +K + + IVT
Sbjct: 87 RKTRHVNILLFMGYSTKPQ-LAIVT 110
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 58/103 (56%), Gaps = 8/103 (7%)
Query: 185 GLQKYDDVNGLTLELIHQVL---NYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-TE 240
G +++ ++G L + +V+ + +S +SDV+A+G++++E+ T G++PY + N +
Sbjct: 187 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 245
Query: 241 VVDRVQRGII---LEKPKAWYVGDMSRQRAESILKQEDKEGCF 280
++ V RG + L K ++ M R AE + K+ D+ F
Sbjct: 246 IIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLF 288
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVM 476
S D WEI ++ + + +GSG FG V +GKW G + V M+ + F E V+
Sbjct: 26 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 85
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
+ +H N++ G +K + + IVT
Sbjct: 86 RKTRHVNILLFMGYSTKPQ-LAIVT 109
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 58/103 (56%), Gaps = 8/103 (7%)
Query: 185 GLQKYDDVNGLTLELIHQVL---NYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-TE 240
G +++ ++G L + +V+ + +S +SDV+A+G++++E+ T G++PY + N +
Sbjct: 186 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 244
Query: 241 VVDRVQRGII---LEKPKAWYVGDMSRQRAESILKQEDKEGCF 280
++ V RG + L K ++ M R AE + K+ D+ F
Sbjct: 245 IIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLF 287
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKPK 255
+S+KSDVW+YGVL+WE+F+ G PY G + + R++ G+ + P+
Sbjct: 278 YSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRMRAPE 325
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIEE 472
KWE L L + LG G FG V + G ++ V M+KEG + + + E
Sbjct: 21 KWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTE 80
Query: 473 AKVMTRLQHQ-NLVQLYGVCSKH-RPIYIVTD 502
K++T + H N+V L G C+K P+ ++ +
Sbjct: 81 LKILTHIGHHLNVVNLLGACTKQGGPLMVIVE 112
>pdb|1UEC|A Chain A, Crystal Structure Of Autoinhibited Form Of Tandem Sh3
Domain Of P47phox
Length = 193
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 61/121 (50%), Gaps = 18/121 (14%)
Query: 77 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW--KVKDKNG---------IRKPDQMIRP 125
A+ ++ G +++L G EV++ ++ WW ++K K G + PD+ P
Sbjct: 16 AIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETEDP 75
Query: 126 KV------VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
+ VA+ + A+EG ++SL +G EV+ + WW ++ K+ GY PS Y++
Sbjct: 76 EPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIR-KDDVTGYFPSMYLQ 134
Query: 180 E 180
+
Sbjct: 135 K 135
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
VA+ + A+EG ++SL +G EV+ + WW ++
Sbjct: 85 VAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIR 120
>pdb|1NG2|A Chain A, Structure Of Autoinhibited P47phox
Length = 193
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 61/121 (50%), Gaps = 18/121 (14%)
Query: 77 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW--KVKDKNG---------IRKPDQMIRP 125
A+ ++ G +++L G EV++ ++ WW ++K K G + PD+ P
Sbjct: 16 AIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETEDP 75
Query: 126 KV------VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
+ VA+ + A+EG ++SL +G EV+ + WW ++ K+ GY PS Y++
Sbjct: 76 EPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIR-KDDVTGYFPSMYLQ 134
Query: 180 E 180
+
Sbjct: 135 K 135
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
VA+ + A+EG ++SL +G EV+ + WW ++
Sbjct: 85 VAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIR 120
>pdb|1AOT|F Chain F, Nmr Structure Of The Fyn Sh2 Domain Complexed With A
Phosphotyrosyl Peptide, Minimized Average Structure
pdb|1AOU|F Chain F, Nmr Structure Of The Fyn Sh2 Domain Complexed With A
Phosphotyrosyl Peptide, 22 Structures
Length = 106
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 319 LSEKHCCHSIPEVKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEF 375
L K + + G F++R S +TKG Y+LS+ + + HVKHY I++ G +
Sbjct: 12 LGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGY 71
Query: 376 FLSEKHCCHSIPEVVNYHRHNSGGLASRL 404
+++ + ++ ++V ++ + GL+SRL
Sbjct: 72 YITTRAQFETLQQLVQHYSERAAGLSSRL 100
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 253 KPKAWYVGDMSRQRAE-SILKQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYH 308
+ + WY G + R+ AE +L + G F++R S +TKG Y+LS+ + + HVKHY
Sbjct: 3 QAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYK 62
Query: 309 IKQNSRGEFFLSEKHCCHSIPEV 331
I++ G ++++ + ++ ++
Sbjct: 63 IRKLDNGGYYITTRAQFETLQQL 85
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 17/94 (18%)
Query: 208 RFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP------------K 255
RF+ +SDVW+YGV +WE+ T G PY + E+ D +++G L +P K
Sbjct: 197 RFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVK 256
Query: 256 AWYVGDMSRQRAESILKQ-----EDKEGCFVVRN 284
W + R R ++ + D + V++N
Sbjct: 257 CWMIDSECRPRFRELVSEFSRMARDPQRFVVIQN 290
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M +G LL+++R + LG LL+ C+Q+ KGM+YLE +HR+
Sbjct: 100 MPYGCLLDHVRENRGRLGSQD--LLNWCMQIAKGMSYLEDVRLVHRD 144
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-------RGSIDVAMMKEGTM--SEDDFIEEAKVMTRL 479
EL ++ LGSG FG V +G W + + + +++E T + + ++EA VM +
Sbjct: 17 TELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV 76
Query: 480 QHQNLVQLYGVC 491
+ +L G+C
Sbjct: 77 GSPYVSRLLGIC 88
>pdb|3QWY|A Chain A, Ced-2
pdb|3QWY|B Chain B, Ced-2
Length = 308
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
+VVV + F DL E+G E++ T + WW+ ++ G+ G +P+NYV+
Sbjct: 148 EVVVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQ 201
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
+VVV + F DL E+G E++ T + WW+ ++ G
Sbjct: 148 EVVVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALG 190
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 255 KAWYVGDMSRQRAESILKQEDKE-GCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNS 313
+++Y MSR+ A +L + G F++R+SS G Y+L++ V HY I+
Sbjct: 41 RSFYFPGMSREEAHKLLGEPQVSIGTFLMRDSSRPGEYSLTVREADEGNAVCHYLIE--- 97
Query: 314 RGE 316
RGE
Sbjct: 98 RGE 100
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 414 PATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVA 457
P AG+S KWE +L L + LG G FG V + G ++ V
Sbjct: 14 PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 458 MMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
M+K+ +D D + E ++M + +H+N++ L G C++ P+Y++ + +S
Sbjct: 74 MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW++GVLMWE+FT G PY + E+ ++ G ++KP
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 281
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 414 PATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVA 457
P AG+S KWE +L L + LG G FG V + G ++ V
Sbjct: 14 PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 458 MMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
M+K+ +D D + E ++M + +H+N++ L G C++ P+Y++ + +S
Sbjct: 74 MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW++GVLMWE+FT G PY + E+ ++ G ++KP
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 281
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 414 PATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVA 457
P AG+S KWE +L L + LG G FG V + G ++ V
Sbjct: 14 PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 458 MMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
M+K+ +D D + E ++M + +H+N++ L G C++ P+Y++ + +S
Sbjct: 74 MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW++GVLMWE+FT G PY + E+ ++ G ++KP
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 281
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 414 PATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVA 457
P AG+S KWE +L L + LG G FG V + G ++ V
Sbjct: 14 PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 458 MMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
M+K+ +D D + E ++M + +H+N++ L G C++ P+Y++ + +S
Sbjct: 74 MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW++GVLMWE+FT G PY + E+ ++ G ++KP
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 281
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 414 PATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVA 457
P AG+S KWE +L L + LG G FG V + G ++ V
Sbjct: 14 PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 458 MMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
M+K+ +D D + E ++M + +H+N++ L G C++ P+Y++ + +S
Sbjct: 74 MLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYAS 124
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW++GVLMWE+FT G PY + E+ ++ G ++KP
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 281
>pdb|3QWX|X Chain X, Ced-2 1-174
Length = 174
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
+VVV + F DL E+G E++ T + WW+ ++ G+ G +P+NYV+
Sbjct: 119 EVVVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQ 172
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
+VVV + F DL E+G E++ T + WW+ ++ G
Sbjct: 119 EVVVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALG 161
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 255 KAWYVGDMSRQRAESILKQEDKE-GCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNS 313
+++Y MSR+ A +L + G F++R+SS G Y+L++ V HY I+
Sbjct: 12 RSFYFPGMSREEAHKLLGEPQVSIGTFLMRDSSRPGEYSLTVREADEGNAVCHYLIE--- 68
Query: 314 RGE 316
RGE
Sbjct: 69 RGE 71
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 414 PATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVA 457
P AG+S KWE +L L + LG G FG V + G ++ V
Sbjct: 14 PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 458 MMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
M+K+ +D D + E ++M + +H+N++ L G C++ P+Y++ + +S
Sbjct: 74 MLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYAS 124
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW++GVLMWE+FT G PY + E+ ++ G ++KP
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 281
>pdb|1A1A|A Chain A, C-Src (Sh2 Domain With C188a Mutation) Complexed With
Ace-Formyl Phosphotyr-Glu-(N,N-Dipentyl Amine)
pdb|1A1A|B Chain B, C-Src (Sh2 Domain With C188a Mutation) Complexed With
Ace-Formyl Phosphotyr-Glu-(N,N-Dipentyl Amine)
Length = 107
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 253 KPKAWYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYH 308
+ + WY G ++R+ +E +L E+ G F+VR S +TKG Y+LS+ + +VKHY
Sbjct: 5 QAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYSLSVSDFDNAKGLNVKHYK 64
Query: 309 IKQNSRGEFFLSEKHCCHSIPEV 331
I++ G F+++ + +S+ ++
Sbjct: 65 IRKLDSGGFYITSRTQFNSLQQL 87
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 331 VKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIP 387
++ G F+VR S +TKG Y+LS+ + +VKHY I++ G F+++ + +S+
Sbjct: 26 AENPRGTFLVRESETTKGAYSLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQ 85
Query: 388 EVVNYHRHNSGGLASRLKT 406
++V Y+ ++ GL RL T
Sbjct: 86 QLVAYYSKHADGLCHRLTT 104
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVMTR 478
D WEI ++ + + +GSG FG V +GKW G + V M+ + F E V+ +
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 479 LQHQNLVQLYGVCSKHRPIYIVT 501
+H N++ G +K + + IVT
Sbjct: 61 TRHVNILLFMGYSTKPQ-LAIVT 82
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 58/103 (56%), Gaps = 8/103 (7%)
Query: 185 GLQKYDDVNGLTLELIHQVL---NYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-TE 240
G +++ ++G L + +V+ + +S +SDV+A+G++++E+ T G++PY + N +
Sbjct: 159 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 217
Query: 241 VVDRVQRGII---LEKPKAWYVGDMSRQRAESILKQEDKEGCF 280
++ V RG + L K ++ M R AE + K+ D+ F
Sbjct: 218 IIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLF 260
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVMTR 478
D WEI ++ + + +GSG FG V +GKW G + V M+ + F E V+ +
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 479 LQHQNLVQLYGVCSKHRPIYIVT 501
+H N++ G +K + + IVT
Sbjct: 61 TRHVNILLFMGYSTKPQ-LAIVT 82
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 58/103 (56%), Gaps = 8/103 (7%)
Query: 185 GLQKYDDVNGLTLELIHQVL---NYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-TE 240
G +++ ++G L + +V+ + +S +SDV+A+G++++E+ T G++PY + N +
Sbjct: 159 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 217
Query: 241 VVDRVQRGII---LEKPKAWYVGDMSRQRAESILKQEDKEGCF 280
++ V RG + L K ++ M R AE + K+ D+ F
Sbjct: 218 IIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLF 260
>pdb|2DLY|A Chain A, Solution Structure Of The Sh2 Domain Of Murine Fyn-Related
Kinase
Length = 121
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 320 SEKHCCHSIPEVKDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLS 378
+EK +S +++ G F++R S S KG ++LS+ + VKHY I++ G FFL+
Sbjct: 28 AEKQLLYS----ENQTGAFLIRESESQKGDFSLSV---LDEGVVKHYRIRRLDEGGFFLT 80
Query: 379 EKHCCHSIPEVVNYHRHNSGGLASRLKTSPC 409
+ ++ E VNY+ S GL +L+ PC
Sbjct: 81 RRKVFSTLNEFVNYYTTTSDGLCVKLE-KPC 110
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 253 KPKAWYVGDMSRQRAE-SILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIK 310
+ + W+ G + R AE +L E++ G F++R S S KG ++LS+ + VKHY I+
Sbjct: 14 QAEPWFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSV---LDEGVVKHYRIR 70
Query: 311 QNSRGEFFLSEKHCCHSIPE 330
+ G FFL+ + ++ E
Sbjct: 71 RLDEGGFFLTRRKVFSTLNE 90
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 19/112 (16%)
Query: 413 VPATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDV 456
P AG+S KWE +L L + LG G FG V + G ++ V
Sbjct: 59 TPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAV 118
Query: 457 AMMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
M+K+ +D D + E ++M + +H+N++ L G C++ P+Y++ + +S
Sbjct: 119 KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 170
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW++GVLMWE+FT G PY + E+ ++ G ++KP
Sbjct: 282 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 327
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ SDVWA+GV MWE+ T G+ PY ++N E+ + + G L++P
Sbjct: 216 YTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQP 261
Score = 32.0 bits (71), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 1 MRHGSLLNYL---RRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M+HG L +L R EN + L+ + + GM YL N+IHR+
Sbjct: 113 MKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRD 162
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L RF++KSDVW++GVL+WE+ T G PY + ++ + +G L +P+
Sbjct: 200 LQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPE 251
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M HG LL ++R + V L+ +QV +GM YL ++HR+
Sbjct: 105 MCHGDLLQFIRSPQRN--PTVKDLISFGLQVARGMEYLAEQKFVHRD 149
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Query: 437 LGSGQFGVVRRGKW----RGSIDVAMMKEGTMSE----DDFIEEAKVMTRLQHQNLVQLY 488
+G G FGVV G++ + I A+ ++E + F+ E +M L H N++ L
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 489 GV 490
G+
Sbjct: 89 GI 90
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 414 PATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVA 457
P AG+S KWE +L L + LG G FG V + G ++ V
Sbjct: 1 PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK 60
Query: 458 MMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
M+K+ +D D + E ++M + +H+N++ L G C++ P+Y++ + +S
Sbjct: 61 MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 111
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW++GVLMWE+FT G PY + E+ ++ G ++KP
Sbjct: 223 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 268
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID--------VAMMKEGTMSED--DFIE 471
D+WE+ ++ LL ELG G FG+V G R I V + E + +F+
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
EA VM ++V+L GV SK +P +V +
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVME 100
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
F++ SD+W++GV++WE+ + + PY L N +V+ V G L++P
Sbjct: 209 FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP 254
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------LLDMCIQVCKGMAYLERHNYIHR 46
M HG L +YLR N G ++ M ++ GMAYL ++HR
Sbjct: 102 MAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 154
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 414 PATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVA 457
P AG+S KWE +L L + LG G FG V + G ++ V
Sbjct: 3 PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK 62
Query: 458 MMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
M+K+ +D D + E ++M + +H+N++ L G C++ P+Y++ + +S
Sbjct: 63 MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 113
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW++GVLMWE+FT G PY + E+ ++ G ++KP
Sbjct: 225 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 270
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 19/112 (16%)
Query: 413 VPATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDV 456
P AG+S KWE +L L + LG G FG V + G ++ V
Sbjct: 5 TPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAV 64
Query: 457 AMMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
M+K+ +D D + E ++M + +H+N++ L G C++ P+Y++ + +S
Sbjct: 65 KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 116
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW++GVLMWE+FT G PY + E+ ++ G ++KP
Sbjct: 228 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 273
>pdb|4AFZ|C Chain C, Human Chymase - Fynomer Complex
pdb|4AFZ|D Chain D, Human Chymase - Fynomer Complex
pdb|4AG1|C Chain C, Human Chymase - Fynomer Complex
Length = 84
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
VALY + A DLS KG ++++++ WW+ + G GYIPSNYV
Sbjct: 10 VALYDYNATRWTDLSFHKGEKFQILEFGPGDWWEARSLTTGETGYIPSNYV 60
Score = 32.3 bits (72), Expect = 0.71, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
VALY + A DLS KG ++++++ WW+ +
Sbjct: 10 VALYDYNATRWTDLSFHKGEKFQILEFGPGDWWEAR 45
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID--------VAMMKEGTMSED--DFIE 471
D+WE+ ++ LL ELG G FG+V G R I V + E + +F+
Sbjct: 11 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 70
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
EA VM ++V+L GV SK +P +V +
Sbjct: 71 EASVMKGFTCHHVVRLLGVVSKGQPTLVVME 101
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
F++ SD+W++GV++WE+ + + PY L N +V+ V G L++P
Sbjct: 210 FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP 255
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------LLDMCIQVCKGMAYLERHNYIHR 46
M HG L +YLR N G ++ M ++ GMAYL ++HR
Sbjct: 103 MAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 155
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID--------VAMMKEGTMSED--DFIE 471
D+WE+ ++ LL ELG G FG+V G R I V + E + +F+
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
EA VM ++V+L GV SK +P +V +
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVME 100
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
F++ SD+W++GV++WE+ + + PY L N +V+ V G L++P
Sbjct: 209 FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP 254
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------LLDMCIQVCKGMAYLERHNYIHRE 47
M HG L +YLR N G ++ M ++ GMAYL ++HR+
Sbjct: 102 MAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRD 155
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW++GVLMWE+FT G PY + E+ ++ G ++KP
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 281
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 19/111 (17%)
Query: 414 PATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVA 457
P AG+S KWE +L L + LG G FG V + G ++ V
Sbjct: 14 PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 458 MMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
M+K+ +D D + E ++M + +H+N++ L G C++ P+Y++ +S
Sbjct: 74 MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYAS 124
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW++GVLMWE+FT G PY + E+ ++ G ++KP
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 281
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 19/111 (17%)
Query: 414 PATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVA 457
P AG+S KWE +L L + LG G FG V + G ++ V
Sbjct: 14 PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 458 MMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
M+K+ +D D + E ++M + +H+N++ L G C++ P+Y++ +S
Sbjct: 74 MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYAS 124
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID--------VAMMKEGTMSED--DFIE 471
D+WE+ ++ LL ELG G FG+V G R I V + E + +F+
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
EA VM ++V+L GV SK +P +V +
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVME 100
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
F++ SD+W++GV++WE+ + + PY L N +V+ V G L++P
Sbjct: 209 FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP 254
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------LLDMCIQVCKGMAYLERHNYIHRE 47
M HG L +YLR N G ++ M ++ GMAYL ++HR+
Sbjct: 102 MAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRD 155
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID--------VAMMKEGTMSED--DFIE 471
D+WE+ ++ LL ELG G FG+V G R I V + E + +F+
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
EA VM ++V+L GV SK +P +V +
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVME 100
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
F++ SD+W++GV++WE+ + + PY L N +V+ V G L++P
Sbjct: 209 FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP 254
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------LLDMCIQVCKGMAYLERHNYIHRE 47
M HG L +YLR N G ++ M ++ GMAYL ++HR+
Sbjct: 102 MAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRD 155
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID--------VAMMKEGTMSED--DFIE 471
D+WE+ ++ LL ELG G FG+V G R I V + E + +F+
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
EA VM ++V+L GV SK +P +V +
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVME 100
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
F++ SD+W++GV++WE+ + + PY L N +V+ V G L++P
Sbjct: 209 FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP 254
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------LLDMCIQVCKGMAYLERHNYIHRE 47
M HG L +YLR N G ++ M ++ GMAYL ++HR+
Sbjct: 102 MAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRD 155
>pdb|1X2Q|A Chain A, Solution Structure Of The Sh3 Domain Of The Signal
Transducing Adaptor Molecule 2
Length = 88
Score = 47.0 bits (110), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
V ALY F+A+E +L+ + G V+DD+ +WWK ++ G +G PSN+V
Sbjct: 20 VRALYDFEAVEDNELTFKHGEIIIVLDDSDANWWKGENHRG-IGLFPSNFV 69
Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGI 116
V ALY F+A+E +L+ + G V+DD+ +WWK ++ GI
Sbjct: 20 VRALYDFEAVEDNELTFKHGEIIIVLDDSDANWWKGENHRGI 61
>pdb|1PRL|C Chain C, Two Binding Orientations For Peptides To Src Sh3 Domain:
Development Of A General Model For Sh3-Ligand
Interactions
pdb|1PRM|C Chain C, Two Binding Orientations For Peptides To Src Sh3 Domain:
Development Of A General Model For Sh3-Ligand
Interactions
pdb|1RLP|C Chain C, Two Binding Orientations For Peptides To Src Sh3 Domain:
Development Of A General Model For Sh3-Ligand
Interactions
pdb|1RLQ|C Chain C, Two Binding Orientations For Peptides To Src Sh3 Domain:
Development Of A General Model For Sh3-Ligand
Interactions
pdb|1SRL|A Chain A, 1h And 15n Assignments And Secondary Structure Of The Src
Sh3 Domain
pdb|1SRM|A Chain A, 1h And 15n Assignments And Secondary Structure Of The Src
Sh3 Domain
Length = 64
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
VALY +++ DLS +KG +++++T+ WW G GYIPSNYV
Sbjct: 11 VALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLTTGQTGYIPSNYV 61
Score = 33.1 bits (74), Expect = 0.38, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW 108
VALY +++ DLS +KG +++++T+ WW
Sbjct: 11 VALYDYESRTETDLSFKKGERLQIVNNTEGDWW 43
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID--------VAMMKEGTMSED--DFIE 471
D+WE+ ++ LL ELG G FG+V G R I V + E + +F+
Sbjct: 7 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 66
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
EA VM ++V+L GV SK +P +V +
Sbjct: 67 EASVMKGFTCHHVVRLLGVVSKGQPTLVVME 97
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
F++ SD+W++GV++WE+ + + PY L N +V+ V G L++P
Sbjct: 206 FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP 251
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------LLDMCIQVCKGMAYLERHNYIHRE 47
M HG L +YLR N G ++ M ++ GMAYL ++HR+
Sbjct: 99 MAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRD 152
>pdb|1BKL|A Chain A, Self-Associated Apo Src Sh2 Domain
Length = 113
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 257 WYVGDMSRQRAES-ILKQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQN 312
WY G ++R+ +ES +L E+ G F+VR S +TKG Y LS+ + +VKHY I++
Sbjct: 6 WYFGKITRRESESLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 65
Query: 313 SRGEFFLSEK 322
G F+++ +
Sbjct: 66 DSGGFYITSR 75
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 332 KDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
++ G F+VR S +TKG Y LS+ + +VKHY I++ G F+++ + S+ +
Sbjct: 24 ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQQ 83
Query: 389 VVNYHRHNSGGLASRLKTSPC 409
+V Y+ ++ GL RL T+ C
Sbjct: 84 LVAYYSKHADGLCHRL-TNVC 103
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVA--MMKEGTMSED--DFIEE 472
KWE L + LGSG FG V G SI VA M+KE S + + E
Sbjct: 39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSE 98
Query: 473 AKVMTRL-QHQNLVQLYGVCSKHRPIYIVTD 502
K+MT+L H+N+V L G C+ PIY++ +
Sbjct: 99 LKMMTQLGSHENIVNLLGACTLSGPIYLIFE 129
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKP 254
++ KSDVW+YG+L+WE+F+ G PY G + +Q G +++P
Sbjct: 251 YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQP 297
>pdb|4HCK|A Chain A, Human Hck Sh3 Domain, Nmr, 25 Structures
pdb|5HCK|A Chain A, Human Hck Sh3 Domain, Nmr, Minimized Average Structure
Length = 72
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
+VVALY ++AI DLS +KG + V++++ E WWK + GYIPSNYV
Sbjct: 11 IVVALYDYEAIHHEDLSFQKGDQMVVLEESGE-WWKARSLATRKEGYIPSNYV 62
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
+VVALY ++AI DLS +KG + V++++ E WWK +
Sbjct: 11 IVVALYDYEAIHHEDLSFQKGDQMVVLEESGE-WWKAR 47
>pdb|1BU1|A Chain A, Src Family Kinase Hck Sh3 Domain
pdb|1BU1|B Chain B, Src Family Kinase Hck Sh3 Domain
pdb|1BU1|E Chain E, Src Family Kinase Hck Sh3 Domain
pdb|1BU1|C Chain C, Src Family Kinase Hck Sh3 Domain
pdb|1BU1|D Chain D, Src Family Kinase Hck Sh3 Domain
pdb|1BU1|F Chain F, Src Family Kinase Hck Sh3 Domain
Length = 57
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
+VVALY ++AI DLS +KG + V++++ E WWK + GYIPSNYV
Sbjct: 2 IVVALYDYEAIHHEDLSFQKGDQMVVLEESGE-WWKARSLATRKEGYIPSNYV 53
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
+VVALY ++AI DLS +KG + V++++ E WWK +
Sbjct: 2 IVVALYDYEAIHHEDLSFQKGDQMVVLEESGE-WWKAR 38
>pdb|1OV3|A Chain A, Structure Of The P22phox-P47phox Complex
pdb|1OV3|B Chain B, Structure Of The P22phox-P47phox Complex
Length = 138
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 18/120 (15%)
Query: 77 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW--KVKDKNG---------IRKPDQMIRP 125
A+ ++ G +++L G EV++ ++ WW ++K K G + PD+ P
Sbjct: 16 AIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETEDP 75
Query: 126 KV------VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
+ VA+ + A+EG ++SL +G EV+ + WW ++ K+ GY PS Y++
Sbjct: 76 EPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIR-KDDVTGYFPSMYLQ 134
>pdb|1O4C|A Chain A, Crystal Structure Of Sh2 In Complex With Phosphate.
pdb|1O4F|A Chain A, Crystal Structure Of Sh2 In Complex With Ru79073.
pdb|1O4G|A Chain A, Crystal Structure Of Sh2 In Complex With Dpi59
Length = 108
Score = 46.6 bits (109), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 253 KPKAWYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYH 308
+ + WY G ++R+ +E +L E+ G F+VR S +TKG Y LS+ + +VKHY
Sbjct: 3 QAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYXLSVSDFDNAKGLNVKHYK 62
Query: 309 IKQNSRGEFFLSEKHCCHSIPEV 331
I++ G F+++ + +S+ ++
Sbjct: 63 IRKLDSGGFYITSRTQFNSLQQL 85
Score = 45.8 bits (107), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 332 KDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
++ G F+VR S +TKG Y LS+ + +VKHY I++ G F+++ + +S+ +
Sbjct: 25 ENPRGTFLVRESETTKGAYXLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQ 84
Query: 389 VVNYHRHNSGGLASRLKT 406
+V Y+ ++ GL RL T
Sbjct: 85 LVAYYSKHADGLCHRLTT 102
>pdb|1SHD|A Chain A, Peptide Inhibitors Of Src Sh3-Sh2-Phosphoprotein
Interactions
pdb|1HCT|B Chain B, Nmr Structure Of The Human Src Sh2 Domain Complex
pdb|1HCS|B Chain B, Nmr Structure Of The Human Src Sh2 Domain Complex
pdb|1A07|A Chain A, C-Src (Sh2 Domain) Complexed With Ace-Malonyl
Tyr-Glu-(N,N- Dipentyl Amine)
pdb|1A07|B Chain B, C-Src (Sh2 Domain) Complexed With Ace-Malonyl
Tyr-Glu-(N,N- Dipentyl Amine)
pdb|1A08|A Chain A, C-Src (Sh2 Domain) Complexed With Ace-Difluoro Phosphotyr-
Glu-(N,N-Dipentyl Amine)
pdb|1A08|B Chain B, C-Src (Sh2 Domain) Complexed With Ace-Difluoro Phosphotyr-
Glu-(N,N-Dipentyl Amine)
pdb|1A09|A Chain A, C-Src (Sh2 Domain) Complexed With Ace-Formyl
Phosphotyr-Glu- (N,N-Dipentyl Amine)
pdb|1A09|B Chain B, C-Src (Sh2 Domain) Complexed With Ace-Formyl
Phosphotyr-Glu- (N,N-Dipentyl Amine)
pdb|1A1B|A Chain A, C-Src (Sh2 Domain) Complexed With Ace-Phosphotyr-Glu-(N,N-
Dipentyl Amine)
pdb|1A1B|B Chain B, C-Src (Sh2 Domain) Complexed With Ace-Phosphotyr-Glu-(N,N-
Dipentyl Amine)
pdb|1A1C|A Chain A, C-Src (Sh2 Domain) Complexed With
Ace-Phosphotyr-Glu-(N-Me(- (Ch2)3-Cyclopentyl))
pdb|1A1C|B Chain B, C-Src (Sh2 Domain) Complexed With
Ace-Phosphotyr-Glu-(N-Me(- (Ch2)3-Cyclopentyl))
pdb|1A1E|A Chain A, C-Src (Sh2 Domain) Complexed With Ace-Phosphotyr-Glu-(3-
Butylpiperidine)
pdb|1A1E|B Chain B, C-Src (Sh2 Domain) Complexed With Ace-Phosphotyr-Glu-(3-
Butylpiperidine)
Length = 107
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 253 KPKAWYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYH 308
+ + WY G ++R+ +E +L E+ G F+VR S +TKG Y LS+ + +VKHY
Sbjct: 5 QAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYK 64
Query: 309 IKQNSRGEFFLSEKHCCHSIPEV 331
I++ G F+++ + +S+ ++
Sbjct: 65 IRKLDSGGFYITSRTQFNSLQQL 87
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 331 VKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIP 387
++ G F+VR S +TKG Y LS+ + +VKHY I++ G F+++ + +S+
Sbjct: 26 AENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQ 85
Query: 388 EVVNYHRHNSGGLASRLKT 406
++V Y+ ++ GL RL T
Sbjct: 86 QLVAYYSKHADGLCHRLTT 104
>pdb|4HXJ|A Chain A, Crystal Structure Of Sh3:rgt Complex
pdb|4HXJ|B Chain B, Crystal Structure Of Sh3:rgt Complex
Length = 60
Score = 46.6 bits (109), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
VALY +++ DLS +KG +++++T+ WW G GYIPSNYV
Sbjct: 6 VALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYV 56
Score = 32.7 bits (73), Expect = 0.51, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW 108
VALY +++ DLS +KG +++++T+ WW
Sbjct: 6 VALYDYESRTETDLSFKKGERLQIVNNTEGDWW 38
>pdb|2OI3|A Chain A, Nmr Structure Analysis Of The Hematopoetic Cell Kinase Sh3
Domain Complexed With An Artificial High Affinity Ligand
(Pd1)
pdb|2OJ2|A Chain A, Nmr Structure Analysis Of The Hematopoetic Cell Kinase Sh3
Domain Complexed With An Artificial High Affinity Ligand
(Pd1)
Length = 86
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKEKELL 184
+VVALY ++AI DLS +KG + V++++ E WWK + GYIPSNYV + L
Sbjct: 27 IVVALYDYEAIHHEDLSFQKGDQMVVLEESGE-WWKARSLATRKEGYIPSNYVARVDSL 84
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
+VVALY ++AI DLS +KG + V++++ E WWK +
Sbjct: 27 IVVALYDYEAIHHEDLSFQKGDQMVVLEESGE-WWKAR 63
>pdb|1O41|A Chain A, Crystal Structure Of Sh2 In Complex With Ru78300.
pdb|1O42|A Chain A, Crystal Structure Of Sh2 In Complex With Ru81843.
pdb|1O43|A Chain A, Crystal Structure Of Sh2 In Complex With Ru82129.
pdb|1O44|A Chain A, Crystal Structure Of Sh2 In Complex With Ru85052
pdb|1O45|A Chain A, Crystal Structure Of Sh2 In Complex With Ru84687.
pdb|1O46|A Chain A, Crystal Structure Of Sh2 In Complex With Ru90395.
pdb|1O47|A Chain A, Crystal Structure Of Sh2 In Complex With Ru82209.
pdb|1O48|A Chain A, Crystal Structure Of Sh2 In Complex With Ru85053.
pdb|1O49|A Chain A, Crystal Structure Of Sh2 In Complex With Ru85493.
pdb|1O4A|A Chain A, Crystal Structure Of Sh2 In Complex With Ru82197.
pdb|1O4B|A Chain A, Crystal Structure Of Sh2 In Complex With Ru83876.
pdb|1O4D|A Chain A, Crystal Structure Of Sh2 In Complex With Ru78262.
pdb|1O4E|A Chain A, Crystal Structure Of Sh2 In Complex With Ru78299.
pdb|1O4H|A Chain A, Crystal Structure Of Sh2 In Complex With Ru79072.
pdb|1O4I|A Chain A, Crystal Structure Of Sh2 In Complex With Pas219.
pdb|1O4J|A Chain A, Crystal Structure Of Sh2 In Complex With Iso24.
pdb|1O4K|A Chain A, Crystal Structure Of Sh2 In Complex With Pasbn.
pdb|1O4L|A Chain A, Crystal Structure Of Sh2 In Complex With Fragment2.
pdb|1O4M|A Chain A, Crystal Structure Of Sh2 In Complex With Malonicacid.
pdb|1O4N|A Chain A, Crystal Structure Of Sh2 In Complex With Oxalic Acid.
pdb|1O4O|A Chain A, Crystal Structure Of Sh2 In Complex With Phenylphosphate.
pdb|1O4P|A Chain A, Crystal Structure Of Sh2 In Complex With Ru78791.
pdb|1O4Q|A Chain A, Crystal Structure Of Sh2 In Complex With Ru79256.
pdb|1O4R|A Chain A, Crystal Structure Of Sh2 In Complex With Ru78783
Length = 108
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 253 KPKAWYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYH 308
+ + WY G ++R+ +E +L E+ G F+VR S +TKG Y LS+ + +VKHY
Sbjct: 3 QAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYK 62
Query: 309 IKQNSRGEFFLSEKHCCHSIPEV 331
I++ G F+++ + +S+ ++
Sbjct: 63 IRKLDSGGFYITSRTQFNSLQQL 85
Score = 45.4 bits (106), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 332 KDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
++ G F+VR S +TKG Y LS+ + +VKHY I++ G F+++ + +S+ +
Sbjct: 25 ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQ 84
Query: 389 VVNYHRHNSGGLASRLKT 406
+V Y+ ++ GL RL T
Sbjct: 85 LVAYYSKHADGLCHRLTT 102
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFI--------EEAKVM 476
EID AEL L E +G G FG V R W G D +K D+ I +EAK+
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRAFWIG--DEVAVKAARHDPDEDISQTIENVRQEAKLF 60
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
L+H N++ L GVC K + +V +
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVME 86
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPY 233
+V+ + FS SDVW+YGVL+WE+ T G++P+
Sbjct: 184 EVIRASMFSKGSDVWSYGVLLWELLT-GEVPF 214
>pdb|3HCK|A Chain A, Nmr Ensemble Of The Uncomplexed Human Hck Sh2 Domain, 20
Structures
Length = 107
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 336 GCFVVRNS-STKGLYTLSLYTKVPH--PHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
G F++R+S +TKG Y+LS+ P VKHY I+ G F++S + ++ E+V++
Sbjct: 28 GSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDH 87
Query: 393 HRHNSGGLASRLKTSPC 409
++ + GL +L PC
Sbjct: 88 YKKGNDGLCQKLSV-PC 103
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 257 WYVGDMSRQRAE-SILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPH--PHVKHYHIKQN 312
W+ +SR+ AE +L + G F++R+S +TKG Y+LS+ P VKHY I+
Sbjct: 6 WFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTL 65
Query: 313 SRGEFFLSEKHCCHSIPEVKD 333
G F++S + ++ E+ D
Sbjct: 66 DNGGFYISPRSTFSTLQELVD 86
>pdb|1W1F|A Chain A, Sh3 Domain Of Human Lyn Tyrosine Kinase
pdb|1WA7|A Chain A, Sh3 Domain Of Human Lyn Tyrosine Kinase In Complex With A
Herpesviral Ligand
Length = 65
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
+VVALYP+ I DLS +KG + +V+++ E WWK K G+IPSNYV
Sbjct: 9 IVVALYPYDGIHPDDLSFKKGEKMKVLEEHGE-WWKAKSLLTKKEGFIPSNYV 60
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
+VVALYP+ I DLS +KG + +V+++ E WWK K
Sbjct: 9 IVVALYPYDGIHPDDLSFKKGEKMKVLEEHGE-WWKAK 45
>pdb|4AFQ|C Chain C, Human Chymase - Fynomer Complex
pdb|4AFQ|D Chain D, Human Chymase - Fynomer Complex
pdb|4AFS|C Chain C, Human Chymase - Fynomer Complex
pdb|4AFU|C Chain C, Human Chymase - Fynomer Complex
pdb|4AFU|D Chain D, Human Chymase - Fynomer Complex
Length = 85
Score = 46.2 bits (108), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQE-HWWKVKD-KNGSVGYIPSNYV 178
VALY ++A DLS KG +++++D + WW+ + G GYIPSNYV
Sbjct: 10 VALYDYQADRWTDLSFHKGEKFQILDASPPGDWWEARSLTTGETGYIPSNYV 61
Score = 31.2 bits (69), Expect = 1.4, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQE-HWWKVK 111
VALY ++A DLS KG +++++D + WW+ +
Sbjct: 10 VALYDYQADRWTDLSFHKGEKFQILDASPPGDWWEAR 46
>pdb|1QWE|A Chain A, C-Src Sh3 Domain Complexed With Ligand App12
pdb|1QWF|A Chain A, C-Src Sh3 Domain Complexed With Ligand Vsl12
pdb|1NLO|C Chain C, Structure Of Signal Transduction Protein, Nmr, Minimized
Average Structure
pdb|1NLP|C Chain C, Structure Of Signal Transduction Protein, Nmr, Minimized
Average Structure
Length = 64
Score = 46.2 bits (108), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
VALY +++ DLS +KG +++++T+ WW G GYIPSNYV
Sbjct: 11 VALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLTTGQTGYIPSNYV 61
Score = 32.7 bits (73), Expect = 0.53, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW 108
VALY +++ DLS +KG +++++T+ WW
Sbjct: 11 VALYDYESRTETDLSFKKGERLQIVNNTEGDWW 43
>pdb|4F59|A Chain A, Triple Mutant Src Sh2 Domain
pdb|4F5A|A Chain A, Triple Mutant Src Sh2 Domain Bound To Phosphate Ion
pdb|4F5B|A Chain A, Triple Mutant Src Sh2 Domain Bound To Phosphotyrosine
Length = 112
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 253 KPKAWYVGDMSRQRAESIL-KQEDKEGCFVVRNSST-KGLYTLSL--YTKVPHPHVKHYH 308
+ + WY G ++R+ +E +L E+ G F+VR S T KG Y LS+ + +VKHY
Sbjct: 7 QAEEWYFGKITRRESERLLLNAENPRGTFLVRESETVKGAYALSVSDFDNAKGLNVKHYL 66
Query: 309 IKQNSRGEFFLSEKHCCHSIPEV 331
I++ G F+++ + +S+ ++
Sbjct: 67 IRKLDSGGFYITSRTQFNSLQQL 89
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 331 VKDKEGCFVVRNSST-KGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIP 387
++ G F+VR S T KG Y LS+ + +VKHY I++ G F+++ + +S+
Sbjct: 28 AENPRGTFLVRESETVKGAYALSVSDFDNAKGLNVKHYLIRKLDSGGFYITSRTQFNSLQ 87
Query: 388 EVVNYHRHNSGGLASRLKT 406
++V Y+ ++ GL RL T
Sbjct: 88 QLVAYYSKHADGLCHRLTT 106
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 98 MPFGXLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 142
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 241
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ LGSG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 75 DNPHVCRLLGIC 86
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 123 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 167
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 221 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 266
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ LGSG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 100 DNPHVCRLLGIC 111
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 99 MPFGXLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 143
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 197 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 242
Score = 35.0 bits (79), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ LGSG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 76 DNPHVCRLLGIC 87
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 98 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 142
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 241
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ L SG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 75 DNPHVCRLLGIC 86
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVAMMKEGTMSED--DFI 470
+WE+ L+L + LG G FG V + G + V M+K +D D I
Sbjct: 63 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 122
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
E ++M + +H+N++ L G C++ P+Y++ + +S
Sbjct: 123 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 158
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW++GVL+WE+FT G PY + E+ ++ G ++KP
Sbjct: 270 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP 315
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVAMMKEGTMSED--DFI 470
+WE+ L+L + LG G FG V + G + V M+K +D D I
Sbjct: 15 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 74
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
E ++M + +H+N++ L G C++ P+Y++ + +S
Sbjct: 75 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 110
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW++GVL+WE+FT G PY + E+ ++ G ++KP
Sbjct: 222 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP 267
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 102 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 146
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 200 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 245
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ LGSG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 79 DNPHVCRLLGIC 90
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 98 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 142
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 241
Score = 35.0 bits (79), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ LGSG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 75 DNPHVCRLLGIC 86
>pdb|1BKM|A Chain A, Cocrystal Structure Of D-Amino Acid Substituted
Phosphopeptide Complex
Length = 113
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 257 WYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQN 312
WY G ++R+ +E++L E+ G F+VR S +TKG Y LS+ + +VKHY I++
Sbjct: 6 WYFGKITRRESEALLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 65
Query: 313 SRGEFFLSEK 322
G F+++ +
Sbjct: 66 DSGGFYITSR 75
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 332 KDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
++ G F+VR S +TKG Y LS+ + +VKHY I++ G F+++ + S+ +
Sbjct: 24 ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQQ 83
Query: 389 VVNYHRHNSGGLASRLKTSPC 409
+V Y+ ++ GL RL T+ C
Sbjct: 84 LVAYYSKHADGLCHRL-TNVC 103
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 108 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 152
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 206 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 251
Score = 35.0 bits (79), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ LGSG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 85 DNPHVCRLLGIC 96
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVAMMKEGTMSED--DFI 470
+WE+ L+L + LG G FG V + G + V M+K +D D I
Sbjct: 11 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 70
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
E ++M + +H+N++ L G C++ P+Y++ + +S
Sbjct: 71 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 106
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW++GVL+WE+FT G PY + E+ ++ G ++KP
Sbjct: 218 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP 263
>pdb|3FJ5|A Chain A, Crystal Structure Of The C-Src-Sh3 Domain
pdb|3FJ5|B Chain B, Crystal Structure Of The C-Src-Sh3 Domain
Length = 57
Score = 45.8 bits (107), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
VALY +++ DLS +KG +++++T+ WW G GYIPSNYV
Sbjct: 4 VALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLTTGRTGYIPSNYV 54
Score = 32.7 bits (73), Expect = 0.52, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW 108
VALY +++ DLS +KG +++++T+ WW
Sbjct: 4 VALYDYESRTETDLSFKKGERLQIVNNTEGDWW 36
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 92 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 136
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 190 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 235
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ LGSG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 69 DNPHVCRLLGIC 80
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVAMMKEGTMSED--DFI 470
+WE+ L+L + LG G FG V + G + V M+K +D D I
Sbjct: 7 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 66
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
E ++M + +H+N++ L G C++ P+Y++ + +S
Sbjct: 67 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 102
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW++GVL+WE+FT G PY + E+ ++ G ++KP
Sbjct: 214 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP 259
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVAMMKEGTMSED--DFI 470
+WE+ L+L + LG G FG V + G + V M+K +D D I
Sbjct: 22 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 81
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
E ++M + +H+N++ L G C++ P+Y++ + +S
Sbjct: 82 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 117
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW++GVL+WE+FT G PY + E+ ++ G ++KP
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP 274
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 99 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 143
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 197 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 242
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ LGSG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 76 DNPHVCRLLGIC 87
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 100 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 144
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 243
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ LGSG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 77 DNPHVCRLLGIC 88
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 100 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 144
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 243
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ LGSG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 77 DNPHVCRLLGIC 88
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 98 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 142
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 241
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ LGSG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 75 DNPHVCRLLGIC 86
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 100 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 144
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 243
Score = 35.0 bits (79), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ LGSG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 77 DNPHVCRLLGIC 88
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 100 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 144
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 243
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ LGSG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 77 DNPHVCRLLGIC 88
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 105 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 149
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 248
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ L SG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 82 DNPHVCRLLGIC 93
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 101 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 145
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 244
Score = 35.0 bits (79), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ LGSG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 78 DNPHVCRLLGIC 89
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 104 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 148
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 202 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 247
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ LGSG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 81 DNPHVCRLLGIC 92
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 98 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 142
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 241
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ LGSG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 75 DNPHVCRLLGIC 86
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 101 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 145
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 244
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ LGSG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 78 DNPHVCRLLGIC 89
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVAMMKEGTMSED--DFI 470
+WE+ L+L + LG G FG V + G + V M+K +D D I
Sbjct: 14 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 73
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
E ++M + +H+N++ L G C++ P+Y++ + +S
Sbjct: 74 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 109
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW++GVL+WE+FT G PY + E+ ++ G ++KP
Sbjct: 221 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP 266
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 100 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 144
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 243
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ LGSG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 77 DNPHVCRLLGIC 88
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVMTR 478
D WEI ++ + + +GSG FG V +GKW G + V M+ + F E V+ +
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 479 LQHQNLVQLYGVCSKHRPIYIVT 501
+H N++ G + + + IVT
Sbjct: 61 TRHVNILLFMGYSTAPQ-LAIVT 82
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 58/103 (56%), Gaps = 8/103 (7%)
Query: 185 GLQKYDDVNGLTLELIHQVL---NYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-TE 240
G +++ ++G L + +V+ + +S +SDV+A+G++++E+ T G++PY + N +
Sbjct: 159 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 217
Query: 241 VVDRVQRGII---LEKPKAWYVGDMSRQRAESILKQEDKEGCF 280
++ V RG + L K ++ M R AE + K+ D+ F
Sbjct: 218 IIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLF 260
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVAMMKEGTMSED--DFI 470
+WE+ L+L + LG G FG V + G + V M+K +D D I
Sbjct: 22 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 81
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
E ++M + +H+N++ L G C++ P+Y++ + +S
Sbjct: 82 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 117
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW++GVL+WE+FT G PY + E+ ++ G ++KP
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP 274
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 101 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 145
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 244
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ LGSG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 78 DNPHVCRLLGIC 89
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 105 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 149
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 248
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ LGSG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 82 DNPHVCRLLGIC 93
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 102 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 146
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 200 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 245
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ LGSG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 79 DNPHVCRLLGIC 90
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 105 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 149
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 248
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ L SG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 82 DNPHVCRLLGIC 93
>pdb|2L2P|A Chain A, Folding Intermediate Of The Fyn Sh3 A39vN53PV55L FROM NMR
RELAXATION Dispersion Experiments
pdb|2LP5|A Chain A, Native Structure Of The Fyn Sh3 A39vN53PV55L
Length = 66
Score = 45.8 bits (107), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
ALY ++A DLS KG ++++++ ++ WW+V+ G GYIPS Y+
Sbjct: 12 ALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEVRSLTTGETGYIPSPYL 61
Score = 35.4 bits (80), Expect = 0.085, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 24/35 (68%)
Query: 77 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
ALY ++A DLS KG ++++++ ++ WW+V+
Sbjct: 12 ALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEVR 46
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 98 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 142
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 241
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ LGSG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 75 DNPHVCRLLGIC 86
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVAMMKEGTMSED--DFI 470
+WE+ L+L + LG G FG V + G + V M+K +D D I
Sbjct: 22 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 81
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
E ++M + +H+N++ L G C++ P+Y++ + +S
Sbjct: 82 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 117
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW++GVL+WE+FT G PY + E+ ++ G ++KP
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP 274
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 132 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 176
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 230 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 275
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 9/64 (14%)
Query: 437 LGSGQFGVVRRGKW-----RGSIDVAMM--KEGTM--SEDDFIEEAKVMTRLQHQNLVQL 487
LGSG FG V +G W + I VA+M +E T + + ++EA VM + + ++ +L
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 488 YGVC 491
G+C
Sbjct: 117 LGIC 120
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 105 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 149
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 248
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ LGSG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 82 DNPHVCRLLGIC 93
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR+
Sbjct: 101 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 145
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 244
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRL 479
E ++ LGSG FG V +G W + I VA+ ++E T + + ++EA VM +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 480 QHQNLVQLYGVC 491
+ ++ +L G+C
Sbjct: 78 DNPHVCRLLGIC 89
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW++GVL+WE+FT G PY + E+ ++ G ++KP
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP 274
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVAMMKEGTMSED--DFI 470
+WE+ L+L + LG G FG V + G + V M+K +D D I
Sbjct: 22 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 81
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
E ++M + +H+N++ L G C++ P+Y++ + +S
Sbjct: 82 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 117
>pdb|1LCK|A Chain A, Sh3-Sh2 Domain Fragment Of Human P56-Lck Tyrosine Kinase
Complexed With The 10 Residue Synthetic Phosphotyrosyl
Peptide Tegqpyqpqpa
Length = 175
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 115 GIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYI 173
G P ++ +V+AL+ ++ GDL EKG + +++ + E WWK + G G+I
Sbjct: 2 GSNPPASPLQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGE-WWKAQSLTTGQEGFI 60
Query: 174 PSNYVKEKELL 184
P N+V + L
Sbjct: 61 PFNFVAKANSL 71
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 319 LSEKHCCHSIPEVKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEF 375
LS K + + G F++R S ST G ++LS+ + + VKHY I+ G F
Sbjct: 81 LSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGF 140
Query: 376 FLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPC 409
++S + + E+V ++ + S GL +RL + PC
Sbjct: 141 YISPRITFPGLHELVRHYTNASDGLCTRL-SRPC 173
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 253 KPKAWYVGDMSRQRAE-SILKQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYH 308
+P+ W+ ++SR+ AE +L + G F++R S ST G ++LS+ + + VKHY
Sbjct: 72 EPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYK 131
Query: 309 IKQNSRGEFFLSEK 322
I+ G F++S +
Sbjct: 132 IRNLDNGGFYISPR 145
Score = 35.0 bits (79), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 66 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
P ++ +V+AL+ ++ GDL EKG + +++ + E WWK +
Sbjct: 6 PASPLQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGE-WWKAQ 50
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVM 476
+ D WEI ++ + + +GSG FG V +GKW G + V M+ + F E V+
Sbjct: 15 AADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
+ +H N++ G + + + IVT
Sbjct: 75 RKTRHVNILLFMGYSTAPQ-LAIVT 98
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 59/103 (57%), Gaps = 8/103 (7%)
Query: 185 GLQKYDDVNGLTLELIHQVL---NYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-TE 240
G +++ ++G L + +V+ + +S +SDV+A+G++++E+ T G++PY + N +
Sbjct: 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQ 233
Query: 241 VVDRVQRGII---LEKPKAWYVGDMSRQRAESILKQEDKEGCF 280
+++ V RG + L K ++ M R AE + K+ D+ F
Sbjct: 234 IIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSF 276
>pdb|4D8K|A Chain A, Crystal Structure Of A Sh3-Sh2 Domains Of A
Lymphocyte-Specific Protein Tyrosine Kinase (Lck) From
Homo Sapiens At 2.36 A Resolution
Length = 175
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 115 GIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYI 173
G P ++ +V+AL+ ++ GDL EKG + +++ + E WWK + G G+I
Sbjct: 2 GSNPPASPLQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGE-WWKAQSLTTGQEGFI 60
Query: 174 PSNYVKEKELL 184
P N+V + L
Sbjct: 61 PFNFVAKANSL 71
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 319 LSEKHCCHSIPEVKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEF 375
LS K + + G F++R S ST G ++LS+ + + VKHY I+ G F
Sbjct: 81 LSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGF 140
Query: 376 FLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPC 409
++S + + E+V ++ + S GL +RL + PC
Sbjct: 141 YISPRITFPGLHELVRHYTNASDGLCTRL-SRPC 173
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 253 KPKAWYVGDMSRQRAE-SILKQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYH 308
+P+ W+ ++SR+ AE +L + G F++R S ST G ++LS+ + + VKHY
Sbjct: 72 EPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYK 131
Query: 309 IKQNSRGEFFLSEK 322
I+ G F++S +
Sbjct: 132 IRNLDNGGFYISPR 145
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 66 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
P ++ +V+AL+ ++ GDL EKG + +++ + E WWK +
Sbjct: 6 PASPLQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGE-WWKAQ 50
>pdb|1UJ0|A Chain A, Crystal Structure Of Stam2 Sh3 Domain In Complex With A
Ubpy-Derived Peptide
Length = 62
Score = 45.4 bits (106), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
V ALY F+A+E +L+ + G V+DD+ +WW+ ++ G+ G PSN+V
Sbjct: 8 VRALYDFEAVEDNELTFKHGELITVLDDSDANWWQGENHRGT-GLFPSNFV 57
Score = 38.1 bits (87), Expect = 0.012, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
V ALY F+A+E +L+ + G V+DD+ +WW+ ++ G
Sbjct: 8 VRALYDFEAVEDNELTFKHGELITVLDDSDANWWQGENHRG 48
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSEDD--FI 470
++KWE L + LG+G FG V G + V M+K +++ +
Sbjct: 38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTD 502
E K+M+ L QH+N+V L G C+ P+ ++T+
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YG+L+WE+F+ G PY G L N++ V+ G + +P
Sbjct: 245 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQP 291
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSEDD--FI 470
++KWE L + LG+G FG V G + V M+K +++ +
Sbjct: 38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTD 502
E K+M+ L QH+N+V L G C+ P+ ++T+
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YG+L+WE+F+ G PY G L N++ V+ G + +P
Sbjct: 243 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQP 289
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 11/57 (19%)
Query: 3 HGSLLNYLRRHENTLGGNVGL-----------LLDMCIQVCKGMAYLERHNYIHRET 48
+G LLN+LRR L + LL QV +GMA+L N IHR+
Sbjct: 134 YGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDV 190
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSEDD--FI 470
++KWE L + LG+G FG V G + V M+K +++ +
Sbjct: 38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTD 502
E K+M+ L QH+N+V L G C+ P+ ++T+
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YG+L+WE+F+ G PY G L N++ V+ G + +P
Sbjct: 243 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQP 289
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 11/57 (19%)
Query: 3 HGSLLNYLRRHENTLGGNVGL-----------LLDMCIQVCKGMAYLERHNYIHRET 48
+G LLN+LRR L + LL QV +GMA+L N IHR+
Sbjct: 134 YGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDV 190
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
F++ SD+W++GV++WE+ + + PY L N +V+ V G L++P
Sbjct: 208 FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP 253
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRGSID--------VAMMKEGTMSED--DFIEEAK 474
E+ ++ LL ELG G FG+V G R I V + E + +F+ EA
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 71
Query: 475 VMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
VM ++V+L GV SK +P +V +
Sbjct: 72 VMKGFTCHHVVRLLGVVSKGQPTLVVME 99
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------LLDMCIQVCKGMAYLERHNYIHRE 47
M HG L +YLR N G ++ M ++ GMAYL ++HR+
Sbjct: 101 MAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRD 154
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L +F++KSDVW++GVL+WE+ T G PY + ++ + +G L +P+
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 319
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M+HG L N++R T V L+ +QV KGM +L ++HR+
Sbjct: 173 MKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRD 217
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L +F++KSDVW++GVL+WE+ T G PY + ++ + +G L +P+
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 265
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M+HG L N++R T V L+ +QV KGM +L ++HR+
Sbjct: 119 MKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRD 163
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSEDD--FI 470
++KWE L + LG+G FG V G + V M+K +++ +
Sbjct: 23 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 82
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTD 502
E K+M+ L QH+N+V L G C+ P+ ++T+
Sbjct: 83 SELKIMSHLGQHENIVNLLGACTHGGPVLVITE 115
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YG+L+WE+F+ G PY G L N++ V+ G + +P
Sbjct: 237 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQP 283
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 20/66 (30%)
Query: 3 HGSLLNYLRRH-ENTLGGNV-------GL------------LLDMCIQVCKGMAYLERHN 42
+G LLN+LRR E LG ++ GL LL QV +GMA+L N
Sbjct: 119 YGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN 178
Query: 43 YIHRET 48
IHR+
Sbjct: 179 CIHRDV 184
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSEDD--FI 470
++KWE L + LG+G FG V G + V M+K +++ +
Sbjct: 30 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 89
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTD 502
E K+M+ L QH+N+V L G C+ P+ ++T+
Sbjct: 90 SELKIMSHLGQHENIVNLLGACTHGGPVLVITE 122
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YG+L+WE+F+ G PY G L N++ V+ G + +P
Sbjct: 231 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQP 277
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Query: 3 HGSLLNYLRRH-ENTLGGNVGL------LLDMCIQVCKGMAYLERHNYIHRET 48
+G LLN+LRR E L G LL QV +GMA+L N IHR+
Sbjct: 126 YGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDV 178
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L +F++KSDVW++GVL+WE+ T G PY + ++ + +G L +P+
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 261
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M+HG L N++R T V L+ +QV KGM +L ++HR+
Sbjct: 115 MKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRD 159
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L +F++KSDVW++GVL+WE+ T G PY + ++ + +G L +P+
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 261
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M+HG L N++R T V L+ +QV KGM +L ++HR+
Sbjct: 115 MKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRD 159
>pdb|2D8J|A Chain A, Solution Structure Of The Sh3 Domain Of Fyn-Related Kinase
Length = 77
Score = 45.1 bits (105), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 8/60 (13%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNGS------VGYIPSNYVKE 180
VAL+ ++A DLS G + +V+D + E WW + +K G+ GYIPSNYV E
Sbjct: 11 VALFDYQARTAEDLSFRAGDKLQVLDTSHEGWWLARHLEKKGTGLGQQLQGYIPSNYVAE 70
Score = 33.1 bits (74), Expect = 0.36, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW 108
VAL+ ++A DLS G + +V+D + E WW
Sbjct: 11 VALFDYQARTAEDLSFRAGDKLQVLDTSHEGWW 43
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L +F++KSDVW++GVL+WE+ T G PY + ++ + +G L +P+
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 259
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M+HG L N++R T V L+ +QV KGM YL ++HR+
Sbjct: 113 MKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD 157
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L +F++KSDVW++GVL+WE+ T G PY + ++ + +G L +P+
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 255
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M+HG L N++R T V L+ +QV KGM YL ++HR+
Sbjct: 109 MKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD 153
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L +F++KSDVW++GVL+WE+ T G PY + ++ + +G L +P+
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 279
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M+HG L N++R T V L+ +QV KGM YL ++HR+
Sbjct: 133 MKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD 177
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSEDD--FI 470
++KWE L + LG+G FG V G + V M+K +++ +
Sbjct: 38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSSF 506
E K+M+ L QH+N+V L G C+ P+ ++T+ +
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 134
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YG+L+WE+F+ G PY G L N++ V+ G + +P
Sbjct: 239 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQP 285
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Query: 3 HGSLLNYLRRH-ENTLGGNVGL------LLDMCIQVCKGMAYLERHNYIHRET 48
+G LLN+LRR E L G LL QV +GMA+L N IHR+
Sbjct: 134 YGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDV 186
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L +F++KSDVW++GVL+WE+ T G PY + ++ + +G L +P+
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 259
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M+HG L N++R T V L+ +QV KGM YL ++HR+
Sbjct: 113 MKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD 157
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L +F++KSDVW++GVL+WE+ T G PY + ++ + +G L +P+
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 278
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M+HG L N++R T V L+ +QV KGM YL ++HR+
Sbjct: 132 MKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD 176
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L +F++KSDVW++GVL+WE+ T G PY + ++ + +G L +P+
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 257
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M+HG L N++R T V L+ +QV KGM YL ++HR+
Sbjct: 111 MKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD 155
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L +F++KSDVW++GVL+WE+ T G PY + ++ + +G L +P+
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 260
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M+HG L N++R T V L+ +QV KGM YL ++HR+
Sbjct: 114 MKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD 158
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L +F++KSDVW++GVL+WE+ T G PY + ++ + +G L +P+
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 258
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M+HG L N++R T V L+ +QV KGM +L ++HR+
Sbjct: 112 MKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRD 156
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L +F++KSDVW++GVL+WE+ T G PY + ++ + +G L +P+
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 258
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M+HG L N++R T V L+ +QV KGM YL ++HR+
Sbjct: 112 MKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD 156
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L +F++KSDVW++GVL+WE+ T G PY + ++ + +G L +P+
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 260
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M+HG L N++R T V L+ +QV KGM +L ++HR+
Sbjct: 114 MKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRD 158
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L +F++KSDVW++GVL+WE+ T G PY + ++ + +G L +P+
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 260
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M+HG L N++R T V L+ +QV KGM YL ++HR+
Sbjct: 114 MKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD 158
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L +F++KSDVW++GVL+WE+ T G PY + ++ + +G L +P+
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 260
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M+HG L N++R T V L+ +QV KGM +L ++HR+
Sbjct: 114 MKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRD 158
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L +F++KSDVW++GVL+WE+ T G PY + ++ + +G L +P+
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 252
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M+HG L N++R T V L+ +QV KGM YL ++HR+
Sbjct: 106 MKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD 150
>pdb|1SKJ|A Chain A, Cocrystal Structure Of Urea-Substituted Phosphopeptide
Complex
Length = 113
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 257 WYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQN 312
WY G ++R+ +E +L E+ G F+VR S +TKG Y LS+ + +VKHY I++
Sbjct: 6 WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 65
Query: 313 SRGEFFLSEKHCCHSIPEV 331
G F+++ + S+ ++
Sbjct: 66 DSGGFYITSRTQFSSLQQL 84
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 332 KDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
++ G F+VR S +TKG Y LS+ + +VKHY I++ G F+++ + S+ +
Sbjct: 24 ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQQ 83
Query: 389 VVNYHRHNSGGLASRLKTSPC 409
+V Y+ ++ GL RL T+ C
Sbjct: 84 LVAYYSKHADGLCHRL-TNVC 103
>pdb|1SHA|A Chain A, Crystal Structure Of The Phosphotyrosine Recognition
Domain Sh2 Of V-Src Complexed With
Tyrosine-Phosphorylated Peptides
pdb|1SHB|A Chain A, Crystal Structure Of The Phosphotyrosine Recognition
Domain Sh2 Of V-Src Complexed With
Tyrosine-Phosphorylated Peptides
pdb|1SPR|A Chain A, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
pdb|1SPR|B Chain B, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
pdb|1SPR|C Chain C, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
pdb|1SPR|D Chain D, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
pdb|1SPS|A Chain A, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
pdb|1SPS|B Chain B, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
pdb|1SPS|C Chain C, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
Length = 104
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 253 KPKAWYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYH 308
+ + WY G ++R+ +E +L E+ G F+VR S +TKG Y LS+ + +VKHY
Sbjct: 1 QAEEWYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYK 60
Query: 309 IKQNSRGEFFLSEK 322
I++ G F+++ +
Sbjct: 61 IRKLDSGGFYITSR 74
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 332 KDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
++ G F+VR S +TKG Y LS+ + +VKHY I++ G F+++ + S+ +
Sbjct: 23 ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQQ 82
Query: 389 VVNYHRHNSGGLASRLKTSPC 409
+V Y+ ++ GL RL T+ C
Sbjct: 83 LVAYYSKHADGLCHRL-TNVC 102
>pdb|1P13|A Chain A, Crystal Structure Of The Src Sh2 Domain Complexed With
Peptide (Sdpyanfk)
pdb|1P13|B Chain B, Crystal Structure Of The Src Sh2 Domain Complexed With
Peptide (Sdpyanfk)
Length = 102
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 257 WYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQN 312
WY G ++R+ +E +L E+ G F+VR S +TKG Y LS+ + +VKHY I++
Sbjct: 4 WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 63
Query: 313 SRGEFFLSEK 322
G F+++ +
Sbjct: 64 DSGGFYITSR 73
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 332 KDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
++ G F+VR S +TKG Y LS+ + +VKHY I++ G F+++ + S+ +
Sbjct: 22 ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQQ 81
Query: 389 VVNYHRHNSGGLASRLKTSPC 409
+V Y+ ++ GL RL T+ C
Sbjct: 82 LVAYYSKHADGLCHRL-TNVC 101
>pdb|1WXB|A Chain A, Solution Structure Of The Sh3 Domain From Human Epidermal
Growth Factor Receptor Pathway Substrate 8-Like Protein
Length = 68
Score = 44.7 bits (104), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
K V LY F A +LS+ K EV++D ++ WWK++ ++G GY+P N + E
Sbjct: 8 KYVKILYDFTARNANELSVLKDEVLEVLEDGRQ-WWKLRSRSGQAGYVPCNILGE 61
Score = 32.7 bits (73), Expect = 0.48, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
K V LY F A +LS+ K EV++D ++ WWK++ ++G
Sbjct: 8 KYVKILYDFTARNANELSVLKDEVLEVLEDGRQ-WWKLRSRSG 49
>pdb|1IS0|A Chain A, Crystal Structure Of A Complex Of The Src Sh2 Domain With
Conformationally Constrained Peptide Inhibitor
pdb|1IS0|B Chain B, Crystal Structure Of A Complex Of The Src Sh2 Domain With
Conformationally Constrained Peptide Inhibitor
pdb|2JYQ|A Chain A, Nmr Structure Of The Apo V-Src Sh2 Domain
Length = 106
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 253 KPKAWYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYH 308
+ + WY G ++R+ +E +L E+ G F+VR S +TKG Y LS+ + +VKHY
Sbjct: 1 QAEEWYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYK 60
Query: 309 IKQNSRGEFFLSEK 322
I++ G F+++ +
Sbjct: 61 IRKLDSGGFYITSR 74
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 332 KDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
++ G F+VR S +TKG Y LS+ + +VKHY I++ G F+++ + S+ +
Sbjct: 23 ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQQ 82
Query: 389 VVNYHRHNSGGLASRLKTSPC 409
+V Y+ ++ GL RL T+ C
Sbjct: 83 LVAYYSKHADGLCHRL-TNVC 102
>pdb|1NZL|A Chain A, Crystal Structure Of Src Sh2 Domain Bound To Doubly
Phosphorylated Peptide Pqpyepyipi
pdb|1NZL|B Chain B, Crystal Structure Of Src Sh2 Domain Bound To Doubly
Phosphorylated Peptide Pqpyepyipi
pdb|1NZV|A Chain A, Crystal Structure Of Src Sh2 Domain Bound To Doubly
Phosphorylated Peptide Pqpyipyvpa
pdb|1NZV|B Chain B, Crystal Structure Of Src Sh2 Domain Bound To Doubly
Phosphorylated Peptide Pqpyipyvpa
Length = 103
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 257 WYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQN 312
WY G ++R+ +E +L E+ G F+VR S +TKG Y LS+ + +VKHY I++
Sbjct: 4 WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 63
Query: 313 SRGEFFLSEK 322
G F+++ +
Sbjct: 64 DSGGFYITSR 73
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 332 KDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
++ G F+VR S +TKG Y LS+ + +VKHY I++ G F+++ + S+ +
Sbjct: 22 ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQQ 81
Query: 389 VVNYHRHNSGGLASRLKTSPC 409
+V Y+ ++ GL RL T+ C
Sbjct: 82 LVAYYSKHADGLCHRL-TNVC 101
>pdb|1KC2|A Chain A, Structure Of The Triple (Lys(Beta)d3ala, Asp(Beta)c8ala,
Aspcd2ala) Mutant Of The Src Sh2 Domain Bound To The
Pqpyeeipi Peptide
Length = 103
Score = 44.7 bits (104), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 257 WYVGDMSRQRAES-ILKQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQN 312
WY G ++R+ +E +L E+ G F+VR S +TKG Y LS+ + +V HY I++
Sbjct: 4 WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSAFANAKGLNVAHYKIRKL 63
Query: 313 SRGEFFLSEK 322
G F+++ +
Sbjct: 64 DSGGFYITSR 73
Score = 42.0 bits (97), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 332 KDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
++ G F+VR S +TKG Y LS+ + +V HY I++ G F+++ + S+ +
Sbjct: 22 ENPRGTFLVRESETTKGAYCLSVSAFANAKGLNVAHYKIRKLDSGGFYITSRTQFSSLQQ 81
Query: 389 VVNYHRHNSGGLASRLKTSPC 409
+V Y+ ++ GL RL T+ C
Sbjct: 82 LVAYYSKHADGLCHRL-TNVC 101
>pdb|2L0A|A Chain A, Solution Nmr Structure Of Signal Transducing Adapter
Molecule 1 Stam-1 From Homo Sapiens, Northeast
Structural Genomics Consortium Target Hr4479e
Length = 72
Score = 44.7 bits (104), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
V A+Y F+A E +L+ + G V+DD+ +WWK + G +G PSN+V
Sbjct: 20 VRAIYDFEAAEDNELTFKAGEIITVLDDSDPNWWKGETHQG-IGLFPSNFV 69
Score = 38.1 bits (87), Expect = 0.013, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGI 116
V A+Y F+A E +L+ + G V+DD+ +WWK + GI
Sbjct: 20 VRAIYDFEAAEDNELTFKAGEIITVLDDSDPNWWKGETHQGI 61
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
++ +SDVW++GVL+WE+F+ G PY +K + E R++ G + P
Sbjct: 279 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 325
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIEE 472
KWE L L + LG G FG V G ++ V M+KEG + + E
Sbjct: 23 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 82
Query: 473 AKVMTRLQHQ-NLVQLYGVCSKH-RPIYIVTDTSSF 506
K++ + H N+V L G C+K P+ ++ + F
Sbjct: 83 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 118
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
++ +SDVW++GVL+WE+F+ G PY +K + E R++ G + P
Sbjct: 229 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 275
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIEE 472
KWE L L + LG G FG V G ++ V M+KEG + + E
Sbjct: 23 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 82
Query: 473 AKVMTRLQHQ-NLVQLYGVCSKH-RPIYIVTDTSSF 506
K++ + H N+V L G C+K P+ ++ + F
Sbjct: 83 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 118
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
++ +SDVW++GVL+WE+F+ G PY +K + E R++ G + P
Sbjct: 277 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 323
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIEE 472
KWE L L + LG G FG V G ++ V M+KEG + + E
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 80
Query: 473 AKVMTRLQHQ-NLVQLYGVCSKH-RPIYIVTDTSSF 506
K++ + H N+V L G C+K P+ ++ + F
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 116
>pdb|2K2M|A Chain A, Structural Basis Of Pxxdy Motif Recognition In Sh3 Binding
Length = 68
Score = 44.3 bits (103), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSN 176
K V+ Y F+A +LS+++ EV+DD+++ WWKV+D G GY+P N
Sbjct: 9 KWVLCNYDFQARNSSELSVKQRDVLEVLDDSRK-WWKVRDPAGQEGYVPYN 58
Score = 34.7 bits (78), Expect = 0.12, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
K V+ Y F+A +LS+++ EV+DD+++ WWKV+D G
Sbjct: 9 KWVLCNYDFQARNSSELSVKQRDVLEVLDDSRK-WWKVRDPAG 50
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
++ +SDVW++GVL+WE+F+ G PY +K + E R++ G + P
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIEE 472
KWE L L + LG G FG V G ++ V M+KEG + + E
Sbjct: 23 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSE 82
Query: 473 AKVMTRLQHQ-NLVQLYGVCSKH-RPIYIVTDTSSF 506
K++ + H N+V L G C+K P+ ++ + F
Sbjct: 83 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 118
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
++ +SDVW++GVL+WE+F+ G PY +K + E R++ G + P
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIEE 472
KWE L L + LG G FG V G ++ V M+KEG + + E
Sbjct: 22 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 81
Query: 473 AKVMTRLQHQ-NLVQLYGVCSKH-RPIYIVTDTSSF 506
K++ + H N+V L G C+K P+ ++ + F
Sbjct: 82 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 117
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
++ +SDVW++GVL+WE+F+ G PY +K + E R++ G + P
Sbjct: 223 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAP 269
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIEE 472
KWE L L + LG G FG V G ++ V M+KEG + + E
Sbjct: 21 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSE 80
Query: 473 AKVMTRLQHQ-NLVQLYGVCSKH-RPIYIVTDTSSF 506
K++ + H N+V L G C+K P+ ++ + F
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 116
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
++ +SDVW++GVL+WE+F+ G PY +K + E R++ G + P
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 264
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 12/96 (12%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIEE 472
KWE L L + LG G FG V G ++ V M+KEG + + E
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 71
Query: 473 AKVMTRLQHQ-NLVQLYGVCSKH-RPIYIVTDTSSF 506
K++ + H N+V L G C+K P+ ++T+ F
Sbjct: 72 LKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKF 107
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
++ +SDVW++GVL+WE+F+ G PY +K + E R++ G + P
Sbjct: 270 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 316
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIEE 472
KWE L L + LG G FG V G ++ V M+KEG + + E
Sbjct: 14 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 73
Query: 473 AKVMTRLQHQ-NLVQLYGVCSK-HRPIYIVTDTSSF 506
K++ + H N+V L G C+K P+ ++ + F
Sbjct: 74 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 109
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
++ +SDVW++GVL+WE+F+ G PY +K + E R++ G + P
Sbjct: 272 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 318
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIEE 472
KWE L L + LG G FG V G ++ V M+KEG + + E
Sbjct: 16 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 75
Query: 473 AKVMTRLQHQ-NLVQLYGVCSKH-RPIYIVTDTSSF 506
K++ + H N+V L G C+K P+ ++ + F
Sbjct: 76 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 111
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
++ +SDVW++GVL+WE+F+ G PY +K + E R++ G + P
Sbjct: 223 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 269
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIEE 472
KWE L L + LG G FG V G ++ V M+KEG + + E
Sbjct: 21 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSE 80
Query: 473 AKVMTRLQHQ-NLVQLYGVCSKH-RPIYIVTDTSSF 506
K++ + H N+V L G C+K P+ ++ + F
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 116
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
++ +SDVW++GVL+WE+F+ G PY +K + E R++ G + P
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIEE 472
KWE L L + LG G FG V G ++ V M+KEG + + E
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 80
Query: 473 AKVMTRLQHQ-NLVQLYGVCSKH-RPIYIVTDTSSF 506
K++ + H N+V L G C+K P+ ++ + F
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 116
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
++ +SDVW++GVL+WE+F+ G PY +K + E R++ G + P
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 264
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 12/96 (12%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIEE 472
KWE L L + LG G FG V G ++ V M+KEG + + E
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 71
Query: 473 AKVMTRLQHQ-NLVQLYGVCSKH-RPIYIVTDTSSF 506
K++ + H N+V L G C+K P+ ++T+ F
Sbjct: 72 LKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKF 107
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
++ +SDVW++GVL+WE+F+ G PY +K + E R++ G + P
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIEE 472
KWE L L + LG G FG V G ++ V M+KEG + + E
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 80
Query: 473 AKVMTRLQHQ-NLVQLYGVCSKH-RPIYIVTDTSSF 506
K++ + H N+V L G C+K P+ ++ + F
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 116
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
++ +SDVW++GVL+WE+F+ G PY +K + E R++ G + P
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIEE 472
KWE L L + LG G FG V G ++ V M+KEG + + E
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 80
Query: 473 AKVMTRLQHQ-NLVQLYGVCSKH-RPIYIVTDTSSF 506
K++ + H N+V L G C+K P+ ++ + F
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 116
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
++ +SDVW++GVL+WE+F+ G PY +K + E R++ G + P
Sbjct: 264 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 310
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIEE 472
KWE L L + LG G FG V G ++ V M+KEG + + E
Sbjct: 58 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 117
Query: 473 AKVMTRLQHQ-NLVQLYGVCSKH-RPIYIVTDTSSF 506
K++ + H N+V L G C+K P+ ++ + F
Sbjct: 118 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 153
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
++ +SDVW++GVL+WE+F+ G PY +K + E R++ G + P
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 264
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIEE 472
KWE L L + LG G FG V G ++ V M+KEG + + E
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 71
Query: 473 AKVMTRLQHQ-NLVQLYGVCSKH-RPIYIVTDTSSF 506
K++ + H N+V L G C+K P+ ++ + F
Sbjct: 72 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 107
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
++ +SDVW++GVL+WE+F+ G PY +K + E R++ G + P
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 264
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 12/96 (12%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIEE 472
KWE L L + LG G FG V G ++ V M+KEG + + E
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 71
Query: 473 AKVMTRLQHQ-NLVQLYGVCSKH-RPIYIVTDTSSF 506
K++ + H N+V L G C+K P+ ++T+ F
Sbjct: 72 LKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKF 107
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
M G LL+Y+R H++ +G LL+ C+Q+ +GM YLE +HR+
Sbjct: 95 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAEGMNYLEDRRLVHRD 139
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 193 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 238
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 9/64 (14%)
Query: 437 LGSGQFGVVRRGKW-----RGSIDVAM--MKEGTM--SEDDFIEEAKVMTRLQHQNLVQL 487
LGSG FG V +G W + I VA+ ++E T + + ++EA VM + + ++ +L
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 488 YGVC 491
G+C
Sbjct: 80 LGIC 83
>pdb|2JXB|A Chain A, Structure Of Cd3epsilon-Nck2 First Sh3 Domain Complex
Length = 86
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
+V+A + + A + +L ++K ++DD++ WW+V++ GY+PSNYV+ K
Sbjct: 33 IVIAKWDYTAQQDQELDIKKNERLWLLDDSKT-WWRVRNAANRTGYVPSNYVERK 86
>pdb|2LQN|A Chain A, Solution Structure Of Crkl
Length = 303
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V LY F + DL +KG +++ +E WW ++K+G VG IP YV++
Sbjct: 128 VRTLYDFPGNDAEDLPFKKGEILVIIEKPEEQWWSARNKDGRVGMIPVPYVEK 180
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 256 AWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSR 314
AWY+G +SRQ A++ L Q + G F+VR+SST G Y LS+ V HY I
Sbjct: 13 AWYMGPVSRQEAQTRL-QGQRHGMFLVRDSSTCPGDYVLSVSENS---RVSHYIINSLPN 68
Query: 315 GEFFLSEKHCCH 326
F + ++ H
Sbjct: 69 RRFKIGDQEFDH 80
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
V LY F + DL +KG +++ +E WW ++K+G
Sbjct: 128 VRTLYDFPGNDAEDLPFKKGEILVIIEKPEEQWWSARNKDG 168
>pdb|2LQW|A Chain A, Solution Structure Of Phosphorylated Crkl
Length = 303
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V LY F + DL +KG +++ +E WW ++K+G VG IP YV++
Sbjct: 128 VRTLYDFPGNDAEDLPFKKGEILVIIEKPEEQWWSARNKDGRVGMIPVPYVEK 180
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 256 AWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSR 314
AWY+G +SRQ A++ L Q + G F+VR+SST G Y LS+ V HY I
Sbjct: 13 AWYMGPVSRQEAQTRL-QGQRHGMFLVRDSSTCPGDYVLSVSENS---RVSHYIINSLPN 68
Query: 315 GEFFLSEKHCCH 326
F + ++ H
Sbjct: 69 RRFKIGDQEFDH 80
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
V LY F + DL +KG +++ +E WW ++K+G
Sbjct: 128 VRTLYDFPGNDAEDLPFKKGEILVIIEKPEEQWWSARNKDG 168
>pdb|2JW4|A Chain A, Nmr Solution Structure Of The N-Terminal Sh3 Domain Of
Human Nckalpha
Length = 72
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 122 MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
M VVVA + + A + +L ++K ++DD++ WW+V++ G++PSNYV+ K
Sbjct: 4 MAEEVVVVAKFDYVAQQEQELDIKKNERLWLLDDSKS-WWRVRNSMNKTGFVPSNYVERK 62
>pdb|2B86|A Chain A, Solution Structure Of The First Src Homology 3 Domain Of
Nck2
Length = 67
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 122 MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
M +V+A + + A + +L ++K ++DD++ WW+V++ GY+PSNYV+ K
Sbjct: 1 MTEEVIVIAKWDYTAQQDQELDIKKNERLWLLDDSKT-WWRVRNAANRTGYVPSNYVERK 59
>pdb|3CQT|A Chain A, N53i V55l Mutant Of Fyn Sh3 Domain
Length = 79
Score = 43.9 bits (102), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
ALY ++A DLS KG ++++++ ++ WW+ + G GYIPS Y+
Sbjct: 10 ALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSIYL 59
Score = 33.5 bits (75), Expect = 0.26, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 23/35 (65%)
Query: 77 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
ALY ++A DLS KG ++++++ ++ WW+ +
Sbjct: 10 ALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEAR 44
>pdb|1F1W|A Chain A, Src Sh2 Thref1trp Mutant Complexed With The Phosphopeptide
S(Ptr)vnvqn
pdb|1F2F|A Chain A, Src Sh2 Thref1trp Mutant
Length = 104
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 257 WYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQN 312
WY G ++R+ +E +L E+ G F+VR S +TKG Y LS+ + +VKHY I++
Sbjct: 5 WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 64
Query: 313 SRGEFFL 319
G F++
Sbjct: 65 DSGGFYI 71
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 332 KDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
++ G F+VR S +TKG Y LS+ + +VKHY I++ G F++ + S+ +
Sbjct: 23 ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYIWSRTQFSSLQQ 82
Query: 389 VVNYHRHNSGGLASRLKTSPC 409
+V Y+ ++ GL RL T+ C
Sbjct: 83 LVAYYSKHADGLCHRL-TNVC 102
>pdb|1GRI|A Chain A, Grb2
pdb|1GRI|B Chain B, Grb2
Length = 217
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 245 VQRGIILEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPH 303
+ + I KP W+ G + R +AE +L ++ +G F++R S S G ++LS+
Sbjct: 48 IPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---ND 104
Query: 304 VKHYHIKQNSRGEFFL 319
V+H+ + ++ G++FL
Sbjct: 105 VQHFKVLRDGAGKYFL 120
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
+P V AL+ F E G+L +G VMD++ +WWK +G G P NYV
Sbjct: 157 QPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGA-CHGQTGMFPRNYV 210
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
+A Y FKA +LS ++G +V+++ + W + NG G+IP NY++ K
Sbjct: 3 AIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMK 56
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 71 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
+P V AL+ F E G+L +G VMD++ +WWK
Sbjct: 157 QPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWK 195
>pdb|2JS2|A Chain A, Solution Structure Of First Sh3 Domain Of Adaptor Nck
Length = 63
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 122 MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
M VVVA + + A + +L ++K ++DD++ WW+V++ G++PSNYV+ K
Sbjct: 3 MAEEVVVVAKFDYVAQQEQELDIKKNERLWLLDDSK-SWWRVRNSMNKTGFVPSNYVERK 61
>pdb|1X27|A Chain A, Crystal Structure Of Lck Sh2-Sh3 With Sh2 Binding Site Of
P130cas
pdb|1X27|B Chain B, Crystal Structure Of Lck Sh2-Sh3 With Sh2 Binding Site Of
P130cas
pdb|1X27|C Chain C, Crystal Structure Of Lck Sh2-Sh3 With Sh2 Binding Site Of
P130cas
pdb|1X27|D Chain D, Crystal Structure Of Lck Sh2-Sh3 With Sh2 Binding Site Of
P130cas
pdb|1X27|E Chain E, Crystal Structure Of Lck Sh2-Sh3 With Sh2 Binding Site Of
P130cas
pdb|1X27|F Chain F, Crystal Structure Of Lck Sh2-Sh3 With Sh2 Binding Site Of
P130cas
Length = 167
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKEKELL 184
+V+AL+ ++ GDL EKG + +++ + E WWK + G G+IP N+V + L
Sbjct: 5 NLVIALHSYEPSHDGDLGFEKGEQLRILEQSGE-WWKAQSLTTGQEGFIPFNFVAKANSL 63
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 319 LSEKHCCHSIPEVKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEF 375
LS K + + G F++R S ST G ++LS+ + + VKHY I+ G F
Sbjct: 73 LSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGF 132
Query: 376 FLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPC 409
++S + + E+V ++ + S GL +RL + PC
Sbjct: 133 YISPRITFPGLHELVRHYTNASDGLCTRL-SRPC 165
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 253 KPKAWYVGDMSRQRAE-SILKQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYH 308
+P+ W+ ++SR+ AE +L + G F++R S ST G ++LS+ + + VKHY
Sbjct: 64 EPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYK 123
Query: 309 IKQNSRGEFFLSEK 322
I+ G F++S +
Sbjct: 124 IRNLDNGGFYISPR 137
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
+V+AL+ ++ GDL EKG + +++ + E WWK +
Sbjct: 5 NLVIALHSYEPSHDGDLGFEKGEQLRILEQSGE-WWKAQ 42
>pdb|3REB|B Chain B, Hiv-1 Nef Protein In Complex With Engineered Hck-Sh3
Domain
pdb|3REB|D Chain D, Hiv-1 Nef Protein In Complex With Engineered Hck-Sh3
Domain
Length = 90
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
+VVALY + + DLS +KG + V++++ E WWK + GYIPSNYV
Sbjct: 5 IVVALYDYVSWSPDDLSFQKGDQMVVLEESGE-WWKARSLATRKEGYIPSNYV 56
Score = 32.0 bits (71), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
+VVALY + + DLS +KG + V++++ E WWK +
Sbjct: 5 IVVALYDYVSWSPDDLSFQKGDQMVVLEESGE-WWKAR 41
>pdb|1BMB|A Chain A, Grb2-Sh2 Domain In Complex With KpfyVnvef (Pkf270-974)
Length = 123
Score = 42.7 bits (99), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
KP W+ G + R +AE +L ++ +G F++R S S G ++LS+ V+H+ + +
Sbjct: 11 KPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHFKVLR 67
Query: 312 NSRGEFFL 319
+ G++FL
Sbjct: 68 DGAGKYFL 75
>pdb|3N84|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
23-Membered Macrocyclic Ligand Having The Sequence
Pyvnvp
pdb|3N84|B Chain B, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
23-Membered Macrocyclic Ligand Having The Sequence
Pyvnvp
pdb|3N84|C Chain C, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
23-Membered Macrocyclic Ligand Having The Sequence
Pyvnvp
pdb|3N84|D Chain D, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
23-Membered Macrocyclic Ligand Having The Sequence
Pyvnvp
pdb|3N84|E Chain E, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
23-Membered Macrocyclic Ligand Having The Sequence
Pyvnvp
pdb|3N84|F Chain F, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
23-Membered Macrocyclic Ligand Having The Sequence
Pyvnvp
Length = 112
Score = 42.7 bits (99), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 249 IILEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHY 307
+I KP W+ G + R +AE +L ++ +G F++R S S G ++LS+ V+H+
Sbjct: 1 MIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHF 57
Query: 308 HIKQNSRGEFFL 319
+ ++ G++FL
Sbjct: 58 KVLRDGAGKYFL 69
>pdb|1FHS|A Chain A, The Three-Dimensional Solution Structure Of The Src
Homology Domain-2 Of The Growth Factor Receptor Bound
Protein-2, Nmr, 18 Structures
Length = 112
Score = 42.7 bits (99), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
KP W+ G + R +AE +L ++ +G F++R S S G ++LS+ V+H+ + +
Sbjct: 5 KPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHFKVLR 61
Query: 312 NSRGEFFL 319
+ G++FL
Sbjct: 62 DGAGKYFL 69
>pdb|3RBB|B Chain B, Hiv-1 Nef Protein In Complex With Engineered Hck Sh3
Domain
pdb|3RBB|D Chain D, Hiv-1 Nef Protein In Complex With Engineered Hck Sh3
Domain
Length = 61
Score = 42.7 bits (99), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
+VVALY + + DLS +KG + V++++ E WWK + GYIPSNYV
Sbjct: 5 IVVALYDYYSPFSWDLSFQKGDQMVVLEESGE-WWKARSLATRKEGYIPSNYV 56
Score = 32.3 bits (72), Expect = 0.70, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
+VVALY + + DLS +KG + V++++ E WWK +
Sbjct: 5 IVVALYDYYSPFSWDLSFQKGDQMVVLEESGE-WWKAR 41
>pdb|2VWF|A Chain A, Grb2 Sh3c (2)
pdb|2W0Z|A Chain A, Grb2 Sh3c (3)
Length = 58
Score = 42.7 bits (99), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
P V AL+ F E G+L +G VMD++ +WWK +G G P NYV
Sbjct: 2 PTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWK-GACHGQTGMFPRNYV 54
Score = 36.2 bits (82), Expect = 0.043, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 72 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
P V AL+ F E G+L +G VMD++ +WWK
Sbjct: 2 PTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWK 39
>pdb|3OVE|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
Pyxn- Derived Tripeptide
Length = 117
Score = 42.7 bits (99), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
KP W+ G + R +AE +L ++ +G F++R S S G ++LS+ V+H+ + +
Sbjct: 4 KPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHFKVLR 60
Query: 312 NSRGEFFL 319
+ G++FL
Sbjct: 61 DGAGKYFL 68
>pdb|3IMD|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
Flexible Ac-Py-Q-N-Nh2 Tripeptide Mimic
pdb|3IMD|B Chain B, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
Flexible Ac-Py-Q-N-Nh2 Tripeptide Mimic
pdb|3IMJ|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
Cyclopropyl-Constrained Ac-Ptyr-Ile-Asn-Nh2 Tripeptide
Mimic
pdb|3IMJ|B Chain B, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
Cyclopropyl-Constrained Ac-Ptyr-Ile-Asn-Nh2 Tripeptide
Mimic
pdb|3IN7|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
Cyclopropyl-Constrained Ac-Py-Q-N-Nh2 Tripeptide Mimic
pdb|3IN7|C Chain C, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
Cyclopropyl-Constrained Ac-Py-Q-N-Nh2 Tripeptide Mimic
pdb|3IN8|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
Flexible Ac-Ptyr-Ile-Asn-Nh2 Tripeptide Mimic
pdb|3KFJ|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
Flexible Ac-py-e-n-nh2 Tripeptide Mimic
pdb|3N8M|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
An Acyclic Ligand Having The Sequence Pyvnvp
pdb|3OV1|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
Pyxn- Derived Tripeptide
pdb|3S8L|A Chain A, Protein-Ligand Interactions: Thermodynamic Effects
Associated With Increasing Hydrophobic Surface Area
pdb|3S8N|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
Pyxn- Derived Tripeptide
pdb|3S8O|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
Pyxn- Derived Tripeptide
Length = 117
Score = 42.7 bits (99), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
KP W+ G + R +AE +L ++ +G F++R S S G ++LS+ V+H+ + +
Sbjct: 4 KPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHFKVLR 60
Query: 312 NSRGEFFL 319
+ G++FL
Sbjct: 61 DGAGKYFL 68
>pdb|1UHF|A Chain A, Solution Structure Of The Third Sh3 Domain Of Human
Intersectin 2(Kiaa1256)
Length = 69
Score = 42.7 bits (99), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW--KVKDKNGSVGYIPSNYVKEKE 182
+ALYP+ ++E GDL+ +G E V E WW + D++ G PSNYVK K+
Sbjct: 12 IALYPYSSVEPGDLTFTEGEEILVTQKDGE-WWTGSIGDRS---GIFPSNYVKPKD 63
Score = 38.9 bits (89), Expect = 0.007, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW--KVKDKNGIRKPDQMIRPK 126
+ALYP+ ++E GDL+ +G E V E WW + D++GI P ++PK
Sbjct: 12 IALYPYSSVEPGDLTFTEGEEILVTQKDGE-WWTGSIGDRSGIF-PSNYVKPK 62
>pdb|3GF9|A Chain A, Crystal Structure Of Human Intersectin 2 Rhogef Domain
Length = 295
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
V+A+Y + A +LS KG VM+ WW+ + NG G PSNYVK
Sbjct: 21 VIAMYDYAANNEDELSFSKGQLINVMNKDDPDWWQ-GEINGVTGLFPSNYVK 71
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
V+A+Y + A +LS KG VM+ WW+
Sbjct: 21 VIAMYDYAANNEDELSFSKGQLINVMNKDDPDWWQ 55
>pdb|2AOA|A Chain A, Crystal Structures Of A High-affinity Macrocyclic Peptide
Mimetic In Complex With The Grb2 Sh2 Domain
pdb|2AOA|B Chain B, Crystal Structures Of A High-affinity Macrocyclic Peptide
Mimetic In Complex With The Grb2 Sh2 Domain
pdb|2AOB|A Chain A, Crystal Structures Of A High-Affinity Macrocyclic Peptide
Mimetic In Complex With The Grb2 Sh2 Domain
pdb|2AOB|B Chain B, Crystal Structures Of A High-Affinity Macrocyclic Peptide
Mimetic In Complex With The Grb2 Sh2 Domain
pdb|2AOB|C Chain C, Crystal Structures Of A High-Affinity Macrocyclic Peptide
Mimetic In Complex With The Grb2 Sh2 Domain
pdb|2AOB|D Chain D, Crystal Structures Of A High-Affinity Macrocyclic Peptide
Mimetic In Complex With The Grb2 Sh2 Domain
Length = 99
Score = 42.4 bits (98), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
KP W+ G + R +AE +L ++ +G F++R S S G ++LS+ V+H+ + +
Sbjct: 2 KPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHFKVLR 58
Query: 312 NSRGEFFL 319
+ G++FL
Sbjct: 59 DGAGKYFL 66
>pdb|2D8H|A Chain A, Solution Structure Of The Sh3 Domain Of Hypothetical
Protein Sh3yl1
Length = 80
Score = 42.4 bits (98), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 114 NGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH--WWKVKDKNGSVG 171
+G + + +P V ALY F+ + GDL+ + G V+ T H WW+ K + G G
Sbjct: 6 SGHERVGNLNQPIEVTALYSFEGQQPGDLNFQAGDRITVISKTDSHFDWWEGKLR-GQTG 64
Query: 172 YIPSNYV 178
P+NYV
Sbjct: 65 IFPANYV 71
Score = 34.7 bits (78), Expect = 0.12, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 71 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH--WW--KVKDKNGI 116
+P V ALY F+ + GDL+ + G V+ T H WW K++ + GI
Sbjct: 16 QPIEVTALYSFEGQQPGDLNFQAGDRITVISKTDSHFDWWEGKLRGQTGI 65
>pdb|1ZFP|E Chain E, Growth Factor Receptor Binding Protein Sh2 Domain
Complexed With A Phosphotyrosyl Pentapeptide
Length = 98
Score = 42.4 bits (98), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
KP W+ G + R +AE +L ++ +G F++R S S G ++LS+ V+H+ + +
Sbjct: 1 KPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHFKVLR 57
Query: 312 NSRGEFFL 319
+ G++FL
Sbjct: 58 DGAGKYFL 65
>pdb|1TZE|E Chain E, Signal Transduction Adaptor Growth Factor, Grb2 Sh2 Domain
Complexed With Phosphotyrosyl Heptapeptide
Lys-Pro-Phe-Ptyr-Val-Asn-Val-Nh2 (Kfppyvnc-Nh2)
pdb|3N7Y|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
20-Membered Macrocyclic Ligand Having The Sequence Pyvnv
pdb|3N7Y|B Chain B, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
20-Membered Macrocyclic Ligand Having The Sequence Pyvnv
pdb|3N7Y|C Chain C, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
20-Membered Macrocyclic Ligand Having The Sequence Pyvnv
Length = 98
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
KP W+ G + R +AE +L ++ +G F++R S S G ++LS+ V+H+ + +
Sbjct: 2 KPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHFKVLR 58
Query: 312 NSRGEFFL 319
+ G++FL
Sbjct: 59 DGAGKYFL 66
>pdb|3MXC|A Chain A, Structures Of Grb2-Sh2 Domain And Aicd Peptide Complexes
Reveal A Conformational Switch And Their Functional
Implications.
pdb|3MXY|A Chain A, Structures Of Grb2-Sh2 Domain And Aicd Peptide Complexes
Reveal A Conformational Switch And Their Functional
Implications
Length = 101
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
KP W+ G + R +AE +L ++ +G F++R S S G ++LS+ V+H+ + +
Sbjct: 5 KPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHFKVLR 61
Query: 312 NSRGEFFL 319
+ G++FL
Sbjct: 62 DGAGKYFL 69
>pdb|2H46|E Chain E, Native Domain-Swapped Dimer Crystal Structure Of The Grb2
Sh2 Domain
pdb|2H5K|A Chain A, Crystal Structure Of Complex Between The Domain-Swapped
Dimeric Grb2 Sh2 Domain And Shc-Derived Ligand,
Ac-Nh-Ptyr-Val-Asn-Nh2
pdb|2H5K|B Chain B, Crystal Structure Of Complex Between The Domain-Swapped
Dimeric Grb2 Sh2 Domain And Shc-Derived Ligand,
Ac-Nh-Ptyr-Val-Asn-Nh2
pdb|2HUW|A Chain A, X-Ray Crystal Structure Of The Grb2 Sh2 Domain Complexed
To A Constrained And Cyclopropane-Derived Ligand
pdb|2HUW|B Chain B, X-Ray Crystal Structure Of The Grb2 Sh2 Domain Complexed
To A Constrained And Cyclopropane-Derived Ligand
pdb|3C7I|A Chain A, X-Ray Crystal Structure Of The Complex Between The
Grb2-Sh2 Domain And A Flexible Ligand, Fptvn
Length = 116
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
KP W+ G + R +AE +L ++ +G F++R S S G ++LS+ V+H+ + +
Sbjct: 4 KPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHFKVLR 60
Query: 312 NSRGEFFL 319
+ G++FL
Sbjct: 61 DGAGKYFL 68
>pdb|2DL4|A Chain A, Solution Structure Of The First Sh3 Domain Of Stac Protein
Length = 68
Score = 42.4 bits (98), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
VALY F E DL + G +++D+ E WWK K ++ +G+ P+N+V+
Sbjct: 11 VALYKFVPQENEDLEMRPGDIITLLEDSNEDWWKGKIQD-RIGFFPANFVQ 60
Score = 34.3 bits (77), Expect = 0.16, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGI 116
VALY F E DL + G +++D+ E WWK K ++ I
Sbjct: 11 VALYKFVPQENEDLEMRPGDIITLLEDSNEDWWKGKIQDRI 51
>pdb|1BM2|A Chain A, Grb2-Sh2 Domain In Complex With
Cyclo-[n-Alpha-Acetyl-L-Thi
Alysyl-O-Phosphotyrosyl-Valyl-Asparagyl-Valyl-Prolyl]
(Pkf273-791)
Length = 117
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
KP W+ G + R +AE +L ++ +G F++R S S G ++LS+ V+H+ + +
Sbjct: 10 KPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGN---DVQHFKVLR 66
Query: 312 NSRGEFFL 319
+ G++FL
Sbjct: 67 DGAGKYFL 74
>pdb|1FYR|A Chain A, Dimer Formation Through Domain Swapping In The Crystal
Structure Of The Grb2-Sh2 Ac-Pyvnv Complex
pdb|1FYR|B Chain B, Dimer Formation Through Domain Swapping In The Crystal
Structure Of The Grb2-Sh2 Ac-Pyvnv Complex
pdb|1FYR|C Chain C, Dimer Formation Through Domain Swapping In The Crystal
Structure Of The Grb2-Sh2 Ac-Pyvnv Complex
pdb|1FYR|D Chain D, Dimer Formation Through Domain Swapping In The Crystal
Structure Of The Grb2-Sh2 Ac-Pyvnv Complex
Length = 114
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
KP W+ G + R +AE +L ++ +G F++R S S G ++LS+ V+H+ + +
Sbjct: 9 KPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHFKVLR 65
Query: 312 NSRGEFFL 319
+ G++FL
Sbjct: 66 DGAGKYFL 73
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 208 RFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWY-VGDMSRQR 266
++ K DVW+ GV+++ + CG P+G + E++ RV++G P W V D ++Q
Sbjct: 198 KYDEKCDVWSCGVILY-ILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQL 256
Query: 267 AESILKQE 274
+ +L E
Sbjct: 257 VKLMLTYE 264
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 434 LEELGSGQFGVVR--RGKWRGS-IDVAMMKEGTMSEDD----FIEEAKVMTRLQHQNLVQ 486
+++LGSG +G V + K G+ + ++K+ +++ ++E V+ +L H N+++
Sbjct: 26 VKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 85
Query: 487 LYGVCSKHRPIYIVTDTSSFRLGLLAD 513
LY R Y+V + +R G L D
Sbjct: 86 LYEFFEDKRNYYLVMEV--YRGGELFD 110
>pdb|1H92|A Chain A, Sh3 Domain Of Human Lck Tyrosine Kinase
Length = 63
Score = 42.4 bits (98), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 123 IRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKE 180
++ +V+AL+ ++ GDL EKG + +++ + E WWK + G G+IP N+V +
Sbjct: 4 LQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGE-WWKAQSLTTGQEGFIPFNFVAK 61
Score = 33.9 bits (76), Expect = 0.23, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 70 IRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
++ +V+AL+ ++ GDL EKG + +++ + E WWK +
Sbjct: 4 LQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGE-WWKAQ 44
>pdb|2A08|A Chain A, Structure Of The Yeast Yhh6 Sh3 Domain
pdb|2A08|B Chain B, Structure Of The Yeast Yhh6 Sh3 Domain
Length = 60
Score = 42.4 bits (98), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVM--DDTQEHWWKVKDKNGSVGYIPSNYVK 179
VALY F + GDL+ +KG ++ D+Q WW + NG G P+NYV+
Sbjct: 7 VALYNFAGEQPGDLAFKKGDVITILKKSDSQNDWWTGR-TNGKEGIFPANYVR 58
Score = 32.3 bits (72), Expect = 0.60, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVM--DDTQEHWW--KVKDKNGI 116
VALY F + GDL+ +KG ++ D+Q WW + K GI
Sbjct: 7 VALYNFAGEQPGDLAFKKGDVITILKKSDSQNDWWTGRTNGKEGI 51
>pdb|2IIM|A Chain A, Sh3 Domain Of Human Lck
Length = 62
Score = 42.4 bits (98), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 123 IRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKE 180
++ +V+AL+ ++ GDL EKG + +++ + E WWK + G G+IP N+V +
Sbjct: 4 LQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGE-WWKAQSLTTGQEGFIPFNFVAK 61
Score = 33.9 bits (76), Expect = 0.23, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 70 IRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
++ +V+AL+ ++ GDL EKG + +++ + E WWK +
Sbjct: 4 LQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGE-WWKAQ 44
>pdb|1UDL|A Chain A, The Solution Structure Of The Fifth Sh3 Domain Of
Intersectin 2 (Kiaa1256)
Length = 98
Score = 42.4 bits (98), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
V+A+Y + A +LS KG VM+ WW+ + NG G PSNYVK
Sbjct: 37 VIAMYDYAANNEDELSFSKGQLINVMNKDDPDWWQ-GEINGVTGLFPSNYVK 87
Score = 29.3 bits (64), Expect = 6.1, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
V+A+Y + A +LS KG VM+ WW+
Sbjct: 37 VIAMYDYAANNEDELSFSKGQLINVMNKDDPDWWQ 71
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 208 RFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW-YVGDMSRQR 266
++ K DVW+ GV+++ + CG P+G + E++ RV++G P W V D ++Q
Sbjct: 181 KYDEKCDVWSCGVILY-ILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQL 239
Query: 267 AESILKQE 274
+ +L E
Sbjct: 240 VKLMLTYE 247
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVMTRL 479
+W+I +L + E +G G+FG V G+W G + + ++ +ED F E +
Sbjct: 27 EWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQT 86
Query: 480 QHQNLVQLYGVCSKHRPIYIVT 501
+H+N+V G C + I+T
Sbjct: 87 RHENVVLFMGACMSPPHLAIIT 108
>pdb|2L3S|A Chain A, Structure Of The Autoinhibited Crk
Length = 163
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V AL+ F + DL +KG ++ D +E WW +D +G G IP YV++
Sbjct: 4 VRALFDFNGNDDEDLPFKKGDILKIRDKPEEQWWNAEDMDGKRGMIPVPYVEK 56
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIR 117
V AL+ F + DL +KG ++ D +E WW +D +G R
Sbjct: 4 VRALFDFNGNDDEDLPFKKGDILKIRDKPEEQWWNAEDMDGKR 46
>pdb|1OOT|A Chain A, Crystal Structure Of The Sh3 Domain From A S. Cerevisiae
Hypothetical 40.4 Kda Protein At 1.39 A Resolution
pdb|1SSH|A Chain A, Crystal Structure Of The Sh3 Domain From A S. Cerevisiae
Hypothetical 40.4 Kda Protein In Complex With A Peptide
Length = 60
Score = 42.0 bits (97), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVM--DDTQEHWWKVKDKNGSVGYIPSNYVK 179
PK V ALY F E GDL KG ++ D+Q WW + NG G P+NYV+
Sbjct: 4 PKAV-ALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGR-VNGREGIFPANYVE 58
Score = 34.3 bits (77), Expect = 0.17, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 72 PKVVVALYPFKAIEGGDLSLEKGAEYEVM--DDTQEHWW--KVKDKNGI 116
PK V ALY F E GDL KG ++ D+Q WW +V + GI
Sbjct: 4 PKAV-ALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGRVNGREGI 51
>pdb|2ROL|A Chain A, Structural Basis Of Pxxdy Motif Recognition In Sh3 Binding
Length = 64
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSN 176
K V+ Y F+A +LS+++ EV+DD+++ WWKV+D G GY+P N
Sbjct: 8 KWVLCNYDFQARNSSELSVKQRDVLEVLDDSRK-WWKVRDPAGQEGYVPYN 57
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
K V+ Y F+A +LS+++ EV+DD+++ WWKV+D G
Sbjct: 8 KWVLCNYDFQARNSSELSVKQRDVLEVLDDSRK-WWKVRDPAG 49
>pdb|1KIK|A Chain A, Sh3 Domain Of Lymphocyte Specific Kinase (Lck)
Length = 57
Score = 42.0 bits (97), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKE 180
+V+AL+ ++ GDL EKG + +++ + E WWK + G G+IP N+V +
Sbjct: 2 LVIALHSYEPSHDGDLGFEKGEQLRILEQSGE-WWKAQSLTTGQEGFIPFNFVAK 55
Score = 33.5 bits (75), Expect = 0.31, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
+V+AL+ ++ GDL EKG + +++ + E WWK +
Sbjct: 2 LVIALHSYEPSHDGDLGFEKGEQLRILEQSGE-WWKAQ 38
>pdb|3REA|B Chain B, Hiv-1 Nef Protein In Complex With Engineered Hck-Sh3
Domain
pdb|3REA|D Chain D, Hiv-1 Nef Protein In Complex With Engineered Hck-Sh3
Domain
Length = 61
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
+VVALY + + DLS +KG + V++++ E WWK + GYIPSNYV
Sbjct: 5 IVVALYDYVSWSPDDLSFQKGDQMVVLEESGE-WWKARSLATRKEGYIPSNYV 56
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
+VVALY + + DLS +KG + V++++ E WWK +
Sbjct: 5 IVVALYDYVSWSPDDLSFQKGDQMVVLEESGE-WWKAR 41
>pdb|3EHQ|A Chain A, Crystal Structure Of Human Osteoclast Stimulating Factor
pdb|3EHQ|B Chain B, Crystal Structure Of Human Osteoclast Stimulating Factor
pdb|3EHR|A Chain A, Crystal Structure Of Human Osteoclast Stimulating Factor
pdb|3EHR|B Chain B, Crystal Structure Of Human Osteoclast Stimulating Factor
Length = 222
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
KV ALY F+ +L +E+G + D + +WWK K G G IPSNYV E+
Sbjct: 15 KVFRALYTFEPRTPDELYIEEGDIIYITDXSDTNWWKGTSK-GRTGLIPSNYVAEQ 69
>pdb|1X2K|A Chain A, Solution Structure Of The Sh3 Domain Of Human Osteoclast
Stimulating Factor 1 (Ostf1)
Length = 68
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
KV ALY F+ +L E+G + D + +WWK K G G IPSNYV E+
Sbjct: 8 KVFRALYTFEPRTPDELYFEEGDIIYITDMSDTNWWKGTSK-GRTGLIPSNYVAEQ 62
>pdb|1BHF|A Chain A, P56lck Sh2 Domain Inhibitor Complex
pdb|1BHH|A Chain A, Free P56lck Sh2 Domain
Length = 108
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 253 KPKAWYVGDMSRQRAE-SILKQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYH 308
+P+ W+ ++SR+ AE +L + G F++R S ST G ++LS+ + + VKHY
Sbjct: 5 EPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYK 64
Query: 309 IKQNSRGEFFLSEK 322
I+ G F++S +
Sbjct: 65 IRNLDNGGFYISPR 78
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 319 LSEKHCCHSIPEVKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEF 375
LS K + + G F++R S ST G ++LS+ + + VKHY I+ G F
Sbjct: 14 LSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGF 73
Query: 376 FLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPC 409
++S + + E+V ++ + S GL +RL + PC
Sbjct: 74 YISPRITFPGLHELVRHYTNASDGLCTRL-SRPC 106
>pdb|1LCJ|A Chain A, Sh2 (Src Homology-2) Domain Of Human P56-Lck Tyrosine
Kinase Complexed With The 11 Residue Phosphotyrosyl
Peptide Epqpyeeipiyl
Length = 109
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 253 KPKAWYVGDMSRQRAE-SILKQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYH 308
+P+ W+ ++SR+ AE +L + G F++R S ST G ++LS+ + + VKHY
Sbjct: 6 EPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYK 65
Query: 309 IKQNSRGEFFLSEK 322
I+ G F++S +
Sbjct: 66 IRNLDNGGFYISPR 79
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 319 LSEKHCCHSIPEVKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEF 375
LS K + + G F++R S ST G ++LS+ + + VKHY I+ G F
Sbjct: 15 LSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGF 74
Query: 376 FLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPC 409
++S + + E+V ++ + S GL +RL + PC
Sbjct: 75 YISPRITFPGLHELVRHYTNASDGLCTRL-SRPC 107
>pdb|1ZLM|A Chain A, Crystal Structure Of The Sh3 Domain Of Human Osteoclast
Stimulating Factor
Length = 58
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
KV ALY F+ +L E+G + D + +WWK K G G IPSNYV E+
Sbjct: 4 KVFRALYTFEPRTPDELYFEEGDIIYITDMSDTNWWKGTSK-GRTGLIPSNYVAEQ 58
>pdb|1LKK|A Chain A, Human P56-Lck Tyrosine Kinase Sh2 Domain In Complex With
The Phosphotyrosyl Peptide Ac-Ptyr-Glu-Glu-Ile (Pyeei
Peptide)
Length = 105
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 253 KPKAWYVGDMSRQRAE-SILKQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYH 308
+P+ W+ ++SR+ AE +L + G F++R S ST G ++LS+ + + VKHY
Sbjct: 2 EPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYK 61
Query: 309 IKQNSRGEFFLSEK 322
I+ G F++S +
Sbjct: 62 IRNLDNGGFYISPR 75
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 319 LSEKHCCHSIPEVKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEF 375
LS K + + G F++R S ST G ++LS+ + + VKHY I+ G F
Sbjct: 11 LSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGF 70
Query: 376 FLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPC 409
++S + + E+V ++ + S GL +RL + PC
Sbjct: 71 YISPRITFPGLHELVRHYTNASDGLCTRL-SRPC 103
>pdb|2EYW|A Chain A, N-Terminal Sh3 Domain Of Ct10-Regulated Kinase
Length = 78
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V AL+ F + DL +KG + D +E WW +D G G IP YV++
Sbjct: 17 VRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK 69
Score = 33.9 bits (76), Expect = 0.22, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIR 117
V AL+ F + DL +KG + D +E WW +D G R
Sbjct: 17 VRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKR 59
>pdb|1LKL|A Chain A, Human P56-Lck Tyrosine Kinase Sh2 Domain In Complex With
The Phosphotyrosyl Peptide Ac-Ptyr-Glu-Glu-Gly (Pyeeg
Peptide)
Length = 104
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 253 KPKAWYVGDMSRQRAE-SILKQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYH 308
+P+ W+ ++SR+ AE +L + G F++R S ST G ++LS+ + + VKHY
Sbjct: 1 EPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYK 60
Query: 309 IKQNSRGEFFLSEK 322
I+ G F++S +
Sbjct: 61 IRNLDNGGFYISPR 74
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 319 LSEKHCCHSIPEVKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEF 375
LS K + + G F++R S ST G ++LS+ + + VKHY I+ G F
Sbjct: 10 LSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGF 69
Query: 376 FLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPC 409
++S + + E+V ++ + S GL +RL + PC
Sbjct: 70 YISPRITFPGLHELVRHYTNASDGLCTRL-SRPC 102
>pdb|1BHH|B Chain B, Free P56lck Sh2 Domain
Length = 103
Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 254 PKAWYVGDMSRQRAE-SILKQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHI 309
P+ W+ ++SR+ AE +L + G F++R S ST G ++LS+ + + VKHY I
Sbjct: 1 PEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKI 60
Query: 310 KQNSRGEFFLSEK 322
+ G F++S +
Sbjct: 61 RNLDNGGFYISPR 73
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 319 LSEKHCCHSIPEVKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEF 375
LS K + + G F++R S ST G ++LS+ + + VKHY I+ G F
Sbjct: 9 LSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGF 68
Query: 376 FLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPC 409
++S + + E+V ++ + S GL +RL + PC
Sbjct: 69 YISPRITFPGLHELVRHYTNASDGLCTRL-SRPC 101
>pdb|1M3C|A Chain A, Solution Structure Of A Circular Form Of The N-Terminal
Sh3 Domain (E132c, E133g, R191g Mutant) From Oncogene
Protein C-Crk
Length = 60
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V AL+ F + DL +KG + D +E WW +D G G IP YV++
Sbjct: 6 VRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK 58
Score = 33.5 bits (75), Expect = 0.27, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIR 117
V AL+ F + DL +KG + D +E WW +D G R
Sbjct: 6 VRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKR 48
>pdb|2EYZ|A Chain A, Ct10-Regulated Kinase Isoform Ii
Length = 304
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V AL+ F + DL +KG + D +E WW +D G G IP YV++
Sbjct: 137 VRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK 189
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 252 EKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIK 310
E+ +WY G +SRQ A ++L Q + G F+VR+SST G Y LS+ + V HY I
Sbjct: 8 EERSSWYWGRLSRQEAVALL-QGQRHGVFLVRDSSTSPGDYVLSVSE---NSRVSHYIIN 63
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIR 117
V AL+ F + DL +KG + D +E WW +D G R
Sbjct: 137 VRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKR 179
>pdb|1WXT|A Chain A, Solution Structure Of The Sh3 Domain Of Human Hypothetical
Protein Flj21522
Length = 68
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 131 LYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
LY F+A +L++ +G + EV+D ++ WW VK++ G GYIPSN ++
Sbjct: 13 LYEFEARNPRELTVVQGEKLEVLDHSK-RWWLVKNEAGRSGYIPSNILE 60
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 78 LYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRK--PDQMIRP 125
LY F+A +L++ +G + EV+D ++ WW VK++ G P ++ P
Sbjct: 13 LYEFEARNPRELTVVQGEKLEVLDHSK-RWWLVKNEAGRSGYIPSNILEP 61
>pdb|1M3B|A Chain A, Solution Structure Of A Circular Form Of The N-Terminal
Sh3 Domain (A134c, E135g, R191g Mutant) From Oncogene
Protein C-Crk
Length = 58
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V AL+ F + DL +KG + D +E WW +D G G IP YV++
Sbjct: 4 VRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK 56
Score = 33.5 bits (75), Expect = 0.29, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIR 117
V AL+ F + DL +KG + D +E WW +D G R
Sbjct: 4 VRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKR 46
>pdb|1M30|A Chain A, Solution Structure Of N-Terminal Sh3 Domain From Oncogene
Protein C-Crk
Length = 58
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V AL+ F + DL +KG + D +E WW +D G G IP YV++
Sbjct: 4 VRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK 56
Score = 33.5 bits (75), Expect = 0.29, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIR 117
V AL+ F + DL +KG + D +E WW +D G R
Sbjct: 4 VRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKR 46
>pdb|1B07|A Chain A, Crk Sh3 Domain Complexed With Peptoid Inhibitor
Length = 65
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V AL+ F + DL +KG + D +E WW +D G G IP YV++
Sbjct: 6 VRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK 58
Score = 33.5 bits (75), Expect = 0.29, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIR 117
V AL+ F + DL +KG + D +E WW +D G R
Sbjct: 6 VRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKR 48
>pdb|2EYY|A Chain A, Ct10-Regulated Kinase Isoform I
Length = 204
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V AL+ F + DL +KG + D +E WW +D G G IP YV++
Sbjct: 137 VRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK 189
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 252 EKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIK 310
E+ +WY G +SRQ A ++L Q + G F+VR+SST G Y LS+ + V HY I
Sbjct: 8 EERSSWYWGRLSRQEAVALL-QGQRHGVFLVRDSSTSPGDYVLSVSE---NSRVSHYIIN 63
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIR 117
V AL+ F + DL +KG + D +E WW +D G R
Sbjct: 137 VRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKR 179
>pdb|1M3A|A Chain A, Solution Structure Of A Circular Form Of The Truncated N-
Terminal Sh3 Domain From Oncogene Protein C-Crk
Length = 57
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V AL+ F + DL +KG + D +E WW +D G G IP YV++
Sbjct: 3 VRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK 55
Score = 33.5 bits (75), Expect = 0.29, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIR 117
V AL+ F + DL +KG + D +E WW +D G R
Sbjct: 3 VRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKR 45
>pdb|1CJ1|A Chain A, Growth Factor Receptor Binding Protein Sh2 Domain (Human)
Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|B Chain B, Growth Factor Receptor Binding Protein Sh2 Domain (Human)
Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|C Chain C, Growth Factor Receptor Binding Protein Sh2 Domain (Human)
Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|D Chain D, Growth Factor Receptor Binding Protein Sh2 Domain (Human)
Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|E Chain E, Growth Factor Receptor Binding Protein Sh2 Domain (Human)
Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|F Chain F, Growth Factor Receptor Binding Protein Sh2 Domain (Human)
Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|G Chain G, Growth Factor Receptor Binding Protein Sh2 Domain (Human)
Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|H Chain H, Growth Factor Receptor Binding Protein Sh2 Domain (Human)
Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|I Chain I, Growth Factor Receptor Binding Protein Sh2 Domain (Human)
Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|J Chain J, Growth Factor Receptor Binding Protein Sh2 Domain (Human)
Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|K Chain K, Growth Factor Receptor Binding Protein Sh2 Domain (Human)
Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|L Chain L, Growth Factor Receptor Binding Protein Sh2 Domain (Human)
Complexed With A Phosphotyrosyl Derivative
Length = 96
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 254 PKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQN 312
P W+ G + R +AE +L ++ +G F++R S S G ++LS+ V+H+ + ++
Sbjct: 1 PHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHFKVLRD 57
Query: 313 SRGEFFL 319
G++FL
Sbjct: 58 GAGKYFL 64
>pdb|1CKA|A Chain A, Structural Basis For The Specific Interaction Of Lysine-
Containing Proline-Rich Peptides With The N-Terminal Sh3
Domain Of C-Crk
pdb|1CKB|A Chain A, Structural Basis For The Specific Interaction Of Lysine-
Containing Proline-Rich Peptides With The N-Terminal Sh3
Domain Of C-Crk
Length = 57
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V AL+ F + DL +KG + D +E WW +D G G IP YV++
Sbjct: 4 VRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK 56
Score = 33.5 bits (75), Expect = 0.30, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIR 117
V AL+ F + DL +KG + D +E WW +D G R
Sbjct: 4 VRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKR 46
>pdb|2DVJ|A Chain A, Phosphorylated Crk-Ii
Length = 230
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V AL+ F + DL +KG + D +E WW +D G G IP YV++
Sbjct: 139 VRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK 191
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 252 EKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIK 310
E+ +WY G +SRQ A ++L Q + G F+VR+SST G Y LS+ + V HY I
Sbjct: 10 EERSSWYWGRLSRQEAVALL-QGQRHGVFLVRDSSTSPGDYVLSVSE---NSRVSHYIIN 65
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIR 117
V AL+ F + DL +KG + D +E WW +D G R
Sbjct: 139 VRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKR 181
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD----FIEEAKVMTRLQHQN 483
P++L+ E LG G FG + R + +V +MKE +++ F++E KVM L+H N
Sbjct: 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPN 68
Query: 484 LVQLYGVCSKHRPIYIVTD 502
+++ GV K + + +T+
Sbjct: 69 VLKFIGVLYKDKRLNFITE 87
>pdb|1JYQ|A Chain A, Xray Structure Of Grb2 Sh2 Domain Complexed With A Highly
Affine Phospho Peptide
pdb|1JYQ|B Chain B, Xray Structure Of Grb2 Sh2 Domain Complexed With A Highly
Affine Phospho Peptide
pdb|1JYR|A Chain A, Xray Structure Of Grb2 Sh2 Domain Complexed With A
Phosphorylated Peptide
pdb|1JYU|A Chain A, Xray Structure Of Grb2 Sh2 Domain
Length = 96
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 256 AWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
AW+ G + R +AE +L ++ +G F++R S S G ++LS+ V+H+ + ++
Sbjct: 4 AWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHFKVLRDGA 60
Query: 315 GEFFL 319
G++FL
Sbjct: 61 GKYFL 65
>pdb|3HHM|B Chain B, Crystal Structure Of P110alpha H1047r Mutant In Complex
With Nish2 Of P85alpha And The Drug Wortmannin
pdb|3HIZ|B Chain B, Crystal Structure Of P110alpha H1047r Mutant In Complex
With Nish2 Of P85alpha
Length = 373
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
K W VG +R +AE++L+ + ++G F+VR SS +G Y S+ V VKH I + +
Sbjct: 301 KTWNVGSSNRNKAENLLRGK-RDGTFLVRESSKQGCYACSV---VVDGEVKHCVINKTAT 356
Query: 315 GEFFLSEKHCCHSIPEV 331
G F + S+ E+
Sbjct: 357 GYGFAEPYNLYSSLKEL 373
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK--GLYTLSLYTKVPHPHVKHYH 308
WY GD+SR+ L+ + +G F+VR++STK G YTL+L + +K +H
Sbjct: 12 WYWGDISREEVNEKLR-DTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFH 64
>pdb|1FBZ|A Chain A, Structure-Based Design Of A Novel, Osteoclast-Selective,
Nonpeptide Src Sh2 Inhibitor With In Vivo
Anti-Resorptive Activity
pdb|1FBZ|B Chain B, Structure-Based Design Of A Novel, Osteoclast-Selective,
Nonpeptide Src Sh2 Inhibitor With In Vivo
Anti-Resorptive Activity
Length = 104
Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 253 KPKAWYVGDMSRQRAE-SILKQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYH 308
+P+ W+ ++SR+ AE +L + G F++R S ST G + LS+ + + VKHY
Sbjct: 1 EPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFCLSVRDFDQNQGEVVKHYK 60
Query: 309 IKQNSRGEFFLSEK 322
I+ G F++S +
Sbjct: 61 IRNLDNGGFYISPR 74
Score = 40.0 bits (92), Expect = 0.003, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 319 LSEKHCCHSIPEVKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEF 375
LS K + + G F++R S ST G + LS+ + + VKHY I+ G F
Sbjct: 10 LSRKDAERQLLAPGNTHGSFLIRESESTAGSFCLSVRDFDQNQGEVVKHYKIRNLDNGGF 69
Query: 376 FLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPC 409
++S + + E+V ++ + S GL +RL + PC
Sbjct: 70 YISPRITFPGLHELVRHYTNASDGLCTRL-SRPC 102
>pdb|1IJR|A Chain A, Crystal Structure Of Lck Sh2 Complexed With Nonpeptide
Phosphotyrosine Mimetic
Length = 104
Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 254 PKAWYVGDMSRQRAE-SILKQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHI 309
P+ W+ ++SR+ AE +L + G F++R S ST G + LS+ + + VKHY I
Sbjct: 2 PEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFCLSVRDFDQNQGEVVKHYKI 61
Query: 310 KQNSRGEFFLSEK 322
+ G F++S +
Sbjct: 62 RNLDNGGFYISPR 74
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 319 LSEKHCCHSIPEVKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEF 375
LS K + + G F++R S ST G + LS+ + + VKHY I+ G F
Sbjct: 10 LSRKDAERQLLAPGNTHGSFLIRESESTAGSFCLSVRDFDQNQGEVVKHYKIRNLDNGGF 69
Query: 376 FLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPC 409
++S + + E+V ++ + S GL +RL + PC
Sbjct: 70 YISPRITFPGLHELVRHYTNASDGLCTRL-SRPC 102
>pdb|1BK2|A Chain A, A-Spectrin Sh3 Domain D48g Mutant
Length = 57
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++V+ALY ++ +++++KG +++ T + WWKV + NG G++P+ YVK+
Sbjct: 2 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNGRQGFVPAAYVKK 55
Score = 28.5 bits (62), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 26/39 (66%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
++V+ALY ++ +++++KG +++ T + WWKV+
Sbjct: 2 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVE 40
>pdb|1OEB|A Chain A, MonaGADS SH3C DOMAIN
pdb|1OEB|B Chain B, MonaGADS SH3C DOMAIN
pdb|2W10|A Chain A, Mona Sh3c In Complex
pdb|2W10|B Chain B, Mona Sh3c In Complex
Length = 62
Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
ALY F+A+E +L G EV+D + WW + N +G P+NYV
Sbjct: 10 ALYDFEALEEDELGFRSGEVVEVLDSSNPSWWTGRLHN-KLGLFPANYV 57
Score = 33.1 bits (74), Expect = 0.38, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 77 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW 108
ALY F+A+E +L G EV+D + WW
Sbjct: 10 ALYDFEALEEDELGFRSGEVVEVLDSSNPSWW 41
>pdb|2VVK|A Chain A, Grb2 Sh3c (1)
Length = 56
Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
V AL+ F E G+L +G VMD++ +WWK +G G P NYV
Sbjct: 3 VQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWK-GACHGQTGMFPRNYV 52
Score = 33.9 bits (76), Expect = 0.21, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
V AL+ F E G+L +G VMD++ +WWK
Sbjct: 3 VQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWK 37
>pdb|2F2X|A Chain A, Alpha-Spectrin Sh3 Domain R21g Mutant
Length = 62
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++V+ALY ++ G+++++KG +++ T + WWKV + N G++P+ YVK+
Sbjct: 7 ELVLALYDYQEKSPGEVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKK 60
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNGI 116
++V+ALY ++ G+++++KG +++ T + WWKV+ D+ G
Sbjct: 7 ELVLALYDYQEKSPGEVTMKKGDILTLLNSTNKDWWKVEVNDRQGF 52
>pdb|1GCQ|A Chain A, Crystal Structure Of Vav And Grb2 Sh3 Domains
pdb|1GCQ|B Chain B, Crystal Structure Of Vav And Grb2 Sh3 Domains
Length = 61
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
V AL+ F E G+L +G VMD++ +WWK +G G P NYV
Sbjct: 5 VQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWK-GACHGQTGMFPRNYV 54
Score = 33.9 bits (76), Expect = 0.22, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
V AL+ F E G+L +G VMD++ +WWK
Sbjct: 5 VQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWK 39
>pdb|2D0N|A Chain A, Crystal Structure Of The C-Terminal Sh3 Domain Of The
Adaptor Protein Gads In Complex With Slp-76 Motif
Peptide Reveals A Unique Sh3-Sh3 Interaction
pdb|2D0N|C Chain C, Crystal Structure Of The C-Terminal Sh3 Domain Of The
Adaptor Protein Gads In Complex With Slp-76 Motif
Peptide Reveals A Unique Sh3-Sh3 Interaction
Length = 59
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
ALY F+A+E +L G EV+D + WW + N +G P+NYV
Sbjct: 7 ALYDFEALEEDELGFRSGEVVEVLDSSNPSWWTGRLHN-KLGLFPANYV 54
Score = 33.1 bits (74), Expect = 0.40, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 77 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW 108
ALY F+A+E +L G EV+D + WW
Sbjct: 7 ALYDFEALEEDELGFRSGEVVEVLDSSNPSWW 38
>pdb|1UTI|A Chain A, MonaGADS SH3C IN COMPLEX WITH HPK DERIVED PEPTIDE
Length = 58
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
ALY F+A+E +L G EV+D + WW + N +G P+NYV
Sbjct: 6 ALYDFEALEEDELGFRSGEVVEVLDSSNPSWWTGRLHN-KLGLFPANYV 53
Score = 33.1 bits (74), Expect = 0.40, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 77 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW 108
ALY F+A+E +L G EV+D + WW
Sbjct: 6 ALYDFEALEEDELGFRSGEVVEVLDSSNPSWW 37
>pdb|1H3H|A Chain A, Structural Basis For Specific Recognition Of An
Rxxk-Containing Slp-76 Peptide By The Gads C-Terminal
Sh3 Domain
Length = 60
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
ALY F+A+E +L G EV+D + WW + N +G P+NYV
Sbjct: 8 ALYDFEALEEDELGFRSGEVVEVLDSSNPSWWTGRLHN-KLGLFPANYV 55
Score = 33.1 bits (74), Expect = 0.41, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 77 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW 108
ALY F+A+E +L G EV+D + WW
Sbjct: 8 ALYDFEALEEDELGFRSGEVVEVLDSSNPSWW 39
>pdb|1NM7|A Chain A, Solution Structure Of The Scpex13p Sh3 Domain
Length = 69
Score = 40.0 bits (92), Expect = 0.003, Method: Composition-based stats.
Identities = 13/20 (65%), Positives = 18/20 (90%)
Query: 160 WWKVKDKNGSVGYIPSNYVK 179
WWKV+ KNG++GYIP NY++
Sbjct: 48 WWKVRTKNGNIGYIPYNYIE 67
>pdb|1IO6|A Chain A, Growth Factor Receptor-Bound Protein 2 (Grb2) C-Terminal
Sh3 Domain Complexed With A Ligand Peptide (Nmr,
Minimized Mean Structure)
pdb|1GFC|A Chain A, Solution Structure And Ligand-Binding Site Of The C-
Terminal Sh3 Domain Of Grb2
pdb|1GFD|A Chain A, Solution Structure And Ligand-Binding Site Of The C-
Terminal Sh3 Domain Of Grb2
Length = 59
Score = 40.0 bits (92), Expect = 0.003, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
V AL+ F E G+L +G VMD++ +WWK +G G P NYV
Sbjct: 5 VQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWK-GACHGQTGMFPRNYV 54
Score = 33.9 bits (76), Expect = 0.24, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
V AL+ F E G+L +G VMD++ +WWK
Sbjct: 5 VQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWK 39
>pdb|1OO3|A Chain A, P395s Mutant Of The P85 Regulatory Subunit Of The N-
Terminal Src Homology 2 Domain Of Pi3-Kinase
pdb|1OO4|A Chain A, P395s Mutant Of The P85 Regulatory Subunit Of The N-
Terminal Src Homology 2 Domain Of Pi3-Kinase Complexed
To A Peptide Derived From Pdgfr
Length = 111
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK--GLYTLSLYTKVPHPHVKHYHIKQNSR 314
WY GD+SR+ L+ + +G F+VR++STK G YTL+L + +K +H
Sbjct: 13 WYWGDISREEVNEKLR-DTADGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFH----RD 67
Query: 315 GEFFLSEKHCCHSIPEV 331
G++ S+ +S+ E+
Sbjct: 68 GKYGFSDSLTFNSVVEL 84
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID-----VAMMKEGTMSED---DFIE 471
SH+ + + L L++LG G FG V ++ D VA+ K +E+ DF
Sbjct: 19 SHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 78
Query: 472 EAKVMTRLQHQNLVQLYGVC 491
E +++ LQH N+V+ GVC
Sbjct: 79 EIEILKSLQHDNIVKYKGVC 98
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
+GSL +YL++H+ + + LL Q+CKGM YL YIHR+
Sbjct: 115 YGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYLGTKRYIHRD 157
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 20/24 (83%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFT 227
L ++FS SDVW++GV+++E+FT
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID-----VAMMKEGTMSED---DFIE 471
SH+ + + L L++LG G FG V ++ D VA+ K +E+ DF
Sbjct: 19 SHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 78
Query: 472 EAKVMTRLQHQNLVQLYGVC 491
E +++ LQH N+V+ GVC
Sbjct: 79 EIEILKSLQHDNIVKYKGVC 98
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
+GSL +YL++H+ + + LL Q+CKGM YL YIHR+
Sbjct: 115 YGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYLGTKRYIHRD 157
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 20/24 (83%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFT 227
L ++FS SDVW++GV+++E+FT
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|1AOJ|A Chain A, The Sh3 Domain Of Eps8 Exists As A Novel Intertwined Dimer
pdb|1AOJ|B Chain B, The Sh3 Domain Of Eps8 Exists As A Novel Intertwined Dimer
pdb|1I07|A Chain A, Eps8 Sh3 Domain Intertwined Dimer
pdb|1I07|B Chain B, Eps8 Sh3 Domain Intertwined Dimer
pdb|1I0C|A Chain A, Eps8 Sh3 Closed Monomer
pdb|1I0C|B Chain B, Eps8 Sh3 Closed Monomer
Length = 60
Score = 40.0 bits (92), Expect = 0.003, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 132 YPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSN 176
Y F A +LS+ K E++DD ++ WWKV++ +G G++P+N
Sbjct: 8 YDFVARNSSELSVMKDDVLEILDDRRQ-WWKVRNASGDSGFVPNN 51
Score = 30.8 bits (68), Expect = 1.9, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 79 YPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
Y F A +LS+ K E++DD ++ WWKV++ +G
Sbjct: 8 YDFVARNSSELSVMKDDVLEILDDRRQ-WWKVRNASG 43
>pdb|3JV3|A Chain A, Structure Of Sh3e-Dh Unit Of Murine Intersectin-1l
pdb|3JV3|B Chain B, Structure Of Sh3e-Dh Unit Of Murine Intersectin-1l
Length = 283
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
V+ +Y + A +L+ KG V++ WWK + +G VG PSNYVK
Sbjct: 5 VIGMYDYTAQNDDELAFSKGQIINVLNKEDPDWWK-GEVSGQVGLFPSNYVK 55
>pdb|1BFI|A Chain A, Solution Structure Of The C-Terminal Sh2 Domain Of The
P85alpha Regulatory Subunit Of Phosphoinositide
3-Kinase, Nmr, 30 Structures
pdb|1BFJ|A Chain A, Solution Structure Of The C-Terminal Sh2 Domain Of The
P85alpha Regulatory Subunit Of Phosphoinositide
3-Kinase, Nmr, Minimized Average Structure
Length = 112
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
K W VG +R +AE++L+ + ++G F+VR SS +G Y S+ V VKH I + +
Sbjct: 10 KTWNVGSSNRNKAENLLRGK-RDGTFLVRESSKQGCYACSV---VVDGEVKHCVINKTAT 65
Query: 315 GEFF 318
G F
Sbjct: 66 GYGF 69
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYH 393
++G F+VR SS +G Y S+ V VKH I + + G F + S+ E+V ++
Sbjct: 30 RDGTFLVRESSKQGCYACSV---VVDGEVKHCVINKTATGYGFAEPYNLYSSLKELVLHY 86
Query: 394 RHNS 397
+H S
Sbjct: 87 QHTS 90
>pdb|2F2W|A Chain A, Alpha-Spectrin Sh3 Domain R21a Mutant
pdb|2JM8|A Chain A, R21a Spc-Sh3 Free
pdb|2JM9|A Chain A, R21a Spc-Sh3 Bound
pdb|2JMA|A Chain A, R21a Spc-Sh3:p41 Complex
Length = 62
Score = 40.0 bits (92), Expect = 0.003, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++V+ALY ++ +++++KG +++ T + WWKV + N G++P+ YVK+
Sbjct: 7 ELVLALYDYQEKSPAEVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKK 60
Score = 31.6 bits (70), Expect = 1.2, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNG 115
++V+ALY ++ +++++KG +++ T + WWKV+ D+ G
Sbjct: 7 ELVLALYDYQEKSPAEVTMKKGDILTLLNSTNKDWWKVEVNDRQG 51
>pdb|1YNZ|A Chain A, Sh3 Domain Of Yeast Pin3
pdb|1ZX6|A Chain A, High-Resolution Crystal Structure Of Yeast Pin3 Sh3 Domain
Length = 58
Score = 40.0 bits (92), Expect = 0.003, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
V ALY F + GDL L+ G + ++++ W+K NG G P+NYVK
Sbjct: 5 VEALYQFDPQQDGDLGLKPGDKVQLLEKLSPEWYK-GSCNGRTGIFPANYVK 55
Score = 28.5 bits (62), Expect = 8.3, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
V ALY F + GDL L+ G + ++++ W+K
Sbjct: 5 VEALYQFDPQQDGDLGLKPGDKVQLLEKLSPEWYK 39
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 436 ELGSGQFGVVRRGKWRGSIDVAMMKEGTMSE-------DDFIEEAKVMTRLQHQNLVQLY 488
++G G FGVV +G + + VA+ K M + F +E KVM + QH+NLV+L
Sbjct: 38 KMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 489 GVCSKHRPIYIV 500
G S + +V
Sbjct: 97 GFSSDGDDLCLV 108
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 436 ELGSGQFGVVRRGKWRGSIDVAMMKEGTMSE-------DDFIEEAKVMTRLQHQNLVQLY 488
++G G FGVV +G + + VA+ K M + F +E KVM + QH+NLV+L
Sbjct: 38 KMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 489 GVCSKHRPIYIV 500
G S + +V
Sbjct: 97 GFSSDGDDLCLV 108
>pdb|1QAD|A Chain A, Crystal Structure Of The C-Terminal Sh2 Domain Of The P85
Alpha Regulatory Subunit Of Phosphoinositide 3-Kinase:
An Sh2 Domain Mimicking Its Own Substrate
Length = 111
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
K W VG +R +AE++L+ + ++G F+VR SS +G Y S+ V VKH I + +
Sbjct: 9 KTWNVGSSNRNKAENLLRGK-RDGTFLVRESSKQGCYACSV---VVDGEVKHCVINKTAT 64
Query: 315 GEFF 318
G F
Sbjct: 65 GYGF 68
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYH 393
++G F+VR SS +G Y S+ V VKH I + + G F + S+ E+V ++
Sbjct: 29 RDGTFLVRESSKQGCYACSV---VVDGEVKHCVINKTATGYGFAEPYNLYSSLKELVLHY 85
Query: 394 RHNS 397
+H S
Sbjct: 86 QHTS 89
>pdb|3HAJ|A Chain A, Crystal Structure Of Human Pacsin2 F-Bar Domain (P212121
Lattice)
pdb|3HAJ|B Chain B, Crystal Structure Of Human Pacsin2 F-Bar Domain (P212121
Lattice)
Length = 486
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 101 DDTQEHWWKVKDKNGIRKP---DQMIRPKVVV-ALYPFKAIEGGDLSLEKGAEYEVMDDT 156
DD + + D NG P D +V V ALY ++ E +LS + G E M+D
Sbjct: 400 DDESNNPFSSTDANGDSNPFDDDATSGTEVRVRALYDYEGQEHDELSFKAGDELTKMEDE 459
Query: 157 QEHWW-KVKDKNGSVGYIPSNYVK 179
E W K + NG VG P+NYV+
Sbjct: 460 DEQGWCKGRLDNGQVGLYPANYVE 483
>pdb|2V1R|A Chain A, Yeast Pex13 Sh3 Domain Complexed With A Peptide From Pex14
At 2.1 A Resolution
pdb|2V1R|B Chain B, Yeast Pex13 Sh3 Domain Complexed With A Peptide From Pex14
At 2.1 A Resolution
Length = 80
Score = 39.7 bits (91), Expect = 0.004, Method: Composition-based stats.
Identities = 13/20 (65%), Positives = 18/20 (90%)
Query: 160 WWKVKDKNGSVGYIPSNYVK 179
WWKV+ KNG++GYIP NY++
Sbjct: 55 WWKVRTKNGNIGYIPYNYIE 74
>pdb|4GBQ|A Chain A, Solution Nmr Structure Of The Grb2 N-Terminal Sh3 Domain
Complexed With A Ten-Residue Peptide Derived From Sos
Direct Refinement Against Noes, J-Couplings, And 1h And
13c Chemical Shifts, 15 Structures
pdb|3GBQ|A Chain A, Solution Nmr Structure Of The Grb2 N-Terminal Sh3 Domain
Complexed With A Ten-Residue Peptide Derived From Sos
Direct Refinement Against Noes, J-Couplings, And 1h And
13c Chemical Shifts, Minimized Average Structure
pdb|2GBQ|A Chain A, Solution Nmr Structure Of The Grb2 N-Terminal Sh3 Domain
Complexed With A Ten-Residue Peptide Derived From Sos
Direct Refinement Against Noes, J-Couplings, And 1h And
13c Chemical Shifts, 15 Structures
pdb|1GBQ|A Chain A, Solution Nmr Structure Of The Grb2 N-Terminal Sh3 Domain
Complexed With A Ten-Residue Peptide Derived From Sos
Direct Refinement Against Noes, J-Couplings, And 1h And
13c Chemical Shifts, Minimized Average Structure
pdb|1GBR|A Chain A, Orientation Of Peptide Fragments From Sos Proteins Bound
To The N-Terminal Sh3 Domain Of Grb2 Determined By Nmr
Spectroscopy
Length = 74
Score = 39.7 bits (91), Expect = 0.004, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
+A Y FKA +LS ++G +V+++ + W + NG G+IP NY++ K
Sbjct: 13 IAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMK 65
>pdb|1H9O|A Chain A, Phosphatidylinositol 3-Kinase, P85-Alpha Subunit:
C-Terminal Sh2 Domain Complexed With A Tyr751
Phosphopeptide From The Pdgf Receptor, Crystal Structure
At 1.79 A
pdb|1PIC|A Chain A, Phosphatidylinositol 3-Kinase, P85-Alpha Subunit: C-
Terminal Sh2 Domain Complexed With A Tyr751
Phosphopeptide From The Pdgf Receptor, Nmr, Minimized
Mean Structure
Length = 112
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
K W VG +R +AE++L+ + ++G F+VR SS +G Y S+ V VKH I + +
Sbjct: 10 KTWNVGSSNRNKAENLLRGK-RDGTFLVRESSKQGCYACSV---VVDGEVKHCVINKTAT 65
Query: 315 GEFF 318
G F
Sbjct: 66 GYGF 69
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYH 393
++G F+VR SS +G Y S+ V VKH I + + G F + S+ E+V ++
Sbjct: 30 RDGTFLVRESSKQGCYACSV---VVDGEVKHCVINKTATGYGFAEPYNLYSSLKELVLHY 86
Query: 394 RHNS 397
+H S
Sbjct: 87 QHTS 90
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 436 ELGSGQFGVVRRGKWRGSIDVAMMKEGTMSE-------DDFIEEAKVMTRLQHQNLVQLY 488
++G G FGVV +G + + VA+ K M + F +E KVM + QH+NLV+L
Sbjct: 32 KMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 90
Query: 489 GVCSKHRPIYIV 500
G S + +V
Sbjct: 91 GFSSDGDDLCLV 102
>pdb|2YUN|A Chain A, Solution Structure Of The Sh3 Domain Of Human Nostrin
Length = 79
Score = 39.7 bits (91), Expect = 0.004, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
ALY F+A + +L+LEKG + + +E WW NG G+ P+ YV+E
Sbjct: 12 ALYSFQARQDDELNLEKGDIVIIHEKKEEGWW-FGSLNGKKGHFPAAYVEE 61
Score = 30.4 bits (67), Expect = 2.4, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 77 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW 108
ALY F+A + +L+LEKG + + +E WW
Sbjct: 12 ALYSFQARQDDELNLEKGDIVIIHEKKEEGWW 43
>pdb|1UHC|A Chain A, Solution Structure Of Rsgi Ruh-002, A Sh3 Domain Of
Kiaa1010 Protein [homo Sapiens]
Length = 79
Score = 39.7 bits (91), Expect = 0.004, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVM---DDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
+V A+Y FKA +LS+ + +++ D T W + + NG GY+PSNY+++ E
Sbjct: 14 QVYFAVYTFKARNPNELSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNYIRKTE 73
>pdb|2CT4|A Chain A, Solution Strutcure Of The Sh3 Domain Of The Cdc42-
Interacting Protein 4
Length = 70
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVKDKNGSVGYIPSNYVK 179
VA+Y F+ G +S+ +G + +M+ D + W +V+ K G GY+P++Y++
Sbjct: 11 VAIYHFEGSSEGTISMAEGEDLSLMEEDKGDGWTRVRRKEGGEGYVPTSYLR 62
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID-----VAMMKEGTMSED---DFIE 471
S D + + L L++LG G FG V ++ D VA+ K +E+ DF
Sbjct: 2 SRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 61
Query: 472 EAKVMTRLQHQNLVQLYGVC 491
E +++ LQH N+V+ GVC
Sbjct: 62 EIEILKSLQHDNIVKYKGVC 81
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
+GSL +YL++H+ + + LL Q+CKGM YL YIHR
Sbjct: 98 YGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYLGTKRYIHR 139
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 20/24 (83%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFT 227
L ++FS SDVW++GV+++E+FT
Sbjct: 190 LTESKFSVASDVWSFGVVLYELFT 213
>pdb|1FU5|A Chain A, Nmr Structure Of The N-Sh2 Domain Of The P85 Subunit Of
Pi3- Kinase Complexed To A Doubly Phosphorylated Peptide
Derived From Polyomavirus Middle T Antigen
pdb|1FU6|A Chain A, Nmr Structure Of The N-Sh2 Domain Of The P85 Subunit Of
Pi3- Kinase
Length = 111
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK--GLYTLSLYTKVPHPHVKHYHIKQNSR 314
WY GD+SR+ L+ + +G F+VR++STK G YTL+L + +K +H
Sbjct: 13 WYWGDISREEVNEKLR-DTADGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFH----RD 67
Query: 315 GEFFLSEKHCCHSIPEV 331
G++ S+ +S+ E+
Sbjct: 68 GKYGFSDPLTFNSVVEL 84
>pdb|1GHU|A Chain A, Nmr Solution Structure Of Growth Factor Receptor-Bound
Protein 2 (Grb2) Sh2 Domain, 24 Structures
Length = 107
Score = 39.3 bits (90), Expect = 0.005, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 256 AWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
+W+ G + R +AE +L ++ +G F++R S S G ++LS+ V+H+ + ++
Sbjct: 2 SWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHFKVLRDGA 58
Query: 315 GEFFL 319
G++FL
Sbjct: 59 GKYFL 63
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKPK 255
++ +SDVW+YG+ +WE+F+ G PY G +++ ++ G + P+
Sbjct: 247 YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 294
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGT--MSEDDFIEE 472
KWE L + LG+G FG V G ++ V M+K + + E
Sbjct: 40 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSE 99
Query: 473 AKVMTRL-QHQNLVQLYGVCSKHRPIYIVTD 502
KV++ L H N+V L G C+ P ++T+
Sbjct: 100 LKVLSYLGNHMNIVNLLGACTIGGPTLVITE 130
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 15/60 (25%)
Query: 3 HGSLLNYLRRHENTL---------------GGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
+G LLN+LRR ++ ++ LL QV KGMA+L N IHR+
Sbjct: 134 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRD 193
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKPK 255
++ +SDVW+YG+ +WE+F+ G PY G +++ ++ G + P+
Sbjct: 247 YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 294
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 11/91 (12%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--DVAMMKEGTM--------SEDDFIEE 472
KWE L + LG+G FG V G I D AM M + + E
Sbjct: 40 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSE 99
Query: 473 AKVMTRL-QHQNLVQLYGVCSKHRPIYIVTD 502
KV++ L H N+V L G C+ P ++T+
Sbjct: 100 LKVLSYLGNHMNIVNLLGACTIGGPTLVITE 130
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 15/60 (25%)
Query: 3 HGSLLNYLRRHENTL---------------GGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
+G LLN+LRR ++ ++ LL QV KGMA+L N IHR+
Sbjct: 134 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRD 193
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKPK 255
++ +SDVW+YG+ +WE+F+ G PY G +++ ++ G + P+
Sbjct: 224 YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 271
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 11/91 (12%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--DVAMMKEGTM--------SEDDFIEE 472
KWE L + LG+G FG V G I D AM M + + E
Sbjct: 17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSE 76
Query: 473 AKVMTRL-QHQNLVQLYGVCSKHRPIYIVTD 502
KV++ L H N+V L G C+ P ++T+
Sbjct: 77 LKVLSYLGNHMNIVNLLGACTIGGPTLVITE 107
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 15/60 (25%)
Query: 3 HGSLLNYLRRHENTL---------------GGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
+G LLN+LRR ++ ++ LL QV KGMA+L N IHR+
Sbjct: 111 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRD 170
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKPK 255
++ +SDVW+YG+ +WE+F+ G PY G +++ ++ G + P+
Sbjct: 242 YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 289
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 11/91 (12%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--DVAMMKEGTM--------SEDDFIEE 472
KWE L + LG+G FG V G I D AM M + + E
Sbjct: 35 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSE 94
Query: 473 AKVMTRL-QHQNLVQLYGVCSKHRPIYIVTD 502
KV++ L H N+V L G C+ P ++T+
Sbjct: 95 LKVLSYLGNHMNIVNLLGACTIGGPTLVITE 125
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 15/60 (25%)
Query: 3 HGSLLNYLRRHENTL---------------GGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
+G LLN+LRR ++ ++ LL QV KGMA+L N IHR+
Sbjct: 129 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRD 188
>pdb|2EO3|A Chain A, Solution Structure Of The Sh2 Domain From Human Crk-Like
Protein
Length = 111
Score = 39.3 bits (90), Expect = 0.005, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 256 AWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSR 314
AWY+G +SRQ A++ L Q + G F+VR+SST G Y LS+ + V HY I
Sbjct: 20 AWYMGPVSRQEAQTRL-QGQRHGMFLVRDSSTCPGDYVLSVSE---NSRVSHYIINSLPN 75
Query: 315 GEFFLSEKHCCH 326
F + ++ H
Sbjct: 76 RRFKIGDQEFDH 87
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKPK 255
++ +SDVW+YG+ +WE+F+ G PY G +++ ++ G + P+
Sbjct: 240 YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 287
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 11/91 (12%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--DVAMMKEGTM--------SEDDFIEE 472
KWE L + LG+G FG V G I D AM M + + E
Sbjct: 33 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSE 92
Query: 473 AKVMTRL-QHQNLVQLYGVCSKHRPIYIVTD 502
KV++ L H N+V L G C+ P ++T+
Sbjct: 93 LKVLSYLGNHMNIVNLLGACTIGGPTLVITE 123
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 15/60 (25%)
Query: 3 HGSLLNYLRRHENTL---------------GGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
+G LLN+LRR ++ ++ LL QV KGMA+L N IHR+
Sbjct: 127 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRD 186
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 8/46 (17%)
Query: 4 GSLLNYLRRHENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHRE 47
GSL +YL RH ++GL LL Q+C+GMAYL +YIHR+
Sbjct: 120 GSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLHAQHYIHRD 159
>pdb|3THK|A Chain A, Structure Of Sh3 Chimera With A Type Ii Ligand Linked To
The Chain C- Terminal
pdb|3THK|B Chain B, Structure Of Sh3 Chimera With A Type Ii Ligand Linked To
The Chain C- Terminal
Length = 73
Score = 39.3 bits (90), Expect = 0.006, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++V+ALY ++ +++++KG +++ T + WWKV + N G++P+ YVK+
Sbjct: 6 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKK 59
Score = 30.8 bits (68), Expect = 2.1, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNG 115
++V+ALY ++ +++++KG +++ T + WWKV+ D+ G
Sbjct: 6 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQG 50
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 415 ATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID-----VAMMKEGTMSED-- 467
A A D + + L L++LG G FG V ++ D VA+ K +E+
Sbjct: 2 AMAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL 61
Query: 468 -DFIEEAKVMTRLQHQNLVQLYGVC 491
DF E +++ LQH N+V+ GVC
Sbjct: 62 RDFEREIEILKSLQHDNIVKYKGVC 86
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
+GSL +YL++H+ + + LL Q+CKGM YL YIHR+
Sbjct: 103 YGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYLGTKRYIHRD 145
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 20/24 (83%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFT 227
L ++FS SDVW++GV+++E+FT
Sbjct: 195 LTESKFSVASDVWSFGVVLYELFT 218
>pdb|1ABO|A Chain A, Crystal Structure Of The Complex Of The Abl Tyrosine
Kinase Sh3 Domain With 3bp-1 Synthetic Peptide
pdb|1ABO|B Chain B, Crystal Structure Of The Complex Of The Abl Tyrosine
Kinase Sh3 Domain With 3bp-1 Synthetic Peptide
pdb|1ABQ|A Chain A, Crystal Structure Of The Unliganded Abl Tyrosine Kinase
Sh3 Domain
Length = 62
Score = 38.9 bits (89), Expect = 0.007, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 122 MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVKDKNGSVGYIPSNYV 178
M P + VALY F A LS+ KG + V+ + W + + KNG G++PSNY+
Sbjct: 1 MNDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQ-GWVPSNYI 57
Score = 28.5 bits (62), Expect = 9.1, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 69 MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVKDKNG 115
M P + VALY F A LS+ KG + V+ + W + + KNG
Sbjct: 1 MNDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNG 48
>pdb|2FRW|A Chain A, Solution Structure Of The Second Sh3 Domain Of Human
Adaptor Protein Nck2
Length = 57
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 141 DLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
+LSL KG+ VM+ + WW+ NG +G+ PSNYV E+
Sbjct: 16 ELSLVKGSRVTVMEKCSDGWWR-GSYNGQIGWFPSNYVLEE 55
>pdb|1UUE|A Chain A, A-Spectrin Sh3 Domain (V44t, D48g Mutant)
Length = 62
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++V+ALY ++ +++++KG +++ T + WWK + NG G++P+ YVK+
Sbjct: 7 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKT-EVNGRQGFVPAAYVKK 60
>pdb|1CWD|L Chain L, Human P56lck Tyrosine Kinase Complexed With Phosphopeptide
pdb|1CWE|A Chain A, Human P56lck Tyrosine Kinase Complexed With Phosphopeptide
pdb|1CWE|C Chain C, Human P56lck Tyrosine Kinase Complexed With Phosphopeptide
Length = 98
Score = 38.9 bits (89), Expect = 0.007, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 319 LSEKHCCHSIPEVKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEF 375
LS K + + G F++R S ST G ++LS+ + + VKHY I+ G F
Sbjct: 8 LSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGF 67
Query: 376 FLSEKHCCHSIPEVVNYHRHNSGGLASRL 404
++S + + E+V ++ + S GL +RL
Sbjct: 68 YISPRITFPGLHELVRHYTNASDGLCTRL 96
Score = 38.5 bits (88), Expect = 0.008, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 256 AWYVGDMSRQRAE-SILKQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQ 311
+W+ ++SR+ AE +L + G F++R S ST G ++LS+ + + VKHY I+
Sbjct: 2 SWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRN 61
Query: 312 NSRGEFFLSEK 322
G F++S +
Sbjct: 62 LDNGGFYISPR 72
>pdb|1HD3|A Chain A, A-Spectrin Sh3 Domain F52y Mutant
Length = 62
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++V+ALY ++ +++++KG +++ T + WWKV + N GY+P+ YVK+
Sbjct: 7 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNDRQGYVPAAYVKK 60
Score = 28.5 bits (62), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNG 115
++V+ALY ++ +++++KG +++ T + WWKV+ D+ G
Sbjct: 7 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQG 51
>pdb|1JEG|A Chain A, Solution Structure Of The Sh3 Domain From C-Terminal Src
Kinase Complexed With A Peptide From The Tyrosine
Phosphatase Pep
Length = 83
Score = 38.5 bits (88), Expect = 0.008, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQE-HWWKVKDKNGSVGYIPSNYVKEKE 182
+A Y F DL KG ++ T++ +W+K K+K G G IP+NYV+++E
Sbjct: 15 IAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKRE 69
>pdb|1CSK|A Chain A, The Crystal Structure Of Human Csksh3: Structural
Diversity Near The Rt-Src And N-Src Loop
pdb|1CSK|B Chain B, The Crystal Structure Of Human Csksh3: Structural
Diversity Near The Rt-Src And N-Src Loop
pdb|1CSK|C Chain C, The Crystal Structure Of Human Csksh3: Structural
Diversity Near The Rt-Src And N-Src Loop
pdb|1CSK|D Chain D, The Crystal Structure Of Human Csksh3: Structural
Diversity Near The Rt-Src And N-Src Loop
Length = 71
Score = 38.5 bits (88), Expect = 0.009, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQE-HWWKVKDKNGSVGYIPSNYVKEKE 182
+A Y F DL KG ++ T++ +W+K K+K G G IP+NYV+++E
Sbjct: 15 IAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKRE 69
>pdb|1X0N|A Chain A, Nmr Structure Of Growth Factor Receptor Binding Protein
Sh2 Domain Complexed With The Inhibitor
pdb|1QG1|E Chain E, Growth Factor Receptor Binding Protein Sh2 Domain
Complexed With An Shc-Derived Peptide
Length = 104
Score = 38.5 bits (88), Expect = 0.009, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
W+ G + R +AE +L ++ +G F++R S S G ++LS+ V+H+ + ++ G
Sbjct: 5 WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHFKVLRDGAG 61
Query: 316 EFFL 319
++FL
Sbjct: 62 KYFL 65
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD------FIEEAKVMTRLQHQNLVQLYGV 490
+G G +G+V + + + + + +K+ S+DD + E K++ +L+H+NLV L V
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 491 CSKHRPIYIV 500
C K + Y+V
Sbjct: 93 CKKKKRWYLV 102
>pdb|2PNA|A Chain A, Structure Of An Sh2 Domain Of The P85 Alpha Subunit Of
Phosphatidylinositol-3-Oh Kinase
pdb|2PNB|A Chain A, Structure Of An Sh2 Domain Of The P85 Alpha Subunit Of
Phosphatidylinositol-3-Oh Kinase
Length = 104
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK--GLYTLSLYTKVPHPHVKHYHIKQNSR 314
WY GD+SR+ L+ + +G F+VR++STK G YTL+L + +K +H
Sbjct: 6 WYWGDISREEVNEKLR-DTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFH----RD 60
Query: 315 GEFFLSEKHCCHSIPEV 331
G++ S+ +S+ E+
Sbjct: 61 GKYGFSDPLTFNSVVEL 77
>pdb|1JU5|C Chain C, Ternary Complex Of An Crk Sh2 Domain, Crk-Derived
Phophopeptide, And Abl Sh3 Domain By Nmr Spectroscopy
Length = 61
Score = 38.5 bits (88), Expect = 0.009, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVKDKNGSVGYIPSNYV 178
P + VALY F A LS+ KG + V+ + W + + KNG G++PSNY+
Sbjct: 2 PNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQ-GWVPSNYI 55
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 431 LMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKV--MTRLQHQNLVQLY 488
++L E +G G+FG V RGKWRG +VA+ + E + EA++ L+H+N++
Sbjct: 6 IVLQESIGKGRFGEVWRGKWRGE-EVAVKIFSSREERSWFREAEIYQTVMLRHENILGFI 64
Query: 489 GVCSK 493
+K
Sbjct: 65 AADNK 69
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 431 LMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKV--MTRLQHQNLVQLY 488
++L E +G G+FG V RGKWRG +VA+ + E + EA++ L+H+N++
Sbjct: 5 IVLQESIGKGRFGEVWRGKWRGE-EVAVKIFSSREERSWFREAEIYQTVMLRHENILGFI 63
Query: 489 GVCSK 493
+K
Sbjct: 64 AADNK 68
>pdb|1JQQ|A Chain A, Crystal Structure Of Pex13p(301-386) Sh3 Domain
pdb|1JQQ|B Chain B, Crystal Structure Of Pex13p(301-386) Sh3 Domain
pdb|1JQQ|C Chain C, Crystal Structure Of Pex13p(301-386) Sh3 Domain
pdb|1JQQ|D Chain D, Crystal Structure Of Pex13p(301-386) Sh3 Domain
pdb|1N5Z|A Chain A, Complex Structure Of Pex13p Sh3 Domain With A Peptide Of
Pex14p
pdb|1N5Z|B Chain B, Complex Structure Of Pex13p Sh3 Domain With A Peptide Of
Pex14p
Length = 92
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 13/20 (65%), Positives = 18/20 (90%)
Query: 160 WWKVKDKNGSVGYIPSNYVK 179
WWKV+ KNG++GYIP NY++
Sbjct: 55 WWKVRTKNGNIGYIPYNYIE 74
>pdb|2CDT|A Chain A, Alpha-Spectrin Sh3 Domain A56s Mutant
Length = 62
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++V+ALY ++ +++++KG +++ T + WWKV + N G++P++YVK+
Sbjct: 7 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPASYVKK 60
Score = 28.9 bits (63), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNGI 116
++V+ALY ++ +++++KG +++ T + WWKV+ D+ G
Sbjct: 7 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGF 52
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 431 LMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKV--MTRLQHQNLVQLY 488
++L E +G G+FG V RGKWRG +VA+ + E + EA++ L+H+N++
Sbjct: 11 IVLQESIGKGRFGEVWRGKWRGE-EVAVKIFSSREERSWFREAEIYQTVMLRHENILGFI 69
Query: 489 GVCSK 493
+K
Sbjct: 70 AADNK 74
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 431 LMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKV--MTRLQHQNLVQLY 488
++L E +G G+FG V RGKWRG +VA+ + E + EA++ L+H+N++
Sbjct: 8 IVLQESIGKGRFGEVWRGKWRGE-EVAVKIFSSREERSWFREAEIYQTVMLRHENILGFI 66
Query: 489 GVCSK 493
+K
Sbjct: 67 AADNK 71
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 431 LMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKV--MTRLQHQNLVQLY 488
++L E +G G+FG V RGKWRG +VA+ + E + EA++ L+H+N++
Sbjct: 31 IVLQESIGKGRFGEVWRGKWRGE-EVAVKIFSSREERSWFREAEIYQTVMLRHENILGFI 89
Query: 489 GVCSK 493
+K
Sbjct: 90 AADNK 94
>pdb|2EYV|A Chain A, Sh2 Domain Of Ct10-Regulated Kinase
Length = 124
Score = 38.1 bits (87), Expect = 0.011, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 252 EKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHI 309
E+ +WY G +SRQ A ++L Q + G F+VR+SST G Y LS+ + V HY I
Sbjct: 7 EERSSWYWGRLSRQEAVALL-QGQRHGVFLVRDSSTSPGDYVLSVSE---NSRVSHYII 61
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 8/45 (17%)
Query: 4 GSLLNYLRRHENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHR 46
GSL +YL RH ++GL LL Q+C+GMAYL +YIHR
Sbjct: 103 GSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLHSQHYIHR 141
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 431 LMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKV--MTRLQHQNLVQLY 488
++L E +G G+FG V RGKWRG +VA+ + E + EA++ L+H+N++
Sbjct: 44 IVLQESIGKGRFGEVWRGKWRGE-EVAVKIFSSREERSWFREAEIYQTVMLRHENILGFI 102
Query: 489 GVCSK 493
+K
Sbjct: 103 AADNK 107
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 8/45 (17%)
Query: 4 GSLLNYLRRHENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHR 46
GSL +YL RH ++GL LL Q+C+GMAYL +YIHR
Sbjct: 103 GSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLHAQHYIHR 141
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 415 ATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID-----VAMMKEGTMSED-- 467
+A D + + L L++LG G FG V ++ D VA+ K +E+
Sbjct: 27 GSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL 86
Query: 468 -DFIEEAKVMTRLQHQNLVQLYGVC 491
DF E +++ LQH N+V+ GVC
Sbjct: 87 RDFEREIEILKSLQHDNIVKYKGVC 111
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
+GSL +YL++H+ + + LL Q+CKGM YL YIHR+
Sbjct: 128 YGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYLGTKRYIHRD 170
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 20/24 (83%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFT 227
L ++FS SDVW++GV+++E+FT
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFT 243
>pdb|2JS0|A Chain A, Solution Structure Of Second Sh3 Domain Of Adaptor Nck
Length = 61
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 141 DLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
+LSL KG + VM+ + WW+ NG VG+ PSNYV E+
Sbjct: 20 ELSLIKGTKVIVMEKCSDGWWR-GSYNGQVGWFPSNYVTEE 59
>pdb|2IUG|A Chain A, Crystal Structure Of The Pi3-Kinase P85 N-Terminal Sh2
Domain
pdb|2IUH|A Chain A, Crystal Structure Of The Pi3-Kinase P85 N-Terminal Sh2
Domain In Complex With C-Kit Phosphotyrosyl Peptide
pdb|2IUI|A Chain A, Crystal Structure Of The Pi3-Kinase P85 N-Terminal Sh2
Domain In Complex With Pdgfr Phosphotyrosyl Peptide
pdb|2IUI|B Chain B, Crystal Structure Of The Pi3-Kinase P85 N-Terminal Sh2
Domain In Complex With Pdgfr Phosphotyrosyl Peptide
Length = 120
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK--GLYTLSLYTKVPHPHVKHYHIKQNSR 314
WY GD+SR+ L+ + +G F+VR++STK G YTL+L + +K +H
Sbjct: 13 WYWGDISREEVNEKLR-DTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFH----RD 67
Query: 315 GEFFLSEKHCCHSIPEV 331
G++ S+ S+ E+
Sbjct: 68 GKYGFSDPLTFSSVVEL 84
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
GSL YL +++N + N+ L +Q+CKGM YL Y+HR+
Sbjct: 110 GSLKEYLPKNKNKI--NLKQQLKYAVQICKGMDYLGSRQYVHRD 151
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 14/83 (16%)
Query: 425 EIDPAE-----LMLLEELGSGQFGVVRRGKWRGSID-----VAMM----KEGTMSEDDFI 470
E+DP L + +LG G FG V ++ D VA+ + G D
Sbjct: 12 EVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLK 71
Query: 471 EEAKVMTRLQHQNLVQLYGVCSK 493
+E +++ L H+N+V+ G+C++
Sbjct: 72 KEIEILRNLYHENIVKYKGICTE 94
>pdb|1RJA|A Chain A, Solution Structure And Backbone Dynamics Of The
Nonreceptor Tyrosine Kinase Ptk6BRK SH2 DOMAIN
Length = 100
Score = 38.1 bits (87), Expect = 0.013, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 336 GCFVVRNSSTKGL-YTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHR 394
G F++R S Y LS+ V+HY I + + G L+E S+PE+VNYHR
Sbjct: 26 GAFLIRVSEKPSADYVLSVRDT---QAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNYHR 82
Query: 395 HNSGGLASRLKTSPCDR 411
S RL +PC +
Sbjct: 83 AQSLSHGLRL-AAPCRK 98
Score = 30.8 bits (68), Expect = 1.8, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 257 WYVGDMSRQRAESILKQE-DKEGCFVVRNSSTKGL-YTLSLYTKVPHPHVKHYHIKQNSR 314
W+ G +SR A L+ E + G F++R S Y LS+ V+HY I + +
Sbjct: 4 WFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDT---QAVRHYKIWRRAG 60
Query: 315 GEFFLSEKHCCHSIPEV 331
G L+E S+PE+
Sbjct: 61 GRLHLNEAVSFLSLPEL 77
>pdb|3M0S|A Chain A, Crystal Structure Of The R21d Mutant Of Alpha-Spectrin Sh3
Domain. Crystal Obtained In Ammonium Sulphate At Ph 7
Length = 57
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++V+ALY ++ +++++KG +++ T + WWKV + N G++P+ YVK+
Sbjct: 2 ELVLALYDYQEKSPDEVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKK 55
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNGI 116
++V+ALY ++ +++++KG +++ T + WWKV+ D+ G
Sbjct: 2 ELVLALYDYQEKSPDEVTMKKGDILTLLNSTNKDWWKVEVNDRQGF 47
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 208 RFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
+++ K DVW+ GV+M+ + CG P+G + +++ +V++G
Sbjct: 223 KYNEKCDVWSCGVIMY-ILLCGYPPFGGQNDQDIIKKVEKG 262
>pdb|4ESR|A Chain A, Molecular And Structural Characterization Of The Sh3
Domain Of Ahi-1 In Regulation Of Cellular Resistance Of
Bcr-Abl+ Chronic Myeloid Leukemia Cells To Tyrosine
Kinase Inhibitors
pdb|4ESR|B Chain B, Molecular And Structural Characterization Of The Sh3
Domain Of Ahi-1 In Regulation Of Cellular Resistance Of
Bcr-Abl+ Chronic Myeloid Leukemia Cells To Tyrosine
Kinase Inhibitors
Length = 69
Score = 37.7 bits (86), Expect = 0.013, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKEL 183
VVALY + A +L++ +G V E WW G GY P+N+V + L
Sbjct: 9 VVALYDYTANRSDELTIHRGDIIRVFFKDNEDWWYGSIGKGQEGYFPANHVASETL 64
>pdb|2Y3A|B Chain B, Crystal Structure Of P110beta In Complex With Icsh2 Of
P85beta And The Drug Gdc-0941
Length = 302
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSL 295
+ WYVG ++R +AE +L + ++G F++R SS +G Y S+
Sbjct: 194 RTWYVGKINRTQAEEMLSGK-RDGTFLIRESSQRGCYACSV 233
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYH 393
++G F++R SS +G Y S+ V KH I + + G F + S+ E+V ++
Sbjct: 214 RDGTFLIRESSQRGCYACSV---VVDGDTKHCVIYRTATGFGFAEPYNLYGSLKELVLHY 270
Query: 394 RHNS 397
+H S
Sbjct: 271 QHAS 274
>pdb|3NGP|A Chain A, High Resolution Structure Of Alpha-Spectrin Sh3 Domain
Mutant With A Redesigned Core
Length = 62
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++V+ LY ++ +L+++KG +++ T + WWK+ + NG G++P+ Y+K+
Sbjct: 7 ELVLVLYDYQEKSPRELTVKKGDILTLLNSTNKDWWKI-EVNGRQGFVPAAYLKK 60
>pdb|2ABL|A Chain A, Sh3-Sh2 Domain Fragment Of Human Bcr-Abl Tyrosine Kinase
Length = 163
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVKDKNGSVGYIPSNYV 178
P + VALY F A LS+ KG + V+ + W + + KNG G++PSNY+
Sbjct: 8 PNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQ-GWVPSNYI 61
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 336 GCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHR 394
G F+VR S S+ G ++SL + V HY I S G+ ++S + +++ E+V++H
Sbjct: 92 GSFLVRESESSPGQRSISLRYE---GRVYHYRINTASDGKLYVSSESRFNTLAELVHHHS 148
Query: 395 HNSGGLASRL 404
+ GL + L
Sbjct: 149 TVADGLITTL 158
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 72 PKVVVALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVKDKNGIR-KPDQMIRP 125
P + VALY F A LS+ KG + V+ + W + + KNG P I P
Sbjct: 8 PNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITP 63
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID-----VAMMKEGTMSED---DFIEEA 473
D + + L L++LG G FG V ++ D VA+ K +E+ DF E
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 62
Query: 474 KVMTRLQHQNLVQLYGVC 491
+++ LQH N+V+ GVC
Sbjct: 63 EILKSLQHDNIVKYKGVC 80
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
+GSL +YL++H+ + + LL Q+CKGM YL YIHR+
Sbjct: 97 YGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYLGTKRYIHRD 139
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 20/24 (83%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFT 227
L ++FS SDVW++GV+++E+FT
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 436 ELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD------FIEEAKVMTRLQHQNLVQLYG 489
++G G +GVV + + R + + +K+ SEDD + E +++ +L+H NLV L
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 490 VCSKHRPIYIV 500
V + R +++V
Sbjct: 70 VFRRKRRLHLV 80
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID-----VAMMKEGTMSED---DFIEEA 473
D + + L L++LG G FG V ++ D VA+ K +E+ DF E
Sbjct: 2 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 61
Query: 474 KVMTRLQHQNLVQLYGVC 491
+++ LQH N+V+ GVC
Sbjct: 62 EILKSLQHDNIVKYKGVC 79
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
+GSL +YL++H+ + + LL Q+CKGM YL YIHR+
Sbjct: 96 YGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYLGTKRYIHRD 138
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 20/24 (83%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFT 227
L ++FS SDVW++GV+++E+FT
Sbjct: 188 LTESKFSVASDVWSFGVVLYELFT 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID-----VAMMKEGTMSED---DFIEEA 473
D + + L L++LG G FG V ++ D VA+ K +E+ DF E
Sbjct: 6 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 65
Query: 474 KVMTRLQHQNLVQLYGVC 491
+++ LQH N+V+ GVC
Sbjct: 66 EILKSLQHDNIVKYKGVC 83
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
+GSL +YL++H+ + + LL Q+CKGM YL YIHR+
Sbjct: 100 YGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYLGTKRYIHRD 142
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 20/24 (83%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFT 227
L ++FS SDVW++GV+++E+FT
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|3M0P|A Chain A, Crystal Structure Of The R21d Mutant Of Alpha-Spectrin Sh3
Domain. Crystal Obtained In Ammonium Sulphate At Ph 4.
pdb|3M0Q|A Chain A, Crystal Structure Of The R21d Mutant Of Alpha-Spectrin Sh3
Domain. Crystal Obtained In Ammonium Sulphate At Ph 5.
pdb|3M0R|A Chain A, Crystal Structure Of The R21d Mutant Of Alpha-Spectrin Sh3
Domain. Crystal Obtained In Ammonium Sulphate At Ph 6.
pdb|3M0T|A Chain A, Crystal Structure Of The R21d Mutant Of Alpha-Spectrin Sh3
Domain. Crystal Obtained In Ammonium Sulphate At Ph 9.
pdb|3M0U|A Chain A, Crystal Structure Of The R21d Mutant Of Alpha-Spectrin Sh3
Domain. Hexagonal Crystal Obtained In Sodium Formate At
Ph 6.5
Length = 62
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++V+ALY ++ +++++KG +++ T + WWKV + N G++P+ YVK+
Sbjct: 7 ELVLALYDYQEKSPDEVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKK 60
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNGI 116
++V+ALY ++ +++++KG +++ T + WWKV+ D+ G
Sbjct: 7 ELVLALYDYQEKSPDEVTMKKGDILTLLNSTNKDWWKVEVNDRQGF 52
>pdb|3I9Q|A Chain A, Crystal Structure Of The Triple Mutant S19g-P20d-R21s Of
Alpha Spectrin Sh3 Domain
Length = 57
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++V+ALY ++ +++++KG +++ T + WWKV + N G++P+ YVK+
Sbjct: 2 ELVLALYDYQEKGDSEVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKK 55
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNGI 116
++V+ALY ++ +++++KG +++ T + WWKV+ D+ G
Sbjct: 2 ELVLALYDYQEKGDSEVTMKKGDILTLLNSTNKDWWKVEVNDRQGF 47
>pdb|2F2V|A Chain A, Alpha-Spectrin Sh3 Domain A56g Mutant
Length = 62
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++V+ALY ++ +++++KG +++ T + WWKV + N G++P+ YVK+
Sbjct: 7 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAGYVKK 60
Score = 28.5 bits (62), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNGI 116
++V+ALY ++ +++++KG +++ T + WWKV+ D+ G
Sbjct: 7 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGF 52
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID-----VAMMKEGTMSED---DFIEEA 473
D + + L L++LG G FG V ++ D VA+ K +E+ DF E
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 62
Query: 474 KVMTRLQHQNLVQLYGVC 491
+++ LQH N+V+ GVC
Sbjct: 63 EILKSLQHDNIVKYKGVC 80
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
+GSL +YL++H+ + + LL Q+CKGM YL YIHR+
Sbjct: 97 YGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYLGTKRYIHRD 139
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 20/24 (83%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFT 227
L ++FS SDVW++GV+++E+FT
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID-----VAMMKEGTMSED---DFIEEA 473
D + + L L++LG G FG V ++ D VA+ K +E+ DF E
Sbjct: 8 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 67
Query: 474 KVMTRLQHQNLVQLYGVC 491
+++ LQH N+V+ GVC
Sbjct: 68 EILKSLQHDNIVKYKGVC 85
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
+GSL +YL++H+ + + LL Q+CKGM YL YIHR+
Sbjct: 102 YGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYLGTKRYIHRD 144
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 20/24 (83%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFT 227
L ++FS SDVW++GV+++E+FT
Sbjct: 194 LTESKFSVASDVWSFGVVLYELFT 217
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID-----VAMMKEGTMSED---DFIEEA 473
D + + L L++LG G FG V ++ D VA+ K +E+ DF E
Sbjct: 7 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 66
Query: 474 KVMTRLQHQNLVQLYGVC 491
+++ LQH N+V+ GVC
Sbjct: 67 EILKSLQHDNIVKYKGVC 84
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
+GSL +YL++H+ + + LL Q+CKGM YL YIHR+
Sbjct: 101 YGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYLGTKRYIHRD 143
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 20/24 (83%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFT 227
L ++FS SDVW++GV+++E+FT
Sbjct: 193 LTESKFSVASDVWSFGVVLYELFT 216
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID-----VAMMKEGTMSED---DFIEEA 473
D + + L L++LG G FG V ++ D VA+ K +E+ DF E
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 62
Query: 474 KVMTRLQHQNLVQLYGVC 491
+++ LQH N+V+ GVC
Sbjct: 63 EILKSLQHDNIVKYKGVC 80
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
+GSL +YL++H+ + + LL Q+CKGM YL YIHR+
Sbjct: 97 YGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYLGTKRYIHRD 139
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 20/24 (83%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFT 227
L ++FS SDVW++GV+++E+FT
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|1AZE|A Chain A, Nmr Structure Of The Complex Between The C32s-Y7v Mutant
Of The Nsh3 Domain Of Grb2 With A Peptide From Sos, 10
Structures
Length = 56
Score = 37.7 bits (86), Expect = 0.015, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
+A FKA +LS ++G +V+++ + W + NG G+IP NY++ K
Sbjct: 4 IAKVDFKATADDELSFKRGDILKVLNEESDQNWYKAELNGKDGFIPKNYIEMK 56
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID-----VAMMKEGTMSED---DFIEEA 473
D + + L L++LG G FG V ++ D VA+ K +E+ DF E
Sbjct: 1 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 60
Query: 474 KVMTRLQHQNLVQLYGVC 491
+++ LQH N+V+ GVC
Sbjct: 61 EILKSLQHDNIVKYKGVC 78
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
+GSL +YL++H+ + + LL Q+CKGM YL YIHR+
Sbjct: 95 YGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYLGTKRYIHRD 137
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 20/24 (83%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFT 227
L ++FS SDVW++GV+++E+FT
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFT 210
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID-----VAMMKEGTMSED---DFIEEA 473
D + + L L++LG G FG V ++ D VA+ K +E+ DF E
Sbjct: 10 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 69
Query: 474 KVMTRLQHQNLVQLYGVC 491
+++ LQH N+V+ GVC
Sbjct: 70 EILKSLQHDNIVKYKGVC 87
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
+GSL +YL++H+ + + LL Q+CKGM YL YIHR+
Sbjct: 104 YGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYLGTKRYIHRD 146
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 21/26 (80%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFT 227
+ L ++FS SDVW++GV+++E+FT
Sbjct: 194 ESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID-----VAMMKEGTMSED---DFIEEA 473
D + + L L++LG G FG V ++ D VA+ K +E+ DF E
Sbjct: 6 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 65
Query: 474 KVMTRLQHQNLVQLYGVC 491
+++ LQH N+V+ GVC
Sbjct: 66 EILKSLQHDNIVKYKGVC 83
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
+GSL +YL+ H + + LL Q+CKGM YL YIHR+
Sbjct: 100 YGSLRDYLQAHAERI--DHIKLLQYTSQICKGMEYLGTKRYIHRD 142
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 20/24 (83%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFT 227
L ++FS SDVW++GV+++E+FT
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
GSL YL +++N + N+ L +Q+CKGM YL Y+HR+
Sbjct: 98 GSLKEYLPKNKNKI--NLKQQLKYAVQICKGMDYLGSRQYVHRD 139
>pdb|2LJ3|A Chain A, Pfbd: High-Throughput Strategy Of Backbone Fold
Determination For Small Well-Folded Proteins In Less
Than A Day
Length = 63
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++V+ALY ++ +++++KG +++ T + WWKV + N G++P+ YVK+
Sbjct: 7 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKK 60
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNGI 116
++V+ALY ++ +++++KG +++ T + WWKV+ D+ G
Sbjct: 7 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGF 52
>pdb|2L6K|A Chain A, Solution Structure Of A Nonphosphorylated Peptide
Recognizing Domain
Length = 123
Score = 37.7 bits (86), Expect = 0.016, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 14/78 (17%)
Query: 251 LEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPH------ 303
++ K WY +SR +A ++LK +D G F++R+S S +G Y L+L P P
Sbjct: 1 MDTSKFWYKPHLSRDQAIALLKDKDP-GAFLIRDSHSFQGAYGLALKVATPPPSAQPWKG 59
Query: 304 ------VKHYHIKQNSRG 315
V+H+ I+ +G
Sbjct: 60 DPVEQLVRHFLIETGPKG 77
>pdb|1M8M|A Chain A, Solid-State Mas Nmr Structure Of The A-Spectrin Sh3 Domain
pdb|1U06|A Chain A, Crystal Structure Of Chicken Alpha-Spectrin Sh3 Domain
pdb|2NUZ|A Chain A, Crystal Structure Of Alpha Spectrin Sh3 Domain Measured At
Room Temperature
pdb|1AEY|A Chain A, Alpha-Spectrin Src Homology 3 Domain, Solution Nmr, 15
Structures
pdb|1SHG|A Chain A, Crystal Structure Of A Src-Homology 3 (Sh3) Domain
Length = 62
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++V+ALY ++ +++++KG +++ T + WWKV + N G++P+ YVK+
Sbjct: 7 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKK 60
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNGI 116
++V+ALY ++ +++++KG +++ T + WWKV+ D+ G
Sbjct: 7 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGF 52
>pdb|2DL5|A Chain A, Solution Structure Of The First Sh3 Domain Of Human
Kiaa0769 Protein
Length = 78
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQ-EHWWKVKDKNGSVGYIPSNYVK 179
P +Y +KA + +L++E+ EV++D E W K ++K G VGY+P Y++
Sbjct: 13 PLTCKVVYSYKASQPDELTIEEHEVLEVIEDGDMEDWVKARNKVGQVGYVPEKYLQ 68
>pdb|1PWT|A Chain A, Thermodynamic Analysis Of Alpha-Spectrin Sh3 And Two Of
Its Circular Permutants With Different Loop Lengths:
Discerning The Reasons For Rapid Folding In Proteins
Length = 61
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++V+ALY ++ +++++KG +++ T + WWKV + N G++P+ YVK+
Sbjct: 6 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKK 59
Score = 28.9 bits (63), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNGI 116
++V+ALY ++ +++++KG +++ T + WWKV+ D+ G
Sbjct: 6 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGF 51
>pdb|2CUB|A Chain A, Solution Structure Of The Sh3 Domain Of The Human
Cytoplasmic Protein Nck1
Length = 88
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 141 DLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
+LSL KG + VM+ + WW+ NG VG+ PSNYV E+
Sbjct: 33 ELSLIKGTKVIVMEKCSDGWWR-GSYNGQVGWFPSNYVTEE 72
>pdb|2DIL|A Chain A, Solution Structure Of The Sh3 Domain Of The Human Proline-
Serine-Threonine Phosphatase-Interacting Protein 1
Length = 69
Score = 37.4 bits (85), Expect = 0.018, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
ALY + A +L L G EV+ + ++ WW V ++NG G++P +Y+++
Sbjct: 13 ALYDYTAQNPDELDLSAGDILEVILEGEDGWWTV-ERNGQRGFVPGSYLEK 62
>pdb|1NEG|A Chain A, Crystal Structure Analysis Of N-And C-Terminal Labeled
Sh3- Domain Of Alpha-Chicken Spectrin
Length = 83
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++V+ALY ++ +++++KG +++ T + WWKV + N G++P+ YVK+
Sbjct: 18 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKK 71
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNGI 116
++V+ALY ++ +++++KG +++ T + WWKV+ D+ G
Sbjct: 18 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGF 63
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 430 ELMLLEELGSGQFGVVRR------GKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQN 483
E L EELG G F VVRR G+ ++ + K EA++ L+H N
Sbjct: 12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPN 71
Query: 484 LVQLYGVCSKHRPIYIVTD 502
+V+L+ S+ Y++ D
Sbjct: 72 IVRLHDSISEEGHHYLIFD 90
>pdb|2VKN|A Chain A, Yeast Sho1 Sh3 Domain Complexed With A Peptide From Pbs2
Length = 70
Score = 37.4 bits (85), Expect = 0.020, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 130 ALYPFKAIEGG--DLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
ALYP+ A + ++S E+ +V D + WWK + NG G IPSNYV+
Sbjct: 10 ALYPYDADDDDAYEISFEQNEILQV-SDIEGRWWKARRANGETGIIPSNYVQ 60
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 27/45 (60%), Gaps = 8/45 (17%)
Query: 4 GSLLNYLRRHENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHR 46
GSL +YL RH VGL LL Q+C+GMAYL +YIHR
Sbjct: 97 GSLRDYLPRH------CVGLAQLLLFAQQICEGMAYLHAQHYIHR 135
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFT-CGKMPYGRLKNTEVVDRVQ 246
+ L +F SDVW++GV ++E+ T C K TE++ Q
Sbjct: 184 ECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQ 229
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 27/45 (60%), Gaps = 8/45 (17%)
Query: 4 GSLLNYLRRHENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHR 46
GSL +YL RH VGL LL Q+C+GMAYL +YIHR
Sbjct: 98 GSLRDYLPRH------CVGLAQLLLFAQQICEGMAYLHAQHYIHR 136
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFT-CGKMPYGRLKNTEVVDRVQ 246
+ L +F SDVW++GV ++E+ T C K TE++ Q
Sbjct: 185 ECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQ 230
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Query: 411 RPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRR--GKWRGSIDVAMMKEGTMSEDD 468
+PV G +D ++I LEELGSG FGVV R K G + VA D
Sbjct: 40 QPVEVKQGSVYDYYDI-------LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDK 92
Query: 469 FI--EEAKVMTRLQHQNLVQLY 488
+ E +M +L H L+ L+
Sbjct: 93 YTVKNEISIMNQLHHPKLINLH 114
>pdb|1JU5|A Chain A, Ternary Complex Of An Crk Sh2 Domain, Crk-Derived
Phophopeptide, And Abl Sh3 Domain By Nmr Spectroscopy
Length = 109
Score = 37.0 bits (84), Expect = 0.023, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 256 AWYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHI 309
+WY G +SRQ A ++L Q + G F+VR+SST G Y LS+ + V HY I
Sbjct: 1 SWYWGRLSRQEAVALL-QGQRHGVFLVRDSSTSPGDYVLSVSE---NSRVSHYII 51
>pdb|2RMO|A Chain A, Solution Structure Of Alpha-Spectrin_sh3-Bergerac From
Chicken
Length = 70
Score = 37.0 bits (84), Expect = 0.023, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 7/62 (11%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDK---NGSV----GYIPSNYV 178
++V+ALY ++ +++++KG +++ T + WWKV+ K NG G++P+ YV
Sbjct: 7 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVKATANGKTYERQGFVPAAYV 66
Query: 179 KE 180
K+
Sbjct: 67 KK 68
Score = 30.4 bits (67), Expect = 2.5, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 27/41 (65%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDK 113
++V+ALY ++ +++++KG +++ T + WWKV+ K
Sbjct: 7 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVK 47
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD------FIEEAKVMTRLQHQNLVQL 487
LE++G G +G V + K R + ++ +K + +DD + E ++ L+H+N+V+L
Sbjct: 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 488 YGVCSKHRPIYIV 500
+ V + + +V
Sbjct: 67 HDVLHSDKKLTLV 79
>pdb|2RD0|B Chain B, Structure Of A Human P110alpha/p85alpha Complex
pdb|4A55|B Chain B, Crystal Structure Of P110alpha In Complex With Ish2 Of
P85alpha And The Inhibitor Pik-108
Length = 279
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK--GLYTLSLYTKVPHPHVKHYH 308
WY GD+SR+ L+ + +G F+VR++STK G YTL+L + +K +H
Sbjct: 12 WYWGDISREEVNEKLR-DTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFH 64
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD------FIEEAKVMTRLQHQNLVQL 487
LE++G G +G V + K R + ++ +K + +DD + E ++ L+H+N+V+L
Sbjct: 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 488 YGVCSKHRPIYIV 500
+ V + + +V
Sbjct: 67 HDVLHSDKKLTLV 79
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID-----VAMMKEGTMSED---DFIEEA 473
D + + L L +LG G FG V ++ D VA+ K +E+ DF E
Sbjct: 6 DPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREI 65
Query: 474 KVMTRLQHQNLVQLYGVC 491
+++ LQH N+V+ GVC
Sbjct: 66 EILKSLQHDNIVKYKGVC 83
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
+GSL YL++H+ + + LL Q+CKGM YL YIHR+
Sbjct: 100 YGSLREYLQKHKERI--DHIKLLQYTSQICKGMEYLGTKRYIHRD 142
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 20/24 (83%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFT 227
L ++FS SDVW++GV+++E+FT
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|2KNO|A Chain A, Nmr Solution Structure Of Sh2 Domain Of The Human Tensin
Like C1 Domain Containing Phosphatase (Tenc1)
Length = 131
Score = 37.0 bits (84), Expect = 0.027, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 14/77 (18%)
Query: 252 EKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPH------- 303
+ K WY +SR +A ++LK +D G F++R+S S +G Y L+L P P
Sbjct: 17 DTSKFWYKPHLSRDQAIALLKDKDP-GAFLIRDSHSFQGAYGLALKVATPPPSAQPWKGD 75
Query: 304 -----VKHYHIKQNSRG 315
V+H+ I+ +G
Sbjct: 76 PVEQLVRHFLIETGPKG 92
>pdb|2EO6|A Chain A, Solution Structure Of The Sh2 Domain From Mouse B-Cell
Linker Protein Blnk
Length = 141
Score = 37.0 bits (84), Expect = 0.028, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 246 QRGIILEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNSS---TKGLYTL 293
Q +L KP WY G R+ AE L + +K+G F++R SS +K YTL
Sbjct: 16 QEAELLGKP--WYAGACDRKSAEEALHRSNKDGSFLIRKSSGHDSKQPYTL 64
Score = 28.9 bits (63), Expect = 6.9, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 17/75 (22%)
Query: 333 DKEGCFVVRNSS---TKGLYTL-SLYTK----VPHPHV---KHYHIKQNSRGEFFLSEKH 381
+K+G F++R SS +K YTL + + K +P + K Y + + GE +
Sbjct: 43 NKDGSFLIRKSSGHDSKQPYTLVAFFNKRVYNIPVRFIEATKQYALGKKKNGEEYFG--- 99
Query: 382 CCHSIPEVVNYHRHN 396
S+ E+VN H+HN
Sbjct: 100 ---SVVEIVNSHQHN 111
>pdb|1QKX|A Chain A, Alpha-Spectrin Src Homology 3 Domain, N47a Mutant In The
Distal Loop
Length = 62
Score = 37.0 bits (84), Expect = 0.028, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++V+ALY ++ +++++KG +++ T + WWKV+ + G++P+ YVK+
Sbjct: 7 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVADRQ-GFVPAAYVKK 60
Score = 30.4 bits (67), Expect = 2.6, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNG 115
++V+ALY ++ +++++KG +++ T + WWKV+ D+ G
Sbjct: 7 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVADRQG 51
>pdb|1E6G|A Chain A, A-Spectrin Sh3 Domain A11v, V23l, M25i, V53i, V58l Mutant
Length = 62
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++V+ LY ++ +L+++KG +++ T + WWKV + N G+IP+ Y+K+
Sbjct: 7 ELVLVLYDYQEKSPRELTIKKGDILTLLNSTNKDWWKV-EVNDRQGFIPAAYLKK 60
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 435 EELGSGQFGVVRRGKWRGS---IDVAMMKEGTMSEDDFIE---EAKVMTRLQHQNLVQLY 488
EELG G F VVRR + + ++ +S DF + EA++ +LQH N+V+L+
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 489 GVCSKHRPIYIVTD 502
+ Y+V D
Sbjct: 72 DSIQEESFHYLVFD 85
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 435 EELGSGQFGVVRRGKWRGS---IDVAMMKEGTMSEDDFIE---EAKVMTRLQHQNLVQLY 488
EELG G F VVRR + + ++ +S DF + EA++ +LQH N+V+L+
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 489 GVCSKHRPIYIVTD 502
+ Y+V D
Sbjct: 72 DSIQEESFHYLVFD 85
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 435 EELGSGQFGVVRRGKWRGS---IDVAMMKEGTMSEDDFIE---EAKVMTRLQHQNLVQLY 488
EELG G F VVRR + + ++ +S DF + EA++ +LQH N+V+L+
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 70
Query: 489 GVCSKHRPIYIVTD 502
+ Y+V D
Sbjct: 71 DSIQEESFHYLVFD 84
>pdb|1S1N|A Chain A, Sh3 Domain Of Human Nephrocystin
Length = 68
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
+A+ F A + GDL+ +KG V++ + WW KD G+ G +P Y++
Sbjct: 14 IAVGDFTAQQVGDLTFKKGEILLVIEKKPDGWWIAKDAKGNEGLVPRTYLE 64
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
+A+ F A + GDL+ +KG V++ + WW KD G
Sbjct: 14 IAVGDFTAQQVGDLTFKKGEILLVIEKKPDGWWIAKDAKG 53
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 438 GSGQFGVVRRGKWRGSIDVAMMKEGTMSE-------DDFIEEAKVMTRLQHQNLVQLYGV 490
G G FGVV +G + + VA+ K M + F +E KV + QH+NLV+L G
Sbjct: 31 GEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 491 CSKHRPIYIV 500
S + +V
Sbjct: 90 SSDGDDLCLV 99
>pdb|3SEM|A Chain A, Sem5 Sh3 Domain Complexed With Peptoid Inhibitor
pdb|3SEM|B Chain B, Sem5 Sh3 Domain Complexed With Peptoid Inhibitor
pdb|2SEM|A Chain A, Sem5 Sh3 Domain Complexed With Peptoid Inhibitor
pdb|2SEM|B Chain B, Sem5 Sh3 Domain Complexed With Peptoid Inhibitor
Length = 60
Score = 36.6 bits (83), Expect = 0.037, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
K V AL+ F E G+L+ ++G +++ +WW+ N G PSNYV
Sbjct: 3 KFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWE-GQLNNRRGIFPSNYV 54
Score = 29.6 bits (65), Expect = 4.2, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW--KVKDKNGI 116
K V AL+ F E G+L+ ++G +++ +WW ++ ++ GI
Sbjct: 3 KFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQLNNRRGI 48
>pdb|1SEM|A Chain A, Structural Determinants Of Peptide-Binding Orientation And
Of Sequence Specificity In Sh3 Domains
pdb|1SEM|B Chain B, Structural Determinants Of Peptide-Binding Orientation And
Of Sequence Specificity In Sh3 Domains
Length = 58
Score = 36.6 bits (83), Expect = 0.039, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
K V AL+ F E G+L+ ++G +++ +WW+ N G PSNYV
Sbjct: 3 KFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWE-GQLNNRRGIFPSNYV 54
Score = 29.6 bits (65), Expect = 4.3, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW--KVKDKNGI 116
K V AL+ F E G+L+ ++G +++ +WW ++ ++ GI
Sbjct: 3 KFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQLNNRRGI 48
>pdb|1UGV|A Chain A, Solution Structure Of The Sh3 Domain Of Human
Olygophrein-1 Like Protein (Kiaa0621)
Length = 72
Score = 36.2 bits (82), Expect = 0.040, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
ALY KA +LS G ++ + +QE W NG G IP NYV+
Sbjct: 15 ALYACKAEHDSELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVE 64
>pdb|2DRK|A Chain A, Acanthamoeba Myosin I Sh3 Domain Bound To Acan125
Length = 59
Score = 36.2 bits (82), Expect = 0.040, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V ALY + A G +L+ ++G V WW+ + NG G++P+NYV++
Sbjct: 7 VKALYDYDAQTGDELTFKEGDTIIVHQKDPAGWWE-GELNGKRGWVPANYVQD 58
>pdb|2DRM|A Chain A, Acanthamoeba Myosin I Sh3 Domain Bound To Acan125
pdb|2DRM|B Chain B, Acanthamoeba Myosin I Sh3 Domain Bound To Acan125
pdb|2DRM|C Chain C, Acanthamoeba Myosin I Sh3 Domain Bound To Acan125
pdb|2DRM|D Chain D, Acanthamoeba Myosin I Sh3 Domain Bound To Acan125
Length = 58
Score = 36.2 bits (82), Expect = 0.040, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V ALY + A G +L+ ++G V WW+ + NG G++P+NYV++
Sbjct: 6 VKALYDYDAQTGDELTFKEGDTIIVHQKDPAGWWE-GELNGKRGWVPANYVQD 57
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 435 EELGSGQFGVVRRGKWRGS---IDVAMMKEGTMSEDDFIE---EAKVMTRLQHQNLVQLY 488
EELG G F VVRR + + ++ +S DF + EA++ +LQH N+V+L+
Sbjct: 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 94
Query: 489 GVCSKHRPIYIVTD 502
+ Y+V D
Sbjct: 95 DSIQEESFHYLVFD 108
>pdb|2KBT|A Chain A, Attachment Of An Nmr-Invisible Solubility Enhancement Tag
(Inset) Using A Sortase-Mediated Protein Ligation Method
Length = 142
Score = 36.2 bits (82), Expect = 0.041, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDT-QEHWWKVKDKNGSVGYIPSNYVKE 180
A Y F A + +LSL++G ++++ Q+ WW+ + G +G+ PSNYV+E
Sbjct: 10 ARYDFCARDRSELSLKEGDIIKILNKKGQQGWWR-GEIYGRIGWFPSNYVEE 60
>pdb|3EG0|A Chain A, Crystal Structure Of The N114t Mutant Of Abl-Sh3 Domain
Length = 63
Score = 36.2 bits (82), Expect = 0.043, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVKDKNGSVGYIPSNYV 178
P + VALY F A LS+ KG + V+ + W + + KNG G++PS Y+
Sbjct: 5 PNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQ-GWVPSTYI 58
>pdb|1K76|A Chain A, Solution Structure Of The C-Terminal Sem-5 Sh3 Domain
(Minimized Average Structure)
pdb|1KFZ|A Chain A, Solution Structure Of C-Terminal Sem-5 Sh3 Domain
(Ensemble Of 16 Structures)
Length = 62
Score = 36.2 bits (82), Expect = 0.044, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
K V AL+ F E G+L+ ++G +++ +WW+ N G PSNYV
Sbjct: 5 KFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWE-GQLNNRRGIFPSNYV 56
Score = 29.6 bits (65), Expect = 3.9, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW--KVKDKNGIRKPDQMIRP 125
K V AL+ F E G+L+ ++G +++ +WW ++ ++ GI P + P
Sbjct: 5 KFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQLNNRRGIF-PSNYVAP 58
>pdb|2ESW|A Chain A, Atomic Structure Of The N-Terminal Sh3 Domain Of Mouse
Beta Pix,P21-Activated Kinase (Pak)-Interacting Exchange
Factor
pdb|2ESW|B Chain B, Atomic Structure Of The N-Terminal Sh3 Domain Of Mouse
Beta Pix,P21-Activated Kinase (Pak)-Interacting Exchange
Factor
Length = 61
Score = 36.2 bits (82), Expect = 0.046, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
VV A + F+ +LS KG V + WW+ NG G+ PSNYV+E
Sbjct: 8 VVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWE-GTHNGRTGWFPSNYVRE 60
>pdb|2DF6|A Chain A, Crystal Structure Of The Sh3 Domain Of Betapix In Complex
With A High Affinity Peptide From Pak2
pdb|2DF6|B Chain B, Crystal Structure Of The Sh3 Domain Of Betapix In Complex
With A High Affinity Peptide From Pak2
pdb|2P4R|A Chain A, Structural Basis For A Novel Interaction Between Aip4 And
Beta-pix
pdb|2G6F|X Chain X, Crystal Structure Of The Sh3 Domain Of Betapix In Complex
With A High Affinity Peptide From Pak2
Length = 59
Score = 36.2 bits (82), Expect = 0.046, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
VV A + F+ +LS KG V + WW+ NG G+ PSNYV+E
Sbjct: 6 VVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWE-GTHNGRTGWFPSNYVRE 58
>pdb|2AK5|A Chain A, Beta Pix-Sh3 Complexed With A Cbl-B Peptide
pdb|2AK5|B Chain B, Beta Pix-Sh3 Complexed With A Cbl-B Peptide
Length = 64
Score = 36.2 bits (82), Expect = 0.048, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
VV A + F+ +LS KG V + WW+ NG G+ PSNYV+E
Sbjct: 8 VVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWE-GTHNGRTGWFPSNYVRE 60
>pdb|3EG1|A Chain A, Crystal Structure Of The N114q Mutant Of Abl-Sh3 Domain
Complexed With A Designed High-Affinity Peptide Ligand:
Implications For Sh3-Ligand Interactions
pdb|3EG1|B Chain B, Crystal Structure Of The N114q Mutant Of Abl-Sh3 Domain
Complexed With A Designed High-Affinity Peptide Ligand:
Implications For Sh3-Ligand Interactions
pdb|3EG2|A Chain A, Crystal Structure Of The N114q Mutant Of Abl-Sh3 Domain
Length = 63
Score = 36.2 bits (82), Expect = 0.048, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVKDKNGSVGYIPSNYV 178
P + VALY F A LS+ KG + V+ + W + + KNG G++PS Y+
Sbjct: 5 PNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQ-GWVPSQYI 58
Score = 29.3 bits (64), Expect = 5.1, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 72 PKVVVALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVKDKNGIR-KPDQMIRP 125
P + VALY F A LS+ KG + V+ + W + + KNG P Q I P
Sbjct: 5 PNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSQYITP 60
>pdb|2OAW|A Chain A, Structure Of Shh Variant Of "bergerac" Chimera Of Spectrin
Sh3
pdb|2OAW|B Chain B, Structure Of Shh Variant Of "bergerac" Chimera Of Spectrin
Sh3
pdb|2OAW|C Chain C, Structure Of Shh Variant Of "bergerac" Chimera Of Spectrin
Sh3
pdb|2OAW|D Chain D, Structure Of Shh Variant Of "bergerac" Chimera Of Spectrin
Sh3
Length = 65
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 37/61 (60%), Gaps = 7/61 (11%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDK---NGSV----GYIPSNYVK 179
+V+ALY ++ +++++KG +++ T + WWKV+ K NG G++P+ YVK
Sbjct: 3 LVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVKITVNGKTYERQGFVPAAYVK 62
Query: 180 E 180
+
Sbjct: 63 K 63
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 26/40 (65%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDK 113
+V+ALY ++ +++++KG +++ T + WWKV+ K
Sbjct: 3 LVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVK 42
>pdb|2KGT|A Chain A, Solution Structure Of Sh3 Domain Of Ptk6
Length = 72
Score = 36.2 bits (82), Expect = 0.050, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGSV--GYIPSNYVKEKE 182
V L+ FK+ +LS G + V ++ WW + + G+V GY+P NY+ E+E
Sbjct: 14 VGLWDFKSRTDEELSFRAGDVFHVARKEEQWWWATLLDEAGGAVAQGYVPHNYLAERE 71
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 430 ELMLLEELGSGQFGVVRR------GKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQN 483
E L EELG G F VVRR G+ + + K EA++ L+H N
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN 64
Query: 484 LVQLYGVCSKHRPIYIVTD 502
+V+L+ S+ Y+V D
Sbjct: 65 IVRLHDSISEEGFHYLVFD 83
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Query: 430 ELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-----------SEDDFIEEAKVMTR 478
+L+ E LG G F + +G R D + E + + F E A +M++
Sbjct: 9 DLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSK 68
Query: 479 LQHQNLVQLYGVC 491
L H++LV YGVC
Sbjct: 69 LSHKHLVLNYGVC 81
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 26/58 (44%)
Query: 205 NYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDM 262
N + +D W++G +WE+ + G P L + + + L PKA + ++
Sbjct: 191 NPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKAAELANL 248
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Query: 430 ELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-----------SEDDFIEEAKVMTR 478
+L+ E LG G F + +G R D + E + + F E A +M++
Sbjct: 9 DLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSK 68
Query: 479 LQHQNLVQLYGVC 491
L H++LV YGVC
Sbjct: 69 LSHKHLVLNYGVC 81
Score = 28.5 bits (62), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 26/58 (44%)
Query: 205 NYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDM 262
N + +D W++G +WE+ + G P L + + + L PKA + ++
Sbjct: 191 NPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKAAELANL 248
>pdb|1ZSG|A Chain A, Beta Pix-Sh3 Complexed With An Atypical Peptide From
Alpha- Pak
Length = 65
Score = 35.8 bits (81), Expect = 0.058, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
VV A + F+ +LS KG V + WW+ NG G+ PSNYV+E
Sbjct: 10 VVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWE-GTLNGRTGWFPSNYVRE 62
>pdb|4E6R|A Chain A, Crystal Structure Of A Cytoplasmic Protein Nck2 (Nck2)
From Homo Sapiens At 2.20 A Resolution
pdb|4E6R|B Chain B, Crystal Structure Of A Cytoplasmic Protein Nck2 (Nck2)
From Homo Sapiens At 2.20 A Resolution
Length = 58
Score = 35.8 bits (81), Expect = 0.059, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 132 YPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
+ + A +LSL G+ V + + WW+ NG +G+ PSNYV E+
Sbjct: 8 FAYVAEREDELSLVXGSRVTVXEXCSDGWWR-GSYNGQIGWFPSNYVLEE 56
>pdb|2ROT|A Chain A, Structure Of Chimeric Variant Of Sh3 Domain- Shh
Length = 70
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 7/62 (11%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDK---NGSV----GYIPSNYV 178
++V+ALY ++ +++++KG +++ T + WWKV+ K NG G++P+ YV
Sbjct: 7 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVKITVNGKTYERQGFVPAAYV 66
Query: 179 KE 180
K+
Sbjct: 67 KK 68
Score = 28.5 bits (62), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDK 113
++V+ALY ++ +++++KG +++ T + WWKV+ K
Sbjct: 7 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVK 47
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 430 ELMLLEELGSGQFGVVRR------GKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQN 483
E L EELG G F VVRR G+ + + K EA++ L+H N
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN 64
Query: 484 LVQLYGVCSKHRPIYIVTD 502
+V+L+ S+ Y+V D
Sbjct: 65 IVRLHDSISEEGFHYLVFD 83
>pdb|1BBZ|A Chain A, Crystal Structure Of The Abl-Sh3 Domain Complexed With A
Designed High-Affinity Peptide Ligand: Implications For
Sh3-Ligand Interactions
pdb|1BBZ|C Chain C, Crystal Structure Of The Abl-Sh3 Domain Complexed With A
Designed High-Affinity Peptide Ligand: Implications For
Sh3-Ligand Interactions
pdb|1BBZ|G Chain G, Crystal Structure Of The Abl-Sh3 Domain Complexed With A
Designed High-Affinity Peptide Ligand: Implications For
Sh3-Ligand Interactions
pdb|1BBZ|E Chain E, Crystal Structure Of The Abl-Sh3 Domain Complexed With A
Designed High-Affinity Peptide Ligand: Implications For
Sh3-Ligand Interactions
Length = 58
Score = 35.8 bits (81), Expect = 0.062, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVKDKNGSVGYIPSNYV 178
VALY F A LS+ KG + V+ + W + + KNG G++PSNY+
Sbjct: 4 VALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQ-GWVPSNYI 53
>pdb|3EG3|A Chain A, Crystal Structure Of The N114a Mutant Of Abl-sh3 Domain
pdb|3EGU|A Chain A, Crystal Structure Of The N114a Mutant Of Abl-Sh3 Domain
Length = 63
Score = 35.8 bits (81), Expect = 0.063, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVKDKNGSVGYIPSNYV 178
P + VALY F A LS+ KG + V+ + W + + KNG G++PS Y+
Sbjct: 5 PNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQ-GWVPSAYI 58
>pdb|1AWO|A Chain A, The Solution Nmr Structure Of Abl Sh3 And Its Relationship
To Sh2 In The Sh(32) Construct, 20 Structures
Length = 62
Score = 35.8 bits (81), Expect = 0.064, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVKDKNGSVGYIPSNYV 178
VALY F A LS+ KG + V+ + W + + KNG G++PSNY+
Sbjct: 9 VALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQ-GWVPSNYI 58
>pdb|1E7O|A Chain A, A-Spectrin Sh3 Domain A11v, V23l, M25v, V44i, V58l
Mutations
Length = 62
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++V+ LY ++ +L+++KG +++ T + WWK+ + N G++P+ Y+K+
Sbjct: 7 ELVLVLYDYQEKSPRELTVKKGDILTLLNSTNKDWWKI-EVNDRQGFVPAAYLKK 60
>pdb|2DM1|A Chain A, Solution Structure Of The Second Sh3 Domain Of Human
Protein Vav-2
Length = 73
Score = 35.4 bits (80), Expect = 0.083, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDT--QEHWWKVKDKNGSVGYIPSNYVKEK 181
VA Y F A + +LSL +G + + WWK + NG +G+ PS YV+E+
Sbjct: 11 VARYNFAARDMRELSLREGDVVRIYSRIGGDQGWWK-GETNGRIGWFPSTYVEEE 64
>pdb|2KR3|A Chain A, Solution Structure Of Sha-D
Length = 70
Score = 35.4 bits (80), Expect = 0.087, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGS-------VGYIPSNYV 178
++V+ALY ++ +++++KG +++ T + WWKV+ K + G++P+ YV
Sbjct: 7 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVKATANDKTYERQGFVPAAYV 66
Query: 179 KE 180
K+
Sbjct: 67 KK 68
Score = 30.4 bits (67), Expect = 2.6, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 27/41 (65%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDK 113
++V+ALY ++ +++++KG +++ T + WWKV+ K
Sbjct: 7 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVK 47
>pdb|2KYM|A Chain A, Solution Structure Of The Bem1p Sh3-Ci Domain From
L.Elongisporus In Complex With Ste20p Peptide
Length = 120
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Query: 123 IRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKN--GSVGYIPSNYVKE 180
+ P V LY FKA +L + G + W+ K N G G +P +YV+
Sbjct: 1 MAPLFAVTLYEFKAERDDELDVSPGENLSICAHYDYEWFIAKPINRLGGPGLVPVSYVRI 60
Query: 181 KELLGLQKYDDVNGLTLELIHQVLN 205
+L+ KY V+ E + ++++
Sbjct: 61 IDLMDPAKYASVDTYDREQVMKIID 85
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 13/79 (16%)
Query: 435 EELGSGQFGVVRRGKWRGSIDVAMMK---------EGTMSE--DDFIEEAKVMTRLQHQN 483
+++G G FG+V +G+ V +K E M E +F E +M+ L H N
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 484 LVQLYGVCSKHRPIYIVTD 502
+V+LYG+ H P +V +
Sbjct: 85 IVKLYGLM--HNPPRMVME 101
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 13/79 (16%)
Query: 435 EELGSGQFGVVRRGKWRGSIDVAMMK---------EGTMSE--DDFIEEAKVMTRLQHQN 483
+++G G FG+V +G+ V +K E M E +F E +M+ L H N
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 484 LVQLYGVCSKHRPIYIVTD 502
+V+LYG+ H P +V +
Sbjct: 85 IVKLYGLM--HNPPRMVME 101
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 13/79 (16%)
Query: 435 EELGSGQFGVVRRGKWRGSIDVAMMK---------EGTMSE--DDFIEEAKVMTRLQHQN 483
+++G G FG+V +G+ V +K E M E +F E +M+ L H N
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 484 LVQLYGVCSKHRPIYIVTD 502
+V+LYG+ H P +V +
Sbjct: 85 IVKLYGLM--HNPPRMVME 101
>pdb|1Z3K|A Chain A, Structural Insight Into The Binding Diversity Between The
Tyr-Phosphorylated Human Ephrinbs And Nck2 Sh2 Domain
Length = 98
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVK 305
+ WY G+++R +AE L + EG F++R+S S+ +++SL + H K
Sbjct: 1 REWYYGNVTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKASGKNKHFK 52
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD-----FIEEAKVMTRLQHQNLVQLY 488
LE++G G +GVV + + A+ K ED+ I E ++ L+H N+V+LY
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 489 GVCSKHRPIYIV 500
V + + +V
Sbjct: 67 DVIHTKKRLVLV 78
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 433 LLEELGSGQFGVVRR------GKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQ 486
L EELG G F VVRR G+ + + K EA++ L+H N+V+
Sbjct: 26 LFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVR 85
Query: 487 LYGVCSKHRPIYIVTD 502
L+ S+ Y++ D
Sbjct: 86 LHDSISEEGHHYLIFD 101
>pdb|2RF0|A Chain A, Crystal Structure Of Human Mixed Lineage Kinase Map3k10
Sh3 Domain
pdb|2RF0|B Chain B, Crystal Structure Of Human Mixed Lineage Kinase Map3k10
Sh3 Domain
pdb|2RF0|C Chain C, Crystal Structure Of Human Mixed Lineage Kinase Map3k10
Sh3 Domain
pdb|2RF0|D Chain D, Crystal Structure Of Human Mixed Lineage Kinase Map3k10
Sh3 Domain
Length = 89
Score = 34.7 bits (78), Expect = 0.14, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDT-----QEHWWKVKDKNGSVGYIPSNYV 178
V A++ ++A +L+L +G +V+ E WW + +G VG PSNYV
Sbjct: 31 VWTAVFDYEAAGDEELTLRRGDRVQVLSQDCAVSGDEGWWTGQLPSGRVGVFPSNYV 87
>pdb|1QKW|A Chain A, Alpha-Spectrin Src Homology 3 Domain, N47g Mutant In The
Distal Loop
Length = 62
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++V+ALY ++ +++++KG +++ T + WWKV + G++P+ YVK+
Sbjct: 7 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVGDRQGFVPAAYVKK 60
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD-----FIEEAKVMTRLQHQNLVQLY 488
LE++G G +GVV + + A+ K ED+ I E ++ L+H N+V+LY
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 489 GVCSKHRPIYIV 500
V + + +V
Sbjct: 67 DVIHTKKRLVLV 78
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD-----FIEEAKVMTRLQHQNLVQLY 488
LE++G G +GVV + + A+ K ED+ I E ++ L+H N+V+LY
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 489 GVCSKHRPIYIV 500
V + + +V
Sbjct: 67 DVIHTKKRLVLV 78
>pdb|1R1P|A Chain A, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (lat) By The Adaptor Protein Gads
pdb|1R1P|B Chain B, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (lat) By The Adaptor Protein Gads
pdb|1R1P|C Chain C, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (lat) By The Adaptor Protein Gads
pdb|1R1P|D Chain D, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (lat) By The Adaptor Protein Gads
pdb|1R1Q|A Chain A, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (Lat) By The Adaptor Protein Gads
pdb|1R1Q|B Chain B, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (Lat) By The Adaptor Protein Gads
pdb|1R1S|A Chain A, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (Lat) By The Adaptor Protein Gads
pdb|1R1S|C Chain C, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (Lat) By The Adaptor Protein Gads
pdb|1R1S|E Chain E, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (Lat) By The Adaptor Protein Gads
pdb|1R1S|G Chain G, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (Lat) By The Adaptor Protein Gads
Length = 100
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Query: 249 IILEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHY 307
I +E P+ W+ +SR +AE++L +D G F++R S S+ G +++S+ + V+H+
Sbjct: 4 IDIEFPE-WFHEGLSRHQAENLLMGKDI-GFFIIRASQSSPGDFSISVRHE---DDVQHF 58
Query: 308 HIKQNSRGEFFL 319
+ ++++G +FL
Sbjct: 59 KVMRDTKGNYFL 70
>pdb|1E6H|A Chain A, A-Spectrin Sh3 Domain A11v, M25i, V44i, V58l Mutants
Length = 62
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++V+ LY ++ +++++KG +++ T + WWK+ + N G++P+ Y+K+
Sbjct: 7 ELVLVLYDYQEKSPREVTIKKGDILTLLNSTNKDWWKI-EVNDRQGFVPAAYLKK 60
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD-----FIEEAKVMTRLQHQNLVQLY 488
LE+LG+G + V +G + + +KE + ++ I E +M L+H+N+V+LY
Sbjct: 10 LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLY 69
Query: 489 GVCSKHRPIYIV 500
V + +V
Sbjct: 70 DVIHTENKLTLV 81
>pdb|1UJY|A Chain A, Solution Structure Of Sh3 Domain In RacCDC42 GUANINE
Nucleotide Exchange Factor(Gef) 6
Length = 76
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
+V A + FK +LS+ KG V + WW+ NG G+ PSNYV+E
Sbjct: 12 IVKARFNFKQTNEDELSVCKGDIIYVTRVEEGGWWE-GTLNGRTGWFPSNYVRE 64
>pdb|2O2O|A Chain A, Solution Structure Of Domain B From Human Cin85 Protein
Length = 92
Score = 33.9 bits (76), Expect = 0.22, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 141 DLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
+L L+ G EV+ + +E WW+ NG G PSN++KE
Sbjct: 34 ELELKVGDIIEVVGEVEEGWWE-GVLNGKTGMFPSNFIKE 72
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGS-IDVAMMKE---GTMSEDDFIEEAKVMTRLQH 481
ID +L L +L G + +G+W+G+ I V ++K T DF EE + H
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 482 QNLVQLYGVC 491
N++ + G C
Sbjct: 67 PNVLPVLGAC 76
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 213 SDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRV 245
+D W++ VL+WE+ T ++P+ L N E+ +V
Sbjct: 192 ADXWSFAVLLWELVT-REVPFADLSNXEIGXKV 223
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 407 SPCD-RPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS---IDVAMMK-E 461
+P D R V A G + + + E+ LG G+FG V + + + + ++K
Sbjct: 71 APFDHRIVTAKQGAVNSFYTVSKTEI-----LGGGRFGQVHKCEETATGLKLAAKIIKTR 125
Query: 462 GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
G +++ E VM +L H NL+QLY I +V +
Sbjct: 126 GMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVME 166
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD------FIEEAKVMTRLQHQNLVQL 487
L ++G G FG V + + R + +K+ M + + E K++ L+H+N+V L
Sbjct: 22 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNL 81
Query: 488 YGVC-SKHRP-------IYIVTDTSSFRL-GLLAD 513
+C +K P IY+V D L GLL++
Sbjct: 82 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN 116
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD------FIEEAKVMTRLQHQNLVQL 487
L ++G G FG V + + R + +K+ M + + E K++ L+H+N+V L
Sbjct: 23 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 488 YGVC-SKHRP-------IYIVTDTSSFRL-GLLAD 513
+C +K P IY+V D L GLL++
Sbjct: 83 IEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSN 117
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD------FIEEAKVMTRLQHQNLVQL 487
L ++G G FG V + + R + +K+ M + + E K++ L+H+N+V L
Sbjct: 23 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 488 YGVC-SKHRP-------IYIVTDTSSFRL-GLLAD 513
+C +K P IY+V D L GLL++
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN 117
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 421 HDKWEIDPAELM-LLEELGSGQFGVVRRGKWR--GSIDVAMMKEGTMSE--DDFIEEAKV 475
H + ++DP E+ ++ ELG G FG V + K + G++ A + E E +D+I E ++
Sbjct: 2 HVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEI 61
Query: 476 MTRLQHQNLVQLYGV 490
+ H +V+L G
Sbjct: 62 LATCDHPYIVKLLGA 76
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSED------DFIEEAKVMTRLQHQNLVQL 487
L ++G G FG V + + R + +K+ M + + E K++ L+H+N+V L
Sbjct: 23 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 488 YGVC-SKHRP-------IYIVTDTSSFRL-GLLAD 513
+C +K P IY+V D L GLL++
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN 117
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 421 HDKWEIDPAELM-LLEELGSGQFGVVRRGKWR--GSIDVAMMKEGTMSE--DDFIEEAKV 475
H + ++DP E+ ++ ELG G FG V + K + G++ A + E E +D+I E ++
Sbjct: 10 HVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEI 69
Query: 476 MTRLQHQNLVQLYGV 490
+ H +V+L G
Sbjct: 70 LATCDHPYIVKLLGA 84
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 430 ELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKV--MTRLQHQNLVQL 487
++ LLE +G G++G V RG W+G +VA+ + E + E ++ L+H+N++
Sbjct: 9 QITLLECVGKGRYGEVWRGSWQGE-NVAVKIFSSRDEKSWFRETELYNTVMLRHENILGF 67
Query: 488 YG--VCSKHRPIYIVTDTSSFRLGLLAD 513
+ S+H + T +G L D
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYD 95
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 66
Query: 486 QLYGVCSKHRPIYIVTDTSSFRLGLLAD 513
+L V +Y+V + S L D
Sbjct: 67 KLLDVIHTENKLYLVFEFLSMDLKKFMD 94
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 68
Query: 486 QLYGVCSKHRPIYIVTDTSSFRLGLLAD 513
+L V +Y+V + S L D
Sbjct: 69 KLLDVIHTENKLYLVFEFLSMDLKKFMD 96
>pdb|2KXD|A Chain A, The Structure Of Sh3-F2
Length = 73
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 131 LYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
L P+ A G +++++KG +++ T + WWKV + N G++P+ YVK+
Sbjct: 6 LPPYSA-GGREVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKK 53
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 9/66 (13%)
Query: 78 LYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNG------IRKPDQMIRPKVVV 129
L P+ A G +++++KG +++ T + WWKV+ D+ G ++K D ++V+
Sbjct: 6 LPPYSA-GGREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDSGTGKELVL 64
Query: 130 ALYPFK 135
ALY ++
Sbjct: 65 ALYDYQ 70
>pdb|2JMC|A Chain A, Chimer Between Spc-Sh3 And P41
Length = 77
Score = 33.5 bits (75), Expect = 0.32, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 141 DLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
+++++KG +++ T + WWKV + N G++P+ YVK+
Sbjct: 7 EVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKK 45
Score = 31.6 bits (70), Expect = 1.2, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 10/62 (16%)
Query: 88 DLSLEKGAEYEVMDDTQEHWWKVK--DKNG------IRKPDQMIRPKVVVALYPFKAIEG 139
+++++KG +++ T + WWKV+ D+ G ++K D ++V+ALY ++ E
Sbjct: 7 EVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDSGTGKELVLALYDYQ--ES 64
Query: 140 GD 141
GD
Sbjct: 65 GD 66
>pdb|4EY0|A Chain A, Structure Of Tandem Sh2 Domains From Plcgamma1
pdb|4EY0|B Chain B, Structure Of Tandem Sh2 Domains From Plcgamma1
pdb|4EY0|C Chain C, Structure Of Tandem Sh2 Domains From Plcgamma1
pdb|4EY0|D Chain D, Structure Of Tandem Sh2 Domains From Plcgamma1
Length = 246
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQ 311
K WY ++R +AE +L + ++G F+VR + Y +S + +KH ++Q
Sbjct: 122 KEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAE---GKIKHCRVQQ 175
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 18/180 (10%)
Query: 330 EVKDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
E +G F+VR S T G YTLS + H + + + +FFL++ S+ +
Sbjct: 31 ETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGTPKFFLTDNLVFDSLYD 90
Query: 389 VVNYHRH---NSGGLASRLKTSPCDRPVPATAGLSHDKW-----EIDPAELMLLEELGSG 440
++ +++ RL PVP T +W AE ML+ G
Sbjct: 91 LITHYQQVPLRCNEFEMRL-----SEPVPQTNAHESKEWYHASLTRAQAEHMLMRVPRDG 145
Query: 441 QFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAK--VMTRLQHQNLVQLYGVCSKHRPIY 498
F +VR+ S ++ EG + +E + ++ + +LV L KH P+Y
Sbjct: 146 AF-LVRKRNEPNSYAISFRAEGKIKHCRVQQEGQTVMLGNSEFDSLVDLISYYEKH-PLY 203
>pdb|3K2M|A Chain A, Crystal Structure Of Monobody Ha4ABL1 SH2 DOMAIN COMPLEX
pdb|3K2M|B Chain B, Crystal Structure Of Monobody Ha4ABL1 SH2 DOMAIN COMPLEX
Length = 112
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 336 GCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHR 394
G F+VR S S+ G ++SL + V HY I S G+ ++S + +++ E+V++H
Sbjct: 27 GSFLVRESESSPGQRSISLRYE---GRVYHYRINTASDGKLYVSSESRFNTLAELVHHHS 83
Query: 395 HNSGGLASRLKTSPCDRPVPATAGLS 420
+ GL + L R P G+S
Sbjct: 84 TVADGLITTLHYPAPKRNKPTVYGVS 109
>pdb|4FBN|A Chain A, Insights Into Structural Integration Of The Plcgamma
Regulatory Region And Mechanism Of Autoinhibition And
Activation Based On Key Roles Of Sh2 Domains
Length = 246
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 18/180 (10%)
Query: 330 EVKDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
E +G F+VR S T G YTLS + H + + + +FFL++ S+ +
Sbjct: 31 ETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGTPKFFLTDNLVFDSLYD 90
Query: 389 VVNYHRH---NSGGLASRLKTSPCDRPVPATAGLSHDKW-----EIDPAELMLLEELGSG 440
++ +++ RL PVP T +W AE ML+ G
Sbjct: 91 LITHYQQVPLRCNEFEMRL-----SEPVPQTNAHESKEWYHASLTRAQAEHMLMRVPRDG 145
Query: 441 QFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAK--VMTRLQHQNLVQLYGVCSKHRPIY 498
F +VR+ S ++ EG + +E + ++ + +LV L KH P+Y
Sbjct: 146 AF-LVRKRNEPNSYAISFRAEGKIKHCRVQQEGQTVMLGNSEFDSLVDLISYYEKH-PLY 203
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQ 311
K WY ++R +AE +L + ++G F+VR + Y +S + +KH ++Q
Sbjct: 122 KEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAE---GKIKHCRVQQ 175
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD-----FIEEAKVMTRLQHQNLVQLY 488
L++LG G + V +GK + + ++ +KE + ++ I E ++ L+H N+V L+
Sbjct: 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
Query: 489 GVCSKHRPIYIV 500
+ + + +V
Sbjct: 67 DIIHTEKSLTLV 78
>pdb|1X2P|A Chain A, Solution Structure Of The Sh3 Domain Of The Protein
Arginine N-Methyltransferase 2
Length = 68
Score = 33.1 bits (74), Expect = 0.35, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
VA+ + A + LS +G + ++ T WW ++ G GYIP+N+V
Sbjct: 11 VAIADYAATDETQLSFLRGEKILILRQTTADWW-WGERAGCCGYIPANHV 59
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
G L ++L+RH L + LL Q+CKGM YL +HR+
Sbjct: 95 GCLRDFLQRHRARLDASRLLLYSS--QICKGMEYLGSRRCVHRD 136
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 20/23 (86%), Gaps = 1/23 (4%)
Query: 209 FSSKSDVWAYGVLMWEVFT-CGK 230
FS +SDVW++GV+++E+FT C K
Sbjct: 191 FSRQSDVWSFGVVLYELFTYCDK 213
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 430 ELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKV--MTRLQHQNLVQL 487
++ LLE +G G++G V RG W+G +VA+ + E + E ++ L+H+N++
Sbjct: 9 DITLLECVGKGRYGEVWRGSWQGE-NVAVKIFSSRDEKSWFRETELYNTVMLRHENILGF 67
Query: 488 YG--VCSKHRPIYIVTDTSSFRLGLLAD 513
+ S+H + T +G L D
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYD 95
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 20/23 (86%), Gaps = 1/23 (4%)
Query: 209 FSSKSDVWAYGVLMWEVFT-CGK 230
FS +SDVW++GV+++E+FT C K
Sbjct: 194 FSRQSDVWSFGVVLYELFTYCDK 216
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
G L ++L+RH L + LL Q+CKGM YL +HR+
Sbjct: 98 GCLRDFLQRHRARL--DASRLLLYSSQICKGMEYLGSRRCVHRD 139
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 20/23 (86%), Gaps = 1/23 (4%)
Query: 209 FSSKSDVWAYGVLMWEVFT-CGK 230
FS +SDVW++GV+++E+FT C K
Sbjct: 195 FSRQSDVWSFGVVLYELFTYCDK 217
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
G L ++L+RH L + LL Q+CKGM YL +HR+
Sbjct: 99 GCLRDFLQRHRARLDASRLLLYSS--QICKGMEYLGSRRCVHRD 140
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 20/23 (86%), Gaps = 1/23 (4%)
Query: 209 FSSKSDVWAYGVLMWEVFT-CGK 230
FS +SDVW++GV+++E+FT C K
Sbjct: 207 FSRQSDVWSFGVVLYELFTYCDK 229
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
G L ++L+RH L + LL Q+CKGM YL +HR+
Sbjct: 111 GCLRDFLQRHRARLDASRLLLYSS--QICKGMEYLGSRRCVHRD 152
>pdb|2A37|A Chain A, Solution Structure Of The T22g Mutant Of N-Terminal Sh3
Domain Of Drk (Drkn Sh3 Domain)
pdb|2AZV|A Chain A, Solution Structure Of The T22g Mutant Of N-Terminal Sh3
Domain Of Drk (Calculated Without Noes)
Length = 59
Score = 33.1 bits (74), Expect = 0.38, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
+A + F A +LS KG ++++ + W + +G G IPSNY++ K
Sbjct: 4 IAKHDFSATADDELSFRKGQILKILNMEDDSNWYRAELDGKEGLIPSNYIEMK 56
>pdb|3GQI|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 226
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 18/180 (10%)
Query: 330 EVKDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
E +G F+VR S T G YTLS + H + + + +FFL++ S+ +
Sbjct: 31 ETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGTPKFFLTDNLVFDSLYD 90
Query: 389 VVNYHRH---NSGGLASRLKTSPCDRPVPATAGLSHDKW-----EIDPAELMLLEELGSG 440
++ +++ RL PVP T +W AE ML+ G
Sbjct: 91 LITHYQQVPLRCNEFEMRL-----SEPVPQTNAHESKEWYHASLTRAQAEHMLMRVPRDG 145
Query: 441 QFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAK--VMTRLQHQNLVQLYGVCSKHRPIY 498
F +VR+ S ++ EG + +E + ++ + +LV L KH P+Y
Sbjct: 146 AF-LVRKRNEPNSYAISFRAEGKIKHCRVQQEGQTVMLGNSEFDSLVDLISYYEKH-PLY 203
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQ 311
K WY ++R +AE +L + ++G F+VR + Y +S + +KH ++Q
Sbjct: 122 KEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAE---GKIKHCRVQQ 175
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 68
Query: 486 QLYGVCSKHRPIYIVTDTSSFRLGLLAD 513
+L V +Y+V + S L D
Sbjct: 69 KLLDVIHTENKLYLVFEFLSMDLKDFMD 96
>pdb|2EOB|A Chain A, Solution Structure Of The Second Sh2 Domain From Rat Plc
Gamma-2
Length = 124
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
K WY +SR AE +L + ++G F++R Y ++ + VKH I ++ R
Sbjct: 19 KPWYYDRLSRGEAEDMLMRIPRDGAFLIRKREGTDSYAITFRARG---KVKHCRINRDGR 75
Query: 315 GEFFLSEKHCCHSIPEV 331
F L S+ E+
Sbjct: 76 -HFVLGTSAYFESLVEL 91
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 435 EELGSGQFGVVRRGKWRGS---IDVAMMKEGTM-------SEDDFIEEAKVMTRLQHQNL 484
EELGSGQF +VR+ + +G+ +K+ + S ++ E ++ ++H N+
Sbjct: 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 70
Query: 485 VQLYGVCSKHRPIYIVTDTSS 505
+ L+ + + ++ + S
Sbjct: 71 ITLHDIFENKTDVVLILELVS 91
>pdb|2FCI|A Chain A, Structural Basis For The Requirement Of Two
Phosphotyrosines In Signaling Mediated By Syk Tyrosine
Kinase
pdb|2PLD|A Chain A, Nuclear Magnetic Resonance Structure Of An Sh2 Domain Of
Phospholipase C-gamma1 Complexed With A High Affinity
Binding Peptide
pdb|2PLE|A Chain A, Nuclear Magnetic Resonance Structure Of An Sh2 Domain Of
Phospholipase C-Gamma1 Complexed With A High Affinity
Binding Peptide
Length = 105
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 251 LEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIK 310
+ + K WY ++R +AE +L + ++G F+VR + Y +S + +KH ++
Sbjct: 5 IHESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAE---GKIKHCRVQ 61
Query: 311 Q 311
Q
Sbjct: 62 Q 62
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 67
Query: 486 QLYGVCSKHRPIYIVTDTSSFRLGLLAD 513
+L V +Y+V + S L D
Sbjct: 68 KLLDVIHTENKLYLVFEFLSMDLKDFMD 95
>pdb|1H8K|A Chain A, A-Spectrin Sh3 Domain A11v, V23l, M25v, V53i, V58l Mutant
Length = 62
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++V+ LY ++ +++++KG +++ T + WWKV + + G+IP+ Y+K+
Sbjct: 7 ELVLVLYDYQEKSPREVTVKKGDILTLLNSTNKDWWKV-EVDDRQGFIPAAYLKK 60
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 435 EELGSGQFGVVRRGKWRGS---IDVAMMKEGTM-------SEDDFIEEAKVMTRLQHQNL 484
EELGSGQF +VR+ + +G+ +K+ + S ++ E ++ ++H N+
Sbjct: 18 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 77
Query: 485 VQLYGVCSKHRPIYIVTDTSS 505
+ L+ + + ++ + S
Sbjct: 78 ITLHDIFENKTDVVLILELVS 98
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 430 ELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKV--MTRLQHQNLVQL 487
++ LLE +G G++G V RG W+G +VA+ + E + E ++ L+H+N++
Sbjct: 38 QITLLECVGKGRYGEVWRGSWQGE-NVAVKIFSSRDEKSWFRETELYNTVMLRHENILGF 96
Query: 488 YG--VCSKHRPIYIVTDTSSFRLGLLAD 513
+ S+H + T +G L D
Sbjct: 97 IASDMTSRHSSTQLWLITHYHEMGSLYD 124
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 208 RFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
++ K DVW+ GV+++ + G P+G + E++ +V++G
Sbjct: 213 KYDEKCDVWSIGVILF-ILLAGYPPFGGQTDQEILRKVEKG 252
Score = 28.5 bits (62), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Query: 434 LEELGSGQFGVVR--RGKW----RGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQL 487
+++LGSG +G V R K R + T S +EE V+ L H N+++L
Sbjct: 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKL 101
Query: 488 YGVCSKHRPIYIVTD 502
Y R Y+V +
Sbjct: 102 YDFFEDKRNYYLVME 116
>pdb|2O88|A Chain A, Crystal Structure Of The N114a Mutant Of Abl-Sh3 Domain
Complexed With A Designed High-Affinity Peptide Ligand:
Implications For Sh3-Ligand Interactions
pdb|2O88|B Chain B, Crystal Structure Of The N114a Mutant Of Abl-Sh3 Domain
Complexed With A Designed High-Affinity Peptide Ligand:
Implications For Sh3-Ligand Interactions
Length = 58
Score = 32.7 bits (73), Expect = 0.46, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVKDKNGSVGYIPSNYV 178
VALY F A LS+ KG + V+ + W + + KNG G++PS Y+
Sbjct: 4 VALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQ-GWVPSAYI 53
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 435 EELGSGQFGVVRRGKWRGS---IDVAMMKEGTM-------SEDDFIEEAKVMTRLQHQNL 484
EELGSGQF +VR+ + +G+ +K+ + S ++ E ++ ++H N+
Sbjct: 32 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNI 91
Query: 485 VQLYGVCSKHRPIYIVTDTSS 505
+ L+ + + ++ + S
Sbjct: 92 ITLHDIFENKTDVVLILELVS 112
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 433 LLEELGSGQFGVVR------RGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQ 486
LL+ +G G F V+ GK + + + S E ++M L H N+V+
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 487 LYGVCSKHRPIYIVTDTSS 505
L+ V + +Y+V + +S
Sbjct: 78 LFEVIETEKTLYLVMEYAS 96
>pdb|1WI7|A Chain A, Solution Structure Of The Sh3 Domain Of Sh3-Domain Kinase
Binding Protein 1
Length = 68
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 141 DLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
+L L+ G EV+ + +E WW+ NG G PSN++KE
Sbjct: 23 ELELKVGDIIEVVGEVEEGWWE-GVLNGKTGMFPSNFIKE 61
>pdb|3T04|A Chain A, Crystal Structure Of Monobody 7c12ABL1 SH2 DOMAIN COMPLEX
pdb|3UYO|A Chain A, Crystal Structure Of Monobody Sh13ABL1 SH2 DOMAIN COMPLEX
Length = 123
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 335 EGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYH 393
G F+VR S S+ G ++SL + V HY I S G+ ++S + +++ E+V++H
Sbjct: 37 NGSFLVRESESSPGQRSISLRYEG---RVYHYRINTASDGKLYVSSESRFNTLAELVHHH 93
Query: 394 RHNSGGLASRLKTSPCDRPVPATAGLS 420
+ GL + L R P G+S
Sbjct: 94 STVADGLITTLHYPAPKRNKPTVYGVS 120
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 433 LLEELGSGQFGVVR------RGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQ 486
LL+ +G G F V+ GK + + + S E ++M L H N+V+
Sbjct: 11 LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 70
Query: 487 LYGVCSKHRPIYIVTDTSS 505
L+ V + +Y+V + +S
Sbjct: 71 LFEVIETEKTLYLVMEYAS 89
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 433 LLEELGSGQFGVVR------RGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQ 486
LL+ +G G F V+ GK + + + S E ++M L H N+V+
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 487 LYGVCSKHRPIYIVTDTSS 505
L+ V + +Y+V + +S
Sbjct: 78 LFEVIETEKTLYLVMEYAS 96
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 433 LLEELGSGQFGVVR------RGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQ 486
LL+ +G G F V+ GK + + + S E ++M L H N+V+
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 487 LYGVCSKHRPIYIVTDTSS 505
L+ V + +Y+V + +S
Sbjct: 78 LFEVIETEKTLYLVMEYAS 96
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 433 LLEELGSGQFGVVR------RGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQ 486
LL+ +G G F V+ GK + + + S E ++M L H N+V+
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 487 LYGVCSKHRPIYIVTDTSS 505
L+ V + +Y+V + +S
Sbjct: 78 LFEVIETEKTLYLVMEYAS 96
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 433 LLEELGSGQFGVVR------RGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQ 486
LL+ +G G F V+ GK + + + S E ++M L H N+V+
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 487 LYGVCSKHRPIYIVTDTSS 505
L+ V + +Y+V + +S
Sbjct: 78 LFEVIETEKTLYLVMEYAS 96
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDMSRQRAE 268
+ + D W+ GV+M+ V CG P+ + EV+ +++ G K W ++S Q AE
Sbjct: 184 YGPECDEWSAGVMMY-VLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWL--NVSPQ-AE 239
Query: 269 SILKQ 273
S++++
Sbjct: 240 SLIRR 244
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 14/73 (19%)
Query: 443 GVVRRGKWRGSIDVAMMKEGTMSE-------------DDFIEEAKVMTRLQHQNLVQLYG 489
+ RG W G + +A+ K + D F +E ++M L H N+++LY
Sbjct: 15 NTIGRGSW-GEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 490 VCSKHRPIYIVTD 502
+ IY+V +
Sbjct: 74 TFEDNTDIYLVME 86
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDMSRQRAE 268
+ + D W+ GV+M+ V CG P+ + EV+ +++ G K W ++S Q AE
Sbjct: 201 YGPECDEWSAGVMMY-VLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWL--NVSPQ-AE 256
Query: 269 SILKQ 273
S++++
Sbjct: 257 SLIRR 261
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 14/72 (19%)
Query: 444 VVRRGKWRGSIDVAMMKEGTMSE-------------DDFIEEAKVMTRLQHQNLVQLYGV 490
+ RG W G + +A+ K + D F +E ++M L H N+++LY
Sbjct: 33 TIGRGSW-GEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYET 91
Query: 491 CSKHRPIYIVTD 502
+ IY+V +
Sbjct: 92 FEDNTDIYLVME 103
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGS-IDVAMMKE---GTMSEDDFIEEAKVMTRLQH 481
ID +L L +L G + +G+W+G+ I V ++K T DF EE + H
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 482 QNLVQLYGVC 491
N++ + G C
Sbjct: 67 PNVLPVLGAC 76
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Query: 213 SDVWAYGVLMWEVFTCGKMPYGRLKNTEV 241
+D+W++ VL+WE+ T ++P+ L N E+
Sbjct: 192 ADMWSFAVLLWELVT-REVPFADLSNMEI 219
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Query: 430 ELMLLEELGSGQFGVVRR------GKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQN 483
E L E++G G F VVRR G + + K EA++ L+H N
Sbjct: 5 EYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSN 64
Query: 484 LVQLYGVCSKHRPIYIVTD 502
+V+L+ S+ Y+V D
Sbjct: 65 IVRLHDSISEEGFHYLVFD 83
>pdb|3NMZ|D Chain D, Crytal Structure Of Apc Complexed With Asef
pdb|3NMZ|C Chain C, Crytal Structure Of Apc Complexed With Asef
Length = 116
Score = 32.3 bits (72), Expect = 0.58, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
AL+ ++ +L + G EVMD T WW + +G G+ P+++V+
Sbjct: 41 ALWDHVTMDDQELGFKAGDVIEVMDATNREWWWGRVADGE-GWFPASFVR 89
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMT 477
+D +E++G G +GVV + + + + +V +K EG S I E ++
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLK 61
Query: 478 RLQHQNLVQLYGVCSKHRPIYIV 500
L H N+V+L V +Y+V
Sbjct: 62 ELNHPNIVKLLDVIHTENKLYLV 84
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 433 LLEELGSGQFGVVRRGKWRGSID---VAMMKEGTMSEDD---FIEEAKVMTRLQHQNLVQ 486
L EELG G F VVRR + ++ +S D EA++ L+H N+V+
Sbjct: 35 LFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVR 94
Query: 487 LYGVCSKHRPIYIVTD 502
L+ S+ Y+V D
Sbjct: 95 LHDSISEEGFHYLVFD 110
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 64
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 65 KLLDVIHTENKLYLV 79
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 65
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 66 KLLDVIHTENKLYLV 80
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 64
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 65 KLLDVIHTENKLYLV 79
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 66
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 67 KLLDVIHTENKLYLV 81
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 65
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 66 KLLDVIHTENKLYLV 80
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 65
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 66 KLLDVIHTENKLYLV 80
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 65
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 66 KLLDVIHTENKLYLV 80
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 65
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 66 KLLDVIHTENKLYLV 80
>pdb|2CRH|A Chain A, Solution Structure Of The Sh2 Domain Of Human Proto-
Oncogene Protein Vav1
pdb|2ROR|A Chain A, Solution Structure Of The Vav1 Sh2 Domain Complexed With A
Tyrosine-Phosphorylated Peptide From Slp76
Length = 138
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGL-YTLSLYTKVPHPHVKHYHIKQNSRG 315
WY G M R AESIL +G F+VR + +S+ V VKH I + G
Sbjct: 28 WYAGPMERAGAESILANRS-DGTFLVRQRVKDAAEFAISIKYNV---EVKHIKI-MTAEG 82
Query: 316 EFFLSEKHCCHSIPEV 331
+ ++EK + E+
Sbjct: 83 LYRITEKKAFRGLTEL 98
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 67
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 68 KLLDVIHTENKLYLV 82
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 65
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 66 KLLDVIHTENKLYLV 80
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 64
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 65 KLLDVIHTENKLYLV 79
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 64
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 65 KLLDVIHTENKLYLV 79
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 64
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 65 KLLDVIHTENKLYLV 79
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 67
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 68 KLLDVIHTENKLYLV 82
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 66
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 67 KLLDVIHTENKLYLV 81
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 65
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 66 KLLDVIHTENKLYLV 80
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 65
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 66 KLLDVIHTENKLYLV 80
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 66
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 67 KLLDVIHTENKLYLV 81
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 66
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 67 KLLDVIHTENKLYLV 81
>pdb|4GLM|A Chain A, Crystal Structure Of The Sh3 Domain Of Dnmbp Protein [homo
Sapiens]
pdb|4GLM|B Chain B, Crystal Structure Of The Sh3 Domain Of Dnmbp Protein [homo
Sapiens]
pdb|4GLM|C Chain C, Crystal Structure Of The Sh3 Domain Of Dnmbp Protein [homo
Sapiens]
pdb|4GLM|D Chain D, Crystal Structure Of The Sh3 Domain Of Dnmbp Protein [homo
Sapiens]
Length = 72
Score = 32.3 bits (72), Expect = 0.70, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
VALY F+A+E +L E G + ++ ++ W + K G G P +VK
Sbjct: 17 VALYRFQALEPNELDFEVGDKIRILATLEDGWLEGSLK-GRTGIFPYRFVK 66
Score = 28.9 bits (63), Expect = 7.4, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
VALY F+A+E +L E G + ++ ++ W + +K + GI
Sbjct: 17 VALYRFQALEPNELDFEVGDKIRILATLEDGWLEGSLKGRTGI 59
>pdb|2KK6|A Chain A, Solution Structure Of Sh2 Domain Of Proto-Oncogene
Tyrosine- Protein Kinase Fer From Homo Sapiens,
Northeast Structural Genomics Consortium (Nesg) Target
Hr3461d
Length = 116
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSLYT 297
WY G + R A+ +LK K+G F+VR S K G Y LS+Y+
Sbjct: 19 WYHGAIPRIEAQELLK---KQGDFLVRESHGKPGEYVLSVYS 57
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 65
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 66 KLLDVIHTENKLYLV 80
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 68
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 69 KLLDVIHTENKLYLV 83
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 67
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 68 KLLDVIHTENKLYLV 82
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 72
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 73 KLLDVIHTENKLYLV 87
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 72
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 73 KLLDVIHTENKLYLV 87
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 398 GGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEE--LGSGQFGVVRRGKWRGSID 455
G + S++ T V AT G D+ P E+ + +G+G FGVV + K S +
Sbjct: 1 GAMGSKVTT------VVATPGQGPDR----PQEVSYTDTKVIGNGSFGVVYQAKLCDSGE 50
Query: 456 VAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQL 487
+ +K+ + E ++M +L H N+V+L
Sbjct: 51 LVAIKKVLQDKRFKNRELQIMRKLDHCNIVRL 82
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 68
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 69 KLLDVIHTENKLYLV 83
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 68
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 69 KLLDVIHTENKLYLV 83
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 68
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 69 KLLDVIHTENKLYLV 83
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMK--------EGTMSEDDFIEEAKVMTRLQHQNLV 485
+E++G G +GVV + + + + +V +K EG S I E ++ L H N+V
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIV 69
Query: 486 QLYGVCSKHRPIYIV 500
+L V +Y+V
Sbjct: 70 KLLDVIHTENKLYLV 84
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD-----FIEEAKVMTRLQHQNLVQLY 488
LE++G G +GVV + K VA+ + +ED+ I E ++ L H N+V L
Sbjct: 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLI 85
Query: 489 GVCSKHRPIYIV 500
V R + +V
Sbjct: 86 DVIHSERCLTLV 97
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 430 ELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKV--MTRLQHQNLVQL 487
++ +++++G G++G V GKWRG VA+ T E + E ++ ++H+N++
Sbjct: 38 QIQMVKQIGKGRYGEVWMGKWRGE-KVAVKVFFTTEEASWFRETEIYQTVLMRHENILGF 96
Query: 488 YGVCSKH----RPIYIVTD 502
K +Y++TD
Sbjct: 97 IAADIKGTGSWTQLYLITD 115
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD-----FIEEAKVMTRLQHQNLVQLY 488
LE++G G +GVV + K VA+ + +ED+ I E ++ L H N+V L
Sbjct: 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLI 85
Query: 489 GVCSKHRPIYIV 500
V R + +V
Sbjct: 86 DVIHSERCLTLV 97
>pdb|1UFF|A Chain A, Solution Structure Of The First Sh3 Domain Of Human
Intersectin2 (Kiaa1256)
Length = 93
Score = 32.0 bits (71), Expect = 0.79, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDT-QEHWWKVKDKNGSVGYIPSNYVKE 180
ALYPF+A ++S G +V + T E W G+ G+ P NYV++
Sbjct: 10 ALYPFEARNHDEMSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEK 61
>pdb|2LCT|A Chain A, Solution Structure Of The Vav1 Sh2 Domain Complexed With A
Syk-Derived Doubly Phosphorylated Peptide
Length = 107
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGL-YTLSLYTKVPHPHVKHYHIKQNSRG 315
WY G M R AESIL +G F+VR + +S+ V H+K + G
Sbjct: 11 WYAGPMERAGAESILANRS-DGTFLVRQRVKDAAEFAISIKYNVEVKHIK----IMTAEG 65
Query: 316 EFFLSEKHCCHSIPEV 331
+ ++EK + E+
Sbjct: 66 LYRITEKKAFRGLTEL 81
>pdb|1WDX|A Chain A, Yeast Bbc1 Sh3 Domain, Triclinic Crystal Form
pdb|1WDX|B Chain B, Yeast Bbc1 Sh3 Domain, Triclinic Crystal Form
pdb|1WDX|C Chain C, Yeast Bbc1 Sh3 Domain, Triclinic Crystal Form
pdb|1WDX|D Chain D, Yeast Bbc1 Sh3 Domain, Triclinic Crystal Form
Length = 69
Score = 32.0 bits (71), Expect = 0.80, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 115 GIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEV--MDDTQEHWWKVKDKNGSV-- 170
G+ +P+ P VVA +P+K+ DL+ EK E V ++D + ++ + +D NG V
Sbjct: 1 GMSEPEV---PFKVVAQFPYKSDYEDDLNFEKDQEIIVTSVEDAEWYFGEYQDSNGDVIE 57
Query: 171 GYIPSNYV 178
G P ++V
Sbjct: 58 GIFPKSFV 65
>pdb|3U23|A Chain A, Atomic Resolution Crystal Structure Of The 2nd Sh3 Domain
From Human Cd2ap (Cms) In Complex With A Proline-Rich
Peptide From Human Rin3
Length = 65
Score = 32.0 bits (71), Expect = 0.82, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 141 DLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKEL 183
+L L+ G ++ ++ +E WW N +G PSN+VKE E+
Sbjct: 23 ELELKVGDIIDINEEVEEGWWS-GTLNNKLGLFPSNFVKELEV 64
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 435 EELGSGQFGVVRRGKWRGS--------IDVAMMKEGT--MSEDDFIEEAKVMTRLQHQNL 484
EELGSGQF VV++ + + + I K +S +D E ++ +QH N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 485 VQLYGVCSKHRPIYIVTD 502
+ L+ V + ++ +
Sbjct: 77 ITLHEVYENKTDVILILE 94
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Query: 435 EELGSGQFGVVRRGKWRGS-IDVA---MMKEGT------MSEDDFIEEAKVMTRLQHQNL 484
EELGSGQF VV++ + + + + A + K T +S +D E ++ +QH N+
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 485 VQLYGVCSKHRPIYIVTD 502
+ L+ V + ++ +
Sbjct: 76 ITLHEVYENKTDVILILE 93
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Query: 435 EELGSGQFGVVRRGKWRGS-IDVA---MMKEGT------MSEDDFIEEAKVMTRLQHQNL 484
EELGSGQF VV++ + + + + A + K T +S +D E ++ +QH N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 485 VQLYGVCSKHRPIYIVTD 502
+ L+ V + ++ +
Sbjct: 77 ITLHEVYENKTDVILILE 94
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Query: 435 EELGSGQFGVVRRGKWRGS-IDVA---MMKEGT------MSEDDFIEEAKVMTRLQHQNL 484
EELGSGQF VV++ + + + + A + K T +S +D E ++ +QH N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 485 VQLYGVCSKHRPIYIVTD 502
+ L+ V + ++ +
Sbjct: 77 ITLHEVYENKTDVILILE 94
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Query: 435 EELGSGQFGVVRRGKWRGS-IDVA---MMKEGT------MSEDDFIEEAKVMTRLQHQNL 484
EELGSGQF VV++ + + + + A + K T +S +D E ++ +QH N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 485 VQLYGVCSKHRPIYIVTD 502
+ L+ V + ++ +
Sbjct: 77 ITLHEVYENKTDVILILE 94
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 435 EELGSGQFGVVRRGKWRGS--------IDVAMMKEGT--MSEDDFIEEAKVMTRLQHQNL 484
EELGSGQF VV++ + + + I K +S +D E ++ +QH N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 485 VQLYGVCSKHRPIYIVTD 502
+ L+ V + ++ +
Sbjct: 77 ITLHEVYENKTDVILILE 94
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPY 233
+V+N S +D W+YGVLM+E+ T G +P+
Sbjct: 200 EVVNRQGHSHSADWWSYGVLMFEMLT-GSLPF 230
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Query: 435 EELGSGQFGVVRRGKWRGS-IDVA---MMKEGT------MSEDDFIEEAKVMTRLQHQNL 484
EELGSGQF VV++ + + + + A + K T +S +D E ++ +QH N+
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 485 VQLYGVCSKHRPIYIVTD 502
+ L+ V + ++ +
Sbjct: 76 ITLHEVYENKTDVILILE 93
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 32.0 bits (71), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Query: 435 EELGSGQFGVVRRGKWRGS-IDVA---MMKEGT------MSEDDFIEEAKVMTRLQHQNL 484
EELGSGQF VV++ + + + + A + K T +S +D E ++ +QH N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 485 VQLYGVCSKHRPIYIVTD 502
+ L+ V + ++ +
Sbjct: 77 ITLHEVYENKTDVILILE 94
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 32.0 bits (71), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Query: 435 EELGSGQFGVVRRGKWRGS-IDVA---MMKEGT------MSEDDFIEEAKVMTRLQHQNL 484
EELGSGQF VV++ + + + + A + K T +S +D E ++ +QH N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 485 VQLYGVCSKHRPIYIVTD 502
+ L+ V + ++ +
Sbjct: 77 ITLHEVYENKTDVILILE 94
>pdb|1TG0|A Chain A, 0.97-A Structure Of The Sh3 Domain Of Bbc1
pdb|1ZUK|A Chain A, Yeast Bbc1 Sh3 Domain Complexed With A Peptide From Las17
pdb|1ZUK|B Chain B, Yeast Bbc1 Sh3 Domain Complexed With A Peptide From Las17
Length = 68
Score = 32.0 bits (71), Expect = 0.92, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEV--MDDTQEHWWKVKDKNGSV--GYIPSNYV 178
P VVA +P+K+ DL+ EK E V ++D + ++ + +D NG V G P ++V
Sbjct: 7 PFKVVAQFPYKSDYEDDLNFEKDQEIIVTSVEDAEWYFGEYQDSNGDVIEGIFPKSFV 64
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Query: 435 EELGSGQFGVVRRGKWRGS-IDVA---MMKEGT------MSEDDFIEEAKVMTRLQHQNL 484
EELGSGQF VV++ + + + + A + K T +S +D E ++ +QH N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 485 VQLYGVCSKHRPIYIVTD 502
+ L+ V + ++ +
Sbjct: 77 ITLHEVYENKTDVILILE 94
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Query: 433 LLEELGSGQFGVVRRGKWRGS--------IDVAMMKEGT-MSEDDFIEEAKVMTRLQHQN 483
L E +G G F VVRR R + +DVA +S +D EA + L+H +
Sbjct: 28 LCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPH 87
Query: 484 LVQLYGVCSKHRPIYIV 500
+V+L S +Y+V
Sbjct: 88 IVELLETYSSDGMLYMV 104
>pdb|2PZ1|A Chain A, Crystal Structure Of Auto-Inhibited Asef
Length = 466
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
AL+ ++ +L + G EVMD T WW + +G G+ P+++V+
Sbjct: 35 ALWDHVTMDDQELGFKAGDVIEVMDATNREWWWGRVADGE-GWFPASFVR 83
>pdb|2SHP|A Chain A, Tyrosine Phosphatase Shp-2
pdb|2SHP|B Chain B, Tyrosine Phosphatase Shp-2
Length = 525
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYT 297
W+ G +S + AE +L ++ K G F+VR S S G + LS+ T
Sbjct: 112 WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRT 153
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 12/76 (15%)
Query: 434 LEELGSGQFGVV--RRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNL 484
+E++G G +GVV R K G + VA+ K EG S I E ++ L H N+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEV-VALXKIRLDTETEGVPSTA--IREISLLKELNHPNI 64
Query: 485 VQLYGVCSKHRPIYIV 500
V+L V +Y+V
Sbjct: 65 VKLLDVIHTENKLYLV 80
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 12/76 (15%)
Query: 434 LEELGSGQFGVV--RRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNL 484
+E++G G +GVV R K G + VA+ K EG S I E ++ L H N+
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEV-VALXKIRLDTETEGVPSTA--IREISLLKELNHPNI 63
Query: 485 VQLYGVCSKHRPIYIV 500
V+L V +Y+V
Sbjct: 64 VKLLDVIHTENKLYLV 79
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 435 EELGSGQFGVVRRGKWRGS-IDVA---MMKEGT------MSEDDFIEEAKVMTRLQHQNL 484
EELGSGQF VV++ + + + + A + K T +S +D E ++ +QH N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 485 VQLYGVCSKHRPIYIV 500
+ L+ V + ++
Sbjct: 77 ITLHEVYENKTDVILI 92
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Query: 433 LLEELGSGQFGVVRRGKWRGS--------IDVAMMKEGT-MSEDDFIEEAKVMTRLQHQN 483
L E +G G F VVRR R + +DVA +S +D EA + L+H +
Sbjct: 28 LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPH 87
Query: 484 LVQLYGVCSKHRPIYIV 500
+V+L S +Y+V
Sbjct: 88 IVELLETYSSDGMLYMV 104
>pdb|2KRN|A Chain A, High Resolution Structure Of The Second Sh3 Domain Of
Cd2ap
Length = 60
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
L+ + +L L G +V+++ +E WW N +G PSN+VKE E
Sbjct: 9 VLFDYSPQNEDELELIVGDVIDVIEEVEEGWWS-GTLNNKLGLFPSNFVKELE 60
>pdb|1X6C|A Chain A, Solution Structures Of The Sh2 Domain Of Human Protein-
Tyrosine Phosphatase Shp-1
pdb|2YU7|A Chain A, Solution Structure Of The Shp-1 C-Terminal Sh2 Domain
Complexed With A Tyrosine-Phosphorylated Peptide From
Nkg2a
pdb|2RMX|A Chain A, Solution Structure Of The Shp-1 C-Terminal Sh2 Domain
Complexed With A Tyrosine-Phosphorylated Peptide From
Nkg2a
Length = 118
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVP 300
WY G MS +AE++L+ + + F+VR S S G + LS+ + P
Sbjct: 6 SGWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQP 52
>pdb|1TZQ|A Chain A, Crystal Structure Of The Equinatoxin Ii 8-69 Double
Cysteine Mutant
Length = 175
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 49/124 (39%), Gaps = 5/124 (4%)
Query: 19 GNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVV--- 75
GNV + + + G + + Y T + P + +L+ Q R V
Sbjct: 23 GNVKRKIAVGVDNESGKTWTALNTYFRSGTSDIVLPHKVPHGCALLYNGQKDRGPVATGA 82
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFK 135
V + + +G L++ Y+ + +WW V+ G R+ DQ + ++ L PF+
Sbjct: 83 VGVLAYLMSDGNTLAVLFSVPYDY--NWYSNWWNVRIYKGKRRADQRMYEELYYNLSPFR 140
Query: 136 AIEG 139
G
Sbjct: 141 GDNG 144
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Query: 435 EELGSGQFGVVRRGKWRGS-IDVA---MMKEGT------MSEDDFIEEAKVMTRLQHQNL 484
EELGSGQF VV++ + + + + A + K T +S +D E ++ +QH N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 485 VQLYGVCSKHRPIYIVTD 502
+ L+ V + ++ +
Sbjct: 77 ITLHEVYENKTDVILILE 94
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGI-ILEKPKAWYVGD 261
+LN+ R++ D+W+ G +M E+ T + K ++ +D+++ + + P A +V
Sbjct: 197 ILNWMRYTQTVDIWSVGCIMAEMITGKTL----FKGSDHLDQLKEIMKVTGTPPAEFVQR 252
Query: 262 MSRQRAESILKQ----EDKEGCFVVRNSS 286
+ A++ +K E K+ ++ N+S
Sbjct: 253 LQSDEAKNYMKGLPELEKKDFASILTNAS 281
>pdb|1TUC|A Chain A, Alpha-Spectrin Src Homology 3 Domain, Circular Permutant,
Cut At S19-P20
Length = 63
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 141 DLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
+++++KG +++ T + WWKV + N G++P+ YVK+
Sbjct: 5 EVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKK 43
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Query: 433 LLEELGSGQFGVVRRGKWRGS--------IDVAMMKEGT-MSEDDFIEEAKVMTRLQHQN 483
L E +G G F VVRR R + +DVA +S +D EA + L+H +
Sbjct: 30 LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPH 89
Query: 484 LVQLYGVCSKHRPIYIV 500
+V+L S +Y+V
Sbjct: 90 IVELLETYSSDGMLYMV 106
>pdb|2GNC|A Chain A, Crystal Structure Of Srgap1 Sh3 Domain In The Slit-Robo
Signaling Pathway
pdb|2GNC|B Chain B, Crystal Structure Of Srgap1 Sh3 Domain In The Slit-Robo
Signaling Pathway
Length = 60
Score = 31.6 bits (70), Expect = 1.2, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
P+ +A + + +LS +KGA + E WW+ + NG G +P Y+
Sbjct: 6 PEFAIAKFDYVGRSARELSFKKGASLLLYHRASEDWWEGR-HNGIDGLVPHQYI 58
>pdb|2ED0|A Chain A, Solution Structure Of The Sh3 Domain Of Abl Interactor 2
(Abelson Interactor 2)
Length = 78
Score = 31.2 bits (69), Expect = 1.3, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
VVA+Y + + +LS ++GA V+ + W++ NG G P NYV+
Sbjct: 20 VVAIYDYTKDKEDELSFQEGAIIYVIKKNDDGWYE-GVMNGVTGLFPGNYVE 70
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKM-PYGRLKNTEVVDRVQRG 248
+N ++ KSD+W+ G L++E+ C M P+ E+ +++ G
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYEL--CALMPPFTAFSQKELAGKIREG 231
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKM-PYGRLKNTEVVDRVQRG 248
+N ++ KSD+W+ G L++E+ C M P+ E+ +++ G
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYEL--CALMPPFTAFSQKELAGKIREG 231
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKM-PYGRLKNTEVVDRVQRG 248
+N ++ KSD+W+ G L++E+ C M P+ E+ +++ G
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYEL--CALMPPFTAFSQKELAGKIREG 231
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + R S + +K E E E ++ + L+H N+++LYG
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 80 YFHDATRVYLILE 92
>pdb|1M61|A Chain A, Crystal Structure Of The Apo Sh2 Domains Of Zap-70
Length = 259
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 335 EGCFVVRNSSTKGLYTLSL-YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYH 393
+G F++R +G Y LSL Y K V HY I Q+ G++ + E ++ ++V Y
Sbjct: 187 DGKFLLRPRKEQGTYALSLIYGKT----VYHYLISQDKAGKYCIPEGTKFDTLWQLVEYL 242
Query: 394 RHNSGGLASRLKTS 407
+ + GL LK +
Sbjct: 243 KLKADGLIYCLKEA 256
>pdb|2OQ1|A Chain A, Tandem Sh2 Domains Of Zap-70 With 19-Mer Zeta1 Peptide
Length = 254
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 335 EGCFVVRNSSTKGLYTLSL-YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYH 393
+G F++R +G Y LSL Y K V HY I Q+ G++ + E ++ ++V Y
Sbjct: 182 DGKFLLRPRKEQGTYALSLIYGKT----VYHYLISQDKAGKYCIPEGTKFDTLWQLVEYL 237
Query: 394 RHNSGGLASRLKTS 407
+ + GL LK +
Sbjct: 238 KLKADGLIYCLKEA 251
>pdb|1IAZ|A Chain A, Equinatoxin Ii
pdb|1IAZ|B Chain B, Equinatoxin Ii
Length = 179
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 49/124 (39%), Gaps = 5/124 (4%)
Query: 19 GNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVV--- 75
GNV + + + G + + Y T + P + +L+ Q R V
Sbjct: 27 GNVKRKIAVGVDNESGKTWTALNTYFRSGTSDIVLPHKVPHGKALLYNGQKDRGPVATGA 86
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFK 135
V + + +G L++ Y+ + +WW V+ G R+ DQ + ++ L PF+
Sbjct: 87 VGVLAYLMSDGNTLAVLFSVPYDY--NWYSNWWNVRIYKGKRRADQRMYEELYYNLSPFR 144
Query: 136 AIEG 139
G
Sbjct: 145 GDNG 148
>pdb|1KD6|A Chain A, Solution Structure Of The Eukaryotic Pore-Forming
Cytolysin Equinatoxin Ii
Length = 179
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 49/124 (39%), Gaps = 5/124 (4%)
Query: 19 GNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVV--- 75
GNV + + + G + + Y T + P + +L+ Q R V
Sbjct: 27 GNVKRKIAVGVDNESGKTWTALNTYFRSGTSDIVLPHKVPHGKALLYNGQKDRGPVATGA 86
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFK 135
V + + +G L++ Y+ + +WW V+ G R+ DQ + ++ L PF+
Sbjct: 87 VGVLAYLMSDGNTLAVLFSVPYDY--NWYSNWWNVRIYKGKRRADQRMYEELYYNLSPFR 144
Query: 136 AIEG 139
G
Sbjct: 145 GDNG 148
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + R S + +K E E E ++ + L+H N+++LYG
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 80 YFHDATRVYLILE 92
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
S++DVW+ G+L++ V CG +P+ + ++ RG
Sbjct: 187 LGSEADVWSMGILLY-VLMCGFLPFDDDNVMALYKKIMRG 225
>pdb|2X3W|D Chain D, Structure Of Mouse Syndapin I (Crystal Form 2)
pdb|2X3X|D Chain D, Structure Of Mouse Syndapin I (Crystal Form 1)
pdb|2X3X|E Chain E, Structure Of Mouse Syndapin I (Crystal Form 1)
Length = 60
Score = 31.2 bits (69), Expect = 1.5, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH-WWKVKDKNGSVGYIPSNYVK 179
V ALY + E +LS + G E + + E W + + +G +G P+NYV+
Sbjct: 6 VRALYDYDGQEQDELSFKAGDELTKLGEEDEQGWCRGRLDSGQLGLYPANYVE 58
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 413 VPATAGLSHDKWEIDPAELMLLEE--LGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFI 470
V AT G D+ P E+ + +G+G FGVV + K S ++ +K+ +
Sbjct: 6 VVATPGQGPDR----PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN 61
Query: 471 EEAKVMTRLQHQNLVQL 487
E ++M +L H N+V+L
Sbjct: 62 RELQIMRKLDHCNIVRL 78
>pdb|2EQI|A Chain A, Solution Structure Of The Sh3 Domain From Phospholipase C,
Gamma 2
Length = 69
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
+ V ALY +KA +L+ +GA + WWK Y PSNYV++
Sbjct: 8 RTVKALYDYKAKRSDELTFCRGALIHNVSKEPGGWWKGDYGTRIQQYFPSNYVED 62
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 413 VPATAGLSHDKWEIDPAELMLLEE--LGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFI 470
V AT G D+ P E+ + +G+G FGVV + K S ++ +K+ +
Sbjct: 6 VVATPGQGPDR----PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 61
Query: 471 EEAKVMTRLQHQNLVQL 487
E ++M +L H N+V+L
Sbjct: 62 RELQIMRKLDHCNIVRL 78
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 413 VPATAGLSHDKWEIDPAELMLLEE--LGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFI 470
V AT G D+ P E+ + +G+G FGVV + K S ++ +K+ +
Sbjct: 6 VVATPGQGPDR----PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 61
Query: 471 EEAKVMTRLQHQNLVQL 487
E ++M +L H N+V+L
Sbjct: 62 RELQIMRKLDHCNIVRL 78
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 413 VPATAGLSHDKWEIDPAELMLLEE--LGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFI 470
V AT G D+ P E+ + +G+G FGVV + K S ++ +K+ +
Sbjct: 6 VVATPGQGPDR----PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 61
Query: 471 EEAKVMTRLQHQNLVQL 487
E ++M +L H N+V+L
Sbjct: 62 RELQIMRKLDHCNIVRL 78
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 413 VPATAGLSHDKWEIDPAELMLLEE--LGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFI 470
V AT G D+ P E+ + +G+G FGVV + K S ++ +K+ +
Sbjct: 6 VVATPGQGPDR----PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN 61
Query: 471 EEAKVMTRLQHQNLVQL 487
E ++M +L H N+V+L
Sbjct: 62 RELQIMRKLDHCNIVRL 78
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 413 VPATAGLSHDKWEIDPAELMLLEE--LGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFI 470
V AT G D+ P E+ + +G+G FGVV + K S ++ +K+ +
Sbjct: 6 VVATPGQGPDR----PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN 61
Query: 471 EEAKVMTRLQHQNLVQL 487
E ++M +L H N+V+L
Sbjct: 62 RELQIMRKLDHCNIVRL 78
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 413 VPATAGLSHDKWEIDPAELMLLEE--LGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFI 470
V AT G D+ P E+ + +G+G FGVV + K S ++ +K+ +
Sbjct: 7 VVATPGQGPDR----PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 62
Query: 471 EEAKVMTRLQHQNLVQL 487
E ++M +L H N+V+L
Sbjct: 63 RELQIMRKLDHCNIVRL 79
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 413 VPATAGLSHDKWEIDPAELMLLEE--LGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFI 470
V AT G D+ P E+ + +G+G FGVV + K S ++ +K+ +
Sbjct: 14 VVATPGQGPDR----PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 69
Query: 471 EEAKVMTRLQHQNLVQL 487
E ++M +L H N+V+L
Sbjct: 70 RELQIMRKLDHCNIVRL 86
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 413 VPATAGLSHDKWEIDPAELMLLEE--LGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFI 470
V AT G D+ P E+ + +G+G FGVV + K S ++ +K+ +
Sbjct: 6 VVATPGQGPDR----PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 61
Query: 471 EEAKVMTRLQHQNLVQL 487
E ++M +L H N+V+L
Sbjct: 62 RELQIMRKLDHCNIVRL 78
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 413 VPATAGLSHDKWEIDPAELMLLEE--LGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFI 470
V AT G D+ P E+ + +G+G FGVV + K S ++ +K+ +
Sbjct: 18 VVATPGQGPDR----PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 73
Query: 471 EEAKVMTRLQHQNLVQL 487
E ++M +L H N+V+L
Sbjct: 74 RELQIMRKLDHCNIVRL 90
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 413 VPATAGLSHDKWEIDPAELMLLEE--LGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFI 470
V AT G D+ P E+ + +G+G FGVV + K S ++ +K+ +
Sbjct: 19 VVATPGQGPDR----PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 74
Query: 471 EEAKVMTRLQHQNLVQL 487
E ++M +L H N+V+L
Sbjct: 75 RELQIMRKLDHCNIVRL 91
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 413 VPATAGLSHDKWEIDPAELMLLEE--LGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFI 470
V AT G D+ P E+ + +G+G FGVV + K S ++ +K+ +
Sbjct: 25 VVATPGQGPDR----PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 80
Query: 471 EEAKVMTRLQHQNLVQL 487
E ++M +L H N+V+L
Sbjct: 81 RELQIMRKLDHCNIVRL 97
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ + L+H N+++LYG
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 76 YFHDSTRVYLILE 88
>pdb|2B3O|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase Shp-1
Length = 532
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVP 300
WY G MS +AE++L+ + + F+VR S S G + LS+ + P
Sbjct: 110 WYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQP 154
>pdb|1G2B|A Chain A, Alpha-Spectrin Src Homology 3 Domain, Circular Permutant,
Cut At N47-D48
pdb|1TUD|A Chain A, Alpha-Spectrin Src Homology 3 Domain, Circular Permutant,
Cut At N47-D48
Length = 62
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 30/49 (61%)
Query: 116 IRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 164
++K D ++V+ALY ++ +++++KG +++ T + WWKV+
Sbjct: 12 VKKLDSGTGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVE 60
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 26/39 (66%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
++V+ALY ++ +++++KG +++ T + WWKV+
Sbjct: 22 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVE 60
>pdb|2YSX|A Chain A, Solution Structure Of The Human Ship Sh2 Domain
Length = 119
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
Query: 256 AWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKG-------LYTLSLYTKVPHPHVKHYH 308
W G+++R +AE +L + K+G F+VR S + LY +YT P+
Sbjct: 11 CWNHGNITRSKAEELLSRTGKDGSFLVRASESISRAYALCVLYRNCVYTYRILPNEDDKF 70
Query: 309 IKQNSRG 315
Q S G
Sbjct: 71 TVQASEG 77
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 435 EELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRL-QHQNLVQLYGVCSK 493
E++G G + V +R + + +K S+ D EE +++ R QH N++ L V
Sbjct: 28 EDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDD 87
Query: 494 HRPIYIVTD 502
+ +Y+VT+
Sbjct: 88 GKYVYVVTE 96
>pdb|3LIM|A Chain A, Crystal Structure Of The Pore Forming Toxin Frac From Sea
Anemone Actinia Fragacea
pdb|3LIM|B Chain B, Crystal Structure Of The Pore Forming Toxin Frac From Sea
Anemone Actinia Fragacea
pdb|3LIM|C Chain C, Crystal Structure Of The Pore Forming Toxin Frac From Sea
Anemone Actinia Fragacea
pdb|3LIM|D Chain D, Crystal Structure Of The Pore Forming Toxin Frac From Sea
Anemone Actinia Fragacea
pdb|3LIM|E Chain E, Crystal Structure Of The Pore Forming Toxin Frac From Sea
Anemone Actinia Fragacea
pdb|3LIM|F Chain F, Crystal Structure Of The Pore Forming Toxin Frac From Sea
Anemone Actinia Fragacea
Length = 178
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 49/124 (39%), Gaps = 5/124 (4%)
Query: 19 GNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKV---V 75
GNV + + I G + + Y T + P + +L+ Q R V V
Sbjct: 26 GNVKRKIAVGIDNESGKTWTAMNTYFRSGTSDIVLPHKVAHGKALLYNGQKNRGPVATGV 85
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFK 135
V + + +G L++ Y+ + +WW V+ G ++ DQ + ++ PF+
Sbjct: 86 VGVIAYSMSDGNTLAVLFSVPYDY--NWYSNWWNVRVYKGQKRADQRMYEELYYHRSPFR 143
Query: 136 AIEG 139
G
Sbjct: 144 GDNG 147
>pdb|3ZWG|A Chain A, Crystal Structure Of The Pore-Forming Toxin Frac From
Actinia Fragacea (Form 2)
pdb|3ZWG|B Chain B, Crystal Structure Of The Pore-Forming Toxin Frac From
Actinia Fragacea (Form 2)
pdb|3ZWG|C Chain C, Crystal Structure Of The Pore-Forming Toxin Frac From
Actinia Fragacea (Form 2)
pdb|3ZWG|D Chain D, Crystal Structure Of The Pore-Forming Toxin Frac From
Actinia Fragacea (Form 2)
pdb|3ZWG|E Chain E, Crystal Structure Of The Pore-Forming Toxin Frac From
Actinia Fragacea (Form 2)
pdb|3ZWG|F Chain F, Crystal Structure Of The Pore-Forming Toxin Frac From
Actinia Fragacea (Form 2)
pdb|3ZWG|G Chain G, Crystal Structure Of The Pore-Forming Toxin Frac From
Actinia Fragacea (Form 2)
pdb|3ZWG|H Chain H, Crystal Structure Of The Pore-Forming Toxin Frac From
Actinia Fragacea (Form 2)
pdb|3ZWG|I Chain I, Crystal Structure Of The Pore-Forming Toxin Frac From
Actinia Fragacea (Form 2)
pdb|3ZWG|J Chain J, Crystal Structure Of The Pore-Forming Toxin Frac From
Actinia Fragacea (Form 2)
pdb|3ZWG|K Chain K, Crystal Structure Of The Pore-Forming Toxin Frac From
Actinia Fragacea (Form 2)
pdb|3ZWG|L Chain L, Crystal Structure Of The Pore-Forming Toxin Frac From
Actinia Fragacea (Form 2)
pdb|3ZWG|M Chain M, Crystal Structure Of The Pore-Forming Toxin Frac From
Actinia Fragacea (Form 2)
pdb|3ZWG|N Chain N, Crystal Structure Of The Pore-Forming Toxin Frac From
Actinia Fragacea (Form 2)
pdb|3ZWG|O Chain O, Crystal Structure Of The Pore-Forming Toxin Frac From
Actinia Fragacea (Form 2)
pdb|3ZWJ|A Chain A, Crystal Structure Of The Pore-Forming Toxin Frac From
Actinia Fragacea (Form 3)
pdb|3ZWJ|B Chain B, Crystal Structure Of The Pore-Forming Toxin Frac From
Actinia Fragacea (Form 3)
pdb|3ZWJ|C Chain C, Crystal Structure Of The Pore-Forming Toxin Frac From
Actinia Fragacea (Form 3)
pdb|3ZWJ|D Chain D, Crystal Structure Of The Pore-Forming Toxin Frac From
Actinia Fragacea (Form 3)
pdb|3ZWJ|E Chain E, Crystal Structure Of The Pore-Forming Toxin Frac From
Actinia Fragacea (Form 3)
pdb|3ZWJ|F Chain F, Crystal Structure Of The Pore-Forming Toxin Frac From
Actinia Fragacea (Form 3)
pdb|3ZWJ|G Chain G, Crystal Structure Of The Pore-Forming Toxin Frac From
Actinia Fragacea (Form 3)
pdb|3ZWJ|H Chain H, Crystal Structure Of The Pore-Forming Toxin Frac From
Actinia Fragacea (Form 3)
pdb|3ZWJ|I Chain I, Crystal Structure Of The Pore-Forming Toxin Frac From
Actinia Fragacea (Form 3)
Length = 179
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 49/124 (39%), Gaps = 5/124 (4%)
Query: 19 GNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKV---V 75
GNV + + I G + + Y T + P + +L+ Q R V V
Sbjct: 27 GNVKRKIAVGIDNESGKTWTAMNTYFRSGTSDIVLPHKVAHGKALLYNGQKNRGPVATGV 86
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFK 135
V + + +G L++ Y+ + +WW V+ G ++ DQ + ++ PF+
Sbjct: 87 VGVIAYSMSDGNTLAVLFSVPYDY--NWYSNWWNVRVYKGQKRADQRMYEELYYHRSPFR 144
Query: 136 AIEG 139
G
Sbjct: 145 GDNG 148
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 413 VPATAGLSHDKWEIDPAELMLLEE--LGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFI 470
V AT G D+ P E+ + +G+G FGVV + K S ++ +K+ +
Sbjct: 34 VVATPGQGPDR----PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 89
Query: 471 EEAKVMTRLQHQNLVQL 487
E ++M +L H N+V+L
Sbjct: 90 RELQIMRKLDHCNIVRL 106
>pdb|3PS5|A Chain A, Crystal Structure Of The Full-Length Human Protein
Tyrosine Phosphatase Shp-1
Length = 595
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVP 300
WY G MS +AE++L+ + + F+VR S S G + LS+ + P
Sbjct: 110 WYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQP 154
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 415 ATAGLSHDKWEIDPAELMLLEELGSGQFGVV-----RRGKWRGSIDV----AMMKEGTMS 465
A A + K+ ID + ++ LG G+FG V ++ K+ ++ V + KEG
Sbjct: 2 ALAEMPKRKFTID--DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV-- 57
Query: 466 EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTS 504
E E ++ + L+H N++++Y + IY++ + +
Sbjct: 58 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFA 96
>pdb|2CS0|A Chain A, Solution Structure Of The Sh2 Domain Of Human Hsh2d
Protein
Length = 119
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE 316
W+ G +SR+ AE++L+ + G F++R S + YTLS + H+ +K G
Sbjct: 18 WFHGAISREDAENLLESQPL-GSFLIRVSHSHVGYTLSYKAQS---SCCHFMVKLLDDGT 73
Query: 317 FFLSEKHCCHS 327
F + + H+
Sbjct: 74 FMIPGEKVAHT 84
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 413 VPATAGLSHDKWEIDPAELMLLEE--LGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFI 470
V AT G D+ P E+ + +G+G FGVV + K S ++ +K+ +
Sbjct: 18 VVATPGQGPDR----PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 73
Query: 471 EEAKVMTRLQHQNLVQL 487
E ++M +L H N+V+L
Sbjct: 74 RELQIMRKLDHCNIVRL 90
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 413 VPATAGLSHDKWEIDPAELMLLEE--LGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFI 470
V AT G D+ P E+ + +G+G FGVV + K S ++ +K+ +
Sbjct: 11 VVATPGQGPDR----PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 66
Query: 471 EEAKVMTRLQHQNLVQL 487
E ++M +L H N+V+L
Sbjct: 67 RELQIMRKLDHCNIVRL 83
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 413 VPATAGLSHDKWEIDPAELMLLEE--LGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFI 470
V AT G D+ P E+ + +G+G FGVV + K S ++ +K+ +
Sbjct: 40 VVATPGQGPDR----PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 95
Query: 471 EEAKVMTRLQHQNLVQL 487
E ++M +L H N+V+L
Sbjct: 96 RELQIMRKLDHCNIVRL 112
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 413 VPATAGLSHDKWEIDPAELMLLEE--LGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFI 470
V AT G D+ P E+ + +G+G FGVV + K S ++ +K+ +
Sbjct: 42 VVATPGQGPDR----PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 97
Query: 471 EEAKVMTRLQHQNLVQL 487
E ++M +L H N+V+L
Sbjct: 98 RELQIMRKLDHCNIVRL 114
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 413 VPATAGLSHDKWEIDPAELMLLEE--LGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFI 470
V AT G D+ P E+ + +G+G FGVV + K S ++ +K+ +
Sbjct: 85 VVATPGQGPDR----PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 140
Query: 471 EEAKVMTRLQHQNLVQL 487
E ++M +L H N+V+L
Sbjct: 141 RELQIMRKLDHCNIVRL 157
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 413 VPATAGLSHDKWEIDPAELMLLEE--LGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFI 470
V AT G D+ P E+ + +G+G FGVV + K S ++ +K+ +
Sbjct: 44 VVATPGQGPDR----PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 99
Query: 471 EEAKVMTRLQHQNLVQL 487
E ++M +L H N+V+L
Sbjct: 100 RELQIMRKLDHCNIVRL 116
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Query: 433 LLEELGSGQFGVVR------RGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQ 486
LL+ +G G F V+ GK + + + S E ++ L H N+V+
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVK 77
Query: 487 LYGVCSKHRPIYIVTDTSS 505
L+ V + +Y+V + +S
Sbjct: 78 LFEVIETEKTLYLVXEYAS 96
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 413 VPATAGLSHDKWEIDPAELMLLEE--LGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFI 470
V AT G D+ P E+ + +G+G FGVV + K S ++ +K+ +
Sbjct: 40 VVATPGQGPDR----PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 95
Query: 471 EEAKVMTRLQHQNLVQL 487
E ++M +L H N+V+L
Sbjct: 96 RELQIMRKLDHCNIVRL 112
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 436 ELGSGQFGVVRRGKWRGS----IDVAMMKEGTMSEDDFIE-EAKVMTRLQHQNLVQLYGV 490
+LGSG FG V + R S + + K+ + + IE E +V+ L H N+++++ V
Sbjct: 29 KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEV 88
Query: 491 CSKHRPIYIVTDT 503
+ +YIV +T
Sbjct: 89 FEDYHNMYIVMET 101
>pdb|1K4U|S Chain S, Solution Structure Of The C-Terminal Sh3 Domain Of P67phox
Complexed With The C-Terminal Tail Region Of P47phox
Length = 62
Score = 30.4 bits (67), Expect = 2.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 121 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
Q+ + V AL+ ++A + DL ++G V+ E W + + K G VG P +V++
Sbjct: 1 QLKKGSQVEALFSYEATQPEDLEFQEGDIILVLSKVNEEWLEGESK-GKVGIFPKVFVED 59
>pdb|2KRM|A Chain A, Rdc Refined Solution Structure Of The First Sh3 Domain Of
Cd2ap
Length = 57
Score = 30.4 bits (67), Expect = 2.4, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 132 YPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
Y + A+ +L++ G + QE W + NG G P N+VKE
Sbjct: 7 YDYDAVHDDELTIRVGEIIRNVKKLQEEGWLEGELNGRRGMFPDNFVKE 55
>pdb|2EGA|A Chain A, Solution Structure Of The First Sh3 Domain From Human
Kiaa0418 Protein
Length = 70
Score = 30.4 bits (67), Expect = 2.4, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
V + +K E +LSL+ G +V++ + WW V G++P+ Y++ +
Sbjct: 12 VVVSNYKKQENSELSLQAGEVVDVIEKNESGWWFVSTSEEQ-GWVPATYLEAQ 63
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEE 472
S +W ++ E+ LG G+FG V + + S + +K E E E
Sbjct: 5 SKRQWALEDFEIG--RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 62
Query: 473 AKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
++ + L+H N+++LYG +Y++ +
Sbjct: 63 VEIQSHLRHPNILRLYGYFHDATRVYLILE 92
>pdb|2J6F|A Chain A, N-Terminal Sh3 Domain Of Cms (Cd2ap Human Homolog) Bound
To Cbl-B Peptide
pdb|2J6K|A Chain A, N-Terminal Sh3 Domain Of Cms (Cd2ap Human Homolog)
pdb|2J6K|B Chain B, N-Terminal Sh3 Domain Of Cms (Cd2ap Human Homolog)
pdb|2J6K|C Chain C, N-Terminal Sh3 Domain Of Cms (Cd2ap Human Homolog)
pdb|2J6K|D Chain D, N-Terminal Sh3 Domain Of Cms (Cd2ap Human Homolog)
pdb|2J6K|E Chain E, N-Terminal Sh3 Domain Of Cms (Cd2ap Human Homolog)
pdb|2J6K|F Chain F, N-Terminal Sh3 Domain Of Cms (Cd2ap Human Homolog)
pdb|2J6K|G Chain G, N-Terminal Sh3 Domain Of Cms (Cd2ap Human Homolog)
pdb|2J6K|H Chain H, N-Terminal Sh3 Domain Of Cms (Cd2ap Human Homolog)
pdb|2J6K|I Chain I, N-Terminal Sh3 Domain Of Cms (Cd2ap Human Homolog)
pdb|2J6K|J Chain J, N-Terminal Sh3 Domain Of Cms (Cd2ap Human Homolog)
pdb|2J6K|K Chain K, N-Terminal Sh3 Domain Of Cms (Cd2ap Human Homolog)
pdb|2J6K|L Chain L, N-Terminal Sh3 Domain Of Cms (Cd2ap Human Homolog)
pdb|2J6O|A Chain A, Atypical Polyproline Recognition By The Cms N-Terminal Sh3
Domain. Cms:cd2 Heterotrimer
pdb|2J7I|A Chain A, Atypical Polyproline Recognition By The Cms N-Terminal Sh3
Domain. Cms:cd2 Heterodimer
pdb|2J7I|B Chain B, Atypical Polyproline Recognition By The Cms N-Terminal Sh3
Domain. Cms:cd2 Heterodimer
Length = 62
Score = 30.4 bits (67), Expect = 2.6, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 132 YPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
Y + A+ +L++ G + QE W + NG G P N+VKE
Sbjct: 8 YDYDAVHDDELTIRVGEIIRNVKKLQEEGWLEGELNGRRGMFPDNFVKE 56
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Query: 419 LSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIE 471
L +W ++ E+ LG G+FG V + + S + +K E E
Sbjct: 3 LGSRQWALEDFEIG--RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
E ++ + L+H N+++LYG +Y++ +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILE 91
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 188 KYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQR 247
+ DD+ G L +++ K D+W+ GVL +E F GK P+ E R+ R
Sbjct: 165 RRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISR 223
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Query: 435 EELGSGQFGVVRRGKWRGS-IDVA---MMKEGT------MSEDDFIEEAKVMTRLQHQNL 484
EELGSG+F VV++ + + + + A + K T +S +D E ++ +QH N+
Sbjct: 17 EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 485 VQLYGVCSKHRPIYIVTD 502
+ L+ V + ++ +
Sbjct: 77 ITLHEVYENKTDVILILE 94
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ + L+H N+++LYG
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 81 YFHDATRVYLILE 93
>pdb|2VGE|A Chain A, Crystal Structure Of The C-Terminal Region Of Human Iaspp
Length = 229
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 122 MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVM--DDTQEHWWKVKDKNGSVGYIPSNY 177
++ V AL+ + A G +LS +G V+ D +E W +G GY+P NY
Sbjct: 151 LMNSGAVYALWDYSAEFGDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNY 208
>pdb|2A36|A Chain A, Solution Structure Of The N-Terminal Sh3 Domain Of Drk
pdb|2AZS|A Chain A, Nmr Structure Of The N-Terminal Sh3 Domain Of Drk
(Calculated Without Noe Restraints)
Length = 59
Score = 30.0 bits (66), Expect = 2.8, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
+A + F A +LS K ++++ + W + +G G IPSNY++ K
Sbjct: 4 IAKHDFSATADDELSFRKTQILKILNMEDDSNWYRAELDGKEGLIPSNYIEMK 56
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ + L+H N+++LYG
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 93 YFHDATRVYLILE 105
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ + L+H N+++LYG
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 102 YFHDATRVYLILE 114
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ + L+H N+++LYG
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 76 YFHDATRVYLILE 88
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ + L+H N+++LYG
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 102 YFHDATRVYLILE 114
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 188 KYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQR 247
+ DD+ G L +++ K D+W+ GVL +E F GK P+ E R+ R
Sbjct: 188 RRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISR 246
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ + L+H N+++LYG
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 78 YFHDATRVYLILE 90
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Query: 433 LLEELGSGQFGVVRRGKWRGS--------IDVAMMKEGTMSEDDFIEEAKVMTRLQHQNL 484
LL+ +G G F V+ + + ID + ++ + E ++M L H N+
Sbjct: 19 LLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQK--LFREVRIMKILNHPNI 76
Query: 485 VQLYGVCSKHRPIYIVTDTSS 505
V+L+ V + +Y++ + +S
Sbjct: 77 VKLFEVIETEKTLYLIMEYAS 97
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ + L+H N+++LYG
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 79 YFHDATRVYLILE 91
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ + L+H N+++LYG
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 79 YFHDATRVYLILE 91
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ + L+H N+++LYG
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 81 YFHDATRVYLILE 93
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPY 233
+V+N + +D W++GVLM+E+ T G +P+
Sbjct: 197 EVVNRRGHTQSADWWSFGVLMFEMLT-GTLPF 227
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 427 DPAELMLLEELGSGQFGVVRRGKWRGSID------VAMMKEGTMSEDDFIE---EAKVMT 477
DP++ LL+ LG G FG V K D + ++K+ T+ D + E ++
Sbjct: 23 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 82
Query: 478 RLQHQNLVQLYGVCSKHRPIYIVTD 502
+ H +V+L+ +Y++ D
Sbjct: 83 EVNHPFIVKLHYAFQTEGKLYLILD 107
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPY 233
+V+N + +D W++GVLM+E+ T G +P+
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFEMLT-GTLPF 226
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 427 DPAELMLLEELGSGQFGVVRRGKWRGSID------VAMMKEGTMSEDDFIE---EAKVMT 477
DP++ LL+ LG G FG V K D + ++K+ T+ D + E ++
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 81
Query: 478 RLQHQNLVQLYGVCSKHRPIYIVTD 502
+ H +V+L+ +Y++ D
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILD 106
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ + L+H N+++LYG
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 77 YFHDATRVYLILE 89
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ + L+H N+++LYG
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 78 YFHDATRVYLILE 90
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ + L+H N+++LYG
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 76 YFHDATRVYLILE 88
>pdb|1YWO|A Chain A, Phospholipase Cgamma1 Sh3 In Complex With A Slp-76 Motif
pdb|1YWP|A Chain A, Phospholipase Cgamma1 Sh3
Length = 64
Score = 30.0 bits (66), Expect = 3.2, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V AL+ +KA +L+ K A + ++ WW+ + PSNYV+E
Sbjct: 9 VKALFDYKAQREDELTFTKSAIIQNVEKQDGGWWRGDYGGKKQLWFPSNYVEE 61
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ + L+H N+++LYG
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 77 YFHDATRVYLILE 89
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ + L+H N+++LYG
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 77 YFHDATRVYLILE 89
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ + L+H N+++LYG
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 76 YFHDATRVYLILE 88
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ + L+H N+++LYG
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 75 YFHDATRVYLILE 87
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ + L+H N+++LYG
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 76 YFHDATRVYLILE 88
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ + L+H N+++LYG
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 79 YFHDATRVYLILE 91
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ + L+H N+++LYG
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 76 YFHDATRVYLILE 88
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ + L+H N+++LYG
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 76 YFHDATRVYLILE 88
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ + L+H N+++LYG
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 81 YFHDATRVYLILE 93
>pdb|2K3B|A Chain A, Seeing The Invisible: Structures Of Excited Protein States
By Relaxation Dispersion Nmr
Length = 62
Score = 30.0 bits (66), Expect = 3.3, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK-DKNGSVGYIPSNYV 178
A Y + A E +L+ + + ++ + WW + +K+GS G PSNYV
Sbjct: 9 AEYDYDAAEDNELTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYV 58
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ + L+H N+++LYG
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 79 YFHDATRVYLILE 91
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Query: 433 LLEELGSGQFGVVRRGKWRGS--------IDVAMMKEGTMSEDDFIEEAKVMTRLQHQNL 484
LL+ +G G F V+ + + ID + ++ + E ++M L H N+
Sbjct: 16 LLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQK--LFREVRIMKILNHPNI 73
Query: 485 VQLYGVCSKHRPIYIVTDTSS 505
V+L+ V + +Y++ + +S
Sbjct: 74 VKLFEVIETEKTLYLIMEYAS 94
>pdb|1Y0M|A Chain A, Crystal Structure Of Of The Sh3 Domain Of Phospholipase C
Gamma-1
Length = 61
Score = 30.0 bits (66), Expect = 3.3, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V AL+ +KA +L+ K A + ++ WW+ + PSNYV+E
Sbjct: 6 VKALFDYKAQREDELTFTKSAIIQNVEKQDGGWWRGDYGGKKQLWFPSNYVEE 58
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ + L+H N+++LYG
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 81 YFHDATRVYLILE 93
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPY 233
+V+N + +D W++GVLM+E+ T G +P+
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFEMLT-GTLPF 226
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 427 DPAELMLLEELGSGQFGVVRRGKWRGSID------VAMMKEGTMSEDDFIE---EAKVMT 477
DP++ LL+ LG G FG V K D + ++K+ T+ D + E ++
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 81
Query: 478 RLQHQNLVQLYGVCSKHRPIYIVTD 502
+ H +V+L+ +Y++ D
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILD 106
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ + L+H N+++LYG
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 81 YFHDATRVYLILE 93
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ + L+H N+++LYG
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 490 VCSKHRPIYIVTD 502
+Y++ +
Sbjct: 76 YFHDATRVYLILE 88
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/93 (21%), Positives = 41/93 (44%), Gaps = 9/93 (9%)
Query: 417 AGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDF 469
+ +W ++ E+ LG G+FG V + + S + +K E E
Sbjct: 1 GAMGSRQWALEDFEIG--RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 58
Query: 470 IEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
E ++ + L+H N+++LYG +Y++ +
Sbjct: 59 RREVEIQSHLRHPNILRLYGYFHDATRVYLILE 91
>pdb|2RPN|A Chain A, A Crucial Role For High Intrinsic Specificity In The
Function Of Yeast Sh3 Domains
Length = 59
Score = 30.0 bits (66), Expect = 3.6, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK-DKNGSVGYIPSNYV 178
A Y + A E +L+ + + ++ + WW + +K+GS G PSNYV
Sbjct: 6 AEYDYDAAEDNELTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYV 55
>pdb|1HSQ|A Chain A, Solution Structure Of The Sh3 Domain Of Phospholipase
Cgamma
pdb|2HSP|A Chain A, Solution Structure Of The Sh3 Domain Of Phospholipase
Cgamma
Length = 71
Score = 29.6 bits (65), Expect = 3.9, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V AL+ +KA +L+ K A + ++ + WW+ + PSNYV+E
Sbjct: 9 VKALFDYKAQREDELTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEE 61
>pdb|1JO8|A Chain A, Structural Analysis Of The Yeast Actin Binding Protein
Abp1 Sh3 Domain
Length = 58
Score = 29.6 bits (65), Expect = 3.9, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK-DKNGSVGYIPSNYV 178
A Y + A E +L+ + + ++ + WW + +K+GS G PSNYV
Sbjct: 5 AEYDYDAAEDNELTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYV 54
>pdb|1AB2|A Chain A, Three-Dimensional Solution Structure Of The Src Homology 2
Domain Of C-Abl
Length = 109
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 336 GCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHR 394
G F+VR S S+ G ++SL + V HY I S G+ ++S + +++ E+V++H
Sbjct: 31 GSFLVRESESSPGQRSISLRYE---GRVYHYRINTASDGKLYVSSESRFNTLAELVHHHS 87
Query: 395 HNSGGLASRL 404
+ GL + L
Sbjct: 88 TVADGLITTL 97
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 435 EELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRL-QHQNLVQLYGVCSK 493
E++G G + V +R + + +K S+ D EE +++ R QH N++ L V
Sbjct: 28 EDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDD 87
Query: 494 HRPIYIVTD 502
+ +Y+VT+
Sbjct: 88 GKYVYVVTE 96
>pdb|2DNU|A Chain A, Solution Structure Of Rsgi Ruh-061, A Sh3 Domain From
Human
Length = 71
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V + P+ + ++ EKG EV+ E WW ++ G G+ P++Y+K+
Sbjct: 12 VTVQPYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIR-YLGKEGWAPASYLKK 62
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 433 LLEELGSGQFGVVRRGKWRGSIDVAMMK------EGTMSEDDFIEEAKVMTRLQ-HQNLV 485
L+++LG G +G+V + R + +V +K + + E ++T L H+N+V
Sbjct: 13 LVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIV 72
Query: 486 QLYGV--CSKHRPIYIVTD 502
L V R +Y+V D
Sbjct: 73 NLLNVLRADNDRDVYLVFD 91
>pdb|2C9W|A Chain A, Crystal Structure Of Socs-2 In Complex With Elongin-B And
Elongin-C At 1.9a Resolution
Length = 169
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 49/120 (40%), Gaps = 22/120 (18%)
Query: 256 AWYVGDMSRQRAESILKQEDKEGCFVVRNSS-TKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
WY G M+ A+ LK E EG F++R+SS + L T+S+ T +++ +
Sbjct: 18 GWYWGSMTVNEAKEKLK-EAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLR----IEYQD 72
Query: 315 GEFFLSEKHCCHS---------------IPEVKDKE-GCFVVRNSSTKGLYTLSLYTKVP 358
G+F L C S + KDK G RN + T LYT P
Sbjct: 73 GKFRLDSIICVKSKLKQFDSVVHLIDYYVQMCKDKRTGPEAPRNGTVHLYLTKPLYTSAP 132
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 165 DKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWE 224
DK+G + KE +LG K ++ G + ++L +++ D W++GVL++E
Sbjct: 153 DKDGHIKIADFGMCKEN-MLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYE 211
Query: 225 VFTCGKMPY 233
+ G+ P+
Sbjct: 212 MLI-GQSPF 219
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
LG G+FG V + + S + +K E E E ++ L H N+++LY
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 490 VCSKHRPIYIVTD 502
R IY++ +
Sbjct: 91 YFYDRRRIYLILE 103
>pdb|3IQL|A Chain A, Crystal Structure Of The Rat Endophilin-A1 Sh3 Domain
pdb|3IQL|B Chain B, Crystal Structure Of The Rat Endophilin-A1 Sh3 Domain
pdb|2KNB|B Chain B, Solution Nmr Structure Of The Parkin Ubl Domain In Complex
With The Endophilin-A1 Sh3 Domain
Length = 71
Score = 29.3 bits (64), Expect = 5.3, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
ALY F+ G+L ++G + + E+W++ +G G+ P NYV+
Sbjct: 16 ALYDFEPENEGELGFKEGDIITLTNQIDENWYEGM-LHGQSGFFPINYVE 64
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 168 GSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFT 227
G GY+ + K+ + G + Y + E I+ LN +S KSD+W+ G+ M E+
Sbjct: 155 GISGYLVDDVAKDIDA-GCKPY-----MAPERINPELNQKGYSVKSDIWSLGITMIELAI 208
Query: 228 CGKMPY 233
+ PY
Sbjct: 209 L-RFPY 213
>pdb|2CUC|A Chain A, Solution Structure Of The Sh3 Domain Of The Mouse
Hypothetical Protein Sh3rf2
Length = 70
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK-VKDKNGSVGYIPSNYV 178
+ VAL+ + A +L L+KG V+ Q+ W K + G G PS+YV
Sbjct: 8 NMFVALHTYSAHRPEELDLQKGEGIRVLGKYQDGWLKGLSLLTGRTGIFPSDYV 61
>pdb|3M7F|A Chain A, Crystal Structure Of The Nedd4 C2GRB10 SH2 COMPLEX
Length = 108
Score = 29.3 bits (64), Expect = 5.8, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 251 LEKPKAWYVGDMSRQRAESILKQED-KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYH 308
+ + + W+ G +SR+ + I+KQ+ +G F++R+S S + L+L H +K++
Sbjct: 1 IHRTQHWFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTL---CHHQKIKNFQ 57
Query: 309 I 309
I
Sbjct: 58 I 58
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 469 FIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
E ++M L H N+V+L+ V + +Y+V + +S
Sbjct: 61 LFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYAS 97
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPY 233
+++ Y + D WAYGVL++E+ G+ P+
Sbjct: 190 EIIAYQPYGKSVDWWAYGVLLYEMLA-GQPPF 220
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Query: 435 EELGSGQFGVVRRGKWRGS-IDVA---MMKEGT------MSEDDFIEEAKVMTRLQHQNL 484
EELGSG F VV++ + + + + A + K T +S +D E ++ +QH N+
Sbjct: 17 EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 485 VQLYGVCSKHRPIYIVTD 502
+ L+ V + ++ +
Sbjct: 77 ITLHEVYENKTDVILILE 94
>pdb|1NRV|A Chain A, Crystal Structure Of The Sh2 Domain Of Grb10
pdb|1NRV|B Chain B, Crystal Structure Of The Sh2 Domain Of Grb10
Length = 105
Score = 28.9 bits (63), Expect = 6.8, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 251 LEKPKAWYVGDMSRQRAESILKQED-KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYH 308
+ + + W+ G +SR+ + I+KQ+ +G F++R+S S + L+L H +K++
Sbjct: 1 IHRTQHWFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTL---CHHQKIKNFQ 57
Query: 309 I 309
I
Sbjct: 58 I 58
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 198 ELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPY 233
E I+ LN +S KSD+W+ G+ M E+ + PY
Sbjct: 223 ERINPELNQKGYSVKSDIWSLGITMIELAIL-RFPY 257
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 437 LGSGQFGVVRRGKWRGS---IDVAMMKEGTMSEDD---FIEEAKVMTRLQHQNLVQLYGV 490
LG G FG V + K R + V ++ + + D + E +++ +L H N+++L+ +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 491 CSKHRPIYIV 500
YIV
Sbjct: 90 LEDSSSFYIV 99
>pdb|2DBM|A Chain A, Solution Structures Of The Sh3 Domain Of Human Sh3-
Containing Grb2-Like Protein 2
Length = 73
Score = 28.9 bits (63), Expect = 6.9, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
ALY F+ G+L ++G + + E+W++ +G G+ P NYV+
Sbjct: 12 ALYDFEPENEGELGFKEGDIITLTNQIDENWYEGM-LHGHSGFFPINYVE 60
>pdb|2DL8|A Chain A, Solution Structure Of The Sh3 Domain Of Human Slit-Robo
Rho Gtpase-Activating Protein 2
Length = 72
Score = 28.9 bits (63), Expect = 6.9, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
P +A + + +LS +KGA + + WW+ + NG G IP Y+
Sbjct: 9 PIEAIAKFDYVGRTARELSFKKGASLLLYQRASDDWWEGR-HNGIDGLIPHQYI 61
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 11/90 (12%)
Query: 404 LKTSPCDRP-----VPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM 458
+K +P D P V A+ G + ++ EI ++ G+G FGVV + K S +VA+
Sbjct: 13 VKLNPLDDPNKVIKVLASDGKTGEQREIAYTNCKVI---GNGSFGVVFQAKLVESDEVAI 69
Query: 459 MKEGTMSEDDFIE-EAKVMTRLQHQNLVQL 487
K + + F E ++M ++H N+V L
Sbjct: 70 KK--VLQDKRFKNRELQIMRIVKHPNVVDL 97
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 430 ELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTR--LQHQNLV 485
++ L+E +G G++G V RG W G VA+ + E + E ++ L+H N++
Sbjct: 9 QVALVECVGKGRYGEVWRGLWHGE-SVAVKIFSSRDEQSWFRETEIYNTVLLRHDNIL 65
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 437 LGSGQFGVVRRGKWRGS---IDVAMMKEGTMSEDD---FIEEAKVMTRLQHQNLVQLYGV 490
LG G FG V + K R + V ++ + + D + E +++ +L H N+++L+ +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 491 CSKHRPIYIV 500
YIV
Sbjct: 90 LEDSSSFYIV 99
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
+E +GSG FG V + K R ++K + + E K + +L H N+V G
Sbjct: 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNG 71
>pdb|2FEI|A Chain A, Solution Structure Of The Second Sh3 Domain Of Human Cms
Protein
Length = 65
Score = 28.9 bits (63), Expect = 7.6, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 141 DLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
+L L+ G ++ ++ +E WW N +G PSN+VK
Sbjct: 17 ELELKVGDIIDINEEVEEGWWS-GTLNNKLGLFPSNFVK 54
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 28.9 bits (63), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 415 ATAGLSHDKWEIDPAELMLLEELGSGQFGVV-----RRGKWRGSIDV----AMMKEGTMS 465
A A + K+ ID + + LG G+FG V ++ K+ ++ V + KEG
Sbjct: 3 ALAEMPKRKFTID--DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV-- 58
Query: 466 EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTS 504
E E ++ + L+H N++++Y + IY++ + +
Sbjct: 59 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFA 97
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 415 ATAGLSHDKWEIDPAELMLLEELGSGQFGVV-----RRGKWRGSIDV----AMMKEGTMS 465
A A + K+ ID + + LG G+FG V ++ K+ ++ V + KEG
Sbjct: 2 ALAEMPKRKFTID--DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV-- 57
Query: 466 EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTS 504
E E ++ + L+H N++++Y + IY++ + +
Sbjct: 58 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFA 96
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 437 LGSGQFGVVRRGKWRGSID---VAMMKEGTMSEDD---FIEEAKVMTRLQHQNLVQLYGV 490
LG G FG V + K R + V ++ + + D + E +++ +L H N+++L+ +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 491 CSKHRPIYIV 500
YIV
Sbjct: 90 LEDSSSFYIV 99
>pdb|2BS2|B Chain B, Quinol:fumarate Reductase From Wolinella Succinogenes
pdb|2BS2|E Chain E, Quinol:fumarate Reductase From Wolinella Succinogenes
Length = 241
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 75 VVALYPFKAIE-GGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYP 133
V+ L P A + DLS++ G + M E W + ++ I K ++ I P+V ++
Sbjct: 88 VITLLPLPAFKLIKDLSVDTGNWFNGMSQRVESWIHAQKEHDISKLEERIEPEVAQEVFE 147
Query: 134 F-KAIEGG 140
+ IE G
Sbjct: 148 LDRCIECG 155
>pdb|1VC8|A Chain A, Crystal Structure Of A T.Thermophilus Hb8 Ap6a Hydrolase
Ndx1-Ap6a Complex
pdb|1VC8|B Chain B, Crystal Structure Of A T.Thermophilus Hb8 Ap6a Hydrolase
Ndx1-Ap6a Complex
pdb|1VCD|A Chain A, Crystal Structure Of A T.Thermophilus Hb8 Ap6a Hydrolase
Ndx1
pdb|1VCD|B Chain B, Crystal Structure Of A T.Thermophilus Hb8 Ap6a Hydrolase
Ndx1
Length = 126
Score = 28.9 bits (63), Expect = 8.0, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 16/78 (20%)
Query: 45 HRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQ 104
H E +SL +++ E+ W + +R +V++ LYP + + KG E EV
Sbjct: 32 HPEPGESLEEAAVREV----WEETGVRAEVLLPLYPTRYVN------PKGVEREV----- 76
Query: 105 EHWWKVKDKNGIRKPDQM 122
HW+ ++ + R + M
Sbjct: 77 -HWFLMRGEGAPRLEEGM 93
>pdb|1QLB|B Chain B, Respiratory Complex Ii-Like Fumarate Reductase From
Wolinella Succinogenes
pdb|1QLB|E Chain E, Respiratory Complex Ii-Like Fumarate Reductase From
Wolinella Succinogenes
pdb|1E7P|B Chain B, Quinol:fumarate Reductase From Wolinella Succinogenes
pdb|1E7P|E Chain E, Quinol:fumarate Reductase From Wolinella Succinogenes
pdb|1E7P|H Chain H, Quinol:fumarate Reductase From Wolinella Succinogenes
pdb|1E7P|K Chain K, Quinol:fumarate Reductase From Wolinella Succinogenes
pdb|2BS3|B Chain B, Glu C180-> Gln Variant Quinol:fumarate Reductase From
Wolinella Succinogenes
pdb|2BS3|E Chain E, Glu C180-> Gln Variant Quinol:fumarate Reductase From
Wolinella Succinogenes
pdb|2BS4|B Chain B, Glu C180-> Ile Variant Quinol:fumarate Reductase From
Wolinella Succinogenes
pdb|2BS4|E Chain E, Glu C180-> Ile Variant Quinol:fumarate Reductase From
Wolinella Succinogenes
Length = 239
Score = 28.5 bits (62), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 75 VVALYPFKAIE-GGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYP 133
V+ L P A + DLS++ G + M E W + ++ I K ++ I P+V ++
Sbjct: 88 VITLLPLPAFKLIKDLSVDTGNWFNGMSQRVESWIHAQKEHDISKLEERIEPEVAQEVFE 147
Query: 134 F-KAIEGG 140
+ IE G
Sbjct: 148 LDRCIECG 155
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAM--MKEGTMS--EDDFIEEAKVMTRLQHQNLVQLYGVC 491
LG G FG V +G+ VA+ +KE E F E ++++ H+NL++L G C
Sbjct: 46 LGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFC 104
>pdb|2XMF|A Chain A, Myosin 1e Sh3
Length = 60
Score = 28.5 bits (62), Expect = 8.7, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
ALY + A + +LS +++ + WW + + G G P+NYV +
Sbjct: 10 ALYAYDAQDTDELSFNANDIIDIIKEDPSGWWTGRLR-GKQGLFPNNYVTK 59
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 436 ELGSGQFGVVRRG-KWRGSIDVA----MMKEGTMSEDD-FIEEAKVMTRLQHQNLVQLY 488
E+G G F V +G +++VA ++ T SE F EEA+ + LQH N+V+ Y
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFY 91
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 28.5 bits (62), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 432 MLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFI---EEAKVMTRLQHQNLVQLY 488
M+ E+LG G+FG+V R S M K + D + +E ++ +H+N++ L+
Sbjct: 8 MIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLH 67
>pdb|3C0C|A Chain A, X-Ray Crystal Structure Of The Rat Endophilin A2 Sh3
Domain
Length = 73
Score = 28.5 bits (62), Expect = 9.6, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
ALY F+ G+L +G + + E+W++ +G G+ P +YV+
Sbjct: 18 ALYDFEPENDGELGFREGDLITLTNQIDENWYE-GXLHGQSGFFPLSYVQ 66
>pdb|2D1X|A Chain A, The Crystal Structure Of The Cortactin-Sh3 Domain And
Amap1- Peptide Complex
pdb|2D1X|B Chain B, The Crystal Structure Of The Cortactin-Sh3 Domain And
Amap1- Peptide Complex
pdb|2D1X|C Chain C, The Crystal Structure Of The Cortactin-Sh3 Domain And
Amap1- Peptide Complex
pdb|2D1X|D Chain D, The Crystal Structure Of The Cortactin-Sh3 Domain And
Amap1- Peptide Complex
Length = 66
Score = 28.5 bits (62), Expect = 9.6, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Query: 129 VALYPFKAIEGGDLSLEKG---AEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
VALY ++A ++S + E++DD WW+ K G G P+NYV+ ++
Sbjct: 14 VALYDYQAAGDDEISFDPDDIITNIEMIDDG---WWRGVCK-GRYGLFPANYVELRQ 66
>pdb|3AMJ|B Chain B, The Crystal Structure Of The Heterodimer Of M16b Peptidase
From Sphingomonas Sp. A1
pdb|3AMJ|D Chain D, The Crystal Structure Of The Heterodimer Of M16b Peptidase
From Sphingomonas Sp. A1
Length = 424
Score = 28.5 bits (62), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 12/67 (17%)
Query: 219 GVLMWEVFT---CGKMPYGRLKNTEVVDRVQRGIILEKPKAWY---------VGDMSRQR 266
G ++ FT GK PYG + + + ++ R ++ + Y VGD++R
Sbjct: 143 GSILGRRFTELAYGKHPYGHVSSVATLQKISRDQLVSFHRTHYVARTAVVTLVGDITRAE 202
Query: 267 AESILKQ 273
AE+I +Q
Sbjct: 203 AETIAQQ 209
>pdb|3EAZ|A Chain A, Crystal Structure Of Sh2 Domain Of Human Csk (Carboxyl-
Terminal Src Kinase), C122s Mutant
Length = 106
Score = 28.5 bits (62), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHI 309
W+ G ++R++AE +L + G F+VR S+ G YTL + + V+HY I
Sbjct: 10 WFHGKITREQAERLLYPPET-GLFLVRESTNYPGDYTLCVSSD---GKVEHYRI 59
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,438,546
Number of Sequences: 62578
Number of extensions: 738944
Number of successful extensions: 4632
Number of sequences better than 100.0: 914
Number of HSP's better than 100.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 292
Number of HSP's that attempted gapping in prelim test: 2379
Number of HSP's gapped (non-prelim): 2094
length of query: 513
length of database: 14,973,337
effective HSP length: 103
effective length of query: 410
effective length of database: 8,527,803
effective search space: 3496399230
effective search space used: 3496399230
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)