Query psy17477
Match_columns 108
No_of_seqs 104 out of 283
Neff 5.1
Searched_HMMs 46136
Date Fri Aug 16 23:30:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17477.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/17477hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01238 PH_Tec Tec pleckstrin 99.7 1.6E-16 3.5E-21 109.3 5.2 53 43-97 1-54 (106)
2 cd01251 PH_centaurin_alpha Cen 99.4 1.1E-12 2.3E-17 89.8 4.9 45 44-95 1-45 (103)
3 cd01233 Unc104 Unc-104 pleckst 99.3 1.9E-12 4.1E-17 87.8 5.6 48 41-96 1-48 (100)
4 cd01244 PH_RasGAP_CG9209 RAS_G 99.3 4.9E-12 1.1E-16 86.9 4.9 46 45-95 4-49 (98)
5 cd01235 PH_SETbf Set binding f 99.2 1.8E-11 4E-16 81.2 5.1 45 45-97 2-48 (101)
6 cd01247 PH_GPBP Goodpasture an 99.2 2.3E-11 5E-16 81.9 5.1 46 45-97 2-48 (91)
7 cd01252 PH_cytohesin Cytohesin 99.1 1.2E-10 2.7E-15 81.3 5.4 45 44-96 2-46 (125)
8 cd01266 PH_Gab Gab (Grb2-assoc 99.0 2.8E-10 6E-15 78.0 4.9 49 45-97 2-57 (108)
9 cd01264 PH_melted Melted pleck 99.0 2.4E-10 5.2E-15 79.3 4.6 48 44-95 2-49 (101)
10 cd01265 PH_PARIS-1 PARIS-1 ple 99.0 4.1E-10 9E-15 75.9 4.6 46 45-97 2-50 (95)
11 cd01241 PH_Akt Akt pleckstrin 99.0 6E-10 1.3E-14 76.0 5.0 36 42-84 1-37 (102)
12 KOG2059|consensus 99.0 3.2E-10 6.9E-15 99.8 4.4 86 11-103 537-630 (800)
13 cd01257 PH_IRS Insulin recepto 99.0 7E-10 1.5E-14 76.6 4.9 44 41-95 1-54 (101)
14 cd01236 PH_outspread Outspread 99.0 7.2E-10 1.6E-14 77.0 4.8 49 44-95 1-55 (104)
15 cd01260 PH_CNK Connector enhan 98.9 1.8E-09 4E-14 71.6 5.6 50 44-97 2-51 (96)
16 cd05134 RasGAP_RASA3 RASA3 (or 98.9 2.1E-10 4.6E-15 92.7 0.7 69 1-74 241-310 (310)
17 cd05394 RasGAP_RASA2 RASA2 (or 98.9 1.1E-10 2.3E-15 94.7 -1.2 67 3-74 246-313 (313)
18 cd01254 PH_PLD Phospholipase D 98.9 2.9E-09 6.2E-14 74.9 4.9 55 44-101 1-66 (121)
19 cd01245 PH_RasGAP_CG5898 RAS G 98.8 4.2E-09 9.1E-14 72.6 3.3 44 44-94 1-48 (98)
20 PF00169 PH: PH domain; Inter 98.8 1.9E-08 4.2E-13 64.0 5.9 47 42-95 1-49 (104)
21 KOG0930|consensus 98.7 2E-08 4.4E-13 81.8 5.6 45 44-95 262-306 (395)
22 cd01246 PH_oxysterol_bp Oxyste 98.7 3.7E-08 8E-13 63.3 5.2 46 44-96 1-47 (91)
23 cd01250 PH_centaurin Centaurin 98.7 4.6E-08 1E-12 63.1 5.1 36 44-85 1-36 (94)
24 cd05128 RasGAP_GAP1_like The G 98.6 9.4E-09 2E-13 83.1 1.2 61 11-73 253-315 (315)
25 cd01256 PH_dynamin Dynamin ple 98.5 2.5E-07 5.5E-12 65.0 4.4 48 42-95 1-48 (110)
26 PF15413 PH_11: Pleckstrin hom 98.4 2.5E-07 5.4E-12 64.2 4.1 34 44-83 1-35 (112)
27 PF15409 PH_8: Pleckstrin homo 98.4 2.9E-07 6.3E-12 62.8 4.3 44 46-96 1-46 (89)
28 cd01263 PH_anillin Anillin Ple 98.3 1.5E-06 3.3E-11 62.0 5.0 47 44-97 3-53 (122)
29 cd05135 RasGAP_RASAL Ras GTPas 98.2 2.9E-07 6.2E-12 75.1 -0.4 68 3-73 262-333 (333)
30 KOG1090|consensus 98.1 9E-07 2E-11 81.3 1.6 57 39-103 1631-1689(1732)
31 cd01237 Unc112 Unc-112 pleckst 98.0 6.5E-06 1.4E-10 57.9 3.1 28 57-86 14-41 (106)
32 cd05395 RasGAP_RASA4 Ras GTPas 97.9 2.7E-06 5.9E-11 69.6 0.1 62 11-74 268-332 (337)
33 cd01219 PH_FGD FGD (faciogenit 97.9 3E-05 6.4E-10 52.7 5.2 36 41-83 1-36 (101)
34 smart00233 PH Pleckstrin homol 97.9 4.9E-05 1.1E-09 46.9 5.8 37 43-85 2-38 (102)
35 cd01253 PH_beta_spectrin Beta- 97.8 2E-05 4.4E-10 52.8 3.7 37 45-84 2-42 (104)
36 cd01234 PH_CADPS CADPS (Ca2+-d 97.6 3.3E-05 7E-10 54.9 2.2 29 43-77 3-31 (117)
37 PF14593 PH_3: PH domain; PDB: 97.2 0.00099 2.1E-08 46.5 5.3 49 39-98 10-59 (104)
38 cd00900 PH-like Pleckstrin hom 97.1 0.0016 3.5E-08 40.0 4.9 39 45-86 2-40 (99)
39 cd00821 PH Pleckstrin homology 97.0 0.00075 1.6E-08 41.2 3.3 47 44-96 1-49 (96)
40 cd01259 PH_Apbb1ip Apbb1ip (Am 96.7 0.002 4.4E-08 45.9 3.7 32 45-83 3-34 (114)
41 cd01230 PH_EFA6 EFA6 Pleckstri 96.0 0.011 2.3E-07 41.9 4.1 39 44-84 2-45 (117)
42 KOG0690|consensus 95.9 0.0022 4.7E-08 54.2 -0.0 38 39-83 12-50 (516)
43 cd01243 PH_MRCK MRCK (myotonic 95.5 0.045 9.8E-07 39.5 5.7 54 44-103 4-62 (122)
44 cd01239 PH_PKD Protein kinase 95.1 0.034 7.3E-07 39.9 3.9 38 43-87 1-38 (117)
45 cd01220 PH_CDEP Chondrocyte-de 94.5 0.12 2.7E-06 35.2 5.4 33 41-82 1-33 (99)
46 PF15410 PH_9: Pleckstrin homo 93.8 0.11 2.3E-06 36.1 4.0 39 43-83 1-44 (119)
47 PLN00188 enhanced disease resi 93.6 0.12 2.6E-06 46.5 4.9 59 41-103 3-70 (719)
48 KOG3751|consensus 93.5 0.073 1.6E-06 46.8 3.3 32 44-82 319-350 (622)
49 KOG0248|consensus 92.4 0.037 8.1E-07 50.0 -0.1 38 40-84 247-284 (936)
50 KOG1739|consensus 92.2 0.083 1.8E-06 46.2 1.8 50 39-95 21-71 (611)
51 KOG1737|consensus 92.0 0.13 2.9E-06 46.7 3.0 47 44-97 79-126 (799)
52 cd01242 PH_ROK Rok (Rho- assoc 91.4 0.6 1.3E-05 33.3 5.2 54 44-102 2-57 (112)
53 cd01240 PH_beta-ARK Beta adren 91.1 0.049 1.1E-06 39.0 -0.6 39 41-85 2-40 (116)
54 PLN02866 phospholipase D 90.9 0.36 7.8E-06 45.3 4.6 45 42-86 182-239 (1068)
55 KOG3640|consensus 89.5 0.24 5.2E-06 46.1 2.3 50 39-95 987-1040(1116)
56 cd01262 PH_PDK1 3-Phosphoinosi 86.5 1.7 3.6E-05 29.8 4.4 46 42-97 1-46 (89)
57 cd01258 PH_syntrophin Syntroph 80.8 2.2 4.8E-05 30.0 3.3 37 45-84 2-38 (108)
58 cd01218 PH_phafin2 Phafin2 Pl 80.4 4.5 9.9E-05 27.9 4.7 32 41-81 3-34 (104)
59 KOG3723|consensus 80.0 0.75 1.6E-05 41.4 0.8 38 43-84 736-773 (851)
60 cd01261 PH_SOS Son of Sevenles 78.7 6.3 0.00014 27.6 5.0 37 41-84 3-39 (112)
61 KOG0248|consensus 75.0 1 2.2E-05 41.2 0.2 52 44-104 261-314 (936)
62 PTZ00267 NIMA-related protein 74.8 6.2 0.00013 32.7 4.8 35 38-80 373-407 (478)
63 KOG1117|consensus 74.0 2.1 4.6E-05 40.1 2.0 56 41-104 86-150 (1186)
64 KOG1738|consensus 70.8 1.2 2.5E-05 39.9 -0.4 41 43-87 563-603 (638)
65 cd01224 PH_Collybistin Collybi 62.4 27 0.00058 24.6 5.2 35 42-83 2-36 (109)
66 PF15404 PH_4: Pleckstrin homo 58.6 14 0.00031 28.2 3.5 31 45-82 2-32 (185)
67 PF12814 Mcp5_PH: Meiotic cell 54.9 24 0.00053 24.5 4.0 35 46-82 13-49 (123)
68 KOG3543|consensus 53.9 3.2 7E-05 38.1 -0.8 33 39-77 461-493 (1218)
69 PTZ00486 apyrase Superfamily; 53.0 9.1 0.0002 32.1 1.8 52 45-105 230-283 (352)
70 KOG4424|consensus 50.3 13 0.00027 33.4 2.3 39 39-84 269-307 (623)
71 cd01249 PH_oligophrenin Oligop 43.9 25 0.00055 24.6 2.6 26 44-74 1-26 (104)
72 PF06079 Apyrase: Apyrase; In 40.1 6.6 0.00014 32.1 -0.9 53 45-106 167-221 (291)
73 KOG0521|consensus 34.6 12 0.00025 34.3 -0.3 41 39-85 271-311 (785)
74 KOG1117|consensus 31.7 64 0.0014 30.8 3.8 41 42-84 1030-1070(1186)
75 PTZ00283 serine/threonine prot 31.6 52 0.0011 27.6 3.1 28 39-74 370-397 (496)
76 PF10574 UPF0552: Uncharacteri 28.4 69 0.0015 25.4 3.1 32 39-73 32-63 (224)
77 PF15408 PH_7: Pleckstrin homo 27.1 16 0.00035 25.4 -0.5 33 45-86 1-33 (104)
78 PF04714 BCL_N: BCL7, N-termin 26.5 43 0.00092 20.9 1.3 18 64-81 29-46 (52)
79 KOG0705|consensus 26.1 11 0.00024 34.1 -1.9 38 42-84 302-340 (749)
80 PF04195 Transposase_28: Putat 26.0 30 0.00066 26.2 0.7 14 61-74 155-168 (181)
81 KOG1264|consensus 23.3 1E+02 0.0022 29.5 3.6 36 42-84 475-510 (1267)
No 1
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=99.65 E-value=1.6e-16 Score=109.27 Aligned_cols=53 Identities=40% Similarity=0.473 Sum_probs=46.8
Q ss_pred eeeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCCcc-cccceEEecCC
Q psy17477 43 LRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSEI-FLSGIRLSDLP 97 (108)
Q Consensus 43 lkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ek-~~~kG~I~~l~ 97 (108)
||+|+|+||+++++++++ +|||+|||||++..|+||+++.+. ..++|+|++-.
T Consensus 1 ~k~g~l~Kr~~~~~~~~~--~nwKkRwFvL~~~~L~Yyk~~~~~~~~~kG~I~L~~ 54 (106)
T cd01238 1 ILESILVKRSQQKKKTSP--LNYKERLFVLTKSKLSYYEGDFEKRGSKKGSIDLSK 54 (106)
T ss_pred CcceeeeeeccCCCCCCC--CCceeEEEEEcCCEEEEECCCcccccCcceeEECCc
Confidence 689999999999999999 999999999999999999988763 34589987654
No 2
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=99.35 E-value=1.1e-12 Score=89.81 Aligned_cols=45 Identities=24% Similarity=0.623 Sum_probs=38.1
Q ss_pred eeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCCcccccceEEec
Q psy17477 44 RQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSEIFLSGIRLSD 95 (108)
Q Consensus 44 keG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ek~~~kG~I~~ 95 (108)
|+|||.|+|+... ++||+|||||+++.|.||+++.+.. .+|.|++
T Consensus 1 KeG~L~K~g~~~~------k~wkkRwFvL~~~~L~Yyk~~~d~~-~~G~I~L 45 (103)
T cd01251 1 KEGFMEKTGPKHT------EGFKKRWFTLDDRRLMYFKDPLDAF-AKGEVFL 45 (103)
T ss_pred CceeEEecCCCCC------CCceeEEEEEeCCEEEEECCCCCcC-cCcEEEe
Confidence 6899999998632 5999999999999999999987653 4888865
No 3
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=99.34 E-value=1.9e-12 Score=87.80 Aligned_cols=48 Identities=15% Similarity=0.259 Sum_probs=40.0
Q ss_pred ceeeeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCCcccccceEEecC
Q psy17477 41 DILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSEIFLSGIRLSDL 96 (108)
Q Consensus 41 ~vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ek~~~kG~I~~l 96 (108)
.|+|+|||.|+|+.. ++||+|||||++..|.||+++++.. +.|.|++-
T Consensus 1 ~v~k~G~L~Kkg~~~-------k~WkkRwfvL~~~~L~yyk~~~~~~-~~~~I~L~ 48 (100)
T cd01233 1 VVSKKGYLNFPEETN-------SGWTRRFVVVRRPYLHIYRSDKDPV-ERGVINLS 48 (100)
T ss_pred CcceeEEEEeeCCCC-------CCcEEEEEEEECCEEEEEccCCCcc-EeeEEEec
Confidence 478999999999876 5999999999999999999987653 36666643
No 4
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.28 E-value=4.9e-12 Score=86.91 Aligned_cols=46 Identities=22% Similarity=0.204 Sum_probs=38.1
Q ss_pred eeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCCcccccceEEec
Q psy17477 45 QGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSEIFLSGIRLSD 95 (108)
Q Consensus 45 eG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ek~~~kG~I~~ 95 (108)
.|.|+||+++.++++. |||+|||||+.+.|+||+.+..+ .+|+|++
T Consensus 4 ~~~~~kr~~~~~~~~~---n~KkRwF~Lt~~~L~Y~k~~~~~--~~g~I~L 49 (98)
T cd01244 4 NLQQVDRSRLAWKKVL---HFKKRYFQLTTTHLSWAKDVQCK--KSALIKL 49 (98)
T ss_pred ccEEEEcccCCCccCc---CCceeEEEECCCEEEEECCCCCc--eeeeEEc
Confidence 4788999999888777 99999999999999999987643 3676554
No 5
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=99.22 E-value=1.8e-11 Score=81.19 Aligned_cols=45 Identities=31% Similarity=0.524 Sum_probs=36.8
Q ss_pred eeeeEeecCCccccccCCCCceeEEEEeCC--CceeeeecCCcccccceEEecCC
Q psy17477 45 QGFLIKRSQNKKRFSTSNNNYKQRWFVLTT--KHLIYYDTDSEIFLSGIRLSDLP 97 (108)
Q Consensus 45 eG~L~Krg~~~k~~~~~~~nwK~RwFVLt~--~~LsYYk~~~ek~~~kG~I~~l~ 97 (108)
+|||.|+|... ++||+|||||++ ..|.||+++.+.. ++|.|++-.
T Consensus 2 ~G~L~K~g~~~-------k~WkkRwFvL~~~~~~L~Yy~~~~~~~-~~g~I~L~~ 48 (101)
T cd01235 2 EGYLYKRGALL-------KGWKPRWFVLDPDKHQLRYYDDFEDTA-EKGCIDLAE 48 (101)
T ss_pred eEEEEEcCCCC-------CCccceEEEEECCCCEEEEecCCCCCc-cceEEEcce
Confidence 79999999766 599999999995 4899999886553 478887653
No 6
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt
Probab=99.21 E-value=2.3e-11 Score=81.89 Aligned_cols=46 Identities=26% Similarity=0.360 Sum_probs=38.9
Q ss_pred eeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCCccc-ccceEEecCC
Q psy17477 45 QGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSEIF-LSGIRLSDLP 97 (108)
Q Consensus 45 eG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ek~-~~kG~I~~l~ 97 (108)
+|||.|++... ++||+|||||++..|+||+++.+.. .++|.|++-.
T Consensus 2 ~G~L~K~~~~~-------k~Wk~RwFvL~~g~L~Yyk~~~~~~~~~~G~I~L~~ 48 (91)
T cd01247 2 NGVLSKWTNYI-------NGWQDRYFVLKEGNLSYYKSEAEKSHGCRGSIFLKK 48 (91)
T ss_pred ceEEEEecccc-------CCCceEEEEEECCEEEEEecCccCcCCCcEEEECcc
Confidence 79999999887 5999999999999999999987542 3579887653
No 7
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.11 E-value=1.2e-10 Score=81.31 Aligned_cols=45 Identities=27% Similarity=0.558 Sum_probs=37.1
Q ss_pred eeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCCcccccceEEecC
Q psy17477 44 RQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSEIFLSGIRLSDL 96 (108)
Q Consensus 44 keG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ek~~~kG~I~~l 96 (108)
|+|||.|+|... ++||+|||||+.+.|.||+++.+.. ++|.|++-
T Consensus 2 k~G~L~K~~~~~-------~~WkkRwfvL~~~~L~yyk~~~~~~-~~g~I~L~ 46 (125)
T cd01252 2 REGWLLKQGGRV-------KTWKRRWFILTDNCLYYFEYTTDKE-PRGIIPLE 46 (125)
T ss_pred cEEEEEEeCCCC-------CCeEeEEEEEECCEEEEEcCCCCCC-ceEEEECC
Confidence 789999999776 5999999999999999999876553 36666543
No 8
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=99.05 E-value=2.8e-10 Score=77.98 Aligned_cols=49 Identities=24% Similarity=0.373 Sum_probs=37.9
Q ss_pred eeeeEeecCCccccccCCCCceeEEEEeCCCc-------eeeeecCCcccccceEEecCC
Q psy17477 45 QGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKH-------LIYYDTDSEIFLSGIRLSDLP 97 (108)
Q Consensus 45 eG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~-------LsYYk~~~ek~~~kG~I~~l~ 97 (108)
+|||.|+|...+ +++ ++||+|||||++.. |.||+++.+.. .+|.|++-.
T Consensus 2 eGwL~K~~~~~~-~~~--~~WkrRwFvL~~~~l~~~~~~L~Yyk~~~~~k-~~g~I~L~~ 57 (108)
T cd01266 2 EGWLKKSPPYKL-LFR--TKWVRRYFVLHCGDRERNLFALEYYKTSRKFK-LEFVIDLES 57 (108)
T ss_pred ceeeeeCCcccc-ccc--cCcEEEEEEEeccccCCCcceEEEECCCCCCc-cceEEECCc
Confidence 799999987543 344 69999999999877 49999876543 478887654
No 9
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.05 E-value=2.4e-10 Score=79.26 Aligned_cols=48 Identities=19% Similarity=0.314 Sum_probs=35.9
Q ss_pred eeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCCcccccceEEec
Q psy17477 44 RQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSEIFLSGIRLSD 95 (108)
Q Consensus 44 keG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ek~~~kG~I~~ 95 (108)
.+|+|.|+|...+ + . ++|++|||+|+.+.|+||+...+.+...|.|++
T Consensus 2 ~~G~l~k~~g~~r-~-~--K~WkrRwF~L~~~~L~y~K~~~~~~~~~g~IdL 49 (101)
T cd01264 2 IEGQLKEKKGRWR-F-I--KRWKTRYFTLSGAQLLFQKGKSKDDPDDCSIDL 49 (101)
T ss_pred cceEEeecCccce-e-e--ecceeEEEEEeCCEEEEEeccCccCCCCceEEc
Confidence 4899999987311 1 1 599999999999999999987644333466654
No 10
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.02 E-value=4.1e-10 Score=75.87 Aligned_cols=46 Identities=26% Similarity=0.349 Sum_probs=35.9
Q ss_pred eeeeEeecCC-ccccccCCCCceeEEEEeC--CCceeeeecCCcccccceEEecCC
Q psy17477 45 QGFLIKRSQN-KKRFSTSNNNYKQRWFVLT--TKHLIYYDTDSEIFLSGIRLSDLP 97 (108)
Q Consensus 45 eG~L~Krg~~-~k~~~~~~~nwK~RwFVLt--~~~LsYYk~~~ek~~~kG~I~~l~ 97 (108)
.|||+|+|.. .. ++||+|||||+ ...|.||+++.+.. +.|.|++-.
T Consensus 2 ~GyL~K~g~~~~~------K~WkkRWFvL~~~~~~L~Yyk~~~d~~-p~G~I~L~~ 50 (95)
T cd01265 2 CGYLHKIEGKGPL------RGRRSRWFALDDRTCYLYYYKDSQDAK-PLGRVDLSG 50 (95)
T ss_pred cccEEEecCCCCC------cCceeEEEEEcCCCcEEEEECCCCccc-ccceEECCc
Confidence 6999999863 21 69999999997 45799999987654 478887653
No 11
>cd01241 PH_Akt Akt pleckstrin homology (PH) domain. Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.00 E-value=6e-10 Score=75.95 Aligned_cols=36 Identities=25% Similarity=0.623 Sum_probs=31.3
Q ss_pred eeeeeeeEeecCCccccccCCCCceeEEEEeC-CCceeeeecCC
Q psy17477 42 ILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLT-TKHLIYYDTDS 84 (108)
Q Consensus 42 vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt-~~~LsYYk~~~ 84 (108)
++|+|||.|+|... ++||+|||||+ ...|.||+...
T Consensus 1 v~k~G~L~K~g~~~-------~~Wk~R~f~L~~~~~l~~yk~~~ 37 (102)
T cd01241 1 VVKEGWLHKRGEYI-------KTWRPRYFLLKSDGSFIGYKEKP 37 (102)
T ss_pred CcEEEEEEeecCCC-------CCCeeEEEEEeCCCeEEEEecCC
Confidence 57999999999877 59999999999 67899888654
No 12
>KOG2059|consensus
Probab=99.00 E-value=3.2e-10 Score=99.76 Aligned_cols=86 Identities=28% Similarity=0.455 Sum_probs=70.3
Q ss_pred cchhhHHHHHHhhhccCCCCCCCCCCCcccceeeeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCCcccccc
Q psy17477 11 TNPVAAATFLDLEDESGKCGMANKDDLISDDILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSEIFLSG 90 (108)
Q Consensus 11 ~~~~~v~~fl~~i~~~~~~~~~~~~~~~~~~vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ek~~~k 90 (108)
+-+++++.||+.|++.+......++ .+.++|+|.|.||.++++++++ +|||+|||.||.++|+|.|+++... +
T Consensus 537 ~~~~~~~~fld~is~~~~~~~~~p~---~p~v~k~glm~kr~~gr~~~~~--~~FKKryf~LT~~~Ls~~Ksp~~q~--~ 609 (800)
T KOG2059|consen 537 QHFIAVKVFLDEISSVGDRSSLSPQ---EPVVLKEGLMIKRAQGRGRFGK--KNFKKRYFRLTTEELSYAKSPGKQP--I 609 (800)
T ss_pred HhHHHHHhhhhcccccccccccCCC---CCceecccceEeccccccchhh--hhhhheEEEeccceeEEecCCccCc--c
Confidence 3467889999999877776543344 7999999999999999999999 9999999999999999999987543 4
Q ss_pred eE--------EecCCCCcccc
Q psy17477 91 IR--------LSDLPDQIFHD 103 (108)
Q Consensus 91 G~--------I~~l~d~~f~~ 103 (108)
+. ++-|.|++|+.
T Consensus 610 ~~Ipl~nI~avEklee~sF~~ 630 (800)
T KOG2059|consen 610 YTIPLSNIRAVEKLEEKSFKM 630 (800)
T ss_pred cceeHHHHHHHHHhhhhccCC
Confidence 54 45577777764
No 13
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=98.99 E-value=7e-10 Score=76.59 Aligned_cols=44 Identities=25% Similarity=0.504 Sum_probs=34.2
Q ss_pred ceeeeeeeEeecCCccccccCCCCceeEEEEeCCC------ceeeeecCCc---c-cccceEEec
Q psy17477 41 DILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTK------HLIYYDTDSE---I-FLSGIRLSD 95 (108)
Q Consensus 41 ~vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~------~LsYYk~~~e---k-~~~kG~I~~ 95 (108)
+|+++|||.|++ +||+|||||+.. .|.||+++++ . ...+|.|++
T Consensus 1 ~v~k~GyL~K~K-----------~~kkRwFVLr~~~~~~p~~Leyyk~ek~~~~~~~~p~~vI~L 54 (101)
T cd01257 1 DVRKSGYLRKQK-----------SMHKRFFVLRAESSGGPARLEYYENEKKFLQKGSAPKRVIPL 54 (101)
T ss_pred CccEEEEEeEec-----------CcEeEEEEEecCCCCCCceEEEECChhhccccCCCceEEEEc
Confidence 578999999972 999999999976 6999999763 1 223666654
No 14
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.98 E-value=7.2e-10 Score=77.01 Aligned_cols=49 Identities=18% Similarity=0.361 Sum_probs=35.0
Q ss_pred eeeeeEeecCCcc----ccccCCCCceeEEEEeCC-CceeeeecCC-cccccceEEec
Q psy17477 44 RQGFLIKRSQNKK----RFSTSNNNYKQRWFVLTT-KHLIYYDTDS-EIFLSGIRLSD 95 (108)
Q Consensus 44 keG~L~Krg~~~k----~~~~~~~nwK~RwFVLt~-~~LsYYk~~~-ek~~~kG~I~~ 95 (108)
+.|||.|.+.+.. .... ++||+|||||+. ..|.||+... +. ..+|.|++
T Consensus 1 ~~g~l~~~~~~~~~~~~~~~~--K~WkrRWFvL~~~~~L~y~~d~~~~~-~p~G~IdL 55 (104)
T cd01236 1 YCGWLLVAPDGTDFDNPVHRS--KRWQRRWFILYDHGLLTYALDEMPTT-LPQGTIDM 55 (104)
T ss_pred CcceeEEcCCCCcccccceee--ccccceEEEEeCCCEEEEeeCCCCCc-ccceEEEc
Confidence 5799999998864 2456 899999999985 5566665442 32 23788776
No 15
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=98.95 E-value=1.8e-09 Score=71.63 Aligned_cols=50 Identities=22% Similarity=0.337 Sum_probs=38.5
Q ss_pred eeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCCcccccceEEecCC
Q psy17477 44 RQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSEIFLSGIRLSDLP 97 (108)
Q Consensus 44 keG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ek~~~kG~I~~l~ 97 (108)
.+|+|.|++...+. .. ++|++|||||+++.|.||+++.+.. .+|.|++-.
T Consensus 2 ~~GwL~kk~~~~g~-~~--k~WkkrwfvL~~~~L~yyk~~~~~~-~~~~I~L~~ 51 (96)
T cd01260 2 CDGWLWKRKKPGGF-MG--QKWARRWFVLKGTTLYWYRSKQDEK-AEGLIFLSG 51 (96)
T ss_pred ceeEEEEecCCCCc-cc--cCceeEEEEEECCEEEEECCCCCCc-cceEEEccC
Confidence 48999999754322 22 5999999999999999999987553 377776554
No 16
>cd05134 RasGAP_RASA3 RASA3 (or GAP1_IP4BP) is a member of the GAP1 family and has been shown to specifically bind 1,3,4,5-tetrakisphosphate (IP4). Thus, RASA3 may function as an IP4 receptor. The members of GAP1 family are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. Purified RASA3 stimulates GAP activity on Ras with about a five-fold lower potency than p120RasGAP, but shows no GAP-stimulating activity at all against Rac or Rab3A.
Probab=98.93 E-value=2.1e-10 Score=92.74 Aligned_cols=69 Identities=36% Similarity=0.581 Sum_probs=55.2
Q ss_pred CCCCCCCCCCc-chhhHHHHHHhhhccCCCCCCCCCCCcccceeeeeeeEeecCCccccccCCCCceeEEEEeCC
Q psy17477 1 MPELNPTSLWT-NPVAAATFLDLEDESGKCGMANKDDLISDDILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTT 74 (108)
Q Consensus 1 ~~~~~~~~~~~-~~~~v~~fl~~i~~~~~~~~~~~~~~~~~~vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~ 74 (108)
|-++||.-.-+ ...+|++||+.|++.+.......+ .+.++|+|+|+||+++++++++ +|||+|||+||.
T Consensus 241 M~~~~~f~~~~~~~~~~~~FL~~is~~~~~~~~~~~---~~~~~~~~~~~~r~~~~~~~~~--~~~k~r~~~lt~ 310 (310)
T cd05134 241 MAAFYDYFNEQKYADAVKNFLDLISSSGRRDHKSIE---QPILLKEGFMIKRAQGRKRFGM--KNFKKRWFRLTN 310 (310)
T ss_pred HHhhCHHHHhhhhHHHHHHHHHHHhCCCCCCccccC---CcchhhhhhHHHhcccCCcccc--cchhheeeecCC
Confidence 44567765444 467899999999977665433333 6889999999999999999999 999999999984
No 17
>cd05394 RasGAP_RASA2 RASA2 (or GAP1(m)) is a member of the GAP1 family of Ras GTPase-activating proteins that includes GAP1_IP4BP (or RASA3), CAPRI, and RASAL. In vitro, RASA2 has been shown to bind inositol 1,3,4,5-tetrakisphosphate (IP4), the water soluble inositol head group of the lipid second messenger phosphatidylinositol 3,4,5-trisphosphate (PIP3). In vivo studies also demonstrated that RASA2 binds PIP3, and it is recruited to the plasma membrane following agonist stimulation of PI 3-kinase. Furthermore, the membrane translocation is a consequence of the ability of its pleckstrin homology (PH) domain to bind PIP3.
Probab=98.92 E-value=1.1e-10 Score=94.68 Aligned_cols=67 Identities=25% Similarity=0.371 Sum_probs=53.1
Q ss_pred CCCCCCCCcc-hhhHHHHHHhhhccCCCCCCCCCCCcccceeeeeeeEeecCCccccccCCCCceeEEEEeCC
Q psy17477 3 ELNPTSLWTN-PVAAATFLDLEDESGKCGMANKDDLISDDILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTT 74 (108)
Q Consensus 3 ~~~~~~~~~~-~~~v~~fl~~i~~~~~~~~~~~~~~~~~~vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~ 74 (108)
++||.-.-++ ..+|++||+.|++.....++... .+.++|||+|+||++|++++|+ +|||+|||+||.
T Consensus 246 ~~~~~~~~~~~~~~v~~FLd~Is~~~~~~~~~~~---~~~~~~e~~~~~r~~~~~~~~~--~~~kkr~~~l~~ 313 (313)
T cd05394 246 EFFKMFQEETYTKVVKKFLDEISSTETKEPSGVS---EPVHLKEGEMYKRAQGRTRIGK--KNFKKRWFCLTS 313 (313)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCC---CchhhHHHHHHhhccCCCcccc--ccchhheeecCC
Confidence 4555422223 35799999999977766554444 6888999999999999999999 999999999984
No 18
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.88 E-value=2.9e-09 Score=74.88 Aligned_cols=55 Identities=27% Similarity=0.457 Sum_probs=42.7
Q ss_pred eeeeeEeecCCcccccc-----------CCCCceeEEEEeCCCceeeeecCCcccccceEEecCCCCcc
Q psy17477 44 RQGFLIKRSQNKKRFST-----------SNNNYKQRWFVLTTKHLIYYDTDSEIFLSGIRLSDLPDQIF 101 (108)
Q Consensus 44 keG~L~Krg~~~k~~~~-----------~~~nwK~RwFVLt~~~LsYYk~~~ek~~~kG~I~~l~d~~f 101 (108)
||||+.||+.++..... ...+|++|||||++..|.||+++.+.. .+|.|.. |..|
T Consensus 1 keG~i~kr~g~~~~~~~~~~~~~~~~~~~~~~w~kRWFvlr~s~L~Y~~~~~~~~-~~~vil~--D~~f 66 (121)
T cd01254 1 KEGYIMKRSGGKRSGSDDCSFGCCCFCRMCDRWQKRWFIVKESFLAYMDDPSSAQ-ILDVILF--DVDF 66 (121)
T ss_pred CCceEEeCCCCCcCCcccccccccCCcccccCCcceeEEEeCCEEEEEcCCCCCc-eeeEEEE--cCCc
Confidence 69999999988765443 112799999999999999999987743 3777776 5555
No 19
>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.79 E-value=4.2e-09 Score=72.61 Aligned_cols=44 Identities=18% Similarity=0.256 Sum_probs=34.5
Q ss_pred eeeeeEeecCCccccccCCCCceeEEEEeCC----CceeeeecCCcccccceEEe
Q psy17477 44 RQGFLIKRSQNKKRFSTSNNNYKQRWFVLTT----KHLIYYDTDSEIFLSGIRLS 94 (108)
Q Consensus 44 keG~L~Krg~~~k~~~~~~~nwK~RwFVLt~----~~LsYYk~~~ek~~~kG~I~ 94 (108)
+.|||+|+|.... ++||+|||+|+. ..|+||+...+.. .+|.|+
T Consensus 1 ~~G~l~K~g~~~~------K~wK~rwF~l~~~~s~~~l~yf~~~~~~~-p~gli~ 48 (98)
T cd01245 1 KKGNLLKRTKSVT------KLWKTLYFALILDGSRSHESLLSSPKKTK-PIGLID 48 (98)
T ss_pred CCCccccCCCCcc------cccceeEEEEecCCCCceEEEEcCCCCCC-ccceee
Confidence 4699999997622 699999999986 9999999887654 256433
No 20
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=98.78 E-value=1.9e-08 Score=64.01 Aligned_cols=47 Identities=26% Similarity=0.562 Sum_probs=37.2
Q ss_pred eeeeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCCc--ccccceEEec
Q psy17477 42 ILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSE--IFLSGIRLSD 95 (108)
Q Consensus 42 vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~e--k~~~kG~I~~ 95 (108)
++++|+|.+++... ..|++|||||++..|.||+.+.+ .....+.|.+
T Consensus 1 ~~~~G~L~~~~~~~-------~~wk~r~~vL~~~~L~~~~~~~~~~~~~~~~~i~l 49 (104)
T PF00169_consen 1 CIKEGWLLKKSSSR-------KKWKKRYFVLRDSYLLYYKSSKDKSDSKPKGSIPL 49 (104)
T ss_dssp EEEEEEEEEEESSS-------SSEEEEEEEEETTEEEEESSTTTTTESSESEEEEG
T ss_pred CEEEEEEEEECCCC-------CCeEEEEEEEECCEEEEEecCccccceeeeEEEEe
Confidence 57999999999554 59999999999999999999873 2223555544
No 21
>KOG0930|consensus
Probab=98.72 E-value=2e-08 Score=81.78 Aligned_cols=45 Identities=29% Similarity=0.598 Sum_probs=38.8
Q ss_pred eeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCCcccccceEEec
Q psy17477 44 RQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSEIFLSGIRLSD 95 (108)
Q Consensus 44 keG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ek~~~kG~I~~ 95 (108)
+||||.|.|+++- ++||+|||+||.+.|.||+.-.++. .+|.|.+
T Consensus 262 REGWLlKlgg~rv------ktWKrRWFiLtdNCLYYFe~tTDKE-PrGIIpL 306 (395)
T KOG0930|consen 262 REGWLLKLGGNRV------KTWKRRWFILTDNCLYYFEYTTDKE-PRGIIPL 306 (395)
T ss_pred ccceeeeecCCcc------cchhheeEEeecceeeeeeeccCCC-CCcceec
Confidence 7999999998754 7999999999999999999887775 4788764
No 22
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.69 E-value=3.7e-08 Score=63.25 Aligned_cols=46 Identities=26% Similarity=0.467 Sum_probs=35.6
Q ss_pred eeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCCccc-ccceEEecC
Q psy17477 44 RQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSEIF-LSGIRLSDL 96 (108)
Q Consensus 44 keG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ek~-~~kG~I~~l 96 (108)
.+|||.|++... ..|++|||||+...|.||+.+.+.. ...|.|.+-
T Consensus 1 ~~G~L~k~~~~~-------~~W~~r~~vl~~~~L~~~~~~~~~~~~~~~~i~l~ 47 (91)
T cd01246 1 VEGWLLKWTNYL-------KGWQKRWFVLDNGLLSYYKNKSSMRGKPRGTILLS 47 (91)
T ss_pred CeEEEEEecccC-------CCceeeEEEEECCEEEEEecCccCCCCceEEEEec
Confidence 489999998765 5999999999999999999886431 235655543
No 23
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.67 E-value=4.6e-08 Score=63.15 Aligned_cols=36 Identities=39% Similarity=0.786 Sum_probs=30.6
Q ss_pred eeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCCc
Q psy17477 44 RQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSE 85 (108)
Q Consensus 44 keG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~e 85 (108)
++|||.|++.+.. ..|++|||||+...|.||+...+
T Consensus 1 k~G~L~kk~~~~~------~~W~kr~~~L~~~~l~~y~~~~~ 36 (94)
T cd01250 1 KQGYLYKRSSKSN------KEWKKRWFVLKNGQLTYHHRLKD 36 (94)
T ss_pred CcceEEEECCCcC------CCceEEEEEEeCCeEEEEcCCcc
Confidence 5899999886522 59999999999999999998764
No 24
>cd05128 RasGAP_GAP1_like The GAP1 family of Ras GTPase-activating proteins includes GAP1(m) (or RASA2), GAP1_IP4BP (or RASA3), Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), and Ras GTPase activating-like proteins (RASAL) or RASAL1. The members are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin homology domain that is associated with a Bruton's tyrosine kinase motif. While this domain structure is conserved, a small change in the function of each individual domain and the interaction between domains has a marked effect on the regulation of each protein.
Probab=98.63 E-value=9.4e-09 Score=83.08 Aligned_cols=61 Identities=30% Similarity=0.511 Sum_probs=49.4
Q ss_pred cchhhHHHHHHhhhccCCCCCCCC--CCCcccceeeeeeeEeecCCccccccCCCCceeEEEEeC
Q psy17477 11 TNPVAAATFLDLEDESGKCGMANK--DDLISDDILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLT 73 (108)
Q Consensus 11 ~~~~~v~~fl~~i~~~~~~~~~~~--~~~~~~~vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt 73 (108)
++..+|+.||+.+++..+.....+ .....+.++|||+|.||.+|++++++ +|||+|||+||
T Consensus 253 ~~~~~~~~fL~~is~v~~~ee~~~~~~~~~~~~~~k~g~~~~~~~~~~~~~~--~~~k~r~~~lt 315 (315)
T cd05128 253 QYVSAVKDFLDRISSTEEREESLPARSSFLEPVVLKEGFMIKRAQGRGRLGR--KNFKKRYFRLT 315 (315)
T ss_pred HHHHHHHHHHHHHcCCCChhhccccccCCCCchhhhhhhhHhhcccCCCccc--cchhheeeecC
Confidence 467889999999998887742111 11227899999999999999999999 99999999997
No 25
>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain. Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.45 E-value=2.5e-07 Score=65.03 Aligned_cols=48 Identities=29% Similarity=0.472 Sum_probs=36.7
Q ss_pred eeeeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCCcccccceEEec
Q psy17477 42 ILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSEIFLSGIRLSD 95 (108)
Q Consensus 42 vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ek~~~kG~I~~ 95 (108)
+|+.|||.-...+.-+ .--|+||||||.+.|+||+...++.+ ||.|++
T Consensus 1 virkgwl~~~n~~~m~-----ggsK~~WFVLt~~~L~wykd~eeKE~-kyilpL 48 (110)
T cd01256 1 VIRKGWLSISNVGIMK-----GGSKDYWFVLTSESLSWYKDDEEKEK-KYMLPL 48 (110)
T ss_pred CeeeeeEEeeccceec-----CCCcceEEEEecceeeeecccccccc-cceeec
Confidence 5789999886655432 24589999999999999998877653 677655
No 26
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=98.44 E-value=2.5e-07 Score=64.22 Aligned_cols=34 Identities=32% Similarity=0.737 Sum_probs=25.3
Q ss_pred eeeeeEeecCCccccccCCCCceeEEEEeC-CCceeeeecC
Q psy17477 44 RQGFLIKRSQNKKRFSTSNNNYKQRWFVLT-TKHLIYYDTD 83 (108)
Q Consensus 44 keG~L~Krg~~~k~~~~~~~nwK~RwFVLt-~~~LsYYk~~ 83 (108)
++|+|.|.+.... +.||+|||+|. ..-|+|||.+
T Consensus 1 k~G~l~K~~~~~~------kgWk~RwFiL~k~~~L~YyK~~ 35 (112)
T PF15413_consen 1 KEGYLYKWGNKFG------KGWKKRWFILRKDGVLSYYKIP 35 (112)
T ss_dssp EEEEEEE--TTS-------S--EEEEEEEE-TTEEEEESS-
T ss_pred CCceEEEecCCCC------cCccccEEEEEeCCEEEEeecc
Confidence 6899999887622 59999999999 9999999993
No 27
>PF15409 PH_8: Pleckstrin homology domain
Probab=98.44 E-value=2.9e-07 Score=62.77 Aligned_cols=44 Identities=23% Similarity=0.420 Sum_probs=35.5
Q ss_pred eeeEeecCCccccccCCCCceeEEEEe--CCCceeeeecCCcccccceEEecC
Q psy17477 46 GFLIKRSQNKKRFSTSNNNYKQRWFVL--TTKHLIYYDTDSEIFLSGIRLSDL 96 (108)
Q Consensus 46 G~L~Krg~~~k~~~~~~~nwK~RwFVL--t~~~LsYYk~~~ek~~~kG~I~~l 96 (108)
|+|.|+.+.+- +-|.+||||| ....|+||.++.+. .+.|+|++-
T Consensus 1 G~llKkrr~~l------qG~~kRyFvL~~~~G~LsYy~~~~~~-~~rGsi~v~ 46 (89)
T PF15409_consen 1 GWLLKKRRKPL------QGWHKRYFVLDFEKGTLSYYRNQNSG-KLRGSIDVS 46 (89)
T ss_pred CcceeeccccC------CCceeEEEEEEcCCcEEEEEecCCCC-eeEeEEEcc
Confidence 78899765553 7999999999 89999999988665 457887654
No 28
>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain. Anillin Pleckstrin homology (PH) domain. Anillin is an actin binding protein involved in cytokinesis. It has a C-terminal PH domain, which has been shown to be necessary, but not sufficient for targetting of anillin to ectopic septin containing foci . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.27 E-value=1.5e-06 Score=62.00 Aligned_cols=47 Identities=15% Similarity=0.243 Sum_probs=34.0
Q ss_pred eeeeeEe-e-cCCccccccCCCCceeEEEEeCCCceeeeecCCcc--cccceEEecCC
Q psy17477 44 RQGFLIK-R-SQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSEI--FLSGIRLSDLP 97 (108)
Q Consensus 44 keG~L~K-r-g~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ek--~~~kG~I~~l~ 97 (108)
..|||.- + .++. ++|++|||||++..|.||+.+.+. ..+.|.|++-.
T Consensus 3 ~~GfL~~~q~~~~~-------k~W~RRWFvL~g~~L~y~k~p~d~~~~~Plg~I~L~~ 53 (122)
T cd01263 3 YHGFLTMFEDTSGF-------GAWHRRWCALEGGEIKYWKYPDDEKRKGPTGLIDLST 53 (122)
T ss_pred cceeEEEEeccCCC-------CCceEEEEEEeCCEEEEEcCCCccccCCceEEEEhhh
Confidence 4688874 3 3333 699999999999999999987742 12357776543
No 29
>cd05135 RasGAP_RASAL Ras GTPase activating-like protein (RASAL) or RASAL1 is a member of the GAP1 family, and a Ca2+ sensor responding in-phase to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. It contains a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. RASAL, like Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), is a cytosolic protein that undergoes a rapid translocation to the plasma membrane in response to receptor-mediated elevation in the concentration of intracellular free Ca2+, a translocation that activates its ability to function as a RasGAP. However, unlike RASAL4, RASAL undergoes an oscillatory translocation to the plasma membrane that occurs in synchrony with repetitive Ca2+ spikes.
Probab=98.18 E-value=2.9e-07 Score=75.08 Aligned_cols=68 Identities=19% Similarity=0.339 Sum_probs=48.2
Q ss_pred CCCCCCCCcchhhHHHHHHhhhccCCCCCC-CCCC--CcccceeeeeeeEeecCCccc-cccCCCCceeEEEEeC
Q psy17477 3 ELNPTSLWTNPVAAATFLDLEDESGKCGMA-NKDD--LISDDILRQGFLIKRSQNKKR-FSTSNNNYKQRWFVLT 73 (108)
Q Consensus 3 ~~~~~~~~~~~~~v~~fl~~i~~~~~~~~~-~~~~--~~~~~vlkeG~L~Krg~~~k~-~~~~~~nwK~RwFVLt 73 (108)
+|||. .-++..+|+.||+.+.+...+..+ .+.. ...+.++|||+|+||.++.+. .++ .+||+|||+||
T Consensus 262 pln~F-i~~~~~~v~~FL~~l~~V~~~~~~~~~~~~~~~~~~~~~eg~~~~r~~~~~~~~~~--~~fkk~~f~l~ 333 (333)
T cd05135 262 PLHPF-IRQSVARVRDFLDRLIDIDHDIVSGLPQRALFLPSVTVKEGYLHKRKTEGPQLLTR--FAFKKRYFWLS 333 (333)
T ss_pred HHHHH-HHHHHHHHHHHHHHHcCCCcccccCCccccccCCCchhhhhHhhhccccCCCCccc--ccccceeeecC
Confidence 45554 236778999999999987766322 1211 225888999999999986553 345 57999999996
No 30
>KOG1090|consensus
Probab=98.13 E-value=9e-07 Score=81.28 Aligned_cols=57 Identities=25% Similarity=0.401 Sum_probs=47.1
Q ss_pred ccceeeeeeeEeecCCccccccCCCCceeEEEEeC--CCceeeeecCCcccccceEEecCCCCcccc
Q psy17477 39 SDDILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLT--TKHLIYYDTDSEIFLSGIRLSDLPDQIFHD 103 (108)
Q Consensus 39 ~~~vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt--~~~LsYYk~~~ek~~~kG~I~~l~d~~f~~ 103 (108)
..+-+.+|+|.|||... +-||.|||||. ++.|.||++..+.+ +||+|++..=++|.-
T Consensus 1631 teNr~~eG~LyKrGA~l-------K~Wk~RwFVLd~~khqlrYYd~~edt~-pkG~IdLaevesv~~ 1689 (1732)
T KOG1090|consen 1631 TENRIPEGYLYKRGAKL-------KLWKPRWFVLDPDKHQLRYYDDFEDTK-PKGCIDLAEVESVAL 1689 (1732)
T ss_pred ccccCcccchhhcchhh-------cccccceeEecCCccceeeeccccccc-ccchhhhhhhhhhcc
Confidence 56667799999999888 59999999996 49999999887553 599999987666643
No 31
>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain. Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.96 E-value=6.5e-06 Score=57.89 Aligned_cols=28 Identities=25% Similarity=0.727 Sum_probs=24.2
Q ss_pred ccccCCCCceeEEEEeCCCceeeeecCCcc
Q psy17477 57 RFSTSNNNYKQRWFVLTTKHLIYYDTDSEI 86 (108)
Q Consensus 57 ~~~~~~~nwK~RwFVLt~~~LsYYk~~~ek 86 (108)
+++. +.||+|||+|+...|+||+++.+.
T Consensus 14 ~~~~--K~~KrrwF~lk~~~L~YyK~kee~ 41 (106)
T cd01237 14 KLTL--KGYKQYWFTFRDTSISYYKSKEDS 41 (106)
T ss_pred hhhh--hhheeEEEEEeCCEEEEEccchhc
Confidence 4556 799999999999999999988754
No 32
>cd05395 RasGAP_RASA4 Ras GTPase activating-like 4 protein (RASAL4), also known as Ca2+ -promoted Ras inactivator (CAPRI), is a member of the GAP1 family. Members of the GAP1 family are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. RASAL4, like RASAL, is a cytosolic protein that undergoes a rapid translocation to the plasma membrane in response to a receptor-mediated elevation in the concentration of intracellular free Ca2+ ([Ca2+]i). However, unlike RASAL, RASAL4 does not sense oscillations in [Ca2+]i.
Probab=97.89 E-value=2.7e-06 Score=69.63 Aligned_cols=62 Identities=18% Similarity=0.327 Sum_probs=46.6
Q ss_pred cchhhHHHHHHhhhccCCCCCCCCCCC--cccceeeeeeeE-eecCCccccccCCCCceeEEEEeCC
Q psy17477 11 TNPVAAATFLDLEDESGKCGMANKDDL--ISDDILRQGFLI-KRSQNKKRFSTSNNNYKQRWFVLTT 74 (108)
Q Consensus 11 ~~~~~v~~fl~~i~~~~~~~~~~~~~~--~~~~vlkeG~L~-Krg~~~k~~~~~~~nwK~RwFVLt~ 74 (108)
++..+|+.||+.|.+..+.....+... ..+.++++|.+. ||.+|+..++. ++||+|||+||-
T Consensus 268 ~~~~~~~~FL~~i~~v~~~ee~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~ 332 (337)
T cd05395 268 QGITQLKDFITRLVNCEESEEELQTRMSLQCATMVKEGFLFLHRTKGKGPLMT--SPFKKLYFTLTC 332 (337)
T ss_pred HHHHHHHHHHHHHhCCCChhhcccccccCCcchHHHHHHHHHHhccCCCCccc--cchhhheeeeeh
Confidence 467889999999997777643211111 145556787777 99999999998 899999999993
No 33
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.88 E-value=3e-05 Score=52.65 Aligned_cols=36 Identities=22% Similarity=0.479 Sum_probs=31.8
Q ss_pred ceeeeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecC
Q psy17477 41 DILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTD 83 (108)
Q Consensus 41 ~vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~ 83 (108)
+.|+||+|.|.+... ++|+.|||.|-...|-|++..
T Consensus 1 e~ikeG~L~K~~~~~-------~~~k~RyffLFnd~Ll~~~~~ 36 (101)
T cd01219 1 ELLKEGSVLKISSTT-------EKTEERYLFLFNDLLLYCVPR 36 (101)
T ss_pred CcccceEEEEEecCC-------CCceeEEEEEeCCEEEEEEcc
Confidence 368999999999877 499999999999999999953
No 34
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=97.88 E-value=4.9e-05 Score=46.91 Aligned_cols=37 Identities=32% Similarity=0.787 Sum_probs=31.2
Q ss_pred eeeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCCc
Q psy17477 43 LRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSE 85 (108)
Q Consensus 43 lkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~e 85 (108)
+++|+|.+++.. +. ..|++|||+|.+..|.||+....
T Consensus 2 ~~~G~l~~~~~~----~~--~~~~~~~~~L~~~~l~~~~~~~~ 38 (102)
T smart00233 2 IKEGWLYKKSGG----KK--KSWKKRYFVLFNSTLLYYKSEKA 38 (102)
T ss_pred ceeEEEEEeCCC----cc--CCceEEEEEEECCEEEEEeCCCc
Confidence 689999998863 12 59999999999999999998753
No 35
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain. Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.84 E-value=2e-05 Score=52.76 Aligned_cols=37 Identities=24% Similarity=0.421 Sum_probs=27.9
Q ss_pred eeeeEee----cCCccccccCCCCceeEEEEeCCCceeeeecCC
Q psy17477 45 QGFLIKR----SQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDS 84 (108)
Q Consensus 45 eG~L~Kr----g~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ 84 (108)
||+|..| +.|++... .+|++|||||++..|.||+.++
T Consensus 2 ~g~l~rk~~~~~~g~~~~~---~~Wk~r~~vL~~~~L~~ykd~~ 42 (104)
T cd01253 2 EGSLERKHELESGGKKASN---RSWDNVYGVLCGQSLSFYKDEK 42 (104)
T ss_pred CceEeEEEEeecCCcccCC---CCcceEEEEEeCCEEEEEecCc
Confidence 6777743 33554333 5999999999999999999765
No 36
>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS is a calcium-dependent activator involved in secretion. It contains a central PH domain that binds to phosphoinositide 4,5 bisphosphate containing liposomes. However, membrane association may also be mediated by binding to phosphatidlyserine via general electrostatic interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.63 E-value=3.3e-05 Score=54.93 Aligned_cols=29 Identities=28% Similarity=0.442 Sum_probs=23.9
Q ss_pred eeeeeeEeecCCccccccCCCCceeEEEEeCCCce
Q psy17477 43 LRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHL 77 (108)
Q Consensus 43 lkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~L 77 (108)
.+.|||+|+|+... ++||+|||||..-+.
T Consensus 3 k~sGyL~k~Gg~~~------KkWKKRwFvL~qvsQ 31 (117)
T cd01234 3 KHCGYLYAIGKNVW------KKWKKRFFVLVQVSQ 31 (117)
T ss_pred ceeEEEEeccchhh------hhhheeEEEEEchhH
Confidence 48999999998544 699999999996443
No 37
>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.
Probab=97.18 E-value=0.00099 Score=46.45 Aligned_cols=49 Identities=27% Similarity=0.337 Sum_probs=34.3
Q ss_pred ccceeeeeeeEeecCCccccccCCCCceeEEEEeCCC-ceeeeecCCcccccceEEecCCC
Q psy17477 39 SDDILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTK-HLIYYDTDSEIFLSGIRLSDLPD 98 (108)
Q Consensus 39 ~~~vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~-~LsYYk~~~ek~~~kG~I~~l~d 98 (108)
...++++|++.|+.+- -.|+|||+||.. .|.|++..+.. +||.|..-++
T Consensus 10 ge~Il~~g~v~K~kgl---------~~kkR~liLTd~PrL~Yvdp~~~~--~KGeI~~~~~ 59 (104)
T PF14593_consen 10 GELILKQGYVKKRKGL---------FAKKRQLILTDGPRLFYVDPKKMV--LKGEIPWSKE 59 (104)
T ss_dssp T--EEEEEEEEEEETT---------EEEEEEEEEETTTEEEEEETTTTE--EEEEE--STT
T ss_pred CCeEEEEEEEEEeece---------EEEEEEEEEccCCEEEEEECCCCe--ECcEEecCCc
Confidence 4678999999998643 479999999987 77777765433 4788877654
No 38
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=97.06 E-value=0.0016 Score=40.03 Aligned_cols=39 Identities=28% Similarity=0.678 Sum_probs=30.5
Q ss_pred eeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCCcc
Q psy17477 45 QGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSEI 86 (108)
Q Consensus 45 eG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ek 86 (108)
+|++.+++..... +. ..|++|||+|+...|.||+.+.+.
T Consensus 2 ~g~l~~~~~~~~~-~~--~~w~~~~~~l~~~~l~~~~~~~~~ 40 (99)
T cd00900 2 EGYLLKLGSDDVS-KG--KRWKRRWFFLFDDGLLLYKSDDKK 40 (99)
T ss_pred ccEEEEeCCCccc-cc--cCceeeEEEEECCEEEEEEcCCCC
Confidence 6888888766421 12 589999999999999999988644
No 39
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.04 E-value=0.00075 Score=41.18 Aligned_cols=47 Identities=28% Similarity=0.614 Sum_probs=33.6
Q ss_pred eeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCCcc--cccceEEecC
Q psy17477 44 RQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSEI--FLSGIRLSDL 96 (108)
Q Consensus 44 keG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ek--~~~kG~I~~l 96 (108)
++|+|.+++... . ..|++|||+|.+..|.+|+..... ....+.|++.
T Consensus 1 ~~G~l~~~~~~~----~--~~w~~~~~~L~~~~l~~~~~~~~~~~~~~~~~i~l~ 49 (96)
T cd00821 1 KEGYLLKKTGKL----R--KGWKRRWFVLFNDLLLYYKKKSSKKSYKPKGSIPLS 49 (96)
T ss_pred CcchhhhhhChh----h--CCccEEEEEEECCEEEEEECCCCCcCCCCcceEEcC
Confidence 478888877554 1 489999999999999999977542 2234555443
No 40
>cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip consists of a Ras-associated domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.73 E-value=0.002 Score=45.94 Aligned_cols=32 Identities=28% Similarity=0.620 Sum_probs=27.5
Q ss_pred eeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecC
Q psy17477 45 QGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTD 83 (108)
Q Consensus 45 eG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~ 83 (108)
||+|+-|..++ +.||+|||+|+...|.|+-..
T Consensus 3 ~g~LylK~~gk-------KsWKk~~f~LR~SGLYy~~Kg 34 (114)
T cd01259 3 EGPLYLKADGK-------KSWKKYYFVLRSSGLYYFPKE 34 (114)
T ss_pred cceEEEccCCC-------ccceEEEEEEeCCeeEEccCC
Confidence 89999999888 599999999999999666543
No 41
>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.03 E-value=0.011 Score=41.85 Aligned_cols=39 Identities=18% Similarity=0.363 Sum_probs=30.5
Q ss_pred eeeeeEee----cCCccc-cccCCCCceeEEEEeCCCceeeeecCC
Q psy17477 44 RQGFLIKR----SQNKKR-FSTSNNNYKQRWFVLTTKHLIYYDTDS 84 (108)
Q Consensus 44 keG~L~Kr----g~~~k~-~~~~~~nwK~RwFVLt~~~LsYYk~~~ 84 (108)
|||+|..| +.+++. ++. .-|++||.||++..|..|+...
T Consensus 2 ~~g~l~RK~~~~~~~kk~~~~~--R~Wk~~y~vL~g~~L~~yKDe~ 45 (117)
T cd01230 2 KHGALMRKVHADPDCRKTPFGK--RSWKMFYGILRGLVLYLQKDEH 45 (117)
T ss_pred CCcEEEEEEEecCCCccCCCCC--CcceEEEEEEECCEEEEEccCc
Confidence 78888875 445543 333 5999999999999999999874
No 42
>KOG0690|consensus
Probab=95.87 E-value=0.0022 Score=54.24 Aligned_cols=38 Identities=29% Similarity=0.702 Sum_probs=31.0
Q ss_pred ccceeeeeeeEeecCCccccccCCCCceeEEEEeCC-CceeeeecC
Q psy17477 39 SDDILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTT-KHLIYYDTD 83 (108)
Q Consensus 39 ~~~vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~-~~LsYYk~~ 83 (108)
..++++||||+|||... +||+.|+|+|-. .++.=|+.+
T Consensus 12 ~~~vvkEgWlhKrGE~I-------knWRpRYF~l~~DG~~~Gyr~k 50 (516)
T KOG0690|consen 12 QEDVVKEGWLHKRGEHI-------KNWRPRYFLLFNDGTLLGYRSK 50 (516)
T ss_pred hhhhHHhhhHhhcchhh-------hcccceEEEEeeCCceEeeccC
Confidence 46789999999999998 499999999864 566666644
No 43
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=95.52 E-value=0.045 Score=39.47 Aligned_cols=54 Identities=17% Similarity=0.231 Sum_probs=40.0
Q ss_pred eeeeeEe-ecCCccccccCCCCceeEEEEeCCCceeeeecCCccccc----ceEEecCCCCcccc
Q psy17477 44 RQGFLIK-RSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSEIFLS----GIRLSDLPDQIFHD 103 (108)
Q Consensus 44 keG~L~K-rg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ek~~~----kG~I~~l~d~~f~~ 103 (108)
.||||.- +.++++ +.|+++|.||....+.+|+.+.++... --.|.++.|..|+-
T Consensus 4 ~EGwvkvP~~~~~k------rGW~r~~vVv~~~Kl~lYd~e~~k~~~p~~~~~~vLdlrD~~fsV 62 (122)
T cd01243 4 YEGHVKIPKPGGVK------KGWQRALVVVCDFKLFLYDIAEDRASQPSVVISQVLDMRDPEFSV 62 (122)
T ss_pred ceeeEeccCCCCcc------cCceEEEEEEeCCEEEEEeCCccccCCccCceeEEEEcCCCCEEE
Confidence 4899876 444544 699999999999999999977654311 12466888998874
No 44
>cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. PKD consists of 2 C1 domains, followed by a PH domain and a kinase domain. While the PKD PH domain has not been shown to bind phosphorylated inositol lipids and is not required for membrane translocation, it is required for nuclear export. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=95.13 E-value=0.034 Score=39.89 Aligned_cols=38 Identities=21% Similarity=0.505 Sum_probs=30.9
Q ss_pred eeeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCCccc
Q psy17477 43 LRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSEIF 87 (108)
Q Consensus 43 lkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ek~ 87 (108)
+|||||+----.- +++|+++++|....+++|.+..+.+
T Consensus 1 lkEGWmVHyT~~d-------~~rKRhYWrLDsK~Itlf~~e~~sk 38 (117)
T cd01239 1 LKEGWMVHYTSSD-------NRRKKHYWRLDSKAITLYQEESGSR 38 (117)
T ss_pred CccceEEEEecCc-------cceeeeEEEecCCeEEEEEcCCCCe
Confidence 5899998844333 5999999999999999999887554
No 45
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=94.53 E-value=0.12 Score=35.15 Aligned_cols=33 Identities=30% Similarity=0.554 Sum_probs=22.2
Q ss_pred ceeeeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeec
Q psy17477 41 DILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDT 82 (108)
Q Consensus 41 ~vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~ 82 (108)
..|+||.|+|.+.. ..++++|| |=.+-|-|+..
T Consensus 1 ~~ikEG~L~K~~~k--------~~~~R~~F-LFnD~LlY~~~ 33 (99)
T cd01220 1 EFIRQGCLLKLSKK--------GLQQRMFF-LFSDLLLYTSK 33 (99)
T ss_pred CeeeEEEEEEEeCC--------CCceEEEE-EccceEEEEEe
Confidence 36899999997742 35555555 44467777764
No 46
>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A.
Probab=93.84 E-value=0.11 Score=36.15 Aligned_cols=39 Identities=31% Similarity=0.575 Sum_probs=26.4
Q ss_pred eeeeeeEee----cCCccc-cccCCCCceeEEEEeCCCceeeeecC
Q psy17477 43 LRQGFLIKR----SQNKKR-FSTSNNNYKQRWFVLTTKHLIYYDTD 83 (108)
Q Consensus 43 lkeG~L~Kr----g~~~k~-~~~~~~nwK~RwFVLt~~~LsYYk~~ 83 (108)
.|||+|..| +.+++. ++. ..|+.-|.||++..|.+|+..
T Consensus 1 ~keG~l~RK~~~~~~gkk~~~~~--R~Wk~~y~vL~g~~L~~~k~~ 44 (119)
T PF15410_consen 1 YKEGILMRKHELESGGKKASRSK--RSWKQVYAVLQGGQLYFYKDE 44 (119)
T ss_dssp --EEEEEEEEEEECTTCC---S-----EEEEEEEEETTEEEEESSH
T ss_pred CceEEEEEEEEEcCCCCCcCCCC--CCccEEeEEEECCEEEEEccC
Confidence 378998885 344443 244 699999999999999999984
No 47
>PLN00188 enhanced disease resistance protein (EDR2); Provisional
Probab=93.61 E-value=0.12 Score=46.53 Aligned_cols=59 Identities=20% Similarity=0.433 Sum_probs=45.0
Q ss_pred ceeeeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCC-ccc--------ccceEEecCCCCcccc
Q psy17477 41 DILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDS-EIF--------LSGIRLSDLPDQIFHD 103 (108)
Q Consensus 41 ~vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~-ek~--------~~kG~I~~l~d~~f~~ 103 (108)
.+..||||.--|..+ +|. ...++|+|||.++.++|||.+. +.. ....+|+++.-+++|.
T Consensus 3 ~~~~eGW~y~~g~~k--ig~--~~~~~Ry~vl~~~~~~~yK~~P~~~~~pirs~~id~~~rVed~Gr~~~~g 70 (719)
T PLN00188 3 KVVYEGWMVRYGRRK--IGR--SYIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHG 70 (719)
T ss_pred cceEeeEEEEEcccc--ccc--ccceeEEEEEecchhhhcccCCccccccceeeccCCCceEeecCceEEcC
Confidence 456899999977554 677 8899999999999999999743 221 1156788888887775
No 48
>KOG3751|consensus
Probab=93.53 E-value=0.073 Score=46.78 Aligned_cols=32 Identities=34% Similarity=0.622 Sum_probs=28.0
Q ss_pred eeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeec
Q psy17477 44 RQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDT 82 (108)
Q Consensus 44 keG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~ 82 (108)
.+|+|+-|+.|+ +.||+-+|||+...|.|+-.
T Consensus 319 i~GfL~~K~dgk-------KsWKk~yf~LR~SGLYys~K 350 (622)
T KOG3751|consen 319 IQGFLYLKEDGK-------KSWKKHYFVLRRSGLYYSTK 350 (622)
T ss_pred ccceeeeccccc-------ccceeEEEEEecCcceEccC
Confidence 489999999999 59999999999999966543
No 49
>KOG0248|consensus
Probab=92.37 E-value=0.037 Score=50.04 Aligned_cols=38 Identities=13% Similarity=0.451 Sum_probs=29.8
Q ss_pred cceeeeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCC
Q psy17477 40 DDILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDS 84 (108)
Q Consensus 40 ~~vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ 84 (108)
...-+.||+.+-+... +.||+||||++....+||+.++
T Consensus 247 e~~ekSgy~~~~~s~~-------k~lkrr~~v~k~gqi~~y~~~~ 284 (936)
T KOG0248|consen 247 ETMEKSGYWTQLTSRI-------KSLKRRYVVFKNGQISFYRKHN 284 (936)
T ss_pred chhhcccchhcchHHH-------HHHHhHheeeccceEEEEEcCC
Confidence 3445789998887555 5889999999888888888766
No 50
>KOG1739|consensus
Probab=92.20 E-value=0.083 Score=46.17 Aligned_cols=50 Identities=22% Similarity=0.302 Sum_probs=36.8
Q ss_pred ccceeeeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCCcc-cccceEEec
Q psy17477 39 SDDILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSEI-FLSGIRLSD 95 (108)
Q Consensus 39 ~~~vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ek-~~~kG~I~~ 95 (108)
.+-+-..|+|.|---.. .-|..|||||+...|+||++..+. ..|.|+|-+
T Consensus 21 dgw~e~~G~lskwtnyi-------~gwqdRyv~lk~g~Lsyykse~E~~hGcRgsi~l 71 (611)
T KOG1739|consen 21 DGWVERCGVLSKWTNYI-------HGWQDRYVVLKNGALSYYKSEDETEHGCRGSICL 71 (611)
T ss_pred CCchhhcceeeeeeccc-------ccccceEEEEcccchhhhhhhhhhhcccceeeEe
Confidence 34444567777755444 378999999999999999988754 357888754
No 51
>KOG1737|consensus
Probab=91.97 E-value=0.13 Score=46.73 Aligned_cols=47 Identities=28% Similarity=0.419 Sum_probs=35.4
Q ss_pred eeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCC-cccccceEEecCC
Q psy17477 44 RQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDS-EIFLSGIRLSDLP 97 (108)
Q Consensus 44 keG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~-ek~~~kG~I~~l~ 97 (108)
.+|+|.|.--.. +.|.+|||+|+...++||.... .+..++|.|.+..
T Consensus 79 ~~g~l~k~~n~~-------~~~~~r~f~l~~g~ls~~~~~~~~~~~~~~~~~~~~ 126 (799)
T KOG1737|consen 79 LEGILLKWRNYS-------KGPSSRWFVLSGGLLSYYFDNSFSKTTCGGGINLVT 126 (799)
T ss_pred ccceeecccccc-------CCcccceEEecCcceeeeccCCccccCCCCcccccc
Confidence 578888844333 4999999999999999998776 4445677776644
No 52
>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=91.41 E-value=0.6 Score=33.27 Aligned_cols=54 Identities=19% Similarity=0.493 Sum_probs=35.7
Q ss_pred eeeeeEeecC-CccccccCCCCceeEEEEeCCCceeeeecCCcccc-cceEEecCCCCccc
Q psy17477 44 RQGFLIKRSQ-NKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSEIFL-SGIRLSDLPDQIFH 102 (108)
Q Consensus 44 keG~L~Krg~-~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ek~~-~kG~I~~l~d~~f~ 102 (108)
.||||.-... +++ . . +.|+++|.||.+..+.+|+.+.++.. .-..|.++. ..||
T Consensus 2 lEGwlsvP~~~~~~-~-k--~gW~r~yvVv~~~Kl~lYd~e~~~~~~~p~~vldl~-~~fh 57 (112)
T cd01242 2 MEGWLSLPNRTNKS-R-K--PGWKKQYVVVSSRKILFYNDEQDKENSTPSMILDID-KLFH 57 (112)
T ss_pred cceeEEccCCCCcc-c-c--CCceEEEEEEeCCEEEEEecCccccCCCcEEEEEcc-ceee
Confidence 4888865332 331 0 1 58999999999999999998764431 133455554 4887
No 53
>cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta ARK1 is a G protein-coupled receptor kinase (GRK). It phosphorylates activated G-protein coupled receptors leading to the release of the previously bound heterotrimeric G protein agonist and thus signal termination. It consists of a domain found in regulators of G-protein signaling (RGS)(RH), a serine/threonine kinase domain and a C-terminal PH domain. The Beta-Ark 1 PH domain has an extended C-terminal helix, which mediates interactions with G beta gamma subunits. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or
Probab=91.12 E-value=0.049 Score=38.95 Aligned_cols=39 Identities=21% Similarity=0.401 Sum_probs=32.2
Q ss_pred ceeeeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCCc
Q psy17477 41 DILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSE 85 (108)
Q Consensus 41 ~vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~e 85 (108)
++|-.||+.|-|.-.- ..|.+|+|.|-|+.|.+|-...+
T Consensus 2 DcIvhGyi~KLGGPFl------s~WQ~Ry~~LfPNRLE~~~~~~~ 40 (116)
T cd01240 2 DCIVHGYIKKLGGPFL------SQWQTRYFKLYPNRLELYGESEA 40 (116)
T ss_pred ceEEeeehhhhCCHHH------HHHHHHHheeCcceeeecccccc
Confidence 6788999999886543 49999999999999999765444
No 54
>PLN02866 phospholipase D
Probab=90.87 E-value=0.36 Score=45.26 Aligned_cols=45 Identities=24% Similarity=0.586 Sum_probs=31.4
Q ss_pred eeeeeeeEee-----cC-Cccc-------cccCCCCceeEEEEeCCCceeeeecCCcc
Q psy17477 42 ILRQGFLIKR-----SQ-NKKR-------FSTSNNNYKQRWFVLTTKHLIYYDTDSEI 86 (108)
Q Consensus 42 vlkeG~L~Kr-----g~-~~k~-------~~~~~~nwK~RwFVLt~~~LsYYk~~~ek 86 (108)
-.||||+.|| ++ +.+. ++--+.+|.+|||||++..|.|.+.+.+.
T Consensus 182 K~~Eg~v~~r~~~~~~g~~~~~~~~~~~~~~~~~~~w~k~w~v~k~~~l~~~~~p~~~ 239 (1068)
T PLN02866 182 KLKEGYVMVKHLPKIPKSDDSRGCFPCCCFSCCNDNWQKVWAVLKPGFLALLEDPFDA 239 (1068)
T ss_pred CcceeEEEEeccCCCCCCCccCCccccccCCeecCchheeEEEEeccEEEEEecCCCC
Confidence 4689999999 22 1111 11133579999999999999999766533
No 55
>KOG3640|consensus
Probab=89.51 E-value=0.24 Score=46.14 Aligned_cols=50 Identities=14% Similarity=0.212 Sum_probs=36.9
Q ss_pred ccceeeeeeeEe--ecCCccccccCCCCceeEEEEeCCCceeeeecCC-cccc-cceEEec
Q psy17477 39 SDDILRQGFLIK--RSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDS-EIFL-SGIRLSD 95 (108)
Q Consensus 39 ~~~vlkeG~L~K--rg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~-ek~~-~kG~I~~ 95 (108)
..+|-..|+|+- -+.|. ..|.+||.+|....+.|++++. |+++ .-|.|++
T Consensus 987 ~idVEYrGFLtmfed~sgf-------GaWhRyWc~L~gg~I~fWk~PdDEkrK~Pig~IDL 1040 (1116)
T KOG3640|consen 987 AIDVEYRGFLTMFEDGSGF-------GAWHRYWCALHGGEIKFWKYPDDEKRKVPIGQIDL 1040 (1116)
T ss_pred ccceeeeeeeeeeeccCCC-------chhhhhhHHhcCCeeeeecCcchhcccCcceeeeh
Confidence 566777898887 34443 4799999999999999999997 4432 2466654
No 56
>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=86.47 E-value=1.7 Score=29.77 Aligned_cols=46 Identities=22% Similarity=0.155 Sum_probs=30.7
Q ss_pred eeeeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCCcccccceEEecCC
Q psy17477 42 ILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSEIFLSGIRLSDLP 97 (108)
Q Consensus 42 vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ek~~~kG~I~~l~ 97 (108)
++++|.+.||.+- .+|+|-++||...--+|=++... .+||.|+.-+
T Consensus 1 Il~~g~v~Kr~gl---------f~kkR~LiLTd~PrL~yvdp~~~-~~KgeIp~s~ 46 (89)
T cd01262 1 ILKIGAVKKRKGL---------FAKKRQLILTNGPRLIYVDPVKK-VVKGEIPWSD 46 (89)
T ss_pred Cceeeeeeehhcc---------ccceeeEEEecCceEEEEcCCcC-eEEeEecccc
Confidence 4678888887643 56999999998554444444333 3478776655
No 57
>cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain. Syntrophin pleckstrin homology (PH) domain. Syntrophins are peripheral membrane proteins, which associate with the Duchenne muscular dystrophy protein dystrophin and other proteins to form the dystrophin glycoprotein complex (DGC). There are five syntrophin isoforms, alpha1, beta1, beta2, gamma1, and gamma2. They all contain two PH domains, with the N-teminal PH domain interupted by a PDZ domain. The N-terminal PH domain of alpha1syntrophin binds phosphatidylinositol 4,5-bisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=80.82 E-value=2.2 Score=29.96 Aligned_cols=37 Identities=14% Similarity=0.458 Sum_probs=27.3
Q ss_pred eeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCC
Q psy17477 45 QGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDS 84 (108)
Q Consensus 45 eG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ 84 (108)
.||+..|-++-. -+. .+||.|+++|++..|..|+..-
T Consensus 2 mGW~~E~~~~~~-~~~--~~wrP~F~aL~~~dl~ly~s~P 38 (108)
T cd01258 2 IGWVNEQLSGDD-ESS--QRWRPRFLALKGSEFLFFETPP 38 (108)
T ss_pred ceecccccCCCC-ccc--cccceEEEEEcCCcEEEEeCCC
Confidence 477777644321 122 5999999999999999999765
No 58
>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain. Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=80.36 E-value=4.5 Score=27.89 Aligned_cols=32 Identities=31% Similarity=0.447 Sum_probs=26.5
Q ss_pred ceeeeeeeEeecCCccccccCCCCceeEEEEeCCCceeeee
Q psy17477 41 DILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYD 81 (108)
Q Consensus 41 ~vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk 81 (108)
..|+||.|+|-.. +.-+.|+|.|=.+-|-|-.
T Consensus 3 ~li~eG~L~K~~r---------k~~~~R~ffLFnD~LvY~~ 34 (104)
T cd01218 3 VLVGEGVLTKMCR---------KKPKQRQFFLFNDILVYGN 34 (104)
T ss_pred EEEecCcEEEeec---------CCCceEEEEEecCEEEEEE
Confidence 5789999999772 3678899999999999964
No 59
>KOG3723|consensus
Probab=79.98 E-value=0.75 Score=41.36 Aligned_cols=38 Identities=29% Similarity=0.542 Sum_probs=29.1
Q ss_pred eeeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCC
Q psy17477 43 LRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDS 84 (108)
Q Consensus 43 lkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ 84 (108)
+.||.|. ...|+.+|-+ .|+.|||.|.+..|.|-+...
T Consensus 736 ~iEGQLK-EKKGrWRf~k---RW~TrYFTLSgA~L~~~kg~s 773 (851)
T KOG3723|consen 736 LIEGQLK-EKKGRWRFIK---RWKTRYFTLSGAQLLFQKGKS 773 (851)
T ss_pred hhcchhh-hhccchhhhh---hhccceEEecchhhhcccCCC
Confidence 5678774 4445666666 899999999999999987553
No 60
>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain. Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=78.67 E-value=6.3 Score=27.64 Aligned_cols=37 Identities=14% Similarity=0.293 Sum_probs=30.6
Q ss_pred ceeeeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCC
Q psy17477 41 DILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDS 84 (108)
Q Consensus 41 ~vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ 84 (108)
+.|+||-|.|-+..+ ...++|+|-|=.+-|-|.+...
T Consensus 3 elI~EG~L~ki~~~~-------~~~q~R~~FLFd~~Li~CK~~~ 39 (112)
T cd01261 3 EFIMEGTLTRVGPSK-------KAKHERHVFLFDGLMVLCKSNH 39 (112)
T ss_pred cccccCcEEEEeccc-------CCcceEEEEEecCeEEEEEecc
Confidence 578999999987655 3778999999999999998654
No 61
>KOG0248|consensus
Probab=75.03 E-value=1 Score=41.18 Aligned_cols=52 Identities=13% Similarity=0.017 Sum_probs=36.5
Q ss_pred eeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCCcccccceEEecCCC--Cccccc
Q psy17477 44 RQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSEIFLSGIRLSDLPD--QIFHDI 104 (108)
Q Consensus 44 keG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ek~~~kG~I~~l~d--~~f~~~ 104 (108)
+-|+|.|+.... ++|+.|||++..+.+.||+++-+.. -|++++--. ..|++|
T Consensus 261 ~~k~lkrr~~v~-------k~gqi~~y~~~~~~~~~p~s~~d~~--s~~~~~~~~~s~~fqli 314 (936)
T KOG0248|consen 261 RIKSLKRRYVVF-------KNGQISFYRKHNNRDEEPASKIDIR--SVTKLEQQGAAYAFQLI 314 (936)
T ss_pred HHHHHHhHheee-------ccceEEEEEcCCCccccccCccccc--ccceeeccchhHHhhhh
Confidence 446666666555 6999999999999999999987654 455554332 345544
No 62
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=74.79 E-value=6.2 Score=32.67 Aligned_cols=35 Identities=26% Similarity=0.533 Sum_probs=28.4
Q ss_pred cccceeeeeeeEeecCCccccccCCCCceeEEEEeCCCceeee
Q psy17477 38 ISDDILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYY 80 (108)
Q Consensus 38 ~~~~vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYY 80 (108)
+..++..+|++.|.+... .|++|||.+....++..
T Consensus 373 v~sDv~~~G~l~k~~~~~--------~wk~ry~~l~~~~l~~~ 407 (478)
T PTZ00267 373 VTSDVTHGGYLYKYSSDM--------RWKKRYFYIGNGQLRIS 407 (478)
T ss_pred ecCCcccceEEeccCCCc--------chhhheEEecCCceEEE
Confidence 356788999999988764 69999999987666654
No 63
>KOG1117|consensus
Probab=74.04 E-value=2.1 Score=40.08 Aligned_cols=56 Identities=20% Similarity=0.440 Sum_probs=41.1
Q ss_pred ceeeeeeeEe-ecCCccccccCCCCceeEEEEeCCCceeeeecCCcccccceE--------EecCCCCccccc
Q psy17477 41 DILRQGFLIK-RSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSEIFLSGIR--------LSDLPDQIFHDI 104 (108)
Q Consensus 41 ~vlkeG~L~K-rg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ek~~~kG~--------I~~l~d~~f~~~ 104 (108)
-+++.|||-| ..|+. --+.+||..+.+.++.||.++++.-. ||. |....|+.|.-|
T Consensus 86 p~~~~gwldk~~pqg~-------~~~qkr~vkf~~~s~~yf~~~k~py~-k~~i~va~is~v~~~gd~kfevi 150 (1186)
T KOG1117|consen 86 PVIKSGWLDKLSPQGE-------YPFQKRWVKFDGSSLEYFLSPKDPYS-KGPIPVAAISAVRNFGDNKFEVI 150 (1186)
T ss_pred chhhcchhhccCcCcc-------cccCccceecCCCCccccCCCCCCCC-CCceeeehhhhhhhccCceEEEE
Confidence 3889999999 56665 37889999999999999998875421 444 444556666543
No 64
>KOG1738|consensus
Probab=70.75 E-value=1.2 Score=39.86 Aligned_cols=41 Identities=24% Similarity=0.502 Sum_probs=33.4
Q ss_pred eeeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCCccc
Q psy17477 43 LRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSEIF 87 (108)
Q Consensus 43 lkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ek~ 87 (108)
..+|++++++.. . ++. .-|++-||||..+.|..|.+...++
T Consensus 563 ~~qg~~~r~k~~-~-~~~--~kW~k~~~~l~~~~l~~y~n~~~~~ 603 (638)
T KOG1738|consen 563 DRQGWLTRLKLN-H-LTQ--EKWRKIWMVLNDDPLLNYRNHRVRA 603 (638)
T ss_pred hhhccchhhccc-h-HHH--HHhhhheeeecCchhhhhhhhhhhc
Confidence 458899998887 4 444 5999999999999999999876554
No 65
>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain. Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=62.38 E-value=27 Score=24.61 Aligned_cols=35 Identities=23% Similarity=0.329 Sum_probs=27.5
Q ss_pred eeeeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecC
Q psy17477 42 ILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTD 83 (108)
Q Consensus 42 vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~ 83 (108)
.|.+|-|.+.++.+ ..-+.|.|-|=.+.|-|.|..
T Consensus 2 li~~Gel~~~s~~~-------g~~q~R~~FLFD~~LI~CKkd 36 (109)
T cd01224 2 LFLQGEATRQKQNK-------GWNSSRVLFLFDHQMVLCKKD 36 (109)
T ss_pred ceEeeeEEEEeccc-------CCcccEEEEEecceEEEEecc
Confidence 57899999988643 234689999999999999954
No 66
>PF15404 PH_4: Pleckstrin homology domain
Probab=58.61 E-value=14 Score=28.17 Aligned_cols=31 Identities=23% Similarity=0.583 Sum_probs=26.7
Q ss_pred eeeeEeecCCccccccCCCCceeEEEEeCCCceeeeec
Q psy17477 45 QGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDT 82 (108)
Q Consensus 45 eG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~ 82 (108)
.|+|..|.... .+|+++++||.+..|--|..
T Consensus 2 sG~LY~K~~kh-------s~F~~~~vvL~~G~Li~f~~ 32 (185)
T PF15404_consen 2 SGYLYQKPRKH-------STFKKYFVVLIPGFLILFQL 32 (185)
T ss_pred CceeeecCCCC-------CCceEEEEEEeCCEEEEEEE
Confidence 58888887665 59999999999999988875
No 67
>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis. During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex
Probab=54.90 E-value=24 Score=24.48 Aligned_cols=35 Identities=14% Similarity=0.315 Sum_probs=22.0
Q ss_pred eeeEeecCCccccccCCCCceeEEEEeCC--Cceeeeec
Q psy17477 46 GFLIKRSQNKKRFSTSNNNYKQRWFVLTT--KHLIYYDT 82 (108)
Q Consensus 46 G~L~Krg~~~k~~~~~~~nwK~RwFVLt~--~~LsYYk~ 82 (108)
.||+|-....+..+. .+-.+|||.|.+ .+|.|...
T Consensus 13 ~~l~Ky~r~~~~~~~--~~~h~R~fwv~~~~~~L~Ws~~ 49 (123)
T PF12814_consen 13 EWLYKYTRKGRSGIS--EKPHRRYFWVDPYTRTLYWSSS 49 (123)
T ss_pred cEEEEEcccccCccC--CCcEEEEEEEeCCCCEEEecCC
Confidence 477783333233333 588999999998 55556553
No 68
>KOG3543|consensus
Probab=53.90 E-value=3.2 Score=38.08 Aligned_cols=33 Identities=24% Similarity=0.455 Sum_probs=26.4
Q ss_pred ccceeeeeeeEeecCCccccccCCCCceeEEEEeCCCce
Q psy17477 39 SDDILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHL 77 (108)
Q Consensus 39 ~~~vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~L 77 (108)
.+.+-..||++.-|++.. +.||+|+|||-..+.
T Consensus 461 p~nmkhsgylyaig~nvw------krwkkrffvlvqvsq 493 (1218)
T KOG3543|consen 461 PPNMKHSGYLYAIGRNVW------KRWKKRFFVLVQVSQ 493 (1218)
T ss_pred CCccccceeehhhhhHHH------HHhHhhEEEEEEhhh
Confidence 455567899999998876 789999999976444
No 69
>PTZ00486 apyrase Superfamily; Provisional
Probab=53.00 E-value=9.1 Score=32.11 Aligned_cols=52 Identities=17% Similarity=0.343 Sum_probs=34.6
Q ss_pred eeeeEeecCCccccccCCCCceeEEEEe-CCCceeeeecCCcccccceE-EecCCCCcccccc
Q psy17477 45 QGFLIKRSQNKKRFSTSNNNYKQRWFVL-TTKHLIYYDTDSEIFLSGIR-LSDLPDQIFHDIL 105 (108)
Q Consensus 45 eG~L~Krg~~~k~~~~~~~nwK~RwFVL-t~~~LsYYk~~~ek~~~kG~-I~~l~d~~f~~~~ 105 (108)
.|||+-.+-.. .+.++|||-| |.++-.-|+...+.. .|| ..+..|-.|.++-
T Consensus 230 pGY~iHEAv~W-------S~~~~kW~FlPRr~S~e~Yde~~DE~--~G~N~ii~~de~F~~i~ 283 (352)
T PTZ00486 230 PGYIIHEAVTY-------SNLLRKWYFLPRRVSNEPYDEEKDEY--RGSNYIIICDEDFQNPR 283 (352)
T ss_pred CccEEEEeEee-------ehhcCEEEEeccccCcccccchhhhh--cCCcEEEEecccccceE
Confidence 48888877665 3788999998 556666777665333 344 4445567777764
No 70
>KOG4424|consensus
Probab=50.35 E-value=13 Score=33.39 Aligned_cols=39 Identities=23% Similarity=0.457 Sum_probs=34.1
Q ss_pred ccceeeeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCC
Q psy17477 39 SDDILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDS 84 (108)
Q Consensus 39 ~~~vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ 84 (108)
..++||||.+.|.+... .+..+|+.+|=.+-+-|.+...
T Consensus 269 sreLiKEG~l~Kis~k~-------~~~qeRylfLFNd~~lyc~~r~ 307 (623)
T KOG4424|consen 269 SRELIKEGQLQKISAKN-------GTTQERYLFLFNDILLYCKPRK 307 (623)
T ss_pred HHHHhhccceeeeeccC-------CCcceeEEEEehhHHHhhhhhh
Confidence 67899999999998775 5999999999999999988654
No 71
>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=43.89 E-value=25 Score=24.56 Aligned_cols=26 Identities=15% Similarity=0.535 Sum_probs=18.0
Q ss_pred eeeeeEeecCCccccccCCCCceeEEEEeCC
Q psy17477 44 RQGFLIKRSQNKKRFSTSNNNYKQRWFVLTT 74 (108)
Q Consensus 44 keG~L~Krg~~~k~~~~~~~nwK~RwFVLt~ 74 (108)
++|||..|. ++.++. +|-+.|+....
T Consensus 1 k~GYLy~~~--k~~~~~---~Wvk~y~~~~~ 26 (104)
T cd01249 1 KEGYLYMQE--KSKFGG---SWTKYYCTYSK 26 (104)
T ss_pred CCceEEEEc--CCCCCC---eEEEEEEEEEc
Confidence 589999987 333444 89966666554
No 72
>PF06079 Apyrase: Apyrase; InterPro: IPR009283 This family consists of several eukaryotic apyrase (or adenosine diphosphatase) proteins (3.6.1.5 from EC), and related nucleoside diphosphatases (3.6.1.6 from EC). The salivary apyrases of blood-feeding arthropods are nucleotide hydrolysing enzymes implicated in the inhibition of host platelet aggregation through the hydrolysis of extracellular adenosine diphosphate [].; GO: 0005509 calcium ion binding, 0016462 pyrophosphatase activity; PDB: 2H2N_A 1S18_A 2H2U_A 1S1D_B.
Probab=40.07 E-value=6.6 Score=32.10 Aligned_cols=53 Identities=28% Similarity=0.427 Sum_probs=26.4
Q ss_pred eeeeEeecCCccccccCCCCceeEEEEeC-CCceeeeecCC-cccccceEEecCCCCccccccc
Q psy17477 45 QGFLIKRSQNKKRFSTSNNNYKQRWFVLT-TKHLIYYDTDS-EIFLSGIRLSDLPDQIFHDILV 106 (108)
Q Consensus 45 eG~L~Krg~~~k~~~~~~~nwK~RwFVLt-~~~LsYYk~~~-ek~~~kG~I~~l~d~~f~~~~~ 106 (108)
-|||+-.+... ..-++|||-|- .++-.-|+... |.+ .+-+.+..|..|.+|-|
T Consensus 167 PGY~iHEav~W-------S~~~~~WfFLPRr~S~e~Y~e~~DE~~--G~N~li~a~edF~~i~v 221 (291)
T PF06079_consen 167 PGYMIHEAVVW-------SDIHKKWFFLPRRCSKEPYDETADERR--GCNLLISADEDFSDIKV 221 (291)
T ss_dssp T-EEE-S-EEE-------ETTTTEEEE--SEEESS---HHHHTT---B--EEEEE-TTSSSEEE
T ss_pred CceEEEeeeee-------ccccCEEEEeccccccccccchhhhhc--CccEEEEeccCcceeEE
Confidence 38888777555 36788999984 44444555444 443 23366666778888754
No 73
>KOG0521|consensus
Probab=34.59 E-value=12 Score=34.34 Aligned_cols=41 Identities=24% Similarity=0.528 Sum_probs=32.4
Q ss_pred ccceeeeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCCc
Q psy17477 39 SDDILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSE 85 (108)
Q Consensus 39 ~~~vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~e 85 (108)
......+|++.||.+... ++|++|||-.....+.|+.-...
T Consensus 271 ~~~~~~~~~l~~k~~~~~------~tw~r~~f~~q~~~l~~~~r~~~ 311 (785)
T KOG0521|consen 271 KLGYRMEGYLRKKASNAS------KTWKRRWFSIQDGQLGYQHRGAD 311 (785)
T ss_pred cchhhhhhhhhhhcccch------hhHHhhhhhhhcccccccccccc
Confidence 345566889999888754 69999999999888888886543
No 74
>KOG1117|consensus
Probab=31.68 E-value=64 Score=30.80 Aligned_cols=41 Identities=24% Similarity=0.526 Sum_probs=33.3
Q ss_pred eeeeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCC
Q psy17477 42 ILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDS 84 (108)
Q Consensus 42 vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ 84 (108)
.+++|.|.-|-.+-+.++. +-+..|+|+|+...|.-|+..+
T Consensus 1030 s~k~G~lKirEe~srll~g--~~fqdryfilng~~l~lyke~K 1070 (1186)
T KOG1117|consen 1030 SIKEGILKIREEPSRLLSG--NKFQDRYFILNGGCLFLYKEVK 1070 (1186)
T ss_pred CcccceEEeccCccccccC--CccceEEEEecCcEEEEeehhh
Confidence 5789998877666554455 6788999999999999999776
No 75
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=31.59 E-value=52 Score=27.61 Aligned_cols=28 Identities=21% Similarity=0.422 Sum_probs=21.6
Q ss_pred ccceeeeeeeEeecCCccccccCCCCceeEEEEeCC
Q psy17477 39 SDDILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTT 74 (108)
Q Consensus 39 ~~~vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~ 74 (108)
....+.+|.+.+.+.. ..||+|++++++
T Consensus 370 ~~~~~~~g~~~~~~~~--------~~w~~~~~~~~~ 397 (496)
T PTZ00283 370 GGLTLYEGIVKKQSSD--------LSWKRRYLCIRG 397 (496)
T ss_pred CCceeeeeEEecccCC--------cccceeEEEEee
Confidence 4566788888887655 379999999974
No 76
>PF10574 UPF0552: Uncharacterised protein family UPF0552; InterPro: IPR018889 This family of proteins has no known function.
Probab=28.43 E-value=69 Score=25.41 Aligned_cols=32 Identities=25% Similarity=0.456 Sum_probs=21.8
Q ss_pred ccceeeeeeeEeecCCccccccCCCCceeEEEEeC
Q psy17477 39 SDDILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLT 73 (108)
Q Consensus 39 ~~~vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt 73 (108)
-.-+|.||.|.+.+...- + .+.+=|.||+||.
T Consensus 32 G~GvilEG~l~~~sRH~I-~--D~~~~k~Ry~vl~ 63 (224)
T PF10574_consen 32 GDGVILEGELVDVSRHSI-T--DASGQKERYYVLY 63 (224)
T ss_pred CCeEEEEEEEEeeeEEEE-E--cCCCCceEEEEEE
Confidence 355788999998764321 1 1256799999874
No 77
>PF15408 PH_7: Pleckstrin homology domain
Probab=27.12 E-value=16 Score=25.42 Aligned_cols=33 Identities=18% Similarity=0.523 Sum_probs=24.3
Q ss_pred eeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCCcc
Q psy17477 45 QGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDSEI 86 (108)
Q Consensus 45 eG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ek 86 (108)
||||..--. ..-++|+.+||...+.+|..++..
T Consensus 1 EGYLY~~E~---------~si~rRF~~L~~K~~~~~~~KGG~ 33 (104)
T PF15408_consen 1 EGYLYRDED---------SSIQRRFVMLRSKQFNMYEDKGGQ 33 (104)
T ss_pred CCeEEEecc---------chHHHHHHhhhhceeEEecccCCc
Confidence 577776321 256788888999999999987744
No 78
>PF04714 BCL_N: BCL7, N-terminal conserver region; InterPro: IPR006804 The members of this group of sequences contain a conserved N-terminal domain which is found in the BCL7 family. The function of BCL7 proteins is unknown, though they may be involved in early development. Notably, BCL7B is commonly hemizygously deleted in patients with Williams syndrome [].
Probab=26.51 E-value=43 Score=20.87 Aligned_cols=18 Identities=17% Similarity=0.637 Sum_probs=16.5
Q ss_pred CceeEEEEeCCCceeeee
Q psy17477 64 NYKQRWFVLTTKHLIYYD 81 (108)
Q Consensus 64 nwK~RwFVLt~~~LsYYk 81 (108)
.|.++|+.+...+|.-|+
T Consensus 29 ~wEKKWVtv~dtslriyK 46 (52)
T PF04714_consen 29 KWEKKWVTVGDTSLRIYK 46 (52)
T ss_pred HHhhceEEeccceEEEEE
Confidence 799999999999999887
No 79
>KOG0705|consensus
Probab=26.12 E-value=11 Score=34.10 Aligned_cols=38 Identities=29% Similarity=0.508 Sum_probs=28.4
Q ss_pred eeeeeeeEeecCCccccccCCCCceeEEEEeCC-CceeeeecCC
Q psy17477 42 ILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTT-KHLIYYDTDS 84 (108)
Q Consensus 42 vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~-~~LsYYk~~~ 84 (108)
-||+|+|.||+... -|+.||+.+++|-. .-|.||-.=.
T Consensus 302 PIKQg~LlKrSgk~-----L~keWKKKYVtlcsnG~LtYh~sL~ 340 (749)
T KOG0705|consen 302 PIKQGMLLKRSGKS-----LNKEWKKKYVTLCSNGVLTYHPSLG 340 (749)
T ss_pred chhhhhHHHhcchH-----HHHHHhhhheeeccCcceeecccHH
Confidence 47999999987553 22699999999864 6677876543
No 80
>PF04195 Transposase_28: Putative gypsy type transposon; InterPro: IPR007321 This domain is found in a family of plant gene products and is thought to be related to gypsy type transposons. There is a domain of unknown function, (IPR007228 from INTERPRO), at the C terminus of the proteins. More information about these proteins can be found at Protein of the Month: Transposase [].
Probab=26.05 E-value=30 Score=26.23 Aligned_cols=14 Identities=43% Similarity=0.873 Sum_probs=11.2
Q ss_pred CCCCceeEEEEeCC
Q psy17477 61 SNNNYKQRWFVLTT 74 (108)
Q Consensus 61 ~~~nwK~RwFVLt~ 74 (108)
..++||.|||-|+.
T Consensus 155 s~~~Wk~~WFYl~~ 168 (181)
T PF04195_consen 155 SWKGWKSRWFYLKN 168 (181)
T ss_pred hhhccccceeeecC
Confidence 34699999999874
No 81
>KOG1264|consensus
Probab=23.28 E-value=1e+02 Score=29.52 Aligned_cols=36 Identities=28% Similarity=0.509 Sum_probs=29.6
Q ss_pred eeeeeeeEeecCCccccccCCCCceeEEEEeCCCceeeeecCC
Q psy17477 42 ILRQGFLIKRSQNKKRFSTSNNNYKQRWFVLTTKHLIYYDTDS 84 (108)
Q Consensus 42 vlkeG~L~Krg~~~k~~~~~~~nwK~RwFVLt~~~LsYYk~~~ 84 (108)
.+|+|.|.-+-..- ..|-.-+|||+...|+|...-.
T Consensus 475 svk~GiLy~kd~vd-------heWt~h~fvlt~~kl~ys~e~~ 510 (1267)
T KOG1264|consen 475 SVKQGILYMKDPVD-------HEWTRHYFVLTDAKLSYSDEIE 510 (1267)
T ss_pred hhhcceEEEecCCC-------CceeeeEEEEecceeEeehhcc
Confidence 37899998877555 5899999999999999987543
Done!