Query psy17484
Match_columns 283
No_of_seqs 126 out of 146
Neff 3.5
Searched_HMMs 13730
Date Fri Aug 16 23:39:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17484.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/17484hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1gg2g_ a.137.3.1 (G:) Transdu 61.4 0.87 6.3E-05 31.0 0.2 22 256-277 4-25 (54)
2 d2jn6a1 a.4.1.19 (A:1-89) Unch 54.0 1.4 0.00011 31.1 0.3 22 254-275 61-82 (89)
3 d1k1fa_ a.147.1.1 (A:) Bcr-Abl 48.0 4.7 0.00034 28.6 2.2 22 261-282 28-49 (67)
4 d1tbge_ a.137.3.1 (E:) Transdu 40.1 3.1 0.00023 29.5 0.3 23 255-277 13-35 (68)
5 d1ivsa1 a.2.7.3 (A:797-862) Va 35.3 14 0.001 24.7 3.1 24 259-282 4-27 (66)
6 d1e52a_ a.2.9.1 (A:) C-termina 34.9 17 0.0012 24.4 3.4 38 229-268 3-52 (56)
7 d1nlwa_ a.38.1.1 (A:) Mad prot 27.9 35 0.0026 23.0 4.3 24 254-277 56-79 (79)
8 d1uklc_ a.38.1.1 (C:) SREBP-2 27.5 23 0.0017 23.2 3.1 24 254-277 35-58 (61)
9 d1nkpa_ a.38.1.1 (A:) Myc prot 26.7 39 0.0028 23.3 4.4 26 252-277 59-84 (88)
10 d1am9a_ a.38.1.1 (A:) SREBP-1a 25.6 36 0.0026 23.2 4.0 23 257-279 55-77 (80)
11 d1r8da_ a.6.1.3 (A:) Multidrug 24.8 13 0.00095 26.4 1.4 20 234-253 39-58 (109)
12 d1seta1 a.2.7.1 (A:1-110) Sery 24.5 30 0.0022 24.7 3.5 27 254-280 66-92 (110)
13 d1vqov1 a.2.2.1 (V:1-65) Ribos 23.8 32 0.0023 23.2 3.3 20 254-273 13-32 (65)
14 d1nkpb_ a.38.1.1 (B:) Max prot 23.5 50 0.0036 22.4 4.4 27 251-277 53-79 (83)
15 d7aata_ c.67.1.1 (A:) Aspartat 23.2 30 0.0022 28.8 3.7 28 237-264 39-83 (401)
16 d1lsta_ c.94.1.1 (A:) Lysine-, 23.1 16 0.0011 27.4 1.7 40 238-278 187-230 (238)
17 d2gycw1 a.2.2.1 (W:1-60) Ribos 22.9 20 0.0015 23.8 2.0 19 254-272 11-29 (60)
18 d2e1fa1 a.60.8.1 (A:1142-1235) 22.3 30 0.0022 24.6 3.1 31 244-274 1-32 (94)
19 d3tata_ c.67.1.1 (A:) Aromatic 22.1 25 0.0018 29.3 3.0 28 237-264 37-82 (397)
20 d1yaaa_ c.67.1.1 (A:) Aspartat 22.0 25 0.0018 29.7 3.0 28 237-264 40-85 (412)
21 d1io1a_ e.32.1.1 (A:) Phase 1 21.6 29 0.0021 27.2 3.1 20 254-273 53-72 (395)
22 d1t1ha_ g.44.1.2 (A:) E3 ubiqu 20.7 14 0.001 24.8 0.9 16 254-269 61-76 (78)
23 d1am9a_ a.38.1.1 (A:) SREBP-1a 20.5 41 0.003 22.9 3.4 22 252-273 57-78 (80)
24 d1j8ba_ d.222.1.1 (A:) Hypothe 20.1 31 0.0022 24.4 2.7 22 245-270 3-24 (92)
25 d2fcwa1 a.13.1.1 (A:216-320) a 20.1 33 0.0024 25.8 3.0 20 259-278 23-42 (105)
No 1
>d1gg2g_ a.137.3.1 (G:) Transducin (heterotrimeric G protein), gamma chain {Cow (Bos taurus) [TaxId: 9913]}
Probab=61.38 E-value=0.87 Score=30.97 Aligned_cols=22 Identities=41% Similarity=0.297 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q psy17484 256 GLRQEMERLKKENLSLRDKLSK 277 (283)
Q Consensus 256 aLRqEVa~LRKElgr~rniLsK 277 (283)
.+|.+|..||+|+++-|-.+|+
T Consensus 4 q~rk~VeqLr~e~~~~RikvS~ 25 (54)
T d1gg2g_ 4 QARKLVEQLKMEANIDRIKVSK 25 (54)
T ss_dssp HHHHHHHHHHHHHSSCCCCHHH
T ss_pred HHHHHHHHHHHHhCCchhhHHH
Confidence 5799999999999887777776
No 2
>d2jn6a1 a.4.1.19 (A:1-89) Uncharacterized protein Cgl2762 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=54.01 E-value=1.4 Score=31.12 Aligned_cols=22 Identities=27% Similarity=0.377 Sum_probs=18.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH
Q psy17484 254 NMGLRQEMERLKKENLSLRDKL 275 (283)
Q Consensus 254 NaaLRqEVa~LRKElgr~rniL 275 (283)
+..+++|+++||+||-++|.-.
T Consensus 61 ~~~~~~ei~~L~~En~~Lk~~~ 82 (89)
T d2jn6a1 61 AVSEAEQIRQLKKENALQRART 82 (89)
T ss_dssp HHHTHHHHHHHHHCGGGGGGTT
T ss_pred chhHHHHHHHHHHHHHHHHHHH
Confidence 6778899999999999888643
No 3
>d1k1fa_ a.147.1.1 (A:) Bcr-Abl oncoprotein oligomerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.03 E-value=4.7 Score=28.61 Aligned_cols=22 Identities=5% Similarity=0.184 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHhhhhccc
Q psy17484 261 MERLKKENLSLRDKLSKFTDLL 282 (283)
Q Consensus 261 Va~LRKElgr~rniLsKYE~~~ 282 (283)
|.++-+||.|||.-|.+.|.+|
T Consensus 28 V~diE~eLerCk~~irrLeqel 49 (67)
T d1k1fa_ 28 VGDIEQELERAKASIRRLEQEV 49 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999888765
No 4
>d1tbge_ a.137.3.1 (E:) Transducin (heterotrimeric G protein), gamma chain {Cow (Bos taurus) [TaxId: 9913]}
Probab=40.11 E-value=3.1 Score=29.48 Aligned_cols=23 Identities=39% Similarity=0.340 Sum_probs=17.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhh
Q psy17484 255 MGLRQEMERLKKENLSLRDKLSK 277 (283)
Q Consensus 255 aaLRqEVa~LRKElgr~rniLsK 277 (283)
..||.||..||.|++.-|-.+|+
T Consensus 13 ~~lk~~VeQLr~Ea~i~R~~VS~ 35 (68)
T d1tbge_ 13 DKLKMEVDQLKKEVTLERMLVSK 35 (68)
T ss_dssp HHHHHHHHHHHHHHTCCCCCHHH
T ss_pred HHHHHHHHHHHHHhcCchhhHHH
Confidence 36899999999998766655554
No 5
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=35.26 E-value=14 Score=24.66 Aligned_cols=24 Identities=17% Similarity=-0.011 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccc
Q psy17484 259 QEMERLKKENLSLRDKLSKFTDLL 282 (283)
Q Consensus 259 qEVa~LRKElgr~rniLsKYE~~~ 282 (283)
.|++.|.|++.++.+-|.+++.-|
T Consensus 4 ~E~~RL~K~l~kl~~~i~~~~~kL 27 (66)
T d1ivsa1 4 EWRRRQEKRLKELLALAERSQRKL 27 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566666666666666666665544
No 6
>d1e52a_ a.2.9.1 (A:) C-terminal UvrC-binding domain of UvrB {Escherichia coli [TaxId: 562]}
Probab=34.90 E-value=17 Score=24.44 Aligned_cols=38 Identities=16% Similarity=0.190 Sum_probs=25.7
Q ss_pred CCCCCCCCCccccCCcchhhhhhhh------------hhHHHHHHHHHHHHH
Q psy17484 229 FDPRSRTFSDEELKPQPMVKKSRKQ------------NMGLRQEMERLKKEN 268 (283)
Q Consensus 229 FDPRkhkFSEEELKPQPMIKKARKv------------NaaLRqEVa~LRKEl 268 (283)
.|++.+.+|.+|| +=+|+.-+|. =|.+|.++..||+.|
T Consensus 3 ~d~~~~~ls~~el--~k~i~~Le~~M~~aa~~l~FE~AA~~RD~I~~l~~~l 52 (56)
T d1e52a_ 3 PDNVPMDMSPKAL--QQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELF 52 (56)
T ss_dssp CTTSSCCSCCSHH--HHHHHHHHHHHHHHHHTTCHHHHTTHHHHHHHHHHHH
T ss_pred CCcccccCCHHHH--HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Confidence 5778888888888 4567666655 455666666666654
No 7
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.92 E-value=35 Score=23.03 Aligned_cols=24 Identities=21% Similarity=0.434 Sum_probs=20.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhh
Q psy17484 254 NMGLRQEMERLKKENLSLRDKLSK 277 (283)
Q Consensus 254 NaaLRqEVa~LRKElgr~rniLsK 277 (283)
+..|.+|+..|++++..|+..|.+
T Consensus 56 ~~~l~~~~~~L~~~~~~L~~~l~~ 79 (79)
T d1nlwa_ 56 DRKAVHQIDQLQREQRHLKRQLEK 79 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 888888899999999888887753
No 8
>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.53 E-value=23 Score=23.24 Aligned_cols=24 Identities=29% Similarity=0.267 Sum_probs=17.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhh
Q psy17484 254 NMGLRQEMERLKKENLSLRDKLSK 277 (283)
Q Consensus 254 NaaLRqEVa~LRKElgr~rniLsK 277 (283)
=..|+++|.+|..|+..++..+.+
T Consensus 35 I~~Lq~~~~~L~~e~~~L~~~~~~ 58 (61)
T d1uklc_ 35 IKYLQQVNHKLRQENMVLKLANQK 58 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345777788888887777776654
No 9
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.72 E-value=39 Score=23.28 Aligned_cols=26 Identities=27% Similarity=0.360 Sum_probs=19.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhh
Q psy17484 252 KQNMGLRQEMERLKKENLSLRDKLSK 277 (283)
Q Consensus 252 KvNaaLRqEVa~LRKElgr~rniLsK 277 (283)
+.+..|.+|+..|++++..++.-|+.
T Consensus 59 ~~~~~l~~~~~~l~~~~~~L~~~l~~ 84 (88)
T d1nkpa_ 59 AEEQKLISEEDLLRKRREQLKHKLEQ 84 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33888888888888888888777654
No 10
>d1am9a_ a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.62 E-value=36 Score=23.21 Aligned_cols=23 Identities=43% Similarity=0.606 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhh
Q psy17484 257 LRQEMERLKKENLSLRDKLSKFT 279 (283)
Q Consensus 257 LRqEVa~LRKElgr~rniLsKYE 279 (283)
|.+++..|++|+..++..+..++
T Consensus 55 L~~~~~~L~~e~~~lk~~~~~~~ 77 (80)
T d1am9a_ 55 LQHSNQKLKQENLSLRTAVHKSK 77 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhH
Confidence 44444445555555554444443
No 11
>d1r8da_ a.6.1.3 (A:) Multidrug transporter activator MtaN {Bacillus subtilis [TaxId: 1423]}
Probab=24.78 E-value=13 Score=26.42 Aligned_cols=20 Identities=20% Similarity=0.277 Sum_probs=15.2
Q ss_pred CCCCccccCCcchhhhhhhh
Q psy17484 234 RTFSDEELKPQPMVKKSRKQ 253 (283)
Q Consensus 234 hkFSEEELKPQPMIKKARKv 253 (283)
|-|+++++-=--+|+..|+.
T Consensus 39 R~Y~~~~~~~l~~I~~lr~~ 58 (109)
T d1r8da_ 39 RLYSDADLERLQQILFFKEI 58 (109)
T ss_dssp EEBCHHHHHHHHHHHHHHHT
T ss_pred ccccHHHHHHHHHHHHHHHc
Confidence 44688888777888888776
No 12
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=24.53 E-value=30 Score=24.71 Aligned_cols=27 Identities=19% Similarity=0.142 Sum_probs=17.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy17484 254 NMGLRQEMERLKKENLSLRDKLSKFTD 280 (283)
Q Consensus 254 NaaLRqEVa~LRKElgr~rniLsKYE~ 280 (283)
..+|.+|+..|++++..+...+...+.
T Consensus 66 ~~~l~~~~k~lk~~i~~le~~~~~~~~ 92 (110)
T d1seta1 66 KEALIARGKALGEEAKRLEEALREKEA 92 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777777777777766666655443
No 13
>d1vqov1 a.2.2.1 (V:1-65) Ribosomal protein L29 (L29p) {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=23.81 E-value=32 Score=23.19 Aligned_cols=20 Identities=30% Similarity=0.341 Sum_probs=16.1
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q psy17484 254 NMGLRQEMERLKKENLSLRD 273 (283)
Q Consensus 254 NaaLRqEVa~LRKElgr~rn 273 (283)
..-|..++.+||+|+-.+|.
T Consensus 13 ~~eL~~~l~elk~El~~LR~ 32 (65)
T d1vqov1 13 PAEREAELDDLKTELLNARA 32 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 56788888888888888873
No 14
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.54 E-value=50 Score=22.42 Aligned_cols=27 Identities=26% Similarity=0.498 Sum_probs=20.3
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHhh
Q psy17484 251 RKQNMGLRQEMERLKKENLSLRDKLSK 277 (283)
Q Consensus 251 RKvNaaLRqEVa~LRKElgr~rniLsK 277 (283)
.+.+..|.+|+..|++++..++..|+.
T Consensus 53 ~~~~~~l~~~~~~l~~~~~~L~~~l~~ 79 (83)
T d1nkpb_ 53 RRKNHTHQQDIDDLKRQNALLEQQVRA 79 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333788888888888888888777654
No 15
>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}
Probab=23.17 E-value=30 Score=28.80 Aligned_cols=28 Identities=21% Similarity=0.277 Sum_probs=21.6
Q ss_pred CccccCCc--chhhhhhhh---------------hhHHHHHHHHH
Q psy17484 237 SDEELKPQ--PMVKKSRKQ---------------NMGLRQEMERL 264 (283)
Q Consensus 237 SEEELKPQ--PMIKKARKv---------------NaaLRqEVa~L 264 (283)
-+++.+|+ |.||||... +..|||.+++.
T Consensus 39 ~d~~~~~~~~~~V~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~ 83 (401)
T d7aata_ 39 RDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAEL 83 (401)
T ss_dssp CCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHH
Confidence 36777877 568888554 78899999984
No 16
>d1lsta_ c.94.1.1 (A:) Lysine-,arginine-,ornithine-binding (LAO) protein {Salmonella typhimurium [TaxId: 90371]}
Probab=23.07 E-value=16 Score=27.36 Aligned_cols=40 Identities=15% Similarity=0.205 Sum_probs=22.6
Q ss_pred ccccCCcchhhhhhhhhhHHHHHH----HHHHHHHHHHHHHHhhh
Q psy17484 238 DEELKPQPMVKKSRKQNMGLRQEM----ERLKKENLSLRDKLSKF 278 (283)
Q Consensus 238 EEELKPQPMIKKARKvNaaLRqEV----a~LRKElgr~rniLsKY 278 (283)
...+.+.++-=-.+|-|..|++.| .+|| +-|+++.|+.||
T Consensus 187 ~~~~~~~~~~~a~~k~~~~l~~~in~~l~~~~-~~G~~~~I~~ky 230 (238)
T d1lsta_ 187 DKKYFGDGTGVGLRKDDTELKAAFDKALTELR-QDGTYDKMAKKY 230 (238)
T ss_dssp CHHHHCSSBCCEECTTCHHHHHHHHHHHHHHH-HTTHHHHHHHTT
T ss_pred ccccccccEEEEEeCCCHHHHHHHHHHHHHHH-HCcHHHHHHHHH
Confidence 334444443222233355555444 4554 578999999998
No 17
>d2gycw1 a.2.2.1 (W:1-60) Ribosomal protein L29 (L29p) {Escherichia coli [TaxId: 562]}
Probab=22.91 E-value=20 Score=23.84 Aligned_cols=19 Identities=32% Similarity=0.417 Sum_probs=11.7
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q psy17484 254 NMGLRQEMERLKKENLSLR 272 (283)
Q Consensus 254 NaaLRqEVa~LRKElgr~r 272 (283)
..-|..++.+||+|+-.+|
T Consensus 11 ~~eL~~~l~~l~~el~~lR 29 (60)
T d2gycw1 11 VEELNTELLNLLREQFNLR 29 (60)
T ss_dssp HHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4556666667766665443
No 18
>d2e1fa1 a.60.8.1 (A:1142-1235) Werner syndrome ATP-dependent helicase, WRN {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.26 E-value=30 Score=24.58 Aligned_cols=31 Identities=13% Similarity=0.285 Sum_probs=21.7
Q ss_pred cchhhhhhhh-hhHHHHHHHHHHHHHHHHHHH
Q psy17484 244 QPMVKKSRKQ-NMGLRQEMERLKKENLSLRDK 274 (283)
Q Consensus 244 QPMIKKARKv-NaaLRqEVa~LRKElgr~rni 274 (283)
||.|..-..- ..+|-+++.++|+++.+-++|
T Consensus 1 ~p~~~~~~~~~~~~L~~~L~~~R~~~A~~~~i 32 (94)
T d2e1fa1 1 QPVISAQEQETQIVLYGKLVEARQKHANKMDV 32 (94)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCCccccccHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5665433322 778888999999988877765
No 19
>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}
Probab=22.11 E-value=25 Score=29.27 Aligned_cols=28 Identities=14% Similarity=0.092 Sum_probs=22.1
Q ss_pred CccccCCc--chhhhhhhh----------------hhHHHHHHHHH
Q psy17484 237 SDEELKPQ--PMVKKSRKQ----------------NMGLRQEMERL 264 (283)
Q Consensus 237 SEEELKPQ--PMIKKARKv----------------NaaLRqEVa~L 264 (283)
.+++.++. |-||+|.+. +..||+.||++
T Consensus 37 ~d~~g~~p~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lR~aia~~ 82 (397)
T d3tata_ 37 YNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPL 82 (397)
T ss_dssp CCTTSSCCCCHHHHHHHHHHTTSCCSSBCCCCTTCCHHHHHHHHHH
T ss_pred cCCCCCCCCcHHHHHHHHHHHhCcccCCCCCCcccCHHHHHHHHHH
Confidence 46777764 679999775 78899999985
No 20
>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}
Probab=22.01 E-value=25 Score=29.68 Aligned_cols=28 Identities=29% Similarity=0.382 Sum_probs=21.4
Q ss_pred CccccCCc--chhhhhhhh----------------hhHHHHHHHHH
Q psy17484 237 SDEELKPQ--PMVKKSRKQ----------------NMGLRQEMERL 264 (283)
Q Consensus 237 SEEELKPQ--PMIKKARKv----------------NaaLRqEVa~L 264 (283)
-+++-+|. |.+|+|.+. +..||+.|+++
T Consensus 40 ~d~~g~~~~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~ 85 (412)
T d1yaaa_ 40 RDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKI 85 (412)
T ss_dssp BCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHH
T ss_pred cCCCCCCCCcHHHHHHHHHHHhCcccCCCCCCCCCCHHHHHHHHHH
Confidence 35566665 679999766 78999999885
No 21
>d1io1a_ e.32.1.1 (A:) Phase 1 flagellin {Salmonella typhimurium [TaxId: 90371]}
Probab=21.63 E-value=29 Score=27.17 Aligned_cols=20 Identities=10% Similarity=0.016 Sum_probs=17.2
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q psy17484 254 NMGLRQEMERLKKENLSLRD 273 (283)
Q Consensus 254 NaaLRqEVa~LRKElgr~rn 273 (283)
=.+|-.||.+|++||.|+-+
T Consensus 53 r~ai~~E~~~l~~ei~~ia~ 72 (395)
T d1io1a_ 53 LDSIQAEITQRLNEIDRVSG 72 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999754
No 22
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=20.70 E-value=14 Score=24.78 Aligned_cols=16 Identities=19% Similarity=0.044 Sum_probs=13.4
Q ss_pred hhHHHHHHHHHHHHHH
Q psy17484 254 NMGLRQEMERLKKENL 269 (283)
Q Consensus 254 NaaLRqEVa~LRKElg 269 (283)
|.+||+.|.+.+++.|
T Consensus 61 N~~L~~~I~~~~~~~~ 76 (78)
T d1t1ha_ 61 NYVLKSLIALWCESNG 76 (78)
T ss_dssp CTTTHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHHHhC
Confidence 8899999999887654
No 23
>d1am9a_ a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.51 E-value=41 Score=22.91 Aligned_cols=22 Identities=23% Similarity=0.217 Sum_probs=18.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHH
Q psy17484 252 KQNMGLRQEMERLKKENLSLRD 273 (283)
Q Consensus 252 KvNaaLRqEVa~LRKElgr~rn 273 (283)
+.|..|++|++.|+.++...+.
T Consensus 57 ~~~~~L~~e~~~lk~~~~~~~~ 78 (80)
T d1am9a_ 57 HSNQKLKQENLSLRTAVHKSKS 78 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHh
Confidence 3399999999999999988664
No 24
>d1j8ba_ d.222.1.1 (A:) Hypothetical protein HI0442 {Haemophilus influenzae [TaxId: 727]}
Probab=20.14 E-value=31 Score=24.42 Aligned_cols=22 Identities=14% Similarity=0.498 Sum_probs=17.7
Q ss_pred chhhhhhhhhhHHHHHHHHHHHHHHH
Q psy17484 245 PMVKKSRKQNMGLRQEMERLKKENLS 270 (283)
Q Consensus 245 PMIKKARKvNaaLRqEVa~LRKElgr 270 (283)
=|+|+|++ +++.+.++++||..
T Consensus 3 ~mmkqaq~----mq~~m~~~q~eL~~ 24 (92)
T d1j8ba_ 3 GLMKQAQQ----MQEKMQKMQEEIAQ 24 (92)
T ss_dssp CHHHHHHH----HHHHHHHHHHHHTT
T ss_pred HHHHHHHH----HHHHHHHHHHHHhC
Confidence 38999998 47888999998753
No 25
>d2fcwa1 a.13.1.1 (A:216-320) alpha-2-Macroglobulin receptor associated protein (RAP) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.06 E-value=33 Score=25.83 Aligned_cols=20 Identities=25% Similarity=0.443 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHHhhh
Q psy17484 259 QEMERLKKENLSLRDKLSKF 278 (283)
Q Consensus 259 qEVa~LRKElgr~rniLsKY 278 (283)
+|++-||.||.+|-+.|.|.
T Consensus 23 ~EL~SlkeEL~HfE~rl~K~ 42 (105)
T d2fcwa1 23 KELEAFREELKHFEAKIEKH 42 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999998874
Done!