Query psy17488
Match_columns 1446
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Fri Aug 16 23:48:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17488.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/17488hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1te4a_ a.118.1.16 (A:) MTH187 76.6 0.46 3.4E-05 37.0 1.7 35 226-260 56-90 (111)
2 d1te4a_ a.118.1.16 (A:) MTH187 64.5 2.2 0.00016 32.9 3.2 35 226-260 25-60 (111)
3 d2yvxa1 a.118.26.1 (A:7-131) M 32.7 13 0.00097 30.1 3.1 50 242-291 74-123 (125)
4 d1xm9a1 a.118.1.24 (A:244-700) 31.8 18 0.0013 29.8 3.8 28 223-250 44-71 (457)
5 d1xm9a1 a.118.1.24 (A:244-700) 31.4 9.4 0.00069 31.6 1.9 26 225-250 4-29 (457)
6 d1xqra1 a.118.1.21 (A:87-350) 30.9 11 0.00079 32.4 2.3 37 222-258 185-224 (264)
7 d1q1sc_ a.118.1.1 (C:) Importi 30.4 19 0.0014 31.0 3.9 40 223-262 357-404 (434)
8 d1u0sa_ d.58.24.1 (A:) CheY-bi 30.0 6.9 0.0005 32.1 0.8 35 78-112 8-44 (86)
9 d1tafb_ a.22.1.3 (B:) TAF(II)6 29.1 27 0.0019 28.6 4.3 42 242-283 14-57 (70)
10 d1q1sc_ a.118.1.1 (C:) Importi 25.7 13 0.00098 32.1 2.0 38 223-260 99-138 (434)
11 d1wa5b_ a.118.1.1 (B:) Karyoph 25.5 11 0.00078 34.3 1.3 39 223-261 162-202 (503)
12 d2huec1 a.22.1.1 (C:20-101) Hi 24.2 43 0.0031 26.8 4.7 53 231-283 6-60 (82)
13 d1x2ga1 d.224.1.3 (A:247-337) 21.6 22 0.0016 28.7 2.5 31 240-270 58-90 (91)
14 d2ouxa1 a.118.26.1 (A:6-135) M 21.4 30 0.0022 28.1 3.3 48 241-291 81-128 (130)
15 d1b3ua_ a.118.1.2 (A:) Constan 20.1 33 0.0024 31.2 3.6 27 225-251 521-547 (588)
No 1
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=76.61 E-value=0.46 Score=36.96 Aligned_cols=35 Identities=31% Similarity=0.428 Sum_probs=19.0
Q ss_pred hhhhccccccccchhhHHHHHhccCCHHHHHHHHH
Q psy17488 226 KLLVPLLRCDTTDVRDAVVHALGNINSEALKDLME 260 (1446)
Q Consensus 226 kllvpllrcdttdvrdavvhalgninsealkdlme 260 (1446)
..|+.+|.-+..+||-+++.|||.|....+.++|.
T Consensus 56 ~~L~~~l~d~~~~VR~~a~~aL~~i~~~~~~~~L~ 90 (111)
T d1te4a_ 56 EPLIKLLEDDSGFVRSGAARSLEQIGGERVRAAME 90 (111)
T ss_dssp HHHHHHHHHCCTHHHHHHHHHHHHHCSHHHHHHHH
T ss_pred HHHHhhhccchhHHHHHHHHHHHHhCccchHHHHH
Confidence 34555555555566666666666665544444443
No 2
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=64.47 E-value=2.2 Score=32.87 Aligned_cols=35 Identities=23% Similarity=0.385 Sum_probs=27.0
Q ss_pred hhhhccccccccchhhHHHHHhccCCHHH-HHHHHH
Q psy17488 226 KLLVPLLRCDTTDVRDAVVHALGNINSEA-LKDLME 260 (1446)
Q Consensus 226 kllvpllrcdttdvrdavvhalgninsea-lkdlme 260 (1446)
..|+.+|..+..+||.+++.+||+++... +..|++
T Consensus 25 ~~L~~~l~d~~~~vR~~a~~~L~~~~~~~~~~~L~~ 60 (111)
T d1te4a_ 25 EPLLESLSNEDWRIRGAAAWIIGNFQDERAVEPLIK 60 (111)
T ss_dssp HHHHHGGGCSCHHHHHHHHHHHGGGCSHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHhcchhhhHHHHHh
Confidence 45778888888999999999999998543 443433
No 3
>d2yvxa1 a.118.26.1 (A:7-131) Magnesium transporter MgtE {Thermus thermophilus [TaxId: 274]}
Probab=32.70 E-value=13 Score=30.07 Aligned_cols=50 Identities=16% Similarity=0.223 Sum_probs=36.8
Q ss_pred HHHHHhccCCHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhchhhhccc
Q psy17488 242 AVVHALGNINSEALKDLMEELSVYIREAVDRKTENMRRRRRRDALRLQSY 291 (1446)
Q Consensus 242 avvhalgninsealkdlmeelsvyireavdrktenmrrrrrrdalrlqsy 291 (1446)
.+++.|.++.+..+.||+++|..-.+..+++-..+|-...|.++..|-+|
T Consensus 74 ~~~~~l~~m~~DD~adll~~L~~e~~~~~~~iL~~l~~~~r~~i~~lL~Y 123 (125)
T d2yvxa1 74 RLREILEELSLDDLADALQAVRKEDPAYFQRLKDLLDPRTRAEVEALARY 123 (125)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHTTCHHHHHHHGGGSCHHHHHHHTSSSSS
T ss_pred HHHHHHHHCCchHHHHHHHHCCHHHHHHHHHHHHcCCHHHHHHHHHHcCC
Confidence 46677888999999999999986444445555666766667777777777
No 4
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.81 E-value=18 Score=29.84 Aligned_cols=28 Identities=39% Similarity=0.443 Sum_probs=24.6
Q ss_pred chhhhhhccccccccchhhHHHHHhccC
Q psy17488 223 GLYKLLVPLLRCDTTDVRDAVVHALGNI 250 (1446)
Q Consensus 223 glykllvpllrcdttdvrdavvhalgni 250 (1446)
|....||-||..+..+|+.+++-||+||
T Consensus 44 g~i~~Lv~lL~~~~~~v~~~a~~aL~~L 71 (457)
T d1xm9a1 44 GGICKLVDLLRSPNQNVQQAAAGALRNL 71 (457)
T ss_dssp THHHHHHHHTTSSCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 4456788999999999999999999998
No 5
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.38 E-value=9.4 Score=31.63 Aligned_cols=26 Identities=8% Similarity=-0.024 Sum_probs=23.3
Q ss_pred hhhhhccccccccchhhHHHHHhccC
Q psy17488 225 YKLLVPLLRCDTTDVRDAVVHALGNI 250 (1446)
Q Consensus 225 ykllvpllrcdttdvrdavvhalgni 250 (1446)
-..||-||.++..+|+...+++|+||
T Consensus 4 ip~lv~~L~~~~~~~~~~a~~~l~~l 29 (457)
T d1xm9a1 4 IPKAVQYLSSQDEKYQAIGAYYIQHT 29 (457)
T ss_dssp HHHHHHHHHSSCTHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 34688999999999999999999995
No 6
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.93 E-value=11 Score=32.42 Aligned_cols=37 Identities=22% Similarity=0.435 Sum_probs=29.3
Q ss_pred cchhhhhhccccccccchhhHHHHHhccC---CHHHHHHH
Q psy17488 222 TGLYKLLVPLLRCDTTDVRDAVVHALGNI---NSEALKDL 258 (1446)
Q Consensus 222 tglykllvpllrcdttdvrdavvhalgni---nsealkdl 258 (1446)
.|+...||.||..+..+|+..++.||+|| +.+++.++
T Consensus 185 ~~~v~~L~~lL~~~~~~~~~~a~~aL~~L~~~~~~~~~~~ 224 (264)
T d1xqra1 185 MGMVQQLVALVRTEHSPFHEHVLGALCSLVTDFPQGVREC 224 (264)
T ss_dssp TTHHHHHHHHHTSCCSTHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hhhHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 45678899999999999999999999987 33444443
No 7
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=30.37 E-value=19 Score=31.02 Aligned_cols=40 Identities=30% Similarity=0.512 Sum_probs=29.4
Q ss_pred chhhhhhccccccccchhhHHHHHhccC--------CHHHHHHHHHHH
Q psy17488 223 GLYKLLVPLLRCDTTDVRDAVVHALGNI--------NSEALKDLMEEL 262 (1446)
Q Consensus 223 glykllvpllrcdttdvrdavvhalgni--------nsealkdlmeel 262 (1446)
|+...||-||..+.+++..+++++|.|| +.+.+.++|++.
T Consensus 357 ~~i~~L~~ll~~~d~~~~~~~l~~l~~ll~~~~~~~~~~~~~~~~~~~ 404 (434)
T d1q1sc_ 357 GIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEEC 404 (434)
T ss_dssp TCHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHT
T ss_pred CcHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHc
Confidence 4566788888888888888888888876 345566666653
No 8
>d1u0sa_ d.58.24.1 (A:) CheY-binding domain of CheA {Thermotoga maritima [TaxId: 2336]}
Probab=29.96 E-value=6.9 Score=32.08 Aligned_cols=35 Identities=17% Similarity=0.188 Sum_probs=31.2
Q ss_pred eeecCCCCCCCCCchhhHHHhhhc--Cceeeechhhh
Q psy17488 78 VLNLSPSCSAPDPWGFCLFQFLQK--GRVLTYCPSAV 112 (1446)
Q Consensus 78 vlnlspscsapdpwgfclfqflqk--grvltycpsav 112 (1446)
-+.|.+.|--...=.|.+||.|++ |.|+.-.|++-
T Consensus 8 ~V~l~~dc~lK~vRa~mV~~~Le~~~GeIiks~P~~e 44 (86)
T d1u0sa_ 8 KVILKEGTQLKSARIYLVFHKLEELKCEVVRTIPSVE 44 (86)
T ss_dssp EEECCTTCSSHHHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred EEEECCCCccHHHHHHHHHHHHHhcCCEEEEECCCHH
Confidence 368999999999999999999984 89999999864
No 9
>d1tafb_ a.22.1.3 (B:) TAF(II)62 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=29.06 E-value=27 Score=28.56 Aligned_cols=42 Identities=21% Similarity=0.514 Sum_probs=35.3
Q ss_pred HHHHHh--ccCCHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhh
Q psy17488 242 AVVHAL--GNINSEALKDLMEELSVYIREAVDRKTENMRRRRRR 283 (1446)
Q Consensus 242 avvhal--gninsealkdlmeelsvyireavdrktenmrrrrrr 283 (1446)
+|.-.+ +|++.++++.|.+++.--|++.+.....-||--+|.
T Consensus 14 ~iAeS~Gi~~l~de~a~~LA~DveYRl~eiiQeA~KFMrhskR~ 57 (70)
T d1tafb_ 14 VIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQ 57 (70)
T ss_dssp HHHHHTTCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 344444 479999999999999999999999999999887664
No 10
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.67 E-value=13 Score=32.08 Aligned_cols=38 Identities=32% Similarity=0.547 Sum_probs=29.3
Q ss_pred chhhhhhccccccccchhhHHHHHhccC--CHHHHHHHHH
Q psy17488 223 GLYKLLVPLLRCDTTDVRDAVVHALGNI--NSEALKDLME 260 (1446)
Q Consensus 223 glykllvpllrcdttdvrdavvhalgni--nsealkdlme 260 (1446)
|.-..|+.+|..+..+|+..++.||+|| +.+.+++++-
T Consensus 99 ~~i~~l~~~L~~~~~~~~~~a~~~L~nl~~~~~~~~~~i~ 138 (434)
T d1q1sc_ 99 GAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVI 138 (434)
T ss_dssp THHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cchhhhhhccccCCHHHHHHHHHHHHHHhccchHHHHHHH
Confidence 4556788899999999999999999998 3445555443
No 11
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.48 E-value=11 Score=34.33 Aligned_cols=39 Identities=26% Similarity=0.483 Sum_probs=30.8
Q ss_pred chhhhhhccccccccchhhHHHHHhccCC--HHHHHHHHHH
Q psy17488 223 GLYKLLVPLLRCDTTDVRDAVVHALGNIN--SEALKDLMEE 261 (1446)
Q Consensus 223 glykllvpllrcdttdvrdavvhalgnin--sealkdlmee 261 (1446)
|+..+|+.+|..+..+|+..+++|||||- ...++++|-+
T Consensus 162 g~i~~l~~lL~s~~~~i~~~a~~~L~nia~~~~~~r~~l~~ 202 (503)
T d1wa5b_ 162 DAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQ 202 (503)
T ss_dssp TCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CChHHHHHHhcCCChhHHHHHHHHHHHHhhhhHHHHHHHHh
Confidence 56678899999888999999999999974 3456665543
No 12
>d2huec1 a.22.1.1 (C:20-101) Histone H4 {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=24.24 E-value=43 Score=26.80 Aligned_cols=53 Identities=11% Similarity=0.164 Sum_probs=36.4
Q ss_pred cccccccchhhHHHHHhc--cCCHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhh
Q psy17488 231 LLRCDTTDVRDAVVHALG--NINSEALKDLMEELSVYIREAVDRKTENMRRRRRR 283 (1446)
Q Consensus 231 llrcdttdvrdavvhalg--ninsealkdlmeelsvyireavdrktenmrrrrrr 283 (1446)
-|.|=|-+.-..+.+-.| +|..++...|.+.|..+|++.+..-..-|..-.|.
T Consensus 6 ~i~gI~k~~i~Riar~~Gv~ris~d~~~~l~~~l~~~l~~i~~~a~~~~~hakRK 60 (82)
T d2huec1 6 NIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRK 60 (82)
T ss_dssp GCCSSCHHHHHHHHHHTTCCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred hhcCcCHHHHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 333333333333445445 57889999999999999999998888888766553
No 13
>d1x2ga1 d.224.1.3 (A:247-337) Two-domain LplA, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=21.64 E-value=22 Score=28.74 Aligned_cols=31 Identities=19% Similarity=0.273 Sum_probs=22.9
Q ss_pred hhHHHHHhccCCHH--HHHHHHHHHHHHHHHHh
Q psy17488 240 RDAVVHALGNINSE--ALKDLMEELSVYIREAV 270 (1446)
Q Consensus 240 rdavvhalgninse--alkdlmeelsvyireav 270 (1446)
.++|..+|..+|.+ .+++.|+||+-+|.+++
T Consensus 58 ~~~i~~~l~~~~~~~~~~~~~l~e~~~WL~~~i 90 (91)
T d1x2ga1 58 ADMLQQECEALLVDFPEQEKELRELSAWMAGAV 90 (91)
T ss_dssp HHHHHHHHHHTGGGCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCHhHHHHHHHHHHHHHHHh
Confidence 45666666666664 77888889999988876
No 14
>d2ouxa1 a.118.26.1 (A:6-135) Magnesium transporter MgtE {Enterococcus faecalis [TaxId: 1351]}
Probab=21.40 E-value=30 Score=28.11 Aligned_cols=48 Identities=13% Similarity=0.169 Sum_probs=37.7
Q ss_pred hHHHHHhccCCHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhchhhhccc
Q psy17488 241 DAVVHALGNINSEALKDLMEELSVYIREAVDRKTENMRRRRRRDALRLQSY 291 (1446)
Q Consensus 241 davvhalgninsealkdlmeelsvyireavdrktenmrrrrrrdalrlqsy 291 (1446)
+.+++.|.++.+..+.||+++|..-++.+| ..+|-...|.++..|-+|
T Consensus 81 ~~~a~il~~m~~DDaadll~~L~~~~~~~i---L~~l~~~~r~~i~~lL~Y 128 (130)
T d2ouxa1 81 SYAADMLAEMYTDNAVDLLNMLDKSQKAKY---LSLLSSEEAGEIKELLHY 128 (130)
T ss_dssp HHHHHHHTTSCHHHHHHHHHHSCHHHHHHH---HHTSCHHHHHHHHHHTTS
T ss_pred HHHHHHHHHcChHHHHHHHHHCCHHHHHHH---HHcCCHHHHHHHHHHcCC
Confidence 567889999999999999999988776665 456766666677666666
No 15
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.12 E-value=33 Score=31.21 Aligned_cols=27 Identities=19% Similarity=0.212 Sum_probs=18.4
Q ss_pred hhhhhccccccccchhhHHHHHhccCC
Q psy17488 225 YKLLVPLLRCDTTDVRDAVVHALGNIN 251 (1446)
Q Consensus 225 ykllvpllrcdttdvrdavvhalgnin 251 (1446)
+-.|+.++.-....||-+++++|++|-
T Consensus 521 lp~ll~~~~D~v~nVR~~a~~~l~~i~ 547 (588)
T d1b3ua_ 521 LPTVLRMAGDPVANVRFNVAKSLQKIG 547 (588)
T ss_dssp HHHHHHGGGCSCHHHHHHHHHHHHHHG
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 334455555445679999999998863
Done!