RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy17476
(513 letters)
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 218 bits (558), Expect = 5e-65
Identities = 85/250 (34%), Positives = 134/250 (53%), Gaps = 17/250 (6%)
Query: 260 GDMSRQRAE--SILKQEDKEGCFVVRNSSTKGLYTLSLY-TKVPHPHVKHYHIKQNSRGE 316
D+S ++ E I+ + + S+ + Y S Y + ++ + +R E
Sbjct: 100 TDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDSIQAEEWYFGKITRRE 159
Query: 317 FFLSEKHCCHSIPEVKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRG 373
SE+ ++ ++ G F+VR S +TKG Y LS+ + +VKHY I++ G
Sbjct: 160 ---SERLLLNA----ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSG 212
Query: 374 EFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELML 433
F+++ + +S+ ++V Y+ ++ GL RL T+ C P T GL+ D WEI L L
Sbjct: 213 GFYITSRTQFNSLQQLVAYYSKHADGLCHRL-TTVCPTSKPQTQGLAKDAWEIPRESLRL 271
Query: 434 LEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVC 491
+LG G FG V G W G+ VA +K GTMS + F++EA+VM +L+H+ LVQLY V
Sbjct: 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 492 SKHRPIYIVT 501
S+ PIYIVT
Sbjct: 332 SE-EPIYIVT 340
Score = 83.8 bits (207), Expect = 2e-17
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
+ Y RF+ KSDVW++G+L+ E+ T G++PY + N EV+D+V+RG + P
Sbjct: 434 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 487
Score = 73.8 bits (181), Expect = 4e-14
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKEKEL 183
VALY +++ DLS +KG +++++T+ WW G GYIPSNYV +
Sbjct: 85 VTTFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDS 144
Query: 184 LGLQKYD 190
+ +++
Sbjct: 145 IQAEEWY 151
Score = 73.0 bits (179), Expect = 7e-14
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
M GSLL++L+ + L+DM Q+ GMAY+ER NY+HR
Sbjct: 343 MSKGSLLDFLKGETGKYL-RLPQLVDMAAQIASGMAYVERMNYVHR 387
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 212 bits (541), Expect = 2e-63
Identities = 85/250 (34%), Positives = 133/250 (53%), Gaps = 17/250 (6%)
Query: 260 GDMSRQRAE--SILKQEDKEGCFVVRNSSTKGLYTLSLY-TKVPHPHVKHYHIKQNSRGE 316
D+S ++ E I+ + + S+ + Y S Y + ++ + +R E
Sbjct: 17 TDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDSIQAEEWYFGKITRRE 76
Query: 317 FFLSEKHCCHSIPEVKDKEGCFVVRNS-STKGLYTLSLYTK--VPHPHVKHYHIKQNSRG 373
SE+ ++ ++ G F+VR S +TKG Y LS+ +VKHY I++ G
Sbjct: 77 ---SERLLLNA----ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSG 129
Query: 374 EFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELML 433
F+++ + +S+ ++V Y+ ++ GL RL T+ C P T GL+ D WEI L L
Sbjct: 130 GFYITSRTQFNSLQQLVAYYSKHADGLCHRL-TTVCPTSKPQTQGLAKDAWEIPRESLRL 188
Query: 434 LEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVC 491
+LG G FG V G W G+ VA +K GTMS + F++EA+VM +L+H+ LVQLY V
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 492 SKHRPIYIVT 501
S+ PIYIVT
Sbjct: 249 SEE-PIYIVT 257
Score = 82.9 bits (205), Expect = 3e-17
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
+ Y RF+ KSDVW++G+L+ E+ T G++PY + N EV+D+V+RG + P
Sbjct: 351 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 404
Score = 72.1 bits (177), Expect = 1e-13
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
M GSLL++L+ + L+DM Q+ GMAY+ER NY+HR
Sbjct: 260 MSKGSLLDFLKGETGKYL-RLPQLVDMAAQIASGMAYVERMNYVHR 304
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 211 bits (539), Expect = 1e-62
Identities = 61/175 (34%), Positives = 101/175 (57%), Gaps = 11/175 (6%)
Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
G F+VR S S+ G ++SL + V HY I S G+ ++S + +++ E+V++
Sbjct: 125 INGSFLVRESESSPGQRSISLRYEG---RVYHYRINTASDGKLYVSSESRFNTLAELVHH 181
Query: 393 HRHNSGGLASRLKTSPC---DRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGK 449
H + GL + L P ++P ++DKWE++ ++ + +LG GQ+G V G
Sbjct: 182 HSTVADGLITTL-HYPAPKRNKPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGV 240
Query: 450 WRG-SIDVA--MMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
W+ S+ VA +KE TM ++F++EA VM ++H NLVQL GVC++ P YI+T
Sbjct: 241 WKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295
Score = 85.6 bits (212), Expect = 6e-18
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKEL 183
P + VALY F A LS+ KG + V+ W G++PSNY+
Sbjct: 42 DPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVN- 100
Query: 184 LGLQKYD 190
L+K+
Sbjct: 101 -SLEKHS 106
Score = 84.1 bits (208), Expect = 2e-17
Identities = 22/54 (40%), Positives = 37/54 (68%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
+ L Y +FS KSDVWA+GVL+WE+ T G PY + ++V + +++ +E+P+
Sbjct: 389 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE 442
Score = 72.1 bits (177), Expect = 1e-13
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
M +G+LL+YLR + +LL M Q+ M YLE+ N+IHR
Sbjct: 298 MTYGNLLDYLRECNRQEV-SAVVLLYMATQISSAMEYLEKKNFIHR 342
Score = 59.4 bits (144), Expect = 1e-09
Identities = 13/45 (28%), Positives = 17/45 (37%)
Query: 71 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
P + VALY F A LS+ KG + V+ W
Sbjct: 42 DPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKN 86
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 203 bits (519), Expect = 4e-60
Identities = 65/174 (37%), Positives = 97/174 (55%), Gaps = 8/174 (4%)
Query: 333 DKEGCFVVRNS-STKGLYTLSLYTKVP--HPHVKHYHIKQNSRGEFFLSEKHCCHSIPEV 389
+ G F++R+S +TKG Y+LS+ P VKHY I+ G F++S + ++ E+
Sbjct: 91 NMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQEL 150
Query: 390 VNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGK 449
V++++ + GL +L + PC P D WEI L L ++LG+GQFG V
Sbjct: 151 VDHYKKGNDGLCQKL-SVPCMSSKPQKPW-EKDAWEIPRESLKLEKKLGAGQFGEVWMAT 208
Query: 450 WRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
+ VA MK G+MS + F+ EA VM LQH LV+L+ V +K PIYI+T
Sbjct: 209 YNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE-PIYIIT 261
Score = 89.0 bits (221), Expect = 3e-19
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+N+ F+ KSDVW++G+L+ E+ T G++PY + N EV+ ++RG + +P
Sbjct: 356 AINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRP 407
Score = 75.1 bits (185), Expect = 1e-14
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKEKELL 184
+VVALY ++AI DLS +KG + V++++ WWK + GYIPSNYV +
Sbjct: 9 IIVVALYDYEAIHHEDLSFQKGDQMVVLEES-GEWWKARSLATRKEGYIPSNYVARVD-- 65
Query: 185 GLQKYD 190
L+ +
Sbjct: 66 SLETEE 71
Score = 71.3 bits (175), Expect = 2e-13
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
M GSLL++L+ E + + L+D Q+ +GMA++E+ NYIHR
Sbjct: 264 MAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNYIHR 308
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 201 bits (513), Expect = 5e-60
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 17/173 (9%)
Query: 334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYH 393
G F+VR S K Y LS+ +H+ I+ + E SIP ++++
Sbjct: 31 HSGDFLVRESQGKQEYVLSVLWD---GLPRHFIIQSL--DNLYRLEGEGFPSIPLLIDHL 85
Query: 394 RHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG- 452
L + R VP DKW ++ +L+L E++G G FG V G+ R
Sbjct: 86 LSTQQPLTKKSG-VVLHRAVP------KDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRAD 138
Query: 453 SIDVA--MMKEGTMSED--DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
+ VA +E + F++EA+++ + H N+V+L GVC++ +PIYIV
Sbjct: 139 NTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191
Score = 91.2 bits (227), Expect = 4e-20
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
LNY R+SS+SDVW++G+L+WE F+ G PY L N + + V++G L P+
Sbjct: 286 ALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPE 338
Score = 73.4 bits (181), Expect = 2e-14
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
++ G L +LR L V LL M GM YLE IHR
Sbjct: 194 VQGGDFLTFLRTEGARL--RVKTLLQMVGDAAAGMEYLESKCCIHR 237
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 196 bits (500), Expect = 3e-57
Identities = 57/173 (32%), Positives = 94/173 (54%), Gaps = 11/173 (6%)
Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
+ G F+VR S + G YTL + + V+HY I ++ + + E+ ++ ++V +
Sbjct: 100 ETGLFLVRESTNYPGDYTLCVSCEG---KVEHYRIMYHA-SKLSIDEEVYFENLMQLVEH 155
Query: 393 HRHNSGGLASRL-KTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWR 451
+ ++ GL +RL K + V A W ++ EL LL+ +G G+FG V G +R
Sbjct: 156 YTTDADGLCTRLIKPKVMEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYR 215
Query: 452 GSIDVA--MMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRP-IYIVT 501
G+ VA +K ++ F+ EA VMT+L+H NLVQL GV + + +YIVT
Sbjct: 216 GN-KVAVKCIKNDATAQ-AFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266
Score = 88.2 bits (219), Expect = 6e-19
Identities = 22/53 (41%), Positives = 39/53 (73%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L +FS+KSDVW++G+L+WE+++ G++PY R+ +VV RV++G ++ P
Sbjct: 357 ALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPD 409
Score = 79.7 bits (197), Expect = 3e-16
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQE-HWWKVKDKNGSVGYIPSNYVKEKE 182
+A Y F DL KG ++ T++ +W+K K+K G G IP+NYV+++E
Sbjct: 12 TECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKRE 69
Score = 71.2 bits (175), Expect = 2e-13
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
M GSL++YLR ++ LL + VC+ M YLE +N++HR
Sbjct: 269 MAKGSLVDYLRSRGRSVL-GGDCLLKFSLDVCEAMEYLEGNNFVHR 313
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 177 bits (450), Expect = 5e-49
Identities = 63/331 (19%), Positives = 116/331 (35%), Gaps = 30/331 (9%)
Query: 193 NGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILE 252
+GL L + + V+ + + E Q + +
Sbjct: 92 DGLPCNLRKPCNRPSGLEPQPGVFDCLRDAMVRDYVRQTWKLEGEALEQAIISQAPQVEK 151
Query: 253 KPKA-------WYVGDMSRQRAESILKQ-EDKEGCFVVRNSSTKGLYTLSLYTKVPHPHV 304
WY ++R+ AE L +G F++R +G Y LSL V
Sbjct: 152 LIATTAHERMPWYHSSLTREEAERKLYSGAQTDGKFLLRPRKEQGTYALSLIYG---KTV 208
Query: 305 KHYHIKQNSRGEFFLSEKHCCHSIPEV------KDKEGCFVVRNSSTKGLYTLSLYTKVP 358
HY I Q+ G++ + E ++ ++ K + ++ + + + P
Sbjct: 209 YHYLISQDKAGKYCIPEGTKFDTLWQLVEYLKLKADGLIYCLKEACPNSSASNASGAAAP 268
Query: 359 HPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATAG 418
+ R + + TS + P
Sbjct: 269 TLPAHPSTLTHPQRR----IDTLNSDGYTPEPARITSPDKPRPMPMDTSVFESPFSDPEE 324
Query: 419 LSHDKWEIDPAELMLLE-ELGSGQFGVVRRGKWR---GSIDVA--MMKEGT--MSEDDFI 470
L K + L++ + ELG G FG VR+G +R IDVA ++K+GT ++ +
Sbjct: 325 LKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMM 384
Query: 471 EEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
EA++M +L + +V+L GVC + +V
Sbjct: 385 REAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414
Score = 87.7 bits (217), Expect = 2e-18
Identities = 23/51 (45%), Positives = 37/51 (72%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+N+ +FSS+SDVW+YGV MWE + G+ PY ++K EV+ +++G +E P
Sbjct: 511 INFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP 561
Score = 85.4 bits (211), Expect = 8e-18
Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Query: 257 WYVGDMSRQRAESILKQ-EDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
++ G +SR AE LK +G F++R + G Y LSL H+ I++
Sbjct: 10 FFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVH---DVRFHHFPIERQLN 66
Query: 315 GEFFLSEKHCCHSIPE 330
G + ++ E
Sbjct: 67 GTYAIAGGKAHCGPAE 82
Score = 83.8 bits (207), Expect = 3e-17
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Query: 333 DKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVN 391
+G F++R + G Y LSL H+ I++ G + ++ E+
Sbjct: 29 MADGLFLLRQCLRSLGGYVLSLVH---DVRFHHFPIERQLNGTYAIAGGKAHCGPAELCE 85
Query: 392 YHRHNSGGLASRLKTSPCDRP 412
++ + GL L PC+RP
Sbjct: 86 FYSRDPDGLPCNL-RKPCNRP 105
Score = 71.9 bits (176), Expect = 2e-13
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
G L +L + V + ++ QV GM YLE N++HR
Sbjct: 417 AGGGPLHKFLVGKREEI--PVSNVAELLHQVSMGMKYLEEKNFVHR 460
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 156 bits (397), Expect = 3e-44
Identities = 62/97 (63%), Positives = 76/97 (78%), Gaps = 3/97 (3%)
Query: 408 PC-DRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTM 464
P + P+TAGL + WEIDP +L L+ELG+GQFGVV+ GKWRG DVA M+KEG+M
Sbjct: 2 PLGSKNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM 61
Query: 465 SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
SED+FIEEAKVM L H+ LVQLYGVC+K RPI+I+T
Sbjct: 62 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT 98
Score = 92.7 bits (231), Expect = 4e-21
Identities = 28/53 (52%), Positives = 41/53 (77%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
VL Y++FSSKSD+WA+GVLMWE+++ GKMPY R N+E + + +G+ L +P
Sbjct: 192 VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPH 244
Score = 76.5 bits (189), Expect = 1e-15
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
M +G LLNYLR + LL+MC VC+ M YLE ++HR
Sbjct: 101 MANGCLLNYLREMRHRF--QTQQLLEMCKDVCEAMEYLESKQFLHR 144
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET: 07J;
2.80A {Homo sapiens}
Length = 382
Score = 147 bits (373), Expect = 7e-40
Identities = 33/154 (21%), Positives = 64/154 (41%), Gaps = 14/154 (9%)
Query: 362 VKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSH 421
+ +YH + + +E + + ++H H+ + + L
Sbjct: 1 MGYYHHHHHHDYDIPTTENLYFNGMGYYHHHHHHDYDIPTTENLYFQGMLAGVSEYELPE 60
Query: 422 -DKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVA--MMKEGTMSED--D 468
+WE+ L+L + LG G FG V + G VA M+K +D D
Sbjct: 61 DPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD 120
Query: 469 FIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVT 501
I E ++M + +H+N++ L G C++ P+Y++
Sbjct: 121 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 154
Score = 82.4 bits (204), Expect = 3e-17
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L ++ +SDVW++GVL+WE+FT G PY + E+ ++ G ++KP
Sbjct: 265 LFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 316
Score = 61.6 bits (150), Expect = 2e-10
Identities = 14/59 (23%), Positives = 18/59 (30%), Gaps = 13/59 (22%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------------LLDMCIQVCKGMAYLERHNYIHR 46
G+L YL+ L+ QV +GM YL IHR
Sbjct: 157 ASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR 215
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 142 bits (361), Expect = 9e-39
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 390 VNYHRHNSGGLAS----------RLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGS 439
+++H H+S G + + P P AG S EI+ + + + + +GS
Sbjct: 1 MHHHHHHSSGRENLYFQGKLPEPQFYAEPHTYEEPGRAGRS-FTREIEASRIHIEKIIGS 59
Query: 440 GQFGVVRRGKWR----GSIDVA--MMKEGTMSED--DFIEEAKVMTRLQHQNLVQLYGVC 491
G G V G+ R + VA +K G DF+ EA +M + H N+++L GV
Sbjct: 60 GDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV 119
Query: 492 SKHRPIYIVT 501
++ R IVT
Sbjct: 120 TRGRLAMIVT 129
Score = 90.8 bits (226), Expect = 3e-20
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + FSS SDVW++GV+MWEV G+ PY + N +V+ V+ G L P
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAP 276
Score = 75.8 bits (187), Expect = 3e-15
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
M +GSL +LR H+ + L+ M V GM YL Y+HR
Sbjct: 132 MENGSLDTFLRTHDGQF--TIMQLVGMLRGVGAGMRYLSDLGYVHR 175
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 139 bits (352), Expect = 5e-38
Identities = 49/81 (60%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQ 480
E+ E+ LL+ELGSGQFGVV+ GKW+G DVA M+KEG+MSED+F +EA+ M +L
Sbjct: 2 HMELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLS 61
Query: 481 HQNLVQLYGVCSKHRPIYIVT 501
H LV+ YGVCSK PIYIVT
Sbjct: 62 HPKLVKFYGVCSKEYPIYIVT 82
Score = 91.9 bits (229), Expect = 4e-21
Identities = 30/53 (56%), Positives = 40/53 (75%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
V +Y ++SSKSDVWA+G+LMWEVF+ GKMPY N+EVV +V +G L +P
Sbjct: 176 VFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPH 228
Score = 75.7 bits (187), Expect = 2e-15
Identities = 24/46 (52%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
+ +G LLNYLR H L LL+MC VC+GMA+LE H +IHR
Sbjct: 85 ISNGCLLNYLRSHGKGL--EPSQLLEMCYDVCEGMAFLESHQFIHR 128
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 139 bits (352), Expect = 6e-38
Identities = 46/81 (56%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQ 480
KW IDP+EL ++E+GSGQFG+V G W VA ++EG MSE+DFIEEA+VM +L
Sbjct: 2 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS 61
Query: 481 HQNLVQLYGVCSKHRPIYIVT 501
H LVQLYGVC + PI +VT
Sbjct: 62 HPKLVQLYGVCLEQAPICLVT 82
Score = 92.3 bits (230), Expect = 3e-21
Identities = 29/53 (54%), Positives = 41/53 (77%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
V +++R+SSKSDVW++GVLMWEVF+ GK+PY N+EVV+ + G L KP+
Sbjct: 176 VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 228
Score = 76.5 bits (189), Expect = 9e-16
Identities = 22/46 (47%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
M HG L +YLR LL MC+ VC+GMAYLE IHR
Sbjct: 85 MEHGCLSDYLRTQRGLF--AAETLLGMCLDVCEGMAYLEEACVIHR 128
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 138 bits (351), Expect = 1e-37
Identities = 37/85 (43%), Positives = 58/85 (68%), Gaps = 3/85 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG-SIDVA--MMKEGTMSEDDFIEEAKVM 476
++DKWE++ ++ + +LG GQ+G V G W+ S+ VA +KE TM ++F++EA VM
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
++H NLVQL GVC++ P YI+T
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIT 88
Score = 91.5 bits (228), Expect = 8e-21
Identities = 22/53 (41%), Positives = 36/53 (67%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L Y +FS KSDVWA+GVL+WE+ T G PY + ++V + +++ +E+P+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE 235
Score = 72.3 bits (178), Expect = 3e-14
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
M +G+LL+YLR + +LL M Q+ M YLE+ N+IHR
Sbjct: 91 MTYGNLLDYLRECNRQEV-SAVVLLYMATQISSAMEYLEKKNFIHR 135
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 138 bits (351), Expect = 3e-37
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 12/125 (9%)
Query: 388 EVVNYHRHNSGGLASRLKT--SPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVV 445
++H H+ + + P A L EI P+ + + +G+G+FG V
Sbjct: 2 SYYHHHHHHDYDIPTTENLYFQGAMGSDPNQAVLK-FTTEIHPSCVTRQKVIGAGEFGEV 60
Query: 446 RRGKWRGS-----IDVA--MMKEGTMSED--DFIEEAKVMTRLQHQNLVQLYGVCSKHRP 496
+G + S + VA +K G + DF+ EA +M + H N+++L GV SK++P
Sbjct: 61 YKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP 120
Query: 497 IYIVT 501
+ I+T
Sbjct: 121 MMIIT 125
Score = 90.5 bits (225), Expect = 4e-20
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
++Y +F+S SDVW++G++MWEV T G+ PY L N EV+ + G L P
Sbjct: 221 AISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTP 272
Score = 76.6 bits (189), Expect = 2e-15
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
M +G+L +LR + V L+ M + GM YL NY+HR
Sbjct: 128 MENGALDKFLREKDGEFS--VLQLVGMLRGIAAGMKYLANMNYVHR 171
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 135 bits (342), Expect = 2e-36
Identities = 40/82 (48%), Positives = 55/82 (67%), Gaps = 3/82 (3%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRL 479
D+WE+ L L+E LG+GQFG V G + G VA +K+G+MS D F+ EA +M +L
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 65
Query: 480 QHQNLVQLYGVCSKHRPIYIVT 501
QHQ LV+LY V ++ PIYI+T
Sbjct: 66 QHQRLVRLYAVVTQ-EPIYIIT 86
Score = 90.7 bits (226), Expect = 1e-20
Identities = 21/52 (40%), Positives = 36/52 (69%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+NY F+ KSDVW++G+L+ E+ T G++PY + N EV+ ++RG + +P
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 232
Score = 71.9 bits (177), Expect = 4e-14
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
M +GSL+++L+ + LLDM Q+ +GMA++E NYIHR
Sbjct: 89 MENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIEERNYIHR 133
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 132 bits (335), Expect = 2e-35
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 412 PVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDF 469
V A W ++ EL LL+ +G G+FG V G +RG+ VA +K ++ F
Sbjct: 4 SVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGN-KVAVKCIKNDATAQ-AF 61
Query: 470 IEEAKVMTRLQHQNLVQLYGVCSKHRP-IYIVT 501
+ EA VMT+L+H NLVQL GV + + +YIVT
Sbjct: 62 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94
Score = 90.7 bits (226), Expect = 1e-20
Identities = 22/52 (42%), Positives = 39/52 (75%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
L +FS+KSDVW++G+L+WE+++ G++PY R+ +VV RV++G ++ P
Sbjct: 185 ALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP 236
Score = 72.2 bits (178), Expect = 3e-14
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
M GSL++YLR ++ LL + VC+ M YLE +N++HR
Sbjct: 97 MAKGSLVDYLRSRGRSVL-GGDCLLKFSLDVCEAMEYLEGNNFVHR 141
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 131 bits (332), Expect = 3e-34
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 392 YHRHNSGGLASRLKT--SPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGK 449
H N L+T P P + E+D + + + +G+G+FG V G+
Sbjct: 7 LHFGNGHLKLPGLRTFVDPHTFEDPTQT-VHEFAKELDATNISIDKVVGAGEFGEVCSGR 65
Query: 450 W----RGSIDVA--MMKEGTMSED--DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
+ I VA +K G + DF+ EA +M + H N+++L GV +K +P+ IVT
Sbjct: 66 LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125
Score = 88.2 bits (219), Expect = 3e-19
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ Y +F+S SDVW+YG+++WEV + G+ PY + N +V+ V G L P
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272
Score = 75.1 bits (185), Expect = 7e-15
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
M +GSL ++LR+H+ V L+ M + GM YL Y+HR
Sbjct: 128 MENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMGYVHR 171
>3gqi_B Phospholipase C-gamma-1; phosphorylated kinase, PY-recognition,
tandem SH2 domains, A analog, ATP-binding,
craniosynostosis, disease mutation; HET: PTR DVT ACP;
2.50A {Rattus norvegicus} PDB: 2fci_A* 2pld_A* 2ple_A*
Length = 226
Score = 123 bits (309), Expect = 2e-32
Identities = 38/225 (16%), Positives = 74/225 (32%), Gaps = 72/225 (32%)
Query: 257 WYVGDMS-----RQRAESILKQED-----KEGCFVVRNS-STKGLYTLSLYTKVPHPHVK 305
W+ G + R AE +L + +G F+VR S + G YTLS + V+
Sbjct: 6 WFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRN---GKVQ 62
Query: 306 HYHIKQ---NSRGEFFLSEKHCCHSIPEV------------------------------- 331
H I +FFL++ S+ ++
Sbjct: 63 HCRIHSRQDAGTPKFFLTDNLVFDSLYDLITHYQQVPLRCNEFEMRLSEPVPQTNAHESK 122
Query: 332 ------------------KDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRG 373
++G F+VR + Y +S + +KH ++Q G
Sbjct: 123 EWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAE---GKIKHCRVQQE--G 177
Query: 374 EFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATAG 418
+ + S+ ++++Y+ + +L+ P + G
Sbjct: 178 QTVMLGNSEFDSLVDLISYYEKHPLYRKMKLR-YPINEEALEKIG 221
Score = 85.7 bits (212), Expect = 3e-19
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 254 PKAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNS 313
K WY ++R +AE +L + ++G F+VR + Y +S + +KH ++Q
Sbjct: 121 SKEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAE---GKIKHCRVQQE- 176
Query: 314 RGEFFLSEKHCCHSIPE 330
G+ + S+ +
Sbjct: 177 -GQTVMLGNSEFDSLVD 192
Score = 62.2 bits (151), Expect = 3e-11
Identities = 28/120 (23%), Positives = 46/120 (38%), Gaps = 11/120 (9%)
Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ---NSRGEFFLSEKHCCHSIPEV 389
+G F+VR S + G YTLS + V+H I +FFL++ S+ ++
Sbjct: 35 PDGSFLVRESETFVGDYTLSFWRN---GKVQHCRIHSRQDAGTPKFFLTDNLVFDSLYDL 91
Query: 390 VNYHRHN---SGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVR 446
+ +++ RL + H AE ML+ G F +VR
Sbjct: 92 ITHYQQVPLRCNEFEMRLSEPVPQTNAHESKEWYHASLTRAQAEHMLMRVPRDGAF-LVR 150
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 124 bits (314), Expect = 2e-32
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 419 LSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG----SIDVA--MMKEGTM--SEDDFI 470
+ ++ I +++L LG G FG V G + I+VA K+ +++ F+
Sbjct: 2 MGGPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFM 61
Query: 471 EEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
EA +M L H ++V+L G+ + P +I+
Sbjct: 62 SEAVIMKNLDHPHIVKLIGIIEEE-PTWIIM 91
Score = 90.3 bits (225), Expect = 2e-20
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+N+ RF++ SDVW + V MWE+ + GK P+ L+N +V+ +++G L KP
Sbjct: 185 SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKP 236
Score = 76.9 bits (190), Expect = 8e-16
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
+G L +YL R++N+L V L+ +Q+CK MAYLE N +HR
Sbjct: 94 YPYGELGHYLERNKNSL--KVLTLVLYSLQICKAMAYLESINCVHR 137
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 125 bits (316), Expect = 2e-32
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 10/123 (8%)
Query: 389 VVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRG 448
+ YH H+ + + +A D + + L L++LG G FG V
Sbjct: 1 MSYYHHHHHHDYDIPTTENLYFQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMC 60
Query: 449 KWRGSID-----VA--MMKEGTMSE-DDFIEEAKVMTRLQHQNLVQLYGVC--SKHRPIY 498
++ D VA ++ T DF E +++ LQH N+V+ GVC + R +
Sbjct: 61 RYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120
Query: 499 IVT 501
++
Sbjct: 121 LIM 123
Score = 77.0 bits (190), Expect = 1e-15
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 15/66 (22%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFT---------------CGKMPYGRLKNTEVVDRVQRG 248
L ++FS SDVW++GV+++E+FT G G++ +++ ++
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 279
Query: 249 IILEKP 254
L +P
Sbjct: 280 GRLPRP 285
Score = 76.3 bits (188), Expect = 2e-15
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
+ +GSL +YL++H+ + LL Q+CKGM YL YIHR
Sbjct: 126 LPYGSLRDYLQKHKERID--HIKLLQYTSQICKGMEYLGTKRYIHR 169
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 122 bits (309), Expect = 7e-32
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 415 ATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWR----GSIDVA--MMKEGTMSE-- 466
G S +EI + L +G GQFG V +G + ++ VA K T
Sbjct: 1 GAMGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR 60
Query: 467 DDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
+ F++EA M + H ++V+L GV +++ P++I+
Sbjct: 61 EKFLQEALTMRQFDHPHIVKLIGVITEN-PVWIIM 94
Score = 88.4 bits (220), Expect = 9e-20
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+N+ RF+S SDVW +GV MWE+ G P+ +KN +V+ R++ G L P
Sbjct: 189 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 239
Score = 75.0 bits (185), Expect = 4e-15
Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
G L ++L+ + +L ++ L+ Q+ +AYLE ++HR
Sbjct: 97 CTLGELRSFLQVRKYSL--DLASLILYAYQLSTALAYLESKRFVHR 140
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 122 bits (308), Expect = 1e-31
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 415 ATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG----SIDVA--MMKEGTMSE-- 466
L I +L LLE+LG G FGVVRRG+W ++ VA +K +S+
Sbjct: 4 GEGPLQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE 63
Query: 467 --DDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
DDFI E M L H+NL++LYGV P+ +VT
Sbjct: 64 AMDDFIREVNAMHSLDHRNLIRLYGVVLTP-PMKMVT 99
Score = 86.1 bits (214), Expect = 7e-19
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQR-GIILEKP 254
L FS SD W +GV +WE+FT G+ P+ L ++++ ++ + G L +P
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRP 247
Score = 78.8 bits (195), Expect = 2e-16
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
GSLL+ LR+H+ +G L +QV +GM YLE +IHR
Sbjct: 102 APLGSLLDRLRKHQGHFL--LGTLSRYAVQVAEGMGYLESKRFIHR 145
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 121 bits (307), Expect = 2e-31
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 418 GLSH---DKWEIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVA--MMKEGTMSE 466
G H I +++L ELG G FG V + + VA +K+ T++
Sbjct: 1 GAMHSGIHVQHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAA 60
Query: 467 -DDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
DF EA+++T LQH+++V+ YGVC P+ +V
Sbjct: 61 RKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVF 96
Score = 89.6 bits (223), Expect = 4e-20
Identities = 24/52 (46%), Positives = 43/52 (82%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
+ Y +F+++SDVW++GV++WE+FT GK P+ +L NTEV++ + +G +LE+P+
Sbjct: 207 IMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPR 258
Score = 65.3 bits (160), Expect = 6e-12
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 13/59 (22%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------------LLDMCIQVCKGMAYLERHNYIHR 46
M+HG L +LR H V +L + Q+ GM YL +++HR
Sbjct: 99 MKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHR 157
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 119 bits (301), Expect = 2e-30
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 392 YHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWR 451
H H+ G T ++ P S WEI+ +E+ML +GSG FG V +GKW
Sbjct: 5 SHHHHHHG------TQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWH 58
Query: 452 GSIDVAMMKEGTMSED---DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
G + V ++K + + F E V+ + +H N++ G +K + IVT
Sbjct: 59 GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD-NLAIVT 110
Score = 66.2 bits (162), Expect = 4e-12
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETK 49
SL +L E + L+D+ Q +GM YL N IHR+ K
Sbjct: 113 CEGSSLYKHLHVQETKF--QMFQLIDIARQTAQGMDYLHAKNIIHRDMK 159
Score = 58.1 bits (141), Expect = 2e-09
Identities = 18/52 (34%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 198 ELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE-VVDRVQRG 248
E+I ++ + FS +SDV++YG++++E+ T G++PY + N + ++ V RG
Sbjct: 204 EVI-RMQDNNPFSFQSDVYSYGIVLYELMT-GELPYSHINNRDQIIFMVGRG 253
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 119 bits (300), Expect = 2e-30
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVA--MMKEGTMS-EDDFIEE 472
+I +L+ E LG G F + +G R +V ++ + + + F E
Sbjct: 3 HKIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEA 62
Query: 473 AKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
A +M++L H++LV YGVC +V
Sbjct: 63 ASMMSKLSHKHLVLNYGVCVCGDENILVQ 91
Score = 86.6 bits (215), Expect = 4e-19
Identities = 12/53 (22%), Positives = 23/53 (43%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
+ N + +D W++G +WE+ + G P L + + + L PK
Sbjct: 189 IENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPK 241
Score = 76.2 bits (188), Expect = 1e-15
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
++ GSL YL++++N + N+ L++ Q+ M +LE + IH
Sbjct: 94 VKFGSLDTYLKKNKNCI--NILWKLEVAKQLAAAMHFLEENTLIHG 137
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 120 bits (303), Expect = 2e-30
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 24/152 (15%)
Query: 374 EFFLSEKHCCHSIPEVVNYHRHNSGGLA--------SRLKTSPCDR---PVPATAGLSH- 421
++ H + IP N + + G S+L+TS P AG +
Sbjct: 2 SYYHHHHHHDYDIPTTENLYFQGAMGSELQSPEYKLSKLRTSTIMTDYNPNYCFAGKTSS 61
Query: 422 --DKWEIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVA--MMKEGTMSED--DF 469
D E+ + L+ LG G FG V G+ G + VA + E +D DF
Sbjct: 62 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 121
Query: 470 IEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
+ EA ++++ HQN+V+ GV + P +I+
Sbjct: 122 LMEALIISKFNHQNIVRCIGVSLQSLPRFILL 153
Score = 84.8 bits (210), Expect = 5e-18
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
F+SK+D W++GVL+WE+F+ G MPY N EV++ V G ++ PK
Sbjct: 258 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 309
Score = 68.6 bits (168), Expect = 1e-12
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL----LLDMCIQVCKGMAYLERHNYIHR 46
M G L ++LR L LL + + G YLE +++IHR
Sbjct: 156 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHR 205
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 117 bits (295), Expect = 8e-30
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 419 LSHDKWEIDPAELMLLE-ELGSGQFGVVRRGKWRGS---IDVA--MMKEGTMS---EDDF 469
+ + +D L L + ELGSG FG V++G ++ VA ++K +D+
Sbjct: 6 IRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDEL 65
Query: 470 IEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
+ EA VM +L + +V++ G+C +V
Sbjct: 66 LAEANVMQQLDNPYIVRMIGICEAE-SWMLVM 96
Score = 91.5 bits (228), Expect = 9e-21
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+NY +FSSKSDVW++GVLMWE F+ G+ PY +K +EV +++G + P
Sbjct: 191 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 242
Score = 72.7 bits (179), Expect = 2e-14
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
G L YL+++ + ++++ QV GM YLE N++HR
Sbjct: 99 AELGPLNKYLQQNRHV---KDKNIIELVHQVSMGMKYLEESNFVHR 141
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 116 bits (293), Expect = 1e-29
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 10/91 (10%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID-----VA--MMKEGTMSE-DDFIEE 472
D + + L L++LG G FG V ++ D VA ++ T DF E
Sbjct: 2 SDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 61
Query: 473 AKVMTRLQHQNLVQLYGVCSK--HRPIYIVT 501
+++ LQH N+V+ GVC R + ++
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 92
Score = 77.7 bits (192), Expect = 4e-16
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 15/66 (22%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFT---------------CGKMPYGRLKNTEVVDRVQRG 248
L ++FS SDVW++GV+++E+FT G G++ +++ ++
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 248
Query: 249 IILEKP 254
L +P
Sbjct: 249 GRLPRP 254
Score = 76.9 bits (190), Expect = 8e-16
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
+ +GSL +YL++H+ + + LL Q+CKGM YL YIHR
Sbjct: 95 LPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYLGTKRYIHR 138
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 116 bits (293), Expect = 4e-29
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Query: 393 HRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG 452
S L RL +P + +P E + + ++G G FG V + + G
Sbjct: 11 TTLPSELLLDRLHPNPMYQRMPLLLNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPG 70
Query: 453 SID------VA--MMKEGTMSED--DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
+ VA M+KE ++ DF EA +M + N+V+L GVC+ +P+ ++
Sbjct: 71 LLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLF 129
Score = 87.4 bits (217), Expect = 5e-19
Identities = 23/52 (44%), Positives = 37/52 (71%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
+ Y R++++SDVWAYGV++WE+F+ G PY + + EV+ V+ G IL P+
Sbjct: 248 IFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPE 299
Score = 58.9 bits (143), Expect = 1e-09
Identities = 15/67 (22%), Positives = 22/67 (32%), Gaps = 21/67 (31%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL---------------------LLDMCIQVCKGMAYLE 39
M +G L +LR ++ L + QV GMAYL
Sbjct: 132 MAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS 191
Query: 40 RHNYIHR 46
++HR
Sbjct: 192 ERKFVHR 198
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 115 bits (289), Expect = 1e-28
Identities = 24/122 (19%), Positives = 43/122 (35%), Gaps = 23/122 (18%)
Query: 391 NYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKW 450
++H H+ G L P D L + +LG G FG V +
Sbjct: 5 HHHHHHHHGALEVLFQGPGD------------PTVFHKRYLKKIRDLGEGHFGKVSLYCY 52
Query: 451 RGSID-----VA--MMKE--GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHR--PIYI 499
+ D VA +K G + +E ++ L H+++++ G C + +
Sbjct: 53 DPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112
Query: 500 VT 501
V
Sbjct: 113 VM 114
Score = 75.1 bits (185), Expect = 5e-15
Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 14/67 (20%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGK--------------MPYGRLKNTEVVDRVQRGI 249
L +F SDVW++GV ++E+ T + G++ + + ++RG
Sbjct: 209 LKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE 268
Query: 250 ILEKPKA 256
L +P
Sbjct: 269 RLPRPDK 275
Score = 72.0 bits (177), Expect = 5e-14
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
+ GSL +YL RH L LL Q+C+GMAYL +YIHR
Sbjct: 117 VPLGSLRDYLPRHSIGLA----QLLLFAQQICEGMAYLHAQHYIHR 158
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; 2.40A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1xr0_A
Length = 370
Score = 115 bits (290), Expect = 2e-28
Identities = 39/162 (24%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 362 VKHYHIKQNSRGEFFLSEKHCC--HSIPEVVNYHRHNSGGLASRLKTSPCD-RPVPATAG 418
H+H Q+ L+++ + NS R+ T P AG
Sbjct: 5 HHHHHHSQDPPAVHKLTKRIPLRRQVTVSAESSSSMNSNTPLVRITTRLSSTADTPMLAG 64
Query: 419 LSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVA--MMKEG 462
+S KWE +L L + LG G FG V + G ++ VA M+K+
Sbjct: 65 VSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 124
Query: 463 TMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVT 501
+D D + E ++M + +H+N++ L G C++ P+Y++
Sbjct: 125 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 166
Score = 81.3 bits (201), Expect = 6e-17
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L ++ +SDVW++GVLMWE+FT G PY + E+ ++ G ++KP
Sbjct: 277 LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA 328
Score = 60.8 bits (148), Expect = 3e-10
Identities = 14/59 (23%), Positives = 18/59 (30%), Gaps = 13/59 (22%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------------LLDMCIQVCKGMAYLERHNYIHR 46
G+L YLR L+ Q+ +GM YL IHR
Sbjct: 169 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHR 227
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 113 bits (284), Expect = 3e-28
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 422 DKWEIDPAELMLLE-ELGSGQFGVVRRGKWR---GSIDVA--MMKEGT--MSEDDFIEEA 473
K + L++ + ELG G FG VR+G +R IDVA ++K+GT ++ + EA
Sbjct: 2 KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 61
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
++M +L + +V+L GVC + +V
Sbjct: 62 QIMHQLDNPYIVRLIGVCQAE-ALMLVM 88
Score = 89.2 bits (222), Expect = 5e-20
Identities = 23/52 (44%), Positives = 37/52 (71%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+N+ +FSS+SDVW+YGV MWE + G+ PY ++K EV+ +++G +E P
Sbjct: 184 CINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP 235
Score = 73.8 bits (182), Expect = 9e-15
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
G L +L + V + ++ QV GM YLE N++HR
Sbjct: 91 AGGGPLHKFLVGKREEI--PVSNVAELLHQVSMGMKYLEEKNFVHR 134
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 113 bits (285), Expect = 3e-28
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 10/93 (10%)
Query: 418 GLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWR-----GSIDVA--MMKE--GTMSEDD 468
+ EL L+ LGSG FG V +G W I V ++++ G S
Sbjct: 2 AMKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQA 61
Query: 469 FIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
+ + L H ++V+L G+C + +VT
Sbjct: 62 VTDHMLAIGSLDHAHIVRLLGLCPGS-SLQLVT 93
Score = 88.1 bits (219), Expect = 2e-19
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+++ +++ +SDVW+YGV +WE+ T G PY L+ EV D +++G L +P
Sbjct: 189 IHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQP 239
Score = 78.1 bits (193), Expect = 5e-16
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
+ GSLL+++R+H LG LLL+ +Q+ KGM YLE H +HR
Sbjct: 96 LPLGSLLDHVRQHRGALG--PQLLLNWGVQIAKGMYYLEEHGMVHR 139
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 112 bits (283), Expect = 8e-28
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID------VA--MMKEGTMSE-DDFIEE 472
I +++L ELG G FG V + + VA +KE + S DF E
Sbjct: 34 CVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQRE 93
Query: 473 AKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
A+++T LQHQ++V+ +GVC++ RP+ +V
Sbjct: 94 AELLTMLQHQHIVRFFGVCTEGRPLLMVF 122
Score = 88.1 bits (219), Expect = 3e-19
Identities = 24/52 (46%), Positives = 41/52 (78%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
+ Y +F+++SDVW++GV++WE+FT GK P+ +L NTE +D + +G LE+P+
Sbjct: 232 ILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPR 283
Score = 64.6 bits (158), Expect = 2e-11
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 12/58 (20%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL------------LLDMCIQVCKGMAYLERHNYIHR 46
MRHG L +LR H G LL + QV GM YL +++HR
Sbjct: 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHR 182
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 111 bits (280), Expect = 2e-27
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 10/90 (11%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVA--MMKEGTMSED--DFIE 471
D E+ + L+ LG G FG V G+ G + VA + E +D DF+
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 82
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
EA ++++ HQN+V+ GV + P +I+
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILM 112
Score = 85.8 bits (213), Expect = 1e-18
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
F+SK+D W++GVL+WE+F+ G MPY N EV++ V G ++ PK
Sbjct: 217 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 268
Score = 70.0 bits (172), Expect = 3e-13
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL----LLDMCIQVCKGMAYLERHNYIHR 46
M G L ++LR L LL + + G YLE +++IHR
Sbjct: 115 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHR 164
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 110 bits (278), Expect = 3e-27
Identities = 19/92 (20%), Positives = 35/92 (38%), Gaps = 10/92 (10%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG-----SIDVA--MMKE-GTMSEDDFIE 471
D + L + +LG G FG V ++ VA ++ G + DF
Sbjct: 14 CQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR 73
Query: 472 EAKVMTRLQHQNLVQLYGVC--SKHRPIYIVT 501
E +++ L +V+ GV + + +V
Sbjct: 74 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVM 105
Score = 77.0 bits (190), Expect = 1e-15
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
+ G L ++L+RH L LL Q+CKGM YL +HR
Sbjct: 108 LPSGCLRDFLQRHRARLD--ASRLLLYSSQICKGMEYLGSRRCVHR 151
Score = 76.6 bits (189), Expect = 2e-15
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 14/67 (20%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPY--------------GRLKNTEVVDRVQRGI 249
L+ FS +SDVW++GV+++E+FT + +++ ++ G
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQ 261
Query: 250 ILEKPKA 256
L P A
Sbjct: 262 RLPAPPA 268
>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase;
NMR {Homo sapiens}
Length = 125
Score = 105 bits (263), Expect = 4e-27
Identities = 38/96 (39%), Positives = 59/96 (61%), Gaps = 7/96 (7%)
Query: 332 KDKEGCFVVRNSSTKGLYTLSLYTKVP---HPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
+ KEG F+VR+SS G YT+S++ K ++HY + + +++L+EKH +IPE
Sbjct: 30 EGKEGGFIVRDSSKAGKYTVSVFAKSTGDPQGVIRHYVVCSTPQSQYYLAEKHLFSTIPE 89
Query: 389 VVNYHRHNSGGLASRLKTSPC---DRPVPATAGLSH 421
++NYH+HNS GL SRLK P ++ P+T H
Sbjct: 90 LINYHQHNSAGLISRLKY-PVSQQNKNAPSTHHHHH 124
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 110 bits (277), Expect = 4e-27
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS-IDVAM---MKEGTMSEDDFIEEAKV 475
S P++L+ E LG G FG + R + + M ++ ++ F++E KV
Sbjct: 1 SMPHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKV 60
Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVT 501
M L+H N+++ GV K + + +T
Sbjct: 61 MRCLEHPNVLKFIGVLYKDKRLNFIT 86
Score = 65.1 bits (159), Expect = 9e-12
Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
++ G+L ++ ++ + + GMAYL N IHR
Sbjct: 89 IKGGTLRGIIKSMDSQY--PWSQRVSFAKDIASGMAYLHSMNIIHR 132
Score = 57.7 bits (140), Expect = 2e-09
Identities = 10/46 (21%), Positives = 20/46 (43%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
++N + K DV+++G+++ E+ L T RG
Sbjct: 193 MINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRG 238
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 109 bits (274), Expect = 5e-27
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSED---DFIEEAKVM 476
+ D WEI ++ + + +GSG FG V +GKW G + V M+ + F E V+
Sbjct: 15 AADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
+ +H N++ G + + IVT
Sbjct: 75 RKTRHVNILLFMGYSTAP-QLAIVT 98
Score = 63.9 bits (156), Expect = 2e-11
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
SL ++L E + L+D+ Q +GM YL + IHR
Sbjct: 101 CEGSSLYHHLHASETKF--EMKKLIDIARQTARGMDYLHAKSIIHR 144
Score = 55.8 bits (135), Expect = 9e-09
Identities = 17/52 (32%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 198 ELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE-VVDRVQRG 248
E+I + +S +SDV+A+G++++E+ T G++PY + N + +++ V RG
Sbjct: 192 EVIRM-QDSNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIEMVGRG 241
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET;
nucleotide-binding, hirschsprung disease,
phosphorylation, disease mutation; HET: ACK; 2.00A {Homo
sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A*
2ivv_A*
Length = 314
Score = 109 bits (275), Expect = 8e-27
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 10/90 (11%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVA--MMKEGTMSED--DFIE 471
KWE L+L + LG G+FG V + VA M+KE + D +
Sbjct: 16 PKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLS 75
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
E V+ ++ H ++++LYG CS+ P+ ++
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIV 105
Score = 83.4 bits (207), Expect = 7e-18
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L ++++SDVW++GVL+WE+ T G PY + + + ++ G +E+P
Sbjct: 224 LFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPD 275
Score = 59.2 bits (144), Expect = 8e-10
Identities = 15/67 (22%), Positives = 23/67 (34%), Gaps = 21/67 (31%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL---------------------LLDMCIQVCKGMAYLE 39
++GSL +LR G +G L+ Q+ +GM YL
Sbjct: 108 AKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA 167
Query: 40 RHNYIHR 46
+HR
Sbjct: 168 EMKLVHR 174
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 113 bits (283), Expect = 1e-26
Identities = 39/198 (19%), Positives = 79/198 (39%), Gaps = 22/198 (11%)
Query: 325 CHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKH----YHIKQNSRGEFFLS-- 378
+S E KD++G ++ + T++ + ++ Y N + F+
Sbjct: 273 QYSNSEDKDRKGMLQLKIAGAPEPLTVTAPSLTIAENMADLIDGYCRLVNGATQSFIIRP 332
Query: 379 EKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDR-------PVPATAGLSHDKWEIDPAEL 431
+K ++P + + G+ S + S +EI +
Sbjct: 333 QKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERI 392
Query: 432 MLLEELGSGQFGVVRRGKWR----GSIDVA--MMKEGTMSE--DDFIEEAKVMTRLQHQN 483
L +G GQFG V +G + ++ VA K T + F++EA M + H +
Sbjct: 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 452
Query: 484 LVQLYGVCSKHRPIYIVT 501
+V+L GV +++ P++I+
Sbjct: 453 IVKLIGVITEN-PVWIIM 469
Score = 86.1 bits (213), Expect = 6e-18
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+N+ RF+S SDVW +GV MWE+ G P+ +KN +V+ R++ G L P
Sbjct: 564 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 614
Score = 73.0 bits (179), Expect = 8e-14
Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
G L ++L+ + +L ++ L+ Q+ +AYLE ++HR
Sbjct: 472 CTLGELRSFLQVRKFSL--DLASLILYAYQLSTALAYLESKRFVHR 515
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 108 bits (271), Expect = 2e-26
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVA--MMKEGTMSED--DFIEEA 473
EI + + +EELG +FG V +G G + VA +K+ +F EA
Sbjct: 4 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 63
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
+ RLQH N+V L GV +K +P+ ++
Sbjct: 64 MLRARLQHPNVVCLLGVVTKDQPLSMIF 91
Score = 85.0 bits (211), Expect = 1e-18
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ Y +FS SD+W+YGV++WEVF+ G PY N +VV+ ++ +L P
Sbjct: 202 IMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCP 252
Score = 63.0 bits (154), Expect = 4e-11
Identities = 11/59 (18%), Positives = 18/59 (30%), Gaps = 13/59 (22%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------------LLDMCIQVCKGMAYLERHNYIHR 46
HG L +L + + Q+ GM YL H+ +H+
Sbjct: 94 CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHK 152
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 108 bits (273), Expect = 2e-26
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKW-----RGSIDVA--MMKEGTM--SEDDFIEEAKVM 476
+ E ++ LGSG FG V +G W + I VA ++E T + + ++EA VM
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
+ + ++ +L G+C + ++T
Sbjct: 72 ASVDNPHVCRLLGICLTS-TVQLIT 95
Score = 90.8 bits (226), Expect = 3e-20
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + ++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 241
Score = 79.2 bits (196), Expect = 2e-16
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR
Sbjct: 98 MPFGCLLDYVREHKDNIG--SQYLLNWCVQIAKGMNYLEDRRLVHR 141
>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain,
phosphotyrosine binding domain, protein tyrosine kinase,
signal transduction; NMR {Homo sapiens}
Length = 110
Score = 102 bits (256), Expect = 2e-26
Identities = 34/77 (44%), Positives = 54/77 (70%), Gaps = 3/77 (3%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVP---HPHVKHYHIKQNS 313
W+ G++SR ++E +L+Q+ KEG F+VRNSS G+YT+SL++K VKHYH+ N+
Sbjct: 13 WFAGNISRSQSEQLLRQKGKEGAFMVRNSSQVGMYTVSLFSKAVNDKKGTVKHYHVHTNA 72
Query: 314 RGEFFLSEKHCCHSIPE 330
+ +L+E +C SIP+
Sbjct: 73 ENKLYLAENYCFDSIPK 89
Score = 99.2 bits (248), Expect = 3e-25
Identities = 37/81 (45%), Positives = 56/81 (69%), Gaps = 4/81 (4%)
Query: 332 KDKEGCFVVRNSSTKGLYTLSLYTKVP---HPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
K KEG F+VRNSS G+YT+SL++K VKHYH+ N+ + +L+E +C SIP+
Sbjct: 30 KGKEGAFMVRNSSQVGMYTVSLFSKAVNDKKGTVKHYHVHTNAENKLYLAENYCFDSIPK 89
Query: 389 VVNYHRHNSGGLASRLKTSPC 409
+++YH+HNS G+ +RL+ P
Sbjct: 90 LIHYHQHNSAGMITRLRH-PV 109
>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase,
tyrosine-protein kinase LYK, kinase EMT, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 85
Score = 101 bits (253), Expect = 3e-26
Identities = 28/74 (37%), Positives = 48/74 (64%)
Query: 117 RKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSN 176
R+P VV+ALY ++ + +L+L + EY ++D ++ HWW+V+D+NG GY+PS+
Sbjct: 11 RRPLWEPEETVVIALYDYQTNDPQELALRRNEEYCLLDSSEIHWWRVQDRNGHEGYVPSS 70
Query: 177 YVKEKELLGLQKYD 190
Y+ EK L+ Y+
Sbjct: 71 YLVEKSPNNLETYE 84
Score = 67.4 bits (165), Expect = 2e-14
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 66 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
P VV+ALY ++ + +L+L + EY ++D ++ HWW+V+D+NG
Sbjct: 13 PLWEPEETVVIALYDYQTNDPQELALRRNEEYCLLDSSEIHWWRVQDRNG 62
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene
homolog; kinase, structure, inhibitor, STI-571, gleevec,
transferase activator; HET: STI; 1.60A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Length = 313
Score = 106 bits (268), Expect = 6e-26
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVA--MMKEGTMSED--DFIE 471
KWE L + LG+G FG V G ++ VA M+K + +
Sbjct: 16 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS 75
Query: 472 EAKVMTRL-QHQNLVQLYGVCSKHRPIYIVT 501
E KV++ L H N+V L G C+ P ++T
Sbjct: 76 ELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 106
Score = 81.9 bits (203), Expect = 2e-17
Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKPK 255
+ ++ +SDVW+YG+ +WE+F+ G PY G +++ ++ G + P+
Sbjct: 219 IFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 271
Score = 63.0 bits (154), Expect = 4e-11
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 15/61 (24%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL---------------LLDMCIQVCKGMAYLERHNYIH 45
+G LLN+LRR ++ + LL QV KGMA+L N IH
Sbjct: 109 CCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIH 168
Query: 46 R 46
R
Sbjct: 169 R 169
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain,
kinase inhibitor complex, transferase; HET: 5CN; 1.80A
{Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A*
3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Length = 333
Score = 106 bits (268), Expect = 9e-26
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRG------KWRGSIDVA--MMKEGTMSED--DFI 470
++KWE L + LG+G FG V K + VA M+K +++ +
Sbjct: 38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVT 501
E K+M+ L QH+N+V L G C+ P+ ++T
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVIT 129
Score = 81.9 bits (203), Expect = 3e-17
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKPK 255
+ ++ +SDVW+YG+L+WE+F+ G PY G L N++ V+ G + +P
Sbjct: 238 IFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPA 290
Score = 65.4 bits (160), Expect = 8e-12
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 11/57 (19%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-----------LLDMCIQVCKGMAYLERHNYIHR 46
+G LLN+LRR L + LL QV +GMA+L N IHR
Sbjct: 132 CCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHR 188
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 105 bits (265), Expect = 2e-25
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 17/105 (16%)
Query: 407 SPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVA--M 458
S D VP D+WE+ ++ + ELG G FG+V G +G VA
Sbjct: 10 SAADVYVP-------DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKT 62
Query: 459 MKEGTMSED--DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
+ E + +F+ EA VM ++V+L GV S+ +P ++
Sbjct: 63 VNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM 107
Score = 83.1 bits (206), Expect = 1e-17
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L F++ SDVW++GV++WE+ T + PY L N +V+ V G +L+KP
Sbjct: 212 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 263
Score = 65.4 bits (160), Expect = 7e-12
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 7/53 (13%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------LLDMCIQVCKGMAYLERHNYIHR 46
M G L +YLR + N L ++ M ++ GMAYL + ++HR
Sbjct: 110 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 162
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 105 bits (265), Expect = 2e-25
Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 23/125 (18%)
Query: 391 NYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKW 450
++H H+S GL R ++ + ID L+L + LG G+FG V G
Sbjct: 5 HHHHHHSSGLVPRGSEELQNKL---------EDVVIDRNLLILGKILGEGEFGSVMEGNL 55
Query: 451 RG----SIDVA--MMKEGTMSED---DFIEEAKVMTRLQHQNLVQLYGVCSKHRPI---- 497
+ S+ VA MK S+ +F+ EA M H N+++L GVC +
Sbjct: 56 KQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPK 115
Query: 498 -YIVT 501
++
Sbjct: 116 PMVIL 120
Score = 85.0 bits (211), Expect = 2e-18
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L ++SKSDVWA+GV MWE+ T G PY ++N E+ D + G L++P+
Sbjct: 221 LADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPE 272
Score = 67.3 bits (165), Expect = 2e-12
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 1 MRHGSLLNYLRRHENTLGGN---VGLLLDMCIQVCKGMAYLERHNYIHR 46
M++G L YL G + LL + + GM YL N++HR
Sbjct: 123 MKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHR 171
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A
{Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A*
2p4i_A* 3l8p_A* 2wqb_A*
Length = 327
Score = 105 bits (265), Expect = 2e-25
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVA--MMKEGTMSED--DFIEEA 473
+D ++ + +G G FG V + + + +D A MKE +D DF E
Sbjct: 17 TIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGEL 76
Query: 474 KVMTRL-QHQNLVQLYGVCSKHRPIYIVT 501
+V+ +L H N++ L G C +Y+
Sbjct: 77 EVLCKLGHHPNIINLLGACEHRGYLYLAI 105
Score = 86.9 bits (216), Expect = 6e-19
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
LNY+ +++ SDVW+YGVL+WE+ + G PY + E+ +++ +G LEKP
Sbjct: 213 LNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP 263
Score = 62.7 bits (153), Expect = 7e-11
Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 13/59 (22%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------------LLDMCIQVCKGMAYLERHNYIHR 46
HG+LL++LR+ LL V +GM YL + +IHR
Sbjct: 108 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHR 166
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 104 bits (262), Expect = 2e-25
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA-------MMKEGTMSEDDFIEEAKVM 476
EID AEL L E +G G FG V R W G +VA ++ + + ++ +EAK+
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVYRAFWIGD-EVAVKAARHDPDEDISQTIENVRQEAKLF 60
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
L+H N++ L GVC K + +V
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVM 85
Score = 60.7 bits (148), Expect = 2e-10
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRV-QRGIILEKPK 255
V+ + FS SDVW+YGVL+WE+ T G++P+ + V V + L P
Sbjct: 185 VIRASMFSKGSDVWSYGVLLWELLT-GEVPFRGIDGLAVAYGVAMNKLALPIPS 237
Score = 53.8 bits (130), Expect = 3e-08
Identities = 13/49 (26%), Positives = 19/49 (38%), Gaps = 7/49 (14%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNY---IHR 46
R G L L +L++ +Q+ +GM YL IHR
Sbjct: 88 ARGGPLNRVLSGKRIPPD----ILVNWAVQIARGMNYLHDEAIVPIIHR 132
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition,
juxtamembrane domain, transferase; 2.10A {Homo sapiens}
SCOP: d.144.1.7
Length = 344
Score = 105 bits (265), Expect = 2e-25
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVA--MMKEGTMSED--DFI 470
KWE L + LGSG FG V G SI VA M+KE S + +
Sbjct: 37 DLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALM 96
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVT 501
E K+MT+L H+N+V L G C+ PIY++
Sbjct: 97 SELKMMTQLGSHENIVNLLGACTLSGPIYLIF 128
Score = 80.0 bits (198), Expect = 1e-16
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKPK 255
L ++ KSDVW+YG+L+WE+F+ G PY G + +Q G +++P
Sbjct: 246 LFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPF 298
Score = 60.0 bits (146), Expect = 5e-10
Identities = 18/66 (27%), Positives = 23/66 (34%), Gaps = 20/66 (30%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL--------------------LLDMCIQVCKGMAYLER 40
+G LLNYLR + LL QV KGM +LE
Sbjct: 131 CCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF 190
Query: 41 HNYIHR 46
+ +HR
Sbjct: 191 KSCVHR 196
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 104 bits (262), Expect = 3e-25
Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 11/91 (12%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG-----SIDVA--MMKE--GTMSEDDFIEE 472
D + L + +LG G FG V ++ VA +K G D +E
Sbjct: 14 DPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKE 73
Query: 473 AKVMTRLQHQNLVQLYGVCSKH--RPIYIVT 501
+++ L H+N+V+ G+C++ I ++
Sbjct: 74 IEILRNLYHENIVKYKGICTEDGGNGIKLIM 104
Score = 76.6 bits (189), Expect = 1e-15
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 14/65 (21%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKM--------------PYGRLKNTEVVDRVQRGI 249
L ++F SDVW++GV + E+ T +G++ T +V+ ++ G
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK 260
Query: 250 ILEKP 254
L P
Sbjct: 261 RLPCP 265
Score = 76.2 bits (188), Expect = 2e-15
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
+ GSL YL +++N + N+ L +Q+CKGM YL Y+HR
Sbjct: 107 LPSGSLKEYLPKNKNKI--NLKQQLKYAVQICKGMDYLGSRQYVHR 150
>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding
protein, antibody mimic, protein-protein SH2 domain,
ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB:
3uyo_A 3t04_A 1ab2_A
Length = 112
Score = 99.2 bits (248), Expect = 3e-25
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
G F+VR S S+ G ++SL + V HY I S G+ ++S + +++ E+V++
Sbjct: 25 INGSFLVRESESSPGQRSISLRYE---GRVYHYRINTASDGKLYVSSESRFNTLAELVHH 81
Query: 393 HRHNSGGLASRLKTSPCDRPVPATAGLSHD 422
H + GL + L R P G+S +
Sbjct: 82 HSTVADGLITTLHYPAPKRNKPTVYGVSPN 111
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; HET: PTR ACP; 1.80A
{Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A*
2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A*
3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A*
3js2_A* 3ky2_A ...
Length = 334
Score = 104 bits (262), Expect = 5e-25
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 19/107 (17%)
Query: 414 PATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVA-- 457
P AG+S KWE +L L + LG G FG V + G ++ VA
Sbjct: 14 PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 458 MMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVT 501
M+K+ +D D + E ++M + +H+N++ L G C++ P+Y++
Sbjct: 74 MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 120
Score = 81.6 bits (202), Expect = 4e-17
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L ++ +SDVW++GVLMWE+FT G PY + E+ ++ G ++KP
Sbjct: 231 LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA 282
Score = 60.8 bits (148), Expect = 3e-10
Identities = 14/59 (23%), Positives = 18/59 (30%), Gaps = 13/59 (22%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------------LLDMCIQVCKGMAYLERHNYIHR 46
G+L YLR L+ Q+ +GM YL IHR
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHR 181
>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 125
Score = 98.9 bits (247), Expect = 5e-25
Identities = 34/92 (36%), Positives = 56/92 (60%), Gaps = 7/92 (7%)
Query: 332 KDKEGCFVVRNSSTKGLYTLSLYTKVP---HPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
+ KEG F+VR+S G YT+S++ +KHY IK+N G+++++E+H SIPE
Sbjct: 35 ESKEGAFIVRDSRHLGSYTISVFMGARRSTEAAIKHYQIKKNDSGQWYVAERHAFQSIPE 94
Query: 389 VVNYHRHNSGGLASRLKTSPCDRP---VPATA 417
++ YH+HN+ GL +RL+ P P++
Sbjct: 95 LIWYHQHNAAGLMTRLRY-PVGLMGSSGPSSG 125
Score = 98.9 bits (247), Expect = 6e-25
Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVP---HPHVKHYHIKQNS 313
WY +++R +AE +L+QE KEG F+VR+S G YT+S++ +KHY IK+N
Sbjct: 18 WYHRNITRNQAEHLLRQESKEGAFIVRDSRHLGSYTISVFMGARRSTEAAIKHYQIKKND 77
Query: 314 RGEFFLSEKHCCHSIPE 330
G+++++E+H SIPE
Sbjct: 78 SGQWYVAERHAFQSIPE 94
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain,
phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Length = 67
Score = 95.8 bits (239), Expect = 2e-24
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLG 185
++VVA+Y F+A E DL LE+G EY +++ HWW+ +DK GS GYIPSNYV K+
Sbjct: 3 EIVVAMYDFQATEAHDLRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGKKSNN 62
Query: 186 LQKYD 190
L +YD
Sbjct: 63 LDQYD 67
Score = 65.0 bits (159), Expect = 1e-13
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
++VVA+Y F+A E DL LE+G EY +++ HWW+ +DK G
Sbjct: 3 EIVVAMYDFQATEAHDLRLERGQEYIILEKNDLHWWRARDKYG 45
>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS
proline, domain swapped dimer, SH transferase; HET: CIT;
2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A
1lum_A 1lun_A 2k79_B 2k7a_B
Length = 118
Score = 97.0 bits (242), Expect = 2e-24
Identities = 37/88 (42%), Positives = 57/88 (64%), Gaps = 5/88 (5%)
Query: 332 KDKEGCFVVRNSSTKGLYTLSLYTK---VPHPHVKHYHIKQ--NSRGEFFLSEKHCCHSI 386
KEG F+VR+S T G YT+S++TK +P +KHYHIK+ +S ++++EK+ SI
Sbjct: 28 TGKEGAFMVRDSRTPGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSI 87
Query: 387 PEVVNYHRHNSGGLASRLKTSPCDRPVP 414
P ++ YH++N GGL +RL+ C P
Sbjct: 88 PLLIQYHQYNGGGLVTRLRYPVCGSPGI 115
Score = 94.7 bits (236), Expect = 1e-23
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTK---VPHPHVKHYHIKQ-- 311
WY +SR +AE +L KEG F+VR+S T G YT+S++TK +P +KHYHIK+
Sbjct: 11 WYNKSISRDKAEKLLLDTGKEGAFMVRDSRTPGTYTVSVFTKAIISENPCIKHYHIKETN 70
Query: 312 NSRGEFFLSEKHCCHSIPE 330
+S ++++EK+ SIP
Sbjct: 71 DSPKRYYVAEKYVFDSIPL 89
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 102 bits (255), Expect = 3e-24
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 389 VVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRG 448
+ ++H H+ P + + D +I +L + E++G+G FG V R
Sbjct: 1 MKHHHHHHP----MSDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRA 56
Query: 449 KWRGSIDVA--MMKEGTMSED---DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
+W GS DVA ++ E + +F+ E +M RL+H N+V G ++ + IVT
Sbjct: 57 EWHGS-DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113
Score = 52.7 bits (127), Expect = 1e-07
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRV 245
VL + KSDV+++GV++WE+ T + P+G L +VV V
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWELAT-LQQPWGNLNPAQVVAAV 251
Score = 48.5 bits (116), Expect = 2e-06
Identities = 15/48 (31%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNY--IHR 46
+ GSL L + + L M V KGM YL N +HR
Sbjct: 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHR 163
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 102 bits (256), Expect = 3e-24
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKW-----RGSIDVA--MMKEGTM--SEDDFIEEAKVM 476
+ E ++ LGSG FG V +G W + I VA ++E T + + ++EA VM
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
+ + ++ +L G+C + ++T
Sbjct: 72 ASVDNPHVCRLLGICLTS-TVQLIT 95
Score = 87.0 bits (216), Expect = 6e-19
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
+ + ++ +SDVW+YGV +WE+ T G PY + +E+ +++G L +P
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 241
Score = 76.2 bits (188), Expect = 2e-15
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
M G LL+Y+R H++ +G LL+ C+Q+ KGM YLE +HR
Sbjct: 98 MPFGCLLDYVREHKDNIG--SQYLLNWCVQIAKGMNYLEDRRLVHR 141
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis,
nucleotide-binding, inhibitor, phosphorylation receptor,
transferase, transmembrane; HET: 00J; 1.50A {Homo
sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A*
3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A*
2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A*
3cpc_A* ...
Length = 316
Score = 101 bits (254), Expect = 5e-24
Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVA--MMKEGTMSED--DFIE 471
KWE L L + LG G FG V G VA M+KEG + +
Sbjct: 20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 79
Query: 472 EAKVMTRL-QHQNLVQLYGVCSKH-RPIYIVT 501
E K++ + H N+V L G C+K P+ ++
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 111
Score = 80.4 bits (199), Expect = 8e-17
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKP 254
+ ++ +SDVW++GVL+WE+F+ G PY G + E R++ G + P
Sbjct: 222 IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273
Score = 62.3 bits (152), Expect = 8e-11
Identities = 16/59 (27%), Positives = 20/59 (33%), Gaps = 13/59 (22%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGL-------------LLDMCIQVCKGMAYLERHNYIHR 46
+ G+L YLR N L+ QV KGM +L IHR
Sbjct: 114 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHR 172
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 101 bits (253), Expect = 6e-24
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 404 LKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKE 461
L ++ + + +W+I +L + E +G G+FG V G+W G +VA ++
Sbjct: 8 LLSARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDI 65
Query: 462 GTMSED---DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
+ED F E + +H+N+V G C + I+T
Sbjct: 66 ERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108
Score = 58.5 bits (142), Expect = 1e-09
Identities = 10/46 (21%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
+ +L + +R + L +V + ++ KGM YL +H+
Sbjct: 111 CKGRTLYSVVRDAKIVL--DVNKTRQIAQEIVKGMGYLHAKGILHK 154
Score = 53.5 bits (129), Expect = 6e-08
Identities = 10/49 (20%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
FS SDV+A G + +E+ + P+ ++ ++ G+ +
Sbjct: 220 FSKHSDVFALGTIWYELHA-REWPFKTQPAEAIIWQMGTGMKPNLSQIG 267
>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked
agammaglobulinemia, XLA, BTK, SH3 domain, transferase;
NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A
Length = 67
Score = 93.8 bits (234), Expect = 7e-24
Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
K VVALY + + DL L KG EY +++++ WW+ +DKNG GYIPSNYV E E
Sbjct: 9 KKVVALYDYMPMNANDLQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEAE 65
Score = 67.6 bits (166), Expect = 1e-14
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
K VVALY + + DL L KG EY +++++ WW+ +DKNG
Sbjct: 9 KKVVALYDYMPMNANDLQLRKGDEYFILEESNLPWWRARDKNG 51
>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR
{Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A
2k7a_A
Length = 77
Score = 94.0 bits (234), Expect = 7e-24
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 117 RKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSN 176
R+ Q +V+ALY ++ + +L+L EY ++D ++ HWW+V+DKNG GY PS+
Sbjct: 12 RRSFQEPEETLVIALYDYQTNDPQELALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSS 71
Query: 177 YVKEK 181
Y+ EK
Sbjct: 72 YLVEK 76
Score = 66.2 bits (162), Expect = 5e-14
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 66 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
Q +V+ALY ++ + +L+L EY ++D ++ HWW+V+DKNG
Sbjct: 14 SFQEPEETLVIALYDYQTNDPQELALRCDEEYYLLDSSEIHWWRVQDKNG 63
>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding
domain, protein tyrosine kinase, signal transduction,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 119
Score = 94.3 bits (235), Expect = 2e-23
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
G F+VR S S+ G ++SL + V HY I + G+ +++ + ++ E+V++
Sbjct: 36 INGSFLVRESESSPGQLSISLRYE---GRVYHYRINTTADGKVYVTAESRFSTLAELVHH 92
Query: 393 HRHNSGGLASRLKTSPC---DRPVPATA 417
H + GL + L P ++ P++
Sbjct: 93 HSTVADGLVTTLHY-PAPKCNKSGPSSG 119
Score = 88.5 bits (220), Expect = 2e-21
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
WY G +SR AE +L G F+VR S S+ G ++SL + V HY I + G
Sbjct: 18 WYHGPVSRSAAEYLLSSL-INGSFLVRESESSPGQLSISLRYE---GRVYHYRINTTADG 73
Query: 316 EFFLSEKHCCHSIPE 330
+ +++ + ++ E
Sbjct: 74 KVYVTAESRFSTLAE 88
>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain,
phosphotyrosine binding domain, protein tyrosine kinase,
signal transduction; NMR {Homo sapiens}
Length = 119
Score = 93.9 bits (234), Expect = 2e-23
Identities = 25/162 (15%), Positives = 47/162 (29%), Gaps = 58/162 (35%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
W G+++R +AE +L + K+G F+VR S S Y L + + V Y I N
Sbjct: 12 WNHGNITRSKAEELLSRTGKDGSFLVRASESISRAYALCVLYR---NCVYTYRILPNEDD 68
Query: 316 EFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEF 375
+F +
Sbjct: 69 KFTVQASEGVS------------------------------------------------- 79
Query: 376 FLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATA 417
+ +++ +++ + GL + L+ P T
Sbjct: 80 ----MRFFTKLDQLIEFYKKENMGLVTHLQY-PVPLEEEDTG 116
>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction,
peptide complex, complex (proto-oncogene/early protein);
HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F*
Length = 106
Score = 92.7 bits (231), Expect = 4e-23
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 333 DKEGCFVVRNS-STKGLYTLSLYTKVP--HPHVKHYHIKQNSRGEFFLSEKHCCHSIPEV 389
+ G F++R S +TKG Y+LS+ HVKHY I++ G ++++ + ++ ++
Sbjct: 26 NPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQL 85
Query: 390 VNYHRHNSGGLASRLKTSPCDR 411
V ++ + GL+SRL P +
Sbjct: 86 VQHYSERAAGLSSRL-VVPSHK 106
Score = 86.5 bits (215), Expect = 7e-21
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 257 WYVGDMSRQRAESILKQ-EDKEGCFVVRNS-STKGLYTLSLYTKVP--HPHVKHYHIKQN 312
WY G + R+ AE L + G F++R S +TKG Y+LS+ HVKHY I++
Sbjct: 7 WYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKL 66
Query: 313 SRGEFFLSEKHCCHSIPE 330
G ++++ + ++ +
Sbjct: 67 DNGGYYITTRAQFETLQQ 84
>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5-
triphosphate, wortmannin, H1047R, ATP-binding, disease
mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB:
3hiz_B 2rd0_B 4a55_B* 3mtt_A
Length = 373
Score = 99.5 bits (247), Expect = 5e-23
Identities = 34/183 (18%), Positives = 70/183 (38%), Gaps = 22/183 (12%)
Query: 334 KEGCFVVRNSSTK--GLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVN 391
+G F+VR++STK G YTL+L + K I G++ S+ S+ E++N
Sbjct: 30 ADGTFLVRDASTKMHGDYTLTLRKGG---NNKLIKIFH-RDGKYGFSDPLTFSSVVELIN 85
Query: 392 YHRHNS-----GGLASRLKTSPCDR----PVPATAGLSHDKWEIDPAELMLLEELGSGQF 442
++R+ S L +L P + V + ++ E + S ++
Sbjct: 86 HYRNESLAQYNPKLDVKLLY-PVSKYQQDQVVKEDNIEAVGKKLH--EYNTQFQEKSREY 142
Query: 443 GVVRRGKWRGSIDVAMMKE----GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIY 498
+ R S ++ M + + F E+ + R + + + ++
Sbjct: 143 DRLYEEYTRTSQEIQMKRTAIEAFNETIKIFEEQCQTQERYSKEYIEKFKREGNEKEIQR 202
Query: 499 IVT 501
I+
Sbjct: 203 IMH 205
Score = 80.3 bits (197), Expect = 1e-16
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 254 PKAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNS 313
K W VG +R +AE++L+ + ++G F+VR SS +G Y S+ V VKH I + +
Sbjct: 300 EKTWNVGSSNRNKAENLLRGK-RDGTFLVRESSKQGCYACSV---VVDGEVKHCVINKTA 355
Query: 314 RGEFFLSEKHCCHSIPE 330
G F + S+ E
Sbjct: 356 TGYGFAEPYNLYSSLKE 372
Score = 58.7 bits (141), Expect = 2e-09
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
++G F+VR SS +G Y S+ V VKH I + + G F + S+ E
Sbjct: 321 RDGTFLVRESSKQGCYACSV---VVDGEVKHCVINKTATGYGFAEPYNLYSSLKE 372
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 98.6 bits (246), Expect = 5e-23
Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 21/110 (19%)
Query: 413 VPATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----SIDVA--MMK 460
+ + G+S + I + L LG G+FG VR + + + VA M+K
Sbjct: 1 MLDSLGISDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLK 60
Query: 461 EGTMSED---DFIEEAKVMTRLQHQNLVQLYGVCSKHRP------IYIVT 501
++ +F+ EA M H ++ +L GV + R ++
Sbjct: 61 ADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVIL 110
Score = 84.3 bits (209), Expect = 5e-18
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
L ++ SDVWA+GV MWE+ T G+ PY ++N E+ + + G L++P
Sbjct: 211 LADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPP 262
Score = 65.0 bits (159), Expect = 9e-12
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 1 MRHGSLLNYLRRH---ENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
M+HG L +L EN + L+ + + GM YL N+IHR
Sbjct: 113 MKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHR 161
>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET:
PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A*
1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L*
1cwe_A*
Length = 105
Score = 90.8 bits (226), Expect = 3e-22
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 334 KEGCFVVRNS-STKGLYTLSLYT--KVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVV 390
G F++R S ST G ++LS+ + VKHY I+ G F++S + + E+V
Sbjct: 26 THGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELV 85
Query: 391 NYHRHNSGGLASRLKTSPC 409
++ + S GL +RL + PC
Sbjct: 86 RHYTNASDGLCTRL-SRPC 103
Score = 86.2 bits (214), Expect = 9e-21
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 257 WYVGDMSRQRAESILKQ-EDKEGCFVVRNS-STKGLYTLSLYT--KVPHPHVKHYHIKQN 312
W+ ++SR+ AE L + G F++R S ST G ++LS+ + VKHY I+
Sbjct: 6 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 65
Query: 313 SRGEFFLSEKHCCHSIPE 330
G F++S + + E
Sbjct: 66 DNGGFYISPRITFPGLHE 83
>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Mus musculus}
Length = 121
Score = 91.2 bits (227), Expect = 3e-22
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 333 DKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVN 391
++ G F++R S S KG ++LS+ + VKHY I++ G FFL+ + ++ E VN
Sbjct: 37 NQTGAFLIRESESQKGDFSLSVLDE---GVVKHYRIRRLDEGGFFLTRRKVFSTLNEFVN 93
Query: 392 YHRHNSGGLASRLKTSPCDRPVPAT 416
Y+ S GL +L PC + +
Sbjct: 94 YYTTTSDGLCVKL-EKPCLKIQVSG 117
Score = 84.6 bits (210), Expect = 6e-20
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 257 WYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
W+ G + R AE L E++ G F++R S S KG ++LS+ + VKHY I++
Sbjct: 18 WFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSVLDE---GVVKHYRIRRLDE 74
Query: 315 GEFFLSEKHCCHSIPE 330
G FFL+ + ++ E
Sbjct: 75 GGFFLTRRKVFSTLNE 90
>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR
{Homo sapiens} PDB: 2js2_A
Length = 67
Score = 89.2 bits (222), Expect = 3e-22
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 122 MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
M +V+A + + A + +L ++K ++DD+ + WW+V++ GY+PSNYV+ K
Sbjct: 1 MTEEVIVIAKWDYTAQQDQELDIKKNERLWLLDDS-KTWWRVRNAANRTGYVPSNYVERK 59
Query: 182 ELLGLQKY 189
+
Sbjct: 60 LEHHHHHH 67
Score = 62.3 bits (152), Expect = 9e-13
Identities = 11/47 (23%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 69 MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
M +V+A + + A + +L ++K ++DD+ + WW+V++
Sbjct: 1 MTEEVIVIAKWDYTAQQDQELDIKKNERLWLLDDS-KTWWRVRNAAN 46
>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex, immune
system; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB:
1ka7_A
Length = 128
Score = 91.3 bits (227), Expect = 3e-22
Identities = 22/177 (12%), Positives = 49/177 (27%), Gaps = 62/177 (35%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
Y G +SR+ E +L +G +++R+S S G+Y L + ++ Y + Q G
Sbjct: 6 VYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYH---GYIYTYRVSQTETG 62
Query: 316 EFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEF 375
+ +
Sbjct: 63 SWSAET----------------------------------------------APGVHKRY 76
Query: 376 FLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSH----DKWEIDP 428
F I +++ + G+ L+ P ++ A + + ++
Sbjct: 77 F-------RKIKNLISAFQKPDQGIVIPLQY-PVEKKSSARSTQGTTGIREDPDVCL 125
>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein
NCK2; T-cell receptor, SH3 domain, immunology, SH2
domain; NMR {Homo sapiens}
Length = 86
Score = 89.5 bits (222), Expect = 4e-22
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 118 KPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNY 177
K M +V+A + + A + +L ++K ++DD+ + WW+V++ GY+PSNY
Sbjct: 24 KNLHMTEEVIVIAKWDYTAQQDQELDIKKNERLWLLDDS-KTWWRVRNAANRTGYVPSNY 82
Query: 178 VKEK 181
V+ K
Sbjct: 83 VERK 86
Score = 65.2 bits (159), Expect = 1e-13
Identities = 13/74 (17%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 45 HRETKKSLYPS---SLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMD 101
H + + P+ + + ++ M +V+A + + A + +L ++K ++D
Sbjct: 1 HMKERPPPVPNPDYNSLKKGSLVKNLHMTEEVIVIAKWDYTAQQDQELDIKKNERLWLLD 60
Query: 102 DTQEHWWKVKDKNG 115
D+ + WW+V++
Sbjct: 61 DS-KTWWRVRNAAN 73
>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase,
phosphotransferase, phosphorylation; NMR {Mus musculus}
SCOP: d.93.1.1 PDB: 1blk_A
Length = 114
Score = 90.5 bits (225), Expect = 4e-22
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 333 DKEGCFVVRNS-STKGLYTLSLYTKVPH-PHVKHYHIKQNSRGEFFLSEKHCCHSIPEVV 390
+K G F++R S S KG ++LS+ VKHY I+ G +++S + ++ +V
Sbjct: 33 NKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLDNGGYYISPRITFPTLQALV 92
Query: 391 NYHRHNSGGLASRLKTSPCDRP 412
++ GL +L T PC
Sbjct: 93 QHYSKKGDGLCQKL-TLPCVNL 113
Score = 84.3 bits (209), Expect = 5e-20
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 257 WYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSLYTKVPH-PHVKHYHIKQNS 313
W+ +SR+ AE L +K G F++R S S KG ++LS+ VKHY I+
Sbjct: 14 WFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLD 73
Query: 314 RGEFFLSEKHCCHSIPE 330
G +++S + ++
Sbjct: 74 NGGYYISPRITFPTLQA 90
>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6
(PTK6/BRK), SRC homology 2(S domain, solution structure,
backbone dynamics, transferase; NMR {Homo sapiens} SCOP:
d.93.1.1
Length = 100
Score = 89.5 bits (223), Expect = 5e-22
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
G F++R S Y LS+ V+HY I + + G L+E S+PE+VNY
Sbjct: 24 ATGAFLIRVSEKPSADYVLSVRDT---QAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNY 80
Query: 393 HRHNSGGLASRLKTSPCDRP 412
HR S RL +PC +
Sbjct: 81 HRAQSLSHGLRL-AAPCRKH 99
Score = 84.5 bits (210), Expect = 4e-20
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 257 WYVGDMSRQRAESILKQED-KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
W+ G +SR A L+ E G F++R S Y LS+ V+HY I + +
Sbjct: 4 WFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDT---QAVRHYKIWRRAG 60
Query: 315 GEFFLSEKHCCHSIPE 330
G L+E S+PE
Sbjct: 61 GRLHLNEAVSFLSLPE 76
>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex
(phosphotransferase/receptor), phosphotransferase, SH2
domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1
PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A
Length = 112
Score = 90.1 bits (224), Expect = 5e-22
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE 316
W VG +R +AE++L+ + ++G F+VR SS +G Y S+ VKH I + + G
Sbjct: 12 WNVGSSNRNKAENLLRGK-RDGTFLVRESSKQGCYACSVVVD---GEVKHCVINKTATGY 67
Query: 317 FFLSEKHCCHSIPE 330
F + S+ E
Sbjct: 68 GFAEPYNLYSSLKE 81
Score = 85.0 bits (211), Expect = 3e-20
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 9/84 (10%)
Query: 334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYH 393
++G F+VR SS +G Y S+ VKH I + + G F + S+ E+V ++
Sbjct: 30 RDGTFLVRESSKQGCYACSVVVD---GEVKHCVINKTATGYGFAEPYNLYSSLKELVLHY 86
Query: 394 RHNS-----GGLASRLKTSPCDRP 412
+H S L L P
Sbjct: 87 QHTSLVQHNDSLNVTLAY-PVYAQ 109
>3maz_A Signal-transducing adaptor protein 1; modular domain,
phosphotyrosine, specificity, cytoplasm, phosphoprotein,
SH2 domain, signaling protein; HET: PTR; 1.90A {Homo
sapiens}
Length = 125
Score = 90.3 bits (224), Expect = 6e-22
Identities = 15/81 (18%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Query: 252 EKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQ 311
P +SR+ A +L++ G ++R S Y++++ ++ P +KHY +
Sbjct: 12 LNPMPACFYTVSRKEATEMLQKNPSLGNMILRPGSDSRNYSITIRQEIDIPRIKHYKVMS 71
Query: 312 NSRGE-FFLSEKHCCHSIPEV 331
+ L + ++ V
Sbjct: 72 VGQNYTIELEKPVTLPNLFSV 92
Score = 86.0 bits (213), Expect = 2e-20
Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 3/90 (3%)
Query: 334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE-FFLSEKHCCHSIPEVVNY 392
G ++R S Y++++ ++ P +KHY + + L + ++ V++Y
Sbjct: 36 SLGNMILRPGSDSRNYSITIRQEIDIPRIKHYKVMSVGQNYTIELEKPVTLPNLFSVIDY 95
Query: 393 HRHNSGGLASRL--KTSPCDRPVPATAGLS 420
+ G T P+ G S
Sbjct: 96 FVKETRGNLRPFIASTDENTGQEPSMEGRS 125
>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2;
SH2, phosphoinositide phospholipase C, PLC-gamma-2,
phospholipase C-gamma-2; NMR {Rattus norvegicus}
Length = 124
Score = 90.0 bits (224), Expect = 6e-22
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Query: 243 DRVQRGIILEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHP 302
D V E K WY +SR AE +L + ++G F++R Y ++ +
Sbjct: 8 DPVPNPNPHES-KPWYYDRLSRGEAEDMLMRIPRDGAFLIRKREGTDSYAITFRARG--- 63
Query: 303 HVKHYHIKQNSRGEFFLSEKHCCHSIPE 330
VKH I ++ R F L S+ E
Sbjct: 64 KVKHCRINRDGRH-FVLGTSAYFESLVE 90
Score = 85.4 bits (212), Expect = 3e-20
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 12/95 (12%)
Query: 332 KDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVN 391
++G F++R Y ++ + VKH I ++ R F L S+ E+V+
Sbjct: 38 IPRDGAFLIRKREGTDSYAITFRARG---KVKHCRINRDGRH-FVLGTSAYFESLVELVS 93
Query: 392 YHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEI 426
Y+ ++ RL+ PV +++
Sbjct: 94 YYEKHALYRKMRLR-----YPVTPE---LLERYSG 120
>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain,
signaling protein; NMR {Homo sapiens}
Length = 72
Score = 87.7 bits (218), Expect = 1e-21
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
VVVA + + A + +L ++K ++DD+ + WW+V++ G++PSNYV+ K
Sbjct: 8 VVVVAKFDYVAQQEQELDIKKNERLWLLDDS-KSWWRVRNSMNKTGFVPSNYVERKN 63
Score = 62.3 bits (152), Expect = 1e-12
Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
VVVA + + A + +L ++K ++DD+ + WW+V++
Sbjct: 8 VVVVAKFDYVAQQEQELDIKKNERLWLLDDS-KSWWRVRNSMN 49
>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine
kinase, signal transduction, peptide recognition,
signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1
PDB: 1d1z_A 1d4w_A* 1m27_A*
Length = 104
Score = 85.8 bits (213), Expect = 1e-20
Identities = 22/156 (14%), Positives = 44/156 (28%), Gaps = 58/156 (37%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
Y G +SR+ E +L +G +++R+S S G+Y L + ++ Y + Q G
Sbjct: 6 VYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYH---GYIYTYRVSQTETG 62
Query: 316 EFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEF 375
+ H
Sbjct: 63 SWSAETAPGVH------------------------------------------------- 73
Query: 376 FLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDR 411
K I +++ + G+ L+ P ++
Sbjct: 74 ----KRYFRKIKNLISAFQKPDQGIVIPLQY-PVEK 104
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 90.8 bits (226), Expect = 2e-20
Identities = 19/91 (20%), Positives = 34/91 (37%), Gaps = 11/91 (12%)
Query: 422 DKWEI--DPAELMLLEELGSGQFGVVRRGKWRG----SIDVA--MMKEGT--MSEDDFIE 471
I + +G G FGVV G++ I A + T + F+
Sbjct: 12 KDVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLR 71
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPI-YIVT 501
E +M L H N++ L G+ + +++
Sbjct: 72 EGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102
Score = 85.0 bits (211), Expect = 2e-18
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
L RF++KSDVW++GVL+WE+ T G PY + ++ + +G L +P
Sbjct: 200 LQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQP 250
Score = 73.1 bits (180), Expect = 2e-14
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
M HG LL ++R + V L+ +QV +GM YL ++HR
Sbjct: 105 MCHGDLLQFIRSPQRNP--TVKDLISFGLQVARGMEYLAEQKFVHR 148
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 90.0 bits (224), Expect = 2e-20
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSED---DFIEEAKVM 476
ID +L L +L G + +G+W+G+ D+ ++K S DF EE +
Sbjct: 3 KHSGIDFKQLNFLTKLNENHSGELWKGRWQGN-DIVVKVLKVRDWSTRKSRDFNEECPRL 61
Query: 477 TRLQHQNLVQLYGVCSK--HRPIYIVT 501
H N++ + G C ++T
Sbjct: 62 RIFSHPNVLPVLGACQSPPAPHPTLIT 88
Score = 50.7 bits (122), Expect = 3e-07
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRV 245
+D+W++ VL+WE+ T ++P+ L N E+ +V
Sbjct: 185 EDTNRRSADMWSFAVLLWELVT-REVPFADLSNMEIGMKV 223
Score = 43.8 bits (104), Expect = 6e-05
Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNY--IHR 46
M +GSL N L N + + + + + +GMA+L
Sbjct: 91 MPYGSLYNVLHEGTNFVV-DQSQAVKFALDMARGMAFLHTLEPLIPRH 137
>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70,
tyrosine kinase, transferase; HET: PTR; 1.90A {Homo
sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A
Length = 254
Score = 89.6 bits (222), Expect = 2e-20
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYH 393
+G F++R +G Y LSL V HY I Q+ G++ + E ++ ++V Y
Sbjct: 181 TDGKFLLRPRKEQGTYALSLIY---GKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEYL 237
Query: 394 RHNSGGLASRLKTSPCDRPVP 414
+ + GL LK P
Sbjct: 238 KLKADGLIYCLK-----EACP 253
Score = 88.4 bits (219), Expect = 7e-20
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 6/119 (5%)
Query: 214 DVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDMSRQRAESILKQ 273
V Y W++ + +V + P WY ++R+ AE L
Sbjct: 120 MVRDYVRQTWKLEGEALEQAIISQAPQVEKLIATTAHERMP--WYHSSLTREEAERKLYS 177
Query: 274 ED-KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEV 331
+G F++R +G Y LSL V HY I Q+ G++ + E ++ ++
Sbjct: 178 GAQTDGKFLLRPRKEQGTYALSLIY---GKTVYHYLISQDKAGKYCIPEGTKFDTLWQL 233
Score = 81.9 bits (202), Expect = 1e-17
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 257 WYVGDMSRQRAESILKQ-EDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
++ G +SR AE LK +G F++R + G Y LSL H+ I++
Sbjct: 8 FFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHD---VRFHHFPIERQLN 64
Query: 315 GEFFLSEKHCCHSIPEV 331
G + ++ E+
Sbjct: 65 GTYAIAGGKAHCGPAEL 81
Score = 76.5 bits (188), Expect = 7e-16
Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
+G F++R + G Y LSL H+ I++ G + ++ E+ +
Sbjct: 28 ADGLFLLRQCLRSLGGYVLSLVHD---VRFHHFPIERQLNGTYAIAGGKAHCGPAELCEF 84
Query: 393 HRHNSGGLASRL 404
+ + GL L
Sbjct: 85 YSRDPDGLPCNL 96
>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal
transduction, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens}
Length = 91
Score = 84.8 bits (210), Expect = 2e-20
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMD--DTQEHWWKVKDKNGSVGYIPSNYVKE 180
VV LYPF ++ +L+ EKG EV++ + WWK K+ G VG +P NYV
Sbjct: 18 HVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVV 74
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein;
SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 68
Score = 83.8 bits (208), Expect = 3e-20
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
K V LY F A +LS+ K EV++D WWK++ ++G GY+P N + E
Sbjct: 8 KYVKILYDFTARNANELSVLKDEVLEVLEDG-RQWWKLRSRSGQAGYVPCNILGE 61
Score = 60.0 bits (146), Expect = 6e-12
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
K V LY F A +LS+ K EV++D WWK++ ++G
Sbjct: 8 KYVKILYDFTARNANELSVLKDEVLEVLEDG-RQWWKLRSRSG 49
>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3,
protein-protein interaction, structural genomics; NMR
{Homo sapiens}
Length = 68
Score = 83.5 bits (207), Expect = 3e-20
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
+ LY F+A +L++ +G + EV+D + + WW VK++ G GYIPSN ++
Sbjct: 8 LKMQVLYEFEARNPRELTVVQGEKLEVLDHS-KRWWLVKNEAGRSGYIPSNILEP 61
Score = 60.0 bits (146), Expect = 7e-12
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
+ LY F+A +L++ +G + EV+D + + WW VK++ G
Sbjct: 8 LKMQVLYEFEARNPRELTVVQGEKLEVLDHS-KRWWLVKNEAG 49
>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain,
NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens}
SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B
Length = 193
Score = 87.7 bits (217), Expect = 3e-20
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 19/132 (14%)
Query: 66 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNGI------- 116
P+ +I A+ ++ G +++L G EV++ ++ WW + K G
Sbjct: 6 PEFIILQTYR-AIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLE 64
Query: 117 --------RKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 168
P+ + VA+ + A+EG ++SL +G EV+ + WW ++ K+
Sbjct: 65 PLDSPDETEDPEPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIR-KDD 123
Query: 169 SVGYIPSNYVKE 180
GY PS Y+++
Sbjct: 124 VTGYFPSMYLQK 135
>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal
transduction lymphocyte, signaling protein; HET: PTR;
2.15A {Mus musculus} SCOP: d.93.1.1
Length = 103
Score = 84.6 bits (210), Expect = 4e-20
Identities = 24/156 (15%), Positives = 47/156 (30%), Gaps = 58/156 (37%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
+Y G ++++ E++L + +G F++R+S S G L + K V Y I + G
Sbjct: 5 YYHGCLTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFK---KLVYSYRIFREKHG 61
Query: 316 EFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEF 375
+ + ++
Sbjct: 62 YYRIET----------------------------------------------DAHTPRTI 75
Query: 376 FLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDR 411
F ++ E+V+ + GL L P R
Sbjct: 76 F-------PNLQELVSKYGKPGQGLVVHLSN-PIMR 103
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP:
b.34.2.1
Length = 71
Score = 83.5 bits (207), Expect = 4e-20
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQE-HWWKVKDKNGSVGYIPSNYVKEKE 182
+A Y F DL KG ++ T++ +W+K K+K G G IP+NYV+++E
Sbjct: 14 CIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKRE 69
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 89.7 bits (223), Expect = 5e-20
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQH 481
ID E+ + E +G G FGVV + KWR DVA ++ + FI E + ++R+ H
Sbjct: 3 HMIDYKEIEVEEVVGRGAFGVVCKAKWRAK-DVAIKQIESESE-RKAFIVELRQLSRVNH 60
Query: 482 QNLVQLYGVCSKHRPIYIVT 501
N+V+LYG C P+ +V
Sbjct: 61 PNIVKLYGACLN--PVCLVM 78
Score = 52.7 bits (127), Expect = 1e-07
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE--VVDRVQRGIILEKPK 255
V + +S K DV+++G+++WEV T + P+ + ++ V G K
Sbjct: 174 VFEGSNYSEKCDVFSWGIILWEVIT-RRKPFDEIGGPAFRIMWAVHNGTRPPLIK 227
Score = 46.6 bits (111), Expect = 9e-06
Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNY---IHR 46
GSL N L E + C+Q +G+AYL IHR
Sbjct: 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 129
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm,
SH3 domain, signaling protein; NMR {Homo sapiens} PDB:
2rol_A
Length = 68
Score = 83.1 bits (206), Expect = 5e-20
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 119 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
P K V+ Y F+A +LS+++ EV+DD+ WWKV+D G GY+P N +
Sbjct: 2 PLGSGALKWVLCNYDFQARNSSELSVKQRDVLEVLDDS-RKWWKVRDPAGQEGYVPYNIL 60
Query: 179 K 179
Sbjct: 61 T 61
Score = 60.8 bits (148), Expect = 3e-12
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 66 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
P K V+ Y F+A +LS+++ EV+DD+ WWKV+D G
Sbjct: 2 PLGSGALKWVLCNYDFQARNSSELSVKQRDVLEVLDDS-RKWWKVRDPAG 50
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel,
transferase; HET: PG4; 1.76A {Homo sapiens} PDB: 3h0i_A
3h0f_A*
Length = 73
Score = 83.1 bits (206), Expect = 5e-20
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 114 NGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGY 172
G + + VALY ++AI DLS KG ++++++ ++ WW+ + G GY
Sbjct: 4 TGTLRTRGGTGVTLFVALYDYEAITEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGY 63
Query: 173 IPSNYVKEKE 182
IPSNYV +
Sbjct: 64 IPSNYVAPVD 73
>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}
Length = 68
Score = 82.7 bits (205), Expect = 7e-20
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
+ +A+ F A + GDL+ +KG V++ + WW KD G+ G +P Y++
Sbjct: 11 EEYIAVGDFTAQQVGDLTFKKGEILLVIEKKPDGWWIAKDAKGNEGLVPRTYLEPYS 67
Score = 59.2 bits (144), Expect = 1e-11
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
+ +A+ F A + GDL+ +KG V++ + WW KD G
Sbjct: 11 EEYIAVGDFTAQQVGDLTFKKGEILLVIEKKPDGWWIAKDAKG 53
>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain;
HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1
PDB: 1csy_A* 1csz_A*
Length = 254
Score = 88.0 bits (218), Expect = 8e-20
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYH 393
G F++R G Y L L + V HY I ++ G+ + E ++ ++V ++
Sbjct: 180 TNGKFLIRARDNNGSYALCLLHE---GKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHY 236
Query: 394 RHNSGGLASRLKTSPCDR 411
+ + GL L T PC +
Sbjct: 237 SYKADGLLRVL-TVPCQK 253
Score = 83.0 bits (205), Expect = 4e-18
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 257 WYVGDMSRQRAESILKQEDKE-GCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
W+ G +SR+ +E I+ K G F++R G Y L L + V HY I ++ G
Sbjct: 160 WFHGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLHE---GKVLHYRIDKDKTG 216
Query: 316 EFFLSEKHCCHSIPE 330
+ + E ++ +
Sbjct: 217 KLSIPEGKKFDTLWQ 231
Score = 81.9 bits (202), Expect = 9e-18
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 257 WYVGDMSRQRAESILKQED-KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
++ G+++R+ AE L Q +G +++R S + G + LS+ HY I++
Sbjct: 7 FFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGR---KAHHYTIERELN 63
Query: 315 GEFFLSEKHCCHSIPE 330
G + ++ S +
Sbjct: 64 GTYAIAGGRTHASPAD 79
Score = 79.2 bits (195), Expect = 8e-17
Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 4/89 (4%)
Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
+G +++R S + G + LS+ HY I++ G + ++ S ++ +Y
Sbjct: 27 SDGLYLLRQSRNYLGGFALSVAHGR---KAHHYTIERELNGTYAIAGGRTHASPADLCHY 83
Query: 393 HRHNSGGLASRLKTSPCDRPVPATAGLSH 421
H S GL LK
Sbjct: 84 HSQESDGLVCLLKKPFNRPQGVQPKTGPF 112
>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel,
beta sheet, zinc finger, metal binding protein; NMR
{Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A
Length = 71
Score = 82.3 bits (204), Expect = 8e-20
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMD--DTQEHWWKVKDKNGSVGYIPSNYVKE 180
VV LYPF ++ +L+ EKG EV++ + WWK K+ G VG +P NYV
Sbjct: 7 HVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVV 63
>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine
kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A
4hck_A 5hck_A
Length = 86
Score = 82.5 bits (204), Expect = 1e-19
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 119 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNY 177
+ +VVALY ++AI DLS +KG + V++++ E WWK + GYIPSNY
Sbjct: 19 REAGSEDIIVVALYDYEAIHHEDLSFQKGDQMVVLEESGE-WWKARSLATRKEGYIPSNY 77
Query: 178 VKEKELL 184
V + L
Sbjct: 78 VARVDSL 84
>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase,
phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus
musculus}
Length = 302
Score = 87.8 bits (217), Expect = 2e-19
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE 316
WYVG ++R +AE +L + ++G F++R SS +G Y S+ KH I + + G
Sbjct: 196 WYVGKINRTQAEEMLSGK-RDGTFLIRESSQRGCYACSVVVD---GDTKHCVIYRTATGF 251
Query: 317 FFLSEKHCCHSIPE 330
F + S+ E
Sbjct: 252 GFAEPYNLYGSLKE 265
Score = 87.0 bits (215), Expect = 4e-19
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 9/92 (9%)
Query: 334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYH 393
++G F++R SS +G Y S+ KH I + + G F + S+ E+V ++
Sbjct: 214 RDGTFLIRESSQRGCYACSVVVD---GDTKHCVIYRTATGFGFAEPYNLYGSLKELVLHY 270
Query: 394 RHNS-----GGLASRLKTSPCDRPVPATAGLS 420
+H S L L P P P +
Sbjct: 271 QHASLVQHNDALTVTLAH-PVRAPGPGPPSAA 301
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 87.3 bits (217), Expect = 3e-19
Identities = 20/92 (21%), Positives = 32/92 (34%), Gaps = 9/92 (9%)
Query: 419 LSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG----SIDVA--MMKEGTMSED--DFI 470
+ H + E +G G FG V G I A + T + F+
Sbjct: 15 VQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFL 74
Query: 471 EEAKVMTRLQHQNLVQLYGVCSKHR-PIYIVT 501
E +M H N++ L G+C + +V
Sbjct: 75 TEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 106
Score = 82.7 bits (205), Expect = 1e-17
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
L +F++KSDVW++GVL+WE+ T G PY + ++ + +G L +P
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 254
Score = 68.8 bits (169), Expect = 4e-13
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
M+HG L N++R + V L+ +QV KGM YL ++HR
Sbjct: 109 MKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKYLASKKFVHR 152
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 87.9 bits (218), Expect = 4e-19
Identities = 20/92 (21%), Positives = 32/92 (34%), Gaps = 9/92 (9%)
Query: 419 LSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG----SIDVA--MMKEGTMSED--DFI 470
+ H + E +G G FG V G I A + T + F+
Sbjct: 79 VQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFL 138
Query: 471 EEAKVMTRLQHQNLVQLYGVCSKHR-PIYIVT 501
E +M H N++ L G+C + +V
Sbjct: 139 TEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170
Score = 82.1 bits (203), Expect = 4e-17
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
L +F++KSDVW++GVL+WE+ T G PY + ++ + +G L +P
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 318
Score = 69.0 bits (169), Expect = 8e-13
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
M+HG L N++R + V L+ +QV KGM +L ++HR
Sbjct: 173 MKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKFLASKKFVHR 216
>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched
library, clone:9530076O17...; SH3_1 domain; NMR {Mus
musculus}
Length = 109
Score = 81.4 bits (201), Expect = 5e-19
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKEKE 182
+ VALY ++A DLS +KG ++++++T+ WW+ + G GYIPSNYV +
Sbjct: 26 GVTIFVALYDYEARTTEDLSFKKGERFQIINNTEGDWWEARSIATGKSGYIPSNYVVPAD 85
Query: 183 LLGLQKY 189
+ +++
Sbjct: 86 SIQAEEW 92
Score = 33.2 bits (76), Expect = 0.041
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 253 KPKAWYVGDMSRQRAESILKQ 273
+ + WY G M R+ AES
Sbjct: 88 QAEEWYFGKMGRKDAESGPSS 108
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Mus musculus}
Length = 77
Score = 80.2 bits (198), Expect = 6e-19
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDK--------NGSVGYIPSNY 177
+ VAL+ ++A DLS G + +V+D + E WW + GYIPSNY
Sbjct: 8 QYFVALFDYQARTAEDLSFRAGDKLQVLDTSHEGWWLARHLEKKGTGLGQQLQGYIPSNY 67
Query: 178 VKEKE 182
V E
Sbjct: 68 VAEDS 72
>1i07_A Epidermal growth factor receptor kinase substrate EPS8;
hormone/growth factor; 1.80A {Mus musculus} SCOP:
b.34.2.1 PDB: 1aoj_A 1i0c_A
Length = 60
Score = 79.6 bits (197), Expect = 7e-19
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
K + Y F A +LS+ K E++DD WWKV++ +G G++P+N +
Sbjct: 2 KYAKSKYDFVARNSSELSVMKDDVLEILDDR-RQWWKVRNASGDSGFVPNNILD 54
Score = 57.6 bits (140), Expect = 3e-11
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
K + Y F A +LS+ K E++DD WWKV++ +G
Sbjct: 2 KYAKSKYDFVARNSSELSVMKDDVLEILDDR-RQWWKVRNASG 43
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide);
1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A
1m30_A 1m3b_A 1m3a_A
Length = 57
Score = 79.1 bits (196), Expect = 8e-19
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
+ V AL+ F + DL +KG + D +E WW +D G G IP YV++
Sbjct: 2 EYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK 56
Score = 56.0 bits (136), Expect = 1e-10
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
+ V AL+ F + DL +KG + D +E WW +D G
Sbjct: 2 EYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEG 44
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 85.4 bits (212), Expect = 9e-19
Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 13/93 (13%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS-IDVA--MMKEGTMSED--------D 468
+ E+ +++G G FG+V +G+ VA + G + +
Sbjct: 10 KSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQE 69
Query: 469 FIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
F E +M+ L H N+V+LYG+ P +V
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHN--PPRMVM 100
Score = 48.1 bits (115), Expect = 3e-06
Identities = 9/48 (18%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNY--IHR 46
+ G L + L + + + L + + + G+ Y++ N +HR
Sbjct: 103 VPCGDLYHRLLDKAHPI--KWSVKLRLMLDIALGIEYMQNQNPPIVHR 148
Score = 46.9 bits (112), Expect = 7e-06
Identities = 5/34 (14%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 208 RFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV 241
++ K+D +++ ++++ + T G+ P+ ++
Sbjct: 204 SYTEKADTYSFAMILYTILT-GEGPFDEYSYGKI 236
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel,
ATP-binding, developmental protein, lipoprotein,
manganese, metal-binding; 1.60A {Gallus gallus} PDB:
2l2p_A
Length = 79
Score = 79.3 bits (196), Expect = 1e-18
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKEKE 182
+ ALY ++A DLS KG ++++++ ++ WW+ + G GYIPS Y+ +
Sbjct: 5 STLFEALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSIYLAPVD 63
>2eo6_A B-cell linker protein; SH2, cytoplasmic adapter protein, B-cell
adapter containing SH2 domain protein; NMR {Mus
musculus}
Length = 141
Score = 81.5 bits (201), Expect = 1e-18
Identities = 33/173 (19%), Positives = 51/173 (29%), Gaps = 68/173 (39%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK---GLYTLSLYTKVPHPHVKHYHIKQNS 313
WY G R+ AE L + +K+G F++R SS YTL + V + ++
Sbjct: 25 WYAGACDRKSAEEALHRSNKDGSFLIRKSSGHDSKQPYTLVAFFN---KRVYNIPVRFIE 81
Query: 314 RGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRG 373
K Y + + G
Sbjct: 82 AT-----------------------------------------------KQYALGKKKNG 94
Query: 374 EFFLSEKHCCHSIPEVVNYHRHNSGGLAS---------RLKTSPCDRPVPATA 417
E S+ E+VN H+HN L RLK + P++
Sbjct: 95 E------EYFGSVVEIVNSHQHNPLVLIDSQNNTKDSTRLKYAVKVSSGPSSG 141
Score = 27.5 bits (61), Expect = 6.5
Identities = 5/18 (27%), Positives = 9/18 (50%)
Query: 167 NGSVGYIPSNYVKEKELL 184
+GS G S + ++ L
Sbjct: 3 SGSSGPFNSTFADQEAEL 20
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling
protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1
PDB: 1h92_A 1kik_A
Length = 62
Score = 78.5 bits (194), Expect = 1e-18
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 123 IRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKE 180
++ +V+AL+ ++ GDL EKG + +++ + E WWK + G G+IP N+V +
Sbjct: 4 LQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGE-WWKAQSLTTGQEGFIPFNFVAK 61
>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine
proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C*
4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 1fyn_A
1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C*
1qwe_A 1qwf_A 1prl_C ...
Length = 84
Score = 79.0 bits (195), Expect = 2e-18
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKEKE 182
+ VALY + A DLS KG ++++++ WW+ + G GYIPSNYV +
Sbjct: 7 TLFVALYDYNATRWTDLSFHKGEKFQILEFGPGDWWEARSLTTGETGYIPSNYVAPVD 64
>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling
protein; 2.01A {Caenorhabditis elegans}
Length = 174
Score = 81.4 bits (200), Expect = 3e-18
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 119 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
+ +VVV + F DL E+G E++ T + WW+ ++ G+ G +P+NYV
Sbjct: 112 AYKKPIIEVVVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYV 171
Query: 179 KEK 181
+ +
Sbjct: 172 QIQ 174
Score = 71.0 bits (173), Expect = 1e-14
Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 7/114 (6%)
Query: 255 KAWYVGDMSRQRAESILKQ-EDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNS 313
+++Y MSR+ A +L + + G F++R+SS G Y+L++ V HY I++
Sbjct: 12 RSFYFPGMSREEAHKLLGEPQVSIGTFLMRDSSRPGEYSLTVREADEGNAVCHYLIERGE 71
Query: 314 RGE------FFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPH 361
E IP + + V+ +S Y + V
Sbjct: 72 PKEDGTAAAGVKIANQSFPDIPALLNHFKMRVLTEASLLAAYKKPIIEVVVGTF 125
Score = 56.3 bits (135), Expect = 1e-09
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 66 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
+ +VVV + F DL E+G E++ T + WW+ ++ G
Sbjct: 112 AYKKPIIEVVVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALG 161
Score = 52.1 bits (124), Expect = 5e-08
Identities = 19/101 (18%), Positives = 31/101 (30%), Gaps = 6/101 (5%)
Query: 333 DKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE------FFLSEKHCCHSI 386
G F++R+SS G Y+L++ V HY I++ E I
Sbjct: 33 VSIGTFLMRDSSRPGEYSLTVREADEGNAVCHYLIERGEPKEDGTAAAGVKIANQSFPDI 92
Query: 387 PEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEID 427
P ++N+ + AS L
Sbjct: 93 PALLNHFKMRVLTEASLLAAYKKPIIEVVVGTFKFTGERET 133
>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain,
protein protein interactions, PTR residues, HYDR peptide
complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A*
1aya_A* 1ayb_A* 1ayc_A* 1ayd_A
Length = 109
Score = 78.9 bits (195), Expect = 4e-18
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNS 313
+ W+ +++ AE++L +G F+ R S S G +TLS+ V H I+
Sbjct: 7 RRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRN---GAVTHIKIQNTG 63
Query: 314 RGEFFLSEKHCCHSIPE 330
+ L ++ E
Sbjct: 64 DY-YDLYGGEKFATLAE 79
Score = 68.1 bits (167), Expect = 3e-14
Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 16/88 (18%)
Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
+G F+ R S S G +TLS+ V H I+ + L ++ E+V Y
Sbjct: 28 VDGSFLARPSKSNPGDFTLSVRRN---GAVTHIKIQNTGDY-YDLYGGEKFATLAELVQY 83
Query: 393 HRHNSG------GLASRLKTSPCDRPVP 414
+ + G G LK P+
Sbjct: 84 YMEHHGQLKEKNGDVIELK-----YPLN 106
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors,
peptoids, protein-protein recognition, proline-rich
motifs, signal transduction; 2.50A {Mus musculus} SCOP:
b.34.2.1
Length = 65
Score = 76.9 bits (190), Expect = 6e-18
Identities = 19/57 (33%), Positives = 28/57 (49%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
+ V AL+ F + DL +KG + D +E WW +D G G IP YV++
Sbjct: 4 EYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYH 60
Score = 54.5 bits (132), Expect = 4e-10
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
+ V AL+ F + DL +KG + D +E WW +D G
Sbjct: 4 EYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEG 46
>1w1f_A Tyrosine-protein kinase LYN; SH3-domain, SH3 domain, tyrosine
kinase, signal transduction; NMR {Homo sapiens} PDB:
1wa7_A
Length = 65
Score = 76.9 bits (190), Expect = 6e-18
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKEKE 182
+ +VVALYP+ I DLS +KG + +V+++ E WWK K G+IPSNYV +
Sbjct: 6 QGDIVVALYPYDGIHPDDLSFKKGEKMKVLEEHGE-WWKAKSLLTKKEGFIPSNYVAKLN 64
>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit;
transferase, polymorphism, UBL conjugation,
phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo
sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A
1oo4_A* 2pna_A 2pnb_A
Length = 120
Score = 78.9 bits (195), Expect = 6e-18
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK--GLYTLSLYTKVPHPHVKHYHIKQNSR 314
WY GD+SR+ L+ +G F+VR++STK G YTL+L + K I
Sbjct: 13 WYWGDISREEVNEKLRDT-ADGTFLVRDASTKMHGDYTLTLRKGG---NNKLIKIFH-RD 67
Query: 315 GEFFLSEKHCCHSIPE 330
G++ S+ S+ E
Sbjct: 68 GKYGFSDPLTFSSVVE 83
Score = 73.9 bits (182), Expect = 4e-16
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 12/91 (13%)
Query: 334 KEGCFVVRNSSTK--GLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVN 391
+G F+VR++STK G YTL+L + K I G++ S+ S+ E++N
Sbjct: 31 ADGTFLVRDASTKMHGDYTLTLRKGG---NNKLIKIFH-RDGKYGFSDPLTFSSVVELIN 86
Query: 392 YHRHNS-----GGLASRLKTSPCDRPVPATA 417
++R+ S L +L P +
Sbjct: 87 HYRNESLAQYNPKLDVKLLY-PVSKYQQDQV 116
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural
protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Length = 65
Score = 75.5 bits (186), Expect = 2e-17
Identities = 16/64 (25%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK-------DKNGSVGYIPSNYV 178
++V+ALY ++ +++++KG +++ T + WWKV+ G++P+ YV
Sbjct: 2 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVKITVNGKTYERQGFVPAAYV 61
Query: 179 KEKE 182
K+ +
Sbjct: 62 KKLD 65
>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1,
solution structure, cell junctio membrane, hydrolase,
membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A
Length = 131
Score = 77.6 bits (191), Expect = 2e-17
Identities = 28/154 (18%), Positives = 50/154 (32%), Gaps = 50/154 (32%)
Query: 255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNS 313
K WY +SR +A ++LK + G F++R+S S +G Y L+L P P + +
Sbjct: 20 KFWYKPHLSRDQAIALLKDK-DPGAFLIRDSHSFQGAYGLALKVATPPPSAQPWKGDPVE 78
Query: 314 RGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRG 373
V+H+ I+ +G
Sbjct: 79 ----------------------------------------------QLVRHFLIETGPKG 92
Query: 374 EFF--LSEKHCCHSIPEVVNYHRHNSGGLASRLK 405
+ S+ +V+ H + L L+
Sbjct: 93 VKIKGCPSEPYFGSLSALVSQHSISPISLPCCLR 126
>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding,
signaling, HCK SH3 domain, PR binding; 3.45A {Homo
sapiens}
Length = 90
Score = 76.3 bits (188), Expect = 2e-17
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKEKELL 184
+VVALY + + DLS +KG + V++++ E WWK + GYIPSNYV +
Sbjct: 4 IIVVALYDYVSWSPDDLSFQKGDQMVVLEESGE-WWKARSLATRKEGYIPSNYVARVDSG 62
Query: 185 GLQKY 189
G
Sbjct: 63 GGTSG 67
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 82.7 bits (204), Expect = 3e-17
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 12/92 (13%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIE 471
KWE L L + LG G FG V G ++ V M+KEG + +
Sbjct: 15 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 74
Query: 472 EAKVMTRL-QHQNLVQLYGVCSKH-RPIYIVT 501
E K++ + H N+V L G C+K P+ ++
Sbjct: 75 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 106
Score = 70.7 bits (173), Expect = 2e-13
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKPK 255
+ ++ +SDVW++GVL+WE+F+ G PY G + E R++ G + P
Sbjct: 267 IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 319
Score = 38.4 bits (89), Expect = 0.005
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 24 LLDMCIQVCKGMAYLERHNYIHR 46
L+ QV KGM +L IHR
Sbjct: 195 LICYSFQVAKGMEFLASRKCIHR 217
>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
d.93.1.1
Length = 119
Score = 77.0 bits (190), Expect = 3e-17
Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Query: 334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFL-SEKHCCHSIPEVVNY 392
G F++R S + YTLS + H+ +K G F + EK S+ +V +
Sbjct: 36 PLGSFLIRVSHSHVGYTLSYKAQS---SCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTF 92
Query: 393 HRHNSGGLASRLKTSPCDRPVPATA 417
H+ L T PC + +
Sbjct: 93 HQQKPIEPRRELLTQPCRQKDSGPS 117
Score = 76.6 bits (189), Expect = 3e-17
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE 316
W+ G +SR+ AE++L+ G F++R S + YTLS + H+ +K G
Sbjct: 18 WFHGAISREDAENLLES-QPLGSFLIRVSHSHVGYTLSYKAQS---SCCHFMVKLLDDGT 73
Query: 317 FFL-SEKHCCHSIPE 330
F + EK S+
Sbjct: 74 FMIPGEKVAHTSLDA 88
>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3
domain, structural genomics center for structural
genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A*
1x27_A*
Length = 175
Score = 77.0 bits (189), Expect = 1e-16
Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 13/155 (8%)
Query: 260 GDMSRQRAESILKQEDKEGCFVVRNSSTK--GLYTLSLYTKVPHPHVKHYHIKQNSRGEF 317
GD+ ++ E + E + ++ +T G + K + + K SR +
Sbjct: 27 GDLGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVAKANSLEPEPWFFKNLSRKD- 85
Query: 318 FLSEKHCCHSIPEVKDKEGCFVVRNS-STKGLYTLSLYT--KVPHPHVKHYHIKQNSRGE 374
+ + G F++R S ST G ++LS+ + VKHY I+ G
Sbjct: 86 ------AERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGG 139
Query: 375 FFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPC 409
F++S + + E+V ++ + S GL +RL PC
Sbjct: 140 FYISPRITFPGLHELVRHYTNASDGLCTRLSR-PC 173
Score = 61.6 bits (149), Expect = 3e-11
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 254 PKAWYVGDMSRQRAESILKQ-EDKEGCFVVRNS-STKGLYTLSLYT--KVPHPHVKHYHI 309
P+ W+ ++SR+ AE L + G F++R S ST G ++LS+ + VKHY I
Sbjct: 73 PEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKI 132
Query: 310 KQNSRGEFFLSEKHCCHSIPE 330
+ G F++S + + E
Sbjct: 133 RNLDNGGFYISPRITFPGLHE 153
Score = 57.8 bits (139), Expect = 5e-10
Identities = 20/70 (28%), Positives = 35/70 (50%)
Query: 115 GIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIP 174
G P ++ +V+AL+ ++ GDL EKG + +++ + E W G G+IP
Sbjct: 2 GSNPPASPLQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIP 61
Query: 175 SNYVKEKELL 184
N+V + L
Sbjct: 62 FNFVAKANSL 71
Score = 48.1 bits (114), Expect = 9e-07
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 66 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
P ++ +V+AL+ ++ GDL EKG + +++ + E W G
Sbjct: 6 PASPLQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGEWWKAQSLTTG 55
>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 79
Score = 74.0 bits (182), Expect = 1e-16
Identities = 12/65 (18%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Query: 119 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNY 177
+ + + L + + + +G + V+ D WWK G YIP
Sbjct: 11 NPEGLDSDFLAVLSDYPSPDISPPIFRRGEKLRVISDEGG-WWKAISLSTGRESYIPGIC 69
Query: 178 VKEKE 182
V
Sbjct: 70 VARVS 74
>1jyr_A Growth factor receptor-bound protein 2; receptor binding,
regulatory, inhibitor, signaling protein-I complex; HET:
PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A*
1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E*
1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A*
Length = 96
Score = 74.1 bits (183), Expect = 2e-16
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
W+ G + R +AE +L ++ +G F++R S S G ++LS+ V+H+ + ++ G
Sbjct: 5 WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGN---DVQHFKVLRDGAG 61
Query: 316 EFFLSEKHCCHSIPE 330
+ +S+ E
Sbjct: 62 -KYFLWVVKFNSLNE 75
Score = 64.9 bits (159), Expect = 2e-13
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
+G F++R S S G ++LS+ V+H+ + ++ G + +S+ E+V+Y
Sbjct: 24 HDGAFLIRESESAPGDFSLSVKFGN---DVQHFKVLRDGAG-KYFLWVVKFNSLNELVDY 79
Query: 393 HRHNSGGLASRL 404
HR S ++
Sbjct: 80 HRSTSVSRNQQI 91
>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced,
ATP-binding, cell membrane, cytoplasm, membrane,
nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens}
PDB: 3eac_A
Length = 106
Score = 73.8 bits (182), Expect = 2e-16
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
+ G F+VR S + G YTL + + V+HY I ++ + + E+ ++ ++V +
Sbjct: 28 ETGLFLVRESTNYPGDYTLCVSSD---GKVEHYRIMYHA-SKLSIDEEVYFENLMQLVEH 83
Query: 393 HRHNSGGLASRLKTSPCDRP 412
+ ++ GL +RL P
Sbjct: 84 YTSDADGLCTRL-IKPKVME 102
Score = 70.3 bits (173), Expect = 3e-15
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
W+ G ++R++AE +L + G F+VR S + G YTL + + V+HY I ++
Sbjct: 10 WFHGKITREQAERLLYPP-ETGLFLVRESTNYPGDYTLCVSSD---GKVEHYRIMYHA-S 64
Query: 316 EFFLSEKHCCHSIPE 330
+ + E+ ++ +
Sbjct: 65 KLSIDEEVYFENLMQ 79
>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain,
phosphotyrosine binding, signaling protein, signaling
protein-antagonist complex; HET: PTR; 1.60A {Homo
sapiens} PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A*
3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A*
2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A*
1fyr_A* ...
Length = 117
Score = 74.2 bits (183), Expect = 2e-16
Identities = 20/92 (21%), Positives = 38/92 (41%), Gaps = 6/92 (6%)
Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
+G F++R S S G ++LS+ V+H+ + ++ G + +S+ E+V+Y
Sbjct: 27 HDGAFLIRESESAPGDFSLSVKFG---NDVQHFKVLRDGAG-KYFLWVVKFNSLNELVDY 82
Query: 393 HRHNSGGLASRLKTSPCDRPVPATAGLSHDKW 424
HR S ++ VP
Sbjct: 83 HRSTSVSRNQQIFL-RDIEQVPQQPTYVQAHH 113
Score = 73.5 bits (181), Expect = 4e-16
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
W+ G + R +AE +L ++ +G F++R S S G ++LS+ V+H+ + ++ G
Sbjct: 8 WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKF---GNDVQHFKVLRDGAG 64
Query: 316 EFFLSEKHCCHSIPE 330
+ +S+ E
Sbjct: 65 -KYFLWVVKFNSLNE 78
>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 78
Score = 72.8 bits (179), Expect = 2e-16
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDT-QEHWWKVKDKNGSVGYIPSNYVK 179
P +Y +KA + +L++E+ EV++D E W K ++K G VGY+P Y++
Sbjct: 13 PLTCKVVYSYKASQPDELTIEEHEVLEVIEDGDMEDWVKARNKVGQVGYVPEKYLQ 68
>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator,
P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 119
Score = 73.9 bits (182), Expect = 3e-16
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNS 313
K W+ G +S+Q A ++L + F+VR S +T G Y+L T + +++ + I
Sbjct: 16 KIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRT---NENIQRFKICPTP 72
Query: 314 RGEFFLSEKHCCHSIPEV 331
+F + +SI ++
Sbjct: 73 NNQFMMGG-RYYNSIGDI 89
Score = 70.4 bits (173), Expect = 5e-15
Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
+ F+VR S +T G Y+L T + +++ + I +F + +SI +++++
Sbjct: 37 QVCSFLVRPSDNTPGDYSLYFRT---NENIQRFKICPTPNNQFMMGG-RYYNSIGDIIDH 92
Query: 393 HRHNSGGLASRLKTSPC---DRPVPATA 417
+R LK P D+ P++
Sbjct: 93 YRKEQIVEGYYLKE-PVPMQDQSGPSSG 119
>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein
10, SH3 domain, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 70
Score = 71.1 bits (175), Expect = 7e-16
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVM-DDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
VA+Y F+ G +S+ +G + +M +D + W +V+ K G GY+P++Y++
Sbjct: 8 GHCVAIYHFEGSSEGTISMAEGEDLSLMEEDKGDGWTRVRRKEGGEGYVPTSYLRVTS 65
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding,
cell adhesion, cytoskeleton, LIPO magnesium, manganese,
metal-binding, myristate; 1.40A {Homo sapiens} PDB:
3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A
1bbz_A 1awo_A
Length = 63
Score = 71.1 bits (175), Expect = 7e-16
Identities = 17/58 (29%), Positives = 24/58 (41%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
P + VALY F A LS+ KG + V+ W G++PS Y+
Sbjct: 5 PNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSAYITPVN 62
>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2
domain, signaling protein; 2.30A {Homo sapiens}
Length = 126
Score = 72.8 bits (179), Expect = 9e-16
Identities = 25/165 (15%), Positives = 52/165 (31%), Gaps = 60/165 (36%)
Query: 249 IILEKPKAWYVGDMSRQRAESILKQED-KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKH 306
++ + + W+ +SR A+ ++ Q+ +G F+VR+S S + LS+ +KH
Sbjct: 20 HMIHRSQPWFHHKISRDEAQRLIIQQGLVDGVFLVRDSQSNPKTFVLSMSH---GQKIKH 76
Query: 307 YHIKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYH 366
+ I + + H +
Sbjct: 77 FQIIPVEDDGEM-----------------------------------FHTLDDGHTR--- 98
Query: 367 IKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDR 411
+ ++V +++ N G L +LK C R
Sbjct: 99 ----------------FTDLIQLVEFYQLNKGVLPCKLKH-YCAR 126
Score = 26.9 bits (60), Expect = 9.2
Identities = 3/17 (17%), Positives = 5/17 (29%)
Query: 166 KNGSVGYIPSNYVKEKE 182
+ S G +P
Sbjct: 8 HHHSSGLVPRGSHMIHR 24
>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling
protein; 2.52A {Caenorhabditis elegans}
Length = 308
Score = 76.0 bits (186), Expect = 2e-15
Identities = 26/169 (15%), Positives = 50/169 (29%), Gaps = 50/169 (29%)
Query: 61 SFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG----- 115
+ +L + +VVV + F DL E+G E++ T + WW+ ++ G
Sbjct: 136 ASLLAAYKKPIIEVVVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALGTTGLV 195
Query: 116 --------------------------------------------IRKPDQMIRPKVVVAL 131
I ++ V
Sbjct: 196 PANYVQIQMEFHNDRTSKGASQSSIGSSGGGAERFSSASTSSDNIELQPRLPAKAKVTFD 255
Query: 132 YPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
A + L ++KG V +K + +G +G +P Y++
Sbjct: 256 RVPNAYDPTQLRVKKGQTVLVTQKMSNGMYKAE-LDGQIGSVPHTYLRF 303
Score = 74.5 bits (182), Expect = 6e-15
Identities = 18/69 (26%), Positives = 34/69 (49%)
Query: 112 DKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVG 171
+ + + +VVV + F DL E+G E++ T + WW+ ++ G+ G
Sbjct: 134 TEASLLAAYKKPIIEVVVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALGTTG 193
Query: 172 YIPSNYVKE 180
+P+NYV+
Sbjct: 194 LVPANYVQI 202
Score = 57.5 bits (138), Expect = 3e-09
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 252 EKPKAWYVGDMSRQRAESILKQ-EDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIK 310
+ +++Y MSR+ A +L + + G F++R+SS G Y+L++ V HY I+
Sbjct: 38 FEWRSFYFPGMSREEAHKLLGEPQVSIGTFLMRDSSRPGEYSLTVREADEGNAVCHYLIE 97
Query: 311 QNSRGE 316
+ E
Sbjct: 98 RGEPKE 103
Score = 39.4 bits (91), Expect = 0.002
Identities = 21/105 (20%), Positives = 37/105 (35%), Gaps = 6/105 (5%)
Query: 319 LSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE---- 374
+S + + E + G F++R+SS G Y+L++ V HY I++ E
Sbjct: 48 MSREEAHKLLGEPQVSIGTFLMRDSSRPGEYSLTVREADEGNAVCHYLIERGEPKEDGTA 107
Query: 375 --FFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATA 417
IP ++N+ + AS L
Sbjct: 108 AAGVKIANQSFPDIPALLNHFKMRVLTEASLLAAYKKPIIEVVVG 152
Score = 32.9 bits (74), Expect = 0.24
Identities = 9/70 (12%), Positives = 19/70 (27%)
Query: 40 RHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEV 99
+ + + S+ I ++ V A + L ++KG V
Sbjct: 217 QSSIGSSGGGAERFSSASTSSDNIELQPRLPAKAKVTFDRVPNAYDPTQLRVKKGQTVLV 276
Query: 100 MDDTQEHWWK 109
+K
Sbjct: 277 TQKMSNGMYK 286
>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL,
SH3 domain, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 81
Score = 70.1 bits (172), Expect = 2e-15
Identities = 10/57 (17%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQ-EHWWKVKDK-NGSVGYIPSNYVKEKE 182
+ + G+L+ KG +++ + + W++VK +G G + + ++E+
Sbjct: 20 CITKCEHTRPKPGELAFRKGDVVTILEACENKSWYRVKHHTSGQEGLLAAGALRERS 76
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural
protein; 1.75A {Gallus gallus}
Length = 80
Score = 70.1 bits (172), Expect = 3e-15
Identities = 17/56 (30%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++V+ALY ++ +++++KG +++ T + WWKV+ N G++P+ YVK+
Sbjct: 2 KELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVE-VNDRQGFVPAAYVKK 56
Score = 48.9 bits (117), Expect = 7e-08
Identities = 13/47 (27%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 72 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNGI 116
++V+ALY ++ +++++KG +++ T + WWKV+ D+ G
Sbjct: 2 KELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGF 48
>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring
finger 2 containing protein, NPPSFA; NMR {Mus musculus}
Length = 70
Score = 69.5 bits (171), Expect = 3e-15
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK-VKDKNGSVGYIPSNYVKE 180
+ VAL+ + A +L L+KG V+ Q+ W K + G G PS+YV
Sbjct: 7 GNMFVALHTYSAHRPEELDLQKGEGIRVLGKYQDGWLKGLSLLTGRTGIFPSDYVIP 63
Score = 47.2 bits (113), Expect = 2e-07
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 72 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
+ VAL+ + A +L L+KG V+ Q+ W K
Sbjct: 7 GNMFVALHTYSAHRPEELDLQKGEGIRVLGKYQDGWLK 44
>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; 2.50A {Mus musculus}
Length = 138
Score = 71.4 bits (175), Expect = 4e-15
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 14/117 (11%)
Query: 307 YHIKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHY 365
+H K SR +EK E K+G F+VR S + YTLS + V+H
Sbjct: 25 FHKKVESRTS---AEKLLQEYCAETGAKDGTFLVRESETFPNDYTLSFWR---SGRVQHC 78
Query: 366 HIKQ---NSRGEFFLSEKHCCHSIPEVVNYHRHNSG---GLASRLKTSPCDRPVPAT 416
I+ N +++L++ +SI ++ ++R RL T P P P+
Sbjct: 79 RIRSTMENGVMKYYLTDNLTFNSIYALIQHYREAHLRCAEFELRL-TDPVPNPNPSG 134
Score = 63.3 bits (154), Expect = 2e-12
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 257 WYVGDM-SRQRAESILKQED-----KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHI 309
W+ + SR AE +L++ K+G F+VR S + YTLS + V+H I
Sbjct: 24 WFHKKVESRTSAEKLLQEYCAETGAKDGTFLVRESETFPNDYTLSFWR---SGRVQHCRI 80
Query: 310 KQ---NSRGEFFLSEKHCCHSIPE 330
+ N +++L++ +SI
Sbjct: 81 RSTMENGVMKYYLTDNLTFNSIYA 104
>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation,
binding specificity; HET: PTR MPD; 1.45A {Homo sapiens}
PDB: 1z3k_A 2ci9_A* 2ci8_A*
Length = 102
Score = 70.3 bits (173), Expect = 4e-15
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
WY G+++R +AE L + EG F++R+S S+ +++SL KH+ ++
Sbjct: 7 WYYGNVTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKAS---GKNKHFKVQL--VD 61
Query: 316 EFFLSEKHCCHSIPE 330
+ + H++ E
Sbjct: 62 NVYCIGQRRFHTMDE 76
Score = 54.5 bits (132), Expect = 1e-09
Identities = 13/67 (19%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Query: 332 KDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVV 390
+ EG F++R+S S+ +++SL KH+ ++ + + H++ E+V
Sbjct: 24 RGVEGDFLIRDSESSPSDFSVSLKAS---GKNKHFKVQL--VDNVYCIGQRRFHTMDELV 78
Query: 391 NYHRHNS 397
+++
Sbjct: 79 EHYKKAP 85
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2,
protei binding, chronic myeloid leukemia; 1.53A {Homo
sapiens}
Length = 69
Score = 68.9 bits (169), Expect = 4e-15
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 121 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
Q+ VVALY + A +L++ +G V E WW G GY P+N+V
Sbjct: 2 QVDTAPTVVALYDYTANRSDELTIHRGDIIRVFFKDNEDWWYGSIGKGQEGYFPANHVAS 61
Score = 47.7 bits (114), Expect = 1e-07
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 68 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
Q+ VVALY + A +L++ +G V E WW G
Sbjct: 2 QVDTAPTVVALYDYTANRSDELTIHRGDIIRVFFKDNEDWWYGSIGKG 49
>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural
genomics, riken structural genomics/proteomics
initiative, RSGI, unknown function; NMR {Homo sapiens}
SCOP: b.34.2.1
Length = 79
Score = 68.9 bits (169), Expect = 5e-15
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMD----DTQEHWWKVKDKNGSVGYIPSNYVKE 180
+V A+Y FKA +LS+ + ++++ WW + NG GY+PSNY+++
Sbjct: 13 NQVYFAVYTFKARNPNELSVSANQKLKILEFKDVTGNTEWWLAE-VNGKKGYVPSNYIRK 71
Query: 181 KE 182
E
Sbjct: 72 TE 73
>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel
beta sheets, structural protein; 2.30A {Gallus gallus}
SCOP: b.34.2.1
Length = 83
Score = 69.3 bits (170), Expect = 5e-15
Identities = 17/57 (29%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++V+ALY ++ +++++KG +++ T + WWKV+ N G++P+ YVK+
Sbjct: 16 GKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVE-VNDRQGFVPAAYVKK 71
Score = 48.2 bits (115), Expect = 1e-07
Identities = 11/41 (26%), Positives = 26/41 (63%)
Query: 71 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
++V+ALY ++ +++++KG +++ T + WWKV+
Sbjct: 16 GKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVE 56
>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural
protein; 1.70A {Rattus norvegicus}
Length = 73
Score = 68.9 bits (169), Expect = 5e-15
Identities = 17/57 (29%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++V+ALY ++ +++++KG +++ T + WWKV+ N G++P+ YVK+
Sbjct: 4 GKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVE-VNDRQGFVPAAYVKK 59
Score = 48.5 bits (116), Expect = 8e-08
Identities = 13/48 (27%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 71 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
++V+ALY ++ +++++KG +++ T + WWK V D+ G
Sbjct: 4 GKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGF 51
>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13;
compact beta-barrel of five anti-parrallel beta-strands;
2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB:
1n5z_A
Length = 92
Score = 69.5 bits (170), Expect = 6e-15
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 126 KVVVALYPFKAIE-GGDLSLEKGAEYEVMDDT-----QEHWWKVKDKNGSVGYIPSNYVK 179
+ ALY F +++L+KG ++ WWKV+ KNG++GYIP NY++
Sbjct: 15 EFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIE 74
Query: 180 E 180
Sbjct: 75 I 75
Score = 46.7 bits (111), Expect = 5e-07
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
Query: 73 KVVVALYPFKAIE-GGDLSLEKGAEYEVMDDT-----QEHWWKVKDKNG 115
+ ALY F +++L+KG ++ WWKV+ KNG
Sbjct: 15 EFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNG 63
>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 68
Score = 68.4 bits (168), Expect = 6e-15
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
+ VA+ + A + LS +G + ++ T WW + + G GYIP+N+V +
Sbjct: 8 EEFVAIADYAATDETQLSFLRGEKILILRQTTADWWWGE-RAGCCGYIPANHVGKHS 63
Score = 47.6 bits (114), Expect = 1e-07
Identities = 9/37 (24%), Positives = 17/37 (45%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
+ VA+ + A + LS +G + ++ T WW
Sbjct: 8 EEFVAIADYAATDETQLSFLRGEKILILRQTTADWWW 44
>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; NMR {Homo sapiens}
Length = 72
Score = 68.6 bits (168), Expect = 6e-15
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Query: 120 DQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK----DKNGSVGYIPS 175
DQ V L+ FK+ +LS G + V ++ WW + GY+P
Sbjct: 5 DQAHLGPKYVGLWDFKSRTDEELSFRAGDVFHVARKEEQWWWATLLDEAGGAVAQGYVPH 64
Query: 176 NYVKEKE 182
NY+ E+E
Sbjct: 65 NYLAERE 71
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 74.9 bits (184), Expect = 7e-15
Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 8/91 (8%)
Query: 419 LSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKV--M 476
+ + +D L LLE +G G++G V +G VA+ + +FI E + +
Sbjct: 3 AAASEPSLDLDNLKLLELIGRGRYGAVYKGSLDER-PVAVKVFSFANRQNFINEKNIYRV 61
Query: 477 TRLQHQNLVQLYGVCSK-----HRPIYIVTD 502
++H N+ + + +V +
Sbjct: 62 PLMEHDNIARFIVGDERVTADGRMEYLLVME 92
Score = 38.3 bits (89), Expect = 0.004
Identities = 13/60 (21%), Positives = 20/60 (33%), Gaps = 13/60 (21%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYL---------ERHNYIHRETKKS 51
+GSL YL H + + V +G+AYL + HR+
Sbjct: 94 YPNGSLXKYLSLHTSDWVS----SCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSR 149
Score = 30.6 bits (69), Expect = 1.1
Identities = 9/40 (22%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 197 LELIHQVLNYTRFSSKSDVWAYGVLMWEVFT--CGKMPYG 234
LE + + + D++A G++ WE+F P
Sbjct: 200 LEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239
>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A
{Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A
2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A
2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...
Length = 62
Score = 68.0 bits (167), Expect = 8e-15
Identities = 16/57 (28%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
++V+ LY ++ +L+++KG +++ T + WWK++ NG G++P+ Y+K+ +
Sbjct: 7 ELVLVLYDYQEKSPRELTVKKGDILTLLNSTNKDWWKIE-VNGRQGFVPAAYLKKLD 62
Score = 46.5 bits (111), Expect = 4e-07
Identities = 10/39 (25%), Positives = 25/39 (64%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
++V+ LY ++ +L+++KG +++ T + WWK++
Sbjct: 7 ELVLVLYDYQEKSPRELTVKKGDILTLLNSTNKDWWKIE 45
>2v1r_A Peroxisomal membrane protein PAS20; protein transport,
translocation, transmembrane, peptide COM structural
genomics, peroxisome; 2.1A {Saccharomyces cerevisiae}
SCOP: b.34.2.1
Length = 80
Score = 68.2 bits (167), Expect = 1e-14
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 126 KVVVALYPFKAIE-GGDLSLEKGAEYEVMDDT-----QEHWWKVKDKNGSVGYIPSNYVK 179
+ ALY F +++L+KG ++ WWKV+ KNG++GYIP NY++
Sbjct: 15 EFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIE 74
Query: 180 E 180
Sbjct: 75 I 75
Score = 46.3 bits (110), Expect = 5e-07
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
Query: 73 KVVVALYPFKAIE-GGDLSLEKGAEYEVMDDT-----QEHWWKVKDKNG 115
+ ALY F +++L+KG ++ WWKV+ KNG
Sbjct: 15 EFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNG 63
>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 118
Score = 69.6 bits (171), Expect = 1e-14
Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
W+ G+M RQ+ +++LK G +++R + + +S+ VKH + +
Sbjct: 18 WFAGNMERQQTDNLLKSH-ASGTYLIRERPAEAERFAISIKFN---DEVKHIKVVEKDNW 73
Query: 316 EFFLSEKHCCHSIPE 330
++E S+ E
Sbjct: 74 -IHITEAKKFDSLLE 87
Score = 64.6 bits (158), Expect = 6e-13
Identities = 17/85 (20%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
G +++R + + +S+ VKH + + ++E S+ E+V Y
Sbjct: 36 ASGTYLIRERPAEAERFAISIKFND---EVKHIKVVEKDNW-IHITEAKKFDSLLELVEY 91
Query: 393 HRHNS-----GGLASRLKTSPCDRP 412
++ +S L + LK P P
Sbjct: 92 YQCHSLKESFKQLDTTLKY-PYSGP 115
>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine,
tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo
sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A
Length = 117
Score = 69.3 bits (170), Expect = 1e-14
Identities = 30/158 (18%), Positives = 51/158 (32%), Gaps = 60/158 (37%)
Query: 257 WYVGDMSRQRAESILKQED-KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
W+ G +SR+ ++ ++ Q+ +G F+VR S + LSL VKHY I
Sbjct: 16 WFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCH---LQKVKHYLILP--- 69
Query: 315 GEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE 374
++EG Y + +
Sbjct: 70 -----------------SEEEGRL--------------------------YFSMDDGQTR 86
Query: 375 FFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRP 412
F + ++V +H+ N G L L+ C R
Sbjct: 87 F--------TDLLQLVEFHQLNRGILPCLLRH-CCTRV 115
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 74.0 bits (182), Expect = 1e-14
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 418 GLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKV-- 475
GL ++ +++++G G++G V GKWRG VA+ T E + E ++
Sbjct: 26 GLPLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWRGE-KVAVKVFFTTEEASWFRETEIYQ 84
Query: 476 MTRLQHQNLVQLYGVCSK----HRPIYIVTD 502
++H+N++ K +Y++TD
Sbjct: 85 TVLMRHENILGFIAADIKGTGSWTQLYLITD 115
Score = 39.7 bits (93), Expect = 0.002
Identities = 11/50 (22%), Positives = 18/50 (36%), Gaps = 6/50 (12%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKK 50
+GSL +YL+ +L + G+ +L H I K
Sbjct: 117 HENGSLYDYLKSTTLDA----KSMLKLAYSSVSGLCHL--HTEIFSTQGK 160
Score = 38.9 bits (91), Expect = 0.003
Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 17/90 (18%)
Query: 198 ELIHQVLNYTRFSS--KSDVWAYGVLMWEVFTC---------GKMPYGRLKNTEVVDRVQ 246
E++ + LN F S +D++++G+++WEV ++PY L ++
Sbjct: 216 EVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDM 275
Query: 247 RGIILEK------PKAWYVGDMSRQRAESI 270
R I+ K P W + RQ + +
Sbjct: 276 REIVCIKKLRPSFPNRWSSDECLRQMGKLM 305
>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A*
Length = 138
Score = 69.7 bits (171), Expect = 1e-14
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
WY G M R AESIL +G F+VR + +S+ V VKH I G
Sbjct: 28 WYAGPMERAGAESILANR-SDGTFLVRQRVKDAAEFAISIKYNV---EVKHIKIMTAE-G 82
Query: 316 EFFLSEKHCCHSIPE 330
+ ++EK + E
Sbjct: 83 LYRITEKKAFRGLTE 97
Score = 65.5 bits (160), Expect = 5e-13
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
+G F+VR + +S+ V VKH I G + ++EK + E+V +
Sbjct: 46 SDGTFLVRQRVKDAAEFAISIKYNV---EVKHIKIMTAE-GLYRITEKKAFRGLTELVEF 101
Query: 393 HRHNS-----GGLASRLKTSPCDRPVPAT 416
++ NS L + L+ P P T
Sbjct: 102 YQQNSLKDCFKSLDTTLQF-PFKEPEKRT 129
>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain,
signaling protein, structural genomics, joint CE
structural genomics, JCSG; 1.50A {Homo sapiens} PDB:
1jwo_A
Length = 98
Score = 68.4 bits (168), Expect = 2e-14
Identities = 16/79 (20%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
++G F+VR S G Y L + V HY + + E ++ ++V +
Sbjct: 25 EDGLFLVRESARHPGDYVLCVSFGR---DVIHYRVLHRDGH-LTIDEAVFFCNLMDMVEH 80
Query: 393 HRHNSGGLASRLKTSPCDR 411
+ + G + ++L P +
Sbjct: 81 YSKDKGAICTKL-VRPKRK 98
Score = 64.9 bits (159), Expect = 2e-13
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 6/75 (8%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
W+ G +S Q A L+ ++G F+VR S G Y L + V HY +
Sbjct: 7 WFHGKISGQEAVQQLQPP-EDGLFLVRESARHPGDYVLCVSFGR---DVIHYRVLHRDGH 62
Query: 316 EFFLSEKHCCHSIPE 330
+ E ++ +
Sbjct: 63 -LTIDEAVFFCNLMD 76
>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein;
1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A
Length = 105
Score = 68.4 bits (168), Expect = 2e-14
Identities = 29/157 (18%), Positives = 56/157 (35%), Gaps = 60/157 (38%)
Query: 257 WYVGDMSRQRAESILKQED-KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
W+ G +SR+ + I+KQ+ +G F++R+S S + L+L H +K++ I
Sbjct: 7 WFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCH---HQKIKNFQILPCE- 62
Query: 315 GEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE 374
D + F + + +TK
Sbjct: 63 -----------------DDGQTFFSLDDGNTK---------------------------- 77
Query: 375 FFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDR 411
+ ++V++++ N G L +LK C R
Sbjct: 78 --------FSDLIQLVDFYQLNKGVLPCKLKH-HCIR 105
>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 111
Score = 68.4 bits (168), Expect = 2e-14
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
AWY+G +SRQ A++ L Q + G F+VR+S + G Y LS+ V HY I
Sbjct: 17 DRSAWYMGPVSRQEAQTRL-QGQRHGMFLVRDSSTCPGDYVLSVSENS---RVSHYIINS 72
Query: 312 NSRGEFFLSEKHCCHSIPE 330
F + + +P
Sbjct: 73 LPNRRFKIGD-QEFDHLPA 90
Score = 63.4 bits (155), Expect = 1e-12
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
+ G F+VR+S + G Y LS+ V HY I F + + +P ++ +
Sbjct: 39 RHGMFLVRDSSTCPGDYVLSVSENS---RVSHYIINSLPNRRFKIGD-QEFDHLPALLEF 94
Query: 393 HRHNSGGLASRLKTSPCDR 411
++ + + L P R
Sbjct: 95 YKIHYLDT-TTLIE-PAPR 111
>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P,
import machine, SH3 domain, protein transport; NMR
{Saccharomyces cerevisiae} SCOP: b.34.2.1
Length = 69
Score = 66.6 bits (163), Expect = 3e-14
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 124 RPKVVVALYPFKAIE-GGDLSLEKGAEYEVMDDT-----QEHWWKVKDKNGSVGYIPSNY 177
ALY F +++L+KG ++ WWKV+ KNG++GYIP NY
Sbjct: 6 HHHFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNY 65
Query: 178 VK 179
++
Sbjct: 66 IE 67
Score = 45.1 bits (107), Expect = 1e-06
Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 6/51 (11%)
Query: 71 RPKVVVALYPFKAIE-GGDLSLEKGAEYEVMDDT-----QEHWWKVKDKNG 115
ALY F +++L+KG ++ WWKV+ KNG
Sbjct: 6 HHHFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNG 56
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3,
actin-binding, cytoplasm, cytoskeleton, phosphorylation,
SH3 domain, DNA damage, DNA repair, nucleus; NMR
{Saccharomyces cerevisiae}
Length = 71
Score = 66.5 bits (163), Expect = 3e-14
Identities = 13/58 (22%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQ-EHWWKVKD-KNGSVGYIPSNYVKE 180
K + Y F A +L+++ G + ++DD + + WW + +G G +P+ +++
Sbjct: 6 KKRGIVQYDFMAESQDELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEP 63
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural
genomics, phosphorylation, structural protein, yeast,
SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Length = 60
Score = 65.6 bits (161), Expect = 5e-14
Identities = 12/56 (21%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQ-EHWWKVKD-KNGSVGYIPSNYVK 179
+ + Y F A +L+++ G + ++DD + + WW + +G G +P+ +++
Sbjct: 3 ERGIVQYDFMAESQDELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIE 58
>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor,
growth regulation, signal transduction, SH2 domain,
nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1
d.93.1.1
Length = 187
Score = 69.5 bits (170), Expect = 5e-14
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRG 315
Y G M + AE++L+ + EG F++R+S+ + L+++S + H I+Q +
Sbjct: 36 CYWGVMDKYAAEALLEGK-PEGTFLLRDSAQEDYLFSVSFRR---YSRSLHARIEQWNHN 91
Query: 316 EFFLSEKHCCHSIPEVKD 333
F + C P++
Sbjct: 92 FSFDAHDPCVFHSPDITG 109
Score = 65.3 bits (159), Expect = 2e-12
Identities = 19/93 (20%), Positives = 40/93 (43%), Gaps = 10/93 (10%)
Query: 334 KEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCC---HSIPEV 389
EG F++R+S+ + L+++S + H I+Q + F + C I +
Sbjct: 54 PEGTFLLRDSAQEDYLFSVSFRR---YSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGL 110
Query: 390 VNYHRHNSGGLASRLK-TSPCDRPVPATAGLSH 421
+ +++ S + ++P R P + L H
Sbjct: 111 LEHYKDPSACMFFEPLLSTPLIRTFPFS--LQH 141
>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction
adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1
d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A
Length = 217
Score = 70.1 bits (171), Expect = 6e-14
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
+A Y FKA +LS ++G +V+++ + W + NG G+IP NY++ K
Sbjct: 3 AIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKP 57
Score = 63.5 bits (154), Expect = 1e-11
Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 6/92 (6%)
Query: 96 EYEVMDDTQEHWWKVKDKNGIR-----KPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEY 150
++ +++ ++ + +P V AL+ F E G+L +G
Sbjct: 124 KFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDPQEDGELGFRRGDFI 183
Query: 151 EVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
VMD++ +WWK +G G P NYV
Sbjct: 184 HVMDNSDPNWWKGAC-HGQTGMFPRNYVTPVN 214
Score = 63.5 bits (154), Expect = 1e-11
Identities = 27/123 (21%), Positives = 49/123 (39%), Gaps = 4/123 (3%)
Query: 250 ILEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYH 308
I KP W+ G + R +AE +L ++ +G F++R S S G ++LS+ V+H+
Sbjct: 53 IEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHFK 109
Query: 309 IKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIK 368
+ ++ G++FL V V RN + + +
Sbjct: 110 VLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDP 169
Query: 369 QNS 371
Q
Sbjct: 170 QED 172
Score = 60.1 bits (145), Expect = 2e-10
Identities = 33/191 (17%), Positives = 68/191 (35%), Gaps = 23/191 (12%)
Query: 270 ILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIP 329
+L +E + + + G + Y ++ I + E ++H
Sbjct: 27 VLNEECDQNWYKAELNGKDG-FIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHD----- 80
Query: 330 EVKDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
G F++R S S G ++LS+ V+H+ + ++ G++FL +S+ E
Sbjct: 81 ------GAFLIRESESAPGDFSLSVKFG---NDVQHFKVLRDGAGKYFLWV-VKFNSLNE 130
Query: 389 VVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRG 448
+V+YHR S ++ ++ + + L G F V
Sbjct: 131 LVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDPQEDGEL--GFRRGDFIHVMDN 188
Query: 449 K----WRGSID 455
W+G+
Sbjct: 189 SDPNWWKGACH 199
Score = 54.3 bits (130), Expect = 1e-08
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
+A Y FKA +LS ++G +V+++ + W + NG
Sbjct: 3 AIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNG 43
Score = 40.8 bits (95), Expect = 5e-04
Identities = 16/56 (28%), Positives = 24/56 (42%)
Query: 59 EISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKN 114
+I +P V AL+ F E G+L +G VMD++ +WWK
Sbjct: 145 QIFLRDIEQVPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHG 200
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 71.7 bits (176), Expect = 7e-14
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 417 AGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKV- 475
+GL ++L E +G G+FG V RGKWRG +VA+ + E + EA++
Sbjct: 30 SGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKWRGE-EVAVKIFSSREERSWFREAEIY 88
Query: 476 -MTRLQHQNLVQLYGVCSKHR----PIYIVTD 502
L+H+N++ +K +++V+D
Sbjct: 89 QTVMLRHENILGFIAADNKDNGTWTQLWLVSD 120
Score = 40.9 bits (96), Expect = 7e-04
Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 12/59 (20%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYL--------ERHNYIHRETKKS 51
HGSL +YL R+ T+ ++ + + G+A+L + HR+ K
Sbjct: 122 HEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 176
Score = 37.8 bits (88), Expect = 0.005
Identities = 9/33 (27%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 198 ELIHQVLNYTRFSS--KSDVWAYGVLMWEVFTC 228
E++ +N F S ++D++A G++ WE+
Sbjct: 221 EVLDDSINMKHFESFKRADIYAMGLVFWEIARR 253
>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide
binding protein; HET: PTR; 1.80A {Mus musculus} SCOP:
d.93.1.1 PDB: 1r1q_A* 1r1s_A*
Length = 100
Score = 66.5 bits (163), Expect = 7e-14
Identities = 19/79 (24%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
+ W+ +SR +AE++L + G F++R S S+ G +++S+ + V+H+ + +
Sbjct: 7 EFPEWFHEGLSRHQAENLLMGK-DIGFFIIRASQSSPGDFSISVRHED---DVQHFKVMR 62
Query: 312 NSRGEFFLSEKHCCHSIPE 330
+++G +FL S+ +
Sbjct: 63 DTKGNYFL-WTEKFPSLNK 80
Score = 58.4 bits (142), Expect = 5e-11
Identities = 17/65 (26%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
G F++R S S+ G +++S+ + V+H+ + ++++G +FL S+ ++V+Y
Sbjct: 29 DIGFFIIRASQSSPGDFSISVRHED---DVQHFKVMRDTKGNYFL-WTEKFPSLNKLVDY 84
Query: 393 HRHNS 397
+R S
Sbjct: 85 YRTTS 89
>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 97
Score = 66.1 bits (161), Expect = 9e-14
Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 8/75 (10%)
Query: 114 NGIRKPDQMIRPKVVVALYPFKAIEG--------GDLSLEKGAEYEVMDDTQEHWWKVKD 165
+G + + ++ VAL+ + + +L ++G +V D + +
Sbjct: 6 SGTDPGAEELPARIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADGFYRGE 65
Query: 166 KNGSVGYIPSNYVKE 180
+G IP N V E
Sbjct: 66 TCARLGLIPCNMVSE 80
Score = 41.8 bits (98), Expect = 3e-05
Identities = 7/51 (13%), Positives = 18/51 (35%), Gaps = 8/51 (15%)
Query: 73 KVVVALYPFKAIEG--------GDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
++ VAL+ + + +L ++G +V D + +
Sbjct: 18 RIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADGFYRGETCA 68
>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 71
Score = 65.0 bits (159), Expect = 1e-13
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V + P+ + ++ EKG EV+ E WW ++ G G+ P++Y+K+
Sbjct: 11 YVTVQPYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIR-YLGKEGWAPASYLKK 62
>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform;
adapter protein, signaling protein; 2.00A {Mus musculus}
PDB: 2hdx_A* 1rpy_A 1rqq_C*
Length = 111
Score = 66.2 bits (162), Expect = 1e-13
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Query: 257 WYVGDMSRQRAESILKQ--EDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNS 313
W+ G +SR +A ++ + G F+VR S + +G L+ + KH + N+
Sbjct: 11 WFHGMLSRLKAAQLVLEGGTGSHGVFLVRQSETRRGECVLTFNFQ---GKAKHLRLSLNA 67
Query: 314 RGEFFLSEKHCCHSIPE 330
G + SI +
Sbjct: 68 AG-QCRVQHLHFQSIFD 83
Score = 60.0 bits (146), Expect = 2e-11
Identities = 19/87 (21%), Positives = 34/87 (39%), Gaps = 8/87 (9%)
Query: 332 KDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVV 390
G F+VR S + +G L+ + KH + N+ G + SI +++
Sbjct: 30 TGSHGVFLVRQSETRRGECVLTFNFQ---GKAKHLRLSLNAAG-QCRVQHLHFQSIFDML 85
Query: 391 NYHRHNSGGLASRLKTSPCD--RPVPA 415
+ R + L S +S VP+
Sbjct: 86 EHFRVHPIPLESGG-SSDVVLVSYVPS 111
>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin
SH3 domain, SPC-S19P20S circular permutant, S protein;
NMR {Synthetic}
Length = 73
Score = 64.7 bits (158), Expect = 1e-13
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
L P+ A G +++++KG +++ T + WWKV+ N G++P+ YVK+
Sbjct: 4 PPLPPYSA-GGREVTMKKGDILTLLNSTNKDWWKVE-VNDRQGFVPAAYVKK 53
Score = 48.9 bits (117), Expect = 6e-08
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNGI------RKPDQMIRPKV 127
L P+ A G +++++KG +++ T + WWKV+ D+ G +K D ++
Sbjct: 4 PPLPPYSA-GGREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDSGTGKEL 62
Query: 128 VVALYPFKA 136
V+ALY ++
Sbjct: 63 VLALYDYQE 71
>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418
protein, SH3MD1, SH3 multiple domains 1, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 70
Score = 64.6 bits (158), Expect = 2e-13
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
+ V + +K E +LSL+ G +V++ + WW V + G++P+ Y++ +
Sbjct: 8 LEQYVVVSNYKKQENSELSLQAGEVVDVIEKNESGWWFVS-TSEEQGWVPATYLEAQN 64
Score = 44.2 bits (105), Expect = 2e-06
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 72 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
+ V + +K E +LSL+ G +V++ + WW V
Sbjct: 8 LEQYVVVSNYKKQENSELSLQAGEVVDVIEKNESGWWFVS 47
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3,
cysteine-rich domain protein, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 68
Score = 63.8 bits (156), Expect = 3e-13
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
VALY F E DL + G +++D+ E WWK K +G+ P+N+V+
Sbjct: 10 YVALYKFVPQENEDLEMRPGDIITLLEDSNEDWWKGK-IQDRIGFFPANFVQRLS 63
Score = 46.9 bits (112), Expect = 3e-07
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
VALY F E DL + G +++D+ E WWK ++D+ G
Sbjct: 10 YVALYKFVPQENEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGF 53
>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain,
feline sarcoma oncogene, structural genomics; NMR {Homo
sapiens} PDB: 2dcr_A
Length = 114
Score = 64.7 bits (158), Expect = 5e-13
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 8/74 (10%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE 316
WY G + R +L G F+VR S K Y LS+ +H+ I Q+
Sbjct: 18 WYHGAIPRAEVAELLVHS---GDFLVRESQGKQEYVLSVLWDG---LPRHFII-QSLDNL 70
Query: 317 FFLSEKHCCHSIPE 330
+ L E SIP
Sbjct: 71 YRL-EGEGFPSIPL 83
Score = 60.9 bits (148), Expect = 9e-12
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 6/81 (7%)
Query: 334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYH 393
G F+VR S K Y LS+ +H+ I Q+ + L E SIP ++++
Sbjct: 34 HSGDFLVRESQGKQEYVLSVLWDG---LPRHFII-QSLDNLYRL-EGEGFPSIPLLIDHL 88
Query: 394 RHNSGGLASRLKTSPCDRPVP 414
L + R VP
Sbjct: 89 LSTQQPLTKKSGVV-LHRAVP 108
>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A
{Saccharomyces cerevisiae}
Length = 70
Score = 62.8 bits (153), Expect = 7e-13
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 125 PKVVVALYPFKAI--EGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
ALYP+ A + ++S E+ +V D + WWK + NG G IPSNYV+
Sbjct: 5 IYKAKALYPYDADDDDAYEISFEQNEILQV-SDIEGRWWKARRANGETGIIPSNYVQL 61
Score = 41.6 bits (98), Expect = 2e-05
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 72 PKVVVALYPFKAI--EGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
ALYP+ A + ++S E+ +V D + WWK + NG
Sbjct: 5 IYKAKALYPYDADDDDAYEISFEQNEILQV-SDIEGRWWKARRANG 49
>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 80
Score = 62.9 bits (153), Expect = 7e-13
Identities = 12/58 (20%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
+ ++ ++ ++S G E +V++ + WW V+ G+ PS+Y+ E
Sbjct: 8 ATSYMTCSAYQKVQDSEISFPAGVEVQVLEKQESGWWYVR-FGELEGWAPSHYLVLDE 64
Score = 44.0 bits (104), Expect = 4e-06
Identities = 7/40 (17%), Positives = 19/40 (47%)
Query: 72 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
+ ++ ++ ++S G E +V++ + WW V+
Sbjct: 8 ATSYMTCSAYQKVQDSEISFPAGVEVQVLEKQESGWWYVR 47
>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain,
formin-binding protein 2, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 72
Score = 62.7 bits (153), Expect = 8e-13
Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
P +A + + +LS +KGA + + WW+ + NG G IP Y+ ++
Sbjct: 8 EPIEAIAKFDYVGRTARELSFKKGASLLLYQRASDDWWEGR-HNGIDGLIPHQYIVVQD 65
Score = 43.1 bits (102), Expect = 7e-06
Identities = 10/48 (20%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Query: 71 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
P +A + + +LS +KGA + + WW+ +G+
Sbjct: 8 EPIEAIAKFDYVGRTARELSFKKGASLLLYQRASDDWWEGRHNGIDGL 55
>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural
genomics/proteomics initiative, RSGI, structural
genomics, signaling protein; NMR {Homo sapiens} SCOP:
b.34.2.1
Length = 69
Score = 62.3 bits (152), Expect = 1e-12
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
+ +ALYP+ ++E GDL+ +G E V WW G PSNYVK K+
Sbjct: 8 GEEYIALYPYSSVEPGDLTFTEGEEILVTQKD-GEWWTGS-IGDRSGIFPSNYVKPKD 63
Score = 43.8 bits (104), Expect = 3e-06
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 72 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
+ +ALYP+ ++E GDL+ +G E V WW + D++GI
Sbjct: 8 GEEYIALYPYSSVEPGDLTFTEGEEILVTQKD-GEWWTGSIGDRSGI 53
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human
osteoclast stimulating factor 1, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 68
Score = 61.8 bits (151), Expect = 1e-12
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
KV ALY F+ +L E+G + D + +WWK G G IPSNYV E
Sbjct: 7 GKVFRALYTFEPRTPDELYFEEGDIIYITDMSDTNWWKGT-SKGRTGLIPSNYVAE 61
Score = 44.1 bits (105), Expect = 2e-06
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 72 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
KV ALY F+ +L E+G + D + +WWK
Sbjct: 7 GKVFRALYTFEPRTPDELYFEEGDIIYITDMSDTNWWK 44
>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine
kinase, signal transduction, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 88
Score = 62.5 bits (152), Expect = 1e-12
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
+ + A +LSL KG + VM+ + WW+ NG VG+ PSNYV E
Sbjct: 20 AYVKFNYMAEREDELSLIKGTKVIVMEKCSDGWWRG-SYNGQVGWFPSNYVTE 71
Score = 43.6 bits (103), Expect = 7e-06
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
+ + A +LSL KG + VM+ + WW+
Sbjct: 20 AYVKFNYMAEREDELSLIKGTKVIVMEKCSDGWWR 54
>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 68
Score = 61.4 bits (150), Expect = 2e-12
Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
L+ F +L + G V+ ++W V NG G +P NY++
Sbjct: 10 HRVLFGFVPETKEELQVMPGNIVFVLKKGNDNWATVM-FNGQKGLVPCNYLEP 61
Score = 41.4 bits (98), Expect = 2e-05
Identities = 9/41 (21%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
L+ F +L + G V+ ++W V NG
Sbjct: 10 HRVLFGFVPETKEELQVMPGNIVFVLKKGNDNWATVM-FNG 49
>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3
domain, PEST phosphatase-interacting protein 1, CD2-
binding protein 1; NMR {Homo sapiens}
Length = 69
Score = 61.5 bits (150), Expect = 2e-12
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
+ ALY + A +L L G EV+ + ++ WW V+ +NG G++P +Y+++
Sbjct: 8 AQEYRALYDYTAQNPDELDLSAGDILEVILEGEDGWWTVE-RNGQRGFVPGSYLEK 62
Score = 42.2 bits (100), Expect = 1e-05
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 72 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
+ ALY + A +L L G EV+ + ++ WW V+
Sbjct: 8 AQEYRALYDYTAQNPDELDLSAGDILEVILEGEDGWWTVE 47
>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418
protein, SH3MD1, SH3 multiple domains 1, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 75
Score = 61.7 bits (150), Expect = 2e-12
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 119 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGS---VGYIPS 175
V V++ ++ E ++G EV++ WW + +G G++PS
Sbjct: 4 GSSGNLKDVYVSIADYEGDEE-TAGFQEGVSMEVLERNPNGWWYCQILDGVKPFKGWVPS 62
Query: 176 NYVKEKE 182
NY+++K
Sbjct: 63 NYLEKKN 69
>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator,
P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 71
Score = 61.5 bits (150), Expect = 2e-12
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 126 KVVVALYPFKAIEGGD-LSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKE 180
+ V A+ P+ + D +S KG + V ++ ++ W V + + G I + V+E
Sbjct: 8 RRVRAILPYTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEE 64
>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal
transduction inhibitor, KIT regula phosphotyrosine,
signaling protein; HET: PTR; 1.45A {Homo sapiens}
Length = 141
Score = 63.7 bits (155), Expect = 2e-12
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRG 315
WY G ++R AE L +G F+VR+SS L +LS + H H I+ S G
Sbjct: 26 WYWGPITRWEAEGKLANV-PDGSFLVRDSSDDRYLLSLSFRS---HGKTLHTRIEH-SNG 80
Query: 316 EFFLSEKHCCH---SIPE 330
F E+ SI +
Sbjct: 81 RFSFYEQPDVEGHTSIVD 98
Score = 58.3 bits (141), Expect = 2e-10
Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 8/92 (8%)
Query: 334 KEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCH---SIPEV 389
+G F+VR+SS L +LS + H H I+ S G F E+ SI ++
Sbjct: 44 PDGSFLVRDSSDDRYLLSLSFRS---HGKTLHTRIEH-SNGRFSFYEQPDVEGHTSIVDL 99
Query: 390 VNYHRHNSGGLASRLKTSPCDRPVPATAGLSH 421
+ + +S A S L++
Sbjct: 100 IEHSIGDSENGAFCYSRSRLPGSATYPVRLTN 131
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein;
1.07A {Homo sapiens}
Length = 58
Score = 61.0 bits (149), Expect = 2e-12
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
+ KV ALY F+ +L E+G + D + +WWK G G IPSNYV E
Sbjct: 2 QVKVFRALYTFEPRTPDELYFEEGDIIYITDMSDTNWWKGT-SKGRTGLIPSNYVAE 57
Score = 42.9 bits (102), Expect = 4e-06
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 71 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
+ KV ALY F+ +L E+G + D + +WWK
Sbjct: 2 QVKVFRALYTFEPRTPDELYFEEGDIIYITDMSDTNWWK 40
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling
protein; 1.80A {Mus musculus}
Length = 60
Score = 60.7 bits (148), Expect = 3e-12
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
P+ +A + + +LS +KGA + E WW+ + NG G +P Y+
Sbjct: 6 PEFAIAKFDYVGRSARELSFKKGASLLLYHRASEDWWEGR-HNGIDGLVPHQYIV 59
Score = 43.0 bits (102), Expect = 5e-06
Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 72 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
P+ +A + + +LS +KGA + E WW+ +G+
Sbjct: 6 PEFAIAKFDYVGRSARELSFKKGASLLLYHRASEDWWEGRHNGIDGL 52
>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 76
Score = 61.2 bits (149), Expect = 3e-12
Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
VA + + +LS +G + + WW+ + NG G IP Y+
Sbjct: 13 AVACFAYTGRTAQELSFRRGDVLRLHERASSDWWRGE-HNGMRGLIPHKYITLPA 66
Score = 43.5 bits (103), Expect = 4e-06
Identities = 8/44 (18%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
VA + + +LS +G + + WW+ G+
Sbjct: 13 AVACFAYTGRTAQELSFRRGDVLRLHERASSDWWRGEHNGMRGL 56
>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein
binding/transferase complex; HET: PTR; NMR {Homo
sapiens} SCOP: d.93.1.1
Length = 109
Score = 62.2 bits (151), Expect = 3e-12
Identities = 26/157 (16%), Positives = 47/157 (29%), Gaps = 49/157 (31%)
Query: 256 AWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
+WY G +SRQ A ++L Q + G F+VR+S ++ G Y LS+ V HY I +
Sbjct: 1 SWYWGRLSRQEAVALL-QGQRHGVFLVRDSSTSPGDYVLSVSEN---SRVSHYIINSSGP 56
Query: 315 GEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE 374
Sbjct: 57 RPPVPPSPAQPPPGVSPS------------------------------------------ 74
Query: 375 FFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDR 411
S+P ++ +++ + + ++ P R
Sbjct: 75 RLRIGDQEFDSLPALLEFYKIHYLDTTTLIE--PVSR 109
>2vwf_A Growth factor receptor-bound protein 2; polymorphism,
phosphoprotein, golgi apparatus, alternative splicing,
HOST-virus interaction, SH3C, signaling; 1.58A {Homo
sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Length = 58
Score = 60.3 bits (147), Expect = 3e-12
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
P V AL+ F E G+L +G VMD++ +WWK +G G P NYV
Sbjct: 2 PTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGA-CHGQTGMFPRNYVTA 56
Score = 46.0 bits (110), Expect = 4e-07
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 72 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
P V AL+ F E G+L +G VMD++ +WWK + G+
Sbjct: 2 PTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGM 48
>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Mus musculus}
Length = 69
Score = 60.7 bits (148), Expect = 3e-12
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
+ V ALY +KA +L+ +GA + WWK Y PSNYV++
Sbjct: 7 GRTVKALYDYKAKRSDELTFCRGALIHNVSKEPGGWWKGDYGTRIQQYFPSNYVED 62
Score = 42.3 bits (100), Expect = 1e-05
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 72 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
+ V ALY +KA +L+ +GA + WWK
Sbjct: 7 GRTVKALYDYKAKRSDELTFCRGALIHNVSKEPGGWWK 44
>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR,
CDC42P-interacting, S signaling protein; NMR
{Lodderomyces elongisporus}
Length = 120
Score = 62.3 bits (151), Expect = 3e-12
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNGSVGYIPSNYVKEKELLG 185
V LY FKA +L + G + W+ K ++ G G +P +YV+ +L+
Sbjct: 6 AVTLYEFKAERDDELDVSPGENLSICAHYDYEWFIAKPINRLGGPGLVPVSYVRIIDLMD 65
Query: 186 LQKYDDVNGLTLELIHQVLN 205
KY V+ E + ++++
Sbjct: 66 PAKYASVDTYDREQVMKIID 85
Score = 45.3 bits (107), Expect = 3e-06
Identities = 12/45 (26%), Positives = 17/45 (37%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKP 119
V LY FKA +L + G + W+ K N + P
Sbjct: 6 AVTLYEFKAERDDELDVSPGENLSICAHYDYEWFIAKPINRLGGP 50
>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 80
Score = 60.9 bits (148), Expect = 4e-12
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 114 NGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH--WWKVKDKNGSVG 171
+G + + +P V ALY F+ + GDL+ + G V+ T H WW+ K G G
Sbjct: 6 SGHERVGNLNQPIEVTALYSFEGQQPGDLNFQAGDRITVISKTDSHFDWWEGK-LRGQTG 64
Query: 172 YIPSNYVK 179
P+NYV
Sbjct: 65 IFPANYVT 72
Score = 44.7 bits (106), Expect = 2e-06
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 66 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH--WWK--VKDKNGI 116
+ +P V ALY F+ + GDL+ + G V+ T H WW+ ++ + GI
Sbjct: 11 VGNLNQPIEVTALYSFEGQQPGDLNFQAGDRITVISKTDSHFDWWEGKLRGQTGI 65
>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project
on protein structural and functional analyses; NMR {Homo
sapiens}
Length = 70
Score = 60.7 bits (148), Expect = 4e-12
Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK-VKDKNGSVGYIPSNYVKE 180
A+Y ++ +L L +G +VM + W+ V + G P NYV
Sbjct: 7 GTPYRAMYQYRPQNEDELELREGDRVDVMQQCDDGWFVGVSRRTQKFGTFPGNYVAP 63
Score = 40.7 bits (96), Expect = 4e-05
Identities = 8/38 (21%), Positives = 16/38 (42%)
Query: 72 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
A+Y ++ +L L +G +VM + W+
Sbjct: 7 GTPYRAMYQYRPQNEDELELREGDRVDVMQQCDDGWFV 44
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3
domain/complex, adaptor protein (MONA); 1.5A {Mus
musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A
2d0n_A
Length = 58
Score = 60.2 bits (147), Expect = 4e-12
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
+ ALY F+A+E +L G EV+D + WW + + +G P+NYV
Sbjct: 2 RWARALYDFEALEEDELGFRSGEVVEVLDSSNPSWWTGR-LHNKLGLFPANYVAP 55
Score = 45.2 bits (108), Expect = 7e-07
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
+ ALY F+A+E +L G EV+D + WW + +K G+
Sbjct: 2 RWARALYDFEALEEDELGFRSGEVVEVLDSSNPSWWTGRLHNKLGL 47
>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 79
Score = 60.8 bits (148), Expect = 5e-12
Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 114 NGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYI 173
+G + VALY ++A ++S + ++ + WW+ G G
Sbjct: 6 SGTYDEYENDLGITAVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRG-VCKGRYGLF 64
Query: 174 PSNYVKEKE 182
P+NYV+ ++
Sbjct: 65 PANYVELRQ 73
Score = 41.2 bits (97), Expect = 3e-05
Identities = 8/44 (18%), Positives = 18/44 (40%)
Query: 66 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
+ VALY ++A ++S + ++ + WW+
Sbjct: 11 EYENDLGITAVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWR 54
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural
protein; NMR {Dictyostelium discoideum}
Length = 80
Score = 60.5 bits (147), Expect = 6e-12
Identities = 12/62 (19%), Positives = 22/62 (35%)
Query: 119 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
K AL + + L ++ + QE+ W + NG G P ++V
Sbjct: 4 LGSPEFAKYARALKDYNVSDTSLLPFKRNDIITITFKDQENKWFMGQLNGKEGSFPVDHV 63
Query: 179 KE 180
+
Sbjct: 64 EI 65
Score = 41.6 bits (98), Expect = 3e-05
Identities = 9/50 (18%), Positives = 16/50 (32%)
Query: 66 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
K AL + + L ++ + QE+ W + NG
Sbjct: 4 LGSPEFAKYARALKDYNVSDTSLLPFKRNDIITITFKDQENKWFMGQLNG 53
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex,
helix-turn-helix, hormone/growth factor complex; NMR
{Homo sapiens} SCOP: b.34.2.1
Length = 62
Score = 59.5 bits (145), Expect = 7e-12
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 121 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
Q+ + V AL+ ++A + DL ++G V+ E W + + G VG P +V++
Sbjct: 1 QLKKGSQVEALFSYEATQPEDLEFQEGDIILVLSKVNEEWLEGE-SKGKVGIFPKVFVED 59
Score = 44.9 bits (107), Expect = 1e-06
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 68 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
Q+ + V AL+ ++A + DL ++G V+ E W + K K GI
Sbjct: 1 QLKKGSQVEALFSYEATQPEDLEFQEGDIILVLSKVNEEWLEGESKGKVGI 51
>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural
genomics/proteomics initiative, RSGI, structural
genomics; NMR {Homo sapiens} SCOP: b.34.2.1
Length = 98
Score = 60.5 bits (147), Expect = 8e-12
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V+A+Y + A +LS KG VM+ WW+ + NG G PSNYVK
Sbjct: 37 VIAMYDYAANNEDELSFSKGQLINVMNKDDPDWWQGE-INGVTGLFPSNYVKM 88
Score = 43.6 bits (103), Expect = 8e-06
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
V+A+Y + A +LS KG VM+ WW+
Sbjct: 37 VIAMYDYAANNEDELSFSKGQLINVMNKDDPDWWQ 71
>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics,
northeast structural genomics consortiu PSI-2, protein
structure initiative; NMR {Homo sapiens}
Length = 72
Score = 59.6 bits (145), Expect = 9e-12
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 117 RKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSN 176
+ + V A+Y F+A E +L+ + G V+DD+ +WWK + + +G PSN
Sbjct: 9 SHMNHQHEARKVRAIYDFEAAEDNELTFKAGEIITVLDDSDPNWWKGE-THQGIGLFPSN 67
Query: 177 YVKE 180
+V
Sbjct: 68 FVTA 71
Score = 44.2 bits (105), Expect = 2e-06
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 66 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
+ + V A+Y F+A E +L+ + G V+DD+ +WWK G+
Sbjct: 11 MNHQHEARKVRAIYDFEAAEDNELTFKAGEIITVLDDSDPNWWKGETHQGIGL 63
>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth
regulation, transforming protein, alternative
initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB:
1tce_A*
Length = 104
Score = 60.7 bits (148), Expect = 9e-12
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
+ + W+ G +SR+ AE++L+ G F+VR S +T G Y L+ KH +
Sbjct: 5 RGEPWFHGKLSRREAEALLQL---NGDFLVRESTTTPGQYVLTGLQSG---QPKHLLLVD 58
Query: 312 NSRGEFFLSEKHCCHSIPE 330
++ H S+
Sbjct: 59 P--EGVVRTKDHRFESVSH 75
Score = 57.3 bits (139), Expect = 1e-10
Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 6/82 (7%)
Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
G F+VR S +T G Y L+ KH + ++ H S+ +++Y
Sbjct: 25 LNGDFLVRESTTTPGQYVLTGLQSG---QPKHLLLVDP--EGVVRTKDHRFESVSHLISY 79
Query: 393 HRHNSGGLASRLKTSPCDRPVP 414
H N + S +PV
Sbjct: 80 HMDNHLPIISAGSELCLQQPVE 101
>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3,
signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A
2l3q_A 2ggr_A
Length = 304
Score = 65.0 bits (157), Expect = 9e-12
Identities = 30/197 (15%), Positives = 50/197 (25%), Gaps = 53/197 (26%)
Query: 38 LERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEY 97
L IH +L + + V AL+ F + DL +KG
Sbjct: 100 LLEFYKIHYLDTTTLIEPVSRSRQGSGVILRQEEAEYVRALFDFNGNDEEDLPFKKGDIL 159
Query: 98 EVMDDTQEHWWK---------------VKDKNGIRKPDQMIRPK---------------- 126
+ D +E WW V+ +
Sbjct: 160 RIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYRPASASVSALIGGNQEGSHPQPLGGPEPG 219
Query: 127 ---------------------VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD 165
V+ A + L+LE G +V W+ +
Sbjct: 220 PYAQPSVNTPLPNLQNGPIYARVIQKRVPNAYDKTALALEVGELVKVTKINVSGQWEG-E 278
Query: 166 KNGSVGYIPSNYVKEKE 182
NG G+ P +V+ +
Sbjct: 279 CNGKRGHFPFTHVRLLD 295
Score = 51.1 bits (121), Expect = 3e-07
Identities = 29/144 (20%), Positives = 48/144 (33%), Gaps = 9/144 (6%)
Query: 250 ILEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYH 308
E+ +WY G +SRQ A ++L Q + G F+VR+SST G Y LS+ V HY
Sbjct: 6 DSEERSSWYWGRLSRQEAVALL-QGQRHGVFLVRDSSTSPGDYVLSVSEN---SRVSHYI 61
Query: 309 IKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIK 368
I + P + + L L + K+ +
Sbjct: 62 INSSGPRPPVPPSPA----QPPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLDTTTLIEP 117
Query: 369 QNSRGEFFLSEKHCCHSIPEVVNY 392
+ + + +
Sbjct: 118 VSRSRQGSGVILRQEEAEYVRALF 141
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2;
STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early
endosome, signaling protein/signaling protein complex;
1.70A {Mus musculus} SCOP: b.34.2.1
Length = 62
Score = 59.1 bits (144), Expect = 1e-11
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V ALY F+A+E +L+ + G V+DD+ +WW+ + + G PSN+V
Sbjct: 8 VRALYDFEAVEDNELTFKHGELITVLDDSDANWWQGE-NHRGTGLFPSNFVTT 59
Score = 43.7 bits (104), Expect = 3e-06
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
V ALY F+A+E +L+ + G V+DD+ +WW+ G+
Sbjct: 8 VRALYDFEAVEDNELTFKHGELITVLDDSDANWWQGENHRGTGL 51
>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine
nucleotide exchange factor (GEF) 9, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 81
Score = 59.7 bits (145), Expect = 1e-11
Identities = 10/52 (19%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
A++ + +L+ + G +V+D + + WW + + G+ P+++V+
Sbjct: 13 AEAVWDHVTMANRELAFKAGDVIKVLDASNKDWWWGQ-IDDEEGWFPASFVR 63
Score = 45.5 bits (108), Expect = 1e-06
Identities = 9/44 (20%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
A++ + +L+ + G +V+D + + WW + D+ G
Sbjct: 13 AEAVWDHVTMANRELAFKAGDVIKVLDASNKDWWWGQIDDEEGW 56
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal
transducing adaptor molecule, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 88
Score = 60.1 bits (146), Expect = 1e-11
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
+ V ALY F+A+E +L+ + G V+DD+ +WWK + + +G PSN+V
Sbjct: 17 ARKVRALYDFEAVEDNELTFKHGEIIIVLDDSDANWWKGE-NHRGIGLFPSNFVTT 71
Score = 45.5 bits (108), Expect = 1e-06
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 72 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
+ V ALY F+A+E +L+ + G V+DD+ +WWK G+
Sbjct: 17 ARKVRALYDFEAVEDNELTFKHGEIIIVLDDSDANWWKGENHRGIGL 63
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A
{Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A
3sem_A 1k76_A 1kfz_A
Length = 58
Score = 59.1 bits (144), Expect = 1e-11
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
K V AL+ F E G+L+ ++G +++ +WW+ + N G PSNYV
Sbjct: 2 TKFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQ-LNNRRGIFPSNYVCP 56
Score = 43.3 bits (103), Expect = 3e-06
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 72 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
K V AL+ F E G+L+ ++G +++ +WW+
Sbjct: 2 TKFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWE 39
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 64.7 bits (158), Expect = 1e-11
Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 7/91 (7%)
Query: 418 GLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKV 475
L + L LLE G+FG V + + VA + E
Sbjct: 13 DLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNE-YVAVKIFPIQDKQSWQNEYEVYS 71
Query: 476 MTRLQHQNLVQLYGVCSKHRPI----YIVTD 502
+ ++H+N++Q G + + +++T
Sbjct: 72 LPGMKHENILQFIGAEKRGTSVDVDLWLITA 102
Score = 37.0 bits (86), Expect = 0.012
Identities = 6/30 (20%), Positives = 15/30 (50%)
Query: 199 LIHQVLNYTRFSSKSDVWAYGVLMWEVFTC 228
L + + D++A G+++WE+ +
Sbjct: 205 LEGAINFQRDAFLRIDMYAMGLVLWELASR 234
Score = 35.8 bits (83), Expect = 0.024
Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 14/59 (23%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYL----------ERHNYIHRETK 49
GSL ++L+ + + L + + +G+AYL + HR+ K
Sbjct: 104 HEKGSLSDFLKANVVSWN----ELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIK 158
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 64.3 bits (157), Expect = 1e-11
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 430 ELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKV--MTRLQHQNLVQL 487
++L E +G G+FG V RGKWRG +VA+ + E + EA++ L+H+N++
Sbjct: 4 TIVLQESIGKGRFGEVWRGKWRGE-EVAVKIFSSREERSWFREAEIYQTVMLRHENILGF 62
Query: 488 YGVCSK----HRPIYIVTD 502
+K +++V+D
Sbjct: 63 IAADNKDNGTWTQLWLVSD 81
Score = 40.8 bits (96), Expect = 7e-04
Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 6/50 (12%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKK 50
HGSL +YL R+ T+ ++ + + G+A+L H I K
Sbjct: 83 HEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHL--HMEIVGTQGK 126
Score = 38.1 bits (89), Expect = 0.005
Identities = 9/33 (27%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 198 ELIHQVLNYTRFSS--KSDVWAYGVLMWEVFTC 228
E++ +N F S ++D++A G++ WE+
Sbjct: 182 EVLDDSINMKHFESFKRADIYAMGLVFWEIARR 214
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A
{Acanthamoeba} PDB: 2drk_A
Length = 58
Score = 58.7 bits (143), Expect = 1e-11
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V ALY + A G +L+ ++G V WW+ + NG G++P+NYV++
Sbjct: 6 VKALYDYDAQTGDELTFKEGDTIIVHQKDPAGWWEG-ELNGKRGWVPANYVQD 57
>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain,
signal transduction inhibitor nuclear protein; 1.9A
{Homo sapiens} SCOP: a.271.1.1 d.93.1.1
Length = 169
Score = 61.8 bits (150), Expect = 2e-11
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
WY G M+ A+ LK+ EG F++R+SS L T+S+ T + I+ G
Sbjct: 19 WYWGSMTVNEAKEKLKEA-PEGTFLIRDSSHSDYLLTISVKT---SAGPTNLRIEY-QDG 73
Query: 316 EFFLSEKHCCHSIPE 330
+F L C S +
Sbjct: 74 KFRLDSIICVKSKLK 88
Score = 50.6 bits (121), Expect = 1e-07
Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 11/88 (12%)
Query: 334 KEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSR------GEFFLSEKHCCHSI 386
EG F++R+SS L T+S+ T + I+ S+ S+
Sbjct: 37 PEGTFLIRDSSHSDYLLTISVKT---SAGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSV 93
Query: 387 PEVVNYHRHNSGGLASRLKTSPCDRPVP 414
+++Y+ + + +P + V
Sbjct: 94 VHLIDYYVQMCKDKRTGPE-APRNGTVH 120
>2bbu_A Suppressor of cytokine signaling 3; SH2 domain, extended SH2
subdomain, PEST motif, protein complex, cytokine
regulator; HET: PTR; NMR {Mus musculus}
Length = 164
Score = 61.9 bits (150), Expect = 2e-11
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRG 315
+Y ++ A +L E G F++R+SS + +TLS+ T K+ I+
Sbjct: 25 FYWSAVTGGEANLLLSAE-PAGTFLIRDSSDQRHFFTLSVKT---QSGTKNLRIQCEGGS 80
Query: 316 EFFLSEKHCCHSIPE 330
S+ +P
Sbjct: 81 FSLQSDPRSTQPVPR 95
>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing
adapter molecule 1, SCAM-1, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 90
Score = 59.4 bits (144), Expect = 2e-11
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK-VKDKNGSVGYIPSNYVK 179
VA Y FK +LS KG ++ E+W++ G G P++YV+
Sbjct: 20 AVAQYTFKGDLEVELSFRKGEHICLIRKVNENWYEGRITGTGRQGIFPASYVQ 72
Score = 42.8 bits (101), Expect = 1e-05
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
VA Y FK +LS KG ++ E+W++
Sbjct: 20 AVAQYTFKGDLEVELSFRKGEHICLIRKVNENWYE 54
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces
cerevisiae} PDB: 1ynz_A
Length = 58
Score = 58.3 bits (142), Expect = 2e-11
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
V ALY F + GDL L+ G + ++++ W+K NG G P+NYVK
Sbjct: 5 VEALYQFDPQQDGDLGLKPGDKVQLLEKLSPEWYKGS-CNGRTGIFPANYVK 55
Score = 44.4 bits (106), Expect = 1e-06
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
V ALY F + GDL L+ G + ++++ W+K + GI
Sbjct: 5 VEALYQFDPQQDGDLGLKPGDKVQLLEKLSPEWYKGSCNGRTGI 48
>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development,
SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding,
nucleus, phosphoprotein; NMR {Homo sapiens}
Length = 116
Score = 60.0 bits (146), Expect = 2e-11
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
WY G + R A+ +LK+ +G F+VR S G Y LS+Y+ +H+ I
Sbjct: 19 WYHGAIPRIEAQELLKK---QGDFLVRESHGKPGEYVLSVYSD---GQRRHFII--QYVD 70
Query: 316 EFFLSEKHCCHSIPE 330
+ E +IP+
Sbjct: 71 NMYRFEGTGFSNIPQ 85
Score = 56.6 bits (137), Expect = 3e-10
Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
K+G F+VR S G Y LS+Y+ +H+ I + E +IP+++++
Sbjct: 35 KQGDFLVRESHGKPGEYVLSVYSD---GQRRHFII--QYVDNMYRFEGTGFSNIPQLIDH 89
Query: 393 HRHNSGGLASRLKTSPCDRPVP 414
H + + P+P
Sbjct: 90 HYTTKQVITKKSGV-VLLNPIP 110
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin,
C-CBL-associated protein, CAP, SH3 domain protein 5
SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens}
PDB: 2dlm_A
Length = 68
Score = 58.8 bits (143), Expect = 2e-11
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
A + FKA +L L+KG + ++W++ + +G VG P Y++
Sbjct: 10 ARAKFDFKAQTLKELPLQKGDIVYIYKQIDQNWYEGE-HHGRVGIFPRTYIEL 61
Score = 41.4 bits (98), Expect = 2e-05
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
A + FKA +L L+KG + ++W++
Sbjct: 10 ARAKFDFKAQTLKELPLQKGDIVYIYKQIDQNWYE 44
>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Mus musculus}
Length = 78
Score = 58.9 bits (143), Expect = 2e-11
Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
AL F+ + +L K ++ EH W + NG G+ P+ +V+
Sbjct: 10 AKALLDFERHDDDELGFRKNDIITIISQKDEHCWVG-ELNGLRGWFPAKFVEV 61
Score = 43.1 bits (102), Expect = 7e-06
Identities = 8/35 (22%), Positives = 13/35 (37%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
AL F+ + +L K ++ EH W
Sbjct: 10 AKALLDFERHDDDELGFRKNDIITIISQKDEHCWV 44
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2
domain, SRC homology 3, RAS signaling pathway, proto-
oncogene, phosphorylation; 1.5A {Homo sapiens} PDB:
2j06_A
Length = 65
Score = 58.2 bits (141), Expect = 2e-11
Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 125 PKVVVALYPFKAIEGGD-LSLEKGAEYEVMDDTQEHWWKVK-DKNGSVGYIPSNYVKE 180
+ V A+ P+ + D +S KG + V ++ ++ W V + G I + V+E
Sbjct: 5 RRRVRAILPYTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEE 62
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast,
SH3 domain, structural genomics, contractIle protein;
0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Length = 68
Score = 58.1 bits (141), Expect = 3e-11
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGS--VGYIPSNYVK 179
P VVA +P+K+ DL+ EK E V W+ +D NG G P ++V
Sbjct: 7 PFKVVAQFPYKSDYEDDLNFEKDQEIIVTSVEDAEWYFGEYQDSNGDVIEGIFPKSFVA 65
Score = 46.1 bits (110), Expect = 5e-07
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 72 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGIRK 118
P VVA +P+K+ DL+ EK E V W+ +D NG
Sbjct: 7 PFKVVAQFPYKSDYEDDLNFEKDQEIIVTSVEDAEWYFGEYQDSNGDVI 55
>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural
genomics, riken structural genomics/proteomics
initiative, RSGI, protein binding; NMR {Homo sapiens}
SCOP: b.34.2.1
Length = 96
Score = 59.1 bits (143), Expect = 3e-11
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 7/74 (9%)
Query: 114 NGIRKPDQMIRPKVVVALYPFKAIEG------GDLSLEKGAEYEVMDDTQEH-WWKVKDK 166
+G K + + VA Y + +G +L L G V D E +++ +
Sbjct: 6 SGTSKQRYSGKVHLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGELL 65
Query: 167 NGSVGYIPSNYVKE 180
+G G +PSN+V
Sbjct: 66 DGQRGLVPSNFVDF 79
>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2,
signal transduction, adapter molecule, signaling
protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A
2eyw_A
Length = 230
Score = 62.6 bits (151), Expect = 3e-11
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 121 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
+ + V AL+ F + DL +KG + D +E WW +D G G IP YV++
Sbjct: 132 RQEEAEYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK 191
Score = 56.1 bits (134), Expect = 4e-09
Identities = 27/144 (18%), Positives = 49/144 (34%), Gaps = 9/144 (6%)
Query: 250 ILEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYH 308
E+ +WY G +SRQ A ++L Q + G F+VR+S ++ G Y LS+ V HY
Sbjct: 8 DSEERSSWYWGRLSRQEAVALL-QGQRHGVFLVRDSSTSPGDYVLSVSEN---SRVSHYI 63
Query: 309 IKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIK 368
I + + P + + L L + K+ +
Sbjct: 64 INSSGPRPPVPP----SPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLDTTTLIEP 119
Query: 369 QNSRGEFFLSEKHCCHSIPEVVNY 392
+ + + +
Sbjct: 120 VSRSRQGSGVILRQEEAEYVRALF 143
Score = 48.3 bits (114), Expect = 2e-06
Identities = 22/115 (19%), Positives = 33/115 (28%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEI 60
G G L + Q + L IH +L
Sbjct: 65 NSSGPRPPVPPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLDTTTLIEPVSRSR 124
Query: 61 SFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
+ + V AL+ F + DL +KG + D +E WW +D G
Sbjct: 125 QGSGVILRQEEAEYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEG 179
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 64.9 bits (158), Expect = 3e-11
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 21/189 (11%)
Query: 320 SEKHCCHSIPEVK-DKEGCFVVRNSSTKGLYTLSLYTKVPHPH-VKHYHIKQNSRGEFFL 377
++ +I ++ K+ F + + G S + P + K+ +
Sbjct: 61 KSRYTYTTIEGLRAGKQYEFRIIAENKHGQ---SKPCEPTAPVLIPGDERKRRRGYDVDE 117
Query: 378 SEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEEL 437
K NY + + +PV D ++I EEL
Sbjct: 118 QGKIVRGKGTVSSNYDNYVF-----DIWKQYYPQPVEIKHDHVLDHYDIH-------EEL 165
Query: 438 GSGQFGVVRRGKWRGS-IDVAM---MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSK 493
G+G FGVV R R + + A M ++ +E + M+ L+H LV L+
Sbjct: 166 GTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFED 225
Query: 494 HRPIYIVTD 502
+ ++ +
Sbjct: 226 DNEMVMIYE 234
Score = 29.8 bits (67), Expect = 2.7
Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
V +D+W+ GVL + + G P+G + E + V+ A+
Sbjct: 327 VAEGKPVGYYTDMWSVGVLSY-ILLSGLSPFGGENDDETLRNVKSCDWNMDDSAF 380
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 63.4 bits (155), Expect = 3e-11
Identities = 14/73 (19%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
+ E+LG G+FG+V R S +K + +E ++ +H+N++ L+
Sbjct: 9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHE 68
Query: 490 VCSKHRPIYIVTD 502
+ ++ +
Sbjct: 69 SFESMEELVMIFE 81
Score = 28.7 bits (65), Expect = 4.7
Identities = 10/46 (21%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
V + S+ +D+W+ G L++ V G P+ N ++++ +
Sbjct: 174 VHQHDVVSTATDMWSLGTLVY-VLLSGINPFLAETNQQIIENIMNA 218
>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3
domain, riken structural genomics/proteomics initiative,
RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Length = 76
Score = 58.1 bits (141), Expect = 3e-11
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
+V A + FK +LS+ KG V + WW+ NG G+ PSNYV+E
Sbjct: 9 HQLIVKARFNFKQTNEDELSVCKGDIIYVTRVEEGGWWEG-TLNGRTGWFPSNYVRE 64
>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput,
structural genomics, contractIle protein; 1.80A
{Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A
Length = 69
Score = 57.7 bits (140), Expect = 4e-11
Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 124 RPKVVVALYPFKA-IEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSV-GYIPSNYVKE 180
+ A Y F +L L+KG + D W K +GS G++P+ Y+
Sbjct: 1 KDPKFEAAYDFPGSGSSSELPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTP 59
Score = 40.4 bits (95), Expect = 6e-05
Identities = 11/46 (23%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Query: 71 RPKVVVALYPFKA-IEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
+ A Y F +L L+KG + D W K +G
Sbjct: 1 KDPKFEAAYDFPGSGSSSELPLKKGDIVFISRDEPSGWSLAKLLDG 46
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2
domain, SH3 zinc-finger, SH3- binding, UBL conjugation
pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A
2krm_A
Length = 62
Score = 57.2 bits (139), Expect = 4e-11
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
+ Y + A+ +L++ G + QE W + NG G P N+VKE
Sbjct: 4 YIVEYDYDAVHDDELTIRVGEIIRNVKKLQEEGWLEGELNGRRGMFPDNFVKE 56
Score = 37.9 bits (89), Expect = 3e-04
Identities = 7/34 (20%), Positives = 14/34 (41%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW 108
+ Y + A+ +L++ G + QE W
Sbjct: 4 YIVEYDYDAVHDDELTIRVGEIIRNVKKLQEEGW 37
>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 79
Score = 57.7 bits (140), Expect = 4e-11
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++ ALY F+A + +L+LEKG + + +E WW NG G+ P+ YV+E
Sbjct: 8 RLCKALYSFQARQDDELNLEKGDIVIIHEKKEEGWWFG-SLNGKKGHFPAAYVEE 61
Score = 41.2 bits (97), Expect = 4e-05
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
++ ALY F+A + +L+LEKG + + +E WW
Sbjct: 8 RLCKALYSFQARQDDELNLEKGDIVIIHEKKEEGWWF 44
>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR
{Homo sapiens}
Length = 92
Score = 58.2 bits (141), Expect = 4e-11
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 112 DKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVG 171
+ G K + R + + + +L L+ G EV+ + +E WW+ NG G
Sbjct: 6 QQMGTNKRGERRRRRCQ-VAFSYLPQNDDELELKVGDIIEVVGEVEEGWWEGV-LNGKTG 63
Query: 172 YIPSNYVKE 180
PSN++KE
Sbjct: 64 MFPSNFIKE 72
Score = 39.7 bits (93), Expect = 1e-04
Identities = 9/39 (23%), Positives = 18/39 (46%)
Query: 71 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
R + + + +L L+ G EV+ + +E WW+
Sbjct: 17 RRRRCQVAFSYLPQNDDELELKVGDIIEVVGEVEEGWWE 55
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor
protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Length = 58
Score = 57.2 bits (139), Expect = 5e-11
Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
+ + ++A +L++ G + WW+ NG G P N+V+E
Sbjct: 4 AIVEFDYQAQHDDELTISVGEIITNIRKEDGGWWEG-QINGRRGLFPDNFVRE 55
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus
musculus}
Length = 60
Score = 57.2 bits (139), Expect = 5e-11
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
ALY + A + +LS +++ + WW + G G P+NYV +
Sbjct: 8 CKALYAYDAQDTDELSFNANDIIDIIKEDPSGWWTGR-LRGKQGLFPNNYVTK 59
Score = 40.3 bits (95), Expect = 5e-05
Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
ALY + A + +LS +++ + WW ++ K G+
Sbjct: 8 CKALYAYDAQDTDELSFNANDIIDIIKEDPSGWWTGRLRGKQGL 51
>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N
protein 1; endocytosis, N-WAsp, dynamin, pacsin I,
transferase; 2.64A {Mus musculus} PDB: 2x3x_D
Length = 60
Score = 57.2 bits (139), Expect = 5e-11
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH-WWKVKDKNGSVGYIPSNYVKE 180
V ALY + E +LS + G E + + E W + + +G +G P+NYV+
Sbjct: 6 VRALYDYDGQEQDELSFKAGDELTKLGEEDEQGWCRGRLDSGQLGLYPANYVEA 59
>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus
musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A
4gbq_A
Length = 74
Score = 57.3 bits (139), Expect = 5e-11
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQ-EHWWKVKDKNGSVGYIPSNYVKEKE 182
+A Y FKA +LS ++G +V+++ ++W+K + NG G+IP NY++ K
Sbjct: 12 AIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAE-LNGKDGFIPKNYIEMKP 66
Score = 38.8 bits (91), Expect = 2e-04
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQ-EHWWK 109
+A Y FKA +LS ++G +V+++ ++W+K
Sbjct: 12 AIAKYDFKATADDELSFKRGDILKVLNEECDQNWYK 47
>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein,
phosphorylation, SH3 domain, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 78
Score = 57.4 bits (139), Expect = 6e-11
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
VVA+Y + + +LS ++GA V+ + W++ NG G P NYV+
Sbjct: 20 VVAIYDYTKDKEDELSFQEGAIIYVIKKNDDGWYEGV-MNGVTGLFPGNYVES 71
Score = 41.2 bits (97), Expect = 4e-05
Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
VVA+Y + + +LS ++GA V+ + W++ + G+
Sbjct: 20 VVAIYDYTKDKEDELSFQEGAIIYVIKKNDDGWYEGVMNGVTGL 63
>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13,
protein-protein interaction, structural genomics; NMR
{Mus musculus}
Length = 93
Score = 57.9 bits (140), Expect = 7e-11
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH----WWKVKDKNGSVGYIPSNYVKE 180
V A Y F A+ ++S G + Q+ W + G IP+NYVK
Sbjct: 19 VARAEYDFVAVSDEEISFRAGDMLNLALKEQQPKVRGWLLASLDGQTTGLIPANYVKI 76
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 62.7 bits (153), Expect = 7e-11
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 433 LLEELGSGQFGVVRRGKWRG--------SIDVA-MMKEGTMSEDDFIEEAKVMTRLQHQN 483
L E +G G F VVRR R +DVA +S +D EA + L+H +
Sbjct: 28 LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPH 87
Query: 484 LVQLYGVCSKHRPIYIVTD 502
+V+L S +Y+V +
Sbjct: 88 IVELLETYSSDGMLYMVFE 106
>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural
genomics/proteomics initiative, RSGI, structural
genomics, endocytosis/exocytosis complex; NMR {Homo
sapiens} SCOP: b.34.2.1
Length = 74
Score = 57.0 bits (138), Expect = 7e-11
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
AL + A + L+ K V++ QE+WW + +G G+ P +YVK
Sbjct: 9 ENLKAQALCSWTAKKDNHLNFSKHDIITVLEQ-QENWWFG-EVHGGRGWFPKSYVKI 63
Score = 41.2 bits (97), Expect = 3e-05
Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Query: 71 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
AL + A + L+ K V++ QE+WW V G
Sbjct: 9 ENLKAQALCSWTAKKDNHLNFSKHDIITVLEQ-QENWWFGEVHGGRGW 55
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 62.0 bits (151), Expect = 8e-11
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 430 ELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKV--MTRLQHQNLVQL 487
++ LLE +G G++G V RG W+G +VA+ + E + E ++ L+H+N++
Sbjct: 9 DITLLECVGKGRYGEVWRGSWQGE-NVAVKIFSSRDEKSWFRETELYNTVMLRHENILGF 67
Query: 488 YGVC----SKHRPIYIVTD 502
++++T
Sbjct: 68 IASDMTSRHSSTQLWLITH 86
Score = 40.4 bits (95), Expect = 8e-04
Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 6/50 (12%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKK 50
GSL +YL+ L + + + G+A+L H I K
Sbjct: 88 HEMGSLYDYLQLTTLDT----VSCLRIVLSIASGLAHL--HIEIFGTQGK 131
Score = 37.3 bits (87), Expect = 0.007
Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 198 ELIHQVLNYTRFSS--KSDVWAYGVLMWEVFTC 228
E++ + + F S + D+WA+G+++WEV
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein,
structural protein; 1.30A {Saccharomyces cerevisiae}
SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Length = 58
Score = 56.4 bits (137), Expect = 8e-11
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK-VKDKNGSVGYIPSNYVK 179
A Y + A E +L+ + + ++ + WW +K+GS G PSNYV
Sbjct: 3 ATAEYDYDAAEDNELTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVS 55
Score = 39.1 bits (92), Expect = 1e-04
Identities = 7/35 (20%), Positives = 15/35 (42%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
A Y + A E +L+ + + ++ + WW
Sbjct: 3 ATAEYDYDAAEDNELTFVENDKIINIEFVDDDWWL 37
>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Mus musculus}
Length = 77
Score = 57.0 bits (138), Expect = 9e-11
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 128 VVALYPFKAIEGGD-LSLEKGAEYEVMD-DTQEHWWKVKDKNGSVGYIPSNYVK 179
+Y F A G + L++ +G V + + W + K+ G G +P++YV+
Sbjct: 12 ARVMYDFAAEPGNNELTVTEGEIITVTNPNVGGGWLEGKNNKGEQGLVPTDYVE 65
Score = 38.8 bits (91), Expect = 2e-04
Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 75 VVALYPFKAIEGGD-LSLEKGAEYEVMD-DTQEHWWKVKDKNG 115
+Y F A G + L++ +G V + + W + K+ G
Sbjct: 12 ARVMYDFAAEPGNNELTVTEGEIITVTNPNVGGGWLEGKNNKG 54
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A
{Saccharomyces cerevisiae} PDB: 1yp5_A
Length = 58
Score = 56.5 bits (137), Expect = 9e-11
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 127 VVVALYPFKA-IEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSV-GYIPSNYVKE 180
+ A Y F +L L+KG + + W K +GS G++P+ Y+K
Sbjct: 2 MFEAAYDFPGSGSPSELPLKKGDVIYITREEPSGWSLGKLLDGSKEGWVPTAYMKP 57
Score = 39.1 bits (92), Expect = 1e-04
Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Query: 74 VVVALYPFKA-IEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
+ A Y F +L L+KG + + W K +G
Sbjct: 2 MFEAAYDFPGSGSPSELPLKKGDVIYITREEPSGWSLGKLLDG 44
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide
interaction, signaling protein; HET: NCO; 0.92A {Rattus
norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Length = 59
Score = 56.5 bits (137), Expect = 9e-11
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
VV A + F+ +LS KG V + WW+ NG G+ PSNYV+E
Sbjct: 6 VVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWE-GTHNGRTGWFPSNYVRE 58
>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK,
structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Length = 68
Score = 56.5 bits (137), Expect = 9e-11
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
+ + +L L+ G EV+ + +E WW+ NG G PSN++KE
Sbjct: 10 CQVAFSYLPQNDDELELKVGDIIEVVGEVEEGWWEGV-LNGKTGMFPSNFIKE 61
Score = 38.8 bits (91), Expect = 2e-04
Identities = 8/35 (22%), Positives = 16/35 (45%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
+ + +L L+ G EV+ + +E WW+
Sbjct: 10 CQVAFSYLPQNDDELELKVGDIIEVVGEVEEGWWE 44
>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2,
SH3 domain, TKL kinase, MKN28, structural GEN structural
genomics consortium, SGC; 2.00A {Homo sapiens}
Length = 89
Score = 57.2 bits (138), Expect = 1e-10
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQ-----EHWWKVKDKNGSVGYIPSNYV 178
V A++ ++A +L+L +G +V+ E WW + +G VG PSNYV
Sbjct: 31 VWTAVFDYEAAGDEELTLRRGDRVQVLSQDCAVSGDEGWWTGQLPSGRVGVFPSNYV 87
>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein
1, islet-brain-1, IB-1, mitogen-activated P kinase
8-interacting protein 1; 3.00A {Rattus norvegicus}
Length = 71
Score = 56.5 bits (137), Expect = 1e-10
Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK-VKDKNGSVGYIPSNYVKE 180
+ A++ F +L LE V +++W++ + G+ G P+ Y E
Sbjct: 5 HEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAIE 62
Score = 38.8 bits (91), Expect = 2e-04
Identities = 7/39 (17%), Positives = 16/39 (41%)
Query: 71 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
+ A++ F +L LE V +++W++
Sbjct: 5 HEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYE 43
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 62.3 bits (152), Expect = 1e-10
Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 15/128 (11%)
Query: 390 VNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLL-------------EE 436
+++H H+S G+ + TA + + P + E
Sbjct: 1 MHHHHHHSSGVDLGTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESE 60
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK--EGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKH 494
LG G +V R K +G+ +K + T+ + E V+ RL H N+++L +
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETP 120
Query: 495 RPIYIVTD 502
I +V +
Sbjct: 121 TEISLVLE 128
Score = 29.2 bits (66), Expect = 2.9
Identities = 9/47 (19%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMP-YGRLKNTEVVDRVQRG 248
+L + + D+W+ G++ + + CG P Y + + R+
Sbjct: 221 ILRGCAYGPEVDMWSVGIITY-ILLCGFEPFYDERGDQFMFRRILNC 266
>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide
complex, cytokine regulator; HET: PTR; 2.00A {Mus
musculus}
Length = 152
Score = 59.2 bits (143), Expect = 1e-10
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRG 315
+Y ++ A +L E G F++R+SS + +TLS+ T K+ I Q G
Sbjct: 36 FYWSAVTGGEANLLLSAE-PAGTFLIRDSSDQRHFFTLSVKT---QSGTKNLRI-QXEGG 90
Query: 316 EFFL 319
F L
Sbjct: 91 SFSL 94
Score = 45.4 bits (107), Expect = 6e-06
Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 12/91 (13%)
Query: 334 KEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHS------- 385
G F++R+SS + +TLS+ T K+ I Q G F L
Sbjct: 54 PAGTFLIRDSSDQRHFFTLSVKT---QSGTKNLRI-QXEGGSFSLQSDPRSTQPVPRFDX 109
Query: 386 IPEVVNYHRHNSGGLASRLKTSPCDRPVPAT 416
+ ++V+++ S K +
Sbjct: 110 VLKLVHHYMPPQALPGSTPKRAYYIYSGGEK 140
>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 73
Score = 56.6 bits (137), Expect = 1e-10
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMD--DTQEHWWKVKDKNGSVGYIPSNYVKE 180
VA Y F A + +LSL +G + + WWK + NG +G+ PS YV+E
Sbjct: 10 AVARYNFAARDMRELSLREGDVVRIYSRIGGDQGWWKGE-TNGRIGWFPSTYVEE 63
Score = 40.0 bits (94), Expect = 8e-05
Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMD--DTQEHWWK--VKDKNGI 116
VA Y F A + +LSL +G + + WWK + G
Sbjct: 10 AVARYNFAARDMRELSLREGDVVRIYSRIGGDQGWWKGETNGRIGW 55
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3
domain, sturctural genomics, structural genomics; 1.39A
{Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A
2a08_A
Length = 60
Score = 56.4 bits (137), Expect = 1e-10
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH--WWKVKDKNGSVGYIPSNYVK 179
VALY F E GDL KG ++ + WW + NG G P+NYV+
Sbjct: 6 AVALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGR-VNGREGIFPANYVE 58
Score = 41.8 bits (99), Expect = 1e-05
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH--WWK--VKDKNGI 116
VALY F E GDL KG ++ + WW V + GI
Sbjct: 6 AVALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGRVNGREGI 51
>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo
sapiens}
Length = 79
Score = 56.9 bits (138), Expect = 1e-10
Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Query: 112 DKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVG 171
+ D+M P+ AL+ F +L+ + G ++ + W + G+ G
Sbjct: 6 HHHHHHHMDRMAAPRAE-ALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGT-VRGATG 63
Query: 172 YIPSNYVK 179
P ++VK
Sbjct: 64 IFPLSFVK 71
Score = 42.3 bits (100), Expect = 2e-05
Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Query: 66 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
D+M P+ AL+ F +L+ + G ++ + W + V+ GI
Sbjct: 13 MDRMAAPRAE-ALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGI 64
>3u23_A CD2-associated protein; structural genomics, structural genomics
consortium, SGC, BE barrel, adaptor protein, protein
binding; 1.11A {Homo sapiens} PDB: 2krn_A
Length = 65
Score = 56.1 bits (136), Expect = 1e-10
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
+ L+ + +L L+ G ++ ++ +E WW N +G PSN+VKE
Sbjct: 8 RQCKVLFEYIPQNEDELELKVGDIIDINEEVEEGWWSGT-LNNKLGLFPSNFVKE 61
Score = 38.0 bits (89), Expect = 3e-04
Identities = 7/37 (18%), Positives = 17/37 (45%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
+ L+ + +L L+ G ++ ++ +E WW
Sbjct: 8 RQCKVLFEYIPQNEDELELKVGDIIDINEEVEEGWWS 44
>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D
of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis,
membrane, phagocytosis; NMR {Homo sapiens}
Length = 119
Score = 57.8 bits (139), Expect = 1e-10
Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGSVGYIPSNYVKEK 181
+ + VA+Y F+ LSL+ G + + W++ + G P +++ K
Sbjct: 58 KERHGVAIYNFQGSGAPQLSLQIGDVVRIQETC-GDWYRGYLIKHKMLQGIFPKSFIHIK 116
Query: 182 EL 183
E+
Sbjct: 117 EV 118
Score = 40.4 bits (94), Expect = 2e-04
Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 71 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
+ + VA+Y F+ LSL+ G + + W++
Sbjct: 58 KERHGVAIYNFQGSGAPQLSLQIGDVVRIQETC-GDWYR 95
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural
genomics/proteomics initiative, RSGI, structural
genomics, endocytosis/exocytosis complex; NMR {Homo
sapiens} SCOP: b.34.2.1
Length = 80
Score = 56.3 bits (136), Expect = 2e-10
Identities = 12/61 (19%), Positives = 23/61 (37%), Gaps = 4/61 (6%)
Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK----VKDKNGSVGYIPSNYVK 179
++ + A LSL G ++ WW+ + K G+ P+++VK
Sbjct: 6 SGEIAQVTSAYVASGSEQLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVK 65
Query: 180 E 180
Sbjct: 66 L 66
Score = 40.1 bits (94), Expect = 9e-05
Identities = 7/39 (17%), Positives = 13/39 (33%)
Query: 71 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
++ + A LSL G ++ WW+
Sbjct: 6 SGEIAQVTSAYVASGSEQLSLAPGQLILILKKNTSGWWQ 44
>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR
{Homo sapiens}
Length = 65
Score = 55.7 bits (135), Expect = 2e-10
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
L+ + +L L+ G ++ ++ +E WW N +G PSN+VKE
Sbjct: 4 CKVLFEYIPQNEDELELKVGDIIDINEEVEEGWWSGT-LNNKLGLFPSNFVKE 55
Score = 38.4 bits (90), Expect = 3e-04
Identities = 7/35 (20%), Positives = 16/35 (45%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
L+ + +L L+ G ++ ++ +E WW
Sbjct: 4 CKVLFEYIPQNEDELELKVGDIIDINEEVEEGWWS 38
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 61.9 bits (151), Expect = 2e-10
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAMM-----KEGTMSEDDFIEEAKVMTRLQHQNLVQ 486
L EELG G F VVRR + + A M K EA++ L+H N+V+
Sbjct: 15 LFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVR 74
Query: 487 LYGVCSKHRPIYIVTD 502
L+ S+ Y++ D
Sbjct: 75 LHDSISEEGHHYLIFD 90
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85,
PIX/COOL, protein-protein interaction, X-RAY,
endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Length = 64
Score = 55.3 bits (134), Expect = 3e-10
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
VV A + F+ +LS KG V + WW+ NG G+ PSNYV+E
Sbjct: 5 SQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWE-GTHNGRTGWFPSNYVRE 60
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction,
hydrolase, protein binding; 1.65A {Mus musculus} PDB:
2d1x_A
Length = 65
Score = 54.9 bits (133), Expect = 3e-10
Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
+ALY ++A ++S + ++ + WW+ G G P+NYV+ ++
Sbjct: 12 AIALYDYQAAGDDEISFDPDDIITNIEMIDDGWWR-GVCKGRYGLFPANYVELRQ 65
Score = 38.0 bits (89), Expect = 3e-04
Identities = 7/35 (20%), Positives = 17/35 (48%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
+ALY ++A ++S + ++ + WW+
Sbjct: 12 AIALYDYQAAGDDEISFDPDDIITNIEMIDDGWWR 46
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm,
phosphorylation, SH3-binding, signaling protein; NMR
{Mus musculus} PDB: 2kro_A
Length = 64
Score = 54.9 bits (133), Expect = 4e-10
Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVM--DDTQEHWWKVKDKNGSVGYIPSNYVKE 180
+ L+P+ +L+ +G ++ + + WWK + NG G P N+ +
Sbjct: 6 KEYCRTLFPYTGTNEDELTFREGEIIHLISKETGEAGWWKGE-LNGKEGVFPDNFAVQ 62
Score = 38.7 bits (91), Expect = 2e-04
Identities = 9/49 (18%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Query: 72 PKVVVALYPFKAIEGGDLSLEKGAEYEVM--DDTQEHWWK--VKDKNGI 116
+ L+P+ +L+ +G ++ + + WWK + K G+
Sbjct: 6 KEYCRTLFPYTGTNEDELTFREGEIIHLISKETGEAGWWKGELNGKEGV 54
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 60.3 bits (147), Expect = 4e-10
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM---MKEGTMSEDDFIEEAKVMTRLQHQNLVQLY 488
+E LGSG F V K R + A+ K + E V+ +++H+N+V L
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 489 GVCSKHRPIYIVTD 502
+ Y+V
Sbjct: 73 DIYESTTHYYLVMQ 86
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 73
Score = 55.0 bits (133), Expect = 4e-10
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVM---DDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V ALY ++ +LS +GA ++ + + +W+ + NG +G PS V+E
Sbjct: 11 VKALYDYEGQTDDELSFPEGAIIRILNKENQDDDGFWEG-EFNGRIGVFPSVLVEE 65
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1
GTPase-activating protein...; GTPase activation,
membrane, metal-binding, SH3 domain; NMR {Homo sapiens}
PDB: 2rqt_A 2rqu_A
Length = 76
Score = 55.0 bits (133), Expect = 4e-10
Identities = 11/59 (18%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGSVGYIPSNYVKE 180
+ + V +Y +A +L+ +G V + + WW ++ + G P ++V
Sbjct: 9 KVRRVKTIYDCQADNDDELTFIEGEVIIVTGEEDQEWWIGHIEGQPERKGVFPVSFVHI 67
Score = 42.3 bits (100), Expect = 1e-05
Identities = 8/39 (20%), Positives = 17/39 (43%)
Query: 71 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
+ + V +Y +A +L+ +G V + + WW
Sbjct: 9 KVRRVKTIYDCQADNDDELTFIEGEVIIVTGEEDQEWWI 47
>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm,
cytoskeleton, SH3 domain, SIG protein; NMR
{Saccharomyces cerevisiae} PDB: 2rqw_A
Length = 108
Score = 55.9 bits (135), Expect = 4e-10
Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNGSVGYIPSNYVK 179
+ LY FKA + +L+ G + W+ K + G G +P +V
Sbjct: 9 IVLYDFKAEKADELTTYVGENLFICAHHNCEWFIAKPIGRLGGPGLVPVGFVS 61
Score = 40.2 bits (94), Expect = 2e-04
Identities = 10/44 (22%), Positives = 17/44 (38%)
Query: 76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKP 119
+ LY FKA + +L+ G + W+ K + P
Sbjct: 9 IVLYDFKAEKADELTTYVGENLFICAHHNCEWFIAKPIGRLGGP 52
>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide
COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A
Length = 64
Score = 54.5 bits (132), Expect = 4e-10
Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK-VKDKNGSVGYIPSNYVK 179
+ A+Y + A + ++S G + + W + G G +P+NY++
Sbjct: 7 RTYRAMYDYSAQDEDEVSFRDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPANYIE 61
Score = 39.1 bits (92), Expect = 1e-04
Identities = 6/37 (16%), Positives = 14/37 (37%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
+ A+Y + A + ++S G + + W
Sbjct: 7 RTYRAMYDYSAQDEDEVSFRDGDYIVNVQPIDDGWMY 43
>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein,
structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
SCOP: b.34.2.1
Length = 72
Score = 55.0 bits (133), Expect = 4e-10
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH-WWKVKDKNGSVGYIPSNYVKE 180
ALY KA +LS G ++ + +QE W + NG G IP NYV+
Sbjct: 13 AKALYACKAEHDSELSFTAGTVFDNVHPSQEPGWLEG-TLNGKTGLIPENYVEF 65
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces
cerevisiae}
Length = 54
Score = 54.1 bits (131), Expect = 5e-10
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
+ A+Y ++A ++S++ G V+ W + +G G P++Y K
Sbjct: 3 MEAIYAYEAQGDDEISIDPGDIITVIRGDDGSGWTYGECDGLKGLFPTSYCK 54
Score = 36.7 bits (86), Expect = 7e-04
Identities = 7/34 (20%), Positives = 16/34 (47%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW 108
+ A+Y ++A ++S++ G V+ W
Sbjct: 3 MEAIYAYEAQGDDEISIDPGDIITVIRGDDGSGW 36
>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene
homolog (avian)- signaling protein; NMR {Homo sapiens}
PDB: 2lqw_A*
Length = 303
Score = 59.6 bits (143), Expect = 5e-10
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 119 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
P + V LY F + DL +KG +++ +E WW ++K+G VG IP YV
Sbjct: 119 PTAEDNLEYVRTLYDFPGNDAEDLPFKKGEILVIIEKPEEQWWSARNKDGRVGMIPVPYV 178
Query: 179 KEK 181
++
Sbjct: 179 EKL 181
Score = 52.7 bits (125), Expect = 1e-07
Identities = 29/126 (23%), Positives = 48/126 (38%), Gaps = 5/126 (3%)
Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQ 311
AWY+G +SRQ A++ L Q + G F+VR+SST G Y LS+ V HY I
Sbjct: 10 DRSAWYMGPVSRQEAQTRL-QGQRHGMFLVRDSSTCPGDYVLSVSENS---RVSHYIINS 65
Query: 312 NSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNS 371
F + ++ H ++ + ++ + + + N
Sbjct: 66 LPNRRFKIGDQEFDHLPALLEFYKIHYLDTTTLIEPAPRYPSPPMGSVSAPNLPTAEDNL 125
Query: 372 RGEFFL 377
L
Sbjct: 126 EYVRTL 131
Score = 49.6 bits (117), Expect = 1e-06
Identities = 13/55 (23%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
+ A + L+LE G +V W+ + NG G P +VK +
Sbjct: 242 AIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEG-EVNGRKGLFPFTHVKIFD 295
Score = 40.4 bits (93), Expect = 9e-04
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 65 WPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
P + V LY F + DL +KG +++ +E WW ++K+G
Sbjct: 118 LPTAEDNLEYVRTLYDFPGNDAEDLPFKKGEILVIIEKPEEQWWSARNKDG 168
Score = 32.7 bits (73), Expect = 0.23
Identities = 9/59 (15%), Positives = 18/59 (30%)
Query: 51 SLYPSSLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
++ S I+ + + A + L+LE G +V W+
Sbjct: 218 AVSGSPGAAITPLPSTQNGPVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWE 276
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 60.0 bits (146), Expect = 5e-10
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 10/78 (12%)
Query: 433 LLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNL 484
+ EELG G F VVRR + I+ + EA++ +LQH N+
Sbjct: 33 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS--ARDFQKLEREARICRKLQHPNI 90
Query: 485 VQLYGVCSKHRPIYIVTD 502
V+L+ + Y+V D
Sbjct: 91 VRLHDSIQEESFHYLVFD 108
>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane,
nuclear protein, phosphorylation, polymorphism,
transport, structural genomics; NMR {Homo sapiens}
Length = 70
Score = 54.5 bits (132), Expect = 5e-10
Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK-VKDKNGSVGYIPSNYVK 179
+A + F ++S KG ++ E+W++ G P YV
Sbjct: 10 AIAKFNFNGDTQVEMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVD 62
Score = 41.1 bits (97), Expect = 3e-05
Identities = 7/35 (20%), Positives = 16/35 (45%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
+A + F ++S KG ++ E+W++
Sbjct: 10 AIAKFNFNGDTQVEMSFRKGERITLLRQVDENWYE 44
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 60.1 bits (146), Expect = 5e-10
Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVA---MMKEGTMSEDDFIEEAKVMTRLQHQNLVQLY 488
+LEELGSG FGVV R + + + + + E +M +L H L+ L+
Sbjct: 55 ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLH 114
Query: 489 GVCSKHRPIYIVTD 502
+ ++ +
Sbjct: 115 DAFEDKYEMVLILE 128
Score = 31.2 bits (71), Expect = 0.87
Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
++++ +D+WA GVL + V G P+ + E + V+R
Sbjct: 220 EIVDREPVGFYTDMWAIGVLGY-VLLSGLSPFAGEDDLETLQNVKRC 265
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein;
NMR {Saccharomyces cerevisiae}
Length = 73
Score = 54.6 bits (132), Expect = 6e-10
Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDK-NGSVGYIPSNYVKE 180
VALY F+ +L L +G + + W +++ G +P +V
Sbjct: 8 AVALYDFEPENDNELRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSY 61
Score = 37.3 bits (87), Expect = 7e-04
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
VALY F+ +L L +G + + W ++++G
Sbjct: 8 AVALYDFEPENDNELRLAEGDIVFISYKHGQGWLVAENESG 48
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1;
SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB:
1ywp_A 1ywo_A
Length = 61
Score = 54.1 bits (131), Expect = 6e-10
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V AL+ +KA +L+ K A + ++ WW+ + PSNYV+E
Sbjct: 6 VKALFDYKAQREDELTFTKSAIIQNVEKQDGGWWRGDYGGKKQLWFPSNYVEE 58
Score = 39.1 bits (92), Expect = 1e-04
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
V AL+ +KA +L+ K A + ++ WW+
Sbjct: 6 VKALFDYKAQREDELTFTKSAIIQNVEKQDGGWWR 40
>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein
2A, endophilin 1, EEN-B1, structural genomics, NPPSFA;
NMR {Homo sapiens} PDB: 2knb_B 3iql_A
Length = 73
Score = 54.2 bits (131), Expect = 7e-10
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
ALY F+ G+L ++G + + E+W++ +G G+ P NYV+
Sbjct: 10 CRALYDFEPENEGELGFKEGDIITLTNQIDENWYEGM-LHGHSGFFPINYVEI 61
Score = 40.3 bits (95), Expect = 7e-05
Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
ALY F+ G+L ++G + + E+W++ + +G
Sbjct: 10 CRALYDFEPENEGELGFKEGDIITLTNQIDENWYEGMLHGHSGF 53
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3
domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Length = 60
Score = 54.1 bits (131), Expect = 7e-10
Identities = 12/59 (20%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Query: 122 MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
+I+ AL+ F +L+ + G ++ + W + G+ G P ++VK
Sbjct: 1 LIKHMRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGT-VRGATGIFPLSFVKI 58
Score = 41.3 bits (98), Expect = 2e-05
Identities = 10/50 (20%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Query: 69 MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
+I+ AL+ F +L+ + G ++ + W + V+ GI
Sbjct: 1 LIKHMRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGI 50
>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A
{Saccharomyces cerevisiae}
Length = 59
Score = 53.7 bits (130), Expect = 7e-10
Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDK-NGSVGYIPSNYVKEKE 182
+ VALY F+ +L L +G + + W +++ G +P +V +
Sbjct: 2 QRAVALYDFEPENDNELRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYIQ 59
Score = 36.4 bits (85), Expect = 0.001
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
+ VALY F+ +L L +G + + W ++++G
Sbjct: 2 QRAVALYDFEPENDNELRLAEGDIVFISYKHGQGWLVAENESG 44
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate
head cDNA, riken FULL-length enriched library,
clone:4831401O22, structural genomics; NMR {Mus
musculus}
Length = 68
Score = 54.1 bits (131), Expect = 8e-10
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
AL ++ GDL KG + E+W++ + NG G P++ V+
Sbjct: 10 AKALCNYRGKNPGDLKFNKGDVILLRRQLDENWYQGE-INGVSGIFPASSVEV 61
Score = 39.9 bits (94), Expect = 7e-05
Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
AL ++ GDL KG + E+W++ + +GI
Sbjct: 10 AKALCNYRGKNPGDLKFNKGDVILLRRQLDENWYQGEINGVSGI 53
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 58.7 bits (143), Expect = 8e-10
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM-----MKEGTMSEDDFIEEAKVMTRLQHQNLVQ 486
+ EELG G F VVRR + + ++ A K EA++ +LQH N+V+
Sbjct: 10 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVR 69
Query: 487 LYGVCSKHRPIYIVTD 502
L+ + Y+V D
Sbjct: 70 LHDSIQEESFHYLVFD 85
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 58.7 bits (143), Expect = 8e-10
Identities = 17/80 (21%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM---------MKEGTMSEDDFIEEAKVMTRLQHQ 482
+ EELGSGQF +VR+ + +G+ + A +S ++ E ++ ++H
Sbjct: 9 MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHP 68
Query: 483 NLVQLYGVCSKHRPIYIVTD 502
N++ L+ + + ++ +
Sbjct: 69 NIITLHDIFENKTDVVLILE 88
Score = 27.9 bits (63), Expect = 7.7
Identities = 9/46 (19%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
++NY ++D+W+ GV+ + + G P+ E + +
Sbjct: 182 IVNYEPLGLEADMWSIGVITY-ILLSGASPFLGETKQETLTNISAV 226
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural
genomics, joint CENT structural genomics, JCSG, protein
structure initiative; HET: MLY; 2.20A {Homo sapiens}
PDB: 2frw_A 2js0_A
Length = 58
Score = 53.7 bits (129), Expect = 9e-10
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
+ + A +LSL G+ VM+ + WW+ NG +G+ PSNYV E
Sbjct: 4 AFVXFAYVAEREDELSLVXGSRVTVMEXCSDGWWR-GSYNGQIGWFPSNYVLE 55
Score = 34.4 bits (79), Expect = 0.005
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
+ + A +LSL G+ VM+ + WW+
Sbjct: 4 AFVXFAYVAEREDELSLVXGSRVTVMEXCSDGWWR 38
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3
(SH3) domain, all beta structure, signaling protein;
HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Length = 62
Score = 53.3 bits (129), Expect = 1e-09
Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK-VKDKNGSVGYIPSNYVKE 180
+ A++ F +L LE V +++W++ + G+ G P+ Y E
Sbjct: 4 QTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAIE 59
Score = 36.0 bits (84), Expect = 0.001
Identities = 7/37 (18%), Positives = 16/37 (43%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
+ A++ F +L LE V +++W++
Sbjct: 4 QTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYE 40
>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 71
Score = 53.8 bits (130), Expect = 1e-09
Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQ---EHWWKVKDKNGSVGYIPSNYVKE 180
ALY +L+ +G +++ E WWK +G G P+N ++
Sbjct: 10 ARALYDNCPDCSDELAFSRGDILTILEQHVPESEGWWKCL-LHGRQGLAPANRLQI 64
Score = 37.6 bits (88), Expect = 5e-04
Identities = 9/38 (23%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQ---EHWWK 109
ALY +L+ +G +++ E WWK
Sbjct: 10 ARALYDNCPDCSDELAFSRGDILTILEQHVPESEGWWK 47
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 59.3 bits (144), Expect = 1e-09
Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM-----MKEGTMSEDDFIEEAKVMTRLQHQNLVQ 486
++ LG G FG V + K R + + A+ + E +++ +L H N+++
Sbjct: 26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 487 LYGVCSKHRPIYIVTD 502
L+ + YIV +
Sbjct: 86 LFEILEDSSSFYIVGE 101
Score = 29.3 bits (66), Expect = 3.3
Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 208 RFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
+ K DVW+ GV+++ + G P+ +++ RV+ G W
Sbjct: 198 TYDEKCDVWSAGVILYILL-SGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Mus musculus}
Length = 70
Score = 53.4 bits (129), Expect = 1e-09
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVM--DDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++P++A +L++++G ++ D WW+ + NG G P N+VK
Sbjct: 10 CKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGE-LNGRRGVFPDNFVKL 63
Score = 38.4 bits (90), Expect = 3e-04
Identities = 8/46 (17%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVM--DDTQEHWWK--VKDKNGI 116
++P++A +L++++G ++ D WW+ + + G+
Sbjct: 10 CKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGV 55
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 59.3 bits (144), Expect = 1e-09
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM-----MKEGTMSEDDFIEEAKVMTRLQHQNLVQ 486
+++LGSG +G V + + + ++ A+ T S +EE V+ L H N+++
Sbjct: 41 RVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMK 100
Query: 487 LYGVCSKHRPIYIVTD 502
LY R Y+V +
Sbjct: 101 LYDFFEDKRNYYLVME 116
Score = 32.7 bits (75), Expect = 0.27
Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 208 RFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
++ K DVW+ GV+++ + G P+G + E++ +V++G W
Sbjct: 213 KYDEKCDVWSIGVILFILL-AGYPPFGGQTDQEILRKVEKGKYTFDSPEW 261
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB:
2o31_A 2o9v_A 2o2w_A
Length = 67
Score = 53.4 bits (129), Expect = 1e-09
Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK-VKDKNGSVGYIPSNYVK 179
+A + F ++S KG ++ E+W++ G P YV
Sbjct: 9 AIAKFNFNGDTQVEMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVD 61
Score = 39.9 bits (94), Expect = 8e-05
Identities = 7/35 (20%), Positives = 16/35 (45%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
+A + F ++S KG ++ E+W++
Sbjct: 9 AIAKFNFNGDTQVEMSFRKGERITLLRQVDENWYE 43
>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Mus musculus}
Length = 81
Score = 53.9 bits (130), Expect = 1e-09
Identities = 12/67 (17%), Positives = 23/67 (34%), Gaps = 3/67 (4%)
Query: 115 GIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEV--MDDTQEHWWKVKDKNGSVGY 172
G+ + + LY + A +LSL V + W + + G
Sbjct: 7 GLNDLKESSNNRKARVLYDYDAANSTELSLLADEVITVFSVVGMDSDWLMGE-RGNQKGK 65
Query: 173 IPSNYVK 179
+P Y++
Sbjct: 66 VPITYLE 72
Score = 37.0 bits (86), Expect = 0.001
Identities = 8/40 (20%), Positives = 12/40 (30%), Gaps = 2/40 (5%)
Query: 72 PKVVVALYPFKAIEGGDLSLEKGAEYEV--MDDTQEHWWK 109
+ LY + A +LSL V + W
Sbjct: 17 NRKARVLYDYDAANSTELSLLADEVITVFSVVGMDSDWLM 56
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel,
endosome, L binding, membrane, phosphoprotein,
proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Length = 73
Score = 53.4 bits (129), Expect = 2e-09
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
ALY F+ G+L +G + + E+W++ +G G+ P +YV+
Sbjct: 16 CKALYDFEPENDGELGFREGDLITLTNQIDENWYEGM-LHGQSGFFPLSYVQV 67
Score = 39.6 bits (93), Expect = 1e-04
Identities = 11/54 (20%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 65 WPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
+ + +P ALY F+ G+L +G + + E+W++ + ++G
Sbjct: 7 FMPPLDQPSCK-ALYDFEPENDGELGFREGDLITLTNQIDENWYEGMLHGQSGF 59
>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase;
NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A
Length = 71
Score = 53.1 bits (128), Expect = 2e-09
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V AL+ +KA +L+ K A + ++ + WW+ + PSNYV+E
Sbjct: 9 VKALFDYKAQREDELTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEE 61
Score = 39.6 bits (93), Expect = 1e-04
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
V AL+ +KA +L+ K A + ++ + WW+
Sbjct: 9 VKALFDYKAQREDELTFIKSAIIQNVEKQEGGWWR 43
>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural
genomics, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Length = 93
Score = 53.6 bits (129), Expect = 2e-09
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH--WWKVKDKNGSVGYIPSNYVKE 180
ALYPF+A ++S G +V + T W G+ G+ P NYV++
Sbjct: 5 SSGYRALYPFEARNHDEMSFNSGDIIQVDEKTVGEPGWLYGS-FQGNFGWFPCNYVEK 61
Score = 37.5 bits (87), Expect = 0.001
Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 4/49 (8%)
Query: 72 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH--WWK--VKDKNGI 116
ALYPF+A ++S G +V + T W + G
Sbjct: 5 SSGYRALYPFEARNHDEMSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGW 53
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 58.6 bits (142), Expect = 2e-09
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 430 ELMLLEELGSGQFGVVRRGKWRGS-IDVAM---MKEGTMSEDDFIEEAKVMTRLQHQNLV 485
+ E LG G+FG V + + + + +A G +++ E VM +L H NL+
Sbjct: 90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLI 149
Query: 486 QLYGVCSKHRPIYIVTD 502
QLY I +V +
Sbjct: 150 QLYDAFESKNDIVLVME 166
Score = 30.4 bits (69), Expect = 1.2
Identities = 11/47 (23%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
+V+NY S +D+W+ GV+ + + G P+ + E ++ +
Sbjct: 258 EVVNYDFVSFPTDMWSVGVIAY-MLLSGLSPFLGDNDAETLNNILAC 303
>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3,
signaling protein; NMR {Gallus gallus}
Length = 77
Score = 52.9 bits (127), Expect = 2e-09
Identities = 14/47 (29%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 136 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
A+ +++++KG +++ T + WWKV+ N G++P+ YVK+ +
Sbjct: 2 AMGPREVTMKKGDILTLLNSTNKDWWKVE-VNDRQGFVPAAYVKKLD 47
Score = 33.7 bits (77), Expect = 0.016
Identities = 10/36 (27%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNGI 116
A+ +++++KG +++ T + WWKV+ D+ G
Sbjct: 2 AMGPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGF 37
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 58.0 bits (141), Expect = 2e-09
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 10/80 (12%)
Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM---------MKEGTMSEDDFIEEAKVMTRLQHQ 482
EELGSGQF VV++ + + + + A +S +D E ++ +QH
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 483 NLVQLYGVCSKHRPIYIVTD 502
N++ L+ V + ++ +
Sbjct: 75 NVITLHEVYENKTDVILILE 94
Score = 29.5 bits (67), Expect = 2.5
Identities = 10/46 (21%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
++NY ++D+W+ GV+ + + G P+ E + V
Sbjct: 188 IVNYEPLGLEADMWSIGVITY-ILLSGASPFLGDTKQETLANVSAV 232
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 58.0 bits (141), Expect = 2e-09
Identities = 15/80 (18%), Positives = 35/80 (43%), Gaps = 10/80 (12%)
Query: 433 LLEELGSGQFGVVRRGKWRGS--------IDVAMMKEGTMSED--DFIEEAKVMTRLQHQ 482
+ EELGSGQF +V++ + + + I + + E ++ ++ H
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 483 NLVQLYGVCSKHRPIYIVTD 502
N++ L+ V + ++ +
Sbjct: 76 NVITLHDVYENRTDVVLILE 95
Score = 29.1 bits (66), Expect = 2.9
Identities = 9/46 (19%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
++NY ++D+W+ GV+ + + G P+ E + +
Sbjct: 189 IVNYEPLGLEADMWSIGVITY-ILLSGASPFLGDTKQETLANITSV 233
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor
protein, downregulation, CBL, apoptosis, junction,
cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Length = 73
Score = 53.1 bits (128), Expect = 2e-09
Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVM--DDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++P++A +L++++G ++ D WW+ + NG G P N+VK
Sbjct: 8 SKDYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWE-GELNGRRGVFPDNFVKL 65
Score = 38.1 bits (89), Expect = 3e-04
Identities = 7/41 (17%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 71 RPKVVVALYPFKAIEGGDLSLEKGAEYEVM--DDTQEHWWK 109
++P++A +L++++G ++ D WW+
Sbjct: 8 SKDYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWE 48
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo
sapiens}
Length = 69
Score = 52.7 bits (127), Expect = 2e-09
Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVM---DDTQEHWWKVKDKNGSVGYIPSNYVKE 180
+ ALY A +LS KG V+ + WW +G G +P N +K
Sbjct: 5 LAKALYDNVAESPDELSFRKGDIMTVLEQDTQGLDGWWLCS-LHGRQGIVPGNRLKI 60
Score = 38.1 bits (89), Expect = 3e-04
Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Query: 74 VVVALYPFKAIEGGDLSLEKGAEYEVM---DDTQEHWWK--VKDKNGI 116
+ ALY A +LS KG V+ + WW + + GI
Sbjct: 5 LAKALYDNVAESPDELSFRKGDIMTVLEQDTQGLDGWWLCSLHGRQGI 52
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 57.2 bits (139), Expect = 2e-09
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 11/78 (14%)
Query: 433 LLEELGSGQFGVVRRGKWRGS--------IDVAMMKEGTMSEDDFIEEAKVMTRLQHQNL 484
+LGSG FG V + R S I+ + + E +V+ L H N+
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQV---PMEQIEAEIEVLKSLDHPNI 82
Query: 485 VQLYGVCSKHRPIYIVTD 502
++++ V + +YIV +
Sbjct: 83 IKIFEVFEDYHNMYIVME 100
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Length = 65
Score = 52.6 bits (127), Expect = 2e-09
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKEL 183
+ F+A +L+L+KG + + ++W + + +G +G P+NYV+ L
Sbjct: 4 ARLKFDFQAQSPKELTLQKGDIVYIHKEVDKNWLE-GEHHGRLGIFPANYVEVLPL 58
Score = 37.6 bits (88), Expect = 4e-04
Identities = 7/35 (20%), Positives = 17/35 (48%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
+ F+A +L+L+KG + + ++W +
Sbjct: 4 ARLKFDFQAQSPKELTLQKGDIVYIHKEVDKNWLE 38
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 57.2 bits (139), Expect = 3e-09
Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM-----MKEGTMSEDDFIEEAKVMTRLQHQNLVQ 486
++ LG G FG V + K R + + A+ + E +++ +L H N+++
Sbjct: 26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 487 LYGVCSKHRPIYIVTD 502
L+ + YIV +
Sbjct: 86 LFEILEDSSSFYIVGE 101
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 57.2 bits (139), Expect = 3e-09
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM---MKEGTMSEDDFIEEAKVMTRLQHQNLVQLY 488
L +G G +G V+ +G+ I A K D F +E ++M L H N+++LY
Sbjct: 13 LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLY 72
Query: 489 GVCSKHRPIYIVTD 502
+ IY+V +
Sbjct: 73 ETFEDNTDIYLVME 86
>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 79
Score = 52.7 bits (127), Expect = 3e-09
Identities = 9/54 (16%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK-VKDKNGSVGYIPSNYVKE 180
V F A + +++L++ V+ ++ W + ++G G+ P ++ +
Sbjct: 20 VEITKAFFAKQADEVTLQQADVVLVL-QQEDGWLYGERLRDGETGWFPEDFARF 72
Score = 34.6 bits (80), Expect = 0.008
Identities = 6/35 (17%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
V F A + +++L++ V+ ++ W
Sbjct: 20 VEITKAFFAKQADEVTLQQADVVLVL-QQEDGWLY 53
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure,
signaling protein; NMR {Homo sapiens}
Length = 68
Score = 52.2 bits (126), Expect = 3e-09
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 122 MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
M +P LY F+ G+L ++G + + E+W++ +G G+ P NYV+
Sbjct: 1 MDQPCCR-GLYDFEPENQGELGFKEGDIITLTNQIDENWYEGM-IHGESGFFPINYVEV 57
Score = 38.0 bits (89), Expect = 4e-04
Identities = 11/50 (22%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 69 MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
M +P LY F+ G+L ++G + + E+W++ + ++G
Sbjct: 1 MDQPCCR-GLYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGESGF 49
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 57.7 bits (140), Expect = 3e-09
Identities = 15/80 (18%), Positives = 37/80 (46%), Gaps = 10/80 (12%)
Query: 433 LLEELGSGQFGVVRRGKWRGS--------IDVAMMK--EGTMSEDDFIEEAKVMTRLQHQ 482
+ EELGSGQF +V++ + + + I + + ++ E ++ ++ H
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHP 75
Query: 483 NLVQLYGVCSKHRPIYIVTD 502
N++ L+ V + ++ +
Sbjct: 76 NIITLHDVYENRTDVVLILE 95
Score = 30.0 bits (68), Expect = 2.0
Identities = 9/46 (19%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
++NY ++D+W+ GV+ + + G P+ E + +
Sbjct: 189 IVNYEPLGLEADMWSIGVITY-ILLSGASPFLGDTKQETLANITAV 233
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 58.2 bits (141), Expect = 3e-09
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM------MKEGTMSEDDFIEEAKVMTRLQHQNLV 485
LG G FG V K + + + A+ + ++ + E +++ +L H N++
Sbjct: 30 GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 89
Query: 486 QLYGVCSKHRPIYIVTD 502
+LY Y+V +
Sbjct: 90 KLYEFFEDKGYFYLVGE 106
Score = 32.0 bits (73), Expect = 0.46
Identities = 11/50 (22%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 208 RFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
+ K DVW+ GV+++ + G P+ +++ +V++G + W
Sbjct: 203 TYDEKCDVWSTGVILYILL-SGCPPFNGANEYDILKKVEKGKYTFELPQW 251
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein;
2.05A {Homo sapiens} PDB: 2k6d_A
Length = 69
Score = 51.9 bits (125), Expect = 4e-09
Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVM--DDTQEHWWKVKDKNGSVGYIPSNYVKE 180
++P++A +L++++G ++ D WW+ + NG G P N+VK
Sbjct: 2 SDYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWE-GELNGRRGVFPDNFVKL 58
Score = 37.6 bits (88), Expect = 5e-04
Identities = 8/49 (16%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Query: 72 PKVVVALYPFKAIEGGDLSLEKGAEYEVM--DDTQEHWWK--VKDKNGI 116
++P++A +L++++G ++ D WW+ + + G+
Sbjct: 2 SDYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGV 50
>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3
domain, five-stranded barrel, mouse cDNA; NMR {Mus
musculus} SCOP: b.34.2.1
Length = 72
Score = 52.0 bits (125), Expect = 4e-09
Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Query: 124 RPKVVVALYPFKAIEGGD-LSLEKGAEYEVMDDTQEH-WWK-VKDKNGSVGYIPSNYVKE 180
+ V ++P A LS +G ++ ++ W D + G+ PS+Y K
Sbjct: 6 SGQKVKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKL 65
Score = 34.3 bits (79), Expect = 0.008
Identities = 9/50 (18%), Positives = 17/50 (34%), Gaps = 3/50 (6%)
Query: 71 RPKVVVALYPFKAIEGGD-LSLEKGAEYEVMDDTQEH-WWK-VKDKNGIR 117
+ V ++P A LS +G ++ ++ W D R
Sbjct: 6 SGQKVKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKAR 55
>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 76
Score = 51.6 bits (124), Expect = 6e-09
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
Query: 125 PKVVVALYPFKAIEG-------GDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNY 177
+ +VALY + E +L+ G V + E + + NG G +PSN+
Sbjct: 7 GRRMVALYDYDPRESSPNVDVEAELTFCTGDIITVFGEIDEDGFYYGELNGQKGLVPSNF 66
Query: 178 VKE 180
++E
Sbjct: 67 LEE 69
Score = 32.4 bits (74), Expect = 0.042
Identities = 9/44 (20%), Positives = 16/44 (36%), Gaps = 7/44 (15%)
Query: 72 PKVVVALYPFKAIEG-------GDLSLEKGAEYEVMDDTQEHWW 108
+ +VALY + E +L+ G V + E +
Sbjct: 7 GRRMVALYDYDPRESSPNVDVEAELTFCTGDIITVFGEIDEDGF 50
>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens}
Length = 85
Score = 52.1 bits (125), Expect = 6e-09
Identities = 11/55 (20%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEV--MDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
V+AL + LS +G ++ + + W G G P++ V+
Sbjct: 11 VIALRSYITDNCSLLSFHRGDLIKLLPVATLEPGWQFGS-AGGRSGLFPADIVQP 64
Score = 40.1 bits (94), Expect = 1e-04
Identities = 8/46 (17%), Positives = 18/46 (39%), Gaps = 4/46 (8%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEV--MDDTQEHWWK--VKDKNGI 116
V+AL + LS +G ++ + + W ++G+
Sbjct: 11 VIALRSYITDNCSLLSFHRGDLIKLLPVATLEPGWQFGSAGGRSGL 56
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 56.8 bits (137), Expect = 6e-09
Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 9/79 (11%)
Query: 433 LLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSE-DDFIEEAKVMTRLQHQN 483
L +G G +GVVR ++ +++ + + E ++M +L H N
Sbjct: 30 LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPN 89
Query: 484 LVQLYGVCSKHRPIYIVTD 502
+ +LY V + I +V +
Sbjct: 90 IARLYEVYEDEQYICLVME 108
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate
repeat-containing protein, structural genomics, NPPSFA;
NMR {Homo sapiens} PDB: 2kea_A
Length = 73
Score = 51.6 bits (124), Expect = 7e-09
Identities = 12/66 (18%), Positives = 18/66 (27%), Gaps = 1/66 (1%)
Query: 115 GIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIP 174
G V + + L L+KG +++ W N VG
Sbjct: 1 GSSGSSGFCGRARVHTDFTPSPYDTDSLKLKKGDIIDIISKPPMGTWMGL-LNNKVGTFK 59
Query: 175 SNYVKE 180
YV
Sbjct: 60 FIYVDV 65
Score = 33.9 bits (78), Expect = 0.013
Identities = 8/44 (18%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
V + + L L+KG +++ W + +K G
Sbjct: 14 VHTDFTPSPYDTDSLKLKKGDIIDIISKPPMGTWMGLLNNKVGT 57
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding,
duplication, repeat, SH3 domain, cytoskeleton, metal
binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1
PDB: 1tud_A
Length = 62
Score = 50.9 bits (122), Expect = 8e-09
Identities = 13/52 (25%), Positives = 30/52 (57%)
Query: 113 KNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 164
++K D ++V+ALY ++ +++++KG +++ T + WWKV+
Sbjct: 9 AAYVKKLDSGTGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVE 60
Score = 50.5 bits (121), Expect = 1e-08
Identities = 13/63 (20%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 49 KKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW 108
++ P++ ++ D ++V+ALY ++ +++++KG +++ T + WW
Sbjct: 3 RQGFVPAA-----YVKKLDSGTGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWW 57
Query: 109 KVK 111
KV+
Sbjct: 58 KVE 60
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces
cerevisiae} SCOP: b.34.2.1
Length = 58
Score = 50.2 bits (121), Expect = 1e-08
Identities = 12/54 (22%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVK-DKNGSVGYIPSNYVK 179
LY + + ++++ G + ++ DT W K+ D G G +P+ Y++
Sbjct: 4 NKVLYAYVQKDDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIR 57
Score = 32.5 bits (75), Expect = 0.022
Identities = 9/43 (20%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVK-DKNG 115
LY + + ++++ G + ++ DT W K+ D G
Sbjct: 4 NKVLYAYVQKDDDEITITPGDKISLVARDTGSGWTKINNDTTG 46
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 55.9 bits (135), Expect = 2e-08
Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 17/87 (19%)
Query: 433 LLEELGSGQFGVVRRG-----------------KWRGSIDVAMMKEGTMSEDDFIEEAKV 475
+ +LGSG +G V ++ K ++ E +
Sbjct: 40 KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISL 99
Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTD 502
+ L H N+++L+ V + Y+VT+
Sbjct: 100 LKSLDHPNIIKLFDVFEDKKYFYLVTE 126
Score = 30.4 bits (69), Expect = 1.4
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 208 RFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
+++ K DVW+ GV+M+ + CG P+G + +++ +V++G W
Sbjct: 223 KYNEKCDVWSCGVIMY-ILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDW 271
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 75
Score = 50.5 bits (121), Expect = 2e-08
Identities = 11/64 (17%), Positives = 24/64 (37%), Gaps = 7/64 (10%)
Query: 124 RPKVVVALYPFKAIEG-------GDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSN 176
K+++A + +G G L+L G V + + + G G +P++
Sbjct: 6 SGKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQGFYYGELGGHRGLVPAH 65
Query: 177 YVKE 180
+
Sbjct: 66 LLDH 69
Score = 30.8 bits (70), Expect = 0.14
Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 7/54 (12%)
Query: 71 RPKVVVALYPFKAIEG-------GDLSLEKGAEYEVMDDTQEHWWKVKDKNGIR 117
K+++A + +G G L+L G V + + + G R
Sbjct: 6 SGKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQGFYYGELGGHR 59
>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1;
IRTKS-SH3, espfu, complex structure, protein binding;
NMR {Homo sapiens}
Length = 67
Score = 50.0 bits (120), Expect = 2e-08
Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 121 QMIRPKVVVALYPFKAIEGGD-LSLEKGAEYEVM-DDTQEHWWK-VKDKNGSVGYIPSNY 177
++ + V ++P A LS +G ++ + ++ W D + + G+ PS+Y
Sbjct: 2 SHMKKQKVKTIFPHTAGSNKTLLSFAQGDVITLLIPEEKDGWLYGEHDVSKARGWFPSSY 61
Query: 178 VK 179
K
Sbjct: 62 TK 63
Score = 33.8 bits (78), Expect = 0.010
Identities = 9/53 (16%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 68 QMIRPKVVVALYPFKAIEGGD-LSLEKGAEYEVM-DDTQEHWWK-VKDKNGIR 117
++ + V ++P A LS +G ++ + ++ W D + R
Sbjct: 2 SHMKKQKVKTIFPHTAGSNKTLLSFAQGDVITLLIPEEKDGWLYGEHDVSKAR 54
>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding
protein G; sortase, protein ligation, intein, inset,
solubility enhancement; NMR {Mus musculus}
Length = 142
Score = 52.0 bits (124), Expect = 2e-08
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVKDKNGSVGYIPSNYVKE 180
A Y F A + +LSL++G ++++ Q+ WW+ + G +G+ PSNYV+E
Sbjct: 8 AKARYDFCARDRSELSLKEGDIIKILNKKGQQGWWR-GEIYGRIGWFPSNYVEE 60
Score = 39.3 bits (91), Expect = 6e-04
Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWK--VKDKNGI 116
A Y F A + +LSL++G ++++ Q+ WW+ + + G
Sbjct: 8 AKARYDFCARDRSELSLKEGDIIKILNKKGQQGWWRGEIYGRIGW 52
>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on
protein structural and functional analyses; NMR {Homo
sapiens}
Length = 88
Score = 50.6 bits (121), Expect = 2e-08
Identities = 16/64 (25%), Positives = 23/64 (35%), Gaps = 3/64 (4%)
Query: 119 PDQMIRPKVVVAL--YPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSN 176
P P A+ A + L+LE G +V W+ + NG G P
Sbjct: 10 PSTQNGPVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEGE-VNGRKGLFPFT 68
Query: 177 YVKE 180
+VK
Sbjct: 69 HVKI 72
Score = 34.4 bits (79), Expect = 0.011
Identities = 12/55 (21%), Positives = 19/55 (34%), Gaps = 4/55 (7%)
Query: 66 PDQMIRPKVVVAL--YPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
P P A+ A + L+LE G +V W+ V + G+
Sbjct: 10 PSTQNGPVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEGEVNGRKGL 64
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling
protein; NMR {Homo sapiens}
Length = 67
Score = 49.6 bits (119), Expect = 3e-08
Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Query: 125 PKVVVALYPF--KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
P + A + L+LE G +V W+ + NG G+ P +V+
Sbjct: 6 PIYARVIQKRVPNAYDKTALALEVGELVKVTKINVSGQWEGE-CNGKRGHFPFTHVRL 62
Score = 33.8 bits (78), Expect = 0.010
Identities = 10/49 (20%), Positives = 15/49 (30%), Gaps = 4/49 (8%)
Query: 72 PKVVVALYPF--KAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
P + A + L+LE G +V W+ K G
Sbjct: 6 PIYARVIQKRVPNAYDKTALALEVGELVKVTKINVSGQWEGECNGKRGH 54
>2el8_A Signal-transducing adaptor protein 2; SH2 domain, phosphotyrosine
binding domain, protein tyrosine kinase, signal
transduction, structural genomics; NMR {Homo sapiens}
Length = 118
Score = 50.9 bits (121), Expect = 3e-08
Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Query: 251 LEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPH-VKHYH 308
LE P +SR A+ +L++ + G ++R S +++ H V+HY
Sbjct: 19 LETP--SCFLKVSRLEAQLLLERYPECGNLLLRPSGDGADGVSVTTRQMHNGTHVVRHYK 76
Query: 309 IKQNSRGEFFLSEK-HCCHSIPEV 331
+K+ E+ C S+ V
Sbjct: 77 VKREGPKYVIDVEQPFSCTSLDAV 100
Score = 43.6 bits (102), Expect = 1e-05
Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Query: 334 KEGCFVVRNSST-KGLYTLSLYTKVPHPH-VKHYHIKQNSRGEFFLSEK-HCCHSIPEVV 390
+ G ++R S +++ H V+HY +K+ E+ C S+ VV
Sbjct: 42 ECGNLLLRPSGDGADGVSVTTRQMHNGTHVVRHYKVKREGPKYVIDVEQPFSCTSLDAVV 101
Query: 391 NYHRHNSGGL 400
NY ++
Sbjct: 102 NYFVSHTKKA 111
>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication,
repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus}
SCOP: b.34.2.1
Length = 63
Score = 49.3 bits (118), Expect = 3e-08
Identities = 13/41 (31%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 140 GDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
+++++KG +++ T + WWKV+ N G++P+ YVK+
Sbjct: 4 REVTMKKGDILTLLNSTNKDWWKVE-VNDRQGFVPAAYVKK 43
Score = 38.9 bits (91), Expect = 1e-04
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
Query: 87 GDLSLEKGAEYEVMDDTQEHWWKVK--DKNGI------RKPDQMIRPKVVVALYPFKA 136
+++++KG +++ T + WWKV+ D+ G +K D ++V+ALY ++
Sbjct: 4 REVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDSGTGKELVLALYDYQE 61
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 53.8 bits (130), Expect = 4e-08
Identities = 15/75 (20%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
Query: 435 EELGSGQFGVVRRGKWRGS-IDVAM-----MKEGTMSEDDFIEEAKVMTRLQHQ-NLVQL 487
+ELG G+F VVR+ + + + A + G + + E V+ + ++ L
Sbjct: 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINL 94
Query: 488 YGVCSKHRPIYIVTD 502
+ V I ++ +
Sbjct: 95 HEVYENTSEIILILE 109
Score = 28.8 bits (65), Expect = 4.1
Identities = 9/46 (19%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
+LNY ++ +D+W G++ + + P+ N E + +
Sbjct: 204 ILNYDPITTATDMWNIGIIAY-MLLTHTSPFVGEDNQETYLNISQV 248
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural
genomics, structural genomics consortium, SGC, BE
barrel; HET: EDT; 1.50A {Homo sapiens}
Length = 67
Score = 48.9 bits (117), Expect = 5e-08
Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 125 PKVVVALYPFKAIEGGD-LSLEKGAEYEVM-DDTQEHWWK-VKDKNGSVGYIPSNYVK 179
V A++ A + LS ++G ++ + ++ W +K G+ P +Y +
Sbjct: 7 RMRVKAIFSHAAGDNSTLLSFKEGDLITLLVPEARDGWHYGESEKTKMRGWFPFSYTR 64
Score = 32.7 bits (75), Expect = 0.031
Identities = 9/49 (18%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 72 PKVVVALYPFKAIEGGD-LSLEKGAEYEVM-DDTQEHWWK-VKDKNGIR 117
V A++ A + LS ++G ++ + ++ W +K +R
Sbjct: 7 RMRVKAIFSHAAGDNSTLLSFKEGDLITLLVPEARDGWHYGESEKTKMR 55
>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus}
SCOP: b.34.2.1
Length = 78
Score = 49.2 bits (117), Expect = 6e-08
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 117 RKPDQMIRPKVVV-----ALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVKD-KNGS 169
+K +++ PK+ V + P GG L L G E+ + + +WW+ ++
Sbjct: 5 KKRNELGLPKMEVFQEYYGIPPPPGAFGGFLRLNPGDIVELTKAEAEHNWWEGRNTATNE 64
Query: 170 VGYIPSNYVKE 180
VG+ P N V
Sbjct: 65 VGWFPCNRVHP 75
Score = 31.1 bits (70), Expect = 0.12
Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 6/45 (13%)
Query: 71 RPKVVV-----ALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWK 109
PK+ V + P GG L L G E+ + + +WW+
Sbjct: 12 LPKMEVFQEYYGIPPPPGAFGGFLRLNPGDIVELTKAEAEHNWWE 56
>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 94
Score = 49.0 bits (117), Expect = 9e-08
Identities = 12/60 (20%), Positives = 21/60 (35%), Gaps = 5/60 (8%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH----WWK-VKDKNGSVGYIPSNYVKE 180
+ + +YP+ +L L G + Q W G G +P NY+ +
Sbjct: 17 ETLQVIYPYTPQNDDELELVPGDFIFMSPMEQTSTSEGWIYGTSLTTGCSGLLPENYITK 76
Score = 32.1 bits (73), Expect = 0.085
Identities = 7/41 (17%), Positives = 13/41 (31%), Gaps = 4/41 (9%)
Query: 73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH----WWK 109
+ + +YP+ +L L G + Q W
Sbjct: 17 ETLQVIYPYTPQNDDELELVPGDFIFMSPMEQTSTSEGWIY 57
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative
splicing, coiled coil, cytoplasmic vesicle, endocytosis,
phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Length = 486
Score = 53.2 bits (126), Expect = 1e-07
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 108 WKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH-WWKVKDK 166
D N V ALY ++ E +LS + G E M+D E W K +
Sbjct: 411 DANGDSNPFDDDATSGTEVRVRALYDYEGQEHDELSFKAGDELTKMEDEDEQGWCKGRLD 470
Query: 167 NGSVGYIPSNYVKEKE 182
NG VG P+NYV+ +
Sbjct: 471 NGQVGLYPANYVEAIQ 486
Score = 34.8 bits (78), Expect = 0.061
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 77 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEH-WWKVKDKNG 115
ALY ++ E +LS + G E M+D E W K + NG
Sbjct: 433 ALYDYEGQEHDELSFKAGDELTKMEDEDEQGWCKGRLDNG 472
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export;
2.5A {Homo sapiens} PDB: 2bzx_A
Length = 67
Score = 46.9 bits (112), Expect = 3e-07
Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
+ A + L+LE G +V W+ + NG G P +VK
Sbjct: 6 AIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEGE-VNGRKGLFPFTHVKI 57
Score = 31.9 bits (73), Expect = 0.050
Identities = 9/44 (20%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
+ A + L+LE G +V W+ V + G+
Sbjct: 6 AIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEGEVNGRKGL 49
>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex,
DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich
sequence, cytoskeleton; 2.10A {Homo sapiens}
Length = 184
Score = 49.3 bits (117), Expect = 4e-07
Identities = 13/61 (21%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNGSVGYIPSNYVKEK 181
+ + VA+Y F+ LSL+ G + + W++ G P +++ K
Sbjct: 16 KERHGVAIYNFQGSGAPQLSLQIGDVVRIQETC-GDWYRGYLIKHKMLQGIFPKSFIHIK 74
Query: 182 E 182
E
Sbjct: 75 E 75
Score = 39.3 bits (91), Expect = 0.001
Identities = 14/86 (16%), Positives = 29/86 (33%), Gaps = 3/86 (3%)
Query: 71 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVA 130
+ + VA+Y F+ LSL+ G + + W++ I PK +
Sbjct: 16 KERHGVAIYNFQGSGAPQLSLQIGDVVRIQETC-GDWYRGYLIKHKMLQG--IFPKSFIH 72
Query: 131 LYPFKAIEGGDLSLEKGAEYEVMDDT 156
+ + + AE + +
Sbjct: 73 IKEVTVEKRRNTENIIPAEIPLAQEV 98
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 50.3 bits (121), Expect = 5e-07
Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 14/84 (16%)
Query: 433 LLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMS-----EDDFIEEAKVMTRL 479
E LG G VVRR + IDV + + ++E ++ ++
Sbjct: 21 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV 80
Query: 480 -QHQNLVQLYGVCSKHRPIYIVTD 502
H N++QL + ++V D
Sbjct: 81 SGHPNIIQLKDTYETNTFFFLVFD 104
>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus}
SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B
Length = 115
Score = 47.4 bits (112), Expect = 5e-07
Identities = 12/69 (17%), Positives = 25/69 (36%), Gaps = 14/69 (20%)
Query: 128 VVALYPFKAIEGGDLSLEKG-----AEYEVMDDTQEHWWK---------VKDKNGSVGYI 173
V A + + A + +L L+ G ++ ++ E W K+ G
Sbjct: 47 VQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVF 106
Query: 174 PSNYVKEKE 182
P N+ + +
Sbjct: 107 PENFTERVQ 115
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 50.9 bits (122), Expect = 5e-07
Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 13/83 (15%)
Query: 433 LLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSEDDFIE----EAKVMTRL- 479
+ +G G VVRR R ++V + ++ E E ++ ++
Sbjct: 98 PKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVA 157
Query: 480 QHQNLVQLYGVCSKHRPIYIVTD 502
H +++ L +++V D
Sbjct: 158 GHPHIITLIDSYESSSFMFLVFD 180
>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase,
oxidoreductase; HET: CAF; 3.15A {Homo sapiens}
Length = 341
Score = 50.8 bits (120), Expect = 5e-07
Identities = 14/83 (16%), Positives = 28/83 (33%), Gaps = 2/83 (2%)
Query: 97 YEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDT 156
+ D+M P+ AL+ F +L+ + G ++
Sbjct: 147 QALRRLRPRTRKVKSVSPQGNSVDRMAAPRAE-ALFDFTGNSKLELNFKAGDVIFLLSRI 205
Query: 157 QEHWWKVKDKNGSVGYIPSNYVK 179
+ W + G+ G P ++VK
Sbjct: 206 NKDWLEGT-VRGATGIFPLSFVK 227
Score = 37.7 bits (86), Expect = 0.007
Identities = 8/53 (15%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
Query: 66 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKV--KDKNGI 116
+ AL+ F +L+ + G ++ + W + + GI
Sbjct: 168 SVDRMAAPRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGI 220
>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical
protein BAA76854.1, riken structural genomics/proteomics
initiative RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Length = 92
Score = 46.5 bits (110), Expect = 8e-07
Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDT----QEHWWKVKDKNGSVGYIPSNYVK 179
K+ A F A + D+SL +G V+ ++ W + D + G++ S+++K
Sbjct: 17 EKLFQAERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLI-DNGVTKGFVYSSFLK 74
Score = 30.7 bits (69), Expect = 0.23
Identities = 10/45 (22%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
Query: 72 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDT----QEHWWKVKD 112
K+ A F A + D+SL +G V+ ++ W + +
Sbjct: 17 EKLFQAERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDN 61
>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein,
protein binding; NMR {Homo sapiens}
Length = 83
Score = 46.0 bits (109), Expect = 8e-07
Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 6/58 (10%)
Query: 128 VVALYPFK-AIEGGDLSLEKGAEYEVMDDTQEHWWK-----VKDKNGSVGYIPSNYVK 179
V AL F + L++ G V++ + WK + +GY P V+
Sbjct: 21 VRALKDFWNLHDPTALNVRAGDVITVLEQHPDGRWKGHIHESQRGTDRIGYFPPGIVE 78
Score = 32.5 bits (74), Expect = 0.051
Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 75 VVALYPFK-AIEGGDLSLEKGAEYEVMDDTQEHWWK 109
V AL F + L++ G V++ + WK
Sbjct: 21 VRALKDFWNLHDPTALNVRAGDVITVLEQHPDGRWK 56
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 49.6 bits (119), Expect = 1e-06
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 419 LSHDKWEIDPAEL-MLLEELGSGQFGVVRRGKWRGSIDVAMMK----EGTMSEDDFIEEA 473
H + ++DP E+ ++ ELG G FG V + K + + +A K + +D+I E
Sbjct: 8 YEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEI 67
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIV 500
+++ H +V+L G ++I+
Sbjct: 68 EILATCDHPYIVKLLGAYYHDGKLWIM 94
Score = 29.6 bits (67), Expect = 2.0
Identities = 9/46 (19%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETK 49
G++ + + L + +C Q+ + + +L IHR+ K
Sbjct: 101 GAVDAIMLELDRGL--TEPQIQVVCRQMLEALNFLHSKRIIHRDLK 144
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 50.6 bits (120), Expect = 1e-06
Identities = 70/506 (13%), Positives = 130/506 (25%), Gaps = 187/506 (36%)
Query: 38 LERHNY------IHRETKKSLYPSSLNEISFI-----LW-------PDQMIRPKVVV--- 76
+ R NY I E ++ S+ +I L+ + R + +
Sbjct: 86 VLRINYKFLMSPIKTEQRQP----SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLR 141
Query: 77 -ALY-----PFKAIEG----G----------DLSLEKGAEYEVMDDTQEHWWKVK----- 111
AL I+G G ++ ++++ W +K
Sbjct: 142 QALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKI------FWLNLKNCNSP 195
Query: 112 --------------DKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYE----VM 153
D N + D K +I+ L K YE V+
Sbjct: 196 ETVLEMLQKLLYQIDPNWTSRSDHSSNIK-----LRIHSIQAELRRLLKSKPYENCLLVL 250
Query: 154 DDTQEHW-WKV-----------KDKN-------GSVGYIPSNYVK----EKELLGL---- 186
+ Q W + K + +I ++ E+ L
Sbjct: 251 LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY 310
Query: 187 --QKYDD-------VNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLK 237
+ D N L +I + + + D W + V ++ T + L+
Sbjct: 311 LDCRPQDLPREVLTTNPRRLSIIAESIR--DGLATWDNWKH-VNCDKLTTIIESSLNVLE 367
Query: 238 NTEVVDRVQRGIILEK----PKA-----WYVGDMSRQRAESILKQEDKEGCFVVRN--SS 286
E R + P W D+ + ++ + K V + S
Sbjct: 368 PAEYRKMFDRLSVFPPSAHIPTILLSLIW--FDVIKSDVMVVVNKLHKYSL-VEKQPKES 424
Query: 287 TKGLYTLSLYTKVPHPHVK--H--------------------------------YHIKQN 312
T + ++ L KV + H +H+K
Sbjct: 425 TISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNI 484
Query: 313 SRGE----F--------FLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHP 360
E F FL +K ++ + S L L Y
Sbjct: 485 EHPERMTLFRMVFLDFRFLEQK--------IRHDSTAWNASGSILNTLQQLKFYKPYICD 536
Query: 361 HVKHYHIKQNSRGEFFLS-EKHCCHS 385
+ Y N+ +F E++ S
Sbjct: 537 NDPKYERLVNAILDFLPKIEENLICS 562
Score = 33.7 bits (76), Expect = 0.18
Identities = 30/212 (14%), Positives = 57/212 (26%), Gaps = 68/212 (32%)
Query: 301 HPHVKHYHIKQNSRGEFFLSE-KHCCHSIPEV------KDKEGCFVVRNSSTKGLYTLSL 353
H H H+H+ +F E ++ I V + + C V++ K + +
Sbjct: 1 HHH--HHHM------DFETGEHQYQYKDILSVFEDAFVDNFD-CKDVQDM-PKSILSKEE 50
Query: 354 YTKV---PHPHVKHYHI------KQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRL 404
+ + KQ + F V R N L S +
Sbjct: 51 IDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKF------------VEEVLRINYKFLMSPI 98
Query: 405 KTSPCDRPVPATAGLS-HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT 463
KT + + D+ D ++ V R
Sbjct: 99 KTEQRQPSMMTRMYIEQRDRLYNDNQVFA--------KYNVSR----------------- 133
Query: 464 MSEDDFIEEAKVMTRLQHQNLVQLYGV--CSK 493
+++ + + L+ V + GV K
Sbjct: 134 --LQPYLKLRQALLELRPAKNVLIDGVLGSGK 163
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural
prote intermediate filament, crosslinking; 2.95A {Homo
sapiens}
Length = 283
Score = 49.3 bits (117), Expect = 1e-06
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 117 RKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPS 175
M ++A+ +K +E +++ KG E +++ Q WKV +GS +PS
Sbjct: 190 HPAHPMRGRLPLLAVCDYKQVE---VTVHKGDECQLVGPAQPSHWKVLSSSGSEAAVPS 245
Score = 41.6 bits (97), Expect = 4e-04
Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 66 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
M ++A+ +K +E +++ KG E +++ Q WKV +G
Sbjct: 192 AHPMRGRLPLLAVCDYKQVE---VTVHKGDECQLVGPAQPSHWKVLSSSG 238
>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain,
hormone/growth factor complex; 1.39A {Homo sapiens}
SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A
Length = 108
Score = 45.8 bits (108), Expect = 2e-06
Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 10/67 (14%)
Query: 128 VVALYPFKAIEGGDLSLEKGAE---YEVMDDTQEHWWKV-------KDKNGSVGYIPSNY 177
VAL + A + L++ +G + + +W D +GY PS+
Sbjct: 25 AVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSI 84
Query: 178 VKEKELL 184
V+E + L
Sbjct: 85 VREDQTL 91
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 48.8 bits (117), Expect = 2e-06
Identities = 16/84 (19%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS-IDVAMMKEGTMSEDDFIEEAKVMTRL 479
+ +++D + + LG G F + R+ + S A+ E + +E +
Sbjct: 7 YQHYDLDLKD----KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLC 62
Query: 480 Q-HQNLVQLYGVCSKHRPIYIVTD 502
+ H N+V+L+ V ++V +
Sbjct: 63 EGHPNIVKLHEVFHDQLHTFLVME 86
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 47.7 bits (114), Expect = 4e-06
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Query: 435 EELGSGQFGVVRRGKWRGS-IDVAM--MKEGTMSEDD---FIEEAKVMTRLQHQNLVQLY 488
E+G G F V +G + ++VA +++ +++ + F EEA+++ LQH N+V+ Y
Sbjct: 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFY 91
Query: 489 G----VCSKHRPIYIVT 501
+ I +VT
Sbjct: 92 DSWESTVKGKKCIVLVT 108
Score = 32.3 bits (74), Expect = 0.35
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNY--IHRETK 49
M G+L YL+R + + +L C Q+ KG+ +L IHR+ K
Sbjct: 111 MTSGTLKTYLKRFKVM---KIKVLRSWCRQILKGLQFLHTRTPPIIHRDLK 158
Score = 30.0 bits (68), Expect = 1.6
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
Query: 198 ELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN 238
E+ + Y DV+A+G+ M E+ T + PY +N
Sbjct: 200 EMYEE--KYDE---SVDVYAFGMCMLEMAT-SEYPYSECQN 234
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 47.9 bits (114), Expect = 4e-06
Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 14/93 (15%)
Query: 416 TAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS-IDVAM---MKEGTMSEDDFIE 471
+ S+ W + + LG G V RG+ + + A+ + D
Sbjct: 3 SQSTSNHLWLLS-------DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQM 55
Query: 472 -EAKVMTRLQHQNLVQLYGV--CSKHRPIYIVT 501
E +V+ +L H+N+V+L+ + + R ++
Sbjct: 56 REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88
Score = 35.2 bits (81), Expect = 0.050
Identities = 14/46 (30%), Positives = 18/46 (39%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETK 49
GSL L N G L + V GM +L + +HR K
Sbjct: 94 GSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIK 139
Score = 27.9 bits (62), Expect = 9.2
Identities = 13/71 (18%), Positives = 23/71 (32%), Gaps = 1/71 (1%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDMSRQRAE 268
+ + D+W+ GV + G +P+ + V II KP G +
Sbjct: 200 YGATVDLWSIGVTFYHAA-TGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGP 258
Query: 269 SILKQEDKEGC 279
+ C
Sbjct: 259 IDWSGDMPVSC 269
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 47.4 bits (113), Expect = 5e-06
Identities = 18/94 (19%), Positives = 38/94 (40%), Gaps = 14/94 (14%)
Query: 415 ATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS-IDVAM---MKEGTMSEDDFI 470
+ S+ W + + LG G V RG+ + + A+ + D
Sbjct: 2 GSQSTSNHLWLLS-------DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ 54
Query: 471 E-EAKVMTRLQHQNLVQLYGV--CSKHRPIYIVT 501
E +V+ +L H+N+V+L+ + + R ++
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88
Score = 35.1 bits (81), Expect = 0.046
Identities = 14/46 (30%), Positives = 18/46 (39%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETK 49
GSL L N G L + V GM +L + +HR K
Sbjct: 94 GSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIK 139
Score = 27.8 bits (62), Expect = 8.9
Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDMSRQRAE 268
+ + D+W+ GV + G +P+ + V II KP G +
Sbjct: 200 YGATVDLWSIGVTFYHAA-TGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGP 258
Query: 269 SILKQEDKEGCFVVRNSS 286
+ C + R
Sbjct: 259 IDWSGDMPVSCSLSRGLQ 276
>2cr4_A 3BP-2, SH3 domain-binding protein 2; structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 126
Score = 44.7 bits (105), Expect = 5e-06
Identities = 18/86 (20%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Query: 251 LEKPKAWYVGDMSRQRAESILKQED-----KEGCFVVRNSSTKGLYTLSLYTKVPHPHVK 305
+ P + +V E + K ++G + +RNSSTK L ++ + + V+
Sbjct: 13 VPLPNSVFVNTTESCEVERLFKATSPRGEPQDGLYCIRNSSTKSGKVLVVWDETSN-KVR 71
Query: 306 HYHIKQNSRGEFFLSEKHCCHSIPEV 331
+Y I + +F+L + S+ +
Sbjct: 72 NYRIFEK-DSKFYLEGEVLFVSVGSM 96
Score = 40.1 bits (93), Expect = 3e-04
Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 9/123 (7%)
Query: 296 YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYT 355
Y KVP P + E E+ + P + ++G + +RNSSTK L ++
Sbjct: 10 YEKVPLP--NSVFVNTTESCE---VERLFKATSPRGEPQDGLYCIRNSSTKSGKVLVVWD 64
Query: 356 KVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVN-YHRHNSGGLASRLKTSPCDRP-V 413
+ + V++Y I + +F+L + S+ +V YH H S L P
Sbjct: 65 ETSN-KVRNYRIFEK-DSKFYLEGEVLFVSVGSMVEHYHTHVLPSHQSLLLRHPYGYTSG 122
Query: 414 PAT 416
P++
Sbjct: 123 PSS 125
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 47.3 bits (113), Expect = 6e-06
Identities = 20/116 (17%), Positives = 39/116 (33%), Gaps = 14/116 (12%)
Query: 394 RHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS 453
+ + P P + + I +++G GQF V R
Sbjct: 4 QSQGMQGPPVPQFQPQKALRPDMGYNTLANFRI-------EKKIGRGQFSEVYRAACLLD 56
Query: 454 IDVAMMKE----GTMSE---DDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
+K+ M D I+E ++ +L H N+++ Y + + IV +
Sbjct: 57 GVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 112
>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV,
signaling protein/signaling protein complex; 1.68A {Mus
musculus} SCOP: b.34.2.1 PDB: 1gcp_A
Length = 70
Score = 43.0 bits (101), Expect = 7e-06
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 7/62 (11%)
Query: 125 PKVVV-----ALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVKD-KNGSVGYIPSNY 177
PK+ V + P G L L G E+ + + +WW+ ++ VG+ P N
Sbjct: 5 PKMEVFQEYYGIPPPPGAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNR 64
Query: 178 VK 179
V
Sbjct: 65 VH 66
Score = 26.5 bits (58), Expect = 4.4
Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 6/44 (13%)
Query: 72 PKVVV-----ALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWK 109
PK+ V + P G L L G E+ + + +WW+
Sbjct: 5 PKMEVFQEYYGIPPPPGAFGPFLRLNPGDIVELTKAEAEHNWWE 48
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 46.9 bits (112), Expect = 8e-06
Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 13/82 (15%)
Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM-----------MKEGTMSEDDFIEEAKVMTRLQ 480
+ + LGSG G V+ R + VA+ + E +++ +L
Sbjct: 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 481 HQNLVQLYGVCSKHRPIYIVTD 502
H ++++ YIV +
Sbjct: 74 HPCIIKIKNFFDAED-YYIVLE 94
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome;
2.95A {Homo sapiens}
Length = 450
Score = 47.4 bits (112), Expect = 8e-06
Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 117 RKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPS 175
+ +P ++ AL +K + + KG E + D+ + W V G +PS
Sbjct: 275 NPDYRSNKPIILRALCDYKQDQ---KIVHKGDECILKDNNERSKWYVTGPGGVDMLVPS 330
Score = 39.3 bits (91), Expect = 0.002
Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Query: 66 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRK 118
+ +P ++ AL +K + + KG E + D+ + W V G+
Sbjct: 277 DYRSNKPIILRALCDYKQDQ---KIVHKGDECILKDNNERSKWYVTGPGGVDM 326
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 46.5 bits (111), Expect = 9e-06
Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
Query: 435 EELGSGQFGVVRRGKWRGS-IDVAM---MKEGTMSEDDFIEEAKVMTRLQ-HQNLVQLYG 489
+ LG G V+ + + A+ K+ E +++ + Q H+N+++L
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 490 VCSKHRPIYIVTD 502
+ Y+V +
Sbjct: 79 FFEEEDRFYLVFE 91
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 46.5 bits (111), Expect = 9e-06
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Query: 420 SHDKWEIDPAEL-MLLEELGSGQFGVVRRGKWRGSIDVAMMK-----EGTMSEDDFIEEA 473
+ DP EL LE++G G FG V +G + V +K E +D +E
Sbjct: 12 GMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEI 71
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIV 500
V+++ + + YG K ++I+
Sbjct: 72 TVLSQCDSPYVTKYYGSYLKDTKLWII 98
Score = 28.4 bits (64), Expect = 5.4
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 27 MCIQVCKGMAYLERHNYIHRETK 49
+ ++ KG+ YL IHR+ K
Sbjct: 124 ILREILKGLDYLHSEKKIHRDIK 146
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 46.9 bits (112), Expect = 9e-06
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAMMKEGTMSEDDFIEEAKVMTRL-QHQNLVQLYGV 490
+ E++G G + V +R + + ++ A +K S+ D EE +++ R QH N++ L V
Sbjct: 26 VKEDIGVGSYSVCKRCIHKATNMEFA-VKIIDKSKRDPTEEIEILLRYGQHPNIITLKDV 84
Query: 491 CSKHRPIYIVTD 502
+ +Y+VT+
Sbjct: 85 YDDGKYVYVVTE 96
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 46.6 bits (111), Expect = 1e-05
Identities = 27/119 (22%), Positives = 47/119 (39%), Gaps = 22/119 (18%)
Query: 390 VNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGK 449
+++H H+S G+ D S +K+ L+++G G FG K
Sbjct: 1 MHHHHHHSSGV---------DLGTENLYFQSMEKYVR-------LQKIGEGSFGKAILVK 44
Query: 450 WRGSIDVAMMKE---GTMSEDD---FIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
++KE MS + E V+ ++H N+VQ ++ +YIV D
Sbjct: 45 STEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103
Score = 29.3 bits (66), Expect = 2.8
Identities = 10/41 (24%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 210 SSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGII 250
++KSD+WA G +++E+ K + +V ++ G
Sbjct: 203 NNKSDIWALGCVLYEL-CTLKHAFEAGSMKNLVLKIISGSF 242
Score = 28.1 bits (63), Expect = 6.6
Identities = 10/50 (20%), Positives = 20/50 (40%), Gaps = 9/50 (18%)
Query: 4 GSLLNYLRRHENTLGGNVGL----LLDMCIQVCKGMAYLERHNYIHRETK 49
G L + + L +LD +Q+C + ++ +HR+ K
Sbjct: 108 GDLFKRINAQKGVL-----FQEDQILDWFVQICLALKHVHDRKILHRDIK 152
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 46.6 bits (111), Expect = 1e-05
Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 13/82 (15%)
Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM-----------MKEGTMSEDDFIEEAKVMTRLQ 480
+ + LGSG G V+ R + VA+ + E +++ +L
Sbjct: 139 MSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN 198
Query: 481 HQNLVQLYGVCSKHRPIYIVTD 502
H ++++ YIV +
Sbjct: 199 HPCIIKIKNFFDAED-YYIVLE 219
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 46.3 bits (110), Expect = 1e-05
Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 9/73 (12%)
Query: 435 EELGSGQFG-VVRRGKWRGSIDVA---MMKEGTMSEDDFIEEAKVMTRL-QHQNLVQLYG 489
+ LG G G +V RG + DVA ++ E E +++ +H N+++ +
Sbjct: 30 DVLGHGAEGTIVYRGMFDNR-DVAVKRILPE---CFSFADREVQLLRESDEHPNVIRYFC 85
Query: 490 VCSKHRPIYIVTD 502
+ YI +
Sbjct: 86 TEKDRQFQYIAIE 98
Score = 34.0 bits (78), Expect = 0.11
Identities = 8/60 (13%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Query: 198 ELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
E++ + + D+++ G + + V + G P+G+ + + L+
Sbjct: 196 EMLSEDCK-ENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGAC-SLDCLHPE 253
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 45.8 bits (109), Expect = 2e-05
Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 402 SRLKTSPCDRPVPATAGLSHDKWEIDPAEL-MLLEELGSGQFGVVRRGKWRGSIDVAMMK 460
S + P L D P E+ +LE+LG G +G V + + + + +K
Sbjct: 1 SLETVQLRNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIK 60
Query: 461 EGTMSED--DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIV 500
+ + D + I+E +M + ++V+ YG K+ ++IV
Sbjct: 61 QVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIV 102
Score = 29.6 bits (67), Expect = 2.6
Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETK 49
GS+ + +R TL + + KG+ YL IHR+ K
Sbjct: 109 GSVSDIIRLRNKTL--TEDEIATILQSTLKGLEYLHFMRKIHRDIK 152
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 45.9 bits (109), Expect = 2e-05
Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 12/81 (14%)
Query: 433 LLEELGSGQFGVVRRGKWRGS--------IDVAMMKEGTMSEDDFIE----EAKVMTRLQ 480
+ LGSG FG V + I + E ED + E +++R++
Sbjct: 28 TMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVE 87
Query: 481 HQNLVQLYGVCSKHRPIYIVT 501
H N++++ + +V
Sbjct: 88 HANIIKVLDIFENQGFFQLVM 108
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 45.9 bits (109), Expect = 2e-05
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 435 EELGSGQFG-VVRRGKWRGSIDVA---MMKEGTMSEDDFIEEAKVMTRL-QHQNLVQLYG 489
+ LG G G VV +G ++G VA M+ + D + E K++T H N+++ Y
Sbjct: 21 KILGYGSSGTVVFQGSFQGR-PVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYC 76
Query: 490 VCSKHRPIYIVTD 502
+ R +YI +
Sbjct: 77 SETTDRFLYIALE 89
Score = 29.8 bits (67), Expect = 2.7
Identities = 12/61 (19%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Query: 197 LELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
LE + + R + D+++ G + + + + GK P+G + RGI
Sbjct: 204 LEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD--KYSRESNIIRGIFSLDEMK 261
Query: 257 W 257
Sbjct: 262 C 262
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex,
layered beta- sheets, transferas; HET: SEP TPO; 3.20A
{Solanum pimpinellifolium} PDB: 3hgk_A*
Length = 321
Score = 45.3 bits (108), Expect = 3e-05
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 437 LGSGQFGVVRRGKWRGSIDVA---MMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVC 491
+G G FG V +G R VA E + ++F E + ++ +H +LV L G C
Sbjct: 47 IGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC 104
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 45.4 bits (108), Expect = 3e-05
Identities = 20/96 (20%), Positives = 36/96 (37%), Gaps = 9/96 (9%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSED-----DFIEEAKVM 476
W+ +L L E+G G +G V + + S + +K + D + + V+
Sbjct: 15 QHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVV 74
Query: 477 TRL-QHQNLVQLYGVCSKHRPIYIVT---DTSSFRL 508
R +VQ YG + +I TS +
Sbjct: 75 MRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKF 110
>1u3o_A Huntingtin-associated protein-interacting protein; SH3,
CIS-proline,, signaling protein; NMR {Rattus norvegicus}
Length = 82
Score = 41.5 bits (97), Expect = 3e-05
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH--WWKVKDKNGS---VGYIPSNYVK 179
++ V L F A +LS++ G E+++ E W V+ S G +PS+ +
Sbjct: 17 CELTVVLQDFSAAHSSELSIQVGQTVELLERPSERPGWCLVRTTERSPPQEGLVPSSTLC 76
Score = 35.0 bits (80), Expect = 0.005
Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 72 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH--WWKVK 111
++ V L F A +LS++ G E+++ E W V+
Sbjct: 17 CELTVVLQDFSAAHSSELSIQVGQTVELLERPSERPGWCLVR 58
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 45.0 bits (107), Expect = 3e-05
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 16/86 (18%)
Query: 433 LLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVMTRLQHQNLVQLYG 489
+ LG G FG V + + +K+ +E+ + E ++ L HQ +V+ Y
Sbjct: 10 EIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 490 V-------------CSKHRPIYIVTD 502
K ++I +
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQME 95
Score = 29.2 bits (66), Expect = 3.4
Identities = 7/43 (16%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
G+L + + + Q+ + ++Y+ IHR
Sbjct: 100 GTLYDLIHSENLNQ--QRDEYWRLFRQILEALSYIHSQGIIHR 140
>1mv3_A MYC box dependent interacting protein 1; tumor suppressor,
endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP:
b.34.2.1
Length = 213
Score = 44.3 bits (103), Expect = 3e-05
Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 14/66 (21%)
Query: 128 VVALYPFKAIEGGDLSLEKG-----AEYEVMDDTQEHWWK---------VKDKNGSVGYI 173
V A + + A + +L L+ G ++ ++ E W K G
Sbjct: 145 VQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKKLEKCRGVF 204
Query: 174 PSNYVK 179
P N+ +
Sbjct: 205 PENFTE 210
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 45.0 bits (107), Expect = 3e-05
Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 11/78 (14%)
Query: 433 LLEELGSGQFGVVRRGKWRGSIDVAM-------MKEGTMSEDDFIEEAKVMTRLQHQNL- 484
+L+++GSG V + A+ T+ D + E + +LQ +
Sbjct: 32 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL--DSYRNEIAYLNKLQQHSDK 89
Query: 485 -VQLYGVCSKHRPIYIVT 501
++LY + IY+V
Sbjct: 90 IIRLYDYEITDQYIYMVM 107
Score = 30.7 bits (70), Expect = 1.0
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 201 HQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT 239
+ ++ S KSDVW+ G +++ T GK P+ ++ N
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYY-MTYGKTPFQQIINQ 245
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 44.9 bits (107), Expect = 3e-05
Identities = 23/119 (19%), Positives = 48/119 (40%), Gaps = 16/119 (13%)
Query: 390 VNYHRHNSGGLASRLKTSPCDRPVPATAGLSH-DKWEIDPAELMLLEELGSGQFGVVRRG 448
+ +H H+ G P V A + D++ + +LG G +G V +
Sbjct: 1 MAHHHHHHMGTLEAQTQGPGSMSVSAAPSATSIDRYRR-------ITKLGEGTYGEVYKA 53
Query: 449 KWR--GSIDVAMMKEGTMSEDD-----FIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIV 500
VA+ + E++ I E ++ LQH+N+++L V + ++++
Sbjct: 54 IDTVTNET-VAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 44.6 bits (106), Expect = 4e-05
Identities = 18/78 (23%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 433 LLEELGSGQFGVVRRGKWRGSIDVAMMKE---GTMSEDD---FIEEAKVMTRLQHQNLVQ 486
+L +G+G +G ++ + + + + KE G+M+E + + E ++ L+H N+V+
Sbjct: 10 VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR 69
Query: 487 LYG--VCSKHRPIYIVTD 502
Y + + +YIV +
Sbjct: 70 YYDRIIDRTNTTLYIVME 87
Score = 30.3 bits (69), Expect = 1.4
Identities = 12/55 (21%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
+N ++ KSD+W+ G L++E+ P+ E+ +++ G P +
Sbjct: 187 QMNRMSYNEKSDIWSLGCLLYEL-CALMPPFTAFSQKELAGKIREGKFRRIPYRY 240
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 44.7 bits (106), Expect = 4e-05
Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Query: 433 LLEELGSGQFGVVRRGKWRGSIDVAM---MKEGTMSED--DFIEEAKVMTRLQHQNL--V 485
+L+++GSG V + A+ E ++ + E + +LQ + +
Sbjct: 13 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII 72
Query: 486 QLYGVCSKHRPIYIVT 501
+LY + IY+V
Sbjct: 73 RLYDYEITDQYIYMVM 88
Score = 30.4 bits (69), Expect = 1.3
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 201 HQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN 238
+ ++ S KSDVW+ G +++ T GK P+ ++ N
Sbjct: 189 ENGKSKSKISPKSDVWSLGCILYY-MTYGKTPFQQIIN 225
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 44.6 bits (106), Expect = 4e-05
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRG--KWRGSIDVAM----MKEGTMSEDDFIEEA 473
S W I+ + L E +GSG VV+ + VA+ +++ S D+ ++E
Sbjct: 6 SALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEK-VAIKRINLEKCQTSMDELLKEI 64
Query: 474 KVMTRLQHQNLVQLYG 489
+ M++ H N+V Y
Sbjct: 65 QAMSQCHHPNIVSYYT 80
Score = 33.8 bits (78), Expect = 0.11
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCI-----QVCKGMAYLERHNYIHRETK 49
+ GS+L+ ++ G+L + I +V +G+ YL ++ IHR+ K
Sbjct: 95 LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVK 148
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 44.8 bits (106), Expect = 4e-05
Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Query: 433 LLEELGSGQFGVVRRGKWRGSIDVAM---MKEGTMSED--DFIEEAKVMTRLQHQNL--V 485
+L+++GSG V + A+ E ++ + E + +LQ + +
Sbjct: 60 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII 119
Query: 486 QLYGVCSKHRPIYIVT 501
+LY + IY+V
Sbjct: 120 RLYDYEITDQYIYMVM 135
Score = 29.8 bits (67), Expect = 2.3
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 201 HQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN 238
+ ++ S KSDVW+ G +++ T GK P+ ++ N
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYY-MTYGKTPFQQIIN 272
>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3
domain, protein binding; 2.01A {Homo sapiens} PDB:
2kt1_A
Length = 90
Score = 41.1 bits (96), Expect = 5e-05
Identities = 19/83 (22%), Positives = 23/83 (27%), Gaps = 19/83 (22%)
Query: 119 PDQMIRPKVVVALYPFKAIEGGDLSLEKG---------------AEYEVMDDTQEHWWK- 162
ALYPF+ DL L G AE W
Sbjct: 5 SMAGPEGFQYRALYPFRRERPEDLELLPGDVLVVSRAALQALGVAEGGERCPQSVGWMPG 64
Query: 163 VKDKNGSVGYIPSNYVKEKELLG 185
+ ++ G P YV E LG
Sbjct: 65 LNERTRQRGDFPGTYV---EFLG 84
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 44.2 bits (105), Expect = 5e-05
Identities = 13/74 (17%), Positives = 30/74 (40%), Gaps = 8/74 (10%)
Query: 435 EELGSGQFGVVRRGKWRGSIDVAMMKEGTMS-EDDFIEEAKVMTRL-QHQNLVQLYGVC- 491
+ LG G G V + + + + +K + E ++ R Q ++V++ V
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALK--MLQDCPKARREVELHWRASQCPHIVRIVDVYE 81
Query: 492 ---SKHRPIYIVTD 502
+ + + IV +
Sbjct: 82 NLYAGRKCLLIVME 95
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 43.9 bits (104), Expect = 6e-05
Identities = 16/84 (19%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE--GTMSEDDF---IEEAKVMT 477
+++ + +L L E+GSG G V + ++R + V +K+ + ++++ + + V+
Sbjct: 19 RYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVL 78
Query: 478 RL-QHQNLVQLYGVCSKHRPIYIV 500
+ +VQ +G + ++I
Sbjct: 79 KSHDCPYIVQCFGTFITNTDVFIA 102
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein
kinase, transferase; HET: SEP TPO ANP; 2.20A
{Arabidopsis thaliana} PDB: 3tl8_A*
Length = 326
Score = 43.7 bits (104), Expect = 7e-05
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 437 LGSGQFGVVRRGKWRGSIDVA--MMKEGT--MSEDDFIEEAKVMTRLQHQNLVQLYGVCS 492
LG G FG V +G+ VA +KE E F E ++++ H+NL++L G C
Sbjct: 38 LGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta
barrel, beta sandwich, signaling protei; 2.25A {Homo
sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Length = 466
Score = 44.2 bits (104), Expect = 8e-05
Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Query: 113 KNGIRKPDQMIRPKVVV---ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGS 169
+++I VV AL+ ++ +L + G EVMD T WW +
Sbjct: 15 GGEQLAINELISDGSVVCAEALWDHVTMDDQELGFKAGDVIEVMDATNREWWWGR-VADG 73
Query: 170 VGYIPSNYVKEKELLGLQKYDD 191
G+ P+++V+ + DD
Sbjct: 74 EGWFPASFVRLRVNQDEPADDD 95
Score = 38.0 bits (88), Expect = 0.007
Identities = 17/71 (23%), Positives = 24/71 (33%), Gaps = 2/71 (2%)
Query: 48 TKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW 107
+ +P E I AL+ ++ +L + G EVMD T W
Sbjct: 6 SHHYSHPGGGGEQLAINELISDGSVVCAEALWDHVTMDDQELGFKAGDVIEVMDATNREW 65
Query: 108 WK--VKDKNGI 116
W V D G
Sbjct: 66 WWGRVADGEGW 76
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 43.1 bits (102), Expect = 1e-04
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
+E +GSG FG V + K R ++K + + E K + +L H N+V G
Sbjct: 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNG 71
Score = 32.6 bits (75), Expect = 0.23
Identities = 7/48 (14%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGII 250
++ + + D++A G+++ E+ + ++ ++ GII
Sbjct: 192 QISSQDYGKEVDLYALGLILAELLHVCDTAFET---SKFFTDLRDGII 236
Score = 28.8 bits (65), Expect = 3.8
Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
G+L ++ + + L L++ Q+ KG+ Y+ I+R
Sbjct: 104 KGTLEQWIEKRRGEKL-DKVLALELFEQITKGVDYIHSKKLINR 146
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 43.1 bits (102), Expect = 1e-04
Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%)
Query: 365 YHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKW 424
+H +S G +E S+ ++ G + L++ D P + +
Sbjct: 2 HHHHHHSSGVDLGTENLYFQSMHQLQPRRVSFRGEASETLQSPGYDPSRPES--FFQQSF 59
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR--GSIDVAM--MKEGTMSEDD---FIEEAKVMT 477
+ L LG G +G V + + + G + A+ D + E
Sbjct: 60 QR-------LSRLGHGSYGEVFKVRSKEDGRL-YAVKRSMSPFRGPKDRARKLAEVGSHE 111
Query: 478 RL-QHQNLVQLYGVCSKHRPIYIVTD 502
++ QH V+L + +Y+ T+
Sbjct: 112 KVGQHPCCVRLEQAWEEGGILYLQTE 137
Score = 30.0 bits (68), Expect = 1.6
Identities = 6/43 (13%), Positives = 12/43 (27%), Gaps = 2/43 (4%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
SL + +L + +A+L +H
Sbjct: 141 PSLQQHCEAWGASLPEAQ--VWGYLRDTLLALAHLHSQGLVHL 181
Score = 29.6 bits (67), Expect = 2.5
Identities = 7/26 (26%), Positives = 17/26 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYG 234
+ + +DV++ G+ + EV ++P+G
Sbjct: 232 YGTAADVFSLGLTILEVACNMELPHG 257
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 43.0 bits (102), Expect = 1e-04
Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 434 LEELGSGQFGVVRRGKWR--GSIDVAMMKEGTMSEDDF----IEEAKVMTRLQHQNLVQL 487
L++LG G + V +GK + ++ VA+ + E+ I E ++ L+H N+V L
Sbjct: 7 LDKLGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTL 65
Query: 488 YGVCSKHRPIYIV 500
+ + + + +V
Sbjct: 66 HDIIHTEKSLTLV 78
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 43.0 bits (102), Expect = 1e-04
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 434 LEELGSGQFGVVRRGKWR--GSIDVAMMKEGTMSEDDF----IEEAKVMTRLQHQNLVQL 487
LE+LG+G + V +G + G VA+ + SE+ I E +M L+H+N+V+L
Sbjct: 10 LEKLGNGTYATVYKGLNKTTGVY-VALKEVKLDSEEGTPSTAIREISLMKELKHENIVRL 68
Query: 488 YGVCSKHRPIYIV 500
Y V + +V
Sbjct: 69 YDVIHTENKLTLV 81
>1uur_A Stata protein, STAT protein; transcription activator, SH2, signal
transduction, transducer, transcription factor; HET:
PTR; 2.7A {Dictyostelium discoideum} SCOP: a.47.1.1
b.2.5.5 d.93.1.1 PDB: 1uus_A*
Length = 473
Score = 43.4 bits (101), Expect = 2e-04
Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRG 315
G M RQ L+ + G F++R S G + ++ +KHY ++ N
Sbjct: 353 IIYGYMGRQEVNDALQNQ-DPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQPNDTA 411
Query: 316 EFFLSEKHCCHSIPEVKD 333
+ + +
Sbjct: 412 AAKKTFPDFLSEHSQFVN 429
Score = 33.0 bits (74), Expect = 0.26
Identities = 14/79 (17%), Positives = 24/79 (30%), Gaps = 2/79 (2%)
Query: 334 KEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVN- 391
G F++R S G + ++ +KHY ++ N + + VN
Sbjct: 371 DPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQPNDTAAAKKTFPDFLSEHSQFVNL 430
Query: 392 YHRHNSGGLASRLKTSPCD 410
A R D
Sbjct: 431 LQWTKDTNGAPRFLKLHKD 449
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 42.7 bits (101), Expect = 2e-04
Identities = 22/108 (20%), Positives = 35/108 (32%), Gaps = 11/108 (10%)
Query: 393 HRHNSGGLASRLKTSPCDRPVPA------TAGLSHDKWEIDPAEL-MLLEELGSGQFGVV 445
H H+ L T A L + DP L ++G G G+V
Sbjct: 2 HHHHHHSSGVDLGTENLYFQSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIV 61
Query: 446 RRGKWRGSIDVAMMK----EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
+ + S +K + E +M QH N+V++Y
Sbjct: 62 CLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYK 109
Score = 28.9 bits (65), Expect = 4.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 27 MCIQVCKGMAYLERHNYIHRETK 49
+C V + +AYL IHR+ K
Sbjct: 146 VCEAVLQALAYLHAQGVIHRDIK 168
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 42.8 bits (101), Expect = 2e-04
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 427 DPAEL-MLLEELGSGQFGVVRRGKWRGSIDVAMMK----EGTMSEDDF---IEEAKVMTR 478
DP +L L E+G G FG V + + +V +K G S + + I+E + + +
Sbjct: 51 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK 110
Query: 479 LQHQNLVQLYGVCSKHRPIYIV 500
L+H N +Q G + ++V
Sbjct: 111 LRHPNTIQYRGCYLREHTAWLV 132
Score = 28.9 bits (65), Expect = 3.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 27 MCIQVCKGMAYLERHNYIHRETK 49
+ +G+AYL HN IHR+ K
Sbjct: 159 VTHGALQGLAYLHSHNMIHRDVK 181
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 42.6 bits (101), Expect = 2e-04
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 26/116 (22%)
Query: 393 HRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWR- 451
H H+S G+ + S +K+E L +G G +G+V + + +
Sbjct: 5 HHHHSSGVDLGTENLYFQ---------SMEKYEN-------LGLVGEGSYGMVMKCRNKD 48
Query: 452 -GSIDVAMMKEGTMSEDD------FIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIV 500
G I VA+ K+ S+DD + E K++ +L+H+NLV L VC K + Y+V
Sbjct: 49 TGRI-VAI-KKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102
Score = 30.3 bits (69), Expect = 1.4
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 6 LLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETK 49
+L+ L N L + ++ Q+ G+ + HN IHR+ K
Sbjct: 110 ILDDLELFPNGL--DYQVVQKYLFQIINGIGFCHSHNIIHRDIK 151
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 42.3 bits (100), Expect = 2e-04
Identities = 13/68 (19%), Positives = 25/68 (36%), Gaps = 5/68 (7%)
Query: 427 DPAEL-MLLEELGSGQFGVVRRGKWRGSIDVAMMK----EGTMSEDDFIEEAKVMTRLQH 481
DP + E++G G G V + ++ + ++ I E VM ++
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN 76
Query: 482 QNLVQLYG 489
N+V
Sbjct: 77 PNIVNYLD 84
Score = 29.2 bits (66), Expect = 3.4
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 27 MCIQVCKGMAYLERHNYIHRETK 49
+C + + + +L + IHR+ K
Sbjct: 121 VCRECLQALEFLHSNQVIHRDIK 143
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 42.3 bits (100), Expect = 2e-04
Identities = 20/123 (16%), Positives = 46/123 (37%), Gaps = 13/123 (10%)
Query: 391 NYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKW 450
++H H+SG + +PC+ +K ++ ++ + LGSG FG V G
Sbjct: 6 HHHHHSSGLVPRGSHMAPCNDLHATKLAPGKEKEPLE-SQYQVGPLLGSGGFGSVYSGIR 64
Query: 451 RGS-IDVA--------MMKEGTMSEDDFIE-EAKVMTRLQHQ--NLVQLYGVCSKHRPIY 498
+ VA + G + + E ++ ++ +++L +
Sbjct: 65 VSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFV 124
Query: 499 IVT 501
++
Sbjct: 125 LIL 127
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 42.6 bits (101), Expect = 2e-04
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 434 LEELGSGQFGVVRRGKWR--GSIDVAMMKEGTMSEDDFIE-----EAKVMTRLQHQNLVQ 486
+ ++G G +GVV + + R G I VA+ K +D I+ E +++ +L+H NLV
Sbjct: 8 IGKIGEGSYGVVFKCRNRDTGQI-VAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVN 66
Query: 487 LYGVCSKHRPIYIV 500
L V + R +++V
Sbjct: 67 LLEVFRRKRRLHLV 80
Score = 30.2 bits (69), Expect = 1.3
Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 6 LLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETK 49
+L+ L R++ + L+ + Q + + + +HN IHR+ K
Sbjct: 88 VLHELDRYQRGV--PEHLVKSITWQTLQAVNFCHKHNCIHRDVK 129
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 42.6 bits (101), Expect = 2e-04
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 11/79 (13%)
Query: 434 LEELGSGQFGVVRRGKWR--GSIDVAMMKEGTMSEDDFIE--------EAKVMTRLQHQN 483
L+ LG GQF V + + + I VA+ K + + E K++ L H N
Sbjct: 15 LDFLGEGQFATVYKARDKNTNQI-VAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPN 73
Query: 484 LVQLYGVCSKHRPIYIVTD 502
++ L I +V D
Sbjct: 74 IIGLLDAFGHKSNISLVFD 92
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 42.4 bits (100), Expect = 2e-04
Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 10/75 (13%)
Query: 435 EELGSGQFGVVRRGKWRGSIDVAMMKEGTMSED--DFIEEAKVMTRLQ-HQNLVQLYGVC 491
+ LG G G V + + + + +K M +D E ++ R ++V++ V
Sbjct: 68 QVLGLGINGKVLQIFNKRTQEKFALK---MLQDCPKARREVELHWRASQCPHIVRIVDVY 124
Query: 492 ----SKHRPIYIVTD 502
+ + + IV +
Sbjct: 125 ENLYAGRKCLLIVME 139
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 42.2 bits (100), Expect = 3e-04
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD-----FIEEAKVMTRLQHQNLVQLY 488
LE++G G +GVV + K VA+ + +ED+ I E ++ L H N+V L
Sbjct: 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLI 85
Query: 489 GVCSKHRPIYIV 500
V R + +V
Sbjct: 86 DVIHSERCLTLV 97
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 42.0 bits (99), Expect = 3e-04
Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Query: 435 EELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKH 494
+G G FG V R K + + +K+ + E +EE L +V LYG +
Sbjct: 64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRL-EVFRVEELVACAGLSSPRIVPLYGAVREG 122
Query: 495 RPIYIV 500
+ I
Sbjct: 123 PWVNIF 128
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 41.8 bits (99), Expect = 3e-04
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAMM---KEGTMSEDDFIE-EAKVMTRLQHQNLVQL 487
L++ LG G +G V+ R + VA+ + + + I+ E + L H+N+V+
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 70
Query: 488 YGVCSKHRPIYIVT 501
YG + Y+
Sbjct: 71 YGHRREGNIQYLFL 84
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 41.7 bits (99), Expect = 3e-04
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD-----FIEEAKVMTRLQHQNLVQLY 488
LE++G G +GVV + + A+ K ED+ I E ++ L+H N+V+LY
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 489 GVCSKHRPIYIV 500
V + + +V
Sbjct: 67 DVIHTKKRLVLV 78
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK,
transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB:
2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Length = 307
Score = 41.8 bits (99), Expect = 3e-04
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 437 LGSGQFGVVRRGKWRGSIDVA-------MMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
+G G FGVV +G + VA + + F +E KVM + QH+NLV+L G
Sbjct: 39 MGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 490 VCS 492
S
Sbjct: 98 FSS 100
Score = 29.8 bits (68), Expect = 2.3
Identities = 7/20 (35%), Positives = 15/20 (75%)
Query: 208 RFSSKSDVWAYGVLMWEVFT 227
+ KSD++++GV++ E+ T
Sbjct: 210 EITPKSDIYSFGVVLLEIIT 229
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 41.9 bits (99), Expect = 3e-04
Identities = 17/75 (22%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVA--MMKEGTMSEDDFIE---EAKVMTRLQHQNLVQ 486
LL+ +G G F V+ + + +VA ++ + ++ + E ++M L H N+V+
Sbjct: 19 LLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVK 78
Query: 487 LYGVCSKHRPIYIVT 501
L+ V + +Y++
Sbjct: 79 LFEVIETEKTLYLIM 93
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 41.8 bits (98), Expect = 3e-04
Identities = 19/81 (23%), Positives = 29/81 (35%), Gaps = 5/81 (6%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE--GTMSEDDF---IEEAKVMTRL 479
E+ + + ELG+G GVV + + S V K + I E +V+
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 88
Query: 480 QHQNLVQLYGVCSKHRPIYIV 500
+V YG I I
Sbjct: 89 NSPYIVGFYGAFYSDGEISIC 109
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 42.0 bits (99), Expect = 3e-04
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
++++GSG FGV R + + + VA+ ++ G +++ E L+H N+V+
Sbjct: 24 FVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKE 83
Query: 490 VCSKHRPIYIVT 501
V + I+
Sbjct: 84 VILTPTHLAIIM 95
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 41.6 bits (98), Expect = 4e-04
Identities = 21/101 (20%), Positives = 41/101 (40%), Gaps = 6/101 (5%)
Query: 406 TSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE--GT 463
T P D A + + +E+ +L + ELG G +GVV + + S + +K T
Sbjct: 28 TPPRDLDSKACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRAT 87
Query: 464 MSEDDF---IEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIV 500
++ + + + + R V YG + ++I
Sbjct: 88 VNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128
Score = 28.9 bits (65), Expect = 4.1
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 198 ELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN 238
E I+ LN +S KSD+W+ G+ M E+ + PY
Sbjct: 223 ERINPELNQKGYSVKSDIWSLGITMIELAI-LRFPYDSWGT 262
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 41.5 bits (98), Expect = 4e-04
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAMM---KEGTMSEDDFIE-EAKVMTRLQHQNLVQL 487
L++ LG G +G V+ R + VA+ + + + I+ E + L H+N+V+
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 70
Query: 488 YGVCSKHRPIYIVT 501
YG + Y+
Sbjct: 71 YGHRREGNIQYLFL 84
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 41.4 bits (98), Expect = 5e-04
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 434 LEELGSGQFGVVRRGKWR--GSIDVAMMKEGTMSEDD-----FIEEAKVMTRLQHQNLVQ 486
+E++G G +GVV + + + G + VA+ K +E + I E ++ L H N+V+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 487 LYGVCSKHRPIYIV 500
L V +Y+V
Sbjct: 67 LLDVIHTENKLYLV 80
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 41.1 bits (97), Expect = 5e-04
Identities = 13/108 (12%), Positives = 30/108 (27%), Gaps = 11/108 (10%)
Query: 401 ASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS------- 453
+ P + D LG G F +
Sbjct: 15 VAAPGAPAAAPPAKEIPEVLVDPRSRRRYVR--GRFLGKGGFAKCFEISDADTKEVFAGK 72
Query: 454 -IDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIV 500
+ +++ + + E + L HQ++V +G + +++V
Sbjct: 73 IVPKSLLLKPHQ-REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119
Score = 28.0 bits (63), Expect = 7.4
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMP 232
VL+ S + DVW+ G +M+ GK P
Sbjct: 212 VLSKKGHSFEVDVWSIGCIMY-TLLVGKPP 240
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 41.0 bits (97), Expect = 5e-04
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 434 LEELGSGQFGVVRRGKWR--GSIDVAMMKEGTMSEDD-----FIEEAKVMTRLQHQNLVQ 486
LE++G G +G V + K R I VA+ + +D+ + E ++ L+H+N+V+
Sbjct: 7 LEKIGEGTYGTVFKAKNRETHEI-VALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
Query: 487 LYGVCSKHRPIYIV 500
L+ V + + +V
Sbjct: 66 LHDVLHSDKKLTLV 79
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 41.1 bits (97), Expect = 6e-04
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 11/78 (14%)
Query: 433 LLEELGSGQFGVVRRGKWRGS--------IDVAMMKEGTMSEDDFIE-EAKVMTRLQHQN 483
+ E LG G FG V+ + I ++K+ M +E E + L+H +
Sbjct: 13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMR--VEREISYLKLLRHPH 70
Query: 484 LVQLYGVCSKHRPIYIVT 501
+++LY V + I +V
Sbjct: 71 IIKLYDVITTPTDIVMVI 88
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 40.8 bits (96), Expect = 6e-04
Identities = 15/97 (15%), Positives = 31/97 (31%), Gaps = 8/97 (8%)
Query: 414 PATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE----GTMSEDDF 469
ID + +++LG G F V + +K ++
Sbjct: 14 RENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEA 73
Query: 470 IEEAKVMTRLQHQNLVQLYGVCSKHRP----IYIVTD 502
EA + H N+++L C + R +++
Sbjct: 74 QREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLP 110
Score = 30.4 bits (69), Expect = 1.3
Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Query: 168 GSVGYIPSNYVKEKELLGLQKYDDVNGLTL-----ELIHQVLNYTRFSSKSDVWAYGVLM 222
GS+ + ++ L LQ + T+ EL V ++ ++DVW+ G ++
Sbjct: 179 GSMNQACIHVEGSRQALTLQDWAAQRC-TISYRAPELF-SVQSHCVIDERTDVWSLGCVL 236
Query: 223 WEVFTCGKMPY 233
+ G+ PY
Sbjct: 237 YA-MMFGEGPY 246
Score = 30.0 bits (68), Expect = 1.9
Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 9/48 (18%)
Query: 4 GSLLNYLRRHENTLGGNVGLL-----LDMCIQVCKGMAYLERHNYIHR 46
G+L N + R ++ L L + + +C+G+ + Y HR
Sbjct: 115 GTLWNEIERLKD----KGNFLTEDQILWLLLGICRGLEAIHAKGYAHR 158
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 40.7 bits (96), Expect = 6e-04
Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 11/78 (14%)
Query: 433 LLEELGSGQFGVVRRGKWRGS--------IDVAMMKEGTMSEDDFIE-EAKVMTRLQHQN 483
+++ LG G F V+ + I+ ++ + M IE E + L+H +
Sbjct: 17 IVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR--IEREISYLRLLRHPH 74
Query: 484 LVQLYGVCSKHRPIYIVT 501
+++LY V I +V
Sbjct: 75 IIKLYDVIKSKDEIIMVI 92
>2gtj_A FYN-binding protein; SH3, redox, signaling protein; NMR {Homo
sapiens} PDB: 2gto_A
Length = 96
Score = 38.1 bits (88), Expect = 6e-04
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Query: 102 DTQEHWWKVKDKNGIRKPDQMIRPKVVV----ALYPFKAIEGGDLSLEKGAEYEVMDDTQ 157
+ +E K K + I+K ++ P V+ A K +LS ++G + E++ T
Sbjct: 1 EKKEQKEKEKKEQEIKKKFKLTGPIQVIHLAKACCDVKG-GKNELSFKQGEQIEIIRITD 59
Query: 158 --EHWWKVKDKNGSVGYIPSNYV 178
E W + GS GYI + V
Sbjct: 60 NPEGKWLGRTARGSYGYIKTTAV 82
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 40.8 bits (96), Expect = 7e-04
Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 427 DPAEL-MLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSED---DFIEEAKVMTRL-QH 481
DPA + L+E +G+G +G V +G+ + +A +K ++ D + +E ++ + H
Sbjct: 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHH 80
Query: 482 QNLVQLYG 489
+N+ YG
Sbjct: 81 RNIATYYG 88
Score = 29.3 bits (66), Expect = 3.3
Identities = 8/23 (34%), Positives = 17/23 (73%)
Query: 27 MCIQVCKGMAYLERHNYIHRETK 49
+C ++ +G+++L +H IHR+ K
Sbjct: 134 ICREILRGLSHLHQHKVIHRDIK 156
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 40.7 bits (95), Expect = 7e-04
Identities = 10/87 (11%), Positives = 22/87 (25%), Gaps = 9/87 (10%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRGSID------VAM--MKEGTMSEDD-FIEEAKV 475
++ + + LG G F V D + K E + +
Sbjct: 61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMER 120
Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTD 502
+ ++ Y +V +
Sbjct: 121 LKPSMQHMFMKFYSAHLFQNGSVLVGE 147
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 40.7 bits (96), Expect = 8e-04
Identities = 19/95 (20%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 415 ATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS-IDVAM--MKEGTMSEDDFIE 471
A A + K+ ID ++ LG G+FG V + + + +A+ + + + ++
Sbjct: 2 ALAEMPKRKFTIDDFDI--GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEH 59
Query: 472 ----EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
E ++ + L+H N++++Y + IY++ +
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLE 94
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 40.8 bits (95), Expect = 8e-04
Identities = 15/84 (17%), Positives = 24/84 (28%), Gaps = 7/84 (8%)
Query: 428 PAELMLLEELGSGQFGVVRRGKWRGS-IDVAM------MKEGTMSEDDFIEEAKVMTRLQ 480
+L L+E L G VV + D A+ + + E RL
Sbjct: 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLL 120
Query: 481 HQNLVQLYGVCSKHRPIYIVTDTS 504
++ + P V S
Sbjct: 121 GESPEEARDRRRLLLPSDAVAVQS 144
Score = 33.1 bits (75), Expect = 0.21
Identities = 10/51 (19%), Positives = 21/51 (41%), Gaps = 3/51 (5%)
Query: 205 NYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
+ F+ + W G+ ++ V+ C +P+G T + + L P
Sbjct: 266 STATFTHALNAWQLGLSIYRVW-CLFLPFGL--VTPGIKGSWKRPSLRVPG 313
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 40.3 bits (95), Expect = 8e-04
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGS--------IDVAMMKEGTMSEDDFIEEAK 474
+W ++ E+ LG G+FG V + + S + A +++ + E E +
Sbjct: 5 QWALEDFEI--GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVE 61
Query: 475 VMTRLQHQNLVQLYGVCSKHRPIYIV 500
+ + L+H N+++LYG +Y++
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLI 87
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 40.9 bits (96), Expect = 9e-04
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAMM---KEGTMSEDDF--IE-EAKVMTRLQHQNLV 485
L + LG G FG V+ GK + VA+ ++ S D I E + + +H +++
Sbjct: 20 LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHII 79
Query: 486 QLYGVCSKHRPIYIVT 501
+LY V S I++V
Sbjct: 80 KLYQVISTPSDIFMVM 95
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 40.3 bits (95), Expect = 0.001
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM--MKEGTMSEDDFIE----EAKVMTRLQHQNLV 485
L + LG G FG V+ G+ + + VA+ + + D + E + + +H +++
Sbjct: 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHII 74
Query: 486 QLYGVCSKHRPIYIVT 501
+LY V S ++V
Sbjct: 75 KLYQVISTPTDFFMVM 90
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 40.0 bits (94), Expect = 0.001
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 437 LGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIE----EAKVMTRLQHQNLVQLYGVCS 492
LG G +G+V G+ + +KE + + + E + L+H+N+VQ G S
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 493 KHRPIYIV 500
++ I I
Sbjct: 90 ENGFIKIF 97
Score = 31.5 bits (72), Expect = 0.50
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETK 49
GSL LR L N + Q+ +G+ YL + +HR+ K
Sbjct: 104 GSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIK 149
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 40.0 bits (94), Expect = 0.001
Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 23/89 (25%)
Query: 434 LEELGSGQFGVVRRGKWRGS--------IDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLV 485
++ LG G FGVV K + I + + + + + E K + +L+H +V
Sbjct: 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNREL---AREKVMREVKALAKLEHPGIV 66
Query: 486 QLYGVC------------SKHRPIYIVTD 502
+ + S +YI
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQ 95
Score = 31.6 bits (72), Expect = 0.59
Identities = 6/43 (13%), Positives = 18/43 (41%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
+L +++ + L + +Q+ + + +L +HR
Sbjct: 100 ENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHR 142
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 40.4 bits (94), Expect = 0.001
Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 11/80 (13%)
Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM---MKEGTMSEDDFIE-EAKVMTRLQHQNLVQL 487
+ E LG+G FG V R + + VA+ +E + + E ++M +L H N+V
Sbjct: 18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 77
Query: 488 YGV------CSKHRPIYIVT 501
V + + +
Sbjct: 78 REVPDGLQKLAPNDLPLLAM 97
Score = 32.3 bits (73), Expect = 0.37
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETK 49
G L YL + EN G G + + + + YL + IHR+ K
Sbjct: 103 GDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLK 148
Score = 28.9 bits (64), Expect = 5.3
Identities = 10/55 (18%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
+L +++ D W++G L +E G P+ R E +
Sbjct: 194 LLEQKKYTVTVDYWSFGTLAFECI-TGFRPFLPNWQPVQWHGKVREKSNEHIVVY 247
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 39.5 bits (93), Expect = 0.002
Identities = 16/82 (19%), Positives = 33/82 (40%), Gaps = 6/82 (7%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSED-----DFIEEAKV-MTR 478
E+ +L + ELG G +GVV + + S + +K + + + + + M
Sbjct: 3 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRT 62
Query: 479 LQHQNLVQLYGVCSKHRPIYIV 500
+ V YG + ++I
Sbjct: 63 VDCPFTVTFYGALFREGDVWIC 84
Score = 28.0 bits (63), Expect = 6.6
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 198 ELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPY 233
E I+ LN +S KSD+W+ G+ M E+ + PY
Sbjct: 179 ERINPELNQKGYSVKSDIWSLGITMIELAI-LRFPY 213
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 39.7 bits (93), Expect = 0.002
Identities = 14/103 (13%), Positives = 38/103 (36%), Gaps = 23/103 (22%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM----------MKEGTMSEDDF 469
I+ + + L G+F + + A+ ++ T S +D
Sbjct: 24 KEKDKYINDYRI--IRTLNQGKFNKIILCEKDNKF-YALKKYEKSLLEKKRDFTKSNNDK 80
Query: 470 IE----------EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
I E +++T ++++ + G+ + + +YI+ +
Sbjct: 81 ISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYE 123
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 39.6 bits (93), Expect = 0.002
Identities = 12/74 (16%), Positives = 24/74 (32%), Gaps = 8/74 (10%)
Query: 435 EELGSGQFGVVRRGKWRGSIDVAMMKEGTMS-EDDFIEEAKVMTRLQ-HQNLVQLYGVC- 491
+ LG G G V R + +K + +E + ++V + V
Sbjct: 35 QVLGLGVNGKVLECFHRRTGQKCALK--LLYDSPKARQEVDHHWQASGGPHIVCILDVYE 92
Query: 492 ---SKHRPIYIVTD 502
R + I+ +
Sbjct: 93 NMHHGKRCLLIIME 106
>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange
factor, autoinhibition, domain-swapped, cell junction,
cell project endocytosis; 2.40A {Mus musculus} PDB:
3gf9_A
Length = 283
Score = 38.6 bits (90), Expect = 0.003
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
V+ +Y + A +L+ KG V++ WWK + +G VG PSNYVK
Sbjct: 5 VIGMYDYTAQNDDELAFSKGQIINVLNKEDPDWWK-GEVSGQVGLFPSNYVKLTT 58
Score = 32.4 bits (74), Expect = 0.26
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
V+ +Y + A +L+ KG V++ WWK
Sbjct: 5 VIGMYDYTAQNDDELAFSKGQIINVLNKEDPDWWK 39
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 38.6 bits (90), Expect = 0.003
Identities = 12/80 (15%), Positives = 25/80 (31%), Gaps = 17/80 (21%)
Query: 433 LLEELGSGQFGVVRRGKWRGSID------VA--MMKEGTMSEDDFIE----EAKVMTRLQ 480
LL G W+ +D VA + + DD ++ ++R+
Sbjct: 35 LLIFHGGVPPLQF----WQA-LDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRID 89
Query: 481 HQNLVQLYGVCSKHRPIYIV 500
+ ++ V +V
Sbjct: 90 KPGVARVLDVVHTRAGGLVV 109
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 38.7 bits (91), Expect = 0.003
Identities = 11/72 (15%), Positives = 26/72 (36%), Gaps = 9/72 (12%)
Query: 437 LGSGQFGVVRRGKWRGS--------IDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLY 488
LG G F + + +++ + + E + L HQ++V +
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQ-REKMSMEISIHRSLAHQHVVGFH 81
Query: 489 GVCSKHRPIYIV 500
G + +++V
Sbjct: 82 GFFEDNDFVFVV 93
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 38.5 bits (90), Expect = 0.003
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 432 MLLEELGSGQFGVVRRGKWRGSIDVAMMKE------GTMSEDDFIEEAKVMTRL-QHQNL 484
LE++GSG+FG V + R + +K G++ E + + E L QH ++
Sbjct: 14 HELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHV 73
Query: 485 VQLYGVCSKHRPIYIVT 501
V+ + ++ + I
Sbjct: 74 VRYFSAWAEDDHMLIQN 90
Score = 32.7 bits (75), Expect = 0.21
Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 4 GSLLNYLRRHENTLGG-NVGLLLDMCIQVCKGMAYLERHNYIHR 46
GSL + + + + L D+ +QV +G+ Y+ + +H
Sbjct: 96 GSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHM 139
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 38.4 bits (90), Expect = 0.004
Identities = 16/78 (20%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Query: 433 LLEELGSGQFGVVRRGKWRGS--------IDVAMMKEGTMSEDDFIEEAKVMTRLQHQNL 484
+ + LG G +G V+ + + ++ E + +E +++ RL+H+N+
Sbjct: 9 MGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNV 68
Query: 485 VQLYGVCSKHRP--IYIV 500
+QL V +Y+V
Sbjct: 69 IQLVDVLYNEEKQKMYMV 86
>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP,
hydrolase, signaling protein; 3.10A {Homo sapiens}
Length = 595
Score = 38.8 bits (90), Expect = 0.004
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
W+ D+S AE++LK G F+ R S +G ++LS+ + HI+ + G
Sbjct: 4 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSV-----RVGDQVTHIRIQNSG 58
Query: 316 EFF 318
+F+
Sbjct: 59 DFY 61
>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine
phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo
sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*
Length = 532
Score = 38.7 bits (90), Expect = 0.004
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
W+ D+S AE++LK G F+ R S +G ++LS+ + HI+ + G
Sbjct: 4 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSV-----RVGDQVTHIRIQNSG 58
Query: 316 EFF 318
+F+
Sbjct: 59 DFY 61
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 38.3 bits (90), Expect = 0.004
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 9/72 (12%)
Query: 437 LGSGQFGVVRRGKWRGS--------IDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLY 488
LG G F V R + + ID M + M E K+ +L+H ++++LY
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGM-VQRVQNEVKIHCQLKHPSILELY 77
Query: 489 GVCSKHRPIYIV 500
+Y+V
Sbjct: 78 NYFEDSNYVYLV 89
Score = 27.9 bits (63), Expect = 8.5
Identities = 7/23 (30%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Query: 210 SSKSDVWAYGVLMWEVFTCGKMP 232
+SDVW+ G + + G+ P
Sbjct: 190 GLESDVWSLGCMFYT-LLIGRPP 211
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 38.0 bits (89), Expect = 0.005
Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Query: 433 LLEELGSGQFGVVRRGK-WRGSIDVA--MMKEGTMSEDDFIE----EAKVMTRLQHQNLV 485
++++LG G V + +I VA + +++ ++ E ++L HQN+V
Sbjct: 15 IVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIV 74
Query: 486 QLYGVCSKHRPIYIV 500
+ V + Y+V
Sbjct: 75 SMIDVDEEDDCYYLV 89
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 37.7 bits (88), Expect = 0.006
Identities = 15/83 (18%), Positives = 28/83 (33%), Gaps = 14/83 (16%)
Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM--------MKEGTMSEDDFIE-EAKVMTRL--- 479
L LG G FG V G + VA+ + +S+ E ++ ++
Sbjct: 35 LGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAG 94
Query: 480 -QHQNLVQLYGVCSKHRPIYIVT 501
H +++L +V
Sbjct: 95 GGHPGVIRLLDWFETQEGFMLVL 117
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase,
N-glycan, COR SH3 domain; 2.61A {Homo sapiens}
Length = 526
Score = 37.9 bits (87), Expect = 0.008
Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKEK 181
+A+Y + ++ +E G V + + + K + K G G PS V+EK
Sbjct: 446 IAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVREK 499
>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2
protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2
d.93.1.1 d.93.1.1
Length = 525
Score = 37.5 bits (87), Expect = 0.009
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNS 313
W+ +++ AE++L +G F+ R S S G TLS+ + V H I+
Sbjct: 6 WFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRR---NGAVTHIKIQNTG 60
Score = 36.7 bits (85), Expect = 0.016
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSL 295
W+ G +S + AE +L ++ K G F+VR S + G + LS+
Sbjct: 112 WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSV 151
>2kq8_A Cell WALL hydrolase; GFT protein structure, NESG, PSI, SH3 domain,
structural genomics, protein structure initiative; NMR
{Bacillus thuringiensis serovarkonkukian}
Length = 70
Score = 34.2 bits (79), Expect = 0.010
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 143 SLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
+L +G + +V+ + W K+ NG GYI + Y+ + E
Sbjct: 27 ALPQGQKVQVISENSG-WSKIN-YNGQTGYIGTRYLSKLE 64
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 36.7 bits (85), Expect = 0.018
Identities = 15/77 (19%), Positives = 32/77 (41%), Gaps = 12/77 (15%)
Query: 433 LLEELGSGQFGVVRRGKWRGSID---VAMMKEGTMSEDDF----IEEAKVMTRLQHQNLV 485
++G G +G V + K + D A+ + + E ++ L+H N++
Sbjct: 25 EGCKVGRGTYGHVYKAKRKDGKDDKDYALKQ---IEGTGISMSACREIALLRELKHPNVI 81
Query: 486 QLYGVCSKH--RPIYIV 500
L V H R ++++
Sbjct: 82 SLQKVFLSHADRKVWLL 98
Score = 30.2 bits (68), Expect = 1.9
Identities = 10/50 (20%), Positives = 21/50 (42%), Gaps = 6/50 (12%)
Query: 6 LLNYLRRHENTLGGNVGLLLDMCI------QVCKGMAYLERHNYIHRETK 49
L + ++ H + + L + Q+ G+ YL + +HR+ K
Sbjct: 106 LWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLK 155
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 36.2 bits (84), Expect = 0.020
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 432 MLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIE-EAKVMTRLQHQNLVQLYGV 490
+ +G+G FGVV + K S +VA+ K + + F E ++M ++H N+V L
Sbjct: 43 TNCKVIGNGSFGVVFQAKLVESDEVAIKK--VLQDKRFKNRELQIMRIVKHPNVVDLKAF 100
Score = 29.2 bits (66), Expect = 3.8
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 30 QVCKGMAYLERHNYIHRETK 49
Q+ + +AY+ HR+ K
Sbjct: 149 QLLRSLAYIHSIGICHRDIK 168
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 36.1 bits (84), Expect = 0.022
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 16/84 (19%)
Query: 434 LEELGSGQFGVVRRGKWR--GSIDVAMMKEGTMSEDD-F----IEEAKVMTRLQHQNLVQ 486
L ++G G FG V + + R G VA+ K +E + F + E K++ L+H+N+V
Sbjct: 22 LAKIGQGTFGEVFKARHRKTGQK-VALKKVLMENEKEGFPITALREIKILQLLKHENVVN 80
Query: 487 LYGVC--------SKHRPIYIVTD 502
L +C IY+V D
Sbjct: 81 LIEICRTKASPYNRCKGSIYLVFD 104
Score = 28.4 bits (64), Expect = 6.6
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 30 QVCKGMAYLERHNYIHRETKKS 51
+ G+ Y+ R+ +HR+ K +
Sbjct: 132 MLLNGLYYIHRNKILHRDMKAA 153
>2krs_A Probable enterotoxin; all beta, SH3, ENTD, CPF_0587, CPE0606,
structural genomics, PSI-2, protein structure
initiative; NMR {Clostridium perfringens}
Length = 74
Score = 33.0 bits (76), Expect = 0.023
Identities = 9/40 (22%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 143 SLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
+L + E++ + W++++ NG VGY +Y+
Sbjct: 26 TLRNNDKVEIIKEVDG-WYEIRF-NGKVGYASKSYITIVN 63
>2kt8_A Probable surface protein; SH3 family, structural genomics, PSI-2,
protein structure initiative, northeast structural
genomics consortium; NMR {Clostridium perfringens} PDB:
2kyb_A
Length = 76
Score = 33.1 bits (76), Expect = 0.025
Identities = 9/40 (22%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 143 SLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
SL + ++ + ++K++ GS GY+ Y+K+ +
Sbjct: 28 SLSGNTKVTIVGEEGA-FYKIEY-KGSHGYVAKEYIKDIK 65
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 36.0 bits (83), Expect = 0.028
Identities = 13/85 (15%), Positives = 28/85 (32%), Gaps = 9/85 (10%)
Query: 427 DPAEL-MLLEELGSGQ--FGVVRRGKWRGSIDVAMMK-----EGTMSEDDFIE-EAKVMT 477
LL +G G V +++ + + ++ + F++ E V
Sbjct: 22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSK 81
Query: 478 RLQHQNLVQLYGVCSKHRPIYIVTD 502
H N+V +++VT
Sbjct: 82 LFNHPNIVPYRATFIADNELWVVTS 106
Score = 29.9 bits (67), Expect = 2.1
Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETK 49
M +GS + + H G N + + V K + Y+ Y+HR K
Sbjct: 108 MAYGSAKDLICTHFMD-GMNELAIAYILQGVLKALDYIHHMGYVHRSVK 155
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 34.3 bits (79), Expect = 0.072
Identities = 18/85 (21%), Positives = 29/85 (34%), Gaps = 5/85 (5%)
Query: 416 TAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS-IDVA---MMKEGTMSEDDFIE 471
+ E+ L + L G F V + GS + A ++ I+
Sbjct: 15 QSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQ 74
Query: 472 EAKVMTRLQ-HQNLVQLYGVCSKHR 495
E M +L H N+VQ S +
Sbjct: 75 EVCFMKKLSGHPNIVQFCSAASIGK 99
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 34.1 bits (79), Expect = 0.094
Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 17/80 (21%)
Query: 433 LLEELGSGQFGVVRRGKWRGSID------VA--MMKEGTMSEDDFIE----EAKVMTRLQ 480
L +G G G V + D VA +M E S+ F EA+ RLQ
Sbjct: 38 LRRLVGRGGMGDVYEAE-----DTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQ 92
Query: 481 HQNLVQLYGVCSKHRPIYIV 500
++V ++ +Y+
Sbjct: 93 EPHVVPIHDFGEIDGQLYVD 112
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 34.4 bits (79), Expect = 0.096
Identities = 20/118 (16%), Positives = 43/118 (36%), Gaps = 12/118 (10%)
Query: 396 NSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS-I 454
+ + + A+ H W+I + +G+G +G V +
Sbjct: 21 SGSQQEGQQRKQHHSSKPTASMPRPHSDWQIPD-RYEIRHLIGTGSYGHVCEAYDKLEKR 79
Query: 455 DVAMMKEGTMSEDDF-----IEEAKVMTRLQHQNLVQLYGVCSKHRP-----IYIVTD 502
VA+ K + ED + E ++ RL H ++V++ + +Y+V +
Sbjct: 80 VVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE 137
>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain,
peptide complex, alternative splicing, disease mutation,
HOST-virus interaction, phosphoprotein, polymorphism;
1.70A {Homo sapiens} PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A
1pks_A 1pkt_A
Length = 83
Score = 31.6 bits (71), Expect = 0.10
Identities = 13/66 (19%), Positives = 21/66 (31%), Gaps = 16/66 (24%)
Query: 130 ALYPFKAIEGGDLSLEKG---------------AEYEVMDDTQEHWWK-VKDKNGSVGYI 173
ALY +K D+ L G ++ + + W + G G
Sbjct: 10 ALYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDF 69
Query: 174 PSNYVK 179
P YV+
Sbjct: 70 PGTYVE 75
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 32.6 bits (75), Expect = 0.22
Identities = 19/100 (19%), Positives = 33/100 (33%), Gaps = 32/100 (32%)
Query: 433 LLEELGSGQFGVVR-----------------------------RGKWRGSIDVAMMKEGT 463
L +E+G G +GVV+ R RG+
Sbjct: 17 LKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQP 76
Query: 464 MSEDDFIE-EAKVMTRLQHQNLVQLYGV--CSKHRPIYIV 500
+ + E ++ +L H N+V+L V +Y+V
Sbjct: 77 RGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMV 116
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 32.9 bits (75), Expect = 0.23
Identities = 10/45 (22%), Positives = 22/45 (48%)
Query: 2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
R +L +++ R + G+ L + IQ+ + + +L +HR
Sbjct: 144 RKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHR 188
Score = 31.4 bits (71), Expect = 0.58
Identities = 13/61 (21%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Query: 434 LEELGSGQFGVVRRGKWRGS-----IDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLY 488
++ +G G FGVV K + I + ++ + + E K + +L+H +V+ +
Sbjct: 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYF 70
Query: 489 G 489
Sbjct: 71 N 71
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein
coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl
ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB:
3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Length = 543
Score = 32.8 bits (75), Expect = 0.25
Identities = 9/71 (12%), Positives = 25/71 (35%), Gaps = 4/71 (5%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDM 262
+L + D +A GV ++E + P+ +++ ++ + Y
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYE-MIAARGPFRARGEKVENKELKQRVLEQAVT--YPDKF 416
Query: 263 SRQRAESILKQ 273
S ++ +
Sbjct: 417 SPA-SKDFCEA 426
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 32.8 bits (75), Expect = 0.26
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDM 262
V+ R++ D WA G L++E G+ P+ + K + V+R + + Y
Sbjct: 356 VVKNERYTFSPDWWALGCLLYE-MIAGQSPFQQRKKKIKREEVERLVKEVPEE--YSERF 412
Query: 263 SRQRAESILKQ 273
S Q A S+ Q
Sbjct: 413 SPQ-ARSLCSQ 422
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 32.6 bits (75), Expect = 0.27
Identities = 21/82 (25%), Positives = 29/82 (35%), Gaps = 17/82 (20%)
Query: 433 LLEELGSGQFGVVRRGK----WRGSIDVA--MMKEGTMSEDDFIE----EAKVMTRLQHQ 482
L E LG G V + R DVA +++ + F EA+ L H
Sbjct: 16 LGEILGFGGMSEVHLARDLRDHR---DVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 483 NLVQLYGVCSKHRPI----YIV 500
+V +Y P YIV
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIV 94
Score = 27.6 bits (62), Expect = 9.9
Identities = 5/25 (20%), Positives = 14/25 (56%)
Query: 25 LDMCIQVCKGMAYLERHNYIHRETK 49
+++ C+ + + ++ IHR+ K
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVK 143
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 32.8 bits (75), Expect = 0.28
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 432 MLLEELGSGQFGVVRRGKWRGS-IDVAMMKEGTMSEDDFIE-EAKVMTRLQHQNLVQLYG 489
+ +G+G FGVV + K S VA+ K + + F E ++M +L H N+V+L
Sbjct: 57 TDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKNRELQIMRKLDHCNIVRLRY 114
Query: 490 V 490
Sbjct: 115 F 115
Score = 29.3 bits (66), Expect = 3.3
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 30 QVCKGMAYLERHNYIHRETK 49
Q+ + +AY+ HR+ K
Sbjct: 164 QLFRSLAYIHSFGICHRDIK 183
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 32.9 bits (75), Expect = 0.29
Identities = 13/85 (15%), Positives = 25/85 (29%), Gaps = 23/85 (27%)
Query: 433 LLEELGSGQFGVVRRGK-----WRGSIDVA--MMKEGTMSEDD-----FIEEAKVMTRLQ 480
+ + G G + R V + S D + E + + +
Sbjct: 84 VKGCIAHGGLGWIYLALDRNVNGR---PVVLKGLVH---SGDAEAQAMAMAERQFLAEVV 137
Query: 481 HQNLVQLY-----GVCSKHRPIYIV 500
H ++VQ++ YIV
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIV 162
>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A
{Antonospora locustae}
Length = 178
Score = 31.8 bits (72), Expect = 0.33
Identities = 16/105 (15%), Positives = 32/105 (30%), Gaps = 18/105 (17%)
Query: 332 KDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVN 391
+ F++R S G L + K H I+++S ++ I EV++
Sbjct: 30 RSSTDDFLIRKGSRHGYCVLVI--KFASDVFVHMKIEEHSEHYTCSNKHF--EDIDEVIS 85
Query: 392 YHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEE 436
+ + +H K+ P + L
Sbjct: 86 VYVRPILRNLKSI--------------KAHAKYFNSPEDAEKLLS 116
Score = 27.9 bits (62), Expect = 6.6
Identities = 11/66 (16%), Positives = 24/66 (36%), Gaps = 4/66 (6%)
Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE 316
+ + +E+ L+ F++R S G L + K H I+++S
Sbjct: 15 PLFKNFNVTESENYLRS--STDDFLIRKGSRHGYCVLVI--KFASDVFVHMKIEEHSEHY 70
Query: 317 FFLSEK 322
++
Sbjct: 71 TCSNKH 76
>1ri9_A FYN-binding protein; SH3-like, helically extended, signaling
protein; NMR {Homo sapiens} SCOP: b.34.2.1
Length = 102
Score = 29.6 bits (66), Expect = 0.66
Identities = 12/65 (18%), Positives = 27/65 (41%)
Query: 118 KPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNY 177
+++ V K DL ++ G EV+ T + +++ G GY+ +Y
Sbjct: 34 GEIRVLYSTKVTTSITSKKWGTRDLQVKPGESLEVIQTTDDTKVLCRNEEGKYGYVLRSY 93
Query: 178 VKEKE 182
+ + +
Sbjct: 94 LADND 98
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 31.0 bits (71), Expect = 0.83
Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 19/85 (22%)
Query: 434 LEELGSGQFGVVRRGKWR--GSIDVAMMKEGTMSEDDF--------IEEAKVMTRLQ--- 480
+ E+G G +G V + + G VA+ + + E ++ RL+
Sbjct: 14 VAEIGVGAYGTVYKARDPHSGHF-VALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFE 72
Query: 481 HQNLVQLYGVCSKHRP-----IYIV 500
H N+V+L VC+ R + +V
Sbjct: 73 HPNVVRLMDVCATSRTDREIKVTLV 97
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene
family, nuclear protein, phosphorylation, disease
mutation, polymorphism; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.211.1.1 PDB: 4a63_B
Length = 239
Score = 30.7 bits (70), Expect = 0.93
Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 14/72 (19%)
Query: 109 KVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVM--DDTQEHWWKVKDK 166
+ +K I AL+ ++ +L +++G ++ +D E W
Sbjct: 166 GIMNKGVIY------------ALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWARL 213
Query: 167 NGSVGYIPSNYV 178
N GY+P N +
Sbjct: 214 NDKEGYVPRNLL 225
>16vp_A Protein (VP16, VMW65, ATIF); transcriptional regulatory protein;
2.10A {Human herpesvirus 1} SCOP: d.180.1.1
Length = 366
Score = 30.5 bits (68), Expect = 1.3
Identities = 18/82 (21%), Positives = 30/82 (36%), Gaps = 9/82 (10%)
Query: 5 SLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKK-------SLYPSSL 57
+L YLR L + + + + Y +RET + LY
Sbjct: 132 ALYRYLRASVRQLHRQAHMR-GRDRDLGEMLRATIADRY-YRETARLARVLFLHLYLFLT 189
Query: 58 NEISFILWPDQMIRPKVVVALY 79
EI + + +QM+RP + L
Sbjct: 190 REILWAAYAEQMMRPDLFDCLC 211
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 30.3 bits (69), Expect = 1.6
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 17/83 (20%)
Query: 434 LEELGSGQFGVVRRG---KWRGSIDVAMMKEGTMSEDD-----FIEEAKVMTRLQ---HQ 482
+ E+G G +G V + K G VA+ + + ++ I E V+ L+ H
Sbjct: 16 VAEIGEGAYGKVFKARDLKNGGRF-VALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHP 74
Query: 483 NLVQLYGVCSKHRP-----IYIV 500
N+V+L+ VC+ R + +V
Sbjct: 75 NVVRLFDVCTVSRTDRETKLTLV 97
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 30.4 bits (69), Expect = 1.6
Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 19/89 (21%)
Query: 433 LLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIE--------------EAKVMTR 478
+ + SG +G V G I VA+ + D E +++
Sbjct: 26 VQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNH 85
Query: 479 LQHQNLVQLYGV-----CSKHRPIYIVTD 502
H N++ L + +Y+VT+
Sbjct: 86 FHHPNILGLRDIFVHFEEPAMHKLYLVTE 114
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol,
transferase; 2.00A {Oryza sativa japonica group}
Length = 483
Score = 30.0 bits (67), Expect = 1.8
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Query: 433 LLEELGSGQFGVVRRGK-WRGSIDVAMMKEGTMSEDDFIE-EAKVMTRLQHQNLV-QLY- 488
L ++GSG FG + G + + +VA+ E ++ + E+K+ LQ + +
Sbjct: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRW 70
Query: 489 -GVCSKHRPIYIVTD 502
GV + +V D
Sbjct: 71 FGVEGDYN--VLVMD 83
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 30.2 bits (68), Expect = 2.1
Identities = 12/76 (15%), Positives = 31/76 (40%), Gaps = 8/76 (10%)
Query: 198 ELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
E++ + + Y +D ++ G ++++ G P+ R T+ + R + +
Sbjct: 360 EVLQKGVAYDS---SADWFSLGCMLFK-LLRGHSPF-RQHKTKDKHEIDRMTLTMAVE-- 412
Query: 258 YVGDMSRQRAESILKQ 273
S + S+L+
Sbjct: 413 LPDSFSPE-LRSLLEG 427
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 29.7 bits (67), Expect = 2.2
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Query: 432 MLLEELGSGQFGVVRRGKWRGS-IDVAMMKEGTMSEDDFIE-EAKVMTRLQHQNLVQLY 488
L + LG+G FG+V S A+ K + + + E +M L H N+++L
Sbjct: 10 SLGKTLGTGSFGIVCEVFDIESGKRFALKK--VLQDPRYKNRELDIMKVLDHVNIIKLV 66
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A
{Saccharopolyspora erythraea}
Length = 441
Score = 29.8 bits (67), Expect = 2.4
Identities = 17/110 (15%), Positives = 32/110 (29%)
Query: 403 RLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG 462
R+ SP AGL+ D + + G VR + + E
Sbjct: 52 RVVASPALTEDITAAGLTAVPVGTDVDLVDFMTHAGHDIIDYVRSLDFSERDPATLTWEH 111
Query: 463 TMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFRLGLLA 512
+ + + + C K RP ++ + +F + A
Sbjct: 112 LLGMQTVLTPTFYALMSPDTLIEGMVSFCRKWRPDLVIWEPLTFAAPIAA 161
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase,
ATP-BI nucleotide-binding, cardiac contractility, muscle
different; HET: BI8; 2.80A {Homo sapiens}
Length = 412
Score = 29.7 bits (67), Expect = 2.5
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
Query: 433 LLEELGSGQFGVVRRGKWRGSIDV-AM--MKEGTMSEDD----FIEEAKVMTRLQHQNLV 485
+L+ +G G F V K + + V AM M + M + F EE V+ + +
Sbjct: 65 ILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWIT 124
Query: 486 QLY 488
QL+
Sbjct: 125 QLH 127
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG
MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3
b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A*
2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Length = 559
Score = 29.6 bits (67), Expect = 2.6
Identities = 9/43 (20%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Query: 103 TQEHWWKVKDKNGIRKPDQMIRPKVVVA--LYPFKAIEG--GD 141
TQ + + + + + PD +++ KV++ I GD
Sbjct: 33 TQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGD 75
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 29.6 bits (66), Expect = 2.7
Identities = 7/42 (16%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 207 TRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
T + D W G+ ++ ++ C +P + + R
Sbjct: 292 TLMTFAFDTWTLGLAIYWIW-CADLPNTDDAALGGSEWIFRS 332
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 29.7 bits (67), Expect = 2.7
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 433 LLEELGSGQFGVVRRGKWRGSIDV-AM--MKEGTMSEDD----FIEEAKVMTRLQHQNLV 485
+++ +G G FG V+ + + + V AM + + M + F EE +M +V
Sbjct: 73 VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 132
Query: 486 QLYGVCSKHRPIYIVTD 502
QL+ R +Y+V +
Sbjct: 133 QLFYAFQDDRYLYMVME 149
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU;
CAMP-dependent protein kinase,catalytic mechanism, ATP
hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A
{Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E*
1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A*
1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A*
3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Length = 350
Score = 29.6 bits (67), Expect = 2.8
Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 11/79 (13%)
Query: 433 LLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIE---------EAKVMTRLQHQN 483
++ LG+G FG V K + S + MK + + ++ E +++ +
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 484 LVQLYGVCSKHRPIYIVTD 502
LV+L + +Y+V +
Sbjct: 103 LVKLEFSFKDNSNLYMVME 121
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 29.6 bits (66), Expect = 2.9
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDM 262
++ Y + D WA+GVL++E+ G+ P+ E D + + I+ Y M
Sbjct: 513 IIAYQPYGKSVDWWAFGVLLYEML-AGQAPF----EGEDEDELFQSIMEHNVA--YPKSM 565
Query: 263 SRQRAESILK 272
S++ A +I K
Sbjct: 566 SKE-AVAICK 574
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 29.2 bits (66), Expect = 3.5
Identities = 22/105 (20%), Positives = 42/105 (40%), Gaps = 13/105 (12%)
Query: 410 DRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDF 469
+RP L+ WE+ P L +GSG +G V + +K+ +
Sbjct: 11 ERPTFYRQELNKTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 69
Query: 470 IE------EAKVMTRLQHQNLVQLYGV------CSKHRPIYIVTD 502
I E +++ ++H+N++ L V + +Y+VT
Sbjct: 70 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 114
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase,
phosphorylation, serine/threonine protein kinase; 1.8A
{Homo sapiens} SCOP: d.144.1.7
Length = 355
Score = 29.2 bits (66), Expect = 3.6
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 214 DVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDMSRQRAESILKQ 273
D W+ GVLM+E G P+ + R I+ +P Y +MS A+ ++++
Sbjct: 244 DWWSLGVLMYE-LLTGASPFTVDGEKNSQAEISRRILKSEPP--YPQEMSAL-AKDLIQR 299
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase,
transferase-transferase inhibito; HET: TPO 07U; 2.05A
{Homo sapiens}
Length = 353
Score = 29.1 bits (66), Expect = 3.9
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 8/71 (11%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDM 262
+L + D WA GVL++E+ CG P+ E D + I+ ++ Y +
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEML-CGHAPF----EAENEDDLFEAILNDEVV--YPTWL 247
Query: 263 SRQRAESILKQ 273
A ILK
Sbjct: 248 HED-ATGILKS 257
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 28.8 bits (64), Expect = 4.3
Identities = 8/42 (19%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 207 TRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
T + D WA G++++ C +P + + + R
Sbjct: 288 TLMTFSFDAWALGLVIYW-IWCADLPITKDAALGGSEWIFRS 328
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor,
PF670462, transferase-transferase I complex; HET: 0CK;
1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Length = 296
Score = 28.9 bits (65), Expect = 4.3
Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 7/75 (9%)
Query: 433 LLEELGSGQFGVVRRGK-WRGSIDVAMMKEGTMSEDDFIE-EAKVMTRLQH-QNLVQLY- 488
L ++GSG FG + G +VA+ E ++ + E+K+ +Q + +
Sbjct: 13 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRW 72
Query: 489 -GVCSKHRPIYIVTD 502
G + +V +
Sbjct: 73 CGAEGDYN--VMVME 85
>1t62_A Conserved hypothetical protein; NYSGXRC, target T1587, unknown
function, PSI, protein struct initiative; 3.00A
{Enterococcus faecalis} SCOP: b.122.1.4
Length = 166
Score = 28.0 bits (62), Expect = 5.4
Identities = 11/73 (15%), Positives = 23/73 (31%), Gaps = 9/73 (12%)
Query: 246 QRGIILEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS--STKGLYTLSLYTKVPHPH 303
+ + + P W GD S + + + VV +T + + P
Sbjct: 15 KHELDMLMPDVWMFGDGSSEMGNRLGQ-------LVVSGRKTATCSSLDIYKMEEEQLPK 67
Query: 304 VKHYHIKQNSRGE 316
Y I + + +
Sbjct: 68 AGQYDIILDGQSQ 80
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase,
transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB:
3iw4_A*
Length = 353
Score = 28.3 bits (64), Expect = 5.4
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDM 262
++ Y + D WA+GVL++E+ G+ P+ E D + + I+ Y M
Sbjct: 192 IIAYQPYGKSVDWWAFGVLLYEML-AGQAPF----EGEDEDELFQSIMEHNVA--YPKSM 244
Query: 263 SRQRAESILK 272
S++ A +I K
Sbjct: 245 SKE-AVAICK 253
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase,
transferase, serine/threonine-protein kinase; HET: TPO
ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A*
2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A*
3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A
1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Length = 337
Score = 28.3 bits (64), Expect = 5.5
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDM 262
VL + D W GV+M+E CG++P+ + +R+ I++E+ + + +
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYE-MMCGRLPF----YNQDHERLFELILMEEIR--FPRTL 228
Query: 263 SRQRAESILKQ 273
S + A+S+L
Sbjct: 229 SPE-AKSLLAG 238
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity,
atypical PKC, trans transferase substrate complex; HET:
TPO ADE; 2.40A {Mus musculus}
Length = 396
Score = 28.5 bits (64), Expect = 6.3
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV-----VDRVQRGIILEKPKAW 257
+L + D WA GVLM+E+ G+ P+ + +++ D + + I+ ++ +
Sbjct: 224 ILRGEDYGFSVDWWALGVLMFEMM-AGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR-- 280
Query: 258 YVGDMSRQRAESILK 272
+S + A S+LK
Sbjct: 281 IPRSLSVK-AASVLK 294
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 28.2 bits (63), Expect = 7.1
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
Query: 433 LLEELGSGQFGVVRRGKWRGSIDV-AM--MKEGTMSEDD----FIEEAKVMTRLQHQNLV 485
+L+ +G G FG V K + + V AM + + M + F EE V+ + +
Sbjct: 78 ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWIT 137
Query: 486 QLY 488
L+
Sbjct: 138 TLH 140
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 28.2 bits (63), Expect = 7.4
Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDM 262
VL + D W GV+M+E+ CG++P+ + +++ I++E+ + + +
Sbjct: 320 VLEDNDYGRAVDWWGLGVVMYEMM-CGRLPF----YNQDHEKLFELILMEEIR--FPRTL 372
Query: 263 SRQRAESILKQ 273
+ A+S+L
Sbjct: 373 GPE-AKSLLSG 382
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 28.0 bits (63), Expect = 7.5
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 432 MLLEELGSGQFGVVRRGKWRGS-IDVAMMKEGTMSEDDF----IEEAKVMTRLQHQNLVQ 486
+ G G FG V+ GK + + + VA+ K + + F ++ + + L H N+VQ
Sbjct: 26 QVERMAGQGTFGTVQLGKEKSTGMSVAIKK--VIQDPRFRNRELQIMQDLAVLHHPNIVQ 83
Query: 487 LY 488
L
Sbjct: 84 LQ 85
>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC,
cell junction, cell membrane, membrane, SH3 domain;
2.80A {Homo sapiens}
Length = 308
Score = 27.9 bits (61), Expect = 9.3
Identities = 10/100 (10%), Positives = 22/100 (22%), Gaps = 14/100 (14%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG--------------SVGYI 173
+ + + L +G + V+D + + G G I
Sbjct: 7 IRTHFELEPSPPSGLGFTRGDVFHVLDTLHPGPGQSHARGGHWLAVRMGRDLREQERGII 66
Query: 174 PSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKS 213
P+ E+ V + +
Sbjct: 67 PNQSRAEQLASLEAAQRAVGVGPGSSAGSNARAEFWRLRG 106
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 27.6 bits (62), Expect = 9.8
Identities = 17/79 (21%), Positives = 27/79 (34%), Gaps = 11/79 (13%)
Query: 433 LLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIE---------EAKVMTRLQHQN 483
+ LG G F V + + +K + + I+ E VM+RL H
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 484 LVQLYGVCSKHRPIYIVTD 502
V+LY +Y
Sbjct: 92 FVKLYFTFQDDEKLYFGLS 110
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 27.7 bits (62), Expect = 9.9
Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 13/91 (14%)
Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGS-IDVAMMKEGTMSEDDF-----IEEAKVMT 477
WE+ A L+ +GSG +G V + VA+ K + + E +++
Sbjct: 21 WEV-RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLK 79
Query: 478 RLQHQNLVQLYGV------CSKHRPIYIVTD 502
++H+N++ L V Y+V
Sbjct: 80 HMRHENVIGLLDVFTPDETLDDFTDFYLVMP 110
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 27.6 bits (61), Expect = 10.0
Identities = 4/19 (21%), Positives = 13/19 (68%)
Query: 209 FSSKSDVWAYGVLMWEVFT 227
+++ +D+W+ + +E+ T
Sbjct: 270 YNTPADIWSTACMAFELAT 288
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.319 0.136 0.422
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 8,060,015
Number of extensions: 491111
Number of successful extensions: 2772
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1996
Number of HSP's successfully gapped: 1016
Length of query: 513
Length of database: 6,701,793
Length adjustment: 98
Effective length of query: 415
Effective length of database: 3,965,535
Effective search space: 1645697025
Effective search space used: 1645697025
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (26.6 bits)