Your job contains 1 sequence.
>psy17484
MTKRERSPSPSEPMSPLTISPPSPADSRKTNCKESSDKSKEDSELWSTVEAQAAFLGPNI
WDKTLPYDSDLKVMLSPLVLSTGKTNCKESSDKSKEDSELWSTVEAQAAFLGPNIWDKTL
PYDSDLKYVDLDEFLSDNGIPVDGNTSQTSTGGAPTPAANLTGGHTTTTLQNVTSTISGR
LSPCGSSQASVMTKRERSPSPSEPMSPLTISPPSPADSTLSFTSSTRDFDPRSRTFSDEE
LKPQPMVKKSRKQNMGLRQEMERLKKENLSLRDKLSKFTDLLS
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17484
(283 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0016694 - symbol:Pdp1 "PAR-domain protein 1" speci... 336 1.4e-36 2
UNIPROTKB|F1NBU3 - symbol:HLF "Uncharacterized protein" s... 248 5.6e-25 2
MGI|MGI:96108 - symbol:Hlf "hepatic leukemia factor" spec... 240 4.9e-24 2
UNIPROTKB|Q16534 - symbol:HLF "Hepatic leukemia factor" s... 238 7.9e-24 2
RGD|1561379 - symbol:Hlf "hepatic leukemia factor" specie... 238 7.9e-24 2
UNIPROTKB|Q64709 - symbol:Hlf "Hepatic leukemia factor" s... 238 7.9e-24 2
UNIPROTKB|J9P0W7 - symbol:HLF "Uncharacterized protein" s... 237 1.0e-23 2
UNIPROTKB|E1BFR1 - symbol:HLF "Uncharacterized protein" s... 234 2.1e-23 2
ZFIN|ZDB-GENE-061013-159 - symbol:hlfa "hepatic leukemia ... 236 5.4e-23 2
UNIPROTKB|I3L4R4 - symbol:HLF "Hepatic leukemia factor" s... 240 2.7e-20 1
UNIPROTKB|E2RRC5 - symbol:DBP "Uncharacterized protein" s... 198 2.8e-18 2
MGI|MGI:94866 - symbol:Dbp "D site albumin promoter bindi... 197 3.7e-18 2
RGD|2491 - symbol:Dbp "D site of albumin promoter (albumi... 197 3.7e-18 2
UNIPROTKB|F1RIP8 - symbol:LOC100738095 "Uncharacterized p... 194 9.1e-18 2
UNIPROTKB|Q32PF6 - symbol:DBP "D site-binding protein" sp... 193 1.2e-17 2
UNIPROTKB|Q10586 - symbol:DBP "D site-binding protein" sp... 192 1.6e-17 2
ZFIN|ZDB-GENE-110420-3 - symbol:hlfb "hepatic leukemia fa... 148 4.2e-17 3
UNIPROTKB|E2RCX8 - symbol:TEF "Uncharacterized protein" s... 208 6.7e-17 1
UNIPROTKB|E1B704 - symbol:LOC616076 "Uncharacterized prot... 206 1.1e-16 1
UNIPROTKB|E2RCY0 - symbol:TEF "Uncharacterized protein" s... 208 1.3e-16 1
MGI|MGI:98663 - symbol:Tef "thyrotroph embryonic factor" ... 205 1.4e-16 1
UNIPROTKB|Q10587 - symbol:TEF "Thyrotroph embryonic facto... 204 1.8e-16 1
RGD|3841 - symbol:Tef "thyrotrophic embryonic factor" spe... 204 1.8e-16 1
UNIPROTKB|P41224 - symbol:Tef "Thyrotroph embryonic facto... 204 1.8e-16 1
ZFIN|ZDB-GENE-060503-802 - symbol:dbpa "D site of albumin... 126 2.7e-16 3
UNIPROTKB|F1NLV2 - symbol:TEF "Transcription factor VBP" ... 199 6.0e-16 1
UNIPROTKB|Q92172 - symbol:TEF "Transcription factor VBP" ... 199 8.9e-16 1
ZFIN|ZDB-GENE-050522-224 - symbol:tefb "thyrotroph embryo... 119 9.9e-14 3
ZFIN|ZDB-GENE-990415-264 - symbol:tefa "thyrotroph embryo... 156 2.0e-13 2
UNIPROTKB|A8K1X8 - symbol:HLF "Hepatic leukemia factor" s... 147 2.1e-12 2
ZFIN|ZDB-GENE-100922-6 - symbol:dbpb "D site of albumin p... 128 3.1e-10 3
UNIPROTKB|Q6R2I2 - symbol:Dbp "D-binding protein 3" speci... 123 2.8e-06 1
>FB|FBgn0016694 [details] [associations]
symbol:Pdp1 "PAR-domain protein 1" species:7227 "Drosophila
melanogaster" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA;TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IPI] [GO:0006351 "transcription, DNA-dependent"
evidence=TAS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0007623 "circadian rhythm" evidence=IGI;IMP;IDA;TAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0040007 "growth" evidence=IMP] [GO:0007584 "response to
nutrient" evidence=IMP] [GO:0042023 "DNA endoreduplication"
evidence=IMP] [GO:0007067 "mitosis" evidence=IMP]
InterPro:IPR004827 Pfam:PF07716 PROSITE:PS50217 SMART:SM00338
GO:GO:0005634 GO:GO:0040007 GO:GO:0042803 EMBL:AE014296
GO:GO:0007067 GO:GO:0003677 GO:GO:0007623 GO:GO:0043565
GO:GO:0007584 GO:GO:0001077 GO:GO:0042023
GeneTree:ENSGT00440000039070 KO:K09057 CTD:54704 ChiTaRS:PDP1
HSSP:P05554 UniGene:Dm.1594 GeneID:45588 KEGG:dme:Dmel_CG17888
FlyBase:FBgn0016694 GenomeRNAi:45588 NextBio:838246 EMBL:AY070526
RefSeq:NP_729301.1 SMR:Q8SZT1 STRING:Q8SZT1
EnsemblMetazoa:FBtr0076780 UCSC:CG17888-RD InParanoid:Q8SZT1
OMA:QHHAAQL Uniprot:Q8SZT1
Length = 647
Score = 336 (123.3 bits), Expect = 1.4e-36, Sum P(2) = 1.4e-36
Identities = 79/157 (50%), Positives = 98/157 (62%)
Query: 100 LWSTVEAQAAFLGPNIWDKTLPYDSDLK---YVDLDEFLSDNGIPVDGNTSQTSTGGAPT 156
+W+ VEAQ AFLGPN+WDKTLPYD+DLK Y DLDEFLS+N IP DG
Sbjct: 434 IWN-VEAQTAFLGPNLWDKTLPYDADLKVTQYADLDEFLSENNIP-DG-----------L 480
Query: 157 PAANLTGGHTTTTLQNVTSTISGRLSPCGSSQASVMTKXXXXXXXXXXXXXLTISPPSPA 216
P +L GH++ L + + ++ G + + TK T++PPSPA
Sbjct: 481 PGTHL--GHSSG-LGHRSDSL-GHAAGLSLGLGHITTKRERSPSPSDCISPDTLNPPSPA 536
Query: 217 DSTLSFTSSTRDFDPRSRTFSDEELKPQPMVKKSRKQ 253
+ST SF SS RDFDPR+R FSDEELKPQPM+KKSRKQ
Sbjct: 537 ESTFSFASSGRDFDPRTRAFSDEELKPQPMIKKSRKQ 573
Score = 129 (50.5 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 23/29 (79%), Positives = 27/29 (93%)
Query: 45 LWSTVEAQAAFLGPNIWDKTLPYDSDLKV 73
+W+ VEAQ AFLGPN+WDKTLPYD+DLKV
Sbjct: 434 IWN-VEAQTAFLGPNLWDKTLPYDADLKV 461
Score = 88 (36.0 bits), Expect = 1.4e-36, Sum P(2) = 1.4e-36
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 252 KQNMGLRQEMERLKKENLSLRDKLSKFTDL 281
K+N L QE+E+LK+EN+ LR +LSKF D+
Sbjct: 618 KENATLHQEVEQLKQENMDLRARLSKFQDV 647
>UNIPROTKB|F1NBU3 [details] [associations]
symbol:HLF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR004827 Pfam:PF07716
PROSITE:PS50217 SMART:SM00338 GO:GO:0043565 GO:GO:0003700
GeneTree:ENSGT00440000039070 OMA:PTYGVLK EMBL:AADN02029998
IPI:IPI00599242 Ensembl:ENSGALT00000004832 Uniprot:F1NBU3
Length = 295
Score = 248 (92.4 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
Identities = 65/164 (39%), Positives = 86/164 (52%)
Query: 102 STVEAQAAFLGPNIWDKTLPYDSD---LKYVDLDEFLSDNGIPVDGNTS---------QT 149
ST Q+AFLGP +WDKTLPYD D L+Y+DL+EFLS+NGIP N Q
Sbjct: 56 STTVPQSAFLGPTLWDKTLPYDGDTFQLEYMDLEEFLSENGIPPSPNQHEHSPHQPGLQQ 115
Query: 150 STGGAPTPAANLTGGHTTTTLQNVTSTISGRLSPCGSSQASVMTKXXXXXXXXXXXXXLT 209
+T +P+ +L+ +T+ + S + SP Q + T +
Sbjct: 116 ATSASPS-VMDLSSRASTSVHPGMVSQ-NCMQSPVRPGQI-LPTNRNTPSPIDPETIQVP 172
Query: 210 IS-PPSPADSTLSFTSSTRDFDPRSRTFSDEELKPQPMVKKSRK 252
+ P PAD LS FDPR R FS+EELKPQPM+KK+RK
Sbjct: 173 VGYEPDPADLALSSIPGQEMFDPRKRKFSEEELKPQPMIKKARK 216
Score = 98 (39.6 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 17/24 (70%), Positives = 19/24 (79%)
Query: 47 STVEAQAAFLGPNIWDKTLPYDSD 70
ST Q+AFLGP +WDKTLPYD D
Sbjct: 56 STTVPQSAFLGPTLWDKTLPYDGD 79
Score = 51 (23.0 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 252 KQNMGLRQEMERLKKENLSLRDKLSKF 278
K+N LRQE+ L+KE ++ L+K+
Sbjct: 262 KENSALRQEVADLRKELGKCKNVLAKY 288
Score = 50 (22.7 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 234 RTFSDEELKPQPMVKKSRKQNMGLRQEME--RLKKENLSLR 272
+ F ++LK + RK NM ++ + RLK+ +++R
Sbjct: 216 KVFIPDDLKDDKYWARRRKNNMAAKRSRDARRLKENQIAIR 256
>MGI|MGI:96108 [details] [associations]
symbol:Hlf "hepatic leukemia factor" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035914 "skeletal muscle cell differentiation" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] InterPro:IPR004827
Pfam:PF07716 PROSITE:PS00036 PROSITE:PS50217 SMART:SM00338
MGI:MGI:96108 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0048511 GO:GO:0035914
GeneTree:ENSGT00440000039070 HOGENOM:HOG000234383
HOVERGEN:HBG004983 CTD:3131 eggNOG:NOG329624 KO:K09057 OMA:PTYGVLK
OrthoDB:EOG4QNMWZ EMBL:AK054062 EMBL:BC057693 EMBL:BC058705
IPI:IPI00226138 RefSeq:NP_766151.1 UniGene:Mm.158903
ProteinModelPortal:Q8BW74 SMR:Q8BW74 IntAct:Q8BW74 STRING:Q8BW74
PhosphoSite:Q8BW74 PRIDE:Q8BW74 DNASU:217082
Ensembl:ENSMUST00000004051 GeneID:217082 KEGG:mmu:217082
InParanoid:Q8BW74 ChiTaRS:HLF NextBio:375553 Bgee:Q8BW74
CleanEx:MM_HLF Genevestigator:Q8BW74 GermOnline:ENSMUSG00000003949
Uniprot:Q8BW74
Length = 295
Score = 240 (89.5 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 61/160 (38%), Positives = 82/160 (51%)
Query: 107 QAAFLGPNIWDKTLPYDSD---LKYVDLDEFLSDNGIPVDGNTSQTSTGGAPTPAANLTG 163
Q+AFLGP +WDKTLPYD D L+Y+DL+EFLS+NGIP S + +P P
Sbjct: 61 QSAFLGPTLWDKTLPYDGDTFQLEYMDLEEFLSENGIP----PSPSQHDHSPHPPGLQPA 116
Query: 164 GHTTTTLQNVTSTISGRLSP------CGSS--QASVMTKXXXXXXXXXXXXXLTIS---P 212
T ++ +++S + L P C S + + + +
Sbjct: 117 SSTAPSVMDLSSRATAPLHPGIPSPNCMQSPIRPGQLLPANRNTPSPIDPDTIQVPVGYE 176
Query: 213 PSPADSTLSFTSSTRDFDPRSRTFSDEELKPQPMVKKSRK 252
P PAD LS FDPR R FS+EELKPQPM+KK+RK
Sbjct: 177 PDPADLALSSIPGQEMFDPRKRKFSEEELKPQPMIKKARK 216
Score = 50 (22.7 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 252 KQNMGLRQEMERLKKENLSLRDKLSKF 278
K+N LRQE+ L+KE ++ L+K+
Sbjct: 262 KENSALRQEVADLRKELGKCKNILAKY 288
>UNIPROTKB|Q16534 [details] [associations]
symbol:HLF "Hepatic leukemia factor" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003690 "double-stranded
DNA binding" evidence=TAS] [GO:0003677 "DNA binding" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007275 "multicellular organismal development"
evidence=TAS] InterPro:IPR004827 Pfam:PF07716 PROSITE:PS00036
PROSITE:PS50217 SMART:SM00338 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0048511 Orphanet:99860
GO:GO:0006366 GO:GO:0003690 HOGENOM:HOG000234383 HOVERGEN:HBG004983
EMBL:M95585 EMBL:M95586 EMBL:X68985 EMBL:BC036093 IPI:IPI00002850
PIR:A44064 RefSeq:NP_002117.1 UniGene:Hs.196952
ProteinModelPortal:Q16534 SMR:Q16534 IntAct:Q16534 STRING:Q16534
PhosphoSite:Q16534 DMDM:6919907 PaxDb:Q16534 PRIDE:Q16534
DNASU:3131 Ensembl:ENST00000226067 GeneID:3131 KEGG:hsa:3131
UCSC:uc002iug.1 CTD:3131 GeneCards:GC17P053342 HGNC:HGNC:4977
MIM:142385 neXtProt:NX_Q16534 PharmGKB:PA29311 eggNOG:NOG329624
InParanoid:Q16534 KO:K09057 OMA:PTYGVLK OrthoDB:EOG4QNMWZ
PhylomeDB:Q16534 GenomeRNAi:3131 NextBio:12421 ArrayExpress:Q16534
Bgee:Q16534 CleanEx:HS_HLF Genevestigator:Q16534
GermOnline:ENSG00000108924 Uniprot:Q16534
Length = 295
Score = 238 (88.8 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 61/160 (38%), Positives = 81/160 (50%)
Query: 107 QAAFLGPNIWDKTLPYDSD---LKYVDLDEFLSDNGIPVDGNTSQTSTGGAPTPAANLTG 163
Q+AFLGP +WDKTLPYD D L+Y+DL+EFLS+NGIP S + +P P
Sbjct: 61 QSAFLGPTLWDKTLPYDGDTFQLEYMDLEEFLSENGIP----PSPSQHDHSPHPPGLQPA 116
Query: 164 GHTTTTLQNVTSTISGRLSP------CGSS--QASVMTKXXXXXXXXXXXXXLTIS---P 212
++ +++S S L P C S + + + +
Sbjct: 117 SSAAPSVMDLSSRASAPLHPGIPSPNCMQSPIRPGQLLPANRNTPSPIDPDTIQVPVGYE 176
Query: 213 PSPADSTLSFTSSTRDFDPRSRTFSDEELKPQPMVKKSRK 252
P PAD LS FDPR R FS+EELKPQPM+KK+RK
Sbjct: 177 PDPADLALSSIPGQEMFDPRKRKFSEEELKPQPMIKKARK 216
Score = 50 (22.7 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 252 KQNMGLRQEMERLKKENLSLRDKLSKF 278
K+N LRQE+ L+KE ++ L+K+
Sbjct: 262 KENSALRQEVADLRKELGKCKNILAKY 288
>RGD|1561379 [details] [associations]
symbol:Hlf "hepatic leukemia factor" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
InterPro:IPR004827 Pfam:PF07716 PROSITE:PS00036 PROSITE:PS50217
SMART:SM00338 RGD:1561379 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0048511 HOGENOM:HOG000234383 HOVERGEN:HBG004983
eggNOG:NOG329624 OrthoDB:EOG4QNMWZ EMBL:S79820 IPI:IPI00215260
IPI:IPI00231342 IPI:IPI00231343 IPI:IPI00760121 PIR:S58525
ProteinModelPortal:Q64709 PhosphoSite:Q64709 InParanoid:Q64709
ArrayExpress:Q64709 Genevestigator:Q64709
GermOnline:ENSRNOG00000002456 Uniprot:Q64709
Length = 295
Score = 238 (88.8 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 63/161 (39%), Positives = 81/161 (50%)
Query: 107 QAAFLGPNIWDKTLPYDSD---LKYVDLDEFLSDNGIPVDGNTSQTSTGGAPTPAANLTG 163
Q+AFLGP +WDKTLPYD D L+Y+DL+EFLS+NGIP S + +P P
Sbjct: 61 QSAFLGPTLWDKTLPYDGDTFQLEYMDLEEFLSENGIP----PSPSQHDHSPHPPGLQPA 116
Query: 164 GHTTTTLQNVTSTISGRLSPCGSSQASVMTKXXXXXXXXXXXXXLT--ISP--------- 212
T ++ +++S + L P G + M I P
Sbjct: 117 SSTAPSVMDLSSRATAPLHP-GIPSPNCMQNPIRPGQLLPANRNTPSPIDPDTIQVPVGY 175
Query: 213 -PSPADSTLSFTSSTRDFDPRSRTFSDEELKPQPMVKKSRK 252
P PAD LS FDPR R FS+EELKPQPM+KK+RK
Sbjct: 176 EPDPADLALSSIPGPEMFDPRKRKFSEEELKPQPMIKKARK 216
Score = 50 (22.7 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 252 KQNMGLRQEMERLKKENLSLRDKLSKF 278
K+N LRQE+ L+KE ++ L+K+
Sbjct: 262 KENSALRQEVADLRKELGKCKNILAKY 288
>UNIPROTKB|Q64709 [details] [associations]
symbol:Hlf "Hepatic leukemia factor" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR004827
Pfam:PF07716 PROSITE:PS00036 PROSITE:PS50217 SMART:SM00338
RGD:1561379 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0048511 HOGENOM:HOG000234383 HOVERGEN:HBG004983
eggNOG:NOG329624 OrthoDB:EOG4QNMWZ EMBL:S79820 IPI:IPI00215260
IPI:IPI00231342 IPI:IPI00231343 IPI:IPI00760121 PIR:S58525
ProteinModelPortal:Q64709 PhosphoSite:Q64709 InParanoid:Q64709
ArrayExpress:Q64709 Genevestigator:Q64709
GermOnline:ENSRNOG00000002456 Uniprot:Q64709
Length = 295
Score = 238 (88.8 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 63/161 (39%), Positives = 81/161 (50%)
Query: 107 QAAFLGPNIWDKTLPYDSD---LKYVDLDEFLSDNGIPVDGNTSQTSTGGAPTPAANLTG 163
Q+AFLGP +WDKTLPYD D L+Y+DL+EFLS+NGIP S + +P P
Sbjct: 61 QSAFLGPTLWDKTLPYDGDTFQLEYMDLEEFLSENGIP----PSPSQHDHSPHPPGLQPA 116
Query: 164 GHTTTTLQNVTSTISGRLSPCGSSQASVMTKXXXXXXXXXXXXXLT--ISP--------- 212
T ++ +++S + L P G + M I P
Sbjct: 117 SSTAPSVMDLSSRATAPLHP-GIPSPNCMQNPIRPGQLLPANRNTPSPIDPDTIQVPVGY 175
Query: 213 -PSPADSTLSFTSSTRDFDPRSRTFSDEELKPQPMVKKSRK 252
P PAD LS FDPR R FS+EELKPQPM+KK+RK
Sbjct: 176 EPDPADLALSSIPGPEMFDPRKRKFSEEELKPQPMIKKARK 216
Score = 50 (22.7 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 252 KQNMGLRQEMERLKKENLSLRDKLSKF 278
K+N LRQE+ L+KE ++ L+K+
Sbjct: 262 KENSALRQEVADLRKELGKCKNILAKY 288
>UNIPROTKB|J9P0W7 [details] [associations]
symbol:HLF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR004827
Pfam:PF07716 PROSITE:PS50217 SMART:SM00338 GO:GO:0043565
GO:GO:0003700 GeneTree:ENSGT00440000039070 CTD:3131 KO:K09057
OMA:PTYGVLK EMBL:AAEX03006553 RefSeq:XP_866525.2
ProteinModelPortal:J9P0W7 Ensembl:ENSCAFT00000043952 GeneID:609564
KEGG:cfa:609564 Uniprot:J9P0W7
Length = 295
Score = 237 (88.5 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 60/160 (37%), Positives = 82/160 (51%)
Query: 107 QAAFLGPNIWDKTLPYDSD---LKYVDLDEFLSDNGIPVDGNTSQTSTGGAPTPAANLTG 163
Q+AFLGP +WDKTLPYD D L+Y+DL+EFLS+NGIP S + +P P
Sbjct: 61 QSAFLGPTLWDKTLPYDGDTFQLEYMDLEEFLSENGIP----PSPSQHDHSPHPPGLQPA 116
Query: 164 GHTTTTLQNVTSTISGRLSP------CGSS--QASVMTKXXXXXXXXXXXXXLTIS---P 212
+ ++ +++S S + P C S + + + +
Sbjct: 117 SSSAPSVMDLSSRASAPIHPGIPSPNCMQSPIRPGQLLPANRNTPSPIDPDTIQVPVGYE 176
Query: 213 PSPADSTLSFTSSTRDFDPRSRTFSDEELKPQPMVKKSRK 252
P PAD LS FDPR R FS+EELKPQPM+KK+RK
Sbjct: 177 PDPADLALSSIPGQEMFDPRKRKFSEEELKPQPMIKKARK 216
Score = 50 (22.7 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 252 KQNMGLRQEMERLKKENLSLRDKLSKF 278
K+N LRQE+ L+KE ++ L+K+
Sbjct: 262 KENSALRQEVADLRKELGKCKNILAKY 288
>UNIPROTKB|E1BFR1 [details] [associations]
symbol:HLF "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR004827 Pfam:PF07716
PROSITE:PS50217 SMART:SM00338 GO:GO:0043565 GO:GO:0003700
GeneTree:ENSGT00440000039070 CTD:3131 KO:K09057 OMA:PTYGVLK
EMBL:DAAA02048215 EMBL:DAAA02048216 IPI:IPI00717978
RefSeq:NP_001179366.1 UniGene:Bt.39657 Ensembl:ENSBTAT00000008682
GeneID:516069 KEGG:bta:516069 NextBio:20872120 Uniprot:E1BFR1
Length = 295
Score = 234 (87.4 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 60/160 (37%), Positives = 81/160 (50%)
Query: 107 QAAFLGPNIWDKTLPYDSD---LKYVDLDEFLSDNGIPVDGNTSQTSTGGAPTPAANLTG 163
Q+AFLGP +WDKTLPYD D L+Y+DL+EFLS+NGIP S + +P P
Sbjct: 61 QSAFLGPTLWDKTLPYDGDTFQLEYMDLEEFLSENGIP----PSPSQHDHSPHPPGLQPT 116
Query: 164 GHTTTTLQNVTSTISGRLSP------CGSS--QASVMTKXXXXXXXXXXXXXLTIS---P 212
++ +++S S + P C S + + + +
Sbjct: 117 SSAAPSVMDLSSRASAPIHPGIPPPNCVQSPMRPGQLLPANRNTPSPIDPDTIQVPVGYE 176
Query: 213 PSPADSTLSFTSSTRDFDPRSRTFSDEELKPQPMVKKSRK 252
P PAD LS FDPR R FS+EELKPQPM+KK+RK
Sbjct: 177 PDPADLALSSIPGQEMFDPRKRKFSEEELKPQPMIKKARK 216
Score = 50 (22.7 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 252 KQNMGLRQEMERLKKENLSLRDKLSKF 278
K+N LRQE+ L+KE ++ L+K+
Sbjct: 262 KENSALRQEVADLRKELGKCKNILAKY 288
>ZFIN|ZDB-GENE-061013-159 [details] [associations]
symbol:hlfa "hepatic leukemia factor a"
species:7955 "Danio rerio" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR004827 Pfam:PF07716 PROSITE:PS50217
SMART:SM00338 ZFIN:ZDB-GENE-061013-159 GO:GO:0043565 GO:GO:0003700
GeneTree:ENSGT00440000039070 HOGENOM:HOG000234383
HOVERGEN:HBG004983 eggNOG:NOG329624 KO:K09057 OrthoDB:EOG4QNMWZ
EMBL:CABZ01087224 EMBL:CABZ01087225 EMBL:CABZ01087226
EMBL:CABZ01087227 EMBL:CABZ01087228 EMBL:CABZ01087229 EMBL:BC124624
EMBL:GU434294 IPI:IPI00803516 RefSeq:NP_001070802.1
UniGene:Dr.117821 UniGene:Dr.152872 Ensembl:ENSDART00000127157
GeneID:768192 KEGG:dre:768192 CTD:768192 NextBio:20918506
Uniprot:Q08BP9
Length = 294
Score = 236 (88.1 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
Identities = 59/161 (36%), Positives = 88/161 (54%)
Query: 102 STVEA-QAAFLGPNIWDKTLPYDSD---LKYVDLDEFLSDNGIPVDGNTSQTSTGGAPT- 156
ST+ Q+AFLGP +WDKTLPY++D L+Y+DL+EFL +N IP + + Q+ P
Sbjct: 55 STLNTPQSAFLGPTLWDKTLPYNADNFQLEYMDLEEFLLENNIPANPQSEQSQPSQPPLQ 114
Query: 157 -PAANLTGGHTTTTLQNVTSTISGRLSP-C--GSSQASVMTKXXXXXXXXXXXXXLTIS- 211
P+A T + ++ +S+ +G ++ C ++ + + ++
Sbjct: 115 PPSAPPTPSVVDLSNRDNSSSHNGMVAQNCLQNPTRPGLPASRDTPSPIDPDSIQVPLAY 174
Query: 212 PPSPADSTLSFTSSTRDFDPRSRTFSDEELKPQPMVKKSRK 252
P PAD LS FDPR R FS EELKPQPM+KK+RK
Sbjct: 175 EPDPADLALSSVPGQEIFDPRKRKFSAEELKPQPMIKKARK 215
Score = 44 (20.5 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 252 KQNMGLRQEMERLKKENLSLRDKLSKF 278
K+N LR E+ L+KE ++ L+K+
Sbjct: 261 KENAALRAEVADLRKELGRCKNVLAKY 287
>UNIPROTKB|I3L4R4 [details] [associations]
symbol:HLF "Hepatic leukemia factor" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR004827 Pfam:PF07716
PROSITE:PS50217 SMART:SM00338 GO:GO:0043565 GO:GO:0003700
HGNC:HGNC:4977 EMBL:AC007638 Ensembl:ENST00000572002 Bgee:I3L4R4
Uniprot:I3L4R4
Length = 236
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 66/185 (35%), Positives = 94/185 (50%)
Query: 107 QAAFLGPNIWDKTLPYDSD---LKYVDLDEFLSDNGIPVDGNTSQTSTGGAPTPAANLTG 163
Q+AFLGP +WDKTLPYD D L+Y+DL+EFLS+NGIP S + +P P
Sbjct: 1 QSAFLGPTLWDKTLPYDGDTFQLEYMDLEEFLSENGIP----PSPSQHDHSPHPPGLQPA 56
Query: 164 GHTTTTLQNVTSTISGRLSP------CGSS--QASVMTKXXXXXXXXXXXXXLTIS---P 212
++ +++S S L P C S + + + +
Sbjct: 57 SSAAPSVMDLSSRASAPLHPGIPSPNCMQSPIRPGQLLPANRNTPSPIDPDTIQVPVGYE 116
Query: 213 PSPADSTLSFTSSTRDFDPRSRTFSDEELKPQPMVKKSRKQNM--GLRQEME---RLKKE 267
P PAD LS FDPR R FS+EELKPQPM+KK+RK + L+Q+ + R +K
Sbjct: 117 PDPADLALSSIPGQEMFDPRKRKFSEEELKPQPMIKKARKVFIPDDLKQDDKYWARRRKN 176
Query: 268 NLSLR 272
N++ +
Sbjct: 177 NMAAK 181
>UNIPROTKB|E2RRC5 [details] [associations]
symbol:DBP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR004827
Pfam:PF07716 PROSITE:PS50217 SMART:SM00338 GO:GO:0001077
GO:GO:0000977 GeneTree:ENSGT00440000039070 CTD:1628 KO:K09056
OMA:KEPTSCL EMBL:AAEX03000816 RefSeq:XP_003432610.1
Ensembl:ENSCAFT00000006342 GeneID:100685867 KEGG:cfa:100685867
Uniprot:E2RRC5
Length = 325
Score = 198 (74.8 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 52/160 (32%), Positives = 77/160 (48%)
Query: 111 LGPNIWDKTLPYDSDLKYVDLDEFLSDNGIPVD----GNTSQTSTG---GAPTPAANLTG 163
L P +W++TLP+ D++YVDLD FL ++G+P G S + AP+P G
Sbjct: 100 LAPLLWERTLPF-GDVEYVDLDAFLLEHGLPPSPPPPGGPSPAPSPVRTPAPSPGPGSCG 158
Query: 164 GHTTTTLQNVTSTISGRLSPCGSSQASVMTKXXXXXXXXXXXXXLTISPPSPADSTLSFT 223
+ + T + L G +A + ++ L P PAD LS
Sbjct: 159 SASPRSSPGHAPTRAA-LGAAGGHRAGLTSRDTPSPVDPDTVEVLMTFEPDPADLALSSI 217
Query: 224 SSTRDFDPRSRTFSDEELKPQPMVKKSRKQNMGLRQEMER 263
FDPR FS+EELKPQP++KK+RK + Q+ E+
Sbjct: 218 PGHETFDPRRHRFSEEELKPQPIMKKARKIQVPEEQKDEK 257
Score = 41 (19.5 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 252 KQNMGLRQEMERLKKENLSLRDKLSKF 278
K+N LRQE+ +++E R LS++
Sbjct: 292 KENALLRQEVVAVRQELSHYRAVLSRY 318
>MGI|MGI:94866 [details] [associations]
symbol:Dbp "D site albumin promoter binding protein"
species:10090 "Mus musculus" [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=ISO]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
[GO:0007623 "circadian rhythm" evidence=TAS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048511 "rhythmic process" evidence=IEA]
InterPro:IPR004827 Pfam:PF07716 PROSITE:PS00036 PROSITE:PS50217
SMART:SM00338 MGI:MGI:94866 GO:GO:0005654 GO:GO:0006355
GO:GO:0007623 GO:GO:0042127 GO:GO:0001077 GO:GO:0000977
Reactome:REACT_109335 Reactome:REACT_24972
GeneTree:ENSGT00440000039070 CTD:1628 eggNOG:NOG238019
HOGENOM:HOG000234383 HOVERGEN:HBG004983 KO:K09056 OMA:KEPTSCL
OrthoDB:EOG4PRSRN EMBL:U29762 EMBL:BC018323 IPI:IPI00122519
RefSeq:NP_058670.2 UniGene:Mm.24222 UniGene:Mm.378235
ProteinModelPortal:Q60925 SMR:Q60925 STRING:Q60925
PhosphoSite:Q60925 PRIDE:Q60925 Ensembl:ENSMUST00000080885
GeneID:13170 KEGG:mmu:13170 UCSC:uc009gws.2 InParanoid:Q60925
NextBio:283264 Bgee:Q60925 CleanEx:MM_DBP Genevestigator:Q60925
GermOnline:ENSMUSG00000059824 Uniprot:Q60925
Length = 325
Score = 197 (74.4 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 52/165 (31%), Positives = 80/165 (48%)
Query: 106 AQAAFLGPNIWDKTLPYDSDLKYVDLDEFLSDNGIPVD----GNTSQT-STGGAPTPAAN 160
A + P +W++TLP+ D++YVDLD FL ++G+P G S S P P+
Sbjct: 95 AGPSLFAPLLWERTLPF-GDVEYVDLDAFLLEHGLPPSPPPPGGLSPAPSPARTPAPSPG 153
Query: 161 LTGGHTTTTLQNVTSTISGR--LSPCGSSQASVMTKXXXXXXXXXXXXXLTISPPSPADS 218
G ++++ ++ R L G +A + ++ L P PAD
Sbjct: 154 -PGSCSSSSPRSSPGHAPARATLGAAGGHRAGLTSRDTPSPVDPDTVEVLMTFEPDPADL 212
Query: 219 TLSFTSSTRDFDPRSRTFSDEELKPQPMVKKSRKQNMGLRQEMER 263
LS FDPR FS+EELKPQP++KK+RK + Q+ E+
Sbjct: 213 ALSSIPGHETFDPRRHRFSEEELKPQPIMKKARKVQVPEEQKDEK 257
Score = 41 (19.5 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 252 KQNMGLRQEMERLKKENLSLRDKLSKF 278
K+N LRQE+ +++E R LS++
Sbjct: 292 KENALLRQEVVAVRQELSHYRAVLSRY 318
>RGD|2491 [details] [associations]
symbol:Dbp "D site of albumin promoter (albumin D-box) binding
protein" species:10116 "Rattus norvegicus" [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISO;IDA] [GO:0001889 "liver development" evidence=IEP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0048511 "rhythmic process" evidence=IEA] InterPro:IPR004827
Pfam:PF07716 PROSITE:PS00036 PROSITE:PS50217 SMART:SM00338 RGD:2491
GO:GO:0005634 GO:GO:0001889 GO:GO:0048511 GO:GO:0001077 GO:GO:0000977
GeneTree:ENSGT00440000039070 CTD:1628 eggNOG:NOG238019
HOGENOM:HOG000234383 HOVERGEN:HBG004983 KO:K09056 OMA:KEPTSCL
OrthoDB:EOG4PRSRN EMBL:J03179 EMBL:BC087668 IPI:IPI00212835
PIR:A34894 RefSeq:NP_036675.1 UniGene:Rn.11274
ProteinModelPortal:P16443 STRING:P16443 Ensembl:ENSRNOT00000028546
GeneID:24309 KEGG:rno:24309 UCSC:RGD:2491 InParanoid:P16443
NextBio:602941 ArrayExpress:P16443 Genevestigator:P16443
GermOnline:ENSRNOG00000021027 Uniprot:P16443
Length = 325
Score = 197 (74.4 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 52/165 (31%), Positives = 80/165 (48%)
Query: 106 AQAAFLGPNIWDKTLPYDSDLKYVDLDEFLSDNGIPVD----GNTSQT-STGGAPTPAAN 160
A + P +W++TLP+ D++YVDLD FL ++G+P G S S P P+
Sbjct: 95 AGPSLFAPLLWERTLPF-GDVEYVDLDAFLLEHGLPPSPPPPGGLSPAPSPARTPAPSPG 153
Query: 161 LTGGHTTTTLQNVTSTISGR--LSPCGSSQASVMTKXXXXXXXXXXXXXLTISPPSPADS 218
G ++++ ++ R L G +A + ++ L P PAD
Sbjct: 154 -PGSCSSSSPRSSPGHAPARATLGAAGGHRAGLTSRDTPSPVDPDTVEVLMTFEPDPADL 212
Query: 219 TLSFTSSTRDFDPRSRTFSDEELKPQPMVKKSRKQNMGLRQEMER 263
LS FDPR FS+EELKPQP++KK+RK + Q+ E+
Sbjct: 213 ALSSIPGHETFDPRRHRFSEEELKPQPIMKKARKVQVPEEQKDEK 257
Score = 41 (19.5 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 252 KQNMGLRQEMERLKKENLSLRDKLSKF 278
K+N LRQE+ +++E R LS++
Sbjct: 292 KENALLRQEVVAVRQELSHYRAVLSRY 318
>UNIPROTKB|F1RIP8 [details] [associations]
symbol:LOC100738095 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR004827
Pfam:PF07716 PROSITE:PS50217 SMART:SM00338 GO:GO:0043565
GO:GO:0003700 GeneTree:ENSGT00440000039070 KO:K09056 OMA:KEPTSCL
EMBL:CU929759 EMBL:FQ073836 EMBL:FQ311972 RefSeq:XP_003127334.2
RefSeq:XP_003481939.1 Ensembl:ENSSSCT00000003494
Ensembl:ENSSSCT00000025420 GeneID:100524747 GeneID:100738095
KEGG:ssc:100524747 KEGG:ssc:100738095 Uniprot:F1RIP8
Length = 325
Score = 194 (73.4 bits), Expect = 9.1e-18, Sum P(2) = 9.1e-18
Identities = 51/160 (31%), Positives = 76/160 (47%)
Query: 111 LGPNIWDKTLPYDSDLKYVDLDEFLSDNGIPVD----GNTSQTSTG---GAPTPAANLTG 163
L P +W++TLP+ D++YVDLD FL ++G+P G S + AP+P G
Sbjct: 100 LAPLLWERTLPF-GDVEYVDLDAFLLEHGLPPSPPPPGGPSPAPSPVRTPAPSPGPGSCG 158
Query: 164 GHTTTTLQNVTSTISGRLSPCGSSQASVMTKXXXXXXXXXXXXXLTISPPSPADSTLSFT 223
+ + + L G +A + ++ L P PAD LS
Sbjct: 159 SASPRSSPG-HAPARAALGAAGGHRAGLTSRDTPSPVDPDTVEVLMTFEPDPADLALSSI 217
Query: 224 SSTRDFDPRSRTFSDEELKPQPMVKKSRKQNMGLRQEMER 263
FDPR FS+EELKPQP++KK+RK + Q+ E+
Sbjct: 218 PGHETFDPRRHRFSEEELKPQPIMKKARKIQVPEEQKDEK 257
Score = 41 (19.5 bits), Expect = 9.1e-18, Sum P(2) = 9.1e-18
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 252 KQNMGLRQEMERLKKENLSLRDKLSKF 278
K+N LRQE+ +++E R LS++
Sbjct: 292 KENALLRQEVVAVRQELSHYRAVLSRY 318
>UNIPROTKB|Q32PF6 [details] [associations]
symbol:DBP "D site-binding protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
InterPro:IPR004827 Pfam:PF07716 PROSITE:PS00036 PROSITE:PS50217
SMART:SM00338 GO:GO:0005634 GO:GO:0048511 GO:GO:0001077
GO:GO:0000977 GeneTree:ENSGT00440000039070 EMBL:BC108134
IPI:IPI00717754 RefSeq:NP_001032522.1 UniGene:Bt.38784 PRIDE:Q32PF6
Ensembl:ENSBTAT00000008883 GeneID:503577 KEGG:bta:503577 CTD:1628
eggNOG:NOG238019 HOGENOM:HOG000234383 HOVERGEN:HBG004983
InParanoid:Q32PF6 KO:K09056 OMA:KEPTSCL OrthoDB:EOG4PRSRN
NextBio:20866214 ArrayExpress:Q32PF6 Uniprot:Q32PF6
Length = 325
Score = 193 (73.0 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 51/160 (31%), Positives = 76/160 (47%)
Query: 111 LGPNIWDKTLPYDSDLKYVDLDEFLSDNGIPVD----GNTSQTSTG---GAPTPAANLTG 163
L P +W++TLP+ D++YVDLD FL ++G+P G S + AP+P G
Sbjct: 100 LAPLLWERTLPF-GDVEYVDLDAFLLEHGLPPSPPPPGGPSPAPSPVRTPAPSPRPGSCG 158
Query: 164 GHTTTTLQNVTSTISGRLSPCGSSQASVMTKXXXXXXXXXXXXXLTISPPSPADSTLSFT 223
+ + + L G +A + ++ L P PAD LS
Sbjct: 159 SASPRSSPG-HAPARAALGAAGGHRAGLTSRDTPSPVDPDTVEVLMTFEPDPADLALSSI 217
Query: 224 SSTRDFDPRSRTFSDEELKPQPMVKKSRKQNMGLRQEMER 263
FDPR FS+EELKPQP++KK+RK + Q+ E+
Sbjct: 218 PGHETFDPRRHRFSEEELKPQPIMKKARKIQVPEEQKDEK 257
Score = 41 (19.5 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 252 KQNMGLRQEMERLKKENLSLRDKLSKF 278
K+N LRQE+ +++E R LS++
Sbjct: 292 KENALLRQEVVAVRQELSHYRAVLSRY 318
>UNIPROTKB|Q10586 [details] [associations]
symbol:DBP "D site-binding protein" species:9606 "Homo
sapiens" [GO:0048511 "rhythmic process" evidence=IEA] [GO:0001889
"liver development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IDA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IDA] InterPro:IPR004827
Pfam:PF07716 PROSITE:PS00036 PROSITE:PS50217 SMART:SM00338
GO:GO:0005634 GO:GO:0048511 GO:GO:0042127 GO:GO:0001077
EMBL:CH471177 GO:GO:0000977 Reactome:REACT_24941 CTD:1628
eggNOG:NOG238019 HOGENOM:HOG000234383 HOVERGEN:HBG004983 KO:K09056
OMA:KEPTSCL OrthoDB:EOG4PRSRN EMBL:U06936 EMBL:U48213 EMBL:U48212
EMBL:EF015902 EMBL:U79283 EMBL:BT006836 EMBL:BC011965 EMBL:D28468
IPI:IPI00305559 PIR:A55558 RefSeq:NP_001343.2 UniGene:Hs.414480
UniGene:Hs.528006 ProteinModelPortal:Q10586 SMR:Q10586
IntAct:Q10586 STRING:Q10586 PhosphoSite:Q10586 DMDM:1706312
PRIDE:Q10586 DNASU:1628 Ensembl:ENST00000222122 GeneID:1628
KEGG:hsa:1628 UCSC:uc002pjx.4 GeneCards:GC19M049133 HGNC:HGNC:2697
HPA:HPA034999 MIM:124097 neXtProt:NX_Q10586 PharmGKB:PA27165
InParanoid:Q10586 PhylomeDB:Q10586 GenomeRNAi:1628 NextBio:6680
Bgee:Q10586 CleanEx:HS_DBP Genevestigator:Q10586
GermOnline:ENSG00000105516 Uniprot:Q10586
Length = 325
Score = 192 (72.6 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 50/160 (31%), Positives = 77/160 (48%)
Query: 111 LGPNIWDKTLPYDSDLKYVDLDEFLSDNGIPVD-----GNTSQTSTGGAPTPAANLTGGH 165
L P +W++TLP+ D++YVDLD FL ++G+P G + + S P P+ G
Sbjct: 100 LAPLLWERTLPF-GDVEYVDLDAFLLEHGLPPSPPPPGGPSPEPSPARTPAPSPG-PGSC 157
Query: 166 TTTTLQNVTSTISGR--LSPCGSSQASVMTKXXXXXXXXXXXXXLTISPPSPADSTLSFT 223
+ + ++ R L +A + ++ L P PAD LS
Sbjct: 158 GSASPRSSPGHAPARAALGTASGHRAGLTSRDTPSPVDPDTVEVLMTFEPDPADLALSSI 217
Query: 224 SSTRDFDPRSRTFSDEELKPQPMVKKSRKQNMGLRQEMER 263
FDPR FS+EELKPQP++KK+RK + Q+ E+
Sbjct: 218 PGHETFDPRRHRFSEEELKPQPIMKKARKIQVPEEQKDEK 257
Score = 41 (19.5 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 252 KQNMGLRQEMERLKKENLSLRDKLSKF 278
K+N LRQE+ +++E R LS++
Sbjct: 292 KENALLRQEVVAVRQELSHYRAVLSRY 318
>ZFIN|ZDB-GENE-110420-3 [details] [associations]
symbol:hlfb "hepatic leukemia factor b" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR004827 Pfam:PF07716 PROSITE:PS50217 SMART:SM00338
ZFIN:ZDB-GENE-110420-3 GO:GO:0043565 GO:GO:0003700 EMBL:GU434295
IPI:IPI00494283 RefSeq:NP_001183988.1 UniGene:Dr.69789
GeneID:557886 KEGG:dre:557886 CTD:557886 NextBio:20882210
Uniprot:E2E3F2
Length = 297
Score = 148 (57.2 bits), Expect = 4.2e-17, Sum P(3) = 4.2e-17
Identities = 51/145 (35%), Positives = 70/145 (48%)
Query: 123 DS-DLKYVDLDEFLSDNGIPV-----DGNTSQ---TSTGGAPTPAANLTGGHTTTTLQNV 173
DS L+Y+DL+EFLS+NGIP D N Q ++ ++ ++
Sbjct: 74 DSFQLEYMDLEEFLSENGIPSSPAQHDQNLHQHHHQQQQQHQQQQQQVSMPQGPISVMDL 133
Query: 174 TS-TISGRLSP--CGSSQA-SVMTKXXXXXXXXX-XXXXLTIS-PPSPADSTLSFTSSTR 227
+S +I +SP C S SV+ + +S P PAD LS
Sbjct: 134 SSRSIHTAISPQNCLHSPGRSVLPPSRNTPSPVDPEALHIPVSYEPDPADLALSSVPGQE 193
Query: 228 DFDPRSRTFSDEELKPQPMVKKSRK 252
FDPR R FS+EELKPQPM+KK+RK
Sbjct: 194 VFDPRKRKFSEEELKPQPMIKKARK 218
Score = 140 (54.3 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 107 QAAFLGPNIWDKTLPYDSD---LKYVDLDEFLSDNGIP 141
Q+AFLGP +WDKTL YD D L+Y+DL+EFLS+NGIP
Sbjct: 56 QSAFLGPTLWDKTLSYDGDSFQLEYMDLEEFLSENGIP 93
Score = 84 (34.6 bits), Expect = 4.2e-17, Sum P(3) = 4.2e-17
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 52 QAAFLGPNIWDKTLPYDSD 70
Q+AFLGP +WDKTL YD D
Sbjct: 56 QSAFLGPTLWDKTLSYDGD 74
Score = 55 (24.4 bits), Expect = 4.2e-17, Sum P(3) = 4.2e-17
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 252 KQNMGLRQEMERLKKENLSLRDKLSKF 278
K+NM LRQE+ L+KE ++ L+K+
Sbjct: 264 KENMALRQEVADLRKELGRCKNILTKY 290
Score = 47 (21.6 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 10/41 (24%), Positives = 23/41 (56%)
Query: 234 RTFSDEELKPQPMVKKSRKQNMGLRQEME--RLKKENLSLR 272
+ F ++LK + + RK N+ ++ + RLK+ +++R
Sbjct: 218 KIFIPDDLKDEKYWARRRKNNVAAKRSRDARRLKENQIAIR 258
Score = 36 (17.7 bits), Expect = 3.7e-15, Sum P(3) = 3.7e-15
Identities = 6/13 (46%), Positives = 12/13 (92%)
Query: 264 LKKENLSLRDKLS 276
L+KEN++LR +++
Sbjct: 262 LEKENMALRQEVA 274
>UNIPROTKB|E2RCX8 [details] [associations]
symbol:TEF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR004827 Pfam:PF07716 PROSITE:PS50217
SMART:SM00338 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003690 GeneTree:ENSGT00440000039070 OMA:ETRYGPF
EMBL:AAEX03007299 EMBL:AAEX03007298 Ensembl:ENSCAFT00000001669
NextBio:20893577 Uniprot:E2RCX8
Length = 311
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 64/184 (34%), Positives = 92/184 (50%)
Query: 102 STVEAQAAFLGPNIWDKTLPYDSD---LKYVDLDEFLSDNGIPVDGNTSQTSTG-GAPTP 157
ST+ A+ + P IWDKT+PYD + L+Y+DLDEFL +NGIP S T P
Sbjct: 78 STMAVSASLMPP-IWDKTIPYDGESFHLEYMDLDEFLLENGIPA----SPTHLAQNLLLP 132
Query: 158 AANLTG---GHTTTTLQNVTSTISGRLSPCGSSQASVMTKXXXXXXXXXXX-XXLTIS-P 212
A L G ++T +ST + S SS S + K + ++
Sbjct: 133 VAELEGKESASSSTASPPSSSTAVFQASETASSTESSLEKERETPSPIDPNCVEVDVNFN 192
Query: 213 PSPADSTLSFTSSTRDFDPRSRTFSDEELKPQPMVKKSRKQNMGLRQEME----RLKKEN 268
P PAD LS F+PR F++E+LKPQPM+KK++K + Q+ E R KK N
Sbjct: 193 PDPADLVLSSVPGGELFNPRKHKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNN 252
Query: 269 LSLR 272
++ +
Sbjct: 253 VAAK 256
>UNIPROTKB|E1B704 [details] [associations]
symbol:LOC616076 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR004827 Pfam:PF07716 PROSITE:PS50217
SMART:SM00338 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003690 GeneTree:ENSGT00440000039070 OMA:ETRYGPF
EMBL:DAAA02014732 IPI:IPI00708826 Ensembl:ENSBTAT00000022056
Uniprot:E1B704
Length = 310
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 64/183 (34%), Positives = 93/183 (50%)
Query: 102 STVEAQAAFLGPNIWDKTLPYDSD---LKYVDLDEFLSDNGIPVDGNTSQTS-TGGAPTP 157
ST+ A+ + P IWDKT+PYD + L+Y+DLDEFL +NGIP S T P
Sbjct: 78 STMAVSASLMPP-IWDKTIPYDGESFHLEYMDLDEFLLENGIPA----SPTHLVQNLLLP 132
Query: 158 AANLTGGHT--TTTLQNVTSTISGRLSPCGSSQASVMTKXXXXXXXXXXX-XXLTIS-PP 213
A L G + ++T +ST + S SS S + K + ++ P
Sbjct: 133 VAELEGKESASSSTASPPSSTAVFQPSETVSSTESSLEKERETPSPIDPNCVEVDVNFNP 192
Query: 214 SPADSTLSFTSSTRDFDPRSRTFSDEELKPQPMVKKSRKQNMGLRQEME----RLKKENL 269
PAD LS F+PR F++E+LKPQPM+KK++K + Q+ E R KK N+
Sbjct: 193 DPADLVLSSVPGGELFNPRKHKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNV 252
Query: 270 SLR 272
+ +
Sbjct: 253 AAK 255
>UNIPROTKB|E2RCY0 [details] [associations]
symbol:TEF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR004827
Pfam:PF07716 PROSITE:PS50217 SMART:SM00338 GO:GO:0043565
GO:GO:0003700 GeneTree:ENSGT00440000039070 EMBL:AAEX03007299
EMBL:AAEX03007298 NextBio:20893577 Ensembl:ENSCAFT00000001667
Uniprot:E2RCY0
Length = 347
Score = 208 (78.3 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 64/184 (34%), Positives = 92/184 (50%)
Query: 102 STVEAQAAFLGPNIWDKTLPYDSD---LKYVDLDEFLSDNGIPVDGNTSQTSTG-GAPTP 157
ST+ A+ + P IWDKT+PYD + L+Y+DLDEFL +NGIP S T P
Sbjct: 54 STMAVSASLMPP-IWDKTIPYDGESFHLEYMDLDEFLLENGIPA----SPTHLAQNLLLP 108
Query: 158 AANLTG---GHTTTTLQNVTSTISGRLSPCGSSQASVMTKXXXXXXXXXXX-XXLTIS-P 212
A L G ++T +ST + S SS S + K + ++
Sbjct: 109 VAELEGKESASSSTASPPSSSTAVFQASETASSTESSLEKERETPSPIDPNCVEVDVNFN 168
Query: 213 PSPADSTLSFTSSTRDFDPRSRTFSDEELKPQPMVKKSRKQNMGLRQEME----RLKKEN 268
P PAD LS F+PR F++E+LKPQPM+KK++K + Q+ E R KK N
Sbjct: 169 PDPADLVLSSVPGGELFNPRKHKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNN 228
Query: 269 LSLR 272
++ +
Sbjct: 229 VAAK 232
>MGI|MGI:98663 [details] [associations]
symbol:Tef "thyrotroph embryonic factor" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0046982 "protein heterodimerization activity"
evidence=ISO] [GO:0048511 "rhythmic process" evidence=IEA]
InterPro:IPR004827 Pfam:PF07716 PROSITE:PS00036 PROSITE:PS50217
SMART:SM00338 MGI:MGI:98663 GO:GO:0005634 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0048511
GO:GO:0003690 GeneTree:ENSGT00440000039070 HOVERGEN:HBG004983
CTD:7008 eggNOG:NOG323431 KO:K09058 OMA:ETRYGPF OrthoDB:EOG444KM8
ChiTaRS:TEF EMBL:AF194420 EMBL:AY540631 EMBL:AY540632 EMBL:AK075601
EMBL:AK141606 EMBL:AK145125 EMBL:AK147965 EMBL:AK154472
EMBL:BC017689 EMBL:BC036982 IPI:IPI00124113 IPI:IPI00172236
IPI:IPI00759849 RefSeq:NP_059072.1 RefSeq:NP_705617.2
UniGene:Mm.270278 ProteinModelPortal:Q9JLC6 SMR:Q9JLC6
STRING:Q9JLC6 PhosphoSite:Q9JLC6 PRIDE:Q9JLC6
Ensembl:ENSMUST00000023024 Ensembl:ENSMUST00000109553 GeneID:21685
KEGG:mmu:21685 UCSC:uc007wxj.2 UCSC:uc007wxk.2 InParanoid:Q9JLC6
NextBio:301004 Bgee:Q9JLC6 CleanEx:MM_TEF Genevestigator:Q9JLC6
GermOnline:ENSMUSG00000022389 Uniprot:Q9JLC6
Length = 301
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 60/184 (32%), Positives = 95/184 (51%)
Query: 102 STVEAQAAFLGPNIWDKTLPYDSD---LKYVDLDEFLSDNGIPVDGNTSQTSTG-GAPTP 157
ST+ A+ + P IWDKT+PYD + L+Y+DLDEFL +NGIP S T P
Sbjct: 68 STMAVSASLMPP-IWDKTIPYDGESFHLEYMDLDEFLLENGIPA----SPTHLAQNLLLP 122
Query: 158 AANLTGGHT-TTTLQNVTSTISGRLSPC---GSSQASVMTKXXXXXXXXXXXXXLTIS-P 212
A L G + +++ + S+ + P S+++S+ + + ++
Sbjct: 123 VAELEGKESASSSTASPPSSSTAIFQPSETVSSTESSLEKERETPSPIDPSCVEVDVNFN 182
Query: 213 PSPADSTLSFTSSTRDFDPRSRTFSDEELKPQPMVKKSRKQNMGLRQEME----RLKKEN 268
P PAD LS F+PR F++E+LKPQPM+KK++K + Q+ E R KK N
Sbjct: 183 PDPADLVLSSVPGGELFNPRKHRFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNN 242
Query: 269 LSLR 272
++ +
Sbjct: 243 VAAK 246
>UNIPROTKB|Q10587 [details] [associations]
symbol:TEF "Thyrotroph embryonic factor" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] InterPro:IPR004827
Pfam:PF07716 PROSITE:PS00036 PROSITE:PS50217 SMART:SM00338
GO:GO:0005634 EMBL:CH471095 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006357 GO:GO:0006351 GO:GO:0048511
GO:GO:0003690 HOVERGEN:HBG004983 CTD:7008 eggNOG:NOG323431
KO:K09058 OMA:ETRYGPF EMBL:U06935 EMBL:U44059 EMBL:CR456592
EMBL:CR541827 EMBL:AK091916 EMBL:AK314906 EMBL:AL035659
EMBL:BC039258 EMBL:BC042476 EMBL:BX537848 IPI:IPI00216670
IPI:IPI00879207 PIR:G02360 RefSeq:NP_001138870.1 RefSeq:NP_003207.1
UniGene:Hs.181159 ProteinModelPortal:Q10587 SMR:Q10587
IntAct:Q10587 STRING:Q10587 PhosphoSite:Q10587 DMDM:51338730
PRIDE:Q10587 DNASU:7008 Ensembl:ENST00000266304
Ensembl:ENST00000406644 Ensembl:ENST00000433913 GeneID:7008
KEGG:hsa:7008 UCSC:uc003azx.3 UCSC:uc003azy.3 GeneCards:GC22P041763
HGNC:HGNC:11722 HPA:HPA028868 MIM:188595 neXtProt:NX_Q10587
PharmGKB:PA36439 InParanoid:Q10587 OrthoDB:EOG444KM8
PhylomeDB:Q10587 ChiTaRS:TEF GenomeRNAi:7008 NextBio:27374
ArrayExpress:Q10587 Bgee:Q10587 CleanEx:HS_TEF
Genevestigator:Q10587 GermOnline:ENSG00000167074 Uniprot:Q10587
Length = 303
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 60/184 (32%), Positives = 95/184 (51%)
Query: 102 STVEAQAAFLGPNIWDKTLPYDSD---LKYVDLDEFLSDNGIPVDGNTSQTSTG-GAPTP 157
ST+ A+ + P IWDKT+PYD + L+Y+DLDEFL +NGIP S T P
Sbjct: 70 STMAVSASLMPP-IWDKTIPYDGESFHLEYMDLDEFLLENGIPA----SPTHLAHNLLLP 124
Query: 158 AANLTGGHT-TTTLQNVTSTISGRLSPC---GSSQASVMTKXXXXXXXXXXXXXLTIS-P 212
A L G + +++ + S+ + P S+++S+ + + ++
Sbjct: 125 VAELEGKESASSSTASPPSSSTAIFQPSETVSSTESSLEKERETPSPIDPNCVEVDVNFN 184
Query: 213 PSPADSTLSFTSSTRDFDPRSRTFSDEELKPQPMVKKSRKQNMGLRQEME----RLKKEN 268
P PAD LS F+PR F++E+LKPQPM+KK++K + Q+ E R KK N
Sbjct: 185 PDPADLVLSSVPGGELFNPRKHKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNN 244
Query: 269 LSLR 272
++ +
Sbjct: 245 VAAK 248
>RGD|3841 [details] [associations]
symbol:Tef "thyrotrophic embryonic factor" species:10116 "Rattus
norvegicus" [GO:0003690 "double-stranded DNA binding"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IDA] [GO:0046982
"protein heterodimerization activity" evidence=IDA] [GO:0048511
"rhythmic process" evidence=IEA] InterPro:IPR004827 Pfam:PF07716
PROSITE:PS00036 PROSITE:PS50217 SMART:SM00338 RGD:3841 GO:GO:0005634
GO:GO:0042803 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0048511 GO:GO:0003690 GO:GO:0046982
GeneTree:ENSGT00440000039070 HOGENOM:HOG000234383 HOVERGEN:HBG004983
CTD:7008 eggNOG:NOG323431 KO:K09058 EMBL:BC101895 EMBL:S58745
IPI:IPI00231140 PIR:A40579 RefSeq:NP_062067.2 UniGene:Rn.59871
ProteinModelPortal:P41224 STRING:P41224 Ensembl:ENSRNOT00000026258
GeneID:29362 KEGG:rno:29362 UCSC:RGD:3841 InParanoid:P41224
NextBio:608892 ArrayExpress:P41224 Genevestigator:P41224
GermOnline:ENSRNOG00000019383 Uniprot:P41224
Length = 301
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 60/184 (32%), Positives = 95/184 (51%)
Query: 102 STVEAQAAFLGPNIWDKTLPYDSD---LKYVDLDEFLSDNGIPVDGNTSQTSTG-GAPTP 157
ST+ A+ + P IWDKT+PYD + L+Y+DLDEFL +NGIP S T P
Sbjct: 68 STMAVSASLMPP-IWDKTIPYDGESFHLEYMDLDEFLLENGIPA----SPTHLAQNLLLP 122
Query: 158 AANLTGGHT-TTTLQNVTSTISGRLSPC---GSSQASVMTKXXXXXXXXXXXXXLTIS-P 212
A L G + +++ + S+ + P S+++S+ + + ++
Sbjct: 123 VAELEGKESASSSTASPPSSSTAIFQPSETVSSTESSLEKERETPSPIDPNCVEVDVNFN 182
Query: 213 PSPADSTLSFTSSTRDFDPRSRTFSDEELKPQPMVKKSRKQNMGLRQEME----RLKKEN 268
P PAD LS F+PR F++E+LKPQPM+KK++K + Q+ E R KK N
Sbjct: 183 PDPADLVLSSVPGGELFNPRKHKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNN 242
Query: 269 LSLR 272
++ +
Sbjct: 243 VAAK 246
>UNIPROTKB|P41224 [details] [associations]
symbol:Tef "Thyrotroph embryonic factor" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR004827
Pfam:PF07716 PROSITE:PS00036 PROSITE:PS50217 SMART:SM00338 RGD:3841
GO:GO:0005634 GO:GO:0042803 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 GO:GO:0048511 GO:GO:0003690
GO:GO:0046982 GeneTree:ENSGT00440000039070 HOGENOM:HOG000234383
HOVERGEN:HBG004983 CTD:7008 eggNOG:NOG323431 KO:K09058
EMBL:BC101895 EMBL:S58745 IPI:IPI00231140 PIR:A40579
RefSeq:NP_062067.2 UniGene:Rn.59871 ProteinModelPortal:P41224
STRING:P41224 Ensembl:ENSRNOT00000026258 GeneID:29362
KEGG:rno:29362 UCSC:RGD:3841 InParanoid:P41224 NextBio:608892
ArrayExpress:P41224 Genevestigator:P41224
GermOnline:ENSRNOG00000019383 Uniprot:P41224
Length = 301
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 60/184 (32%), Positives = 95/184 (51%)
Query: 102 STVEAQAAFLGPNIWDKTLPYDSD---LKYVDLDEFLSDNGIPVDGNTSQTSTG-GAPTP 157
ST+ A+ + P IWDKT+PYD + L+Y+DLDEFL +NGIP S T P
Sbjct: 68 STMAVSASLMPP-IWDKTIPYDGESFHLEYMDLDEFLLENGIPA----SPTHLAQNLLLP 122
Query: 158 AANLTGGHT-TTTLQNVTSTISGRLSPC---GSSQASVMTKXXXXXXXXXXXXXLTIS-P 212
A L G + +++ + S+ + P S+++S+ + + ++
Sbjct: 123 VAELEGKESASSSTASPPSSSTAIFQPSETVSSTESSLEKERETPSPIDPNCVEVDVNFN 182
Query: 213 PSPADSTLSFTSSTRDFDPRSRTFSDEELKPQPMVKKSRKQNMGLRQEME----RLKKEN 268
P PAD LS F+PR F++E+LKPQPM+KK++K + Q+ E R KK N
Sbjct: 183 PDPADLVLSSVPGGELFNPRKHKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNN 242
Query: 269 LSLR 272
++ +
Sbjct: 243 VAAK 246
>ZFIN|ZDB-GENE-060503-802 [details] [associations]
symbol:dbpa "D site of albumin promoter (albumin
D-box) binding protein a" species:7955 "Danio rerio" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR004827 Pfam:PF07716
PROSITE:PS50217 SMART:SM00338 ZFIN:ZDB-GENE-060503-802
GO:GO:0043565 GO:GO:0003700 GeneTree:ENSGT00440000039070
EMBL:CR628325 IPI:IPI00898541 Ensembl:ENSDART00000091707
ArrayExpress:F1QKJ7 Bgee:F1QKJ7 Uniprot:F1QKJ7
Length = 366
Score = 126 (49.4 bits), Expect = 2.7e-16, Sum P(3) = 2.7e-16
Identities = 33/90 (36%), Positives = 51/90 (56%)
Query: 107 QAAFLGPNIWDKTLPYDS---DLKYVDLDEFLSDNGIPV--DGNTSQTSTGGAPTPAANL 161
Q+AFLGP +W++TLP D L+Y+DL+EFL++NG+ GNT T+ A P+ +
Sbjct: 100 QSAFLGPLLWERTLPCDGGLFQLQYMDLEEFLTENGMGCMPSGNTCSTA---AQVPSQST 156
Query: 162 TGGHTTTTLQNVTSTISGRLSPCGSSQASV 191
+ + Q S+ PC SS +S+
Sbjct: 157 QSAVPSQSSQCPPSSSP----PCSSSASSI 182
Score = 125 (49.1 bits), Expect = 2.7e-16, Sum P(3) = 2.7e-16
Identities = 24/40 (60%), Positives = 27/40 (67%)
Query: 213 PSPADSTLSFTSSTRDFDPRSRTFSDEELKPQPMVKKSRK 252
P PAD LS FDPR FS+EELKPQPM+KK+RK
Sbjct: 248 PDPADLALSSVPGQEAFDPRRHRFSEEELKPQPMIKKARK 287
Score = 70 (29.7 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 12/20 (60%), Positives = 16/20 (80%)
Query: 52 QAAFLGPNIWDKTLPYDSDL 71
Q+AFLGP +W++TLP D L
Sbjct: 100 QSAFLGPLLWERTLPCDGGL 119
Score = 45 (20.9 bits), Expect = 2.7e-16, Sum P(3) = 2.7e-16
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 252 KQNMGLRQEMERLKKENLSLRDKLSKF 278
++N LRQE+ ++KE R+ ++K+
Sbjct: 333 RENAALRQEVADMRKELGRCRNIINKY 359
Score = 44 (20.5 bits), Expect = 5.8e-08, Sum P(3) = 5.8e-08
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 120 LPYDSDLKYVDLDEF-LSDNGIPVDGNTSQTSTGGAPTPAANLTGGH 165
LP D + D E +SD P+D + + S GG + GG+
Sbjct: 48 LPIKGDQRGKDCCEMKVSDKDKPLDSD--EDSLGGGGGGGGGMNGGN 92
Score = 43 (20.2 bits), Expect = 7.3e-08, Sum P(3) = 7.3e-08
Identities = 9/38 (23%), Positives = 16/38 (42%)
Query: 140 IPVDGNTSQTSTGGAPTPAANLTGGHTTTTLQNVTSTI 177
+P D + G PA T GH ++ N+ + +
Sbjct: 9 LPPDLPAGTSPQLGPANPAGTTTNGHLNNSMANLKTLL 46
>UNIPROTKB|F1NLV2 [details] [associations]
symbol:TEF "Transcription factor VBP" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR004827 Pfam:PF07716
PROSITE:PS50217 SMART:SM00338 GO:GO:0043565 GO:GO:0003700
GeneTree:ENSGT00440000039070 IPI:IPI00587260 EMBL:AADN02006073
EMBL:AADN02006071 EMBL:AADN02006072 Ensembl:ENSGALT00000030609
Uniprot:F1NLV2
Length = 259
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 56/184 (30%), Positives = 90/184 (48%)
Query: 102 STVEAQAAFLGPNIWDKTLPYDSD---LKYVDLDEFLSDNGIPVDGNTSQTSTGGAPTPA 158
ST+ A+ + P IWDKT+PYD + L+Y+DLDEFL +NGIP T P
Sbjct: 17 STMAVSASLMPP-IWDKTIPYDGESFHLEYMDLDEFLLENGIP-SSPTHLDLNQNPLMPV 74
Query: 159 ANL-----TGGHTTTTLQNVTSTISGRLSPCGSSQASVMTKXXXXXXXXXXXXXLTIS-P 212
A L T + + + ++ + + S+++ + + ++
Sbjct: 75 AKLEEKEPASASTGSPVSSSSTAVYQQSEAASSTESPPQNERNTPSPIDPDCVEVEVNFN 134
Query: 213 PSPADSTLSFTSSTRDFDPRSRTFSDEELKPQPMVKKSRKQNMGLRQEME----RLKKEN 268
P PAD LS F+PR F++E+LKPQPM+KK++K + Q+ E R KK N
Sbjct: 135 PDPADLVLSSVPGGELFNPRKHKFTEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNN 194
Query: 269 LSLR 272
++ +
Sbjct: 195 VAAK 198
>UNIPROTKB|Q92172 [details] [associations]
symbol:TEF "Transcription factor VBP" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IC] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IDA] InterPro:IPR004827 Pfam:PF07716
PROSITE:PS00036 PROSITE:PS50217 SMART:SM00338 GO:GO:0005634
GO:GO:0003677 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0003690 GeneTree:ENSGT00440000039070
HOGENOM:HOG000234383 HOVERGEN:HBG004983 EMBL:U09221 EMBL:U09222
EMBL:U09223 IPI:IPI00578847 IPI:IPI00585610 IPI:IPI00587260
IPI:IPI00587650 PIR:A41524 PIR:S50109 RefSeq:NP_990713.1
UniGene:Gga.5288 ProteinModelPortal:Q92172 STRING:Q92172
Ensembl:ENSGALT00000019503 GeneID:396342 KEGG:gga:396342 CTD:7008
eggNOG:NOG323431 InParanoid:Q92172 KO:K09058 OMA:ETRYGPF
NextBio:20816390 Uniprot:Q92172
Length = 319
Score = 199 (75.1 bits), Expect = 8.9e-16, P = 8.9e-16
Identities = 56/184 (30%), Positives = 90/184 (48%)
Query: 102 STVEAQAAFLGPNIWDKTLPYDSD---LKYVDLDEFLSDNGIPVDGNTSQTSTGGAPTPA 158
ST+ A+ + P IWDKT+PYD + L+Y+DLDEFL +NGIP T P
Sbjct: 77 STMAVSASLMPP-IWDKTIPYDGESFHLEYMDLDEFLLENGIP-SSPTHLDLNQNPLMPV 134
Query: 159 ANL-----TGGHTTTTLQNVTSTISGRLSPCGSSQASVMTKXXXXXXXXXXXXXLTIS-P 212
A L T + + + ++ + + S+++ + + ++
Sbjct: 135 AKLEEKEPASASTGSPVSSSSTAVYQQSEAASSTESPPQNERNTPSPIDPDCVEVEVNFN 194
Query: 213 PSPADSTLSFTSSTRDFDPRSRTFSDEELKPQPMVKKSRKQNMGLRQEME----RLKKEN 268
P PAD LS F+PR F++E+LKPQPM+KK++K + Q+ E R KK N
Sbjct: 195 PDPADLVLSSVPGGELFNPRKHKFTEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNN 254
Query: 269 LSLR 272
++ +
Sbjct: 255 VAAK 258
>ZFIN|ZDB-GENE-050522-224 [details] [associations]
symbol:tefb "thyrotroph embryonic factor b"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0071482 "cellular response to light stimulus" evidence=IMP]
InterPro:IPR004827 Pfam:PF07716 PROSITE:PS50217 SMART:SM00338
ZFIN:ZDB-GENE-050522-224 GO:GO:0043565 GO:GO:0003700
GeneTree:ENSGT00440000039070 GO:GO:0071482 EMBL:CU681842
IPI:IPI00993196 Ensembl:ENSDART00000122388
Ensembl:ENSDART00000148598 Uniprot:F1QEE6
Length = 309
Score = 119 (46.9 bits), Expect = 9.9e-14, Sum P(3) = 9.9e-14
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 108 AAFLGPNIWDKTLPYDSD---LKYVDLDEFLSDNGIPV 142
+A L P IW+KT+PYD + L+Y+DLDEFL +NGIPV
Sbjct: 64 SASLTPAIWEKTIPYDGETFHLEYMDLDEFLLENGIPV 101
Score = 112 (44.5 bits), Expect = 9.9e-14, Sum P(3) = 9.9e-14
Identities = 40/132 (30%), Positives = 60/132 (45%)
Query: 129 VDLDEFLSDNGIPV---DGNTSQTSTGGAPTPAANLTGGHTTTTLQNV----TSTISGRL 181
V L+E L+ G+ DG T Q S+ + PAA T Q+ + T L
Sbjct: 101 VSLEEELN-RGLEAERRDGET-QASSENSEEPAAVPEMPEQMQTEQDEDLSDSQTAEQEL 158
Query: 182 SPCGSSQASVMTKXXXXXXXXXXXXXLTIS-PPSPADSTLSFTSSTRDFDPRSRTFSDEE 240
S +++ S + + + +S P P D LS F+PR FS++E
Sbjct: 159 SEETTAEPSSVPERATPSPVSPEDIEVNVSFQPDPTDLVLSSVPGGELFNPRKHRFSEDE 218
Query: 241 LKPQPMVKKSRK 252
LKPQPM+KK++K
Sbjct: 219 LKPQPMIKKAKK 230
Score = 62 (26.9 bits), Expect = 9.9e-08, Sum P(3) = 9.9e-08
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 53 AAFLGPNIWDKTLPYDSD---LKVM-LSPLVLSTG 83
+A L P IW+KT+PYD + L+ M L +L G
Sbjct: 64 SASLTPAIWEKTIPYDGETFHLEYMDLDEFLLENG 98
Score = 38 (18.4 bits), Expect = 9.9e-14, Sum P(3) = 9.9e-14
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 252 KQNMGLRQEMERLKKE 267
++N LRQ++ L+K+
Sbjct: 276 RENAALRQQVAELRKD 291
>ZFIN|ZDB-GENE-990415-264 [details] [associations]
symbol:tefa "thyrotroph embryonic factor a"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0071482 "cellular response to light stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] InterPro:IPR004827 Pfam:PF07716 PROSITE:PS50217
SMART:SM00338 ZFIN:ZDB-GENE-990415-264 GO:GO:0045893 GO:GO:0043565
GO:GO:0003700 GeneTree:ENSGT00440000039070 HOVERGEN:HBG004983
GO:GO:0071482 KO:K09058 EMBL:BX000473 EMBL:U43671 IPI:IPI00497867
RefSeq:NP_571475.1 UniGene:Dr.32598 STRING:Q9W722 DNASU:30674
Ensembl:ENSDART00000057124 GeneID:30674 KEGG:dre:30674 CTD:30674
InParanoid:Q9W722 NextBio:20807028 Uniprot:Q9W722
Length = 300
Score = 156 (60.0 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 50/165 (30%), Positives = 71/165 (43%)
Query: 126 LKYVDLDEFLSDNGIPVDGNTSQTSTG-GAPTPAANLTGGHTTTTLQNVTSTISGRLSPC 184
L+Y+DL+EFL +NGI N ++S A + T VT L PC
Sbjct: 81 LEYMDLEEFLMENGIAAAENEQKSSEKENIQLTAEEPSTASAVKTAPAVTLLPVMALDPC 140
Query: 185 GSSQASVMTKXXXXXXXXXXXXXLT---ISP----------PSPADSTLSFTSSTRDFDP 231
++ T +T I+P P P D LS FDP
Sbjct: 141 EEEVVTITTSSSSSADNKSEENRMTPDPINPDEIEVDVNFEPDPTDLVLSSIPGGELFDP 200
Query: 232 RSRTFSDEELKPQPMVKKSRKQNMGLRQE----MERLKKENLSLR 272
R FS+EELKPQPM+KK++K + Q+ +R KK N++ +
Sbjct: 201 RKHRFSEEELKPQPMIKKAKKVFVPEDQKDDKYWQRRKKNNVAAK 245
Score = 127 (49.8 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 34/112 (30%), Positives = 48/112 (42%)
Query: 108 AAFLGPNIWDKTLPYDSD---LKYVDLDEFLSDNGIPVDGNTSQTSTG-GAPTPAANLTG 163
+A L P IW+KT+PYD D L+Y+DL+EFL +NGI N ++S A +
Sbjct: 60 SAALTPAIWEKTIPYDGDTFHLEYMDLEEFLMENGIAAAENEQKSSEKENIQLTAEEPST 119
Query: 164 GHTTTTLQNVTSTISGRLSPCGSSQASVMTKXXXXXXXXXXXXXLTISPPSP 215
T VT L PC ++ T +T P +P
Sbjct: 120 ASAVKTAPAVTLLPVMALDPCEEEVVTITTSSSSSADNKSEENRMTPDPINP 171
Score = 65 (27.9 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 53 AAFLGPNIWDKTLPYDSD 70
+A L P IW+KT+PYD D
Sbjct: 60 SAALTPAIWEKTIPYDGD 77
Score = 41 (19.5 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 252 KQNMGLRQEMERLKKE 267
++N LRQE+ L+K+
Sbjct: 267 RENSALRQEVAELRKD 282
>UNIPROTKB|A8K1X8 [details] [associations]
symbol:HLF "Hepatic leukemia factor" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR004827 Pfam:PF07716
PROSITE:PS50217 SMART:SM00338 GO:GO:0043565 GO:GO:0003700
HOVERGEN:HBG004983 UniGene:Hs.196952 HGNC:HGNC:4977 EMBL:AC007638
EMBL:AK290043 IPI:IPI01011539 SMR:A8K1X8 STRING:A8K1X8
Ensembl:ENST00000430986 Ensembl:ENST00000573945
Ensembl:ENST00000575345 Uniprot:A8K1X8
Length = 210
Score = 147 (56.8 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 44/135 (32%), Positives = 61/135 (45%)
Query: 129 VDLDEFLSDNGIPVDGNTSQTSTGGAPTPAANLTGGHTTTTLQNVTSTISGRLSP----- 183
+DL+EFLS+NGIP S + +P P ++ +++S S L P
Sbjct: 1 MDLEEFLSENGIP----PSPSQHDHSPHPPGLQPASSAAPSVMDLSSRASAPLHPGIPSP 56
Query: 184 -CGSS--QASVMTKXXXXXXXXXXXXXLTIS---PPSPADSTLSFTSSTRDFDPRSRTFS 237
C S + + + + P PAD LS FDPR R FS
Sbjct: 57 NCMQSPIRPGQLLPANRNTPSPIDPDTIQVPVGYEPDPADLALSSIPGQEMFDPRKRKFS 116
Query: 238 DEELKPQPMVKKSRK 252
+EELKPQPM+KK+RK
Sbjct: 117 EEELKPQPMIKKARK 131
Score = 50 (22.7 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 252 KQNMGLRQEMERLKKENLSLRDKLSKF 278
K+N LRQE+ L+KE ++ L+K+
Sbjct: 177 KENSALRQEVADLRKELGKCKNILAKY 203
>ZFIN|ZDB-GENE-100922-6 [details] [associations]
symbol:dbpb "D site of albumin promoter (albumin
D-box) binding protein b" species:7955 "Danio rerio" [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR004827 Pfam:PF07716
PROSITE:PS50217 SMART:SM00338 ZFIN:ZDB-GENE-100922-6 GO:GO:0043565
GO:GO:0003700 GeneTree:ENSGT00440000039070 EMBL:BX323458
IPI:IPI00501776 Ensembl:ENSDART00000080372
Ensembl:ENSDART00000139102 Uniprot:F1Q4X0
Length = 374
Score = 128 (50.1 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 39/114 (34%), Positives = 51/114 (44%)
Query: 146 TSQTSTGGAPTPAANLTG--GHTTTTLQNVTSTISGRLSPCGS-----SQASVMTKXXXX 198
+S +S A + +L G HT ++ T + G +P GS S +S
Sbjct: 184 SSSSSPTSATASSPSLLGLDMHTPQSMMGSTDCLHG--TPPGSLEPTPSPSSTTCPPLPT 241
Query: 199 XXXXXXXXXLTISPPSPADSTLSFTSSTRDFDPRSRTFSDEELKPQPMVKKSRK 252
L P PAD LS FDPR FSDE+LKPQPM+KK+RK
Sbjct: 242 PPATNCNELLAPFDPDPADVALSSVPGQEAFDPRRHHFSDEDLKPQPMIKKARK 295
Score = 121 (47.7 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 36/125 (28%), Positives = 59/125 (47%)
Query: 109 AFLGPNIWDKTLPYDS---DLKYVDLDEFLSDNGIPVDGNTSQTSTGGAPTPAANLT--- 162
+FLGP +W++TLP D L+Y+DL+EFL++NG+ NTS +++ P+ ++
Sbjct: 111 SFLGPLLWERTLPCDGGLFQLQYMDLEEFLTENGMSSMHNTSNSTSAQIPSQSSQSAVPN 170
Query: 163 -GGHTTTTLQNVTSTISGRLSPCGSSQASVMTKXXXXXXXXXXXXXLTISPPSPADSTLS 221
G T S+ S S SS + + L +PP + T S
Sbjct: 171 QGSQCLPTSPPHCSSSSSPTSATASSPSLLGLDMHTPQSMMGSTDCLHGTPPGSLEPTPS 230
Query: 222 FTSST 226
+S+T
Sbjct: 231 PSSTT 235
Score = 61 (26.5 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 54 AFLGPNIWDKTLPYDSDL 71
+FLGP +W++TLP D L
Sbjct: 111 SFLGPLLWERTLPCDGGL 128
Score = 47 (21.6 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 252 KQNMGLRQEMERLKKENLSLRDKLSKF 278
++N LRQE+ ++KE R+ L+K+
Sbjct: 341 RENAALRQEVADMRKELGRCRNILNKY 367
>UNIPROTKB|Q6R2I2 [details] [associations]
symbol:Dbp "D-binding protein 3" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR004827
Pfam:PF07716 PROSITE:PS50217 SMART:SM00338 RGD:2491 GO:GO:0043565
GO:GO:0003700 HOGENOM:HOG000234383 HOVERGEN:HBG004983
UniGene:Rn.11274 EMBL:AY518349 IPI:IPI00454399 SMR:Q6R2I2
STRING:Q6R2I2 Ensembl:ENSRNOT00000042680 Genevestigator:Q6R2I2
Uniprot:Q6R2I2
Length = 188
Score = 123 (48.4 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 36/108 (33%), Positives = 49/108 (45%)
Query: 157 PAANLTGGHTTTTLQNVTSTISGRLSPCGSSQASVMTKXXXXXXXXXXXXXLTIS-PPSP 215
PA GG L + S + G P AS +T + ++ P P
Sbjct: 18 PAGAPPGGGA---LLGLRSLLQGNSKP--KEPASCLTSRDTPSPVDPDTVEVLMTFEPDP 72
Query: 216 ADSTLSFTSSTRDFDPRSRTFSDEELKPQPMVKKSRKQNMGLRQEMER 263
AD LS FDPR FS+EELKPQP++KK+RK + Q+ E+
Sbjct: 73 ADLALSSIPGHETFDPRRHRFSEEELKPQPIMKKARKVQVPEEQKDEK 120
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.126 0.368 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 283 233 0.00086 113 3 11 23 0.50 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 571 (61 KB)
Total size of DFA: 160 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.38u 0.08s 25.46t Elapsed: 00:00:01
Total cpu time: 25.39u 0.08s 25.47t Elapsed: 00:00:01
Start: Thu Aug 15 13:49:10 2013 End: Thu Aug 15 13:49:11 2013