Query psy17489
Match_columns 177
No_of_seqs 114 out of 1132
Neff 9.3
Searched_HMMs 46136
Date Fri Aug 16 23:48:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17489.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/17489hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02996 fatty acyl-CoA reduct 99.9 5.1E-21 1.1E-25 159.3 15.0 149 29-177 4-159 (491)
2 PLN02503 fatty acyl-CoA reduct 99.9 1.4E-20 3.1E-25 158.7 15.7 147 31-177 114-266 (605)
3 KOG1502|consensus 99.8 1.9E-20 4.2E-25 145.9 12.1 121 35-177 5-127 (327)
4 PF07993 NAD_binding_4: Male s 99.8 7.3E-21 1.6E-25 145.7 6.0 132 41-177 1-133 (249)
5 KOG1221|consensus 99.8 2.2E-19 4.7E-24 145.9 12.9 148 30-177 6-153 (467)
6 PF01073 3Beta_HSD: 3-beta hyd 99.8 5.5E-19 1.2E-23 137.6 10.4 112 40-177 1-114 (280)
7 COG3320 Putative dehydrogenase 99.8 9.4E-19 2E-23 137.8 10.9 132 37-177 1-133 (382)
8 COG1086 Predicted nucleoside-d 99.8 1.2E-18 2.6E-23 143.0 9.9 140 15-177 229-374 (588)
9 PRK15181 Vi polysaccharide bio 99.8 2.5E-17 5.5E-22 131.8 13.6 124 34-177 13-139 (348)
10 COG1087 GalE UDP-glucose 4-epi 99.7 1.3E-17 2.8E-22 127.8 10.0 110 37-176 1-115 (329)
11 PLN02662 cinnamyl-alcohol dehy 99.7 5E-17 1.1E-21 128.4 13.4 121 35-177 3-125 (322)
12 PLN02986 cinnamyl-alcohol dehy 99.7 5.2E-17 1.1E-21 128.5 13.2 121 35-177 4-126 (322)
13 PLN02214 cinnamoyl-CoA reducta 99.7 6.7E-17 1.5E-21 129.2 13.5 119 33-177 7-125 (342)
14 PLN00198 anthocyanidin reducta 99.7 1.1E-16 2.3E-21 127.6 13.2 120 35-177 8-129 (338)
15 PLN02572 UDP-sulfoquinovose sy 99.7 5.1E-16 1.1E-20 128.0 16.3 125 31-177 42-189 (442)
16 PLN02650 dihydroflavonol-4-red 99.7 2.1E-16 4.6E-21 126.5 12.7 121 35-177 4-126 (351)
17 PF02719 Polysacc_synt_2: Poly 99.7 1.8E-17 3.9E-22 128.1 5.8 117 39-177 1-126 (293)
18 TIGR03589 PseB UDP-N-acetylglu 99.7 3.5E-16 7.6E-21 124.2 13.0 119 34-177 2-123 (324)
19 PLN02989 cinnamyl-alcohol dehy 99.7 4.9E-16 1.1E-20 123.0 13.7 121 35-177 4-127 (325)
20 TIGR01746 Thioester-redct thio 99.7 4.8E-16 1E-20 124.1 13.0 134 38-177 1-134 (367)
21 CHL00194 ycf39 Ycf39; Provisio 99.7 4.8E-16 1E-20 123.0 11.5 108 37-177 1-108 (317)
22 PLN02427 UDP-apiose/xylose syn 99.7 7.6E-16 1.7E-20 124.9 12.7 120 34-177 12-134 (386)
23 COG1088 RfbB dTDP-D-glucose 4, 99.7 5.2E-16 1.1E-20 118.7 10.8 118 37-177 1-124 (340)
24 PLN02583 cinnamoyl-CoA reducta 99.7 1.9E-15 4E-20 118.6 13.3 120 36-177 6-126 (297)
25 PRK11908 NAD-dependent epimera 99.7 1.4E-15 3E-20 121.6 12.3 111 37-177 2-116 (347)
26 PLN02896 cinnamyl-alcohol dehy 99.7 1.8E-15 3.9E-20 121.3 12.8 119 34-177 8-136 (353)
27 TIGR02622 CDP_4_6_dhtase CDP-g 99.7 2.8E-15 6.1E-20 120.0 13.4 119 34-177 2-125 (349)
28 PLN03209 translocon at the inn 99.7 3.3E-15 7.2E-20 124.8 14.2 131 31-177 75-206 (576)
29 KOG1371|consensus 99.6 1.9E-15 4.1E-20 116.9 10.6 119 36-177 2-126 (343)
30 TIGR01472 gmd GDP-mannose 4,6- 99.6 4.3E-15 9.3E-20 118.6 13.1 122 37-177 1-130 (343)
31 PLN02695 GDP-D-mannose-3',5'-e 99.6 3.3E-15 7.1E-20 120.7 12.2 112 35-177 20-135 (370)
32 PRK07201 short chain dehydroge 99.6 2.3E-15 4.9E-20 129.5 11.4 121 37-177 1-123 (657)
33 PLN02653 GDP-mannose 4,6-dehyd 99.6 5.7E-15 1.2E-19 117.8 13.0 124 34-177 4-137 (340)
34 PRK06128 oxidoreductase; Provi 99.6 3.2E-14 6.9E-19 111.7 16.6 123 33-177 52-190 (300)
35 PLN02240 UDP-glucose 4-epimera 99.6 1.1E-14 2.4E-19 116.4 13.6 123 33-177 2-130 (352)
36 PRK08125 bifunctional UDP-gluc 99.6 5.3E-15 1.1E-19 127.5 12.5 114 34-177 313-430 (660)
37 PLN02260 probable rhamnose bio 99.6 9.4E-15 2E-19 126.1 13.8 123 33-177 3-130 (668)
38 PRK10217 dTDP-glucose 4,6-dehy 99.6 1.2E-14 2.5E-19 116.5 12.4 118 37-177 2-132 (355)
39 PLN02686 cinnamoyl-CoA reducta 99.6 1.2E-14 2.5E-19 117.4 12.2 126 33-177 50-178 (367)
40 PLN02206 UDP-glucuronate decar 99.6 1.4E-14 3.1E-19 119.4 12.0 111 35-177 118-231 (442)
41 PLN02657 3,8-divinyl protochlo 99.6 1.1E-14 2.5E-19 118.3 11.3 120 33-177 57-180 (390)
42 COG0451 WcaG Nucleoside-diphos 99.6 1.4E-14 3E-19 113.7 11.4 107 38-176 2-113 (314)
43 PRK10675 UDP-galactose-4-epime 99.6 4.1E-14 8.9E-19 112.5 13.7 117 37-177 1-122 (338)
44 PRK09987 dTDP-4-dehydrorhamnos 99.6 1.3E-14 2.8E-19 114.0 9.9 97 37-177 1-102 (299)
45 TIGR03466 HpnA hopanoid-associ 99.6 3E-14 6.6E-19 112.5 11.9 110 37-177 1-111 (328)
46 PRK13394 3-hydroxybutyrate deh 99.6 5.1E-14 1.1E-18 107.9 12.6 119 34-177 5-142 (262)
47 PLN02166 dTDP-glucose 4,6-dehy 99.6 3E-14 6.5E-19 117.3 11.9 111 35-177 119-232 (436)
48 PRK06482 short chain dehydroge 99.6 7.7E-14 1.7E-18 108.1 13.4 114 36-177 2-133 (276)
49 PRK10084 dTDP-glucose 4,6 dehy 99.6 3.8E-14 8.1E-19 113.4 11.7 118 37-177 1-131 (352)
50 PRK06180 short chain dehydroge 99.6 1.1E-13 2.3E-18 107.5 13.8 116 35-177 3-135 (277)
51 PRK06398 aldose dehydrogenase; 99.6 1E-13 2.2E-18 106.6 13.2 109 34-177 4-129 (258)
52 PRK06182 short chain dehydroge 99.6 1.2E-13 2.7E-18 106.8 13.4 112 35-177 2-131 (273)
53 PF01370 Epimerase: NAD depend 99.6 2.3E-14 5E-19 108.0 9.1 109 39-177 1-114 (236)
54 PRK05717 oxidoreductase; Valid 99.6 1.9E-13 4.1E-18 104.7 14.2 110 31-167 5-130 (255)
55 COG0300 DltE Short-chain dehyd 99.6 1.5E-13 3.2E-18 105.2 13.4 112 33-167 3-128 (265)
56 PRK12826 3-ketoacyl-(acyl-carr 99.5 1.7E-13 3.6E-18 104.3 13.7 120 33-177 3-140 (251)
57 PRK07523 gluconate 5-dehydroge 99.5 1.6E-13 3.4E-18 105.1 13.2 120 34-177 8-144 (255)
58 PRK12429 3-hydroxybutyrate deh 99.5 1.3E-13 2.8E-18 105.4 12.5 119 34-177 2-138 (258)
59 PRK06194 hypothetical protein; 99.5 1.9E-13 4.2E-18 106.3 13.5 108 34-165 4-125 (287)
60 PRK06179 short chain dehydroge 99.5 1E-13 2.2E-18 107.0 11.8 110 35-177 3-130 (270)
61 PRK07985 oxidoreductase; Provi 99.5 6.2E-13 1.3E-17 104.2 16.3 123 33-177 46-184 (294)
62 TIGR03443 alpha_am_amid L-amin 99.5 1.4E-13 2.9E-18 127.1 14.3 137 35-177 970-1107(1389)
63 COG4221 Short-chain alcohol de 99.5 2.8E-13 6.2E-18 101.5 13.3 108 34-167 4-125 (246)
64 PRK05993 short chain dehydroge 99.5 2.6E-13 5.7E-18 105.3 13.7 112 35-177 3-133 (277)
65 KOG1430|consensus 99.5 4.2E-14 9.1E-19 112.4 9.2 120 34-177 2-124 (361)
66 PRK07453 protochlorophyllide o 99.5 3E-13 6.4E-18 107.2 13.6 120 34-177 4-143 (322)
67 PRK07774 short chain dehydroge 99.5 3.1E-13 6.8E-18 102.9 13.1 120 34-177 4-143 (250)
68 PRK07814 short chain dehydroge 99.5 3.3E-13 7.2E-18 103.9 13.3 120 34-177 8-145 (263)
69 PLN02253 xanthoxin dehydrogena 99.5 3E-13 6.6E-18 104.9 13.1 110 33-167 15-140 (280)
70 PRK08263 short chain dehydroge 99.5 4.5E-13 9.7E-18 103.8 14.0 115 35-177 2-134 (275)
71 PRK07063 short chain dehydroge 99.5 4.5E-13 9.7E-18 102.9 13.8 123 33-177 4-143 (260)
72 PRK06935 2-deoxy-D-gluconate 3 99.5 2.7E-13 5.8E-18 104.1 12.5 120 33-177 12-148 (258)
73 PRK12823 benD 1,6-dihydroxycyc 99.5 2.6E-13 5.7E-18 104.1 12.5 119 33-177 5-142 (260)
74 PRK07666 fabG 3-ketoacyl-(acyl 99.5 3.4E-13 7.3E-18 102.2 12.9 120 34-177 5-141 (239)
75 KOG1205|consensus 99.5 1.3E-13 2.9E-18 106.2 10.6 112 33-167 9-135 (282)
76 PRK12827 short chain dehydroge 99.5 6.4E-13 1.4E-17 100.9 14.3 123 34-177 4-145 (249)
77 TIGR03206 benzo_BadH 2-hydroxy 99.5 3.3E-13 7.1E-18 102.8 12.6 119 34-177 1-137 (250)
78 PRK06197 short chain dehydroge 99.5 2.3E-13 5E-18 107.1 12.0 122 33-177 13-150 (306)
79 PRK08213 gluconate 5-dehydroge 99.5 3.6E-13 7.7E-18 103.3 12.5 120 34-177 10-147 (259)
80 PRK05866 short chain dehydroge 99.5 5.2E-13 1.1E-17 104.7 13.4 120 33-177 37-176 (293)
81 TIGR01963 PHB_DH 3-hydroxybuty 99.5 2.9E-13 6.2E-18 103.3 11.7 117 36-177 1-135 (255)
82 PRK06138 short chain dehydroge 99.5 5E-13 1.1E-17 101.9 12.6 118 34-177 3-138 (252)
83 TIGR01181 dTDP_gluc_dehyt dTDP 99.5 4.2E-13 9.1E-18 105.3 12.5 117 38-177 1-123 (317)
84 PRK06196 oxidoreductase; Provi 99.5 4.8E-13 1E-17 105.8 12.8 116 33-177 23-154 (315)
85 PRK05865 hypothetical protein; 99.5 2.2E-13 4.7E-18 119.0 11.7 101 37-177 1-101 (854)
86 PRK07478 short chain dehydroge 99.5 8.9E-13 1.9E-17 100.9 13.8 119 34-177 4-141 (254)
87 PRK12746 short chain dehydroge 99.5 8.4E-13 1.8E-17 100.9 13.5 120 34-177 4-145 (254)
88 PRK06841 short chain dehydroge 99.5 3.9E-13 8.4E-18 102.8 11.6 117 34-177 13-146 (255)
89 PRK08628 short chain dehydroge 99.5 7.3E-13 1.6E-17 101.5 13.0 120 33-177 4-138 (258)
90 PRK06701 short chain dehydroge 99.5 1.8E-12 3.8E-17 101.5 15.3 123 32-177 42-180 (290)
91 PRK05876 short chain dehydroge 99.5 8.5E-13 1.9E-17 102.5 13.4 120 34-177 4-141 (275)
92 PRK05653 fabG 3-ketoacyl-(acyl 99.5 7.2E-13 1.6E-17 100.3 12.8 119 34-177 3-139 (246)
93 PRK08267 short chain dehydroge 99.5 4.2E-13 9E-18 103.0 11.5 116 36-177 1-134 (260)
94 PLN02778 3,5-epimerase/4-reduc 99.5 2.7E-13 5.9E-18 106.5 10.6 92 36-176 9-108 (298)
95 PRK07231 fabG 3-ketoacyl-(acyl 99.5 6.1E-13 1.3E-17 101.2 12.2 118 34-177 3-139 (251)
96 PRK12939 short chain dehydroge 99.5 8.1E-13 1.7E-17 100.5 12.8 120 34-177 5-141 (250)
97 PRK08226 short chain dehydroge 99.5 6.4E-13 1.4E-17 102.1 12.3 119 34-177 4-139 (263)
98 PRK07775 short chain dehydroge 99.5 1.3E-12 2.9E-17 101.2 14.2 121 33-177 7-144 (274)
99 PRK06523 short chain dehydroge 99.5 9.6E-13 2.1E-17 100.9 13.1 112 32-177 5-136 (260)
100 PRK07067 sorbitol dehydrogenas 99.5 8E-13 1.7E-17 101.3 12.6 107 34-167 4-124 (257)
101 PRK10538 malonic semialdehyde 99.5 1.3E-12 2.7E-17 99.8 13.6 113 37-177 1-132 (248)
102 PRK07890 short chain dehydroge 99.5 5.9E-13 1.3E-17 101.9 11.8 120 34-177 3-139 (258)
103 PRK12825 fabG 3-ketoacyl-(acyl 99.5 1.3E-12 2.8E-17 99.0 13.4 120 34-177 4-141 (249)
104 PRK06914 short chain dehydroge 99.5 5.3E-13 1.2E-17 103.5 11.5 120 35-177 2-138 (280)
105 PRK08265 short chain dehydroge 99.5 1.7E-12 3.7E-17 99.9 14.2 116 34-176 4-134 (261)
106 PRK12935 acetoacetyl-CoA reduc 99.5 1.2E-12 2.7E-17 99.6 13.1 121 34-177 4-141 (247)
107 PRK06114 short chain dehydroge 99.5 1.5E-12 3.3E-17 99.7 13.6 121 34-177 6-143 (254)
108 PRK09291 short chain dehydroge 99.5 9.6E-13 2.1E-17 100.7 12.5 117 36-177 2-130 (257)
109 TIGR01832 kduD 2-deoxy-D-gluco 99.5 1.6E-12 3.4E-17 99.0 13.6 118 34-177 3-138 (248)
110 PRK05854 short chain dehydroge 99.5 8.6E-13 1.9E-17 104.3 12.4 122 34-177 12-148 (313)
111 PRK12828 short chain dehydroge 99.5 1.6E-12 3.4E-17 98.1 13.4 117 34-177 5-139 (239)
112 PRK07856 short chain dehydroge 99.5 8.7E-13 1.9E-17 100.8 12.0 112 34-177 4-133 (252)
113 PRK09135 pteridine reductase; 99.5 6.6E-13 1.4E-17 100.9 11.3 112 34-167 4-129 (249)
114 PRK12936 3-ketoacyl-(acyl-carr 99.5 1.5E-12 3.3E-17 98.7 13.3 117 34-177 4-137 (245)
115 PRK08085 gluconate 5-dehydroge 99.5 1.4E-12 3.1E-17 99.7 13.2 120 34-177 7-143 (254)
116 PRK12367 short chain dehydroge 99.5 7.9E-13 1.7E-17 101.2 11.7 106 33-167 11-120 (245)
117 PRK06500 short chain dehydroge 99.5 2E-12 4.2E-17 98.4 13.9 107 34-167 4-124 (249)
118 PRK08589 short chain dehydroge 99.5 5E-13 1.1E-17 103.5 10.7 119 34-177 4-139 (272)
119 PF13460 NAD_binding_10: NADH( 99.5 7.6E-13 1.6E-17 96.5 11.0 96 39-177 1-96 (183)
120 PRK05867 short chain dehydroge 99.5 6.1E-13 1.3E-17 101.8 10.9 110 34-167 7-130 (253)
121 PRK09186 flagellin modificatio 99.5 1.6E-12 3.5E-17 99.4 13.2 121 34-177 2-143 (256)
122 PRK08339 short chain dehydroge 99.5 1.8E-12 3.9E-17 100.0 13.4 121 34-177 6-142 (263)
123 PRK12745 3-ketoacyl-(acyl-carr 99.5 1.9E-12 4.1E-17 99.0 13.4 109 36-167 2-126 (256)
124 PRK08063 enoyl-(acyl carrier p 99.5 6.6E-13 1.4E-17 101.1 10.7 120 34-177 2-139 (250)
125 PRK07024 short chain dehydroge 99.5 1.6E-12 3.5E-17 99.7 12.9 116 36-177 2-136 (257)
126 PRK08277 D-mannonate oxidoredu 99.5 2.2E-12 4.8E-17 100.0 13.7 121 33-177 7-159 (278)
127 PRK12481 2-deoxy-D-gluconate 3 99.5 1.2E-12 2.7E-17 100.1 12.1 118 34-177 6-141 (251)
128 PRK07825 short chain dehydroge 99.5 2.1E-12 4.6E-17 99.8 13.6 115 34-177 3-135 (273)
129 PRK06463 fabG 3-ketoacyl-(acyl 99.5 2.7E-12 5.8E-17 98.3 14.0 114 34-177 5-136 (255)
130 PRK05557 fabG 3-ketoacyl-(acyl 99.5 2.7E-12 5.8E-17 97.3 13.7 121 34-177 3-140 (248)
131 PRK07806 short chain dehydroge 99.5 6E-13 1.3E-17 101.3 10.1 121 34-177 4-133 (248)
132 PRK08643 acetoin reductase; Va 99.5 2.1E-12 4.7E-17 98.8 13.3 108 36-167 2-123 (256)
133 PRK06171 sorbitol-6-phosphate 99.5 2E-12 4.3E-17 99.6 13.1 112 33-177 6-143 (266)
134 PRK08278 short chain dehydroge 99.5 3.2E-12 6.9E-17 99.1 14.1 116 34-167 4-134 (273)
135 PLN00141 Tic62-NAD(P)-related 99.5 6.3E-13 1.4E-17 101.8 10.0 115 34-177 15-130 (251)
136 PRK06139 short chain dehydroge 99.4 2.4E-12 5.1E-17 102.6 13.5 109 34-166 5-127 (330)
137 PRK09134 short chain dehydroge 99.4 3.4E-12 7.5E-17 97.9 14.0 112 34-168 7-132 (258)
138 PRK07326 short chain dehydroge 99.4 1.7E-12 3.6E-17 98.2 12.0 119 34-177 4-138 (237)
139 PRK06124 gluconate 5-dehydroge 99.4 3E-12 6.5E-17 98.0 13.6 119 34-177 9-145 (256)
140 PRK05650 short chain dehydroge 99.4 2.6E-12 5.7E-17 99.2 13.3 116 37-177 1-134 (270)
141 PRK07097 gluconate 5-dehydroge 99.4 2.6E-12 5.6E-17 99.0 13.1 119 34-177 8-144 (265)
142 PRK12937 short chain dehydroge 99.4 2.8E-12 6E-17 97.4 13.1 121 34-177 3-138 (245)
143 PLN02725 GDP-4-keto-6-deoxyman 99.4 3.8E-13 8.2E-18 105.4 8.5 93 40-177 1-99 (306)
144 PRK05693 short chain dehydroge 99.4 3E-12 6.4E-17 99.1 13.4 102 36-167 1-116 (274)
145 PRK12747 short chain dehydroge 99.4 2.9E-12 6.3E-17 97.9 13.2 121 34-177 2-143 (252)
146 PRK06172 short chain dehydroge 99.4 2.2E-12 4.8E-17 98.5 12.5 119 34-177 5-142 (253)
147 PRK07454 short chain dehydroge 99.4 1.5E-12 3.2E-17 98.9 11.4 119 35-177 5-140 (241)
148 PRK12320 hypothetical protein; 99.4 1E-12 2.2E-17 112.7 11.4 100 37-177 1-100 (699)
149 PF00106 adh_short: short chai 99.4 1.2E-12 2.5E-17 93.9 10.1 118 37-176 1-132 (167)
150 PRK08251 short chain dehydroge 99.4 5.4E-12 1.2E-16 96.1 14.3 119 36-177 2-138 (248)
151 PRK12938 acetyacetyl-CoA reduc 99.4 4.5E-12 9.6E-17 96.4 13.8 120 35-177 2-138 (246)
152 PRK12743 oxidoreductase; Provi 99.4 3.4E-12 7.4E-17 97.8 13.2 119 36-177 2-138 (256)
153 PRK12829 short chain dehydroge 99.4 2.8E-12 6.1E-17 98.4 12.7 108 33-166 8-130 (264)
154 PRK07035 short chain dehydroge 99.4 4.3E-12 9.3E-17 96.9 13.6 119 34-177 6-143 (252)
155 PRK07109 short chain dehydroge 99.4 3.9E-12 8.5E-17 101.5 13.9 120 33-177 5-142 (334)
156 PRK06079 enoyl-(acyl carrier p 99.4 2.6E-12 5.7E-17 98.4 12.4 110 31-167 2-131 (252)
157 PRK07102 short chain dehydroge 99.4 3E-12 6.4E-17 97.3 12.5 119 36-177 1-133 (243)
158 PRK06113 7-alpha-hydroxysteroi 99.4 3.3E-12 7.1E-17 97.8 12.8 120 34-177 9-144 (255)
159 PRK07677 short chain dehydroge 99.4 2.8E-12 6E-17 98.1 12.4 108 36-167 1-122 (252)
160 PRK07577 short chain dehydroge 99.4 3.9E-12 8.5E-17 96.0 12.9 107 35-177 2-125 (234)
161 PRK06057 short chain dehydroge 99.4 4.4E-12 9.6E-17 97.1 13.3 114 33-176 4-137 (255)
162 PRK12824 acetoacetyl-CoA reduc 99.4 3.6E-12 7.8E-17 96.7 12.6 117 37-177 3-137 (245)
163 PRK08264 short chain dehydroge 99.4 4.4E-12 9.6E-17 96.0 13.1 114 34-177 4-131 (238)
164 PRK08642 fabG 3-ketoacyl-(acyl 99.4 4.4E-12 9.6E-17 96.7 13.1 118 34-177 3-144 (253)
165 PRK07060 short chain dehydroge 99.4 3.4E-12 7.3E-17 96.9 12.3 115 34-177 7-135 (245)
166 PRK05565 fabG 3-ketoacyl-(acyl 99.4 3.1E-12 6.8E-17 97.0 12.0 120 34-177 3-140 (247)
167 PRK05875 short chain dehydroge 99.4 2.2E-12 4.7E-17 99.9 11.2 122 34-177 5-144 (276)
168 PRK06181 short chain dehydroge 99.4 5E-12 1.1E-16 97.1 13.2 117 36-176 1-134 (263)
169 PRK07424 bifunctional sterol d 99.4 5.4E-12 1.2E-16 102.8 13.9 107 34-167 176-286 (406)
170 PRK11150 rfaD ADP-L-glycero-D- 99.4 6.7E-13 1.5E-17 104.4 8.5 106 39-177 2-114 (308)
171 PRK07062 short chain dehydroge 99.4 5.1E-12 1.1E-16 97.2 13.0 123 33-177 5-144 (265)
172 TIGR02197 heptose_epim ADP-L-g 99.4 2E-12 4.3E-17 101.7 10.9 107 39-177 1-112 (314)
173 PRK06101 short chain dehydroge 99.4 5.1E-12 1.1E-16 96.1 12.7 113 36-176 1-125 (240)
174 PRK09242 tropinone reductase; 99.4 7E-12 1.5E-16 96.1 13.5 121 34-177 7-145 (257)
175 PRK08945 putative oxoacyl-(acy 99.4 6.3E-12 1.4E-16 95.8 12.9 128 32-177 8-150 (247)
176 PRK05872 short chain dehydroge 99.4 7.4E-12 1.6E-16 98.2 13.7 119 34-177 7-141 (296)
177 TIGR03325 BphB_TodD cis-2,3-di 99.4 3.9E-12 8.4E-17 97.9 11.8 107 34-167 3-128 (262)
178 PRK09072 short chain dehydroge 99.4 5.3E-12 1.2E-16 97.1 12.6 109 34-167 3-124 (263)
179 PRK08220 2,3-dihydroxybenzoate 99.4 4.7E-12 1E-16 96.5 12.2 111 34-177 6-133 (252)
180 KOG1429|consensus 99.4 2.1E-13 4.6E-18 103.8 4.5 111 34-176 25-138 (350)
181 PRK07576 short chain dehydroge 99.4 5.9E-12 1.3E-16 97.1 12.7 110 34-167 7-130 (264)
182 PRK07791 short chain dehydroge 99.4 8.2E-12 1.8E-16 97.5 13.6 116 33-166 3-135 (286)
183 PRK08993 2-deoxy-D-gluconate 3 99.4 8.6E-12 1.9E-16 95.5 13.4 108 34-167 8-129 (253)
184 TIGR01179 galE UDP-glucose-4-e 99.4 4.1E-12 8.8E-17 100.1 11.8 114 38-177 1-119 (328)
185 PRK12742 oxidoreductase; Provi 99.4 9.5E-12 2.1E-16 94.0 13.4 116 34-177 4-130 (237)
186 smart00822 PKS_KR This enzymat 99.4 8.7E-12 1.9E-16 89.3 12.5 119 37-177 1-134 (180)
187 PRK07792 fabG 3-ketoacyl-(acyl 99.4 1.1E-11 2.5E-16 97.6 14.2 112 32-166 8-132 (306)
188 PRK07904 short chain dehydroge 99.4 6.1E-12 1.3E-16 96.6 12.1 122 34-177 6-144 (253)
189 PRK07074 short chain dehydroge 99.4 6.1E-12 1.3E-16 96.3 12.0 115 36-177 2-134 (257)
190 PRK06200 2,3-dihydroxy-2,3-dih 99.4 4.2E-12 9E-17 97.7 11.0 107 34-167 4-129 (263)
191 PRK12744 short chain dehydroge 99.4 1.3E-11 2.8E-16 94.6 13.6 114 33-167 5-133 (257)
192 TIGR01829 AcAcCoA_reduct aceto 99.4 1.5E-11 3.2E-16 93.1 13.4 117 37-177 1-135 (242)
193 PRK06550 fabG 3-ketoacyl-(acyl 99.4 1.2E-11 2.6E-16 93.4 12.9 112 34-177 3-125 (235)
194 PRK06484 short chain dehydroge 99.4 1.3E-11 2.9E-16 103.6 14.4 118 33-177 266-399 (520)
195 PRK06077 fabG 3-ketoacyl-(acyl 99.4 1.1E-11 2.4E-16 94.4 12.7 121 34-177 4-139 (252)
196 PRK08416 7-alpha-hydroxysteroi 99.4 1.4E-11 3E-16 94.8 13.3 123 33-177 5-150 (260)
197 PRK08415 enoyl-(acyl carrier p 99.4 8.1E-12 1.7E-16 97.1 12.0 118 34-176 3-141 (274)
198 PRK08936 glucose-1-dehydrogena 99.4 2.5E-11 5.3E-16 93.3 14.5 121 33-176 4-142 (261)
199 PRK06123 short chain dehydroge 99.4 1.2E-11 2.6E-16 94.1 12.7 109 36-167 2-125 (248)
200 PRK07023 short chain dehydroge 99.4 3.7E-12 8.1E-17 96.8 9.8 113 36-177 1-135 (243)
201 PRK08219 short chain dehydroge 99.4 1.4E-11 3.1E-16 92.3 12.7 111 36-177 3-127 (227)
202 PRK12384 sorbitol-6-phosphate 99.4 1.3E-11 2.8E-16 94.6 12.4 120 36-177 2-139 (259)
203 PRK07370 enoyl-(acyl carrier p 99.4 1.4E-11 3E-16 94.8 12.5 121 34-176 4-145 (258)
204 PF08659 KR: KR domain; Inter 99.4 1.8E-11 3.9E-16 89.5 12.5 117 38-176 2-133 (181)
205 PRK06949 short chain dehydroge 99.4 1.5E-11 3.2E-16 94.1 12.6 110 33-166 6-129 (258)
206 PRK08159 enoyl-(acyl carrier p 99.4 1.2E-11 2.5E-16 96.0 12.1 113 30-167 4-136 (272)
207 TIGR01777 yfcH conserved hypot 99.4 4.9E-12 1.1E-16 98.3 9.8 99 39-173 1-104 (292)
208 TIGR01214 rmlD dTDP-4-dehydror 99.4 5.3E-12 1.1E-16 98.2 10.0 93 38-177 1-98 (287)
209 PRK12748 3-ketoacyl-(acyl-carr 99.4 3.5E-11 7.7E-16 92.2 14.4 123 34-177 3-152 (256)
210 PRK07533 enoyl-(acyl carrier p 99.4 1.8E-11 3.9E-16 94.1 12.8 109 34-167 8-136 (258)
211 PRK06940 short chain dehydroge 99.4 1.7E-11 3.7E-16 95.2 12.7 106 36-167 2-113 (275)
212 PRK08303 short chain dehydroge 99.4 4.3E-11 9.3E-16 94.4 15.1 114 33-167 5-144 (305)
213 PRK06125 short chain dehydroge 99.4 2.8E-11 6E-16 92.9 13.7 110 34-166 5-124 (259)
214 PRK08261 fabG 3-ketoacyl-(acyl 99.4 1.3E-11 2.7E-16 102.2 12.4 118 33-177 207-341 (450)
215 PRK06505 enoyl-(acyl carrier p 99.4 1.5E-11 3.2E-16 95.4 11.8 110 33-167 4-133 (271)
216 PRK08594 enoyl-(acyl carrier p 99.3 3.6E-11 7.7E-16 92.5 13.8 120 34-176 5-145 (257)
217 PRK06198 short chain dehydroge 99.3 1.9E-11 4.2E-16 93.6 12.3 112 33-167 3-128 (260)
218 PRK08017 oxidoreductase; Provi 99.3 2.1E-11 4.6E-16 93.2 12.2 110 37-177 3-131 (256)
219 PRK05884 short chain dehydroge 99.3 2.3E-11 5.1E-16 91.6 12.3 111 37-176 1-128 (223)
220 TIGR02415 23BDH acetoin reduct 99.3 2E-11 4.4E-16 93.1 12.1 117 37-177 1-135 (254)
221 PRK08703 short chain dehydroge 99.3 3.6E-11 7.7E-16 91.2 13.2 122 34-176 4-144 (239)
222 PRK06953 short chain dehydroge 99.3 4E-11 8.6E-16 90.1 13.2 102 36-167 1-116 (222)
223 PRK06947 glucose-1-dehydrogena 99.3 2.6E-11 5.6E-16 92.3 12.4 108 36-166 2-124 (248)
224 PRK07889 enoyl-(acyl carrier p 99.3 2.9E-11 6.2E-16 93.0 12.6 109 34-167 5-133 (256)
225 TIGR01830 3oxo_ACP_reduc 3-oxo 99.3 2.8E-11 6.1E-16 91.3 12.2 116 39-177 1-133 (239)
226 PRK07201 short chain dehydroge 99.3 2.7E-11 5.8E-16 104.4 13.5 120 33-177 368-507 (657)
227 KOG1201|consensus 99.3 2.2E-11 4.8E-16 93.7 11.3 116 31-165 33-156 (300)
228 PRK12859 3-ketoacyl-(acyl-carr 99.3 9.7E-11 2.1E-15 89.9 15.0 127 33-177 3-153 (256)
229 PRK07069 short chain dehydroge 99.3 4.1E-11 9E-16 91.2 12.7 118 38-177 1-136 (251)
230 COG3967 DltE Short-chain dehyd 99.3 2.8E-11 6E-16 88.5 10.8 107 34-168 3-125 (245)
231 PRK09730 putative NAD(P)-bindi 99.3 4E-11 8.6E-16 91.0 12.3 107 37-167 2-124 (247)
232 PRK06483 dihydromonapterin red 99.3 5.2E-11 1.1E-15 90.1 12.9 103 36-167 2-118 (236)
233 PF04321 RmlD_sub_bind: RmlD s 99.3 7.3E-12 1.6E-16 97.9 8.2 94 37-177 1-99 (286)
234 PRK05855 short chain dehydroge 99.3 3.1E-11 6.8E-16 102.1 12.5 121 33-177 312-450 (582)
235 TIGR01289 LPOR light-dependent 99.3 7.3E-11 1.6E-15 93.4 13.7 120 35-177 2-141 (314)
236 PRK08690 enoyl-(acyl carrier p 99.3 3.8E-11 8.2E-16 92.5 11.7 109 34-167 4-133 (261)
237 PRK07984 enoyl-(acyl carrier p 99.3 4.8E-11 1E-15 92.1 12.1 109 34-167 4-133 (262)
238 PRK06997 enoyl-(acyl carrier p 99.3 5.1E-11 1.1E-15 91.8 12.3 118 34-176 4-143 (260)
239 KOG1208|consensus 99.3 1.7E-11 3.7E-16 96.6 9.6 121 33-177 32-169 (314)
240 PRK06924 short chain dehydroge 99.3 3.1E-11 6.6E-16 92.1 10.7 115 37-177 2-139 (251)
241 TIGR01831 fabG_rel 3-oxoacyl-( 99.3 9.7E-11 2.1E-15 88.7 13.1 115 39-177 1-134 (239)
242 PRK08177 short chain dehydroge 99.3 3E-11 6.5E-16 90.9 10.2 103 36-167 1-117 (225)
243 PRK06484 short chain dehydroge 99.3 8.7E-11 1.9E-15 98.7 14.0 107 34-167 3-125 (520)
244 PRK07041 short chain dehydroge 99.3 4.3E-11 9.4E-16 90.1 10.6 112 40-177 1-122 (230)
245 PRK07832 short chain dehydroge 99.3 8.5E-11 1.8E-15 90.9 12.4 118 37-177 1-136 (272)
246 PRK07831 short chain dehydroge 99.3 9.7E-11 2.1E-15 90.0 12.5 114 32-167 13-141 (262)
247 TIGR03649 ergot_EASG ergot alk 99.3 3.4E-11 7.5E-16 93.7 10.0 96 38-177 1-103 (285)
248 PRK09009 C factor cell-cell si 99.3 1.4E-10 3E-15 87.7 13.0 101 37-167 1-117 (235)
249 PLN02780 ketoreductase/ oxidor 99.3 1E-10 2.2E-15 92.9 12.7 126 35-177 52-191 (320)
250 PRK06603 enoyl-(acyl carrier p 99.3 9.2E-11 2E-15 90.3 12.1 110 33-167 5-134 (260)
251 PRK08340 glucose-1-dehydrogena 99.3 1.2E-10 2.5E-15 89.5 12.4 116 37-177 1-136 (259)
252 PRK08324 short chain dehydroge 99.3 1.5E-10 3.3E-15 100.3 14.2 119 33-177 419-556 (681)
253 PLN02260 probable rhamnose bio 99.3 3.8E-11 8.3E-16 103.9 10.2 93 35-176 379-479 (668)
254 PRK08217 fabG 3-ketoacyl-(acyl 99.2 1.6E-10 3.5E-15 87.9 12.2 109 34-166 3-134 (253)
255 TIGR02632 RhaD_aldol-ADH rhamn 99.2 2.9E-10 6.2E-15 98.5 15.0 123 33-177 411-551 (676)
256 KOG4169|consensus 99.2 2.7E-11 5.9E-16 89.8 7.3 109 34-166 3-118 (261)
257 KOG0747|consensus 99.2 9.3E-12 2E-16 94.9 4.9 119 37-177 7-130 (331)
258 PRK05786 fabG 3-ketoacyl-(acyl 99.2 1.7E-10 3.8E-15 87.1 11.2 109 34-167 3-123 (238)
259 PRK08862 short chain dehydroge 99.2 3.9E-10 8.4E-15 85.3 12.9 109 34-166 3-127 (227)
260 KOG2865|consensus 99.2 6.4E-11 1.4E-15 90.6 8.4 116 35-177 60-175 (391)
261 COG1091 RfbD dTDP-4-dehydrorha 99.2 9.4E-11 2E-15 90.5 9.3 93 37-177 1-98 (281)
262 KOG0725|consensus 99.2 6.8E-10 1.5E-14 86.1 13.4 115 32-167 4-135 (270)
263 PF05368 NmrA: NmrA-like famil 99.2 1.8E-10 3.9E-15 87.2 9.6 100 39-176 1-100 (233)
264 TIGR02685 pter_reduc_Leis pter 99.2 2.3E-10 5E-15 88.2 10.0 113 37-167 2-139 (267)
265 PRK07578 short chain dehydroge 99.2 5.8E-10 1.3E-14 82.3 11.5 89 37-167 1-99 (199)
266 KOG1611|consensus 99.2 3.4E-10 7.3E-15 84.0 9.9 114 36-165 3-127 (249)
267 PLN00016 RNA-binding protein; 99.2 2.2E-10 4.8E-15 92.8 9.8 110 34-177 50-163 (378)
268 TIGR01500 sepiapter_red sepiap 99.1 7.9E-10 1.7E-14 84.8 11.8 108 38-167 2-134 (256)
269 PLN00015 protochlorophyllide r 99.1 1E-09 2.2E-14 86.6 12.7 115 40-177 1-135 (308)
270 KOG1200|consensus 99.1 3.9E-10 8.6E-15 81.9 8.5 118 31-167 9-134 (256)
271 COG1089 Gmd GDP-D-mannose dehy 99.1 2.1E-10 4.6E-15 87.7 7.2 113 36-168 2-119 (345)
272 PLN02730 enoyl-[acyl-carrier-p 99.1 2.6E-09 5.6E-14 84.2 13.5 127 34-167 7-166 (303)
273 TIGR02813 omega_3_PfaA polyket 99.1 6.5E-10 1.4E-14 106.4 11.7 135 34-177 1995-2174(2582)
274 PRK05599 hypothetical protein; 99.1 3.1E-09 6.6E-14 81.2 12.6 105 37-165 1-119 (246)
275 KOG1207|consensus 99.1 2E-10 4.3E-15 82.1 5.1 110 31-167 2-121 (245)
276 COG1028 FabG Dehydrogenases wi 99.1 6.5E-09 1.4E-13 79.2 13.6 113 33-167 2-131 (251)
277 KOG1610|consensus 99.0 1.3E-08 2.7E-13 79.1 12.0 118 34-177 27-163 (322)
278 PRK06720 hypothetical protein; 98.9 1.9E-08 4.1E-13 72.8 11.0 85 34-142 14-105 (169)
279 KOG1209|consensus 98.9 1.9E-08 4E-13 74.3 8.8 104 35-167 6-125 (289)
280 PTZ00325 malate dehydrogenase; 98.8 5.9E-08 1.3E-12 76.9 11.3 118 33-177 5-123 (321)
281 COG0702 Predicted nucleoside-d 98.8 6.1E-08 1.3E-12 74.6 10.7 104 37-176 1-104 (275)
282 COG1090 Predicted nucleoside-d 98.8 5.8E-08 1.3E-12 74.3 10.0 93 39-168 1-99 (297)
283 PRK06300 enoyl-(acyl carrier p 98.8 1E-07 2.2E-12 75.1 11.7 130 33-167 5-165 (299)
284 KOG1199|consensus 98.7 1.7E-08 3.6E-13 72.3 5.2 107 33-166 6-132 (260)
285 KOG4039|consensus 98.7 3.3E-08 7.1E-13 71.0 6.7 115 33-177 15-129 (238)
286 KOG1210|consensus 98.7 1.3E-07 2.7E-12 73.6 10.2 109 37-167 34-156 (331)
287 PRK08309 short chain dehydroge 98.7 1.3E-07 2.7E-12 69.0 9.2 99 37-177 1-110 (177)
288 COG2910 Putative NADH-flavin r 98.7 1.9E-07 4.2E-12 67.4 9.7 103 37-177 1-103 (211)
289 PLN00106 malate dehydrogenase 98.7 1.7E-07 3.7E-12 74.4 10.3 115 36-177 18-133 (323)
290 PF13561 adh_short_C2: Enoyl-( 98.7 2.5E-07 5.4E-12 70.3 10.1 100 43-167 1-121 (241)
291 cd01336 MDH_cytoplasmic_cytoso 98.6 6.5E-07 1.4E-11 71.3 10.7 109 37-168 3-117 (325)
292 KOG1203|consensus 98.6 2.7E-07 5.8E-12 74.8 8.3 123 30-177 73-199 (411)
293 KOG1014|consensus 98.6 1.8E-07 3.9E-12 72.7 6.7 112 36-166 49-171 (312)
294 KOG1431|consensus 98.6 1.8E-07 3.9E-12 69.8 6.2 98 36-176 1-104 (315)
295 KOG1372|consensus 98.5 6.6E-07 1.4E-11 67.7 8.7 114 37-168 29-147 (376)
296 PRK09620 hypothetical protein; 98.5 3.8E-07 8.3E-12 69.1 7.6 82 34-143 1-100 (229)
297 COG0623 FabI Enoyl-[acyl-carri 98.4 5.2E-06 1.1E-10 62.1 10.4 116 33-167 3-132 (259)
298 PRK13656 trans-2-enoyl-CoA red 98.4 3E-06 6.6E-11 68.4 9.8 86 34-141 39-142 (398)
299 KOG2774|consensus 98.3 2.4E-07 5.1E-12 69.6 2.3 113 32-175 40-156 (366)
300 COG1748 LYS9 Saccharopine dehy 98.3 2.8E-06 6.1E-11 68.7 8.6 79 36-141 1-79 (389)
301 PRK06732 phosphopantothenate-- 98.3 3.4E-06 7.4E-11 64.0 8.5 77 38-143 18-94 (229)
302 KOG1478|consensus 98.3 8.3E-06 1.8E-10 62.0 9.6 120 37-167 4-160 (341)
303 PRK05086 malate dehydrogenase; 98.2 1.4E-05 3E-10 63.4 10.3 114 37-177 1-116 (312)
304 PRK05579 bifunctional phosphop 98.2 5E-06 1.1E-10 67.9 7.8 76 32-142 184-279 (399)
305 PRK12428 3-alpha-hydroxysteroi 98.2 3E-06 6.5E-11 64.5 6.0 90 52-177 1-95 (241)
306 PF03435 Saccharop_dh: Sacchar 98.1 1.3E-05 2.9E-10 65.2 8.6 78 39-141 1-78 (386)
307 PRK14982 acyl-ACP reductase; P 98.1 1.4E-05 3E-10 63.9 8.0 40 33-73 152-191 (340)
308 cd01078 NAD_bind_H4MPT_DH NADP 98.1 1.4E-05 2.9E-10 59.0 7.4 84 33-141 25-108 (194)
309 TIGR01758 MDH_euk_cyt malate d 98.1 3.7E-05 7.9E-10 61.3 10.3 103 38-168 1-114 (324)
310 cd00704 MDH Malate dehydrogena 98.1 4.7E-05 1E-09 60.6 10.4 103 38-168 2-115 (323)
311 PRK12548 shikimate 5-dehydroge 98.1 2.6E-05 5.7E-10 61.2 8.8 86 34-141 124-210 (289)
312 KOG2733|consensus 97.9 4.3E-05 9.3E-10 60.7 7.7 89 38-143 7-96 (423)
313 PF00056 Ldh_1_N: lactate/mala 97.9 0.00017 3.7E-09 50.6 9.5 111 37-174 1-113 (141)
314 KOG4288|consensus 97.9 2.3E-05 5E-10 58.8 4.7 108 37-177 53-160 (283)
315 KOG1204|consensus 97.9 0.00019 4.2E-09 53.8 9.5 106 35-167 5-129 (253)
316 TIGR00521 coaBC_dfp phosphopan 97.7 0.00015 3.2E-09 59.2 7.4 101 33-168 182-312 (390)
317 PRK14106 murD UDP-N-acetylmura 97.6 0.00047 1E-08 57.2 9.5 78 34-142 3-80 (450)
318 TIGR00715 precor6x_red precorr 97.6 0.00046 9.9E-09 53.2 8.3 74 37-141 1-76 (256)
319 PRK00066 ldh L-lactate dehydro 97.6 0.0018 4E-08 51.4 11.6 107 34-168 4-112 (315)
320 PF01488 Shikimate_DH: Shikima 97.5 0.0012 2.5E-08 45.9 9.1 79 33-142 9-87 (135)
321 PF04127 DFP: DNA / pantothena 97.5 0.00041 8.8E-09 50.9 6.9 79 34-143 1-95 (185)
322 TIGR01759 MalateDH-SF1 malate 97.5 0.002 4.3E-08 51.4 11.2 110 36-168 3-118 (323)
323 cd05294 LDH-like_MDH_nadp A la 97.5 0.00076 1.6E-08 53.5 8.5 110 37-168 1-111 (309)
324 TIGR02114 coaB_strep phosphopa 97.4 0.00063 1.4E-08 51.6 7.1 31 38-71 17-47 (227)
325 cd01338 MDH_choloroplast_like 97.4 0.0018 3.8E-08 51.7 9.8 110 36-168 2-117 (322)
326 PRK05442 malate dehydrogenase; 97.4 0.0029 6.3E-08 50.5 10.4 108 35-168 3-119 (326)
327 cd01337 MDH_glyoxysomal_mitoch 97.3 0.0053 1.2E-07 48.7 11.5 111 37-174 1-112 (310)
328 PRK14874 aspartate-semialdehyd 97.2 0.00097 2.1E-08 53.4 6.4 38 36-73 1-38 (334)
329 PRK07688 thiamine/molybdopteri 97.1 0.0065 1.4E-07 48.8 10.0 38 32-72 20-57 (339)
330 cd05291 HicDH_like L-2-hydroxy 97.1 0.0097 2.1E-07 47.1 10.8 105 37-168 1-107 (306)
331 PF01118 Semialdhyde_dh: Semia 97.1 0.00082 1.8E-08 45.8 4.0 35 38-73 1-35 (121)
332 COG3268 Uncharacterized conser 97.1 0.0033 7.2E-08 49.8 7.7 78 36-142 6-83 (382)
333 cd05290 LDH_3 A subgroup of L- 97.0 0.011 2.4E-07 46.8 10.4 110 38-174 1-114 (307)
334 TIGR01772 MDH_euk_gproteo mala 97.0 0.01 2.3E-07 47.1 10.2 111 38-175 1-112 (312)
335 COG0039 Mdh Malate/lactate deh 97.0 0.014 3.1E-07 46.2 10.7 111 37-175 1-114 (313)
336 cd05293 LDH_1 A subgroup of L- 96.9 0.021 4.6E-07 45.4 11.1 106 37-168 4-110 (312)
337 PRK09496 trkA potassium transp 96.9 0.0062 1.3E-07 50.5 8.5 73 37-139 1-74 (453)
338 PLN02819 lysine-ketoglutarate 96.9 0.018 3.9E-07 52.6 11.6 79 35-140 568-658 (1042)
339 TIGR02356 adenyl_thiF thiazole 96.8 0.015 3.4E-07 43.2 9.4 38 32-72 17-54 (202)
340 PLN00112 malate dehydrogenase 96.8 0.023 4.9E-07 47.3 11.1 107 35-167 99-214 (444)
341 PTZ00117 malate dehydrogenase; 96.8 0.018 3.8E-07 45.9 10.1 108 35-168 4-112 (319)
342 cd01080 NAD_bind_m-THF_DH_Cycl 96.8 0.0074 1.6E-07 43.6 7.0 39 32-73 40-78 (168)
343 PRK12475 thiamine/molybdopteri 96.7 0.007 1.5E-07 48.6 7.0 96 32-139 20-125 (338)
344 PRK14192 bifunctional 5,10-met 96.7 0.0083 1.8E-07 47.0 7.1 36 33-71 156-191 (283)
345 COG0569 TrkA K+ transport syst 96.6 0.013 2.9E-07 44.3 7.7 75 37-140 1-76 (225)
346 PLN02602 lactate dehydrogenase 96.6 0.054 1.2E-06 43.8 11.4 104 37-168 38-144 (350)
347 cd00650 LDH_MDH_like NAD-depen 96.6 0.035 7.6E-07 42.9 10.0 106 39-168 1-109 (263)
348 PRK05671 aspartate-semialdehyd 96.6 0.011 2.3E-07 47.5 7.3 36 36-71 4-39 (336)
349 TIGR01757 Malate-DH_plant mala 96.6 0.039 8.4E-07 45.1 10.5 109 35-168 43-159 (387)
350 PRK06718 precorrin-2 dehydroge 96.5 0.03 6.5E-07 41.7 8.9 39 30-72 4-42 (202)
351 PRK02472 murD UDP-N-acetylmura 96.5 0.025 5.5E-07 46.9 9.2 36 34-73 3-38 (447)
352 TIGR01296 asd_B aspartate-semi 96.5 0.0059 1.3E-07 49.1 5.3 36 38-73 1-36 (339)
353 cd05292 LDH_2 A subgroup of L- 96.5 0.042 9E-07 43.6 10.0 105 37-168 1-106 (308)
354 PRK14175 bifunctional 5,10-met 96.5 0.015 3.3E-07 45.5 7.3 37 33-72 155-191 (286)
355 PF00899 ThiF: ThiF family; I 96.5 0.13 2.7E-06 35.5 11.3 93 36-140 2-102 (135)
356 PRK08223 hypothetical protein; 96.4 0.043 9.4E-07 43.0 9.5 96 32-139 23-126 (287)
357 PRK06223 malate dehydrogenase; 96.4 0.047 1E-06 43.1 10.0 107 36-168 2-109 (307)
358 PRK08762 molybdopterin biosynt 96.4 0.047 1E-06 44.5 10.2 37 33-72 132-168 (376)
359 cd01065 NAD_bind_Shikimate_DH 96.4 0.019 4.1E-07 40.4 6.9 37 34-73 17-53 (155)
360 cd05295 MDH_like Malate dehydr 96.3 0.067 1.5E-06 44.6 10.7 113 34-168 121-238 (452)
361 PRK05690 molybdopterin biosynt 96.3 0.02 4.3E-07 43.9 7.1 38 32-72 28-65 (245)
362 PF02254 TrkA_N: TrkA-N domain 96.3 0.042 9.1E-07 36.6 7.9 70 39-139 1-71 (116)
363 PLN02968 Probable N-acetyl-gam 96.3 0.0097 2.1E-07 48.6 5.5 37 35-73 37-73 (381)
364 TIGR02354 thiF_fam2 thiamine b 96.3 0.0094 2E-07 44.3 5.0 95 32-138 17-118 (200)
365 TIGR02355 moeB molybdopterin s 96.3 0.044 9.5E-07 41.9 8.8 39 32-73 20-58 (240)
366 PLN02383 aspartate semialdehyd 96.2 0.016 3.5E-07 46.7 6.5 36 36-71 7-42 (344)
367 PRK12749 quinate/shikimate deh 96.2 0.038 8.2E-07 43.4 8.2 38 34-74 122-159 (288)
368 PRK05597 molybdopterin biosynt 96.2 0.075 1.6E-06 43.0 10.1 38 32-72 24-61 (355)
369 PF02882 THF_DHG_CYH_C: Tetrah 96.1 0.033 7.1E-07 39.9 6.9 36 33-71 33-68 (160)
370 PTZ00082 L-lactate dehydrogena 96.1 0.19 4.2E-06 40.1 12.0 109 34-168 4-118 (321)
371 cd01492 Aos1_SUMO Ubiquitin ac 96.1 0.14 3E-06 37.9 10.5 37 33-72 18-54 (197)
372 TIGR02853 spore_dpaA dipicolin 96.1 0.055 1.2E-06 42.5 8.8 37 33-73 148-184 (287)
373 cd00757 ThiF_MoeB_HesA_family 96.1 0.024 5.2E-07 42.9 6.5 38 32-72 17-54 (228)
374 PRK08644 thiamine biosynthesis 96.0 0.027 5.9E-07 42.2 6.6 38 32-72 24-61 (212)
375 KOG1494|consensus 96.0 0.097 2.1E-06 40.8 9.5 102 35-168 27-135 (345)
376 cd01483 E1_enzyme_family Super 96.0 0.09 1.9E-06 36.6 8.8 32 38-72 1-32 (143)
377 PRK09496 trkA potassium transp 96.0 0.064 1.4E-06 44.5 9.2 76 35-139 230-306 (453)
378 PRK13940 glutamyl-tRNA reducta 96.0 0.04 8.7E-07 45.5 7.7 39 32-73 177-215 (414)
379 cd01485 E1-1_like Ubiquitin ac 95.9 0.044 9.5E-07 40.6 7.2 37 33-72 16-52 (198)
380 PRK04148 hypothetical protein; 95.9 0.092 2E-06 36.5 8.3 72 35-140 16-87 (134)
381 PRK05600 thiamine biosynthesis 95.9 0.13 2.8E-06 41.9 10.4 97 32-140 37-141 (370)
382 PRK00048 dihydrodipicolinate r 95.9 0.054 1.2E-06 41.8 7.8 35 37-73 2-37 (257)
383 COG1179 Dinucleotide-utilizing 95.9 0.094 2E-06 40.0 8.6 114 33-171 27-147 (263)
384 PRK08040 putative semialdehyde 95.9 0.031 6.7E-07 44.9 6.5 39 34-72 2-40 (336)
385 PF02826 2-Hacid_dh_C: D-isome 95.8 0.16 3.4E-06 36.9 9.7 40 31-74 31-70 (178)
386 TIGR01763 MalateDH_bact malate 95.8 0.12 2.7E-06 40.9 9.6 106 37-168 2-108 (305)
387 KOG1198|consensus 95.8 0.037 8E-07 44.7 6.6 38 32-71 154-191 (347)
388 PRK15116 sulfur acceptor prote 95.7 0.23 4.9E-06 38.7 10.5 38 32-72 26-63 (268)
389 TIGR01470 cysG_Nterm siroheme 95.7 0.13 2.7E-06 38.4 8.8 37 33-73 6-42 (205)
390 PRK13982 bifunctional SbtC-lik 95.6 0.05 1.1E-06 45.6 7.1 35 33-70 253-303 (475)
391 PRK10792 bifunctional 5,10-met 95.6 0.053 1.2E-06 42.4 6.8 37 33-72 156-192 (285)
392 PRK12549 shikimate 5-dehydroge 95.6 0.1 2.2E-06 41.0 8.3 37 34-73 125-161 (284)
393 PRK00436 argC N-acetyl-gamma-g 95.6 0.055 1.2E-06 43.6 7.0 34 36-71 2-35 (343)
394 PRK14194 bifunctional 5,10-met 95.6 0.048 1.1E-06 43.0 6.4 38 33-73 156-193 (301)
395 PRK07878 molybdopterin biosynt 95.5 0.14 3.1E-06 42.0 9.4 37 33-72 39-75 (392)
396 cd00755 YgdL_like Family of ac 95.5 0.17 3.6E-06 38.6 9.1 37 33-72 8-44 (231)
397 cd05213 NAD_bind_Glutamyl_tRNA 95.5 0.083 1.8E-06 41.9 7.7 37 34-73 176-212 (311)
398 TIGR00518 alaDH alanine dehydr 95.5 0.11 2.4E-06 42.3 8.6 35 35-73 166-200 (370)
399 PF02670 DXP_reductoisom: 1-de 95.5 0.061 1.3E-06 37.1 5.9 36 39-75 1-36 (129)
400 cd05212 NAD_bind_m-THF_DH_Cycl 95.5 0.075 1.6E-06 37.2 6.5 37 33-72 25-61 (140)
401 PRK06153 hypothetical protein; 95.5 0.087 1.9E-06 43.0 7.7 39 31-72 171-209 (393)
402 PRK08306 dipicolinate synthase 95.5 0.15 3.2E-06 40.3 8.9 37 33-73 149-185 (296)
403 PRK14189 bifunctional 5,10-met 95.4 0.061 1.3E-06 42.1 6.5 35 33-70 155-189 (285)
404 cd01487 E1_ThiF_like E1_ThiF_l 95.4 0.043 9.3E-07 39.8 5.3 33 38-73 1-33 (174)
405 TIGR01809 Shik-DH-AROM shikima 95.4 0.073 1.6E-06 41.7 7.0 37 34-73 123-159 (282)
406 COG0604 Qor NADPH:quinone redu 95.4 0.051 1.1E-06 43.5 6.1 27 35-61 142-168 (326)
407 KOG1202|consensus 95.3 0.039 8.4E-07 50.8 5.7 120 36-176 1768-1902(2376)
408 TIGR00507 aroE shikimate 5-deh 95.3 0.077 1.7E-06 41.2 6.9 36 34-73 115-150 (270)
409 cd00300 LDH_like L-lactate deh 95.3 0.25 5.4E-06 39.0 9.8 104 39-168 1-105 (300)
410 PRK08328 hypothetical protein; 95.3 0.13 2.8E-06 39.1 7.8 37 33-72 24-60 (231)
411 TIGR01771 L-LDH-NAD L-lactate 95.3 0.26 5.6E-06 39.0 9.7 102 41-168 1-103 (299)
412 PRK00045 hemA glutamyl-tRNA re 95.2 0.1 2.3E-06 43.2 7.7 37 34-73 180-216 (423)
413 COG0111 SerA Phosphoglycerate 95.2 0.16 3.5E-06 40.6 8.5 36 33-72 139-174 (324)
414 PRK14176 bifunctional 5,10-met 95.2 0.088 1.9E-06 41.3 6.6 36 33-71 161-196 (287)
415 TIGR01035 hemA glutamyl-tRNA r 95.1 0.13 2.8E-06 42.6 7.9 38 33-73 177-214 (417)
416 COG0240 GpsA Glycerol-3-phosph 95.1 0.13 2.9E-06 40.9 7.6 79 37-139 2-80 (329)
417 TIGR01915 npdG NADPH-dependent 95.1 0.04 8.7E-07 41.4 4.6 34 37-73 1-34 (219)
418 PRK14191 bifunctional 5,10-met 95.1 0.12 2.6E-06 40.5 7.2 34 33-69 154-187 (285)
419 PRK14190 bifunctional 5,10-met 95.0 0.12 2.6E-06 40.5 7.1 35 33-70 155-189 (284)
420 PRK14180 bifunctional 5,10-met 95.0 0.11 2.3E-06 40.7 6.8 36 33-71 155-190 (282)
421 TIGR01850 argC N-acetyl-gamma- 95.0 0.086 1.9E-06 42.5 6.4 30 37-68 1-30 (346)
422 PF00670 AdoHcyase_NAD: S-aden 95.0 0.34 7.3E-06 34.8 8.7 39 31-73 18-56 (162)
423 PRK14172 bifunctional 5,10-met 94.9 0.11 2.4E-06 40.6 6.6 35 33-70 155-189 (278)
424 PRK14177 bifunctional 5,10-met 94.9 0.11 2.4E-06 40.7 6.6 35 33-70 156-190 (284)
425 cd01079 NAD_bind_m-THF_DH NAD 94.9 0.33 7.2E-06 35.9 8.6 36 33-71 59-94 (197)
426 PRK14173 bifunctional 5,10-met 94.8 0.12 2.6E-06 40.6 6.6 35 33-70 152-186 (287)
427 PRK11199 tyrA bifunctional cho 94.8 0.11 2.4E-06 42.4 6.5 36 35-73 97-132 (374)
428 PRK10669 putative cation:proto 94.8 0.14 3.1E-06 43.8 7.5 71 37-138 418-489 (558)
429 cd01339 LDH-like_MDH L-lactate 94.7 0.54 1.2E-05 37.0 10.3 104 39-168 1-105 (300)
430 PRK14188 bifunctional 5,10-met 94.7 0.12 2.7E-06 40.7 6.5 38 33-73 155-193 (296)
431 cd01489 Uba2_SUMO Ubiquitin ac 94.7 0.2 4.3E-06 39.9 7.7 92 38-140 1-100 (312)
432 PRK14027 quinate/shikimate deh 94.7 0.16 3.4E-06 39.9 7.0 37 34-73 125-161 (283)
433 PRK14186 bifunctional 5,10-met 94.7 0.12 2.7E-06 40.7 6.3 34 33-69 155-188 (297)
434 PRK06728 aspartate-semialdehyd 94.7 0.11 2.4E-06 41.9 6.2 37 35-71 4-41 (347)
435 PF01113 DapB_N: Dihydrodipico 94.6 0.089 1.9E-06 35.9 4.9 36 37-73 1-36 (124)
436 PRK15469 ghrA bifunctional gly 94.6 0.29 6.2E-06 39.0 8.4 37 33-73 133-169 (312)
437 PRK07877 hypothetical protein; 94.6 0.057 1.2E-06 47.6 4.8 97 32-140 103-206 (722)
438 cd01075 NAD_bind_Leu_Phe_Val_D 94.6 0.08 1.7E-06 39.3 5.0 39 31-73 23-61 (200)
439 PRK14179 bifunctional 5,10-met 94.6 0.12 2.6E-06 40.5 6.1 34 33-69 155-188 (284)
440 cd08259 Zn_ADH5 Alcohol dehydr 94.6 0.25 5.4E-06 38.7 8.1 36 35-73 162-197 (332)
441 KOG4022|consensus 94.6 1.2 2.6E-05 32.2 11.0 35 36-73 3-37 (236)
442 PRK08410 2-hydroxyacid dehydro 94.5 0.46 1E-05 37.7 9.4 38 32-73 141-178 (311)
443 PRK14169 bifunctional 5,10-met 94.5 0.17 3.6E-06 39.7 6.6 34 33-69 153-186 (282)
444 PRK14170 bifunctional 5,10-met 94.5 0.16 3.5E-06 39.8 6.5 34 33-69 154-187 (284)
445 COG0136 Asd Aspartate-semialde 94.5 0.14 2.9E-06 41.0 6.2 36 36-71 1-36 (334)
446 PRK00258 aroE shikimate 5-dehy 94.5 0.082 1.8E-06 41.2 5.0 38 33-73 120-157 (278)
447 PRK07411 hypothetical protein; 94.4 0.17 3.7E-06 41.5 7.0 96 33-140 35-138 (390)
448 COG0002 ArgC Acetylglutamate s 94.4 0.11 2.4E-06 41.6 5.6 34 36-71 2-35 (349)
449 PRK14187 bifunctional 5,10-met 94.4 0.17 3.6E-06 39.9 6.5 36 33-71 157-192 (294)
450 PRK13243 glyoxylate reductase; 94.4 0.33 7.1E-06 39.0 8.3 38 32-73 146-183 (333)
451 PRK14183 bifunctional 5,10-met 94.4 0.16 3.5E-06 39.7 6.3 34 33-69 154-187 (281)
452 PRK14166 bifunctional 5,10-met 94.4 0.18 4E-06 39.4 6.6 35 33-70 154-188 (282)
453 cd01484 E1-2_like Ubiquitin ac 94.3 0.3 6.4E-06 37.3 7.6 32 38-72 1-32 (234)
454 PRK14851 hypothetical protein; 94.3 0.21 4.6E-06 43.9 7.5 97 32-140 39-143 (679)
455 PLN00203 glutamyl-tRNA reducta 94.3 0.16 3.5E-06 43.2 6.7 37 34-73 264-300 (519)
456 PF13241 NAD_binding_7: Putati 94.1 0.073 1.6E-06 35.1 3.5 36 33-72 4-39 (103)
457 TIGR03693 ocin_ThiF_like putat 94.1 0.35 7.5E-06 41.8 8.3 88 34-140 127-214 (637)
458 PRK14171 bifunctional 5,10-met 94.1 0.19 4.2E-06 39.4 6.3 34 33-69 156-189 (288)
459 PRK14182 bifunctional 5,10-met 94.1 0.21 4.5E-06 39.1 6.4 35 33-70 154-188 (282)
460 TIGR02825 B4_12hDH leukotriene 94.1 0.58 1.3E-05 36.9 9.2 37 34-73 137-173 (325)
461 cd08294 leukotriene_B4_DH_like 94.1 0.51 1.1E-05 37.0 8.8 37 34-73 142-178 (329)
462 PRK14178 bifunctional 5,10-met 94.0 0.27 5.9E-06 38.4 6.9 37 33-72 149-185 (279)
463 PLN02516 methylenetetrahydrofo 94.0 0.23 4.9E-06 39.2 6.4 35 33-70 164-198 (299)
464 PF00070 Pyr_redox: Pyridine n 94.0 0.71 1.5E-05 28.6 7.7 34 38-75 1-34 (80)
465 COG0169 AroE Shikimate 5-dehyd 93.9 0.18 4E-06 39.5 5.8 36 35-73 125-160 (283)
466 PRK08664 aspartate-semialdehyd 93.8 0.12 2.6E-06 41.7 4.8 35 36-72 3-37 (349)
467 PRK06487 glycerate dehydrogena 93.8 0.46 9.9E-06 37.9 8.0 36 33-72 145-180 (317)
468 COG0373 HemA Glutamyl-tRNA red 93.7 0.34 7.4E-06 40.0 7.3 39 32-73 174-212 (414)
469 PRK06932 glycerate dehydrogena 93.7 0.64 1.4E-05 37.0 8.8 36 33-72 144-179 (314)
470 PRK06598 aspartate-semialdehyd 93.7 0.14 3E-06 41.6 5.0 36 37-72 2-38 (369)
471 PRK03659 glutathione-regulated 93.6 0.31 6.8E-06 42.3 7.4 72 37-139 401-473 (601)
472 PRK14193 bifunctional 5,10-met 93.6 0.27 5.8E-06 38.6 6.2 34 33-69 155-190 (284)
473 COG1052 LdhA Lactate dehydroge 93.6 0.65 1.4E-05 37.2 8.6 39 32-74 142-180 (324)
474 PF03807 F420_oxidored: NADP o 93.6 0.96 2.1E-05 28.9 8.0 35 38-73 1-36 (96)
475 PLN02520 bifunctional 3-dehydr 93.6 0.12 2.6E-06 44.1 4.6 36 34-73 377-412 (529)
476 PRK06849 hypothetical protein; 93.5 0.16 3.4E-06 41.5 5.1 36 35-73 3-38 (389)
477 TIGR01745 asd_gamma aspartate- 93.5 0.12 2.5E-06 42.0 4.3 36 37-72 1-37 (366)
478 cd08293 PTGR2 Prostaglandin re 93.5 0.69 1.5E-05 36.7 8.7 35 37-73 156-190 (345)
479 PF03446 NAD_binding_2: NAD bi 93.5 0.58 1.3E-05 33.3 7.5 34 36-73 1-34 (163)
480 PRK07574 formate dehydrogenase 93.4 0.37 8E-06 39.5 7.0 37 33-73 189-225 (385)
481 PRK06719 precorrin-2 dehydroge 93.4 0.16 3.6E-06 36.2 4.5 38 29-70 6-43 (157)
482 PRK06436 glycerate dehydrogena 93.4 0.75 1.6E-05 36.5 8.5 37 33-73 119-155 (303)
483 PLN02928 oxidoreductase family 93.3 0.92 2E-05 36.7 9.2 37 32-72 155-191 (347)
484 PRK13304 L-aspartate dehydroge 93.3 1.2 2.6E-05 34.5 9.5 35 37-72 2-36 (265)
485 cd08253 zeta_crystallin Zeta-c 93.3 0.82 1.8E-05 35.4 8.8 37 34-73 143-179 (325)
486 PLN02616 tetrahydrofolate dehy 93.3 0.32 7E-06 39.3 6.4 35 33-70 228-262 (364)
487 cd08230 glucose_DH Glucose deh 93.3 0.75 1.6E-05 36.9 8.6 35 35-73 172-206 (355)
488 PF03721 UDPG_MGDP_dh_N: UDP-g 93.2 0.22 4.7E-06 36.5 5.0 33 37-73 1-33 (185)
489 PRK14181 bifunctional 5,10-met 93.2 0.34 7.4E-06 38.0 6.3 37 33-70 150-188 (287)
490 PLN02897 tetrahydrofolate dehy 93.2 0.36 7.8E-06 38.8 6.5 35 33-70 211-245 (345)
491 PRK14184 bifunctional 5,10-met 93.2 0.43 9.3E-06 37.5 6.7 36 33-71 154-193 (286)
492 cd01488 Uba3_RUB Ubiquitin act 93.2 0.74 1.6E-05 36.3 8.1 89 38-139 1-97 (291)
493 PRK14167 bifunctional 5,10-met 93.1 0.34 7.3E-06 38.3 6.1 27 33-59 154-180 (297)
494 PRK14852 hypothetical protein; 93.1 0.37 8E-06 43.9 7.0 96 33-140 329-432 (989)
495 PRK05476 S-adenosyl-L-homocyst 93.1 0.2 4.3E-06 41.6 5.0 37 33-73 209-245 (425)
496 PRK14168 bifunctional 5,10-met 92.9 0.42 9.1E-06 37.7 6.4 37 33-69 158-195 (297)
497 PRK07634 pyrroline-5-carboxyla 92.9 0.62 1.3E-05 35.3 7.3 38 34-72 2-40 (245)
498 PRK03562 glutathione-regulated 92.9 0.48 1E-05 41.3 7.4 72 37-139 401-473 (621)
499 COG0289 DapB Dihydrodipicolina 92.9 1.3 2.9E-05 34.2 8.8 37 36-73 2-38 (266)
500 PRK05562 precorrin-2 dehydroge 92.8 1.4 3E-05 33.4 8.9 40 29-72 18-57 (223)
No 1
>PLN02996 fatty acyl-CoA reductase
Probab=99.87 E-value=5.1e-21 Score=159.27 Aligned_cols=149 Identities=26% Similarity=0.562 Sum_probs=119.1
Q ss_pred cccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHH-HHHhhhhhhcccccCccc-----C
Q psy17489 29 KVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVK-NMLNSVIFDRLNKEVPDF-----R 102 (177)
Q Consensus 29 ~~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~ 102 (177)
.+....+||+|+|||||||+|+++++.|++.++++.+|+++.|.+......+++. +......++.+.+..+.. .
T Consensus 4 ~i~~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~ 83 (491)
T PLN02996 4 SCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLIS 83 (491)
T ss_pred cHHHHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhh
Confidence 3445678999999999999999999999988778889999999988777777765 343433443332222211 2
Q ss_pred CCeEEEeCCCCCCCCCCCHHH-HHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 103 SKIQVIPSNLESEHLGLSEDS-EQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 103 ~~v~~~~~D~~~~~~~~~~~~-~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
.++.++.+|++++.+|++... +..+++++|+|||+||..+...+++.++++|+.++.+++++|++.+++++|||+
T Consensus 84 ~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~v 159 (491)
T PLN02996 84 EKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHV 159 (491)
T ss_pred cCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 579999999999988887655 577788999999999998777777889999999999999999986578899985
No 2
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.86 E-value=1.4e-20 Score=158.68 Aligned_cols=147 Identities=33% Similarity=0.591 Sum_probs=122.8
Q ss_pred cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHH-HHHhhhhhhcccccCccc-----CCC
Q psy17489 31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVK-NMLNSVIFDRLNKEVPDF-----RSK 104 (177)
Q Consensus 31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~ 104 (177)
....++++|+|||||||+|++|+++|++.++++.+|+++.|.+......+++. ++.....++++.++.+.. ..+
T Consensus 114 ~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~K 193 (605)
T PLN02503 114 AEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSK 193 (605)
T ss_pred hhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCcccccccccc
Confidence 45678999999999999999999999998778889999999887777777775 444455555554333221 467
Q ss_pred eEEEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 105 IQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 105 v~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+.++.+|++++.+|++.+..+.+.+++|+|||+||...+..+++..+++|+.++.+++++|++.+++++|||+
T Consensus 194 i~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~v 266 (605)
T PLN02503 194 LVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQV 266 (605)
T ss_pred EEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEc
Confidence 9999999999999999888888888999999999998877778889999999999999999987568889885
No 3
>KOG1502|consensus
Probab=99.84 E-value=1.9e-20 Score=145.85 Aligned_cols=121 Identities=21% Similarity=0.345 Sum_probs=99.5
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
.+++|+||||+||||+||++.|+++| +.|++.+|++..+ +...++.+ .+....+...+..|+.+
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rG---Y~V~gtVR~~~~~---k~~~~L~~----------l~~a~~~l~l~~aDL~d 68 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRG---YTVRGTVRDPEDE---KKTEHLRK----------LEGAKERLKLFKADLLD 68 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCC---CEEEEEEcCcchh---hhHHHHHh----------cccCcccceEEeccccc
Confidence 57899999999999999999999999 5899999998653 22222211 12234568999999999
Q ss_pred CCCCCCHHHHHHHhcCCcEEEEcCcccCchHH--HHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 115 EHLGLSEDSEQLIKSKVNIIFHCAASLRFDEA--LQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~--~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+ +++..+++++|+|||.|.+..+... ..+.+++.+.|+.|++++|++.+++|||||.
T Consensus 69 ~------~sf~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~T 127 (327)
T KOG1502|consen 69 E------GSFDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYT 127 (327)
T ss_pred c------chHHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEe
Confidence 9 7999999999999999999765322 4478999999999999999999669999983
No 4
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.83 E-value=7.3e-21 Score=145.75 Aligned_cols=132 Identities=37% Similarity=0.630 Sum_probs=91.2
Q ss_pred EecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhh-hcccccCcccCCCeEEEeCCCCCCCCCC
Q psy17489 41 VTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIF-DRLNKEVPDFRSKIQVIPSNLESEHLGL 119 (177)
Q Consensus 41 VtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~D~~~~~~~~ 119 (177)
|||||||+|++++.+|++.+..+ +|+|+.|.++.....+++.+.+.+..+ +...+ ....+++++.+|++++.+|+
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~-~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~---~~~~ri~~v~GDl~~~~lGL 76 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDV-KIYCLVRASSSQSALERLKDALKEYGLWDDLDK---EALSRIEVVEGDLSQPNLGL 76 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TT-EEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-H---HHTTTEEEEE--TTSGGGG-
T ss_pred CcCCCcHHHHHHHHHHHcCCCCc-EEEEEEeCcccccchhhhhhhcccccchhhhhh---hhhccEEEEeccccccccCC
Confidence 79999999999999999997544 999999987655555666544332221 11100 12479999999999999999
Q ss_pred CHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 120 SEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 120 ~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+.+.+..+.+.+|+|||+||..++..++..+.++|+.++.++++.|.+. +.++|+||
T Consensus 77 ~~~~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~-~~~~~~~i 133 (249)
T PF07993_consen 77 SDEDYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQG-KRKRFHYI 133 (249)
T ss_dssp -HHHHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSS-S---EEEE
T ss_pred ChHHhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhc-cCcceEEe
Confidence 9999999999999999999999998888889999999999999999987 55699885
No 5
>KOG1221|consensus
Probab=99.82 E-value=2.2e-19 Score=145.91 Aligned_cols=148 Identities=40% Similarity=0.717 Sum_probs=136.6
Q ss_pred ccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEe
Q psy17489 30 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP 109 (177)
Q Consensus 30 ~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 109 (177)
.....++|+++||||+||+|.-++++|++.-+++.++|.+.|.+.+....+++.....+..++++.+..++...++..+.
T Consensus 6 i~~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~ 85 (467)
T KOG1221|consen 6 IVQFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIA 85 (467)
T ss_pred HHHHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecc
Confidence 34567899999999999999999999999877899999999999999999999999999999998887777788999999
Q ss_pred CCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 110 SNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 110 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
||++++.+|.+..+.+...+++|+|||+||.+.+.+..+....+|+.|+.++++.|++..+.+-||+|
T Consensus 86 GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhV 153 (467)
T KOG1221|consen 86 GDISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHV 153 (467)
T ss_pred ccccCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEe
Confidence 99999999999888888888999999999999999999999999999999999999999888888876
No 6
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.79 E-value=5.5e-19 Score=137.57 Aligned_cols=112 Identities=22% Similarity=0.322 Sum_probs=90.9
Q ss_pred EEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCCC
Q psy17489 40 LVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLGL 119 (177)
Q Consensus 40 lVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~ 119 (177)
|||||+||+|++|+++|++.|+ ...|.++++........ .+. ......++.+|+++.
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~-~~~Vr~~d~~~~~~~~~-~~~-----------------~~~~~~~~~~Di~d~---- 57 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGY-IYEVRVLDRSPPPKFLK-DLQ-----------------KSGVKEYIQGDITDP---- 57 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCC-ceEEEEcccccccccch-hhh-----------------cccceeEEEeccccH----
Confidence 6999999999999999999984 56888888866432110 000 112334899999999
Q ss_pred CHHHHHHHhcCCcEEEEcCcccCch--HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 120 SEDSEQLIKSKVNIIFHCAASLRFD--EALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 120 ~~~~~~~~~~~~d~vi~~aa~~~~~--~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+++..+++++|+|||+|++.... ...+.++++|+.|+.+++++|++. +++||||.
T Consensus 58 --~~l~~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~-~VkrlVyt 114 (280)
T PF01073_consen 58 --ESLEEALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKA-GVKRLVYT 114 (280)
T ss_pred --HHHHHHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEE
Confidence 89999999999999999987653 356779999999999999999998 99999984
No 7
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.79 E-value=9.4e-19 Score=137.80 Aligned_cols=132 Identities=27% Similarity=0.410 Sum_probs=115.9
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHh-hhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN-SVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+++++||||||+|.+++..|+..- + .+|+|++|..+.+.+..++++.+. ...++.. ...+++.+.+|+..+
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~-~-~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~------~~~ri~vv~gDl~e~ 72 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRS-D-AKVICLVRAQSDEAALARLEKTFDLYRHWDEL------SADRVEVVAGDLAEP 72 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcC-C-CcEEEEEecCCHHHHHHHHHHHhhhhhhhhhh------hcceEEEEecccccc
Confidence 579999999999999999999874 3 699999999887777788888776 3333322 347899999999999
Q ss_pred CCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 116 HLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
.++++...+..+.+.+|.|||+||.++...++.++...|+.|+..+++.|... +.|.|.||
T Consensus 73 ~lGL~~~~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~g-k~Kp~~yV 133 (382)
T COG3320 73 DLGLSERTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATG-KPKPLHYV 133 (382)
T ss_pred cCCCCHHHHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcC-CCceeEEE
Confidence 99999999999999999999999999988899999999999999999999997 88888886
No 8
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.78 E-value=1.2e-18 Score=143.04 Aligned_cols=140 Identities=21% Similarity=0.363 Sum_probs=113.1
Q ss_pred ccCCCCCccccccccccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCC-hHHHHHHHHhhhhhhc
Q psy17489 15 DTALPESPIMQEEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS-PEERVKNMLNSVIFDR 93 (177)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~ 93 (177)
...+.+.+...+......+..||+|+||||+|.||+.+++++++.++ .+++.++|++.... .+.++.+.+.
T Consensus 229 eDLLgR~pV~~d~~~i~~~~~gK~vLVTGagGSiGsel~~qil~~~p--~~i~l~~~~E~~~~~i~~el~~~~~------ 300 (588)
T COG1086 229 EDLLGRPPVALDTELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNP--KEIILFSRDEYKLYLIDMELREKFP------ 300 (588)
T ss_pred HHHhCCCCCCCCHHHHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCC--CEEEEecCchHHHHHHHHHHHhhCC------
Confidence 34455666666666777889999999999999999999999999875 89999999874321 1222222111
Q ss_pred ccccCcccCCCeEEEeCCCCCCCCCCCHHHHHHHhcC--CcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 94 LNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSK--VNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 94 ~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~--~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
..++.++-+|+.|. +.+..++++ +|+|+|.||..++ ...+.+.+++|+.|+.|++++|.++
T Consensus 301 --------~~~~~~~igdVrD~------~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~ 366 (588)
T COG1086 301 --------ELKLRFYIGDVRDR------DRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN 366 (588)
T ss_pred --------CcceEEEecccccH------HHHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh
Confidence 25788899999999 899999997 9999999998764 5677889999999999999999999
Q ss_pred CCCCCceeC
Q psy17489 169 VNLKRFCEL 177 (177)
Q Consensus 169 ~~~~~~v~v 177 (177)
++++||++
T Consensus 367 -~V~~~V~i 374 (588)
T COG1086 367 -GVKKFVLI 374 (588)
T ss_pred -CCCEEEEE
Confidence 99999975
No 9
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.75 E-value=2.5e-17 Score=131.85 Aligned_cols=124 Identities=19% Similarity=0.213 Sum_probs=93.6
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+|+||||+||||++|++.|++.| .+|++++|...... ..+.+.... . ......++.++.+|+.
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g---~~V~~~d~~~~~~~--~~~~~~~~~-----~---~~~~~~~~~~~~~Di~ 79 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLN---QTVIGLDNFSTGYQ--HNLDDVRTS-----V---SEEQWSRFIFIQGDIR 79 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCC---CEEEEEeCCCCcch--hhhhhhhhc-----c---ccccCCceEEEEccCC
Confidence 567899999999999999999999998 58999988643211 111111000 0 0001246889999999
Q ss_pred CCCCCCCHHHHHHHhcCCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+. +.+..+++++|+|||+|+..... ++...++++|+.++.+++++|++. ++++|||+
T Consensus 80 d~------~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~v~~ 139 (348)
T PRK15181 80 KF------TDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-HVSSFTYA 139 (348)
T ss_pred CH------HHHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEe
Confidence 97 67888889999999999975432 344567899999999999999998 89999985
No 10
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.74 E-value=1.3e-17 Score=127.78 Aligned_cols=110 Identities=20% Similarity=0.311 Sum_probs=90.2
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+||||||.||||+|.+..|++.| ..|++++.-..+.. +.+.. ....++++|+.|.
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G---~~vvV~DNL~~g~~--~~v~~------------------~~~~f~~gDi~D~- 56 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTG---HEVVVLDNLSNGHK--IALLK------------------LQFKFYEGDLLDR- 56 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCC---CeEEEEecCCCCCH--HHhhh------------------ccCceEEeccccH-
Confidence 589999999999999999999999 58888887554321 11110 1158999999998
Q ss_pred CCCCHHHHHHHhc--CCcEEEEcCcccCchH---HHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489 117 LGLSEDSEQLIKS--KVNIIFHCAASLRFDE---ALQKAIRANLYATKQMLNLAKECVNLKRFCE 176 (177)
Q Consensus 117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~~~---~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~ 176 (177)
+.+.++|+ ++|.|||+||...+.+ .+.++++.|+.++.+|+++++++ ++++|||
T Consensus 57 -----~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~-gv~~~vF 115 (329)
T COG1087 57 -----ALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQT-GVKKFIF 115 (329)
T ss_pred -----HHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHh-CCCEEEE
Confidence 78888886 6999999999876544 45578999999999999999999 9999998
No 11
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.74 E-value=5e-17 Score=128.38 Aligned_cols=121 Identities=19% Similarity=0.309 Sum_probs=91.8
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
++++++||||+||||++++++|++.| ++|++++|+.... ........ .....+++.++.+|+.+
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g---~~V~~~~r~~~~~---~~~~~~~~----------~~~~~~~~~~~~~Dl~~ 66 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRG---YTVKATVRDPNDP---KKTEHLLA----------LDGAKERLHLFKANLLE 66 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCC---CEEEEEEcCCCch---hhHHHHHh----------ccCCCCceEEEeccccC
Confidence 47899999999999999999999999 5888888875321 11111110 00012478899999999
Q ss_pred CCCCCCHHHHHHHhcCCcEEEEcCcccCc--hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF--DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~--~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+ +.+..+++++|+|||+|+.... ......++++|+.++.+++++|.+..+++||||+
T Consensus 67 ~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~ 125 (322)
T PLN02662 67 E------GSFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVT 125 (322)
T ss_pred c------chHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEc
Confidence 8 6788889999999999997542 2222367899999999999999876478899985
No 12
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.74 E-value=5.2e-17 Score=128.52 Aligned_cols=121 Identities=21% Similarity=0.320 Sum_probs=92.9
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
++++++||||+||||++++++|++.| .+|+++.|+.... +.+.+.... .....++.++.+|+++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~---~~~~~~~~~----------~~~~~~~~~~~~Dl~~ 67 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRG---YTVKATVRDLTDR---KKTEHLLAL----------DGAKERLKLFKADLLE 67 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCCcch---HHHHHHHhc----------cCCCCceEEEecCCCC
Confidence 57899999999999999999999999 5888888865432 122221110 0012468899999999
Q ss_pred CCCCCCHHHHHHHhcCCcEEEEcCcccCc--hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF--DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~--~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+ +.+..+++++|+|||+|+.... .......+++|+.++.+++++|++.++++||||+
T Consensus 68 ~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~ 126 (322)
T PLN02986 68 E------SSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILT 126 (322)
T ss_pred c------chHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEe
Confidence 8 6888889999999999997532 2233457899999999999999986478999985
No 13
>PLN02214 cinnamoyl-CoA reductase
Probab=99.73 E-value=6.7e-17 Score=129.16 Aligned_cols=119 Identities=15% Similarity=0.256 Sum_probs=93.4
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
..++++++||||+||||+++++.|++.| ++|++++|+...... ..+... .....++.++.+|+
T Consensus 7 ~~~~~~vlVTGatGfIG~~l~~~L~~~G---~~V~~~~r~~~~~~~-~~~~~~-------------~~~~~~~~~~~~Dl 69 (342)
T PLN02214 7 SPAGKTVCVTGAGGYIASWIVKILLERG---YTVKGTVRNPDDPKN-THLREL-------------EGGKERLILCKADL 69 (342)
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCc---CEEEEEeCCchhhhH-HHHHHh-------------hCCCCcEEEEecCc
Confidence 3567899999999999999999999999 588988886532110 111111 00113578899999
Q ss_pred CCCCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 113 ESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
.+. +.+..+++++|+|||+|+... .++...+++|+.++.+++++|++. +++||||+
T Consensus 70 ~d~------~~~~~~~~~~d~Vih~A~~~~--~~~~~~~~~nv~gt~~ll~aa~~~-~v~r~V~~ 125 (342)
T PLN02214 70 QDY------EALKAAIDGCDGVFHTASPVT--DDPEQMVEPAVNGAKFVINAAAEA-KVKRVVIT 125 (342)
T ss_pred CCh------HHHHHHHhcCCEEEEecCCCC--CCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEe
Confidence 998 788888999999999999753 346678999999999999999998 88999984
No 14
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.72 E-value=1.1e-16 Score=127.58 Aligned_cols=120 Identities=23% Similarity=0.377 Sum_probs=90.6
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
++++++||||+||||+++++.|++.| ++|++++|+.... ........ + . ..+++.++.+|+++
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g---~~V~~~~r~~~~~---~~~~~~~~------~----~-~~~~~~~~~~Dl~d 70 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKG---YAVNTTVRDPENQ---KKIAHLRA------L----Q-ELGDLKIFGADLTD 70 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCC---CEEEEEECCCCCH---HHHHHHHh------c----C-CCCceEEEEcCCCC
Confidence 47899999999999999999999998 5888888865321 11111000 0 0 11368889999999
Q ss_pred CCCCCCHHHHHHHhcCCcEEEEcCcccCch--HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 115 EHLGLSEDSEQLIKSKVNIIFHCAASLRFD--EALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~--~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
. +.+..+++++|+|||+|+..... .....++++|+.++.++++++.+.+++++|||+
T Consensus 71 ~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~ 129 (338)
T PLN00198 71 E------ESFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILT 129 (338)
T ss_pred h------HHHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEe
Confidence 8 67888889999999999975432 233457799999999999999886468899984
No 15
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.71 E-value=5.1e-16 Score=127.97 Aligned_cols=125 Identities=14% Similarity=0.101 Sum_probs=90.1
Q ss_pred cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCC-C-------h------HHHHHHHHhhhhhhcccc
Q psy17489 31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS-S-------P------EERVKNMLNSVIFDRLNK 96 (177)
Q Consensus 31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~-~-------~------~~~~~~~~~~~~~~~~~~ 96 (177)
+...++|+|+||||+||||++|++.|++.| +.|+++++..... . . .+.+.....
T Consensus 42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G---~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--------- 109 (442)
T PLN02572 42 SSSSKKKKVMVIGGDGYCGWATALHLSKRG---YEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKE--------- 109 (442)
T ss_pred CccccCCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEeccccccccccccccccccccchHHHHHHHHH---------
Confidence 456788999999999999999999999999 5788876532110 0 0 011111100
Q ss_pred cCcccCCCeEEEeCCCCCCCCCCCHHHHHHHhc--CCcEEEEcCcccCch------HHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 97 EVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKS--KVNIIFHCAASLRFD------EALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 97 ~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~--~~d~vi~~aa~~~~~------~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
....++.++.+|+.+. +.+..+++ ++|+|||+|+..... ..++..+++|+.++.+++++|++.
T Consensus 110 ---~~~~~v~~v~~Dl~d~------~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~ 180 (442)
T PLN02572 110 ---VSGKEIELYVGDICDF------EFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF 180 (442)
T ss_pred ---hhCCcceEEECCCCCH------HHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 0113688999999998 77888887 589999999864321 223456789999999999999998
Q ss_pred CCCC-CceeC
Q psy17489 169 VNLK-RFCEL 177 (177)
Q Consensus 169 ~~~~-~~v~v 177 (177)
+++ +|||+
T Consensus 181 -gv~~~~V~~ 189 (442)
T PLN02572 181 -APDCHLVKL 189 (442)
T ss_pred -CCCccEEEE
Confidence 775 88874
No 16
>PLN02650 dihydroflavonol-4-reductase
Probab=99.70 E-value=2.1e-16 Score=126.51 Aligned_cols=121 Identities=21% Similarity=0.382 Sum_probs=91.3
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
..++|+||||+||||+++++.|++.| .+|++++|+.... ..+..... ......++.++.+|+.+
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G---~~V~~~~r~~~~~---~~~~~~~~----------~~~~~~~~~~v~~Dl~d 67 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERG---YTVRATVRDPANV---KKVKHLLD----------LPGATTRLTLWKADLAV 67 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCC---CEEEEEEcCcchh---HHHHHHHh----------ccCCCCceEEEEecCCC
Confidence 35789999999999999999999998 5899888865321 11111111 00011357889999999
Q ss_pred CCCCCCHHHHHHHhcCCcEEEEcCcccCch--HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 115 EHLGLSEDSEQLIKSKVNIIFHCAASLRFD--EALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~--~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
. +.+..+++++|+|||+|+..... ......+++|+.++.+++++|.+.+.++||||+
T Consensus 68 ~------~~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~ 126 (351)
T PLN02650 68 E------GSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFT 126 (351)
T ss_pred h------hhHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEe
Confidence 8 67888889999999999975432 233467899999999999999987347899985
No 17
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.70 E-value=1.8e-17 Score=128.08 Aligned_cols=117 Identities=26% Similarity=0.414 Sum_probs=81.3
Q ss_pred EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCe----EEEeCCCCC
Q psy17489 39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKI----QVIPSNLES 114 (177)
Q Consensus 39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v----~~~~~D~~~ 114 (177)
||||||+|.||+.|+++|++.++ ..++++++++... -.+.+.+. +..+ ..++ ..+.+|+.|
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p--~~lil~d~~E~~l---~~l~~~l~--------~~~~--~~~v~~~~~~vigDvrd 65 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP--KKLILFDRDENKL---YELERELR--------SRFP--DPKVRFEIVPVIGDVRD 65 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB---SEEEEEES-HHHH---HHHHHHCH--------HHC----TTCEEEEE--CTSCCH
T ss_pred CEEEccccHHHHHHHHHHHhcCC--CeEEEeCCChhHH---HHHHHHHh--------hccc--ccCcccccCceeecccC
Confidence 79999999999999999999876 7999999976321 11221111 0001 1234 345789999
Q ss_pred CCCCCCHHHHHHHhc--CCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 115 EHLGLSEDSEQLIKS--KVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 115 ~~~~~~~~~~~~~~~--~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
. +.+..+++ ++|+|||.||..+. ...+.+++++|+.|+.|++++|.++ ++++||+|
T Consensus 66 ~------~~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-~v~~~v~I 126 (293)
T PF02719_consen 66 K------ERLNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-GVERFVFI 126 (293)
T ss_dssp H------HHHHHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-T-SEEEEE
T ss_pred H------HHHHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEc
Confidence 8 78999998 89999999998764 3556778999999999999999999 99999985
No 18
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.70 E-value=3.5e-16 Score=124.18 Aligned_cols=119 Identities=23% Similarity=0.366 Sum_probs=91.9
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+||||+++++.|++.|. ..+|++++|+... . ..+.+.. ...++.++.+|+.
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~-~~~V~~~~r~~~~--~-~~~~~~~--------------~~~~~~~v~~Dl~ 63 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYN-PKKIIIYSRDELK--Q-WEMQQKF--------------PAPCLRFFIGDVR 63 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCC-CcEEEEEcCChhH--H-HHHHHHh--------------CCCcEEEEEccCC
Confidence 4689999999999999999999999862 2478888876421 1 1111111 0146889999999
Q ss_pred CCCCCCCHHHHHHHhcCCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
|. +.+..+++++|+|||+||.... ..+...++++|+.++.+++++|.+. ++++|||+
T Consensus 64 d~------~~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-~~~~iV~~ 123 (324)
T TIGR03589 64 DK------ERLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-GVKRVVAL 123 (324)
T ss_pred CH------HHHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEE
Confidence 98 7888889999999999997532 2234568999999999999999998 88899975
No 19
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.70 E-value=4.9e-16 Score=123.05 Aligned_cols=121 Identities=20% Similarity=0.307 Sum_probs=91.9
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
.+|+++||||+||||+++++.|++.| ++|++++|+.... ......... .....++.++.+|+++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G---~~V~~~~r~~~~~---~~~~~~~~~----------~~~~~~~~~~~~D~~d 67 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRG---YTINATVRDPKDR---KKTDHLLAL----------DGAKERLKLFKADLLD 67 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCC---CEEEEEEcCCcch---hhHHHHHhc----------cCCCCceEEEeCCCCC
Confidence 46899999999999999999999999 5788888775322 111111110 0012468899999999
Q ss_pred CCCCCCHHHHHHHhcCCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
. +.+..+++++|+|||+||.... ...+...+++|+.++.+++++|.+..++++||++
T Consensus 68 ~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~ 127 (325)
T PLN02989 68 E------GSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILT 127 (325)
T ss_pred c------hHHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEe
Confidence 8 6788888999999999997532 2345678899999999999999885357789874
No 20
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.69 E-value=4.8e-16 Score=124.10 Aligned_cols=134 Identities=27% Similarity=0.405 Sum_probs=102.2
Q ss_pred eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCC
Q psy17489 38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHL 117 (177)
Q Consensus 38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 117 (177)
+|+||||+||||+++++.|++.|+. .+|++++|+.......+++.+.+....+... .....++.++.+|++++.+
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~-~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~v~~~~~D~~~~~~ 75 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQ-AKVICLVRAASEEHAMERLREALRSYRLWQE----DLARERIEVVAGDLSEPRL 75 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCC-CEEEEEEccCCHHHHHHHHHHHHHHhCCCCc----hhhhCCEEEEeCCcCcccC
Confidence 5899999999999999999999742 4799999976533233344443332111100 0001478999999999888
Q ss_pred CCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 118 GLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 118 ~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
++..+.+..+.+++|+|||+|+......++..+.++|+.++.+++++|.+. ++++|||+
T Consensus 76 gl~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~-~~~~~v~i 134 (367)
T TIGR01746 76 GLSDAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASG-RAKPLHYV 134 (367)
T ss_pred CcCHHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhC-CCceEEEE
Confidence 877778888888999999999987766667778899999999999999997 78888875
No 21
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.68 E-value=4.8e-16 Score=123.00 Aligned_cols=108 Identities=19% Similarity=0.250 Sum_probs=87.6
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+|+||||+||+|+++++.|++.| ++|++++|+.... ..+. ..+++++.+|+.++
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g---~~V~~l~R~~~~~---~~l~------------------~~~v~~v~~Dl~d~- 55 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEG---YQVRCLVRNLRKA---SFLK------------------EWGAELVYGDLSLP- 55 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC---CeEEEEEcChHHh---hhHh------------------hcCCEEEECCCCCH-
Confidence 589999999999999999999999 5899999974211 1001 13688999999998
Q ss_pred CCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 117 LGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+.+..+++++|+|||+++... .+...+.++|+.++.+++++|++. +++||||+
T Consensus 56 -----~~l~~al~g~d~Vi~~~~~~~--~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~ 108 (317)
T CHL00194 56 -----ETLPPSFKGVTAIIDASTSRP--SDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFF 108 (317)
T ss_pred -----HHHHHHHCCCCEEEECCCCCC--CCccchhhhhHHHHHHHHHHHHHc-CCCEEEEe
Confidence 788999999999999986432 233446789999999999999998 99999985
No 22
>PLN02427 UDP-apiose/xylose synthase
Probab=99.67 E-value=7.6e-16 Score=124.86 Aligned_cols=120 Identities=18% Similarity=0.263 Sum_probs=88.5
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
.+.|+|+||||+||||+++++.|++.|. .+|++++|+... ..++.... ......+++++.+|+.
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g--~~V~~l~r~~~~------~~~l~~~~--------~~~~~~~~~~~~~Dl~ 75 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETP--HKVLALDVYNDK------IKHLLEPD--------TVPWSGRIQFHRINIK 75 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCC--CEEEEEecCchh------hhhhhccc--------cccCCCCeEEEEcCCC
Confidence 4567999999999999999999999831 588888876421 11111000 0001246899999999
Q ss_pred CCCCCCCHHHHHHHhcCCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+. +.+..+++++|+|||+|+..... .+..+.+..|+.++.+++++|++. + +||||+
T Consensus 76 d~------~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-~-~r~v~~ 134 (386)
T PLN02427 76 HD------SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHF 134 (386)
T ss_pred Ch------HHHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-C-CEEEEE
Confidence 98 78888889999999999975421 223345678999999999999987 5 789874
No 23
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.67 E-value=5.2e-16 Score=118.65 Aligned_cols=118 Identities=20% Similarity=0.315 Sum_probs=93.0
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|++|||||.||||++.+..+++...+ .+|++++.-...... +.+.... ..++..|+++|++|.
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d-~~v~~~DkLTYAgn~-~~l~~~~--------------~~~~~~fv~~DI~D~- 63 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPD-DHVVNLDKLTYAGNL-ENLADVE--------------DSPRYRFVQGDICDR- 63 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCC-ceEEEEecccccCCH-HHHHhhh--------------cCCCceEEeccccCH-
Confidence 57999999999999999999998654 578888875433222 2222221 236899999999998
Q ss_pred CCCCHHHHHHHhc--CCcEEEEcCcccCchHH---HHHHHHHhHHHHHHHHHHHHhcCCC-CCceeC
Q psy17489 117 LGLSEDSEQLIKS--KVNIIFHCAASLRFDEA---LQKAIRANLYATKQMLNLAKECVNL-KRFCEL 177 (177)
Q Consensus 117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~~~~---~~~~~~~nv~~~~~ll~~~~~~~~~-~~~v~v 177 (177)
+.+.++++ .+|+|+|+||-.++..+ ++.++++|+.|+.+|+++++++ .. .||++|
T Consensus 64 -----~~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~-~~~frf~HI 124 (340)
T COG1088 64 -----ELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKY-WGKFRFHHI 124 (340)
T ss_pred -----HHHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHh-cccceEEEe
Confidence 78888888 68999999998876544 4568999999999999999998 44 488875
No 24
>PLN02583 cinnamoyl-CoA reductase
Probab=99.66 E-value=1.9e-15 Score=118.64 Aligned_cols=120 Identities=13% Similarity=0.157 Sum_probs=90.9
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+++++||||+||||+++++.|++.| ++|++++|+.........+..+ .....++.++.+|+++.
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~G---~~V~~~~R~~~~~~~~~~~~~l-------------~~~~~~~~~~~~Dl~d~ 69 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSRG---YTVHAAVQKNGETEIEKEIRGL-------------SCEEERLKVFDVDPLDY 69 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEEcCchhhhHHHHHHhc-------------ccCCCceEEEEecCCCH
Confidence 5789999999999999999999999 5888888864322111111111 00124688899999998
Q ss_pred CCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 116 HLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+.+..++.++|.|+|.++.... ...++.++++|+.++.+++++|.+..+++|||++
T Consensus 70 ------~~~~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~ 126 (297)
T PLN02583 70 ------HSILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFT 126 (297)
T ss_pred ------HHHHHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEe
Confidence 7888899999999998765432 2335678999999999999999886468899974
No 25
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.66 E-value=1.4e-15 Score=121.62 Aligned_cols=111 Identities=14% Similarity=0.227 Sum_probs=84.8
Q ss_pred ceEEEecCCcchHHHHHHHHHhh-CCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRS-FPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
|+|+||||+||||++|++.|++. | .+|++++|+.. ...... ....+.++.+|+.+.
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~---~~V~~~~r~~~------~~~~~~--------------~~~~~~~~~~Dl~~~ 58 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTD---WEVYGMDMQTD------RLGDLV--------------NHPRMHFFEGDITIN 58 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCC---CeEEEEeCcHH------HHHHhc--------------cCCCeEEEeCCCCCC
Confidence 68999999999999999999986 5 58999887541 111111 114688999999833
Q ss_pred CCCCCHHHHHHHhcCCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 116 HLGLSEDSEQLIKSKVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
. +.+..+++++|+|||+|+.... ..+....+++|+.++.+++++|++. + ++|||+
T Consensus 59 ~-----~~~~~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-~-~~~v~~ 116 (347)
T PRK11908 59 K-----EWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFP 116 (347)
T ss_pred H-----HHHHHHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-C-CeEEEE
Confidence 1 5667778899999999997542 2344567899999999999999997 6 699885
No 26
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.66 E-value=1.8e-15 Score=121.28 Aligned_cols=119 Identities=24% Similarity=0.327 Sum_probs=88.6
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
..+|+|+||||+||||+++++.|++.| .+|++++|+... . ..+.... . ...++.++.+|+.
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G---~~V~~~~r~~~~--~-~~~~~~~------------~-~~~~~~~~~~Dl~ 68 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRG---YTVHATLRDPAK--S-LHLLSKW------------K-EGDRLRLFRADLQ 68 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCChHH--H-HHHHHhh------------c-cCCeEEEEECCCC
Confidence 467899999999999999999999999 588888876421 1 1111110 0 1246889999999
Q ss_pred CCCCCCCHHHHHHHhcCCcEEEEcCcccCch-----HHHH-----HHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRFD-----EALQ-----KAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~-----~~~~-----~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+. +.+..+++++|+|||+|+..... .+.. +.+++|+.++.+++++|++.+++++|||+
T Consensus 69 ~~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~ 136 (353)
T PLN02896 69 EE------GSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFT 136 (353)
T ss_pred CH------HHHHHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEE
Confidence 98 77888888999999999975421 1222 34566679999999999887458899874
No 27
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.65 E-value=2.8e-15 Score=120.01 Aligned_cols=119 Identities=24% Similarity=0.281 Sum_probs=90.3
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
++||+++||||+||||+++++.|++.| ++|++++|+..... ...+... ...++.++.+|+.
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G---~~V~~~~r~~~~~~---~~~~~~~-------------~~~~~~~~~~Dl~ 62 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELG---AEVYGYSLDPPTSP---NLFELLN-------------LAKKIEDHFGDIR 62 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCC---CEEEEEeCCCccch---hHHHHHh-------------hcCCceEEEccCC
Confidence 468999999999999999999999999 58888888754321 1111000 0135778899999
Q ss_pred CCCCCCCHHHHHHHhc--CCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 114 SEHLGLSEDSEQLIKS--KVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~--~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+. +.+..+++ ++|+|||+||.... ..++...+++|+.++.++++++++.+.+++|||+
T Consensus 63 ~~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~ 125 (349)
T TIGR02622 63 DA------AKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNV 125 (349)
T ss_pred CH------HHHHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEE
Confidence 98 77888877 46999999996432 2345668899999999999999887337889874
No 28
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.65 E-value=3.3e-15 Score=124.82 Aligned_cols=131 Identities=18% Similarity=0.237 Sum_probs=95.3
Q ss_pred cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489 31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS 110 (177)
Q Consensus 31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 110 (177)
.++.+|++++||||+|+||.+++++|++.| ++|++++|+.... ..+...+....++ .+-.....++.++.+
T Consensus 75 ~~~~~gKvVLVTGATGgIG~aLAr~LLk~G---~~Vval~Rn~ekl---~~l~~~l~~~~L~---~~Ga~~~~~v~iV~g 145 (576)
T PLN03209 75 LDTKDEDLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSAQRA---ESLVQSVKQMKLD---VEGTQPVEKLEIVEC 145 (576)
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCC---CeEEEEeCCHHHH---HHHHHHhhhhccc---cccccccCceEEEEe
Confidence 345578999999999999999999999999 5889998875321 1111111100000 000001135889999
Q ss_pred CCCCCCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 111 NLESEHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 111 D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
|+.+. +.+..+++++|+|||++|.... ..++...+++|+.++.++++++... +++||||+
T Consensus 146 DLtD~------esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-gVgRIV~V 206 (576)
T PLN03209 146 DLEKP------DQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-KVNHFILV 206 (576)
T ss_pred cCCCH------HHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-CCCEEEEE
Confidence 99997 7888889999999999987532 1245567899999999999999998 89999985
No 29
>KOG1371|consensus
Probab=99.64 E-value=1.9e-15 Score=116.91 Aligned_cols=119 Identities=22% Similarity=0.291 Sum_probs=94.1
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC-CCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK-KGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
+++||||||.||||+|.+.+|++.|+ .|++++.-. .......+++++.. ...++.++++|++|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy---~v~~vDNl~n~~~~sl~r~~~l~~-------------~~~~v~f~~~Dl~D 65 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGY---GVVIVDNLNNSYLESLKRVRQLLG-------------EGKSVFFVEGDLND 65 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCC---cEEEEecccccchhHHHHHHHhcC-------------CCCceEEEEeccCC
Confidence 57999999999999999999999995 677766532 22223344444322 13689999999999
Q ss_pred CCCCCCHHHHHHHhc--CCcEEEEcCcccCchHH---HHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 115 EHLGLSEDSEQLIKS--KVNIIFHCAASLRFDEA---LQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 115 ~~~~~~~~~~~~~~~--~~d~vi~~aa~~~~~~~---~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
. +.++++|+ .+|.|+|+|+.....++ +..++..|+.++.++++.++++ +++.+||.
T Consensus 66 ~------~~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~-~~~~~V~s 126 (343)
T KOG1371|consen 66 A------EALEKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH-NVKALVFS 126 (343)
T ss_pred H------HHHHHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHc-CCceEEEe
Confidence 8 78999987 68999999998765433 4468899999999999999999 69999973
No 30
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.64 E-value=4.3e-15 Score=118.63 Aligned_cols=122 Identities=17% Similarity=0.203 Sum_probs=87.5
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+++||||+||||+++++.|++.| .+|++++|+...... ..+...... . ......++.++.+|++|.
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G---~~V~~~~r~~~~~~~-~~~~~~~~~-----~---~~~~~~~~~~~~~Dl~d~- 67 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKG---YEVHGLIRRSSSFNT-QRIEHIYED-----P---HNVNKARMKLHYGDLTDS- 67 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCC---CEEEEEecCCcccch-hhhhhhhhc-----c---ccccccceeEEEeccCCH-
Confidence 589999999999999999999999 589999887532110 112211110 0 000124688999999998
Q ss_pred CCCCHHHHHHHhcC--CcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCC---CceeC
Q psy17489 117 LGLSEDSEQLIKSK--VNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLK---RFCEL 177 (177)
Q Consensus 117 ~~~~~~~~~~~~~~--~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~---~~v~v 177 (177)
+.+..+++. +|+|||+|+..+.. ......+++|+.++.+++++|++. +++ +|||+
T Consensus 68 -----~~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~-~~~~~~~~v~~ 130 (343)
T TIGR01472 68 -----SNLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL-GLIKSVKFYQA 130 (343)
T ss_pred -----HHHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh-CCCcCeeEEEe
Confidence 778888874 69999999975432 223456788999999999999987 543 78774
No 31
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.64 E-value=3.3e-15 Score=120.68 Aligned_cols=112 Identities=18% Similarity=0.142 Sum_probs=86.9
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
++|+|+||||+||||+++++.|.+.| ++|++++|..... +. .......++.+|+.+
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G---~~V~~v~r~~~~~-----~~----------------~~~~~~~~~~~Dl~d 75 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEG---HYIIASDWKKNEH-----MS----------------EDMFCHEFHLVDLRV 75 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCC---CEEEEEEeccccc-----cc----------------cccccceEEECCCCC
Confidence 67899999999999999999999998 5899998864210 00 000125678899998
Q ss_pred CCCCCCHHHHHHHhcCCcEEEEcCcccCc----hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF----DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~----~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
. +.+..++.++|+|||+|+..+. .......+..|+.++.+++++|++. ++++|||+
T Consensus 76 ~------~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~-~vk~~V~~ 135 (370)
T PLN02695 76 M------ENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN-GVKRFFYA 135 (370)
T ss_pred H------HHHHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHh-CCCEEEEe
Confidence 7 6777778899999999986531 1223445788999999999999998 89999984
No 32
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.63 E-value=2.3e-15 Score=129.50 Aligned_cols=121 Identities=24% Similarity=0.378 Sum_probs=93.6
Q ss_pred ceEEEecCCcchHHHHHHHHHh--hCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLR--SFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~--~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
|+|+||||+||||+++++.|++ .| .+|++++|+... ..+...... . ...+++++.+|+.+
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g---~~V~~l~R~~~~----~~~~~~~~~---------~--~~~~v~~~~~Dl~~ 62 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRRE---ATVHVLVRRQSL----SRLEALAAY---------W--GADRVVPLVGDLTE 62 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCC---CEEEEEECcchH----HHHHHHHHh---------c--CCCcEEEEecccCC
Confidence 4799999999999999999994 55 689999995422 222222110 0 01468899999999
Q ss_pred CCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 115 EHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+..+...+.++.+ +++|+|||+||..+...+.....++|+.++.+++++|++. ++++|||+
T Consensus 63 ~~~~~~~~~~~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~~ 123 (657)
T PRK07201 63 PGLGLSEADIAEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERL-QAATFHHV 123 (657)
T ss_pred ccCCcCHHHHHHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhc-CCCeEEEE
Confidence 7665555666666 8999999999987655566678899999999999999998 88999985
No 33
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.63 E-value=5.7e-15 Score=117.75 Aligned_cols=124 Identities=15% Similarity=0.146 Sum_probs=89.6
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+||||+++++.|++.| .+|++++|++..... ..+...... ......++.++.+|+.
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~G---~~V~~~~r~~~~~~~-~~~~~~~~~---------~~~~~~~~~~~~~Dl~ 70 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSKG---YEVHGIIRRSSNFNT-QRLDHIYID---------PHPNKARMKLHYGDLS 70 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCC---CEEEEEecccccccc-cchhhhccc---------cccccCceEEEEecCC
Confidence 568899999999999999999999999 589988886532110 111111000 0001245889999999
Q ss_pred CCCCCCCHHHHHHHhc--CCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCC-----CceeC
Q psy17489 114 SEHLGLSEDSEQLIKS--KVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLK-----RFCEL 177 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~--~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~-----~~v~v 177 (177)
+. +.+..+++ ++|+|||+|+..... ..+...+++|+.++.+++++|.+. +++ +|||+
T Consensus 71 d~------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~~~~~~v~~ 137 (340)
T PLN02653 71 DA------SSLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH-GQETGRQIKYYQA 137 (340)
T ss_pred CH------HHHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh-ccccccceeEEEe
Confidence 98 67877777 479999999975432 334556799999999999999987 654 77764
No 34
>PRK06128 oxidoreductase; Provisional
Probab=99.63 E-value=3.2e-14 Score=111.73 Aligned_cols=123 Identities=15% Similarity=0.164 Sum_probs=86.8
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+++|+++||||+|+||.++++.|++.| .+|++..++...... +.+.+.... ...++.++.+|+
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G---~~V~i~~~~~~~~~~-~~~~~~~~~------------~~~~~~~~~~Dl 115 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREG---ADIALNYLPEEEQDA-AEVVQLIQA------------EGRKAVALPGDL 115 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcC---CEEEEEeCCcchHHH-HHHHHHHHH------------cCCeEEEEecCC
Confidence 4678999999999999999999999999 577776664422111 222222111 124677899999
Q ss_pred CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCcee
Q psy17489 113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC-VNLKRFCE 176 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~ 176 (177)
++. +++..++ .++|++|||||... ..+.++..+++|+.++.++++.+... ..-.+||+
T Consensus 116 ~~~------~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~ 189 (300)
T PRK06128 116 KDE------AFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIIN 189 (300)
T ss_pred CCH------HHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEE
Confidence 997 4555443 36899999999642 13567889999999999999998753 12246665
Q ss_pred C
Q psy17489 177 L 177 (177)
Q Consensus 177 v 177 (177)
+
T Consensus 190 ~ 190 (300)
T PRK06128 190 T 190 (300)
T ss_pred E
Confidence 3
No 35
>PLN02240 UDP-glucose 4-epimerase
Probab=99.62 E-value=1.1e-14 Score=116.41 Aligned_cols=123 Identities=19% Similarity=0.234 Sum_probs=91.7
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCC-hHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS-PEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN 111 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D 111 (177)
++++++++||||+||+|+++++.|++.| .+|++++|...... ...++.+... ....++.++.+|
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~D 66 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLAG---YKVVVIDNLDNSSEEALRRVKELAG------------DLGDNLVFHKVD 66 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCCcchHHHHHHHHHhhc------------ccCccceEEecC
Confidence 3567899999999999999999999998 58888887542211 1111211110 012467889999
Q ss_pred CCCCCCCCCHHHHHHHhc--CCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 112 LESEHLGLSEDSEQLIKS--KVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~--~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+.+. +.+..+++ ++|+|||+|+.... ...+...+++|+.++.+++++|++. ++++|||+
T Consensus 67 ~~~~------~~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~ 130 (352)
T PLN02240 67 LRDK------EALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-GCKKLVFS 130 (352)
T ss_pred cCCH------HHHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEE
Confidence 9998 67777775 68999999997532 2345678999999999999999988 88899874
No 36
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.62 E-value=5.3e-15 Score=127.49 Aligned_cols=114 Identities=15% Similarity=0.237 Sum_probs=87.8
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhh-CCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRS-FPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.++|+|+||||+||||+++++.|++. | ++|++++|..... .... ...++.++.+|+
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g---~~V~~l~r~~~~~------~~~~--------------~~~~~~~~~gDl 369 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDN---YEVYGLDIGSDAI------SRFL--------------GHPRFHFVEGDI 369 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCC---cEEEEEeCCchhh------hhhc--------------CCCceEEEeccc
Confidence 46789999999999999999999985 5 5899999865211 1100 114688899999
Q ss_pred CCCCCCCCHHHHHHHhcCCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 113 ESEHLGLSEDSEQLIKSKVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
++.. ..+..+++++|+|||+||.... ......++++|+.++.+++++|++. + ++|||+
T Consensus 370 ~d~~-----~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-~-~~~V~~ 430 (660)
T PRK08125 370 SIHS-----EWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKY-N-KRIIFP 430 (660)
T ss_pred cCcH-----HHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-C-CeEEEE
Confidence 9862 2356677899999999997543 2334567899999999999999998 6 789874
No 37
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.62 E-value=9.4e-15 Score=126.12 Aligned_cols=123 Identities=24% Similarity=0.419 Sum_probs=90.5
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
..++|+|+||||+||||+++++.|++.|++ .+|++++|....... ..... .....++.++.+|+
T Consensus 3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~-~~V~~~d~~~~~~~~----~~l~~-----------~~~~~~v~~~~~Dl 66 (668)
T PLN02260 3 TYEPKNILITGAAGFIASHVANRLIRNYPD-YKIVVLDKLDYCSNL----KNLNP-----------SKSSPNFKFVKGDI 66 (668)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCCC-CEEEEEeCCCccchh----hhhhh-----------cccCCCeEEEECCC
Confidence 356789999999999999999999998533 478888875321111 11100 00124688999999
Q ss_pred CCCCCCCCHHHHHHHh--cCCcEEEEcCcccCchH---HHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 113 ESEHLGLSEDSEQLIK--SKVNIIFHCAASLRFDE---ALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~--~~~d~vi~~aa~~~~~~---~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
.+. +.+..++ .++|+|||+|+...... +..+++++|+.++.+++++|++.+.++||||+
T Consensus 67 ~d~------~~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~ 130 (668)
T PLN02260 67 ASA------DLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHV 130 (668)
T ss_pred CCh------HHHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 997 5566554 57999999999865432 33467899999999999999998448999985
No 38
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.61 E-value=1.2e-14 Score=116.50 Aligned_cols=118 Identities=18% Similarity=0.295 Sum_probs=84.3
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
++++||||+||||+++++.|++.|+ ..+++.+|....... ..+... . ...++.++.+|+.+.
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~--~~v~~~~~~~~~~~~-~~~~~~-------------~-~~~~~~~~~~Dl~d~- 63 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETS--DAVVVVDKLTYAGNL-MSLAPV-------------A-QSERFAFEKVDICDR- 63 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCC--CEEEEEecCccccch-hhhhhc-------------c-cCCceEEEECCCcCh-
Confidence 6899999999999999999999984 224444443221111 111110 0 113578889999998
Q ss_pred CCCCHHHHHHHhc--CCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhc--------CCCCCceeC
Q psy17489 117 LGLSEDSEQLIKS--KVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKEC--------VNLKRFCEL 177 (177)
Q Consensus 117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~--------~~~~~~v~v 177 (177)
+.+..+++ ++|+|||+||..... ..+..++++|+.++.+++++|.+. +++++|||+
T Consensus 64 -----~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~ 132 (355)
T PRK10217 64 -----AELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHI 132 (355)
T ss_pred -----HHHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEe
Confidence 77888887 489999999976532 345678999999999999999762 256788874
No 39
>PLN02686 cinnamoyl-CoA reductase
Probab=99.60 E-value=1.2e-14 Score=117.35 Aligned_cols=126 Identities=18% Similarity=0.209 Sum_probs=90.8
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
..++|+|+||||+||||+++++.|++.| ++|+++.|+... .+.+..+... .+......++.++.+|+
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G---~~V~~~~r~~~~---~~~l~~l~~~-------~~~~~~~~~~~~v~~Dl 116 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHG---YSVRIAVDTQED---KEKLREMEMF-------GEMGRSNDGIWTVMANL 116 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHhhh-------ccccccCCceEEEEcCC
Confidence 3468899999999999999999999999 588877775421 1122111000 00000013578899999
Q ss_pred CCCCCCCCHHHHHHHhcCCcEEEEcCcccCchH---HHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 113 ESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDE---ALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~---~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
++. +.+..+++++|.|||+|+...... ....+.++|+.++.+++++|++.++++||||+
T Consensus 117 ~d~------~~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~ 178 (367)
T PLN02686 117 TEP------ESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFT 178 (367)
T ss_pred CCH------HHHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEe
Confidence 998 778888999999999999754321 22346788999999999999986479999985
No 40
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.59 E-value=1.4e-14 Score=119.35 Aligned_cols=111 Identities=27% Similarity=0.395 Sum_probs=82.5
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
++|+|+||||+||||++|++.|++.| .+|++++|..... .+.+...+ ...+++++.+|+.+
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G---~~V~~ld~~~~~~--~~~~~~~~--------------~~~~~~~i~~D~~~ 178 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARG---DSVIVVDNFFTGR--KENVMHHF--------------SNPNFELIRHDVVE 178 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCc---CEEEEEeCCCccc--hhhhhhhc--------------cCCceEEEECCccC
Confidence 56899999999999999999999999 5888887753211 11111111 12467888889876
Q ss_pred CCCCCCHHHHHHHhcCCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
. ++.++|+|||+|+.... ..+....+++|+.++.+++++|++. ++ +|||+
T Consensus 179 ~-----------~l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-g~-r~V~~ 231 (442)
T PLN02206 179 P-----------ILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLT 231 (442)
T ss_pred h-----------hhcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEE
Confidence 5 13578999999997542 2345668899999999999999998 65 78874
No 41
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.59 E-value=1.1e-14 Score=118.30 Aligned_cols=120 Identities=23% Similarity=0.350 Sum_probs=89.7
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
...+++++||||+|+||+++++.|++.| .+|++++|+............... ..+++.++.+|+
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G---~~V~~l~R~~~~~~~~~~~~~~~~-------------~~~~v~~v~~Dl 120 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRG---YNVVAVAREKSGIRGKNGKEDTKK-------------ELPGAEVVFGDV 120 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEEechhhccccchhhHHhh-------------hcCCceEEEeeC
Confidence 4567899999999999999999999998 589999997532110000000000 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc----CCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 113 ESEHLGLSEDSEQLIKS----KVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~----~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+|. +.+..+++ ++|+||||++.... .....+++|+.++.+++++|++. ++++||++
T Consensus 121 ~d~------~~l~~~~~~~~~~~D~Vi~~aa~~~~--~~~~~~~vn~~~~~~ll~aa~~~-gv~r~V~i 180 (390)
T PLN02657 121 TDA------DSLRKVLFSEGDPVDVVVSCLASRTG--GVKDSWKIDYQATKNSLDAGREV-GAKHFVLL 180 (390)
T ss_pred CCH------HHHHHHHHHhCCCCcEEEECCccCCC--CCccchhhHHHHHHHHHHHHHHc-CCCEEEEE
Confidence 998 78888877 59999999885321 12235688999999999999998 89999985
No 42
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.59 E-value=1.4e-14 Score=113.67 Aligned_cols=107 Identities=27% Similarity=0.430 Sum_probs=87.1
Q ss_pred eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCC
Q psy17489 38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHL 117 (177)
Q Consensus 38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 117 (177)
.|+||||+||||++++..|++.| +.|+.++|....... ....+.++.+|+.+.
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g---~~V~~~~r~~~~~~~----------------------~~~~~~~~~~d~~~~-- 54 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAG---HDVRGLDRLRDGLDP----------------------LLSGVEFVVLDLTDR-- 54 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCC---CeEEEEeCCCccccc----------------------cccccceeeecccch--
Confidence 49999999999999999999998 699999987643210 003578889999887
Q ss_pred CCCHHHHHHHhcCC-cEEEEcCcccCchHH----HHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489 118 GLSEDSEQLIKSKV-NIIFHCAASLRFDEA----LQKAIRANLYATKQMLNLAKECVNLKRFCE 176 (177)
Q Consensus 118 ~~~~~~~~~~~~~~-d~vi~~aa~~~~~~~----~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~ 176 (177)
+....+.+.+ |.|||+|+....... +..++++|+.++.+++++|++. ++++|||
T Consensus 55 ----~~~~~~~~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~-~~~~~v~ 113 (314)
T COG0451 55 ----DLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAA-GVKRFVF 113 (314)
T ss_pred ----HHHHHHHhcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEE
Confidence 5677777777 999999998764433 3358899999999999999996 9999997
No 43
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.59 E-value=4.1e-14 Score=112.52 Aligned_cols=117 Identities=15% Similarity=0.187 Sum_probs=86.6
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+++||||+||||+++++.|++.| .+|++++|...... ..+..... . ...++.++.+|+.+.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~~~~~~~~--~~~~~~~~----------~--~~~~~~~~~~Dl~d~- 62 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNG---HDVVILDNLCNSKR--SVLPVIER----------L--GGKHPTFVEGDIRNE- 62 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCC---CeEEEEecCCCchH--hHHHHHHH----------h--cCCCceEEEccCCCH-
Confidence 579999999999999999999998 57888776432211 11111100 0 013567889999987
Q ss_pred CCCCHHHHHHHhc--CCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 117 LGLSEDSEQLIKS--KVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+.+..+++ ++|+|||+|+.... .....+.+++|+.++.+++++|++. ++++||++
T Consensus 63 -----~~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~ 122 (338)
T PRK10675 63 -----ALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNLIFS 122 (338)
T ss_pred -----HHHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEe
Confidence 67777775 68999999987542 2234567899999999999999998 88899974
No 44
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.58 E-value=1.3e-14 Score=113.99 Aligned_cols=97 Identities=16% Similarity=0.105 Sum_probs=77.8
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+||||||+||||+++++.|++.| +|++++|... .+.+|+.|.
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g----~V~~~~~~~~--------------------------------~~~~Dl~d~- 43 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG----NLIALDVHST--------------------------------DYCGDFSNP- 43 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC----CEEEeccccc--------------------------------cccCCCCCH-
Confidence 579999999999999999999887 4777776421 245799987
Q ss_pred CCCCHHHHHHHhc--CCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 117 LGLSEDSEQLIKS--KVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+.+.++++ ++|+|||+||..... ...+..+++|+.++.+++++|++. ++ +|||+
T Consensus 44 -----~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~-g~-~~v~~ 102 (299)
T PRK09987 44 -----EGVAETVRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEV-GA-WVVHY 102 (299)
T ss_pred -----HHHHHHHHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEE
Confidence 77888877 589999999987543 234556799999999999999998 65 68874
No 45
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.57 E-value=3e-14 Score=112.47 Aligned_cols=110 Identities=24% Similarity=0.368 Sum_probs=89.6
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+++||||+||||+++++.|++.| ++|++++|++.... .+ ....+.++.+|+.+.
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g---~~V~~~~r~~~~~~---~~------------------~~~~~~~~~~D~~~~- 55 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQG---EEVRVLVRPTSDRR---NL------------------EGLDVEIVEGDLRDP- 55 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCC---CEEEEEEecCcccc---cc------------------ccCCceEEEeeCCCH-
Confidence 479999999999999999999998 58999998753210 00 013578899999998
Q ss_pred CCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 117 LGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+.+..+++++|+|||+|+.... ..+++..+++|+.++.++++++.+. ++++|||+
T Consensus 56 -----~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~ 111 (328)
T TIGR03466 56 -----ASLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEA-GVERVVYT 111 (328)
T ss_pred -----HHHHHHHhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 7888889999999999986432 3446678899999999999999998 88899874
No 46
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.57 E-value=5.1e-14 Score=107.92 Aligned_cols=119 Identities=18% Similarity=0.142 Sum_probs=84.7
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+|+||.++++.|++.| ++|++++|++.. . +++.+.+.. ...++.++++|++
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G---~~v~~~~r~~~~--~-~~~~~~~~~------------~~~~~~~~~~Dl~ 66 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAG---AAVAIADLNQDG--A-NAVADEINK------------AGGKAIGVAMDVT 66 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CeEEEEeCChHH--H-HHHHHHHHh------------cCceEEEEECCCC
Confidence 468999999999999999999999999 578888886521 1 122211110 1245788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHH----HHHHHHH-HhcCCCCCc
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYAT----KQMLNLA-KECVNLKRF 174 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~----~~ll~~~-~~~~~~~~~ 174 (177)
+. +.+..+++ ++|+|||+||.... .+.++..+++|+.++ ..+++.+ +.. +.++|
T Consensus 67 ~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~~~~i 139 (262)
T PRK13394 67 NE------DAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD-RGGVV 139 (262)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc-CCcEE
Confidence 98 55555443 48999999997532 355677889999994 4455555 444 67788
Q ss_pred eeC
Q psy17489 175 CEL 177 (177)
Q Consensus 175 v~v 177 (177)
|++
T Consensus 140 v~~ 142 (262)
T PRK13394 140 IYM 142 (262)
T ss_pred EEE
Confidence 874
No 47
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.57 E-value=3e-14 Score=117.26 Aligned_cols=111 Identities=27% Similarity=0.389 Sum_probs=82.2
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
..|+|+||||+||||++|++.|++.| .+|++++|..... ...+.... ...+++++.+|+.+
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G---~~V~~ldr~~~~~--~~~~~~~~--------------~~~~~~~~~~Di~~ 179 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRG---DEVIVIDNFFTGR--KENLVHLF--------------GNPRFELIRHDVVE 179 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCC---CEEEEEeCCCCcc--HhHhhhhc--------------cCCceEEEECcccc
Confidence 45799999999999999999999999 5889888753221 11111111 01357788888876
Q ss_pred CCCCCCHHHHHHHhcCCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
.. +.++|+|||+|+.... ..+...++++|+.++.+++++|++. ++ +|||+
T Consensus 180 ~~-----------~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-g~-r~V~~ 232 (436)
T PLN02166 180 PI-----------LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-RFLLT 232 (436)
T ss_pred cc-----------ccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEE
Confidence 51 3578999999997542 2345678899999999999999998 65 78874
No 48
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.57 E-value=7.7e-14 Score=108.05 Aligned_cols=114 Identities=15% Similarity=0.308 Sum_probs=85.4
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
.|+++||||+|+||+++++.|++.| ++|++++|+. +.+...... ...++.++.+|+++.
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g---~~v~~~~r~~------~~~~~~~~~------------~~~~~~~~~~D~~~~ 60 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARG---DRVAATVRRP------DALDDLKAR------------YGDRLWVLQLDVTDS 60 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHh------------ccCceEEEEccCCCH
Confidence 3689999999999999999999998 5888888864 222222110 124688899999998
Q ss_pred CCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCceeC
Q psy17489 116 HLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLA----KECVNLKRFCEL 177 (177)
Q Consensus 116 ~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~v 177 (177)
+++..++ .++|+|||+||.... .+.++..+++|+.++.++++.+ ++. +.++||++
T Consensus 61 ------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~ 133 (276)
T PRK06482 61 ------AAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQ-GGGRIVQV 133 (276)
T ss_pred ------HHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEE
Confidence 5555544 358999999997532 3456778899999999999987 444 66788874
No 49
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.56 E-value=3.8e-14 Score=113.44 Aligned_cols=118 Identities=19% Similarity=0.259 Sum_probs=84.4
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+|+||||+||||+++++.|++.|+ ..|+.+++....... ..+.... ...++.++.+|+++.
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~--~~v~~~~~~~~~~~~-~~~~~~~--------------~~~~~~~~~~Dl~d~- 62 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQ--DSVVNVDKLTYAGNL-ESLADVS--------------DSERYVFEHADICDR- 62 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCC--CeEEEecCCCccchH-HHHHhcc--------------cCCceEEEEecCCCH-
Confidence 4799999999999999999999984 245555543211111 1111100 113578899999998
Q ss_pred CCCCHHHHHHHhc--CCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhc--------CCCCCceeC
Q psy17489 117 LGLSEDSEQLIKS--KVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKEC--------VNLKRFCEL 177 (177)
Q Consensus 117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~--------~~~~~~v~v 177 (177)
+++..+++ ++|+|||+||.... ...++.++++|+.++.+++++|+++ +++++|||+
T Consensus 63 -----~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~ 131 (352)
T PRK10084 63 -----AELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHI 131 (352)
T ss_pred -----HHHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEe
Confidence 78888876 48999999997543 2335678999999999999999864 246688874
No 50
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.56 E-value=1.1e-13 Score=107.46 Aligned_cols=116 Identities=10% Similarity=0.095 Sum_probs=85.6
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
.+++++||||+|+||+++++.|++.| .+|++++|+.. .+..+... ...++.++.+|+++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G---~~V~~~~r~~~------~~~~l~~~------------~~~~~~~~~~D~~d 61 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAG---HRVVGTVRSEA------ARADFEAL------------HPDRALARLLDVTD 61 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCc---CEEEEEeCCHH------HHHHHHhh------------cCCCeeEEEccCCC
Confidence 46899999999999999999999999 68999998652 22221110 12467888999999
Q ss_pred CCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh---cCCCCCceeC
Q psy17489 115 EHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE---CVNLKRFCEL 177 (177)
Q Consensus 115 ~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~---~~~~~~~v~v 177 (177)
. +++..+++ ++|+|||+||.... .+.+...+++|+.++.++++.+.. ..+.++||++
T Consensus 62 ~------~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~i 135 (277)
T PRK06180 62 F------DAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNI 135 (277)
T ss_pred H------HHHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEE
Confidence 8 55555544 58999999997532 355677899999999999998543 1145577764
No 51
>PRK06398 aldose dehydrogenase; Validated
Probab=99.56 E-value=1e-13 Score=106.59 Aligned_cols=109 Identities=12% Similarity=0.170 Sum_probs=85.2
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+|+||.++++.|++.| ++|++++|+.... .++.++++|++
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G---~~Vi~~~r~~~~~--------------------------~~~~~~~~D~~ 54 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEG---SNVINFDIKEPSY--------------------------NDVDYFKVDVS 54 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeCCcccc--------------------------CceEEEEccCC
Confidence 568999999999999999999999999 5899988865321 35778999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE 176 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~ 176 (177)
++ +++..+++ ++|++|||||... ..++|+..+++|+.++..+++.+.+. .+..++|+
T Consensus 55 ~~------~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~ 128 (258)
T PRK06398 55 NK------EQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIIN 128 (258)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 98 55555443 6899999999743 24567888999999999998877542 14457776
Q ss_pred C
Q psy17489 177 L 177 (177)
Q Consensus 177 v 177 (177)
+
T Consensus 129 i 129 (258)
T PRK06398 129 I 129 (258)
T ss_pred e
Confidence 4
No 52
>PRK06182 short chain dehydrogenase; Validated
Probab=99.55 E-value=1.2e-13 Score=106.82 Aligned_cols=112 Identities=13% Similarity=0.250 Sum_probs=83.7
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
++++++||||+|+||.++++.|++.| ++|++++|+. +.+..... .++.++.+|+++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G---~~V~~~~r~~------~~l~~~~~---------------~~~~~~~~Dv~~ 57 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQG---YTVYGAARRV------DKMEDLAS---------------LGVHPLSLDVTD 57 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHh---------------CCCeEEEeeCCC
Confidence 47899999999999999999999999 5899988865 22222211 247789999999
Q ss_pred CCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHH----HHHhcCCCCCcee
Q psy17489 115 EHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLN----LAKECVNLKRFCE 176 (177)
Q Consensus 115 ~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~----~~~~~~~~~~~v~ 176 (177)
. +.+..+++ ++|++||+||.... .+.++..+++|+.++..+++ .+++. +..++|+
T Consensus 58 ~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~ 130 (273)
T PRK06182 58 E------ASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ-RSGRIIN 130 (273)
T ss_pred H------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc-CCCEEEE
Confidence 8 56666554 78999999997542 35677789999998666555 44555 5667776
Q ss_pred C
Q psy17489 177 L 177 (177)
Q Consensus 177 v 177 (177)
+
T Consensus 131 i 131 (273)
T PRK06182 131 I 131 (273)
T ss_pred E
Confidence 4
No 53
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.55 E-value=2.3e-14 Score=108.04 Aligned_cols=109 Identities=28% Similarity=0.455 Sum_probs=87.2
Q ss_pred EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489 39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG 118 (177)
Q Consensus 39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 118 (177)
|+||||+||||++++++|++.| ..|+.+.|++..... .. ...++.++.+|+.+.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g---~~v~~~~~~~~~~~~----~~----------------~~~~~~~~~~dl~~~--- 54 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKG---HEVIVLSRSSNSESF----EE----------------KKLNVEFVIGDLTDK--- 54 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT---TEEEEEESCSTGGHH----HH----------------HHTTEEEEESETTSH---
T ss_pred EEEEccCCHHHHHHHHHHHHcC---Ccccccccccccccc----cc----------------ccceEEEEEeecccc---
Confidence 7999999999999999999999 578888887643211 00 012789999999987
Q ss_pred CCHHHHHHHhcC--CcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 119 LSEDSEQLIKSK--VNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 119 ~~~~~~~~~~~~--~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+.+.++++. +|.|||+|+.... .......++.|+.++.+++++|++. ++++|||+
T Consensus 55 ---~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~ 114 (236)
T PF01370_consen 55 ---EQLEKLLEKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREA-GVKRFIFL 114 (236)
T ss_dssp ---HHHHHHHHHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred ---ccccccccccCceEEEEeeccccccccccccccccccccccccccccccccc-cccccccc
Confidence 788888875 5999999998542 2344567899999999999999998 88999874
No 54
>PRK05717 oxidoreductase; Validated
Probab=99.55 E-value=1.9e-13 Score=104.71 Aligned_cols=110 Identities=12% Similarity=0.050 Sum_probs=81.9
Q ss_pred cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489 31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS 110 (177)
Q Consensus 31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 110 (177)
...++||+++||||+|+||+++++.|++.| .+|++++|+... ....... ...++.++.+
T Consensus 5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g---~~v~~~~~~~~~------~~~~~~~------------~~~~~~~~~~ 63 (255)
T PRK05717 5 NPGHNGRVALVTGAARGIGLGIAAWLIAEG---WQVVLADLDRER------GSKVAKA------------LGENAWFIAM 63 (255)
T ss_pred CcccCCCEEEEeCCcchHHHHHHHHHHHcC---CEEEEEcCCHHH------HHHHHHH------------cCCceEEEEc
Confidence 345678999999999999999999999998 588888875421 1111110 1246788999
Q ss_pred CCCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC---------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 111 NLESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR---------FDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 111 D~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
|+++. +++..++ .++|++||+||... ..++++..+++|+.++.++++++.+
T Consensus 64 Dl~~~------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 130 (255)
T PRK05717 64 DVADE------AQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAP 130 (255)
T ss_pred cCCCH------HHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 99997 4544432 35899999999753 1345778899999999999999864
No 55
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.55 E-value=1.5e-13 Score=105.21 Aligned_cols=112 Identities=16% Similarity=0.296 Sum_probs=84.3
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+.+++++||||+++||..+++.|.++| ++++.++|+. +++.++.++ +. ......+.++++|+
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g---~~liLvaR~~------~kL~~la~~-----l~---~~~~v~v~vi~~DL 65 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRG---YNLILVARRE------DKLEALAKE-----LE---DKTGVEVEVIPADL 65 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCcH------HHHHHHHHH-----HH---HhhCceEEEEECcC
Confidence 4578899999999999999999999999 6999999986 333333221 00 00124678999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+++ +++..+.. .+|++|||||...+ .+..++++++|+.+...|.++...
T Consensus 66 s~~------~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp 128 (265)
T COG0300 66 SDP------EALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLP 128 (265)
T ss_pred CCh------hHHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998 55655543 58999999998643 345567899999999988877643
No 56
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.55 E-value=1.7e-13 Score=104.27 Aligned_cols=120 Identities=14% Similarity=0.131 Sum_probs=88.1
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
++++|+++||||+|++|.++++.|+++| ++|++++|+... ........ . ....++.++.+|+
T Consensus 3 ~~~~~~ilItGasg~iG~~l~~~l~~~g---~~V~~~~r~~~~--~~~~~~~l-~------------~~~~~~~~~~~Dl 64 (251)
T PRK12826 3 DLEGRVALVTGAARGIGRAIAVRLAADG---AEVIVVDICGDD--AAATAELV-E------------AAGGKARARQVDV 64 (251)
T ss_pred CCCCCEEEEcCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHH--HHHHHHHH-H------------hcCCeEEEEECCC
Confidence 3567899999999999999999999999 589999987521 11111111 1 0124588899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCc
Q psy17489 113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAK----ECVNLKRF 174 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~ 174 (177)
.+. +++..+++ .+|+|||+++.... .+++...+++|+.++.++++.+. +. +.++|
T Consensus 65 ~~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~i 137 (251)
T PRK12826 65 RDR------AALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRA-GGGRI 137 (251)
T ss_pred CCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEE
Confidence 997 56666554 68999999987542 34667789999999999998874 33 56677
Q ss_pred eeC
Q psy17489 175 CEL 177 (177)
Q Consensus 175 v~v 177 (177)
|++
T Consensus 138 i~~ 140 (251)
T PRK12826 138 VLT 140 (251)
T ss_pred EEE
Confidence 764
No 57
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.55 E-value=1.6e-13 Score=105.10 Aligned_cols=120 Identities=13% Similarity=0.152 Sum_probs=87.9
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+|+||.+++++|++.| ++|++++|++.. . +.+.+.+.. ...++.++.+|+.
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~i~~------------~~~~~~~~~~D~~ 69 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAG---AEVILNGRDPAK--L-AAAAESLKG------------QGLSAHALAFDVT 69 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcC---CEEEEEeCCHHH--H-HHHHHHHHh------------cCceEEEEEccCC
Confidence 578999999999999999999999999 588888886421 1 111111110 1245788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE 176 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~ 176 (177)
+. +++..+++ ++|++||+||... ..+.+++.+++|+.++.++++.+.+. .+.++||+
T Consensus 70 ~~------~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~ 143 (255)
T PRK07523 70 DH------DAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIIN 143 (255)
T ss_pred CH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEE
Confidence 98 56666554 5899999999753 23566778999999999999988643 14567776
Q ss_pred C
Q psy17489 177 L 177 (177)
Q Consensus 177 v 177 (177)
+
T Consensus 144 i 144 (255)
T PRK07523 144 I 144 (255)
T ss_pred E
Confidence 4
No 58
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.54 E-value=1.3e-13 Score=105.35 Aligned_cols=119 Identities=17% Similarity=0.123 Sum_probs=85.7
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+|+||++++++|++.| .+|++++|++... +.+..... ....++.++.+|+.
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g---~~v~~~~r~~~~~---~~~~~~~~------------~~~~~~~~~~~Dl~ 63 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEG---AKVVIADLNDEAA---AAAAEALQ------------KAGGKAIGVAMDVT 63 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeCCHHHH---HHHHHHHH------------hcCCcEEEEEcCCC
Confidence 467899999999999999999999999 5899999875321 11111111 01256888999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCce
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLA----KECVNLKRFC 175 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v 175 (177)
+. +++..+++ ++|+|||+|+.... ...++..+++|+.++..+++.+ ++. +.++||
T Consensus 64 ~~------~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv 136 (258)
T PRK12429 64 DE------EAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ-GGGRII 136 (258)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCeEEE
Confidence 98 56655544 68999999996432 3456678899999977666655 444 677888
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
|+
T Consensus 137 ~i 138 (258)
T PRK12429 137 NM 138 (258)
T ss_pred EE
Confidence 74
No 59
>PRK06194 hypothetical protein; Provisional
Probab=99.54 E-value=1.9e-13 Score=106.31 Aligned_cols=108 Identities=9% Similarity=0.069 Sum_probs=80.3
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+|+||+++++.|++.| ++|++++|+... . ++..+... ....++.++.+|++
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~------------~~~~~~~~~~~D~~ 65 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALG---MKLVLADVQQDA--L-DRAVAELR------------AQGAEVLGVRTDVS 65 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCC---CEEEEEeCChHH--H-HHHHHHHH------------hcCCeEEEEECCCC
Confidence 457899999999999999999999999 588888886421 1 11111111 01246788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHH
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLA 165 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~ 165 (177)
+. +++..+++ ++|+|||+||.... .+.++..+++|+.++.++++.+
T Consensus 66 d~------~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~ 125 (287)
T PRK06194 66 DA------AQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAF 125 (287)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHH
Confidence 98 56666554 58999999998542 3567778999999999987774
No 60
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.54 E-value=1e-13 Score=106.99 Aligned_cols=110 Identities=15% Similarity=0.187 Sum_probs=86.0
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
++++++||||+|+||.++++.|++.| ++|++++|+..... ...++.++++|++|
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g---~~V~~~~r~~~~~~-----------------------~~~~~~~~~~D~~d 56 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAG---YRVFGTSRNPARAA-----------------------PIPGVELLELDVTD 56 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCC---CEEEEEeCChhhcc-----------------------ccCCCeeEEeecCC
Confidence 46799999999999999999999999 58999998753210 11467889999999
Q ss_pred CCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCcee
Q psy17489 115 EHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLA----KECVNLKRFCE 176 (177)
Q Consensus 115 ~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~ 176 (177)
. +++..+++ ++|++|||||... ..+.++..+++|+.++.++++.+ ++. +.++||+
T Consensus 57 ~------~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~ 129 (270)
T PRK06179 57 D------ASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQ-GSGRIIN 129 (270)
T ss_pred H------HHHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEE
Confidence 8 66666654 5799999999753 23567788999999999998875 444 6678876
Q ss_pred C
Q psy17489 177 L 177 (177)
Q Consensus 177 v 177 (177)
+
T Consensus 130 i 130 (270)
T PRK06179 130 I 130 (270)
T ss_pred E
Confidence 4
No 61
>PRK07985 oxidoreductase; Provisional
Probab=99.54 E-value=6.2e-13 Score=104.24 Aligned_cols=123 Identities=19% Similarity=0.192 Sum_probs=86.4
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+++|+++||||+|+||.++++.|++.| ++|++.+|+...... +.+.+.... ...++.++.+|+
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G---~~Vi~~~~~~~~~~~-~~~~~~~~~------------~~~~~~~~~~Dl 109 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREG---ADVAISYLPVEEEDA-QDVKKIIEE------------CGRKAVLLPGDL 109 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCC---CEEEEecCCcchhhH-HHHHHHHHH------------cCCeEEEEEccC
Confidence 3678999999999999999999999999 578877665432221 222222211 124577899999
Q ss_pred CCCCCCCCHHHHHHH-------hcCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCcee
Q psy17489 113 ESEHLGLSEDSEQLI-------KSKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC-VNLKRFCE 176 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~-------~~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~ 176 (177)
++. +++..+ +.++|++||+||... ..++|+..+++|+.++.++++.+... ..-.+||+
T Consensus 110 ~~~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~ 183 (294)
T PRK07985 110 SDE------KFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIIT 183 (294)
T ss_pred CCH------HHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEE
Confidence 997 455444 346899999998632 13567888999999999999988653 11246665
Q ss_pred C
Q psy17489 177 L 177 (177)
Q Consensus 177 v 177 (177)
+
T Consensus 184 i 184 (294)
T PRK07985 184 T 184 (294)
T ss_pred E
Confidence 3
No 62
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.54 E-value=1.4e-13 Score=127.05 Aligned_cols=137 Identities=26% Similarity=0.394 Sum_probs=105.1
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhC-CCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSF-PDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g-~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
..++|+||||+||+|++++..|++.+ ....+|+++.|........+++.+...+... .. .....++.++.+|+.
T Consensus 970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~--~~---~~~~~~i~~~~gDl~ 1044 (1389)
T TIGR03443 970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGI--WD---EEWASRIEVVLGDLS 1044 (1389)
T ss_pred CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCC--Cc---hhhhcceEEEeccCC
Confidence 35789999999999999999999876 1236899999976544333444433222111 00 111247899999999
Q ss_pred CCCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
++.+++..+.+..+..++|+|||+|+..+...++..+...|+.++.+++++|.+. ++++|+|+
T Consensus 1045 ~~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~v 1107 (1389)
T TIGR03443 1045 KEKFGLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEG-KAKQFSFV 1107 (1389)
T ss_pred CccCCcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhC-CCceEEEE
Confidence 9988888888888888999999999998766666667788999999999999987 88899885
No 63
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.53 E-value=2.8e-13 Score=101.49 Aligned_cols=108 Identities=11% Similarity=0.152 Sum_probs=84.9
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
.++|.++||||+++||.++++.|.+.| ++|+..+|+. ++++.+..+ ..+ ..+..+..|++
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G---~~vvl~aRR~------drL~~la~~---------~~~--~~~~~~~~DVt 63 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAG---AKVVLAARRE------ERLEALADE---------IGA--GAALALALDVT 63 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCC---CeEEEEeccH------HHHHHHHHh---------hcc--CceEEEeeccC
Confidence 467899999999999999999999999 6999999986 444444332 111 46788999999
Q ss_pred CCCCCCCHHHHHHH-------hcCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 114 SEHLGLSEDSEQLI-------KSKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 114 ~~~~~~~~~~~~~~-------~~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
|. +++..+ +.++|++|||||... ..++|+.++++|+.|..+..++...
T Consensus 64 D~------~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP 125 (246)
T COG4221 64 DR------AAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLP 125 (246)
T ss_pred CH------HHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 98 453333 447999999999743 2578999999999999999887643
No 64
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.53 E-value=2.6e-13 Score=105.33 Aligned_cols=112 Identities=15% Similarity=0.235 Sum_probs=81.8
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
.+++++||||+|+||.++++.|.+.| .+|++++|+.. .+..+.. ..+.++.+|+++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G---~~Vi~~~r~~~------~~~~l~~---------------~~~~~~~~Dl~d 58 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDG---WRVFATCRKEE------DVAALEA---------------EGLEAFQLDYAE 58 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHH------HHHHHHH---------------CCceEEEccCCC
Confidence 46799999999999999999999998 58999998752 2222211 246788999999
Q ss_pred CCCCCCHHHHHHHhc--------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHH----HHHHHHhcCCCCCce
Q psy17489 115 EHLGLSEDSEQLIKS--------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQ----MLNLAKECVNLKRFC 175 (177)
Q Consensus 115 ~~~~~~~~~~~~~~~--------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~----ll~~~~~~~~~~~~v 175 (177)
. +++..+++ ++|++|||||.... .+.++..+++|+.++.. +++.+++. +..+||
T Consensus 59 ~------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~-~~g~iv 131 (277)
T PRK05993 59 P------ESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ-GQGRIV 131 (277)
T ss_pred H------HHHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-CCCEEE
Confidence 7 45544432 57999999987532 34567789999999554 45555565 667888
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
++
T Consensus 132 ~i 133 (277)
T PRK05993 132 QC 133 (277)
T ss_pred EE
Confidence 74
No 65
>KOG1430|consensus
Probab=99.53 E-value=4.2e-14 Score=112.39 Aligned_cols=120 Identities=26% Similarity=0.353 Sum_probs=92.5
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
.++.+++||||+||+|.|++++|++++. ...|++++.........++... ....++.++.+|+.
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~-~~~irv~D~~~~~~~~~~e~~~---------------~~~~~v~~~~~D~~ 65 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENEL-KLEIRVVDKTPTQSNLPAELTG---------------FRSGRVTVILGDLL 65 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhccc-ccEEEEeccCccccccchhhhc---------------ccCCceeEEecchh
Confidence 3567999999999999999999999974 4688888887642211111110 01367899999999
Q ss_pred CCCCCCCHHHHHHHhcCCcEEEEcCcccC--c-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 114 SEHLGLSEDSEQLIKSKVNIIFHCAASLR--F-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~--~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+. ..+..++.++ .|+|+|+... . ..+.+..+++|+.||.+++++|.+. +++++||.
T Consensus 66 ~~------~~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-~v~~lIYt 124 (361)
T KOG1430|consen 66 DA------NSISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-GVKRLIYT 124 (361)
T ss_pred hh------hhhhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHh-CCCEEEEe
Confidence 98 6888999999 7788777532 1 2346668899999999999999999 99999984
No 66
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.52 E-value=3e-13 Score=107.22 Aligned_cols=120 Identities=17% Similarity=0.148 Sum_probs=86.0
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
..+++++||||+|+||.++++.|++.| .+|++++|+.. +....... + .....++.++.+|++
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G---~~V~~~~r~~~------~~~~~~~~-----l----~~~~~~~~~~~~Dl~ 65 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRG---WHVIMACRNLK------KAEAAAQE-----L----GIPPDSYTIIHIDLG 65 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCC---CEEEEEECCHH------HHHHHHHH-----h----hccCCceEEEEecCC
Confidence 357899999999999999999999998 68999888642 11111110 0 001246888999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHh----cC-CCCC
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKE----CV-NLKR 173 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~~ 173 (177)
+. +++..+++ ++|++|||||... ..+.++..+++|+.++.++++.+.. .+ +..|
T Consensus 66 ~~------~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~r 139 (322)
T PRK07453 66 DL------DSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPR 139 (322)
T ss_pred CH------HHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCce
Confidence 98 56655543 4899999999642 1246778899999999999888764 21 1347
Q ss_pred ceeC
Q psy17489 174 FCEL 177 (177)
Q Consensus 174 ~v~v 177 (177)
+|++
T Consensus 140 iV~v 143 (322)
T PRK07453 140 LVIL 143 (322)
T ss_pred EEEE
Confidence 8764
No 67
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.52 E-value=3.1e-13 Score=102.95 Aligned_cols=120 Identities=16% Similarity=0.179 Sum_probs=86.0
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+|+||.++++.|++.| .+|++++|+.... +.+.+...+ ...++.++.+|++
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g---~~vi~~~r~~~~~---~~~~~~~~~------------~~~~~~~~~~Dl~ 65 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREG---ASVVVADINAEGA---ERVAKQIVA------------DGGTAIAVQVDVS 65 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHHHh------------cCCcEEEEEcCCC
Confidence 467899999999999999999999999 5899998864211 222221110 1235778899999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC----------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCC
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR----------FDEALQKAIRANLYATKQMLNLAKEC---VNLKR 173 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~----------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~ 173 (177)
+. +++..+++ .+|+|||+||... ..+.+++.+++|+.++.++++++.+. .+.++
T Consensus 66 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 139 (250)
T PRK07774 66 DP------DSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGA 139 (250)
T ss_pred CH------HHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcE
Confidence 98 55554433 6899999999742 12456678999999999999987653 13457
Q ss_pred ceeC
Q psy17489 174 FCEL 177 (177)
Q Consensus 174 ~v~v 177 (177)
||++
T Consensus 140 iv~~ 143 (250)
T PRK07774 140 IVNQ 143 (250)
T ss_pred EEEE
Confidence 7753
No 68
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.52 E-value=3.3e-13 Score=103.91 Aligned_cols=120 Identities=13% Similarity=0.160 Sum_probs=87.0
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+|+||.++++.|++.| ++|++++|+... . +.+..... ....++.++.+|++
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G---~~Vi~~~r~~~~--~-~~~~~~l~------------~~~~~~~~~~~D~~ 69 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAG---ADVLIAARTESQ--L-DEVAEQIR------------AAGRRAHVVAADLA 69 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHH------------hcCCcEEEEEccCC
Confidence 568999999999999999999999999 589999986421 1 11111111 01246788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc----CCCCCce
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC----VNLKRFC 175 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v 175 (177)
++ +.+..+++ ++|+|||+||... ..+.++..+++|+.++.++.+++.+. .+..+||
T Consensus 70 ~~------~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv 143 (263)
T PRK07814 70 HP------EATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVI 143 (263)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEE
Confidence 98 55655443 6899999998632 13567778999999999999998642 1445676
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
++
T Consensus 144 ~~ 145 (263)
T PRK07814 144 NI 145 (263)
T ss_pred EE
Confidence 53
No 69
>PLN02253 xanthoxin dehydrogenase
Probab=99.52 E-value=3e-13 Score=104.92 Aligned_cols=110 Identities=15% Similarity=0.106 Sum_probs=82.4
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+++|+++||||+|+||.++++.|++.| ++|++++|+... . +.+.+.. . ...++.++++|+
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G---~~v~~~~~~~~~--~-~~~~~~~------------~-~~~~~~~~~~Dl 75 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHG---AKVCIVDLQDDL--G-QNVCDSL------------G-GEPNVCFFHCDV 75 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcC---CEEEEEeCCHHH--H-HHHHHHh------------c-CCCceEEEEeec
Confidence 4578999999999999999999999999 588888875421 1 1111110 0 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc---------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF---------DEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~---------~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
++. +++..+++ ++|++||+||.... .++++..+++|+.++.++++++.+
T Consensus 76 ~d~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 140 (280)
T PLN02253 76 TVE------DDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAAR 140 (280)
T ss_pred CCH------HHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHH
Confidence 998 56666554 68999999997421 356778899999999999887754
No 70
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.52 E-value=4.5e-13 Score=103.84 Aligned_cols=115 Identities=10% Similarity=0.207 Sum_probs=85.0
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
.+++++||||+|+||+++++.|++.| .+|++++|+.. .+...... ...++.++.+|+++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g---~~V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~D~~~ 60 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERG---DRVVATARDTA------TLADLAEK------------YGDRLLPLALDVTD 60 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEECCHH------HHHHHHHh------------ccCCeeEEEccCCC
Confidence 46799999999999999999999998 58999888642 22221110 12457788999999
Q ss_pred CCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCcee
Q psy17489 115 EHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLA----KECVNLKRFCE 176 (177)
Q Consensus 115 ~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~ 176 (177)
. +++..++ .++|++||+||.... .++++..+++|+.++..+++.+ ++. +.+++|+
T Consensus 61 ~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~ 133 (275)
T PRK08263 61 R------AAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQ-RSGHIIQ 133 (275)
T ss_pred H------HHHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEE
Confidence 7 4554443 367999999997532 3577889999999998888876 344 5667876
Q ss_pred C
Q psy17489 177 L 177 (177)
Q Consensus 177 v 177 (177)
+
T Consensus 134 v 134 (275)
T PRK08263 134 I 134 (275)
T ss_pred E
Confidence 4
No 71
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.52 E-value=4.5e-13 Score=102.86 Aligned_cols=123 Identities=13% Similarity=0.115 Sum_probs=87.5
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+++|+++||||+|+||.++++.|++.| ++|++++|++.. . +.+.+.+.. .....++.++.+|+
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G---~~vv~~~r~~~~--~-~~~~~~~~~----------~~~~~~~~~~~~Dl 67 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREG---AAVALADLDAAL--A-ERAAAAIAR----------DVAGARVLAVPADV 67 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHh----------ccCCceEEEEEccC
Confidence 3678999999999999999999999999 589988886421 1 111111110 00124678899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489 113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFC 175 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v 175 (177)
+++ +++..+++ ++|++||+||... ..++|+..+++|+.++..+++.+... .+..++|
T Consensus 68 ~~~------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv 141 (260)
T PRK07063 68 TDA------ASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIV 141 (260)
T ss_pred CCH------HHHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEE
Confidence 998 55555443 6899999999642 13577888999999999998887531 1345676
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
++
T Consensus 142 ~i 143 (260)
T PRK07063 142 NI 143 (260)
T ss_pred EE
Confidence 63
No 72
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.52 E-value=2.7e-13 Score=104.06 Aligned_cols=120 Identities=16% Similarity=0.246 Sum_probs=87.3
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+++|+++||||+|+||.++++.|++.| ++|++++|++.. +.+.+.... ...++.++.+|+
T Consensus 12 ~l~~k~vlItGas~gIG~~ia~~l~~~G---~~v~~~~~~~~~----~~~~~~~~~------------~~~~~~~~~~D~ 72 (258)
T PRK06935 12 SLDGKVAIVTGGNTGLGQGYAVALAKAG---ADIIITTHGTNW----DETRRLIEK------------EGRKVTFVQVDL 72 (258)
T ss_pred cCCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCcHH----HHHHHHHHh------------cCCceEEEEcCC
Confidence 4678999999999999999999999999 588888886211 222222211 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489 113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFC 175 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v 175 (177)
++. +.+..+++ ++|++||+||... ..+.++..+++|+.++..+.+.+.+. .+..++|
T Consensus 73 ~~~------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv 146 (258)
T PRK06935 73 TKP------ESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKII 146 (258)
T ss_pred CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEE
Confidence 998 55655544 6899999999743 14567788999999998888776532 1445676
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
++
T Consensus 147 ~i 148 (258)
T PRK06935 147 NI 148 (258)
T ss_pred EE
Confidence 64
No 73
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.52 E-value=2.6e-13 Score=104.07 Aligned_cols=119 Identities=13% Similarity=0.154 Sum_probs=83.4
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+++|+++||||+|+||.++++.|++.| .+|++++|++. . ..+.+.+. ....++.++.+|+
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G---~~v~~~~r~~~---~-~~~~~~~~------------~~~~~~~~~~~D~ 65 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEG---ARVVLVDRSEL---V-HEVAAELR------------AAGGEALALTADL 65 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCchH---H-HHHHHHHH------------hcCCeEEEEEEeC
Confidence 4678999999999999999999999999 58888888632 1 11111111 0124577889999
Q ss_pred CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCC
Q psy17489 113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAK----ECVNLKR 173 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~ 173 (177)
++. +++..++ .++|++|||||... ..+.++..+++|+.++..+++.+. +. +..+
T Consensus 66 ~~~------~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~ 138 (260)
T PRK12823 66 ETY------AGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQ-GGGA 138 (260)
T ss_pred CCH------HHHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCe
Confidence 997 4454443 36899999998531 135567788999999887766554 33 4567
Q ss_pred ceeC
Q psy17489 174 FCEL 177 (177)
Q Consensus 174 ~v~v 177 (177)
||++
T Consensus 139 iv~~ 142 (260)
T PRK12823 139 IVNV 142 (260)
T ss_pred EEEE
Confidence 7764
No 74
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.52 E-value=3.4e-13 Score=102.23 Aligned_cols=120 Identities=13% Similarity=0.188 Sum_probs=87.1
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+|+||.+++++|++.| .+|++++|+... . +.+.+... ....++.++.+|+.
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G---~~Vi~~~r~~~~--~-~~~~~~~~------------~~~~~~~~~~~D~~ 66 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKEG---VNVGLLARTEEN--L-KAVAEEVE------------AYGVKVVIATADVS 66 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHH------------HhCCeEEEEECCCC
Confidence 457899999999999999999999999 589999987521 1 11111111 01246888999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE 176 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~ 176 (177)
++ +++..+++ ++|++||++|.... .+.+++.+++|+.++.++++.+... .+.+++|+
T Consensus 67 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 140 (239)
T PRK07666 67 DY------EEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIIN 140 (239)
T ss_pred CH------HHHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEE
Confidence 98 56666554 78999999987432 3556778999999999998887642 14556776
Q ss_pred C
Q psy17489 177 L 177 (177)
Q Consensus 177 v 177 (177)
+
T Consensus 141 ~ 141 (239)
T PRK07666 141 I 141 (239)
T ss_pred E
Confidence 3
No 75
>KOG1205|consensus
Probab=99.52 E-value=1.3e-13 Score=106.23 Aligned_cols=112 Identities=18% Similarity=0.267 Sum_probs=83.5
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHH-HHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERV-KNMLNSVIFDRLNKEVPDFRSKIQVIPSN 111 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~D 111 (177)
.+.||+|+||||+++||.+++..|.+.| .+++.++|..... +++ +++.+. .+ . .++..+++|
T Consensus 9 ~~~~kvVvITGASsGIG~~lA~~la~~G---~~l~lvar~~rrl---~~v~~~l~~~---------~~-~-~~v~~~~~D 71 (282)
T KOG1205|consen 9 RLAGKVVLITGASSGIGEALAYELAKRG---AKLVLVARRARRL---ERVAEELRKL---------GS-L-EKVLVLQLD 71 (282)
T ss_pred HhCCCEEEEeCCCcHHHHHHHHHHHhCC---CceEEeehhhhhH---HHHHHHHHHh---------CC-c-CccEEEeCc
Confidence 4679999999999999999999999999 6777777765332 333 222110 11 1 168999999
Q ss_pred CCCCCCCCCHHHHHHH-------hcCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 112 LESEHLGLSEDSEQLI-------KSKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 112 ~~~~~~~~~~~~~~~~-------~~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
++|. ++.+++ +.++|++|||||.... ..+....+++|+.|+..+.+++..
T Consensus 72 vs~~------~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp 135 (282)
T KOG1205|consen 72 VSDE------ESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALP 135 (282)
T ss_pred cCCH------HHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHH
Confidence 9998 566644 4589999999998542 345566899999999999888754
No 76
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.51 E-value=6.4e-13 Score=100.93 Aligned_cols=123 Identities=13% Similarity=0.152 Sum_probs=87.3
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+|+||.++++.|+++| ++|++++|...... +........ + .....++.++.+|+.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g---~~v~~~~~~~~~~~--~~~~~~~~~-----~----~~~~~~~~~~~~Dl~ 69 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADG---ADVIVLDIHPMRGR--AEADAVAAG-----I----EAAGGKALGLAFDVR 69 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCC---CeEEEEcCcccccH--HHHHHHHHH-----H----HhcCCcEEEEEccCC
Confidence 457899999999999999999999999 57888776432111 122211110 0 012346889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH-----hcCCCCCc
Q psy17489 114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK-----ECVNLKRF 174 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~-----~~~~~~~~ 174 (177)
+. +.+..++ .++|+|||+||... ..+.+...+++|+.++.++++++. +. +.++|
T Consensus 70 ~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i 142 (249)
T PRK12827 70 DF------AATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRAR-RGGRI 142 (249)
T ss_pred CH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CCeEE
Confidence 98 5665554 36899999999754 135577789999999999999987 33 55677
Q ss_pred eeC
Q psy17489 175 CEL 177 (177)
Q Consensus 175 v~v 177 (177)
|++
T Consensus 143 v~~ 145 (249)
T PRK12827 143 VNI 145 (249)
T ss_pred EEE
Confidence 764
No 77
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.51 E-value=3.3e-13 Score=102.77 Aligned_cols=119 Identities=17% Similarity=0.224 Sum_probs=86.2
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+|+||+++++.|++.| .+|++++|+... . ..+.+... ....++.++.+|+.
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g---~~v~~~~r~~~~--~-~~~~~~~~------------~~~~~~~~~~~d~~ 62 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEG---AKVAVFDLNREA--A-EKVAADIR------------AKGGNAQAFACDIT 62 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEecCCHHH--H-HHHHHHHH------------hcCCcEEEEEcCCC
Confidence 357899999999999999999999998 588888886521 1 11211111 01246889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCce
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRFC 175 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v 175 (177)
+. ++++.+++ ++|++||+|+... ..+.++..+++|+.++.++++.+. +. +.++||
T Consensus 63 ~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii 135 (250)
T TIGR03206 63 DR------DSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER-GAGRIV 135 (250)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEE
Confidence 87 56655543 5899999998642 134566789999999999988775 34 556777
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
++
T Consensus 136 ~i 137 (250)
T TIGR03206 136 NI 137 (250)
T ss_pred EE
Confidence 64
No 78
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.51 E-value=2.3e-13 Score=107.09 Aligned_cols=122 Identities=11% Similarity=0.096 Sum_probs=83.9
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+++|+++||||+|+||.++++.|++.| .+|++++|+... ..+...++.. .. ...++.++.+|+
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~G---~~vi~~~r~~~~--~~~~~~~l~~---------~~--~~~~~~~~~~Dl 76 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAKG---AHVVLAVRNLDK--GKAAAARITA---------AT--PGADVTLQELDL 76 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHH--HHHHHHHHHH---------hC--CCCceEEEECCC
Confidence 3578999999999999999999999999 588888886421 1111111110 00 124678899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-----hHHHHHHHHHhHHHHHHH----HHHHHhcCCCCCcee
Q psy17489 113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-----DEALQKAIRANLYATKQM----LNLAKECVNLKRFCE 176 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-----~~~~~~~~~~nv~~~~~l----l~~~~~~~~~~~~v~ 176 (177)
++. +++..+++ ++|++|||||.... .+.++..+++|+.++..+ ++.+++. +..+||+
T Consensus 77 ~d~------~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~ 149 (306)
T PRK06197 77 TSL------ASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-PGSRVVT 149 (306)
T ss_pred CCH------HHHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEE
Confidence 998 55555443 68999999997432 235567789999995554 4445554 4568887
Q ss_pred C
Q psy17489 177 L 177 (177)
Q Consensus 177 v 177 (177)
+
T Consensus 150 v 150 (306)
T PRK06197 150 V 150 (306)
T ss_pred E
Confidence 4
No 79
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.51 E-value=3.6e-13 Score=103.34 Aligned_cols=120 Identities=17% Similarity=0.177 Sum_probs=86.3
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+|+||.++++.|++.| .+|+.++|+... . +...+.+. ....++.++.+|++
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G---~~V~~~~r~~~~--~-~~~~~~i~------------~~~~~~~~~~~Dl~ 71 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAG---ARVVLSARKAEE--L-EEAAAHLE------------ALGIDALWIAADVA 71 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcC---CEEEEEeCCHHH--H-HHHHHHHH------------hcCCeEEEEEccCC
Confidence 468999999999999999999999998 588888886421 1 11111111 01246788999999
Q ss_pred CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc----CCCCCce
Q psy17489 114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC----VNLKRFC 175 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v 175 (177)
++ +.+..++ .++|++||+||... ..+.+++.+++|+.++.++++++.+. ++..+||
T Consensus 72 d~------~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v 145 (259)
T PRK08213 72 DE------ADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRII 145 (259)
T ss_pred CH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEE
Confidence 98 5665443 35899999999642 23567778999999999999977543 2445777
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
++
T Consensus 146 ~~ 147 (259)
T PRK08213 146 NV 147 (259)
T ss_pred EE
Confidence 64
No 80
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.51 E-value=5.2e-13 Score=104.66 Aligned_cols=120 Identities=15% Similarity=0.204 Sum_probs=85.8
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+++++++||||+|+||.++++.|++.| ++|++++|+.+. . +.+.+... ....++.++.+|+
T Consensus 37 ~~~~k~vlItGasggIG~~la~~La~~G---~~Vi~~~R~~~~--l-~~~~~~l~------------~~~~~~~~~~~Dl 98 (293)
T PRK05866 37 DLTGKRILLTGASSGIGEAAAEQFARRG---ATVVAVARREDL--L-DAVADRIT------------RAGGDAMAVPCDL 98 (293)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHH--H-HHHHHHHH------------hcCCcEEEEEccC
Confidence 3567999999999999999999999998 589999987421 1 11111111 0124577899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc---------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCC
Q psy17489 113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF---------DEALQKAIRANLYATKQMLNLAK----ECVNLK 172 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~---------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~ 172 (177)
.+. +++..+++ ++|++|||||.... .+.++..+++|+.++.++++.+. +. +..
T Consensus 99 ~d~------~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g 171 (293)
T PRK05866 99 SDL------DAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLER-GDG 171 (293)
T ss_pred CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCc
Confidence 998 56655554 78999999997531 23456678999999988887654 44 456
Q ss_pred CceeC
Q psy17489 173 RFCEL 177 (177)
Q Consensus 173 ~~v~v 177 (177)
++|++
T Consensus 172 ~iv~i 176 (293)
T PRK05866 172 HIINV 176 (293)
T ss_pred EEEEE
Confidence 77764
No 81
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.50 E-value=2.9e-13 Score=103.30 Aligned_cols=117 Identities=15% Similarity=0.166 Sum_probs=84.6
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+++++||||+|+||+++++.|++.| .+|++++|+.... +.+...... ...++.++.+|+.+.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g---~~v~~~~r~~~~~---~~~~~~~~~------------~~~~~~~~~~D~~~~ 62 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAG---ANVVVNDLGEAGA---EAAAKVATD------------AGGSVIYLVADVTKE 62 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHHHh------------cCCceEEEECCCCCH
Confidence 4789999999999999999999999 5899999874211 122221110 124688899999997
Q ss_pred CCCCCHHHHHHH-------hcCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCceeC
Q psy17489 116 HLGLSEDSEQLI-------KSKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLA----KECVNLKRFCEL 177 (177)
Q Consensus 116 ~~~~~~~~~~~~-------~~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~v 177 (177)
+++..+ +.++|+|||+|+.... .++++..++.|+.++..+++.+ ++. +.++|||+
T Consensus 63 ------~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~~v~~ 135 (255)
T TIGR01963 63 ------DEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQ-GWGRIINI 135 (255)
T ss_pred ------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEE
Confidence 544333 3468999999987432 3456678899999988888876 445 66788874
No 82
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.50 E-value=5e-13 Score=101.85 Aligned_cols=118 Identities=10% Similarity=0.099 Sum_probs=85.8
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+|+||+++++.|++.| ++|++++|+.. ........ + . ...++.++++|++
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G---~~v~~~~r~~~------~~~~~~~~-----~----~-~~~~~~~~~~D~~ 63 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREG---ARVVVADRDAE------AAERVAAA-----I----A-AGGRAFARQGDVG 63 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCC---CeEEEecCCHH------HHHHHHHH-----H----h-cCCeEEEEEcCCC
Confidence 468999999999999999999999998 58999888742 11111110 0 0 1245788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCce
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRFC 175 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v 175 (177)
|+ +++.++++ ++|+|||+++... ..+.++..+++|+.++.++.+.+. +. +.++||
T Consensus 64 ~~------~~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii 136 (252)
T PRK06138 64 SA------EAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ-GGGSIV 136 (252)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-CCeEEE
Confidence 98 56665543 6899999999743 235567789999999988777653 44 556777
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
++
T Consensus 137 ~~ 138 (252)
T PRK06138 137 NT 138 (252)
T ss_pred EE
Confidence 64
No 83
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.50 E-value=4.2e-13 Score=105.29 Aligned_cols=117 Identities=20% Similarity=0.367 Sum_probs=84.7
Q ss_pred eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCC
Q psy17489 38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHL 117 (177)
Q Consensus 38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 117 (177)
+|+||||+|+||.+++++|++.|.+ .+|++++|...... .+.+.... ...++.++.+|+.++
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~-~~v~~~~~~~~~~~-~~~~~~~~--------------~~~~~~~~~~Dl~~~-- 62 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPD-AEVIVLDKLTYAGN-LENLADLE--------------DNPRYRFVKGDIGDR-- 62 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCC-CEEEEecCCCcchh-hhhhhhhc--------------cCCCcEEEEcCCcCH--
Confidence 5899999999999999999998632 37888776421111 11111110 113678899999998
Q ss_pred CCCHHHHHHHhcC--CcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCC-CceeC
Q psy17489 118 GLSEDSEQLIKSK--VNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLK-RFCEL 177 (177)
Q Consensus 118 ~~~~~~~~~~~~~--~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~-~~v~v 177 (177)
+.+..+++. +|+|||+|+..... +.+..++++|+.++.+++++|.+. ..+ ++||+
T Consensus 63 ----~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~i~~ 123 (317)
T TIGR01181 63 ----ELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKY-WHEFRFHHI 123 (317)
T ss_pred ----HHHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEe
Confidence 788888876 89999999975432 345567899999999999999886 333 67763
No 84
>PRK06196 oxidoreductase; Provisional
Probab=99.50 E-value=4.8e-13 Score=105.75 Aligned_cols=116 Identities=16% Similarity=0.191 Sum_probs=84.4
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+++|+++||||+|+||.++++.|++.| .+|++++|+.. ...+.... ..++.++.+|+
T Consensus 23 ~l~~k~vlITGasggIG~~~a~~L~~~G---~~Vv~~~R~~~------~~~~~~~~-------------l~~v~~~~~Dl 80 (315)
T PRK06196 23 DLSGKTAIVTGGYSGLGLETTRALAQAG---AHVIVPARRPD------VAREALAG-------------IDGVEVVMLDL 80 (315)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH-------------hhhCeEEEccC
Confidence 3578999999999999999999999999 58999888642 22221110 12377899999
Q ss_pred CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-----hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCcee
Q psy17489 113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-----DEALQKAIRANLYATKQMLNLAK----ECVNLKRFCE 176 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-----~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~ 176 (177)
++. ++++.++ .++|++|||||.... .+.++..+++|+.++..+++.+. +. +..++|+
T Consensus 81 ~d~------~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~ 153 (315)
T PRK06196 81 ADL------ESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-AGARVVA 153 (315)
T ss_pred CCH------HHHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCeEEE
Confidence 998 5665544 368999999997431 24567789999999877777543 33 4457776
Q ss_pred C
Q psy17489 177 L 177 (177)
Q Consensus 177 v 177 (177)
+
T Consensus 154 v 154 (315)
T PRK06196 154 L 154 (315)
T ss_pred E
Confidence 4
No 85
>PRK05865 hypothetical protein; Provisional
Probab=99.50 E-value=2.2e-13 Score=119.00 Aligned_cols=101 Identities=21% Similarity=0.278 Sum_probs=84.6
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+++||||+||||+++++.|++.| ++|++++|+.... ...++.++.+|+.+.
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G---~~Vv~l~R~~~~~------------------------~~~~v~~v~gDL~D~- 52 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQG---HEVVGIARHRPDS------------------------WPSSADFIAADIRDA- 52 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCc---CEEEEEECCchhh------------------------cccCceEEEeeCCCH-
Confidence 579999999999999999999999 5888888864210 013577899999998
Q ss_pred CCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 117 LGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+.+..+++++|+|||+|+.... .+++|+.++.+++++|++. ++++|||+
T Consensus 53 -----~~l~~al~~vD~VVHlAa~~~~------~~~vNv~GT~nLLeAa~~~-gvkr~V~i 101 (854)
T PRK05865 53 -----TAVESAMTGADVVAHCAWVRGR------NDHINIDGTANVLKAMAET-GTGRIVFT 101 (854)
T ss_pred -----HHHHHHHhCCCEEEECCCcccc------hHHHHHHHHHHHHHHHHHc-CCCeEEEE
Confidence 7888888999999999986432 4689999999999999998 88999985
No 86
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.50 E-value=8.9e-13 Score=100.85 Aligned_cols=119 Identities=11% Similarity=0.105 Sum_probs=84.7
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+|+||.++++.|.+.| ++|++++|++.. . +.+.+.+. ....++.++.+|++
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~G---~~v~~~~r~~~~--~-~~~~~~~~------------~~~~~~~~~~~D~~ 65 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFAREG---AKVVVGARRQAE--L-DQLVAEIR------------AEGGEAVALAGDVR 65 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHH------------hcCCcEEEEEcCCC
Confidence 467899999999999999999999999 589999887521 1 11111111 01246788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc--------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCc
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF--------DEALQKAIRANLYATKQMLNLAK----ECVNLKRF 174 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~--------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~ 174 (177)
+. +++..+++ ++|++||+||.... .++++..+++|+.++..+.+.+. +. +..++
T Consensus 66 ~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~~~i 138 (254)
T PRK07478 66 DE------AYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-GGGSL 138 (254)
T ss_pred CH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceE
Confidence 98 55555443 68999999997421 25677889999999888866543 33 44567
Q ss_pred eeC
Q psy17489 175 CEL 177 (177)
Q Consensus 175 v~v 177 (177)
|++
T Consensus 139 v~~ 141 (254)
T PRK07478 139 IFT 141 (254)
T ss_pred EEE
Confidence 653
No 87
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.49 E-value=8.4e-13 Score=100.87 Aligned_cols=120 Identities=18% Similarity=0.222 Sum_probs=83.0
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEE-EeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-VRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
+++++++||||+|+||+++++.|+++| ..|++. .|+.. ...+....... ...++.++.+|+
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G---~~v~i~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~ 65 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDG---ALVAIHYGRNKQ--AADETIREIES-------------NGGKAFLIEADL 65 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHH--HHHHHHHHHHh-------------cCCcEEEEEcCc
Confidence 467899999999999999999999998 466654 45431 11111111100 124678899999
Q ss_pred CCCCCCCCHHHHHHHhc-------------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc-CCC
Q psy17489 113 ESEHLGLSEDSEQLIKS-------------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC-VNL 171 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-------------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~-~~~ 171 (177)
++. +++..+++ ++|++||+||.... ...++..+++|+.++.++++.+.+. .+.
T Consensus 66 ~d~------~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 139 (254)
T PRK12746 66 NSI------DGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE 139 (254)
T ss_pred CCH------HHHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC
Confidence 998 56655444 58999999997432 2345677899999999999988763 133
Q ss_pred CCceeC
Q psy17489 172 KRFCEL 177 (177)
Q Consensus 172 ~~~v~v 177 (177)
.+||++
T Consensus 140 ~~~v~~ 145 (254)
T PRK12746 140 GRVINI 145 (254)
T ss_pred CEEEEE
Confidence 466653
No 88
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.49 E-value=3.9e-13 Score=102.77 Aligned_cols=117 Identities=15% Similarity=0.212 Sum_probs=86.2
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+|+||.++++.|++.| .+|+.++|+... .+...+. ...++.++.+|++
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G---~~Vi~~~r~~~~---~~~~~~~---------------~~~~~~~~~~Dl~ 71 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKG---ARVALLDRSEDV---AEVAAQL---------------LGGNAKGLVCDVS 71 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHh---------------hCCceEEEEecCC
Confidence 678999999999999999999999999 588988886531 1111111 1135678899999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE 176 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~ 176 (177)
+. +++..+++ ++|++||+||.... .+.++..+++|+.++.++++.+... .+..+||+
T Consensus 72 ~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 145 (255)
T PRK06841 72 DS------QSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVN 145 (255)
T ss_pred CH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEE
Confidence 87 55555443 68999999997532 3566778999999999999987642 14567876
Q ss_pred C
Q psy17489 177 L 177 (177)
Q Consensus 177 v 177 (177)
+
T Consensus 146 ~ 146 (255)
T PRK06841 146 L 146 (255)
T ss_pred E
Confidence 4
No 89
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.49 E-value=7.3e-13 Score=101.48 Aligned_cols=120 Identities=14% Similarity=0.160 Sum_probs=87.0
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+++++++||||+|+||.++++.|++.| .+|++++|++... +...+... ...++.++.+|+
T Consensus 4 ~l~~~~ilItGasggiG~~la~~l~~~G---~~v~~~~r~~~~~---~~~~~~~~-------------~~~~~~~~~~D~ 64 (258)
T PRK08628 4 NLKDKVVIVTGGASGIGAAISLRLAEEG---AIPVIFGRSAPDD---EFAEELRA-------------LQPRAEFVQVDL 64 (258)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHcC---CcEEEEcCChhhH---HHHHHHHh-------------cCCceEEEEccC
Confidence 3678999999999999999999999999 5788888875322 11111111 124688899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC------chHHHHHHHHHhHHHHHHHHHHHHhc--CCCCCceeC
Q psy17489 113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR------FDEALQKAIRANLYATKQMLNLAKEC--VNLKRFCEL 177 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~------~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~v 177 (177)
++. +++..+++ ++|++||+||... ..++++..+++|+.++.++.+.+.+. .+..+||++
T Consensus 65 ~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ 138 (258)
T PRK08628 65 TDD------AQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNI 138 (258)
T ss_pred CCH------HHHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEE
Confidence 998 55555543 6899999999532 12567788999999999998887542 133567764
No 90
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.49 E-value=1.8e-12 Score=101.49 Aligned_cols=123 Identities=19% Similarity=0.194 Sum_probs=87.7
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN 111 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D 111 (177)
..+++|+++||||+|+||.++++.|++.| .+|++++|+... ..+.+.+.... ...++.++.+|
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G---~~V~l~~r~~~~--~~~~~~~~~~~------------~~~~~~~~~~D 104 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEG---ADIAIVYLDEHE--DANETKQRVEK------------EGVKCLLIPGD 104 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCcch--HHHHHHHHHHh------------cCCeEEEEEcc
Confidence 45678999999999999999999999999 588888886522 11222221110 12467889999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc--------hHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCce
Q psy17489 112 LESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF--------DEALQKAIRANLYATKQMLNLAKEC-VNLKRFC 175 (177)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~--------~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v 175 (177)
+++. +.+..+++ ++|++||+|+.... .+.+...+++|+.++.++++.+.+. ....+||
T Consensus 105 l~~~------~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV 178 (290)
T PRK06701 105 VSDE------AFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAII 178 (290)
T ss_pred CCCH------HHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEE
Confidence 9997 55555443 68999999996421 3566778999999999999998753 1224666
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
++
T Consensus 179 ~i 180 (290)
T PRK06701 179 NT 180 (290)
T ss_pred EE
Confidence 53
No 91
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.49 E-value=8.5e-13 Score=102.50 Aligned_cols=120 Identities=13% Similarity=0.134 Sum_probs=85.8
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+.+|+++||||+|+||+++++.|++.| .+|++.+|+... . +.+.+.+. ....++.++.+|++
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G---~~Vv~~~r~~~~--l-~~~~~~l~------------~~~~~~~~~~~Dv~ 65 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRG---ARVVLGDVDKPG--L-RQAVNHLR------------AEGFDVHGVMCDVR 65 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHH------------hcCCeEEEEeCCCC
Confidence 568999999999999999999999999 578888876421 1 11111111 01245788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh----cCCCCCce
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE----CVNLKRFC 175 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v 175 (177)
+. +++..+++ ++|++|||||... ..+.++..+++|+.++.++++.+.. .+...++|
T Consensus 66 d~------~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv 139 (275)
T PRK05876 66 HR------EEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVV 139 (275)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 98 56655543 5899999999742 1356778899999999999988753 31235676
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
++
T Consensus 140 ~i 141 (275)
T PRK05876 140 FT 141 (275)
T ss_pred Ee
Confidence 54
No 92
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.49 E-value=7.2e-13 Score=100.28 Aligned_cols=119 Identities=18% Similarity=0.245 Sum_probs=86.1
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+.+++++||||+|++|.++++.|.++| .+|+.++|++... +.+.+... ....++.++.+|+.
T Consensus 3 ~~~~~ilItGasg~iG~~l~~~l~~~g---~~v~~~~r~~~~~---~~~~~~~~------------~~~~~~~~~~~D~~ 64 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLAADG---AKVVIYDSNEEAA---EALAAELR------------AAGGEARVLVFDVS 64 (246)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCChhHH---HHHHHHHH------------hcCCceEEEEccCC
Confidence 346899999999999999999999999 4788888875321 11111111 12346888999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCce
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAK----ECVNLKRFC 175 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v 175 (177)
++ +++..+++ .+|+|||++|.... .+.+...+++|+.+..++++.+. +. +.++||
T Consensus 65 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii 137 (246)
T PRK05653 65 DE------AAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKA-RYGRIV 137 (246)
T ss_pred CH------HHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEE
Confidence 98 55555443 57999999987432 34566789999999999988874 44 567887
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
++
T Consensus 138 ~~ 139 (246)
T PRK05653 138 NI 139 (246)
T ss_pred EE
Confidence 64
No 93
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.49 E-value=4.2e-13 Score=103.03 Aligned_cols=116 Identities=12% Similarity=0.039 Sum_probs=84.2
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+|+++||||+|+||.++++.|++.| .+|++++|+.. .+.+.... . ...++.++.+|+.+.
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G---~~V~~~~r~~~------~~~~~~~~---------~--~~~~~~~~~~D~~~~ 60 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEG---WRVGAYDINEA------GLAALAAE---------L--GAGNAWTGALDVTDR 60 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeCCHH------HHHHHHHH---------h--cCCceEEEEecCCCH
Confidence 3689999999999999999999999 58999888652 22222110 0 024688999999997
Q ss_pred CCCCCHHHHHHHhc--------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489 116 HLGLSEDSEQLIKS--------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL 177 (177)
Q Consensus 116 ~~~~~~~~~~~~~~--------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v 177 (177)
+++.++++ ++|+||||||.... .++++..+++|+.++.++++.+... .+..+||++
T Consensus 61 ------~~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~i 134 (260)
T PRK08267 61 ------AAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINT 134 (260)
T ss_pred ------HHHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEe
Confidence 55555433 57999999997531 3567788999999999998887431 144567764
No 94
>PLN02778 3,5-epimerase/4-reductase
Probab=99.49 E-value=2.7e-13 Score=106.51 Aligned_cols=92 Identities=22% Similarity=0.167 Sum_probs=67.3
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
.|+++||||+||||+++++.|+++|+ +|+...+ |+.+.
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~---~V~~~~~---------------------------------------~~~~~ 46 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGI---DFHYGSG---------------------------------------RLENR 46 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCC---EEEEecC---------------------------------------ccCCH
Confidence 47899999999999999999999984 5543211 11121
Q ss_pred CCCCCHHHHHHHhc--CCcEEEEcCcccCc------hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489 116 HLGLSEDSEQLIKS--KVNIIFHCAASLRF------DEALQKAIRANLYATKQMLNLAKECVNLKRFCE 176 (177)
Q Consensus 116 ~~~~~~~~~~~~~~--~~d~vi~~aa~~~~------~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~ 176 (177)
+.+...+. ++|+|||+||..+. ..+...++++|+.++.+++++|++. +++++++
T Consensus 47 ------~~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-gv~~v~~ 108 (298)
T PLN02778 47 ------ASLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER-GLVLTNY 108 (298)
T ss_pred ------HHHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEE
Confidence 22333333 68999999998642 1345678899999999999999998 7866554
No 95
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.49 E-value=6.1e-13 Score=101.23 Aligned_cols=118 Identities=12% Similarity=0.159 Sum_probs=86.4
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+|+||.++++.|++.| ++|++++|+... . +.+..... ...++.++.+|+.
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~-------------~~~~~~~~~~D~~ 63 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEG---ARVVVTDRNEEA--A-ERVAAEIL-------------AGGRAIAVAADVS 63 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHh-------------cCCeEEEEECCCC
Confidence 467899999999999999999999999 579999997622 1 11111111 0245788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHh----cCCCCCc
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKE----CVNLKRF 174 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~ 174 (177)
+. +++..+++ ++|+|||+|+... ..+.++..+++|+.++..+++.+.. . +.++|
T Consensus 64 ~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~i 136 (251)
T PRK07231 64 DE------ADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGE-GGGAI 136 (251)
T ss_pred CH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEE
Confidence 98 56665543 6799999999742 1355677899999998888877654 3 55677
Q ss_pred eeC
Q psy17489 175 CEL 177 (177)
Q Consensus 175 v~v 177 (177)
|++
T Consensus 137 v~~ 139 (251)
T PRK07231 137 VNV 139 (251)
T ss_pred EEE
Confidence 764
No 96
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.49 E-value=8.1e-13 Score=100.51 Aligned_cols=120 Identities=16% Similarity=0.123 Sum_probs=86.1
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+|+||.++++.|++.| ++|++++|++.. . ..+.+... ....++.++.+|+.
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G---~~v~~~~r~~~~--~-~~~~~~~~------------~~~~~~~~~~~Dl~ 66 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAG---ATVAFNDGLAAE--A-RELAAALE------------AAGGRAHAIAADLA 66 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcC---CEEEEEeCCHHH--H-HHHHHHHH------------hcCCcEEEEEccCC
Confidence 568999999999999999999999999 578888776421 1 11111111 01246888999999
Q ss_pred CCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489 114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE 176 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~ 176 (177)
+. +++..++ .++|++||++|.... .+.++..+++|+.++.++++.+.+. .+..+||+
T Consensus 67 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~ 140 (250)
T PRK12939 67 DP------ASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVN 140 (250)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 97 5665554 368999999997431 3566778899999999999887542 12347776
Q ss_pred C
Q psy17489 177 L 177 (177)
Q Consensus 177 v 177 (177)
+
T Consensus 141 i 141 (250)
T PRK12939 141 L 141 (250)
T ss_pred E
Confidence 4
No 97
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.49 E-value=6.4e-13 Score=102.10 Aligned_cols=119 Identities=13% Similarity=0.125 Sum_probs=85.6
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+.+++++||||+|+||.++++.|++.| ++|++++|+.. ..+....... ...++.++.+|+.
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G---~~Vv~~~r~~~---~~~~~~~~~~-------------~~~~~~~~~~Dl~ 64 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHG---ANLILLDISPE---IEKLADELCG-------------RGHRCTAVVADVR 64 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEecCCHH---HHHHHHHHHH-------------hCCceEEEECCCC
Confidence 467999999999999999999999999 58888888642 1111111111 1246788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE 176 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~ 176 (177)
++ +++..+++ ++|++||+||.... .+.+++.+++|+.++.++++.+.+. .+..+||+
T Consensus 65 ~~------~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~ 138 (263)
T PRK08226 65 DP------ASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVM 138 (263)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 98 55555443 68999999997432 3556778999999999999886542 13456765
Q ss_pred C
Q psy17489 177 L 177 (177)
Q Consensus 177 v 177 (177)
+
T Consensus 139 i 139 (263)
T PRK08226 139 M 139 (263)
T ss_pred E
Confidence 3
No 98
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.48 E-value=1.3e-12 Score=101.19 Aligned_cols=121 Identities=12% Similarity=0.121 Sum_probs=85.6
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+.+|+++||||+|+||.++++.|+++| .+|++.+|+... . ..+..... ....++.++.+|+
T Consensus 7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G---~~V~~~~r~~~~--~-~~~~~~~~------------~~~~~~~~~~~Dl 68 (274)
T PRK07775 7 HPDRRPALVAGASSGIGAATAIELAAAG---FPVALGARRVEK--C-EELVDKIR------------ADGGEAVAFPLDV 68 (274)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHH------------hcCCeEEEEECCC
Confidence 4567899999999999999999999999 578888876421 1 11111111 0124678889999
Q ss_pred CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489 113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFC 175 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v 175 (177)
++. +++..+++ ++|++||+||.... .+.++..+++|+.++.++++.+... .+..+||
T Consensus 69 ~~~------~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv 142 (274)
T PRK07775 69 TDP------DSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLI 142 (274)
T ss_pred CCH------HHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEE
Confidence 998 56655543 67999999997532 2456677899999999998886531 1445677
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
++
T Consensus 143 ~i 144 (274)
T PRK07775 143 FV 144 (274)
T ss_pred EE
Confidence 64
No 99
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.48 E-value=9.6e-13 Score=100.94 Aligned_cols=112 Identities=18% Similarity=0.234 Sum_probs=83.9
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN 111 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D 111 (177)
..+++|+++||||+|+||.++++.|.+.| .+|++++|+.... ...++.++.+|
T Consensus 5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G---~~v~~~~r~~~~~------------------------~~~~~~~~~~D 57 (260)
T PRK06523 5 LELAGKRALVTGGTKGIGAATVARLLEAG---ARVVTTARSRPDD------------------------LPEGVEFVAAD 57 (260)
T ss_pred cCCCCCEEEEECCCCchhHHHHHHHHHCC---CEEEEEeCChhhh------------------------cCCceeEEecC
Confidence 34678999999999999999999999999 5899998865211 11357889999
Q ss_pred CCCCCCCCCHHHHHHH-------hcCCcEEEEcCcccC---------chHHHHHHHHHhHHHHHHHHHHHH----hcCCC
Q psy17489 112 LESEHLGLSEDSEQLI-------KSKVNIIFHCAASLR---------FDEALQKAIRANLYATKQMLNLAK----ECVNL 171 (177)
Q Consensus 112 ~~~~~~~~~~~~~~~~-------~~~~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~ 171 (177)
+.+. +.+..+ +.++|++||+||... ..+.++..+++|+.++.++.+.+. +. +.
T Consensus 58 ~~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~ 130 (260)
T PRK06523 58 LTTA------EGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIAR-GS 130 (260)
T ss_pred CCCH------HHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CC
Confidence 9997 444433 346899999999531 235677889999999988877654 33 44
Q ss_pred CCceeC
Q psy17489 172 KRFCEL 177 (177)
Q Consensus 172 ~~~v~v 177 (177)
.++|++
T Consensus 131 g~ii~i 136 (260)
T PRK06523 131 GVIIHV 136 (260)
T ss_pred cEEEEE
Confidence 567653
No 100
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.48 E-value=8e-13 Score=101.29 Aligned_cols=107 Identities=14% Similarity=0.204 Sum_probs=81.7
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+.+++++||||+|+||.++++.|++.| ++|++++|+.. ...+.... ...++.++.+|++
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G---~~v~~~~r~~~------~~~~~~~~------------~~~~~~~~~~D~~ 62 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEG---ARVVIADIKPA------RARLAALE------------IGPAAIAVSLDVT 62 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcC---CEEEEEcCCHH------HHHHHHHH------------hCCceEEEEccCC
Confidence 567899999999999999999999999 58998888642 22221110 1135788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+. +++..+++ ++|++||+||.... .++++..+++|+.++.++++++..
T Consensus 63 ~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 124 (257)
T PRK07067 63 RQ------DSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVAR 124 (257)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHH
Confidence 98 55555543 68999999996431 356778899999999999999864
No 101
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.48 E-value=1.3e-12 Score=99.82 Aligned_cols=113 Identities=13% Similarity=0.182 Sum_probs=82.7
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+++||||+|+||.++++.|++.| ++|++++|++. .+...... ...++.++.+|+.+.
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G---~~V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~Dl~~~- 58 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQG---HKVIATGRRQE------RLQELKDE------------LGDNLYIAQLDVRNR- 58 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC---CEEEEEECCHH------HHHHHHHH------------hccceEEEEecCCCH-
Confidence 579999999999999999999999 58999988652 22222110 124678899999998
Q ss_pred CCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCceeC
Q psy17489 117 LGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRFCEL 177 (177)
Q Consensus 117 ~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~v 177 (177)
+++..+++ ++|++||+||... ..+++++.+++|+.++..+++.+. +. +.++||++
T Consensus 59 -----~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~i 132 (248)
T PRK10538 59 -----AAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-NHGHIINI 132 (248)
T ss_pred -----HHHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEE
Confidence 55555443 6899999998642 235677889999999887777654 33 55677764
No 102
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.48 E-value=5.9e-13 Score=101.89 Aligned_cols=120 Identities=13% Similarity=0.187 Sum_probs=86.4
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+.+|+++||||+|+||.++++.|++.| ++|++++|++.. . +.+..... ....++.++.+|++
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~------------~~~~~~~~~~~D~~ 64 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAG---ADVVLAARTAER--L-DEVAAEID------------DLGRRALAVPTDIT 64 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcC---CEEEEEeCCHHH--H-HHHHHHHH------------HhCCceEEEecCCC
Confidence 467999999999999999999999999 589999886521 1 11211111 01246788999999
Q ss_pred CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc--CCCCCcee
Q psy17489 114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC--VNLKRFCE 176 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~ 176 (177)
+. +++..++ .++|++||+||... ..+.++..+++|+.++..+++++... ...++||+
T Consensus 65 ~~------~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~ 138 (258)
T PRK07890 65 DE------DQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVM 138 (258)
T ss_pred CH------HHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEE
Confidence 87 5555443 46899999998642 13567788999999999999998652 12246765
Q ss_pred C
Q psy17489 177 L 177 (177)
Q Consensus 177 v 177 (177)
+
T Consensus 139 ~ 139 (258)
T PRK07890 139 I 139 (258)
T ss_pred E
Confidence 3
No 103
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.48 E-value=1.3e-12 Score=98.97 Aligned_cols=120 Identities=15% Similarity=0.247 Sum_probs=85.6
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+.+|+++||||+|+||+++++.|++.| ++|+++.|+... ..+.+.+... ....++.++.+|+.
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g---~~v~~~~~~~~~--~~~~~~~~~~------------~~~~~~~~~~~D~~ 66 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAG---ADVVVHYRSDEE--AAEELVEAVE------------ALGRRAQAVQADVT 66 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeCCCHH--HHHHHHHHHH------------hcCCceEEEECCcC
Confidence 346899999999999999999999999 467666665421 1111221111 01246889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCce
Q psy17489 114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRFC 175 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v 175 (177)
+. +.+..++ .++|++||+||... ..+.++..+++|+.++.++++.+. +. +.++||
T Consensus 67 ~~------~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~i 139 (249)
T PRK12825 67 DK------AALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ-RGGRIV 139 (249)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEE
Confidence 98 5665554 36799999999642 234567789999999999998873 44 567888
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
++
T Consensus 140 ~~ 141 (249)
T PRK12825 140 NI 141 (249)
T ss_pred EE
Confidence 74
No 104
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.48 E-value=5.3e-13 Score=103.48 Aligned_cols=120 Identities=13% Similarity=0.194 Sum_probs=85.0
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
++++++||||+|++|.++++.|+++| ++|++++|+.... +.+.+.... .....++.++.+|+++
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~~~~----------~~~~~~~~~~~~D~~d 65 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKG---YLVIATMRNPEKQ---ENLLSQATQ----------LNLQQNIKVQQLDVTD 65 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCC---CEEEEEeCCHHHH---HHHHHHHHh----------cCCCCceeEEecCCCC
Confidence 46889999999999999999999999 5899988875221 112111110 0012468889999999
Q ss_pred CCCCCCHHHHHH---H---hcCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCceeC
Q psy17489 115 EHLGLSEDSEQL---I---KSKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLA----KECVNLKRFCEL 177 (177)
Q Consensus 115 ~~~~~~~~~~~~---~---~~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~v 177 (177)
+ +++.. + +.++|++||+||.... .+.+++.+++|+.++.++++.+ ++. +.++||++
T Consensus 66 ~------~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~v 138 (280)
T PRK06914 66 Q------NSIHNFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQ-KSGKIINI 138 (280)
T ss_pred H------HHHHHHHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEE
Confidence 8 44433 2 2468999999997432 2566778899999999998885 444 56778764
No 105
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.48 E-value=1.7e-12 Score=99.91 Aligned_cols=116 Identities=15% Similarity=0.195 Sum_probs=85.2
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+|+||.++++.|++.| .+|++++|+.. ...+.... ...++.++++|++
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~Dl~ 62 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAG---ARVAIVDIDAD------NGAAVAAS------------LGERARFIATDIT 62 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH------------hCCeeEEEEecCC
Confidence 568999999999999999999999999 58999988652 11111110 1246788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC------chHHHHHHHHHhHHHHHHHHHHHHhc--CCCCCcee
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR------FDEALQKAIRANLYATKQMLNLAKEC--VNLKRFCE 176 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~------~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~ 176 (177)
+. +++..+++ ++|++|||||... ..+.++..+++|+.++..+++.+... .+-.++|+
T Consensus 63 ~~------~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~ 134 (261)
T PRK08265 63 DD------AAIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVN 134 (261)
T ss_pred CH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEE
Confidence 98 55555443 6899999999642 24677788999999999999877542 12345665
No 106
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.47 E-value=1.2e-12 Score=99.55 Aligned_cols=121 Identities=17% Similarity=0.217 Sum_probs=84.9
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+|+||.++++.|++.| .+|++..++.. ...++..... . ....++.++.+|++
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g---~~v~~~~~~~~-~~~~~~~~~l-~------------~~~~~~~~~~~D~~ 66 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEG---AKVVINYNSSK-EAAENLVNEL-G------------KEGHDVYAVQADVS 66 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEcCCcH-HHHHHHHHHH-H------------hcCCeEEEEECCCC
Confidence 467999999999999999999999998 46766554321 1111111111 1 11246888999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE 176 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~ 176 (177)
+. +.+..+++ ++|+|||+||.... .+.+++.+++|+.++.++++.+... .+..+||+
T Consensus 67 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 140 (247)
T PRK12935 67 KV------EDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIIS 140 (247)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 98 55655544 48999999997432 2567788999999999999988642 13457776
Q ss_pred C
Q psy17489 177 L 177 (177)
Q Consensus 177 v 177 (177)
+
T Consensus 141 ~ 141 (247)
T PRK12935 141 I 141 (247)
T ss_pred E
Confidence 4
No 107
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.47 E-value=1.5e-12 Score=99.69 Aligned_cols=121 Identities=10% Similarity=0.077 Sum_probs=85.9
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+|+||.++++.|++.| ++|++++|+... .. +.+.+.+.. ...++.++.+|+.
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G---~~v~~~~r~~~~-~~-~~~~~~l~~------------~~~~~~~~~~D~~ 68 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAG---ADVALFDLRTDD-GL-AETAEHIEA------------AGRRAIQIAADVT 68 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCcch-HH-HHHHHHHHh------------cCCceEEEEcCCC
Confidence 578999999999999999999999999 588888886521 11 111111110 1246778899999
Q ss_pred CCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489 114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE 176 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~ 176 (177)
++ +++..++ .++|++|||||.... .+++++.+++|+.++..+++.+... .+..+||+
T Consensus 69 ~~------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 142 (254)
T PRK06114 69 SK------ADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVN 142 (254)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEE
Confidence 98 5555544 357999999997532 4567888999999999888876431 13456665
Q ss_pred C
Q psy17489 177 L 177 (177)
Q Consensus 177 v 177 (177)
+
T Consensus 143 i 143 (254)
T PRK06114 143 I 143 (254)
T ss_pred E
Confidence 3
No 108
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.47 E-value=9.6e-13 Score=100.65 Aligned_cols=117 Identities=12% Similarity=0.072 Sum_probs=85.3
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+++++||||+|+||.++++.|++.| ++|++++|+... .+.+.+.... ...++.++.+|+.+.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G---~~v~~~~r~~~~---~~~~~~~~~~------------~~~~~~~~~~D~~~~ 63 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKG---HNVIAGVQIAPQ---VTALRAEAAR------------RGLALRVEKLDLTDA 63 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHHHh------------cCCcceEEEeeCCCH
Confidence 5789999999999999999999999 688988886421 1222221110 124578899999998
Q ss_pred CCCCCHHHHHHHhc-CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCceeC
Q psy17489 116 HLGLSEDSEQLIKS-KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLA----KECVNLKRFCEL 177 (177)
Q Consensus 116 ~~~~~~~~~~~~~~-~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~v 177 (177)
+.+..++. ++|+||||||.... .+.++..+++|+.++..+.+.+ .+. +.++||++
T Consensus 64 ------~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~ 130 (257)
T PRK09291 64 ------IDRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR-GKGKVVFT 130 (257)
T ss_pred ------HHHHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEE
Confidence 67777776 89999999997531 3456678899999988776654 344 45778764
No 109
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.47 E-value=1.6e-12 Score=99.04 Aligned_cols=118 Identities=13% Similarity=0.170 Sum_probs=86.0
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+|+||.+++++|++.| .+|+.++|+.. +.+.+.... ...++.++.+|++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G---~~vi~~~r~~~-----~~~~~~~~~------------~~~~~~~~~~D~~ 62 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAG---ADIVGAGRSEP-----SETQQQVEA------------LGRRFLSLTADLS 62 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCchH-----HHHHHHHHh------------cCCceEEEECCCC
Confidence 578999999999999999999999999 58888887541 122221110 1246889999999
Q ss_pred CCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CC-CCCce
Q psy17489 114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VN-LKRFC 175 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~-~~~~v 175 (177)
+. +++..++ .++|++||+||.... .+.++..+++|+.++.++++.+.+. .+ ..++|
T Consensus 63 ~~------~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv 136 (248)
T TIGR01832 63 DI------EAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKII 136 (248)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 98 5555443 368999999997531 3567788999999999999987542 12 35676
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
++
T Consensus 137 ~~ 138 (248)
T TIGR01832 137 NI 138 (248)
T ss_pred EE
Confidence 63
No 110
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.47 E-value=8.6e-13 Score=104.32 Aligned_cols=122 Identities=15% Similarity=0.156 Sum_probs=85.9
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+++||.++++.|++.| .+|++.+|+... .++.+.++.. +. ...++.++.+|+.
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~G---~~Vil~~R~~~~--~~~~~~~l~~---------~~--~~~~v~~~~~Dl~ 75 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAAG---AEVILPVRNRAK--GEAAVAAIRT---------AV--PDAKLSLRALDLS 75 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHH--HHHHHHHHHH---------hC--CCCceEEEEecCC
Confidence 578999999999999999999999999 689999887521 1121221111 00 1236888999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc------hHHHHHHHHHhHHHHHHHHHHHHhc--CCCCCceeC
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF------DEALQKAIRANLYATKQMLNLAKEC--VNLKRFCEL 177 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~------~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~v 177 (177)
+. ++++.+++ ++|++|||||.... .+.++..+.+|+.+...+.+.+... .+..|+|++
T Consensus 76 d~------~sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~v 148 (313)
T PRK05854 76 SL------ASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQ 148 (313)
T ss_pred CH------HHHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 98 55655443 58999999997532 2456778999999999888876531 123466653
No 111
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.47 E-value=1.6e-12 Score=98.12 Aligned_cols=117 Identities=11% Similarity=0.137 Sum_probs=85.2
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+|+||.++++.|++.| ++|++++|+... ..+.+.+.. ...+.++.+|+.
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~G---~~v~~~~r~~~~--~~~~~~~~~---------------~~~~~~~~~D~~ 64 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAARG---ARVALIGRGAAP--LSQTLPGVP---------------ADALRIGGIDLV 64 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHCC---CeEEEEeCChHh--HHHHHHHHh---------------hcCceEEEeecC
Confidence 568999999999999999999999999 589999986521 112222111 134667889999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCce
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRFC 175 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v 175 (177)
+. +++..+++ ++|+|||+++... ..+.+.+.+++|+.++.++++.+. +. +.++||
T Consensus 65 ~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv 137 (239)
T PRK12828 65 DP------QAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTAS-GGGRIV 137 (239)
T ss_pred CH------HHHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhc-CCCEEE
Confidence 87 55555443 6899999998642 134566778999999999988874 33 567887
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
++
T Consensus 138 ~~ 139 (239)
T PRK12828 138 NI 139 (239)
T ss_pred EE
Confidence 64
No 112
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.47 E-value=8.7e-13 Score=100.85 Aligned_cols=112 Identities=14% Similarity=0.162 Sum_probs=85.1
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+|+||.++++.|++.| ++|++++|+... .. ...++.++++|+.
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~g---~~v~~~~r~~~~--------~~---------------~~~~~~~~~~D~~ 57 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAAG---ATVVVCGRRAPE--------TV---------------DGRPAEFHAADVR 57 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCChhh--------hh---------------cCCceEEEEccCC
Confidence 568999999999999999999999998 588998886521 00 1246788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc----CCCCCce
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC----VNLKRFC 175 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v 175 (177)
+. +++..+++ ++|++|||||... ..+.++..+++|+.++..+++.+... .+..+||
T Consensus 58 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii 131 (252)
T PRK07856 58 DP------DQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIV 131 (252)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 97 55555543 5799999999642 13567788999999999999987641 1335677
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
++
T Consensus 132 ~i 133 (252)
T PRK07856 132 NI 133 (252)
T ss_pred EE
Confidence 64
No 113
>PRK09135 pteridine reductase; Provisional
Probab=99.47 E-value=6.6e-13 Score=100.86 Aligned_cols=112 Identities=15% Similarity=0.143 Sum_probs=81.7
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
.++++++||||+|+||++++++|++.| .+|++++|+... ..+.+...+.. .....+.++.+|++
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g---~~v~~~~r~~~~--~~~~~~~~~~~-----------~~~~~~~~~~~Dl~ 67 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAG---YRVAIHYHRSAA--EADALAAELNA-----------LRPGSAAALQADLL 67 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHH--HHHHHHHHHHh-----------hcCCceEEEEcCCC
Confidence 356899999999999999999999998 588988886421 11122111110 01135788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+. +++..+++ ++|+|||+||... ..++++.++++|+.++.++++++.+
T Consensus 68 ~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~ 129 (249)
T PRK09135 68 DP------DALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAP 129 (249)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHH
Confidence 97 56665554 5799999999642 1345777899999999999999864
No 114
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.47 E-value=1.5e-12 Score=98.73 Aligned_cols=117 Identities=19% Similarity=0.274 Sum_probs=84.1
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+|+||.++++.|++.| ..|+..+|+. +.+.+.... ...++.++.+|+.
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g---~~v~~~~~~~------~~~~~~~~~------------~~~~~~~~~~D~~ 62 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQG---AIVGLHGTRV------EKLEALAAE------------LGERVKIFPANLS 62 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEcCCH------HHHHHHHHH------------hCCceEEEEccCC
Confidence 467899999999999999999999998 4777766653 222222111 1136788899999
Q ss_pred CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489 114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE 176 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~ 176 (177)
+. +++..++ .++|++||+||... ..++++..+++|+.++.++++.+.+. .+..+||+
T Consensus 63 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 136 (245)
T PRK12936 63 DR------DEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIIN 136 (245)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 87 5555543 46899999999743 13567788999999999998876431 14567776
Q ss_pred C
Q psy17489 177 L 177 (177)
Q Consensus 177 v 177 (177)
+
T Consensus 137 ~ 137 (245)
T PRK12936 137 I 137 (245)
T ss_pred E
Confidence 4
No 115
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.47 E-value=1.4e-12 Score=99.69 Aligned_cols=120 Identities=17% Similarity=0.153 Sum_probs=86.5
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+|+||.++++.|++.| ++|+..+|+... ..+...+. . ....++.++.+|++
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G---~~vvl~~r~~~~--~~~~~~~l-~------------~~~~~~~~~~~Dl~ 68 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYG---AEIIINDITAER--AELAVAKL-R------------QEGIKAHAAPFNVT 68 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcC---CEEEEEcCCHHH--HHHHHHHH-H------------hcCCeEEEEecCCC
Confidence 578999999999999999999999999 588888886421 11111111 1 01245778899999
Q ss_pred CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489 114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE 176 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~ 176 (177)
++ +.+..++ .++|++||+||... ..++|+..+++|+.++..+++.+.+. .+..+||+
T Consensus 69 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 142 (254)
T PRK08085 69 HK------QEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIIN 142 (254)
T ss_pred CH------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 98 5555544 35899999999642 14677889999999999998877642 14457776
Q ss_pred C
Q psy17489 177 L 177 (177)
Q Consensus 177 v 177 (177)
+
T Consensus 143 i 143 (254)
T PRK08085 143 I 143 (254)
T ss_pred E
Confidence 4
No 116
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.47 E-value=7.9e-13 Score=101.17 Aligned_cols=106 Identities=17% Similarity=0.183 Sum_probs=82.2
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+++++++||||+|+||.++++.|++.| .+|++++|++... .... . . ....++.+|+
T Consensus 11 ~l~~k~~lITGas~gIG~ala~~l~~~G---~~Vi~~~r~~~~~-----~~~~-~-------------~-~~~~~~~~D~ 67 (245)
T PRK12367 11 TWQGKRIGITGASGALGKALTKAFRAKG---AKVIGLTHSKINN-----SESN-D-------------E-SPNEWIKWEC 67 (245)
T ss_pred hhCCCEEEEEcCCcHHHHHHHHHHHHCC---CEEEEEECCchhh-----hhhh-c-------------c-CCCeEEEeeC
Confidence 4678999999999999999999999999 6888888865211 1100 0 0 1125678999
Q ss_pred CCCCCCCCHHHHHHHhcCCcEEEEcCcccCc----hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 113 ESEHLGLSEDSEQLIKSKVNIIFHCAASLRF----DEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~----~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
++. +++...++++|++|||||.... .++++..+++|+.++.++++.+..
T Consensus 68 ~~~------~~~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 120 (245)
T PRK12367 68 GKE------ESLDKQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFED 120 (245)
T ss_pred CCH------HHHHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 988 6777888899999999997432 467788899999999999998754
No 117
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.47 E-value=2e-12 Score=98.41 Aligned_cols=107 Identities=15% Similarity=0.235 Sum_probs=80.1
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+.+++++||||+|+||.++++.|++.| ++|++++|+. +.+.+.... ...++.++++|++
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g---~~v~~~~r~~------~~~~~~~~~------------~~~~~~~~~~D~~ 62 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEG---ARVAITGRDP------ASLEAARAE------------LGESALVIRADAG 62 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEecCCH------HHHHHHHHH------------hCCceEEEEecCC
Confidence 457899999999999999999999999 5888888864 222221111 1246778899999
Q ss_pred CCCCCCCHHHHHHH-------hcCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 114 SEHLGLSEDSEQLI-------KSKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 114 ~~~~~~~~~~~~~~-------~~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+. +++..+ +.++|++||+||.... .+.++..+++|+.++.++++++.+
T Consensus 63 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 124 (249)
T PRK06500 63 DV------AAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLP 124 (249)
T ss_pred CH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 87 344333 3468999999997431 356777899999999999999975
No 118
>PRK08589 short chain dehydrogenase; Validated
Probab=99.47 E-value=5e-13 Score=103.51 Aligned_cols=119 Identities=12% Similarity=0.116 Sum_probs=84.4
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+|+||.++++.|++.| ++|++++|++ ...+...+... ...++.++.+|++
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G---~~vi~~~r~~---~~~~~~~~~~~-------------~~~~~~~~~~Dl~ 64 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEG---AYVLAVDIAE---AVSETVDKIKS-------------NGGKAKAYHVDIS 64 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCcH---HHHHHHHHHHh-------------cCCeEEEEEeecC
Confidence 568999999999999999999999999 6899988862 11122222111 1246788999999
Q ss_pred CCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc--------hHHHHHHHHHhHHHHHHHHHHHHhc--CCCCCcee
Q psy17489 114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF--------DEALQKAIRANLYATKQMLNLAKEC--VNLKRFCE 176 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~--------~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~ 176 (177)
+. +++..++ .++|++|||||.... .+.++..+++|+.++..+.+.+... .+-.++|+
T Consensus 65 ~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~ 138 (272)
T PRK08589 65 DE------QQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIIN 138 (272)
T ss_pred CH------HHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEE
Confidence 98 4555443 358999999997421 2457778999999998888776542 01146766
Q ss_pred C
Q psy17489 177 L 177 (177)
Q Consensus 177 v 177 (177)
+
T Consensus 139 i 139 (272)
T PRK08589 139 T 139 (272)
T ss_pred e
Confidence 4
No 119
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.47 E-value=7.6e-13 Score=96.46 Aligned_cols=96 Identities=28% Similarity=0.427 Sum_probs=81.9
Q ss_pred EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489 39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG 118 (177)
Q Consensus 39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 118 (177)
|+|+||+|++|+.+++.|++.| ++|+++.|++.. +.+ ..+++++.+|+.+.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~---~~V~~~~R~~~~------~~~-----------------~~~~~~~~~d~~d~--- 51 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRG---HEVTALVRSPSK------AED-----------------SPGVEIIQGDLFDP--- 51 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT---SEEEEEESSGGG------HHH-----------------CTTEEEEESCTTCH---
T ss_pred eEEECCCChHHHHHHHHHHHCC---CEEEEEecCchh------ccc-----------------ccccccceeeehhh---
Confidence 7999999999999999999998 699999998632 111 26899999999998
Q ss_pred CCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 119 LSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 119 ~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+.+..+++++|.||++++.... ....+.+++++++++ +++|||++
T Consensus 52 ---~~~~~al~~~d~vi~~~~~~~~----------~~~~~~~~~~a~~~~-~~~~~v~~ 96 (183)
T PF13460_consen 52 ---DSVKAALKGADAVIHAAGPPPK----------DVDAAKNIIEAAKKA-GVKRVVYL 96 (183)
T ss_dssp ---HHHHHHHTTSSEEEECCHSTTT----------HHHHHHHHHHHHHHT-TSSEEEEE
T ss_pred ---hhhhhhhhhcchhhhhhhhhcc----------ccccccccccccccc-ccccceee
Confidence 8899999999999999986443 167788999999998 89999874
No 120
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.47 E-value=6.1e-13 Score=101.79 Aligned_cols=110 Identities=14% Similarity=0.158 Sum_probs=81.8
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+|+||.++++.|++.| .+|++.+|+... . +.+.+.+.. ...++.++.+|++
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~l~~------------~~~~~~~~~~D~~ 68 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAG---AQVAIAARHLDA--L-EKLADEIGT------------SGGKVVPVCCDVS 68 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCHHH--H-HHHHHHHHh------------cCCeEEEEEccCC
Confidence 568999999999999999999999999 588888886421 1 122211110 1246778899999
Q ss_pred CCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
++ +++..++ .++|++|||||.... .+.++..+++|+.++..+++.+..
T Consensus 69 ~~------~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 130 (253)
T PRK05867 69 QH------QQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAK 130 (253)
T ss_pred CH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHH
Confidence 98 5555543 378999999997532 356777899999999999988754
No 121
>PRK09186 flagellin modification protein A; Provisional
Probab=99.47 E-value=1.6e-12 Score=99.36 Aligned_cols=121 Identities=16% Similarity=0.241 Sum_probs=83.4
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+|+||.++++.|++.| ++|+.++|+... .++...+.... . ....+.++.+|++
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g---~~v~~~~r~~~~--~~~~~~~l~~~---------~--~~~~~~~~~~Dl~ 65 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAG---GIVIAADIDKEA--LNELLESLGKE---------F--KSKKLSLVELDIT 65 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEecChHH--HHHHHHHHHhh---------c--CCCceeEEEecCC
Confidence 568999999999999999999999999 588888886521 11111111000 0 0134667799999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC----------chHHHHHHHHHhHHHHHHHHHHHHh----cCCCC
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR----------FDEALQKAIRANLYATKQMLNLAKE----CVNLK 172 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~----------~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~ 172 (177)
++ +++..+++ ++|++||||+... ..+.+...+++|+.++..+++++.+ . +.+
T Consensus 66 d~------~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~ 138 (256)
T PRK09186 66 DQ------ESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQ-GGG 138 (256)
T ss_pred CH------HHHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-CCc
Confidence 98 56666554 4899999997531 1245667889999988877776543 3 556
Q ss_pred CceeC
Q psy17489 173 RFCEL 177 (177)
Q Consensus 173 ~~v~v 177 (177)
+||++
T Consensus 139 ~iv~~ 143 (256)
T PRK09186 139 NLVNI 143 (256)
T ss_pred eEEEE
Confidence 88774
No 122
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.46 E-value=1.8e-12 Score=99.97 Aligned_cols=121 Identities=12% Similarity=0.168 Sum_probs=86.0
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+|+||.++++.|++.| ++|++.+|+... . +.+.+.+.. ....++.++.+|++
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~~-----------~~~~~~~~~~~Dv~ 68 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAG---ADVILLSRNEEN--L-KKAREKIKS-----------ESNVDVSYIVADLT 68 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHh-----------hcCCceEEEEecCC
Confidence 578999999999999999999999999 588888886421 1 111111110 01246888999999
Q ss_pred CCCCCCCHHHHHHHhc------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489 114 SEHLGLSEDSEQLIKS------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL 177 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v 177 (177)
++ ++++.+++ ++|++|||||... ..++|+..+++|+.++..+.+.+... .+..++|++
T Consensus 69 ~~------~~i~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~i 142 (263)
T PRK08339 69 KR------EDLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYS 142 (263)
T ss_pred CH------HHHHHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 98 55555543 6899999999642 14678889999999988887765431 144577764
No 123
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.46 E-value=1.9e-12 Score=98.97 Aligned_cols=109 Identities=14% Similarity=0.148 Sum_probs=79.5
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
.|+++||||+|+||.++++.|++.| ++|++++|+.... . ....+... ....++.++.+|++++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g---~~vi~~~r~~~~~-~-~~~~~~~~------------~~~~~~~~~~~D~~~~ 64 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAG---FDLAINDRPDDEE-L-AATQQELR------------ALGVEVIFFPADVADL 64 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCC---CEEEEEecCchhH-H-HHHHHHHH------------hcCCceEEEEecCCCH
Confidence 4789999999999999999999998 5888888764211 1 11111111 0124688999999997
Q ss_pred CCCCCHHHHHHHh-------cCCcEEEEcCcccC---------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 116 HLGLSEDSEQLIK-------SKVNIIFHCAASLR---------FDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 116 ~~~~~~~~~~~~~-------~~~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+++..++ .++|++||+||... ..+.++..+++|+.++.++++.+.+
T Consensus 65 ------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 126 (256)
T PRK12745 65 ------SAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAK 126 (256)
T ss_pred ------HHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHH
Confidence 5555443 36899999998642 1356778899999999999888754
No 124
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.46 E-value=6.6e-13 Score=101.14 Aligned_cols=120 Identities=18% Similarity=0.197 Sum_probs=83.8
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEE-EEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYI-MVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
+.+++++||||+|+||.++++.|++.| ++|++ ..|+... ..+...+. . ....++.++.+|+
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g---~~v~~~~~r~~~~--~~~~~~~~-~------------~~~~~~~~~~~D~ 63 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEG---YDIAVNYARSRKA--AEETAEEI-E------------ALGRKALAVKANV 63 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHHH--HHHHHHHH-H------------hcCCeEEEEEcCC
Confidence 357899999999999999999999998 46665 3554311 11111111 1 0124678899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489 113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFC 175 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v 175 (177)
+++ +++..+++ ++|+|||+||.... .+.++..+++|+.++.++++++.+. .+.++||
T Consensus 64 ~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv 137 (250)
T PRK08063 64 GDV------EKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKII 137 (250)
T ss_pred CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEE
Confidence 998 55655544 58999999986431 3455667899999999999888653 1456888
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
++
T Consensus 138 ~~ 139 (250)
T PRK08063 138 SL 139 (250)
T ss_pred EE
Confidence 74
No 125
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.46 E-value=1.6e-12 Score=99.71 Aligned_cols=116 Identities=9% Similarity=0.204 Sum_probs=83.0
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+++++||||+|+||.++++.|++.| .+|++++|+. +.+.+.... .... .++.++.+|+++.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G---~~v~~~~r~~------~~~~~~~~~---------~~~~-~~~~~~~~Dl~~~ 62 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQG---ATLGLVARRT------DALQAFAAR---------LPKA-ARVSVYAADVRDA 62 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHh---------cccC-CeeEEEEcCCCCH
Confidence 4799999999999999999999998 5889998864 222222110 0111 2688899999997
Q ss_pred CCCCCHHHHHHHhc-------CCcEEEEcCcccCc--------hHHHHHHHHHhHHHHHHHHHH----HHhcCCCCCcee
Q psy17489 116 HLGLSEDSEQLIKS-------KVNIIFHCAASLRF--------DEALQKAIRANLYATKQMLNL----AKECVNLKRFCE 176 (177)
Q Consensus 116 ~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~--------~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~v~ 176 (177)
+++.++++ .+|++||+||.... .+.++..+++|+.++.++++. +++. +..+||+
T Consensus 63 ------~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~-~~~~iv~ 135 (257)
T PRK07024 63 ------DALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA-RRGTLVG 135 (257)
T ss_pred ------HHHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc-CCCEEEE
Confidence 56655543 47999999997431 245777899999999998774 4444 4566765
Q ss_pred C
Q psy17489 177 L 177 (177)
Q Consensus 177 v 177 (177)
+
T Consensus 136 i 136 (257)
T PRK07024 136 I 136 (257)
T ss_pred E
Confidence 3
No 126
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.46 E-value=2.2e-12 Score=99.96 Aligned_cols=121 Identities=15% Similarity=0.214 Sum_probs=84.5
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+++++++||||+|+||.++++.|++.| ++|++++|+... .++...+. . ....++.++++|+
T Consensus 7 ~~~~k~vlVtGas~giG~~ia~~l~~~G---~~V~~~~r~~~~--~~~~~~~~-~------------~~~~~~~~~~~Dl 68 (278)
T PRK08277 7 SLKGKVAVITGGGGVLGGAMAKELARAG---AKVAILDRNQEK--AEAVVAEI-K------------AAGGEALAVKADV 68 (278)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHH--HHHHHHHH-H------------hcCCeEEEEECCC
Confidence 3578999999999999999999999999 588888886421 11111111 1 0124678899999
Q ss_pred CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc----------------------hHHHHHHHHHhHHHHHHHHH
Q psy17489 113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF----------------------DEALQKAIRANLYATKQMLN 163 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~----------------------~~~~~~~~~~nv~~~~~ll~ 163 (177)
.+. +.+..++ .++|++||+||.... .++++..+++|+.++..+++
T Consensus 69 ~~~------~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 142 (278)
T PRK08277 69 LDK------ESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQ 142 (278)
T ss_pred CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHH
Confidence 997 4554443 378999999995321 35677889999999987776
Q ss_pred HHHhc---CCCCCceeC
Q psy17489 164 LAKEC---VNLKRFCEL 177 (177)
Q Consensus 164 ~~~~~---~~~~~~v~v 177 (177)
.+.+. .+..+||++
T Consensus 143 ~~~~~~~~~~~g~ii~i 159 (278)
T PRK08277 143 VFAKDMVGRKGGNIINI 159 (278)
T ss_pred HHHHHHHhcCCcEEEEE
Confidence 65331 134567764
No 127
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.46 E-value=1.2e-12 Score=100.14 Aligned_cols=118 Identities=14% Similarity=0.131 Sum_probs=85.7
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+.+|+++||||+++||.++++.|++.| .+|++.+|++. +...+.... ...++.++.+|++
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G---~~vv~~~~~~~-----~~~~~~~~~------------~~~~~~~~~~Dl~ 65 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAG---ADIVGVGVAEA-----PETQAQVEA------------LGRKFHFITADLI 65 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEecCchH-----HHHHHHHHH------------cCCeEEEEEeCCC
Confidence 568999999999999999999999999 57887777431 112211111 1246788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc----CCCCCce
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC----VNLKRFC 175 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v 175 (177)
+. +++..+++ ++|++|||||... ..+.|+..+++|+.++..+.+.+.+. +.-.++|
T Consensus 66 ~~------~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii 139 (251)
T PRK12481 66 QQ------KDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKII 139 (251)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEE
Confidence 98 56655543 6899999999743 13678889999999999998876542 1134677
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
++
T Consensus 140 ~i 141 (251)
T PRK12481 140 NI 141 (251)
T ss_pred Ee
Confidence 64
No 128
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.46 E-value=2.1e-12 Score=99.81 Aligned_cols=115 Identities=15% Similarity=0.122 Sum_probs=83.3
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+|+||.++++.|++.| .+|++.+|++ +.+.+... ...++.++.+|++
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G---~~v~~~~r~~------~~~~~~~~-------------~~~~~~~~~~D~~ 60 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALG---ARVAIGDLDE------ALAKETAA-------------ELGLVVGGPLDVT 60 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHH-------------HhccceEEEccCC
Confidence 457899999999999999999999999 5788888864 22222111 0124778899999
Q ss_pred CCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCce
Q psy17489 114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAK----ECVNLKRFC 175 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v 175 (177)
++ +++..++ .++|++|||||.... .+.+...+++|+.++..+.+.+. +. +..+||
T Consensus 61 ~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv 133 (273)
T PRK07825 61 DP------ASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR-GRGHVV 133 (273)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEE
Confidence 97 4544433 468999999997532 34567789999999999877764 33 455677
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
++
T Consensus 134 ~i 135 (273)
T PRK07825 134 NV 135 (273)
T ss_pred EE
Confidence 64
No 129
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.46 E-value=2.7e-12 Score=98.32 Aligned_cols=114 Identities=17% Similarity=0.258 Sum_probs=81.4
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+|+||.++++.|.+.| ++|+++.++.. +....... .++.++.+|++
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~G---~~v~~~~~~~~-----~~~~~l~~---------------~~~~~~~~Dl~ 61 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLREG---AKVAVLYNSAE-----NEAKELRE---------------KGVFTIKCDVG 61 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCcH-----HHHHHHHh---------------CCCeEEEecCC
Confidence 568999999999999999999999999 57777766432 11111111 24678899999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCce
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRFC 175 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v 175 (177)
++ +++..+++ ++|++|||||... ..+.++..+++|+.++..+.+.+. +. +..++|
T Consensus 62 ~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv 134 (255)
T PRK06463 62 NR------DQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS-KNGAIV 134 (255)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEE
Confidence 98 55655543 6899999999742 135677789999999877755543 33 445777
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
++
T Consensus 135 ~i 136 (255)
T PRK06463 135 NI 136 (255)
T ss_pred EE
Confidence 64
No 130
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.46 E-value=2.7e-12 Score=97.28 Aligned_cols=121 Identities=16% Similarity=0.210 Sum_probs=86.2
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+|+||.++++.|++.| ++|+++.|+... .. +.+.+.... ...++.++.+|+.
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~G---~~v~~~~~~~~~-~~-~~~~~~~~~------------~~~~~~~~~~Dl~ 65 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQG---ANVVINYASSEA-GA-EALVAEIGA------------LGGKALAVQGDVS 65 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCchh-HH-HHHHHHHHh------------cCCceEEEEcCCC
Confidence 467899999999999999999999999 578777776431 11 122211110 1246788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE 176 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~ 176 (177)
+. +++..+++ ++|+|||+||.... .+.++..+++|+.++.++++.+... .+.++|||
T Consensus 66 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~ 139 (248)
T PRK05557 66 DA------ESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIIN 139 (248)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 98 55555443 68999999997432 3456678899999999998888653 14556777
Q ss_pred C
Q psy17489 177 L 177 (177)
Q Consensus 177 v 177 (177)
+
T Consensus 140 i 140 (248)
T PRK05557 140 I 140 (248)
T ss_pred E
Confidence 4
No 131
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.46 E-value=6e-13 Score=101.34 Aligned_cols=121 Identities=16% Similarity=0.105 Sum_probs=85.4
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+.+++++||||+|+||.++++.|++.| .+|++++|+... .. +.+...... ...++.++.+|++
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G---~~V~~~~r~~~~-~~-~~~~~~l~~------------~~~~~~~~~~D~~ 66 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAG---AHVVVNYRQKAP-RA-NKVVAEIEA------------AGGRASAVGADLT 66 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCC---CEEEEEeCCchH-hH-HHHHHHHHh------------cCCceEEEEcCCC
Confidence 457899999999999999999999998 588888886421 11 222211110 1246788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCceeC
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC-VNLKRFCEL 177 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~v 177 (177)
+. +++..+++ ++|++||+|+.... ..++...+++|+.++.++++.+.+. ....+||++
T Consensus 67 ~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~i 133 (248)
T PRK07806 67 DE------ESVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFV 133 (248)
T ss_pred CH------HHHHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEE
Confidence 98 56655543 58999999986422 2234567889999999999999864 122477764
No 132
>PRK08643 acetoin reductase; Validated
Probab=99.46 E-value=2.1e-12 Score=98.79 Aligned_cols=108 Identities=16% Similarity=0.155 Sum_probs=79.1
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+|+++||||+|+||.++++.|++.| .+|++++|+... . +.+...... ...++.++++|++++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G---~~v~~~~r~~~~--~-~~~~~~~~~------------~~~~~~~~~~Dl~~~ 63 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDG---FKVAIVDYNEET--A-QAAADKLSK------------DGGKAIAVKADVSDR 63 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHh------------cCCeEEEEECCCCCH
Confidence 6899999999999999999999999 589988886521 1 112111110 124678899999998
Q ss_pred CCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 116 HLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 116 ~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+.+..+++ ++|++|||||.... .+.++..+++|+.++..+++.+.+
T Consensus 64 ------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 123 (256)
T PRK08643 64 ------DQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQE 123 (256)
T ss_pred ------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 55555443 68999999987431 356777899999999888777654
No 133
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.45 E-value=2e-12 Score=99.55 Aligned_cols=112 Identities=14% Similarity=0.141 Sum_probs=85.2
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+++|+++||||+|+||.++++.|++.| .+|++.+|++... ...++.++.+|+
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~G---~~v~~~~~~~~~~------------------------~~~~~~~~~~D~ 58 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLANG---ANVVNADIHGGDG------------------------QHENYQFVPTDV 58 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCcccc------------------------ccCceEEEEccC
Confidence 3578999999999999999999999999 6888888865321 113577899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC----------------chHHHHHHHHHhHHHHHHHHHHHHhc-
Q psy17489 113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR----------------FDEALQKAIRANLYATKQMLNLAKEC- 168 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~----------------~~~~~~~~~~~nv~~~~~ll~~~~~~- 168 (177)
+++ +++..+++ ++|++||+||... ..+.|+..+++|+.++..+++++...
T Consensus 59 ~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 132 (266)
T PRK06171 59 SSA------EEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQM 132 (266)
T ss_pred CCH------HHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHH
Confidence 998 55655443 6899999999632 13567778999999999999887653
Q ss_pred --CCCCCceeC
Q psy17489 169 --VNLKRFCEL 177 (177)
Q Consensus 169 --~~~~~~v~v 177 (177)
.+..+||++
T Consensus 133 ~~~~~g~iv~i 143 (266)
T PRK06171 133 VKQHDGVIVNM 143 (266)
T ss_pred HhcCCcEEEEE
Confidence 133456653
No 134
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.45 E-value=3.2e-12 Score=99.10 Aligned_cols=116 Identities=10% Similarity=0.122 Sum_probs=83.7
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCC-ChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS-SPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
+++++++||||+|+||.++++.|++.| .+|++++|+.... .....+.....+ + .....++.++.+|+
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~-----~----~~~~~~~~~~~~D~ 71 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARDG---ANIVIAAKTAEPHPKLPGTIHTAAEE-----I----EAAGGQALPLVGDV 71 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEecccccccchhhHHHHHHHH-----H----HhcCCceEEEEecC
Confidence 467899999999999999999999998 5889888875321 111112111110 0 00124688899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
++. +++..+++ ++|++||+||.... .+.++..+++|+.++.++++++..
T Consensus 72 ~~~------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~ 134 (273)
T PRK08278 72 RDE------DQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLP 134 (273)
T ss_pred CCH------HHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHH
Confidence 998 56655543 68999999997431 356777899999999999998864
No 135
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.45 E-value=6.3e-13 Score=101.82 Aligned_cols=115 Identities=17% Similarity=0.244 Sum_probs=85.3
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
..+|+++||||+|++|+++++.|++.| ++|+++.|+... ...... ...++.++.+|+.
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g---~~V~~~~R~~~~------~~~~~~-------------~~~~~~~~~~Dl~ 72 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKG---FAVKAGVRDVDK------AKTSLP-------------QDPSLQIVRADVT 72 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCC---CEEEEEecCHHH------HHHhcc-------------cCCceEEEEeeCC
Confidence 356899999999999999999999998 588988887521 111100 1236889999998
Q ss_pred CCCCCCCHHHHHHHh-cCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 114 SEHLGLSEDSEQLIK-SKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~-~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+.. +.+...+ .++|+||++++...... ....+++|..++.++++++++. +++||||+
T Consensus 73 d~~-----~~l~~~~~~~~d~vi~~~g~~~~~~-~~~~~~~n~~~~~~ll~a~~~~-~~~~iV~i 130 (251)
T PLN00141 73 EGS-----DKLVEAIGDDSDAVICATGFRRSFD-PFAPWKVDNFGTVNLVEACRKA-GVTRFILV 130 (251)
T ss_pred CCH-----HHHHHHhhcCCCEEEECCCCCcCCC-CCCceeeehHHHHHHHHHHHHc-CCCEEEEE
Confidence 741 4566666 58999999998642211 1223578899999999999987 88899985
No 136
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.45 E-value=2.4e-12 Score=102.58 Aligned_cols=109 Identities=15% Similarity=0.262 Sum_probs=81.1
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+|+||.++++.|.+.| ++|++++|++.. . +.+.+... ....++.++.+|++
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G---~~Vvl~~R~~~~--l-~~~~~~~~------------~~g~~~~~~~~Dv~ 66 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRG---ARLVLAARDEEA--L-QAVAEECR------------ALGAEVLVVPTDVT 66 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH--H-HHHHHHHH------------hcCCcEEEEEeeCC
Confidence 568999999999999999999999999 588988886521 1 11111111 12346778899999
Q ss_pred CCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHH
Q psy17489 114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAK 166 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~ 166 (177)
+. ++++.++ .++|++|||||.... .+.++..+++|+.++.++.+.+.
T Consensus 67 d~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~l 127 (330)
T PRK06139 67 DA------DQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAAL 127 (330)
T ss_pred CH------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHH
Confidence 98 5666554 468999999996432 35677789999999999887764
No 137
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.45 E-value=3.4e-12 Score=97.88 Aligned_cols=112 Identities=12% Similarity=0.161 Sum_probs=80.4
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
..+|+++||||+|+||.++++.|++.| .+|+++.++... .. +.+...... ...++.++.+|++
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g---~~v~~~~~~~~~-~~-~~~~~~~~~------------~~~~~~~~~~Dl~ 69 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHG---FDVAVHYNRSRD-EA-EALAAEIRA------------LGRRAVALQADLA 69 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCCHH-HH-HHHHHHHHh------------cCCeEEEEEcCCC
Confidence 357899999999999999999999998 577776664321 11 111111110 1246888999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
+. +++..+++ ++|+||||||... ..+.++..+++|+.++.++++.+...
T Consensus 70 d~------~~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 132 (258)
T PRK09134 70 DE------AEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARA 132 (258)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 98 55555443 5899999999643 23567788999999999999987653
No 138
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.45 E-value=1.7e-12 Score=98.18 Aligned_cols=119 Identities=19% Similarity=0.210 Sum_probs=85.0
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+.+++++||||+|++|.++++.|++.| .+|++++|++.. . ..+.+.+. .. .++.++.+|+.
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g---~~V~~~~r~~~~--~-~~~~~~l~------------~~-~~~~~~~~D~~ 64 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEG---YKVAITARDQKE--L-EEAAAELN------------NK-GNVLGLAADVR 64 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCC---CEEEEeeCCHHH--H-HHHHHHHh------------cc-CcEEEEEccCC
Confidence 357899999999999999999999998 589999886521 1 11211111 01 46888999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc--CCCCCceeC
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC--VNLKRFCEL 177 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~v 177 (177)
+. +++..+++ ++|+|||+++.... .+.+++.+++|+.++.++++++.+. .+.+++|++
T Consensus 65 ~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ 138 (237)
T PRK07326 65 DE------ADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINI 138 (237)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEE
Confidence 87 55555443 68999999987532 3456678999999999998887642 134567653
No 139
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.45 E-value=3e-12 Score=97.97 Aligned_cols=119 Identities=15% Similarity=0.178 Sum_probs=86.4
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+|+||+++++.|++.| ++|++++|++.. . +.+...+.. ...++.++.+|++
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G---~~v~~~~r~~~~--~-~~~~~~~~~------------~~~~~~~~~~Dl~ 70 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAG---AHVLVNGRNAAT--L-EAAVAALRA------------AGGAAEALAFDIA 70 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcC---CeEEEEeCCHHH--H-HHHHHHHHh------------cCCceEEEEccCC
Confidence 578999999999999999999999999 589999987521 1 111111110 1246888999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh----cCCCCCce
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE----CVNLKRFC 175 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v 175 (177)
++ +++..+++ ++|++||++|.... .+++++.+++|+.++..+.+.+.+ . +..+||
T Consensus 71 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv 143 (256)
T PRK06124 71 DE------EAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQ-GYGRII 143 (256)
T ss_pred CH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEE
Confidence 97 55555443 57999999997431 356778899999999999977654 3 456777
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
++
T Consensus 144 ~~ 145 (256)
T PRK06124 144 AI 145 (256)
T ss_pred EE
Confidence 63
No 140
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.45 E-value=2.6e-12 Score=99.22 Aligned_cols=116 Identities=14% Similarity=0.118 Sum_probs=83.2
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+++||||+|+||.++++.|++.| .+|++.+|+... .++.+..... ...++.++.+|+.+.
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g---~~V~~~~r~~~~--~~~~~~~l~~-------------~~~~~~~~~~D~~~~- 61 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREG---WRLALADVNEEG--GEETLKLLRE-------------AGGDGFYQRCDVRDY- 61 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCC---CEEEEEeCCHHH--HHHHHHHHHh-------------cCCceEEEEccCCCH-
Confidence 479999999999999999999999 588888886421 1122221111 124678899999987
Q ss_pred CCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCceeC
Q psy17489 117 LGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLA----KECVNLKRFCEL 177 (177)
Q Consensus 117 ~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~v 177 (177)
+++..++ .++|++||+||.... .+.++..+++|+.++.++.+.+ ++. +..+||++
T Consensus 62 -----~~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~v 134 (270)
T PRK05650 62 -----SQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ-KSGRIVNI 134 (270)
T ss_pred -----HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CCCEEEEE
Confidence 4555544 368999999997532 3567778999999988877664 444 56677764
No 141
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.45 E-value=2.6e-12 Score=98.99 Aligned_cols=119 Identities=13% Similarity=0.129 Sum_probs=86.1
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+.+|+++||||+|+||.+++++|++.| ++|++++|+... . +...+... ....++.++++|++
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G---~~vv~~~~~~~~--~-~~~~~~~~------------~~~~~~~~~~~Dl~ 69 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAG---ATIVFNDINQEL--V-DKGLAAYR------------ELGIEAHGYVCDVT 69 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeCCHHH--H-HHHHHHHH------------hcCCceEEEEcCCC
Confidence 468999999999999999999999999 578888776421 1 11111111 01246888999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh----cCCCCCce
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE----CVNLKRFC 175 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v 175 (177)
+. +++..+++ ++|++||+||... ..+.++..+++|+.++..+.+.+.. . +..+||
T Consensus 70 ~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv 142 (265)
T PRK07097 70 DE------DGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK-GHGKII 142 (265)
T ss_pred CH------HHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCcEEE
Confidence 98 56665543 5899999999753 2356777899999999988877653 3 456777
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
++
T Consensus 143 ~i 144 (265)
T PRK07097 143 NI 144 (265)
T ss_pred EE
Confidence 64
No 142
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.44 E-value=2.8e-12 Score=97.36 Aligned_cols=121 Identities=12% Similarity=0.171 Sum_probs=85.3
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
.++++++||||+|+||+++++.|++.| ++++...|+... .. +.+.+... ....++.++.+|+.
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g---~~v~~~~~~~~~-~~-~~~~~~~~------------~~~~~~~~~~~Dl~ 65 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADG---FAVAVNYAGSAA-AA-DELVAEIE------------AAGGRAIAVQADVA 65 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEecCCCHH-HH-HHHHHHHH------------hcCCeEEEEECCCC
Confidence 467899999999999999999999999 477766664321 11 11111111 01246888999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCceeC
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC-VNLKRFCEL 177 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~v 177 (177)
+. +++.++++ ++|++||+||.... .+.++..+++|+.++.++++.+.+. ....+||++
T Consensus 66 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ 138 (245)
T PRK12937 66 DA------AAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINL 138 (245)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEE
Confidence 97 56666554 68999999997431 3567778999999999999888653 122366653
No 143
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.44 E-value=3.8e-13 Score=105.39 Aligned_cols=93 Identities=18% Similarity=0.183 Sum_probs=73.4
Q ss_pred EEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCCC
Q psy17489 40 LVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLGL 119 (177)
Q Consensus 40 lVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~ 119 (177)
|||||+||||++|++.|++.|+ .|++..+. ..+|+.+.
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~---~v~~~~~~-----------------------------------~~~Dl~~~---- 38 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGF---TNLVLRTH-----------------------------------KELDLTRQ---- 38 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCC---cEEEeecc-----------------------------------ccCCCCCH----
Confidence 6999999999999999999984 45543221 14688887
Q ss_pred CHHHHHHHhc--CCcEEEEcCcccCc----hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 120 SEDSEQLIKS--KVNIIFHCAASLRF----DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 120 ~~~~~~~~~~--~~d~vi~~aa~~~~----~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+.+..+++ ++|+|||+|+..+. ......++++|+.++.+++++|+++ ++++|||+
T Consensus 39 --~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~ 99 (306)
T PLN02725 39 --ADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRH-GVKKLLFL 99 (306)
T ss_pred --HHHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHc-CCCeEEEe
Confidence 67777766 57999999997542 2344567899999999999999998 89999984
No 144
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.44 E-value=3e-12 Score=99.14 Aligned_cols=102 Identities=13% Similarity=0.207 Sum_probs=77.8
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+|+++||||+|+||.++++.|.+.| .+|++++|+.. .+..... .++.++.+|+++.
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G---~~V~~~~r~~~------~~~~~~~---------------~~~~~~~~Dl~~~ 56 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAG---YEVWATARKAE------DVEALAA---------------AGFTAVQLDVNDG 56 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHH---------------CCCeEEEeeCCCH
Confidence 3689999999999999999999998 68999888642 2222111 2467888999987
Q ss_pred CCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 116 HLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 116 ~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+.+..++ .++|++||+||.... .+.++..+++|+.++.++++.+..
T Consensus 57 ------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 116 (274)
T PRK05693 57 ------AALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFP 116 (274)
T ss_pred ------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 5555544 368999999996431 356777899999999999988743
No 145
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.44 E-value=2.9e-12 Score=97.90 Aligned_cols=121 Identities=19% Similarity=0.208 Sum_probs=80.7
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+|+||.++++.|++.| ++|++..++.. ....+...+. . ....++..+.+|+.
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G---~~v~~~~~~~~-~~~~~~~~~~-~------------~~~~~~~~~~~D~~ 64 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDG---ALVAIHYGNRK-EEAEETVYEI-Q------------SNGGSAFSIGANLE 64 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CeEEEEcCCCH-HHHHHHHHHH-H------------hcCCceEEEecccC
Confidence 568999999999999999999999999 57776643321 1111111111 1 01235677889998
Q ss_pred CCCCCCCHHHHHHHh-------------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc-CCCC
Q psy17489 114 SEHLGLSEDSEQLIK-------------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC-VNLK 172 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~-------------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~ 172 (177)
+. +++..++ .++|++|||||.... .+.|+..+++|+.++..+++.+.+. .+..
T Consensus 65 ~~------~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g 138 (252)
T PRK12747 65 SL------HGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNS 138 (252)
T ss_pred CH------HHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCC
Confidence 86 2332211 168999999996421 3457888999999999999887653 1224
Q ss_pred CceeC
Q psy17489 173 RFCEL 177 (177)
Q Consensus 173 ~~v~v 177 (177)
+||++
T Consensus 139 ~iv~i 143 (252)
T PRK12747 139 RIINI 143 (252)
T ss_pred eEEEE
Confidence 67764
No 146
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.44 E-value=2.2e-12 Score=98.55 Aligned_cols=119 Identities=12% Similarity=0.161 Sum_probs=84.5
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+|+||.+++++|++.| .+|++++|++.. . +.+.+.+.. ...++.++.+|++
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~G---~~v~~~~r~~~~--~-~~~~~~~~~------------~~~~~~~~~~D~~ 66 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFAREG---AKVVVADRDAAG--G-EETVALIRE------------AGGEALFVACDVT 66 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcC---CEEEEEeCCHHH--H-HHHHHHHHh------------cCCceEEEEcCCC
Confidence 568999999999999999999999998 589999887532 1 111111110 1246888999999
Q ss_pred CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCc
Q psy17489 114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRF 174 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~ 174 (177)
+. +++..++ .++|++||+||... ..+++++.+++|+.++..+++.+. +. +..++
T Consensus 67 ~~------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~i 139 (253)
T PRK06172 67 RD------AEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ-GGGAI 139 (253)
T ss_pred CH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEE
Confidence 97 4555544 36799999999642 135677789999999988876543 33 44566
Q ss_pred eeC
Q psy17489 175 CEL 177 (177)
Q Consensus 175 v~v 177 (177)
|++
T Consensus 140 i~~ 142 (253)
T PRK06172 140 VNT 142 (253)
T ss_pred EEE
Confidence 653
No 147
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.44 E-value=1.5e-12 Score=98.86 Aligned_cols=119 Identities=14% Similarity=0.046 Sum_probs=84.9
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
++|+++||||+|++|.++++.|+++| .+|++++|++.. . +.+.+.... ...++.++.+|+++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~~------------~~~~~~~~~~D~~~ 66 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAG---WDLALVARSQDA--L-EALAAELRS------------TGVKAAAYSIDLSN 66 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHh------------CCCcEEEEEccCCC
Confidence 46899999999999999999999999 589999986521 1 122211110 12468889999999
Q ss_pred CCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489 115 EHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL 177 (177)
Q Consensus 115 ~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v 177 (177)
. +.+..+++ ++|++||+||.... .+.++..+++|+.++.++++.+... .+..+||++
T Consensus 67 ~------~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~i 140 (241)
T PRK07454 67 P------EAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINV 140 (241)
T ss_pred H------HHHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 8 55555443 58999999997431 2466778999999999988776331 145677764
No 148
>PRK12320 hypothetical protein; Provisional
Probab=99.44 E-value=1e-12 Score=112.74 Aligned_cols=100 Identities=16% Similarity=0.198 Sum_probs=79.6
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+|+||||+||||+++++.|++.| ++|++++|.+... ...+++++.+|+.+.
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G---~~Vi~ldr~~~~~------------------------~~~~ve~v~~Dl~d~- 52 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAG---HTVSGIAQHPHDA------------------------LDPRVDYVCASLRNP- 52 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC---CEEEEEeCChhhc------------------------ccCCceEEEccCCCH-
Confidence 479999999999999999999998 5899998854210 114678999999986
Q ss_pred CCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 117 LGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
.+..++.++|+|||+|+.... ....+|+.++.+++++|++. ++ ++||+
T Consensus 53 ------~l~~al~~~D~VIHLAa~~~~-----~~~~vNv~Gt~nLleAA~~~-Gv-RiV~~ 100 (699)
T PRK12320 53 ------VLQELAGEADAVIHLAPVDTS-----APGGVGITGLAHVANAAARA-GA-RLLFV 100 (699)
T ss_pred ------HHHHHhcCCCEEEEcCccCcc-----chhhHHHHHHHHHHHHHHHc-CC-eEEEE
Confidence 366777899999999986421 12358999999999999998 66 68774
No 149
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.44 E-value=1.2e-12 Score=93.90 Aligned_cols=118 Identities=18% Similarity=0.298 Sum_probs=86.7
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+++||||++.||..+++.|++.|. ..|+.++|++.. +...++..+ ......++.++++|+++.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~--~~v~~~~r~~~~----~~~~~l~~~---------l~~~~~~~~~~~~D~~~~- 64 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGA--RVVILTSRSEDS----EGAQELIQE---------LKAPGAKITFIECDLSDP- 64 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTT--EEEEEEESSCHH----HHHHHHHHH---------HHHTTSEEEEEESETTSH-
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCc--eEEEEeeecccc----ccccccccc---------cccccccccccccccccc-
Confidence 6899999999999999999999963 578888887111 222222111 011236789999999998
Q ss_pred CCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489 117 LGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKECVNLKRFCE 176 (177)
Q Consensus 117 ~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~ 176 (177)
++++.+++ .+|++|||||... ..+.+++.+++|+.+...+.+.+... +-.++|+
T Consensus 65 -----~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~g~iv~ 132 (167)
T PF00106_consen 65 -----ESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQ-GGGKIVN 132 (167)
T ss_dssp -----HHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHH-TTEEEEE
T ss_pred -----ccccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehheec-cccceEE
Confidence 56665543 6899999999864 24667789999999999999998874 5556665
No 150
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.44 E-value=5.4e-12 Score=96.05 Aligned_cols=119 Identities=15% Similarity=0.070 Sum_probs=84.1
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+++++||||+|+||.+++++|++.| .+|++.+|+... . +.+...... .....++.++.+|+++.
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g---~~v~~~~r~~~~--~-~~~~~~~~~----------~~~~~~~~~~~~D~~~~ 65 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKG---RDLALCARRTDR--L-EELKAELLA----------RYPGIKVAVAALDVNDH 65 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeCCHHH--H-HHHHHHHHh----------hCCCceEEEEEcCCCCH
Confidence 6789999999999999999999998 588888887521 1 111111110 00124678899999998
Q ss_pred CCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCceeC
Q psy17489 116 HLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAK----ECVNLKRFCEL 177 (177)
Q Consensus 116 ~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~v 177 (177)
+++..++ .++|++||+||.... .+.++..+++|+.++.++++.+. +. +..+||++
T Consensus 66 ------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~ 138 (248)
T PRK08251 66 ------DQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQ-GSGHLVLI 138 (248)
T ss_pred ------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEE
Confidence 4554443 368999999997432 34556788999999999888764 33 55677764
No 151
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.44 E-value=4.5e-12 Score=96.42 Aligned_cols=120 Identities=14% Similarity=0.132 Sum_probs=82.6
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
++|+++||||+|+||.++++.|++.| ++|++..++.. ....+.+.+... ...++..+.+|+.+
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G---~~vv~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~~D~~~ 64 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDG---FKVVAGCGPNS-PRRVKWLEDQKA-------------LGFDFIASEGNVGD 64 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcC---CEEEEEcCCCh-HHHHHHHHHHHh-------------cCCcEEEEEcCCCC
Confidence 57899999999999999999999999 56766543221 111122222111 12457788999999
Q ss_pred CCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489 115 EHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL 177 (177)
Q Consensus 115 ~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v 177 (177)
. +++..++ .++|++||+||... ..++++.++++|+.++..+.+.+.+. .+..+||++
T Consensus 65 ~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~i 138 (246)
T PRK12938 65 W------DSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINI 138 (246)
T ss_pred H------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 8 5555443 36899999999743 13567788999999988877765431 155677764
No 152
>PRK12743 oxidoreductase; Provisional
Probab=99.44 E-value=3.4e-12 Score=97.84 Aligned_cols=119 Identities=10% Similarity=0.060 Sum_probs=84.0
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+++++||||+|+||.++++.|++.| ++|+.+.++... .. +.+.+... ....++.++.+|++++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G---~~V~~~~~~~~~-~~-~~~~~~~~------------~~~~~~~~~~~Dl~~~ 64 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQG---FDIGITWHSDEE-GA-KETAEEVR------------SHGVRAEIRQLDLSDL 64 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCChH-HH-HHHHHHHH------------hcCCceEEEEccCCCH
Confidence 5799999999999999999999999 578777654321 11 12211111 0235688999999998
Q ss_pred CCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc----CCCCCceeC
Q psy17489 116 HLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC----VNLKRFCEL 177 (177)
Q Consensus 116 ~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~v 177 (177)
+++..++ .++|++||+||.... .+.++..+++|+.++..+++++... ++-.+||++
T Consensus 65 ------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~i 138 (256)
T PRK12743 65 ------PEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINI 138 (256)
T ss_pred ------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 5554443 368999999997431 3567788999999999999887653 112467764
No 153
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.44 E-value=2.8e-12 Score=98.36 Aligned_cols=108 Identities=12% Similarity=0.145 Sum_probs=80.9
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+++++++||||+|+||.++++.|++.| ++|++++|++.. .+.+.+... ..++.++.+|+
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g---~~V~~~~r~~~~---~~~~~~~~~--------------~~~~~~~~~D~ 67 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAG---ARVHVCDVSEAA---LAATAARLP--------------GAKVTATVADV 67 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHHh--------------cCceEEEEccC
Confidence 3678999999999999999999999999 589999986421 122221111 12568899999
Q ss_pred CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHH
Q psy17489 113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAK 166 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~ 166 (177)
.++ +.+..++ .++|+|||+||... ..+.+...+++|+.++..+++.+.
T Consensus 68 ~~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 130 (264)
T PRK12829 68 ADP------AQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAV 130 (264)
T ss_pred CCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 998 5555544 37899999999751 135677889999999999988764
No 154
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.44 E-value=4.3e-12 Score=96.91 Aligned_cols=119 Identities=17% Similarity=0.157 Sum_probs=84.0
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+.+++++||||+|+||.++++.|++.| .+|+.++|+... . +.+.+...+ ...++.++++|+.
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G---~~Vi~~~r~~~~--~-~~~~~~~~~------------~~~~~~~~~~D~~ 67 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQG---AHVIVSSRKLDG--C-QAVADAIVA------------AGGKAEALACHIG 67 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHh------------cCCeEEEEEcCCC
Confidence 567899999999999999999999999 589999886421 1 111111110 1245778899999
Q ss_pred CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCc
Q psy17489 114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRF 174 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~ 174 (177)
+. +++..++ .++|++||+||... ..+.++..+++|+.++..+++.+. +. +..++
T Consensus 68 ~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~i 140 (252)
T PRK07035 68 EM------EQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQ-GGGSI 140 (252)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCcEE
Confidence 87 4554443 36899999998532 235567789999999998887763 33 44566
Q ss_pred eeC
Q psy17489 175 CEL 177 (177)
Q Consensus 175 v~v 177 (177)
|++
T Consensus 141 v~~ 143 (252)
T PRK07035 141 VNV 143 (252)
T ss_pred EEE
Confidence 653
No 155
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.44 E-value=3.9e-12 Score=101.47 Aligned_cols=120 Identities=10% Similarity=0.138 Sum_probs=84.7
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+++++++||||+|+||.++++.|++.| ++|++++|++.. . +.+.+... ....++.++.+|+
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~G---~~Vvl~~R~~~~--l-~~~~~~l~------------~~g~~~~~v~~Dv 66 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARRG---AKVVLLARGEEG--L-EALAAEIR------------AAGGEALAVVADV 66 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHH--H-HHHHHHHH------------HcCCcEEEEEecC
Confidence 3568899999999999999999999999 588888886421 1 11111111 0234688899999
Q ss_pred CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCc
Q psy17489 113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAK----ECVNLKRF 174 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~ 174 (177)
+|. ++++.++ .++|++|||||.... .+.++..+++|+.+..++.+.+. +. +..+|
T Consensus 67 ~d~------~~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~-~~g~i 139 (334)
T PRK07109 67 ADA------EAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR-DRGAI 139 (334)
T ss_pred CCH------HHHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEE
Confidence 998 5565543 368999999996431 35667788999998877666543 33 44567
Q ss_pred eeC
Q psy17489 175 CEL 177 (177)
Q Consensus 175 v~v 177 (177)
|++
T Consensus 140 V~i 142 (334)
T PRK07109 140 IQV 142 (334)
T ss_pred EEe
Confidence 764
No 156
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.43 E-value=2.6e-12 Score=98.44 Aligned_cols=110 Identities=11% Similarity=0.135 Sum_probs=81.7
Q ss_pred cccCCCceEEEecCC--cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEE
Q psy17489 31 DDFYRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVI 108 (177)
Q Consensus 31 ~~~~~~~~vlVtG~~--G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 108 (177)
+.++++|+++||||+ ++||..+++.|++.| .+|++.+|+. +..+.+.+.. ..++.++
T Consensus 2 ~~~l~~k~~lItGas~~~gIG~a~a~~la~~G---~~Vi~~~r~~---~~~~~~~~~~---------------~~~~~~~ 60 (252)
T PRK06079 2 SGILSGKKIVVMGVANKRSIAWGCAQAIKDQG---ATVIYTYQND---RMKKSLQKLV---------------DEEDLLV 60 (252)
T ss_pred ccccCCCEEEEeCCCCCCchHHHHHHHHHHCC---CEEEEecCch---HHHHHHHhhc---------------cCceeEE
Confidence 345688999999999 799999999999999 5888888752 1222222210 1357789
Q ss_pred eCCCCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-----------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 109 PSNLESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-----------FDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 109 ~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-----------~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
++|++++ ++++.++ .++|++|||||... ..++|+..+++|+.++..+.+.+..
T Consensus 61 ~~Dl~~~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~ 131 (252)
T PRK06079 61 ECDVASD------ESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARP 131 (252)
T ss_pred eCCCCCH------HHHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHH
Confidence 9999998 5555443 46899999999642 1356778899999999999888765
No 157
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.43 E-value=3e-12 Score=97.35 Aligned_cols=119 Identities=13% Similarity=0.135 Sum_probs=84.3
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+|+++||||+|+||.++++.|++.| .+|++++|++.. ..+...+... ....++.++++|+.++
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G---~~Vi~~~r~~~~--~~~~~~~~~~------------~~~~~~~~~~~Dl~~~ 63 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAG---ARLYLAARDVER--LERLADDLRA------------RGAVAVSTHELDILDT 63 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcC---CEEEEEeCCHHH--HHHHHHHHHH------------hcCCeEEEEecCCCCh
Confidence 4789999999999999999999999 589999987521 1111111100 0124788999999998
Q ss_pred CCCCCHHHHHHHhc----CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489 116 HLGLSEDSEQLIKS----KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL 177 (177)
Q Consensus 116 ~~~~~~~~~~~~~~----~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v 177 (177)
+++..+++ .+|++||++|... ..+++.+.+++|+.++.++++.+... .+.++||++
T Consensus 64 ------~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ 133 (243)
T PRK07102 64 ------ASHAAFLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGI 133 (243)
T ss_pred ------HHHHHHHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 56655544 5799999998643 13445567899999999998887542 145667753
No 158
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.43 E-value=3.3e-12 Score=97.84 Aligned_cols=120 Identities=12% Similarity=0.121 Sum_probs=85.5
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+.+|+++||||+|+||.++++.|.+.| .+|++++|+... .+.+.....+ ...++.++.+|++
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G---~~vv~~~r~~~~---~~~~~~~l~~------------~~~~~~~~~~D~~ 70 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAG---ASVVVSDINADA---ANHVVDEIQQ------------LGGQAFACRCDIT 70 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeCCHHH---HHHHHHHHHh------------cCCcEEEEEccCC
Confidence 568999999999999999999999999 578888875421 1112111110 1246778899999
Q ss_pred CCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489 114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL 177 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v 177 (177)
+. +++..++ .++|++||+||.... .+.++..+++|+.++.++++++... .+..++|++
T Consensus 71 ~~------~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~i 144 (255)
T PRK06113 71 SE------QELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTI 144 (255)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEE
Confidence 98 5555543 368999999997431 3567778999999999999998631 133467653
No 159
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.43 E-value=2.8e-12 Score=98.06 Aligned_cols=108 Identities=17% Similarity=0.225 Sum_probs=80.1
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
||+++||||+|+||.++++.|++.| ++|++++|+... . +.+.+.... ...++.++.+|++++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G---~~Vi~~~r~~~~--~-~~~~~~~~~------------~~~~~~~~~~D~~~~ 62 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEG---ANVVITGRTKEK--L-EEAKLEIEQ------------FPGQVLTVQMDVRNP 62 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHh------------cCCcEEEEEecCCCH
Confidence 5799999999999999999999999 589998887421 1 122211110 124688899999987
Q ss_pred CCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 116 HLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 116 ~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+++..++ .++|++||+||... ..+.|+..+++|+.++.++++++.+
T Consensus 63 ------~~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 122 (252)
T PRK07677 63 ------EDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGK 122 (252)
T ss_pred ------HHHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHH
Confidence 5555543 36899999998532 1356778899999999999998843
No 160
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.43 E-value=3.9e-12 Score=95.97 Aligned_cols=107 Identities=18% Similarity=0.095 Sum_probs=81.5
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
.+|+++||||+|+||.++++.|++.| ++|++++|+.... ....++.+|+++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G---~~v~~~~r~~~~~--------------------------~~~~~~~~D~~~ 52 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLG---HQVIGIARSAIDD--------------------------FPGELFACDLAD 52 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCC---CEEEEEeCCcccc--------------------------cCceEEEeeCCC
Confidence 46899999999999999999999999 6899999875321 012467899999
Q ss_pred CCCCCCHHHHHHHhc------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCceeC
Q psy17489 115 EHLGLSEDSEQLIKS------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAK----ECVNLKRFCEL 177 (177)
Q Consensus 115 ~~~~~~~~~~~~~~~------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~v 177 (177)
. +++..+++ ++|++||+||.... .+.++..+++|+.++.++.+.+. +. +..+||++
T Consensus 53 ~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~ 125 (234)
T PRK07577 53 I------EQTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLR-EQGRIVNI 125 (234)
T ss_pred H------HHHHHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEE
Confidence 7 55555544 58999999997532 34566788999999888877654 34 55677764
No 161
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.43 E-value=4.4e-12 Score=97.11 Aligned_cols=114 Identities=17% Similarity=0.113 Sum_probs=81.7
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+++++++||||+|+||.++++.|++.| ++|++++|+.. ........ -...++.+|+
T Consensus 4 ~~~~~~vlItGasggIG~~~a~~l~~~G---~~v~~~~r~~~------~~~~~~~~--------------~~~~~~~~D~ 60 (255)
T PRK06057 4 RLAGRVAVITGGGSGIGLATARRLAAEG---ATVVVGDIDPE------AGKAAADE--------------VGGLFVPTDV 60 (255)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHcC---CEEEEEeCCHH------HHHHHHHH--------------cCCcEEEeeC
Confidence 3678999999999999999999999998 58888888642 12211110 0125788999
Q ss_pred CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc---------hHHHHHHHHHhHHHHHHHHHHHHh----cCCCC
Q psy17489 113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF---------DEALQKAIRANLYATKQMLNLAKE----CVNLK 172 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~---------~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~ 172 (177)
++. +++..+++ ++|++||+||.... .+.++..+++|+.++..+++.+.. . +..
T Consensus 61 ~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g 133 (255)
T PRK06057 61 TDE------DAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQ-GKG 133 (255)
T ss_pred CCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHh-CCc
Confidence 997 56655554 57999999986421 245777899999999888877643 3 334
Q ss_pred Ccee
Q psy17489 173 RFCE 176 (177)
Q Consensus 173 ~~v~ 176 (177)
++|+
T Consensus 134 ~iv~ 137 (255)
T PRK06057 134 SIIN 137 (255)
T ss_pred EEEE
Confidence 5654
No 162
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.43 E-value=3.6e-12 Score=96.66 Aligned_cols=117 Identities=14% Similarity=0.096 Sum_probs=83.8
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
++++||||+|+||.++++.|.+.| .+|++++|++. +.. +.+.... .....++.++.+|+.+.
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g---~~vi~~~r~~~-~~~-~~~~~~~------------~~~~~~~~~~~~D~~~~- 64 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDG---YRVIATYFSGN-DCA-KDWFEEY------------GFTEDQVRLKELDVTDT- 64 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcC---CEEEEEeCCcH-HHH-HHHHHHh------------hccCCeEEEEEcCCCCH-
Confidence 589999999999999999999998 58999988753 111 1111110 01224688999999997
Q ss_pred CCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCceeC
Q psy17489 117 LGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLA----KECVNLKRFCEL 177 (177)
Q Consensus 117 ~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~v 177 (177)
+.+..+++ ++|++||++|... ..+.++..+++|+.++.++.+.+ ++. +..+||++
T Consensus 65 -----~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~i 137 (245)
T PRK12824 65 -----EECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GYGRIINI 137 (245)
T ss_pred -----HHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEE
Confidence 55555443 5899999999643 24567788999999999986654 444 55678764
No 163
>PRK08264 short chain dehydrogenase; Validated
Probab=99.43 E-value=4.4e-12 Score=95.98 Aligned_cols=114 Identities=16% Similarity=0.255 Sum_probs=86.2
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+.+++++||||+|+||+++++.|++.|+ .+|++++|+.... .+ ...++.++.+|+.
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~G~--~~V~~~~r~~~~~------~~----------------~~~~~~~~~~D~~ 59 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLARGA--AKVYAAARDPESV------TD----------------LGPRVVPLQLDVT 59 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCc--ccEEEEecChhhh------hh----------------cCCceEEEEecCC
Confidence 4678999999999999999999999983 3888888875321 10 1146888999999
Q ss_pred CCCCCCCHHHHHHHhc---CCcEEEEcCcc-cC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489 114 SEHLGLSEDSEQLIKS---KVNIIFHCAAS-LR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL 177 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~---~~d~vi~~aa~-~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v 177 (177)
+. +++..+++ .+|+|||+||. .. ..+.+...+++|+.++.++++++.+. .+..+||++
T Consensus 60 ~~------~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~ 131 (238)
T PRK08264 60 DP------ASVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNV 131 (238)
T ss_pred CH------HHHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 98 67776665 58999999997 21 23567778999999999999986531 145567764
No 164
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.43 E-value=4.4e-12 Score=96.69 Aligned_cols=118 Identities=12% Similarity=0.210 Sum_probs=82.5
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+|+||+++++.|++.| ++|+...++.. +........ ...++.++.+|+.
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~G---~~vv~~~~~~~-----~~~~~~~~~------------~~~~~~~~~~D~~ 62 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFAREG---ARVVVNYHQSE-----DAAEALADE------------LGDRAIALQADVT 62 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCC---CeEEEEcCCCH-----HHHHHHHHH------------hCCceEEEEcCCC
Confidence 467899999999999999999999999 47776555321 112211110 1146788999999
Q ss_pred CCCCCCCHHHHHHHhc-------C-CcEEEEcCcccC-------------chHHHHHHHHHhHHHHHHHHHHHHhc---C
Q psy17489 114 SEHLGLSEDSEQLIKS-------K-VNIIFHCAASLR-------------FDEALQKAIRANLYATKQMLNLAKEC---V 169 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~-~d~vi~~aa~~~-------------~~~~~~~~~~~nv~~~~~ll~~~~~~---~ 169 (177)
++ +++..+++ . +|++||+|+... ..+.++..+++|+.++.++++.+... .
T Consensus 63 ~~------~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (253)
T PRK08642 63 DR------EQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQ 136 (253)
T ss_pred CH------HHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhc
Confidence 87 55555443 3 899999998521 13556778999999999999988631 1
Q ss_pred CCCCceeC
Q psy17489 170 NLKRFCEL 177 (177)
Q Consensus 170 ~~~~~v~v 177 (177)
+..++|++
T Consensus 137 ~~g~iv~i 144 (253)
T PRK08642 137 GFGRIINI 144 (253)
T ss_pred CCeEEEEE
Confidence 44567663
No 165
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.42 E-value=3.4e-12 Score=96.89 Aligned_cols=115 Identities=10% Similarity=0.170 Sum_probs=84.9
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+|+||.++++.|++.| ++|++++|+.. ...+.... .+..++.+|++
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g---~~V~~~~r~~~------~~~~~~~~--------------~~~~~~~~D~~ 63 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRG---ARVVAAARNAA------ALDRLAGE--------------TGCEPLRLDVG 63 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH--------------hCCeEEEecCC
Confidence 568899999999999999999999998 58999988642 22221110 13567889999
Q ss_pred CCCCCCCHHHHHHHhc---CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc----CCCCCceeC
Q psy17489 114 SEHLGLSEDSEQLIKS---KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC----VNLKRFCEL 177 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~---~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~v 177 (177)
+. +.+..+++ ++|++||+||.... .+++++.+++|+.++.++++++.+. +...+||++
T Consensus 64 ~~------~~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~ 135 (245)
T PRK07060 64 DD------AAIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNV 135 (245)
T ss_pred CH------HHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 87 56666654 58999999997532 3567778899999999999987653 113567764
No 166
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.42 E-value=3.1e-12 Score=97.01 Aligned_cols=120 Identities=16% Similarity=0.237 Sum_probs=85.4
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEE-EeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-VRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
+++++++||||+|+||.++++.|++.| ++|+.+ +|+... . +.+.+.... ...++.++.+|+
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g---~~v~~~~~r~~~~--~-~~~~~~~~~------------~~~~~~~~~~D~ 64 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEG---AKVVIAYDINEEA--A-QELLEEIKE------------EGGDAIAVKADV 64 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEcCCCHHH--H-HHHHHHHHh------------cCCeEEEEECCC
Confidence 467899999999999999999999998 577777 775421 1 111111110 124688899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489 113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFC 175 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v 175 (177)
+++ +++..+++ ++|+|||++|.... .+.++..+++|+.++.++++.+... .+.++||
T Consensus 65 ~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v 138 (247)
T PRK05565 65 SSE------EDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIV 138 (247)
T ss_pred CCH------HHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 998 55655543 78999999997531 3556778999999999998877542 1445677
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
++
T Consensus 139 ~~ 140 (247)
T PRK05565 139 NI 140 (247)
T ss_pred EE
Confidence 64
No 167
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.42 E-value=2.2e-12 Score=99.86 Aligned_cols=122 Identities=20% Similarity=0.270 Sum_probs=85.3
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+|+||.++++.|++.| ++|++++|+... ......+... .. ...++.++.+|+.
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G---~~V~~~~r~~~~--~~~~~~~l~~----------~~-~~~~~~~~~~Dl~ 68 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAG---AAVMIVGRNPDK--LAAAAEEIEA----------LK-GAGAVRYEPADVT 68 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEeCCHHH--HHHHHHHHHh----------cc-CCCceEEEEcCCC
Confidence 567999999999999999999999999 589988886421 1111111100 00 1246788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFC 175 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v 175 (177)
++ +++..+++ ++|++||+||... ..+.+...+++|+.++..+++.+.+. .+..+||
T Consensus 69 ~~------~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv 142 (276)
T PRK05875 69 DE------DQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFV 142 (276)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 97 55655544 6899999998532 13456778999999999998876543 1334666
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
++
T Consensus 143 ~~ 144 (276)
T PRK05875 143 GI 144 (276)
T ss_pred EE
Confidence 53
No 168
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.42 E-value=5e-12 Score=97.12 Aligned_cols=117 Identities=14% Similarity=0.241 Sum_probs=83.0
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+++++||||+|+||.++++.|++.| ++|++++|+... . +.+.+.+. ....++.++.+|+.+.
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g---~~Vi~~~r~~~~--~-~~~~~~l~------------~~~~~~~~~~~Dl~~~ 62 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAG---AQLVLAARNETR--L-ASLAQELA------------DHGGEALVVPTDVSDA 62 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHH------------hcCCcEEEEEccCCCH
Confidence 4689999999999999999999998 589999886421 1 11111111 0124688899999998
Q ss_pred CCCCCHHHHHHHhc-------CCcEEEEcCcccCc--------hHHHHHHHHHhHHHHHHHHHHHHhc--CCCCCcee
Q psy17489 116 HLGLSEDSEQLIKS-------KVNIIFHCAASLRF--------DEALQKAIRANLYATKQMLNLAKEC--VNLKRFCE 176 (177)
Q Consensus 116 ~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~--------~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~ 176 (177)
+.+..+++ ++|+|||+||.... .+.+.+.+++|+.++.++++.+... .+..++|+
T Consensus 63 ------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~ 134 (263)
T PRK06181 63 ------EACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVV 134 (263)
T ss_pred ------HHHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEE
Confidence 56655544 68999999997432 2335667999999999999988532 13356665
No 169
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.42 E-value=5.4e-12 Score=102.75 Aligned_cols=107 Identities=16% Similarity=0.250 Sum_probs=82.9
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+|+||.++++.|.+.| .+|++++|++. ++...... ...++..+.+|++
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G---~~Vi~l~r~~~------~l~~~~~~------------~~~~v~~v~~Dvs 234 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQG---AKVVALTSNSD------KITLEING------------EDLPVKTLHWQVG 234 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHhh------------cCCCeEEEEeeCC
Confidence 578999999999999999999999999 68888888642 11111110 1124667889999
Q ss_pred CCCCCCCHHHHHHHhcCCcEEEEcCcccC----chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 114 SEHLGLSEDSEQLIKSKVNIIFHCAASLR----FDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~----~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+. +.+...++++|++|||||... ..+++++.+++|+.++.++++.+.+
T Consensus 235 d~------~~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp 286 (406)
T PRK07424 235 QE------AALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFT 286 (406)
T ss_pred CH------HHHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98 778888899999999999743 2346778899999999999998754
No 170
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.42 E-value=6.7e-13 Score=104.37 Aligned_cols=106 Identities=20% Similarity=0.280 Sum_probs=69.0
Q ss_pred EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489 39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG 118 (177)
Q Consensus 39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 118 (177)
|+||||+||||++|++.|++.| ..++++.|+.... .... .+..+|+.|..
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g---~~~v~~~~~~~~~---~~~~----------------------~~~~~~~~d~~-- 51 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKG---ITDILVVDNLKDG---TKFV----------------------NLVDLDIADYM-- 51 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCC---CceEEEecCCCcc---hHHH----------------------hhhhhhhhhhh--
Confidence 7999999999999999999998 3555555543211 0000 11223443321
Q ss_pred CCHHH-HHHHh-----cCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 119 LSEDS-EQLIK-----SKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 119 ~~~~~-~~~~~-----~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
..+. +..++ .++|+|||+||..+. ..+...+++.|+.++.+++++|++. ++ +|||+
T Consensus 52 -~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~-~~i~~ 114 (308)
T PRK11150 52 -DKEDFLAQIMAGDDFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYA 114 (308)
T ss_pred -hHHHHHHHHhcccccCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHc-CC-cEEEE
Confidence 0022 23333 268999999986432 1233457899999999999999998 76 68874
No 171
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.42 E-value=5.1e-12 Score=97.24 Aligned_cols=123 Identities=14% Similarity=0.163 Sum_probs=84.9
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+++++++||||+|+||.++++.|++.| ++|++++|+... . +...+.... .. ...++.++.+|+
T Consensus 5 ~l~~k~~lItGas~giG~~ia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~~--------~~--~~~~~~~~~~D~ 68 (265)
T PRK07062 5 QLEGRVAVVTGGSSGIGLATVELLLEAG---ASVAICGRDEER--L-ASAEARLRE--------KF--PGARLLAARCDV 68 (265)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeCCHHH--H-HHHHHHHHh--------hC--CCceEEEEEecC
Confidence 3578999999999999999999999999 589999986522 1 111111110 00 113677889999
Q ss_pred CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489 113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFC 175 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v 175 (177)
++. +++..++ .++|++|||||.... .+.|...+++|+.+...+++.+... .+..++|
T Consensus 69 ~~~------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv 142 (265)
T PRK07062 69 LDE------ADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIV 142 (265)
T ss_pred CCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEE
Confidence 998 5554443 468999999997431 3467788999999988887765431 1345676
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
++
T Consensus 143 ~i 144 (265)
T PRK07062 143 CV 144 (265)
T ss_pred Ee
Confidence 64
No 172
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.42 E-value=2e-12 Score=101.66 Aligned_cols=107 Identities=25% Similarity=0.361 Sum_probs=77.0
Q ss_pred EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489 39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG 118 (177)
Q Consensus 39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 118 (177)
|+||||+||||+++++.|.+.|+ ..|++++|..... .+.+. ....+..|+.+.
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~--~~v~~~~~~~~~~----~~~~~------------------~~~~~~~d~~~~--- 53 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGI--TDILVVDNLRDGH----KFLNL------------------ADLVIADYIDKE--- 53 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCC--ceEEEEecCCCch----hhhhh------------------hheeeeccCcch---
Confidence 68999999999999999999984 3677777654321 11110 012455677765
Q ss_pred CCHHHHHHHh----cCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 119 LSEDSEQLIK----SKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 119 ~~~~~~~~~~----~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+.++.+. .++|+|||+|+.... ..++...+++|+.++.+++++|++. ++ +|||+
T Consensus 54 ---~~~~~~~~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~-~~v~~ 112 (314)
T TIGR02197 54 ---DFLDRLEKGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEK-GI-PFIYA 112 (314)
T ss_pred ---hHHHHHHhhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHh-CC-cEEEE
Confidence 4455544 479999999997543 2345667899999999999999998 66 78874
No 173
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.42 E-value=5.1e-12 Score=96.07 Aligned_cols=113 Identities=12% Similarity=0.097 Sum_probs=83.7
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+++++||||+|+||.++++.|++.| .+|++++|++ +++.+... ...++.++.+|+++.
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G---~~V~~~~r~~------~~~~~~~~-------------~~~~~~~~~~D~~~~ 58 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQG---WQVIACGRNQ------SVLDELHT-------------QSANIFTLAFDVTDH 58 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCC---CEEEEEECCH------HHHHHHHH-------------hcCCCeEEEeeCCCH
Confidence 3689999999999999999999999 5899998864 22222211 113578899999998
Q ss_pred CCCCCHHHHHHHhcC----CcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCcee
Q psy17489 116 HLGLSEDSEQLIKSK----VNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC-VNLKRFCE 176 (177)
Q Consensus 116 ~~~~~~~~~~~~~~~----~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~ 176 (177)
+++..+++. .|.+||+||... ..+.++..+++|+.++.++++.+... .+-.++|+
T Consensus 59 ------~~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~ 125 (240)
T PRK06101 59 ------PGTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVI 125 (240)
T ss_pred ------HHHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEE
Confidence 677777664 589999998532 13456788999999999999998753 12245654
No 174
>PRK09242 tropinone reductase; Provisional
Probab=99.41 E-value=7e-12 Score=96.06 Aligned_cols=121 Identities=13% Similarity=0.246 Sum_probs=86.2
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+|+||.++++.|.+.| .+|++++|+... . +++...... .. ...++.++.+|++
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~G---~~v~~~~r~~~~--~-~~~~~~l~~--------~~--~~~~~~~~~~Dl~ 70 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGLG---ADVLIVARDADA--L-AQARDELAE--------EF--PEREVHGLAADVS 70 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHcC---CEEEEEeCCHHH--H-HHHHHHHHh--------hC--CCCeEEEEECCCC
Confidence 578999999999999999999999999 588988886421 1 111111110 00 1246788999999
Q ss_pred CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh----cCCCCCce
Q psy17489 114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE----CVNLKRFC 175 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v 175 (177)
+. +++..++ .++|++||+||... ..++++..+++|+.++..+++++.+ . +..+||
T Consensus 71 ~~------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii 143 (257)
T PRK09242 71 DD------EDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH-ASSAIV 143 (257)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCceEE
Confidence 97 4444433 46899999999732 2456778899999999999888753 3 446777
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
++
T Consensus 144 ~~ 145 (257)
T PRK09242 144 NI 145 (257)
T ss_pred EE
Confidence 64
No 175
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.41 E-value=6.3e-12 Score=95.79 Aligned_cols=128 Identities=19% Similarity=0.172 Sum_probs=84.5
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN 111 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D 111 (177)
..+++|+++||||+|+||.++++.|++.| .+|++++|+... . +.+...+.+ ....++.++.+|
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G---~~Vi~~~r~~~~--~-~~~~~~l~~-----------~~~~~~~~~~~d 70 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHG---ATVILLGRTEEK--L-EAVYDEIEA-----------AGGPQPAIIPLD 70 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCC---CcEEEEeCCHHH--H-HHHHHHHHh-----------cCCCCceEEEec
Confidence 45689999999999999999999999998 588999987521 1 122111110 012356777888
Q ss_pred CCCCCCC---CCHHHHHHHhcCCcEEEEcCcccCc--------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCcee
Q psy17489 112 LESEHLG---LSEDSEQLIKSKVNIIFHCAASLRF--------DEALQKAIRANLYATKQMLNLAK----ECVNLKRFCE 176 (177)
Q Consensus 112 ~~~~~~~---~~~~~~~~~~~~~d~vi~~aa~~~~--------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~ 176 (177)
+.+.... ...+.+.+.+.++|+|||+|+.... .+.++..+++|+.++.++++.+. +. +.++||+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~-~~~~iv~ 149 (247)
T PRK08945 71 LLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKS-PAASLVF 149 (247)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CCCEEEE
Confidence 8642110 0001222223468999999986421 35677889999999999988764 34 5667776
Q ss_pred C
Q psy17489 177 L 177 (177)
Q Consensus 177 v 177 (177)
+
T Consensus 150 ~ 150 (247)
T PRK08945 150 T 150 (247)
T ss_pred E
Confidence 3
No 176
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.41 E-value=7.4e-12 Score=98.20 Aligned_cols=119 Identities=10% Similarity=0.124 Sum_probs=85.2
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+|+||.++++.|.+.| ++|++++|+.. .+.+.... .. ...++..+.+|++
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~------~l~~~~~~---------l~-~~~~~~~~~~Dv~ 67 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARG---AKLALVDLEEA------ELAALAAE---------LG-GDDRVLTVVADVT 67 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH---------hc-CCCcEEEEEecCC
Confidence 578999999999999999999999999 58999888642 22222111 00 1135666779999
Q ss_pred CCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc--CCCCCceeC
Q psy17489 114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC--VNLKRFCEL 177 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~v 177 (177)
+. +++..++ .++|++|||||.... .+.++..+++|+.++.++++.+... .+..+||++
T Consensus 68 d~------~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~i 141 (296)
T PRK05872 68 DL------AAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQV 141 (296)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 97 5555543 468999999997431 3567788999999999999887542 122456653
No 177
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.41 E-value=3.9e-12 Score=97.87 Aligned_cols=107 Identities=14% Similarity=0.264 Sum_probs=79.8
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+|+||.++++.|++.| ++|++++|+.. .+.++... ...++.++.+|+.
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~------~~~~l~~~------------~~~~~~~~~~D~~ 61 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEG---ARVAVLDKSAA------GLQELEAA------------HGDAVVGVEGDVR 61 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHhh------------cCCceEEEEeccC
Confidence 468999999999999999999999999 58888888642 22222110 1245788899999
Q ss_pred CCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------h-----HHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------D-----EALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~-----~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+. +++..++ .++|++|||||.... . +.|+..+++|+.++..+++++.+
T Consensus 62 ~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 128 (262)
T TIGR03325 62 SL------DDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALP 128 (262)
T ss_pred CH------HHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHH
Confidence 87 4444433 468999999986321 1 35778899999999999998865
No 178
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.41 E-value=5.3e-12 Score=97.09 Aligned_cols=109 Identities=20% Similarity=0.373 Sum_probs=81.2
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+|+||.++++.|+++| ++|++++|++. .+.+.... + ....++.++.+|+.
T Consensus 3 ~~~~~vlItG~s~~iG~~ia~~l~~~G---~~V~~~~r~~~------~~~~~~~~-----~-----~~~~~~~~~~~D~~ 63 (263)
T PRK09072 3 LKDKRVLLTGASGGIGQALAEALAAAG---ARLLLVGRNAE------KLEALAAR-----L-----PYPGRHRWVVADLT 63 (263)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEECCHH------HHHHHHHH-----H-----hcCCceEEEEccCC
Confidence 357899999999999999999999999 58999998642 22222111 0 01247889999999
Q ss_pred CCCCCCCHHHHHHHh------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 114 SEHLGLSEDSEQLIK------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+. +++..++ .++|++||+||.... .+.+...+++|+.++.++++.+.+
T Consensus 64 d~------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~ 124 (263)
T PRK09072 64 SE------AGREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLP 124 (263)
T ss_pred CH------HHHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 98 4555443 468999999997532 345667889999999999988754
No 179
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.41 E-value=4.7e-12 Score=96.53 Aligned_cols=111 Identities=10% Similarity=0.112 Sum_probs=85.0
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+|+||+++++.|++.| .+|++++|+. ... ...++.++++|+.
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G---~~v~~~~~~~--------~~~----------------~~~~~~~~~~D~~ 58 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAG---AKVIGFDQAF--------LTQ----------------EDYPFATFVLDVS 58 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEecch--------hhh----------------cCCceEEEEecCC
Confidence 567999999999999999999999999 5888888864 000 1246788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE 176 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~ 176 (177)
+. +.+..+++ ++|++||+++.... .+.+...+++|+.++..+++.+... .+..+||+
T Consensus 59 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~ 132 (252)
T PRK08220 59 DA------AAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVT 132 (252)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 98 56666544 48999999997532 3567778999999999999887532 13446765
Q ss_pred C
Q psy17489 177 L 177 (177)
Q Consensus 177 v 177 (177)
+
T Consensus 133 ~ 133 (252)
T PRK08220 133 V 133 (252)
T ss_pred E
Confidence 3
No 180
>KOG1429|consensus
Probab=99.41 E-value=2.1e-13 Score=103.83 Aligned_cols=111 Identities=28% Similarity=0.439 Sum_probs=84.1
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
..+++|+||||+||||+||+.+|+..| +.|++++...+... +.+.... ..++++.+.-|+.
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~eg---h~VIa~Dn~ftg~k--~n~~~~~--------------~~~~fel~~hdv~ 85 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTEG---HEVIALDNYFTGRK--ENLEHWI--------------GHPNFELIRHDVV 85 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhcC---CeEEEEecccccch--hhcchhc--------------cCcceeEEEeech
Confidence 456899999999999999999999999 69999887543321 1112111 1356777777776
Q ss_pred CCCCCCCHHHHHHHhcCCcEEEEcCcccC---chHHHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489 114 SEHLGLSEDSEQLIKSKVNIIFHCAASLR---FDEALQKAIRANLYATKQMLNLAKECVNLKRFCE 176 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~---~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~ 176 (177)
.+ ++..+|.|+|+|++.+ +.......+.+|+.++.+.+.+|++. + +||++
T Consensus 86 ~p-----------l~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv-~-aR~l~ 138 (350)
T KOG1429|consen 86 EP-----------LLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV-G-ARFLL 138 (350)
T ss_pred hH-----------HHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHh-C-ceEEE
Confidence 54 5678899999999865 34555667899999999999999997 5 67765
No 181
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.40 E-value=5.9e-12 Score=97.08 Aligned_cols=110 Identities=12% Similarity=0.157 Sum_probs=80.7
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+.+++++||||+|+||.++++.|++.| ++|++++|+... . +...+... ....++.++.+|++
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~------------~~~~~~~~~~~Dv~ 68 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAG---ANVAVASRSQEK--V-DAAVAQLQ------------QAGPEGLGVSADVR 68 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHH------------HhCCceEEEECCCC
Confidence 578999999999999999999999999 689999987521 1 11111111 01245678899999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+. +++..+++ ++|++||+||... ..+.+...+++|+.++.++++.+..
T Consensus 69 ~~------~~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~ 130 (264)
T PRK07576 69 DY------AAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYP 130 (264)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 87 55655543 5799999997532 2356777899999999999988764
No 182
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.40 E-value=8.2e-12 Score=97.50 Aligned_cols=116 Identities=13% Similarity=0.121 Sum_probs=81.0
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCC---CChHHHHHHHHhhhhhhcccccCcccCCCeEEEe
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG---SSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP 109 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 109 (177)
.+++|+++||||+++||.++++.|++.| .+|++.+|+... ....+.+...... + .....++.++.
T Consensus 3 ~l~~k~~lITGas~GIG~aia~~la~~G---~~vii~~~~~~~~~~~~~~~~~~~~~~~-----l----~~~~~~~~~~~ 70 (286)
T PRK07791 3 LLDGRVVIVTGAGGGIGRAHALAFAAEG---ARVVVNDIGVGLDGSASGGSAAQAVVDE-----I----VAAGGEAVANG 70 (286)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEeeCCccccccccchhHHHHHHHH-----H----HhcCCceEEEe
Confidence 3678999999999999999999999999 578887765310 0000111111110 0 00124677889
Q ss_pred CCCCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH
Q psy17489 110 SNLESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK 166 (177)
Q Consensus 110 ~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~ 166 (177)
+|+++. +++..++ .++|++|||||... ..+.|+..+++|+.++..+.+.+.
T Consensus 71 ~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 135 (286)
T PRK07791 71 DDIADW------DGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAA 135 (286)
T ss_pred CCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHH
Confidence 999998 4554443 46899999999743 136788899999999999988764
No 183
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.40 E-value=8.6e-12 Score=95.51 Aligned_cols=108 Identities=14% Similarity=0.142 Sum_probs=80.7
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+.+|+++||||+|+||.++++.|++.| ++|+..++... .+...+... ...++.++++|++
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G---~~vv~~~~~~~----~~~~~~~~~-------------~~~~~~~~~~Dl~ 67 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAG---CDIVGINIVEP----TETIEQVTA-------------LGRRFLSLTADLR 67 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEecCcch----HHHHHHHHh-------------cCCeEEEEECCCC
Confidence 678999999999999999999999999 57777766432 122222111 1245778999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+. +++..+++ ++|++|||||.... .+.++..+++|+.++.++++.+..
T Consensus 68 ~~------~~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 129 (253)
T PRK08993 68 KI------DGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAK 129 (253)
T ss_pred CH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 87 55555543 68999999997431 356888999999999999888754
No 184
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.40 E-value=4.1e-12 Score=100.08 Aligned_cols=114 Identities=23% Similarity=0.363 Sum_probs=84.1
Q ss_pred eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCC
Q psy17489 38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHL 117 (177)
Q Consensus 38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 117 (177)
+|+||||+|+||.++++.|++.| .+|++++|...... ..+... . ...++.++.+|+.+.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g---~~V~~~~~~~~~~~--~~~~~~-------------~-~~~~~~~~~~D~~~~-- 59 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESG---HEVVVLDNLSNGSP--EALKRG-------------E-RITRVTFVEGDLRDR-- 59 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCC---CeEEEEeCCCccch--hhhhhh-------------c-cccceEEEECCCCCH--
Confidence 58999999999999999999998 47777665332110 111110 0 012577889999998
Q ss_pred CCCHHHHHHHhc--CCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 118 GLSEDSEQLIKS--KVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 118 ~~~~~~~~~~~~--~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+.+..+++ ++|+|||+||..... ....+.++.|+.++.+++++|.+. ++++|||+
T Consensus 60 ----~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~ 119 (328)
T TIGR01179 60 ----ELLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-GVKKFIFS 119 (328)
T ss_pred ----HHHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc-CCCEEEEe
Confidence 67877775 699999999975432 234457899999999999999988 78888874
No 185
>PRK12742 oxidoreductase; Provisional
Probab=99.40 E-value=9.5e-12 Score=94.03 Aligned_cols=116 Identities=12% Similarity=0.205 Sum_probs=81.1
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+|+||+++++.|++.| .+|++..++.. +...++..+ ..+.++.+|++
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G---~~v~~~~~~~~-----~~~~~l~~~--------------~~~~~~~~D~~ 61 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDG---ANVRFTYAGSK-----DAAERLAQE--------------TGATAVQTDSA 61 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEecCCCH-----HHHHHHHHH--------------hCCeEEecCCC
Confidence 568999999999999999999999998 57777665431 122221111 13567789998
Q ss_pred CCCCCCCHHHHHHHh---cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCceeC
Q psy17489 114 SEHLGLSEDSEQLIK---SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC-VNLKRFCEL 177 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~---~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~v 177 (177)
+. +.+...+ .++|++||+||.... .++++..+++|+.++..+++.+... ....++|++
T Consensus 62 ~~------~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~i 130 (237)
T PRK12742 62 DR------DAVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIII 130 (237)
T ss_pred CH------HHHHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 87 4555544 358999999997431 3567889999999999997666542 123466653
No 186
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.40 E-value=8.7e-12 Score=89.34 Aligned_cols=119 Identities=15% Similarity=0.236 Sum_probs=84.6
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHH-HHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEER-VKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
++++||||+|+||.++++.|.+.|. ..|++..|++........ +..... ...++.++.+|+.++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~--~~v~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~D~~~~ 65 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGA--RHLVLLSRSGPDAPGAAELLAELEA-------------LGAEVTVVACDVADR 65 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhC--CeEEEEeCCCCCCccHHHHHHHHHh-------------cCCeEEEEECCCCCH
Confidence 4789999999999999999999884 467777876543221111 111111 124677889999987
Q ss_pred CCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 116 HLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 116 ~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+.+..++ ..+|.+||+++.... .+.++.++++|+.++.++++.+.+. +.+++|++
T Consensus 66 ------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~ii~~ 134 (180)
T smart00822 66 ------AALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL-PLDFFVLF 134 (180)
T ss_pred ------HHHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC-CcceEEEE
Confidence 4555543 347999999996432 2556778999999999999999776 66777753
No 187
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.40 E-value=1.1e-11 Score=97.63 Aligned_cols=112 Identities=14% Similarity=0.108 Sum_probs=82.2
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN 111 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D 111 (177)
..+++|+++||||+|+||.++++.|++.| .+|++.++.... .. +.+.+.+.. ...++.++.+|
T Consensus 8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~G---a~Vv~~~~~~~~-~~-~~~~~~i~~------------~g~~~~~~~~D 70 (306)
T PRK07792 8 TDLSGKVAVVTGAAAGLGRAEALGLARLG---ATVVVNDVASAL-DA-SDVLDEIRA------------AGAKAVAVAGD 70 (306)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEecCCchh-HH-HHHHHHHHh------------cCCeEEEEeCC
Confidence 34678999999999999999999999999 588887775321 11 112111110 12468889999
Q ss_pred CCCCCCCCCHHHHHHHh------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHH
Q psy17489 112 LESEHLGLSEDSEQLIK------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAK 166 (177)
Q Consensus 112 ~~~~~~~~~~~~~~~~~------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~ 166 (177)
+++. +.+..++ .++|++|||||.... .++++..+++|+.++.++++.+.
T Consensus 71 v~d~------~~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~ 132 (306)
T PRK07792 71 ISQR------ATADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAA 132 (306)
T ss_pred CCCH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence 9997 4555443 468999999997532 35677889999999999998764
No 188
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.39 E-value=6.1e-12 Score=96.55 Aligned_cols=122 Identities=16% Similarity=0.171 Sum_probs=81.7
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
..+++++||||+|+||.+++++|++.|. .+|++.+|++.. ..++...+.... ...++.++++|++
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~gg--~~V~~~~r~~~~-~~~~~~~~l~~~------------~~~~v~~~~~D~~ 70 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNAP--ARVVLAALPDDP-RRDAAVAQMKAA------------GASSVEVIDFDAL 70 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcCC--CeEEEEeCCcch-hHHHHHHHHHhc------------CCCceEEEEecCC
Confidence 3578999999999999999999999852 589999887632 111112211110 1136889999999
Q ss_pred CCCCCCCHHHHHHH----h--cCCcEEEEcCcccCch-------HHHHHHHHHhHHHHHHH----HHHHHhcCCCCCcee
Q psy17489 114 SEHLGLSEDSEQLI----K--SKVNIIFHCAASLRFD-------EALQKAIRANLYATKQM----LNLAKECVNLKRFCE 176 (177)
Q Consensus 114 ~~~~~~~~~~~~~~----~--~~~d~vi~~aa~~~~~-------~~~~~~~~~nv~~~~~l----l~~~~~~~~~~~~v~ 176 (177)
+. +++..+ . .++|++||++|..... ....+.+++|+.++..+ ++.+++. +..+||+
T Consensus 71 ~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-~~~~iv~ 143 (253)
T PRK07904 71 DT------DSHPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-GFGQIIA 143 (253)
T ss_pred Ch------HHHHHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-CCceEEE
Confidence 87 443332 2 3799999999875321 11224689999988875 4555555 5678876
Q ss_pred C
Q psy17489 177 L 177 (177)
Q Consensus 177 v 177 (177)
+
T Consensus 144 i 144 (253)
T PRK07904 144 M 144 (253)
T ss_pred E
Confidence 4
No 189
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.39 E-value=6.1e-12 Score=96.31 Aligned_cols=115 Identities=17% Similarity=0.182 Sum_probs=82.8
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+++++||||+|+||.+++..|++.| .+|++++|+.. ........ + ...++.++.+|+.+.
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g---~~v~~~~r~~~------~~~~~~~~-----~------~~~~~~~~~~D~~~~ 61 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAG---DRVLALDIDAA------ALAAFADA-----L------GDARFVPVACDLTDA 61 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH-----h------cCCceEEEEecCCCH
Confidence 5789999999999999999999998 58999988642 11111110 0 113678899999998
Q ss_pred CCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh----cCCCCCceeC
Q psy17489 116 HLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE----CVNLKRFCEL 177 (177)
Q Consensus 116 ~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~v 177 (177)
+.+..+++ ++|++||++|.... .+.+...+.+|+.++.++++.+.. . +..+||++
T Consensus 62 ------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~ 134 (257)
T PRK07074 62 ------ASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKR-SRGAVVNI 134 (257)
T ss_pred ------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEE
Confidence 56655543 58999999997532 244556788999999999888743 3 44567663
No 190
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.39 E-value=4.2e-12 Score=97.68 Aligned_cols=107 Identities=17% Similarity=0.267 Sum_probs=79.3
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+|+||.++++.|++.| ++|++++|++. .+...... ...++.++++|++
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G---~~V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~D~~ 62 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEG---ARVAVLERSAE------KLASLRQR------------FGDHVLVVEGDVT 62 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH------------hCCcceEEEccCC
Confidence 568999999999999999999999999 58888888642 22222111 1135778999999
Q ss_pred CCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc--------hH----HHHHHHHHhHHHHHHHHHHHHh
Q psy17489 114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF--------DE----ALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~--------~~----~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+. +++..++ .++|++||+||.... .+ .|+..+++|+.++..+++.+..
T Consensus 63 ~~------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 129 (263)
T PRK06200 63 SY------ADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALP 129 (263)
T ss_pred CH------HHHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHH
Confidence 97 4555443 368999999996421 11 2667789999999999888764
No 191
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.39 E-value=1.3e-11 Score=94.64 Aligned_cols=114 Identities=11% Similarity=0.148 Sum_probs=80.7
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC-CCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK-GSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN 111 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D 111 (177)
.+++|+++||||+|+||.++++.|++.| .+|+++.++.. .....+.+.+.+.. ...++.++++|
T Consensus 5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G---~~vv~i~~~~~~~~~~~~~~~~~l~~------------~~~~~~~~~~D 69 (257)
T PRK12744 5 SLKGKVVLIAGGAKNLGGLIARDLAAQG---AKAVAIHYNSAASKADAEETVAAVKA------------AGAKAVAFQAD 69 (257)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCC---CcEEEEecCCccchHHHHHHHHHHHH------------hCCcEEEEecC
Confidence 3568999999999999999999999998 46666655432 11111222211110 12467889999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 112 LESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+++. +++..+++ ++|++||+||... ..+.++..+++|+.++..+++.+.+
T Consensus 70 ~~~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~ 133 (257)
T PRK12744 70 LTTA------AAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGR 133 (257)
T ss_pred cCCH------HHHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 9998 56665543 6899999999732 1356778899999999999998865
No 192
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.38 E-value=1.5e-11 Score=93.13 Aligned_cols=117 Identities=17% Similarity=0.215 Sum_probs=80.9
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+++||||+|+||.++++.|++.| ++|+++.|+.. ....+...+. . ....++.++.+|+.++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G---~~v~~~~r~~~-~~~~~~~~~~-~------------~~~~~~~~~~~D~~~~- 62 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDG---YRVAANCGPNE-ERAEAWLQEQ-G------------ALGFDFRVVEGDVSSF- 62 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCCH-HHHHHHHHHH-H------------hhCCceEEEEecCCCH-
Confidence 579999999999999999999999 57888877321 1111111111 0 0124688999999997
Q ss_pred CCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCceeC
Q psy17489 117 LGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLA----KECVNLKRFCEL 177 (177)
Q Consensus 117 ~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~v 177 (177)
+.+..++ ..+|+|||+||... ..+++...+++|+.++..+++.+ ++. +.++||++
T Consensus 63 -----~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~i 135 (242)
T TIGR01829 63 -----ESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-GWGRIINI 135 (242)
T ss_pred -----HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEE
Confidence 4554443 35899999998643 13566778899999988866554 444 55677764
No 193
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.38 E-value=1.2e-11 Score=93.44 Aligned_cols=112 Identities=15% Similarity=0.144 Sum_probs=83.8
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++||||+|+||.++++.|++.| ++|++++|+.... ...++.++.+|+.
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G---~~v~~~~r~~~~~------------------------~~~~~~~~~~D~~ 55 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQG---AQVYGVDKQDKPD------------------------LSGNFHFLQLDLS 55 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCC---CEEEEEeCCcccc------------------------cCCcEEEEECChH
Confidence 567899999999999999999999998 5888888864321 1145778899998
Q ss_pred CCCCCCCHHHHHHHhcCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489 114 SEHLGLSEDSEQLIKSKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL 177 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v 177 (177)
++ .+.+.+.+.++|++||+||... ..++++..+++|+.++.++++.+... .+..+||++
T Consensus 56 ~~-----~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ 125 (235)
T PRK06550 56 DD-----LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINM 125 (235)
T ss_pred HH-----HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 75 1344444568999999999531 13567788999999999999887542 133467663
No 194
>PRK06484 short chain dehydrogenase; Validated
Probab=99.38 E-value=1.3e-11 Score=103.59 Aligned_cols=118 Identities=14% Similarity=0.196 Sum_probs=86.8
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
...+|+++||||+|+||.++++.|++.| ++|++++|+. +.++++... ...++..+.+|+
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G---~~V~~~~r~~------~~~~~~~~~------------~~~~~~~~~~D~ 324 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAG---DRLLIIDRDA------EGAKKLAEA------------LGDEHLSVQADI 324 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHH------------hCCceeEEEccC
Confidence 4578999999999999999999999999 5899998864 222222111 113567789999
Q ss_pred CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCcee
Q psy17489 113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC-VNLKRFCE 176 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~ 176 (177)
+++ +++..++ .++|++|||||... ..+.|+..+++|+.++.++.+.+... .+..+||+
T Consensus 325 ~~~------~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~ 398 (520)
T PRK06484 325 TDE------AAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVN 398 (520)
T ss_pred CCH------HHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEE
Confidence 998 5555544 35899999999742 13567788999999999999987653 12346665
Q ss_pred C
Q psy17489 177 L 177 (177)
Q Consensus 177 v 177 (177)
+
T Consensus 399 i 399 (520)
T PRK06484 399 L 399 (520)
T ss_pred E
Confidence 3
No 195
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.38 E-value=1.1e-11 Score=94.38 Aligned_cols=121 Identities=11% Similarity=0.114 Sum_probs=82.0
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+|+||++++++|++.| ++|++..|+.. ....+.+..... ...++.++.+|++
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~g---~~v~~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~~D~~ 66 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKEG---SLVVVNAKKRA-EEMNETLKMVKE-------------NGGEGIGVLADVS 66 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCCh-HHHHHHHHHHHH-------------cCCeeEEEEeccC
Confidence 357899999999999999999999998 46766665432 111111111111 1235678889999
Q ss_pred CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCceeC
Q psy17489 114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC-VNLKRFCEL 177 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~v 177 (177)
++ +++..++ .++|+|||+||... ..+.++..+++|+.+..++++.+.+. ...++||++
T Consensus 67 ~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ 139 (252)
T PRK06077 67 TR------EGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNI 139 (252)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEE
Confidence 98 4554443 36899999999632 13345678899999999999988753 122466653
No 196
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.38 E-value=1.4e-11 Score=94.76 Aligned_cols=123 Identities=15% Similarity=0.159 Sum_probs=81.7
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+++|+++||||+++||.++++.|++.| .+|++..|+.. ... +.+.+.... ....++.++.+|+
T Consensus 5 ~l~~k~vlItGas~gIG~~ia~~l~~~G---~~v~~~~~~~~-~~~-~~~~~~~~~-----------~~~~~~~~~~~D~ 68 (260)
T PRK08416 5 EMKGKTLVISGGTRGIGKAIVYEFAQSG---VNIAFTYNSNV-EEA-NKIAEDLEQ-----------KYGIKAKAYPLNI 68 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCH-HHH-HHHHHHHHH-----------hcCCceEEEEcCC
Confidence 4678999999999999999999999999 57777665431 111 111111110 0124688999999
Q ss_pred CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------------chHHHHHHHHHhHHHHHHHHHHHHhc---C
Q psy17489 113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------------FDEALQKAIRANLYATKQMLNLAKEC---V 169 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------------~~~~~~~~~~~nv~~~~~ll~~~~~~---~ 169 (177)
+++ +++..++ .++|++|||||... ..+.+...+++|+.+...+.+.+... .
T Consensus 69 ~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 142 (260)
T PRK08416 69 LEP------ETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKV 142 (260)
T ss_pred CCH------HHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhcc
Confidence 997 5555543 36899999997531 12456678899999888776665432 1
Q ss_pred CCCCceeC
Q psy17489 170 NLKRFCEL 177 (177)
Q Consensus 170 ~~~~~v~v 177 (177)
+..++|++
T Consensus 143 ~~g~iv~i 150 (260)
T PRK08416 143 GGGSIISL 150 (260)
T ss_pred CCEEEEEE
Confidence 33467663
No 197
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.38 E-value=8.1e-12 Score=97.05 Aligned_cols=118 Identities=12% Similarity=0.124 Sum_probs=82.9
Q ss_pred CCCceEEEecCC--cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489 34 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN 111 (177)
Q Consensus 34 ~~~~~vlVtG~~--G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D 111 (177)
+++|+++||||+ ++||.++++.|++.| ++|++.+|+.. ..+.+.....+ . ... .++++|
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G---~~Vil~~r~~~---~~~~~~~~~~~---------~---~~~-~~~~~D 63 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQG---AELAFTYLNEA---LKKRVEPIAQE---------L---GSD-YVYELD 63 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCC---CEEEEEecCHH---HHHHHHHHHHh---------c---CCc-eEEEec
Confidence 468999999997 799999999999999 58888887632 12233322211 0 122 568899
Q ss_pred CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-----------chHHHHHHHHHhHHHHHHHHHHHHhc-CCCC
Q psy17489 112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-----------FDEALQKAIRANLYATKQMLNLAKEC-VNLK 172 (177)
Q Consensus 112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-----------~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~ 172 (177)
+++. +++..++ .++|++|||||... ..+.|+..+++|+.++..+.+.+... ..-.
T Consensus 64 v~d~------~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g 137 (274)
T PRK08415 64 VSKP------EHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGA 137 (274)
T ss_pred CCCH------HHHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCC
Confidence 9998 5555543 36899999999642 13567889999999999998887652 1123
Q ss_pred Ccee
Q psy17489 173 RFCE 176 (177)
Q Consensus 173 ~~v~ 176 (177)
++|+
T Consensus 138 ~Iv~ 141 (274)
T PRK08415 138 SVLT 141 (274)
T ss_pred cEEE
Confidence 5654
No 198
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.38 E-value=2.5e-11 Score=93.29 Aligned_cols=121 Identities=13% Similarity=0.117 Sum_probs=81.6
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+++|+++||||+|+||.++++.|++.| +.|++..|+... .. ....+.... ...++.++.+|+
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G---~~vvi~~~~~~~-~~-~~~~~~l~~------------~~~~~~~~~~Dl 66 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEK---AKVVINYRSDEE-EA-NDVAEEIKK------------AGGEAIAVKGDV 66 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCCHH-HH-HHHHHHHHH------------cCCeEEEEEecC
Confidence 3678999999999999999999999998 577777774321 11 111111110 124577899999
Q ss_pred CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCc
Q psy17489 113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLA----KECVNLKRF 174 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~ 174 (177)
++. +++..++ .++|++||+||.... .+.++..+++|+.++..+++.+ .+.+.-.++
T Consensus 67 ~~~------~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~i 140 (261)
T PRK08936 67 TVE------SDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNI 140 (261)
T ss_pred CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEE
Confidence 998 5555543 368999999997432 2567778999999887765544 433122456
Q ss_pred ee
Q psy17489 175 CE 176 (177)
Q Consensus 175 v~ 176 (177)
|+
T Consensus 141 v~ 142 (261)
T PRK08936 141 IN 142 (261)
T ss_pred EE
Confidence 65
No 199
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.38 E-value=1.2e-11 Score=94.09 Aligned_cols=109 Identities=11% Similarity=0.090 Sum_probs=76.9
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+++++||||+|+||++++++|++.| ++|+...++.. . ....+...+.. ...++.++.+|+++.
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G---~~vv~~~~~~~-~-~~~~~~~~l~~------------~~~~~~~~~~Dl~~~ 64 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERG---YAVCLNYLRNR-D-AAEAVVQAIRR------------QGGEALAVAADVADE 64 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC---CeEEEecCCCH-H-HHHHHHHHHHh------------CCCcEEEEEeccCCH
Confidence 4689999999999999999999998 46666554321 1 11111111110 124577899999997
Q ss_pred CCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 116 HLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 116 ~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+++..+++ ++|++||+||... ..++++..+++|+.++.++++.+.+
T Consensus 65 ------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 125 (248)
T PRK06123 65 ------ADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVK 125 (248)
T ss_pred ------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 55655544 6899999999753 1345667899999999999888754
No 200
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.38 E-value=3.7e-12 Score=96.81 Aligned_cols=113 Identities=15% Similarity=0.192 Sum_probs=81.1
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+++++||||+|+||.++++.|++.| .+|++++|+.... ... ....++.++.+|+.+.
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G---~~v~~~~r~~~~~-----~~~---------------~~~~~~~~~~~D~~~~ 57 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPG---IAVLGVARSRHPS-----LAA---------------AAGERLAEVELDLSDA 57 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCC---CEEEEEecCcchh-----hhh---------------ccCCeEEEEEeccCCH
Confidence 3589999999999999999999999 5888888875321 110 0124688899999998
Q ss_pred CCCCCHHHHHHHh-----------cCCcEEEEcCcccCc--------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCC
Q psy17489 116 HLGLSEDSEQLIK-----------SKVNIIFHCAASLRF--------DEALQKAIRANLYATKQMLNLAKEC---VNLKR 173 (177)
Q Consensus 116 ~~~~~~~~~~~~~-----------~~~d~vi~~aa~~~~--------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~ 173 (177)
+++..++ ..+|++|||||.... .+.++..+++|+.++..+.+.+.+. .+.++
T Consensus 58 ------~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 131 (243)
T PRK07023 58 ------AAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERR 131 (243)
T ss_pred ------HHHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCE
Confidence 4555522 147899999997532 3556778899999988877666542 14457
Q ss_pred ceeC
Q psy17489 174 FCEL 177 (177)
Q Consensus 174 ~v~v 177 (177)
+|++
T Consensus 132 iv~i 135 (243)
T PRK07023 132 ILHI 135 (243)
T ss_pred EEEE
Confidence 7764
No 201
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.37 E-value=1.4e-11 Score=92.31 Aligned_cols=111 Identities=13% Similarity=0.222 Sum_probs=79.5
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+|+++||||+|+||.++++.|++. + +|++++|+.. ...+... ....+.++.+|+.+.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~---~V~~~~r~~~------~~~~~~~-------------~~~~~~~~~~D~~~~ 59 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-H---TLLLGGRPAE------RLDELAA-------------ELPGATPFPVDLTDP 59 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-C---CEEEEeCCHH------HHHHHHH-------------HhccceEEecCCCCH
Confidence 579999999999999999999987 4 7899998642 1111111 013577899999998
Q ss_pred CCCCCHHHHHHHhc---CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCceeC
Q psy17489 116 HLGLSEDSEQLIKS---KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLA----KECVNLKRFCEL 177 (177)
Q Consensus 116 ~~~~~~~~~~~~~~---~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~v 177 (177)
+.+..+++ ++|+|||++|.... .+.+.+.+++|+.+...+.+.+ ++. .+++|++
T Consensus 60 ------~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~v~~ 127 (227)
T PRK08219 60 ------EAIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA--HGHVVFI 127 (227)
T ss_pred ------HHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCeEEEE
Confidence 67777775 58999999997432 2456777899999866655543 333 3567663
No 202
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.37 E-value=1.3e-11 Score=94.59 Aligned_cols=120 Identities=13% Similarity=0.105 Sum_probs=83.0
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+++++||||+|+||.++++.|++.| ++|++++|+... . +.+.+.... . ....++.++.+|+++.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g---~~vi~~~r~~~~--~-~~~~~~~~~----~------~~~~~~~~~~~D~~~~ 65 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEG---YRVAVADINSEK--A-ANVAQEINA----E------YGEGMAYGFGADATSE 65 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCHHH--H-HHHHHHHHH----h------cCCceeEEEEccCCCH
Confidence 5789999999999999999999998 588888886421 1 111111110 0 0013578899999987
Q ss_pred CCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CC-CCCceeC
Q psy17489 116 HLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VN-LKRFCEL 177 (177)
Q Consensus 116 ~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~-~~~~v~v 177 (177)
+++..++ .++|++||+||... ..++++..+++|+.++.++++.+.+. .+ ..++|++
T Consensus 66 ------~~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ 139 (259)
T PRK12384 66 ------QSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQI 139 (259)
T ss_pred ------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEe
Confidence 4554443 36899999998643 23567788999999999888876542 13 2466653
No 203
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.37 E-value=1.4e-11 Score=94.82 Aligned_cols=121 Identities=17% Similarity=0.208 Sum_probs=83.8
Q ss_pred CCCceEEEecCC--cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489 34 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN 111 (177)
Q Consensus 34 ~~~~~vlVtG~~--G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D 111 (177)
+.+|+++||||+ ++||.++++.|++.| ++|++..|+....+.++.+.+... ...++.++++|
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G---~~v~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~D 67 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAG---AELGITYLPDEKGRFEKKVRELTE-------------PLNPSLFLPCD 67 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCC---CEEEEEecCcccchHHHHHHHHHh-------------ccCcceEeecC
Confidence 468999999986 799999999999999 578777665432222233333211 11346678999
Q ss_pred CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------c----hHHHHHHHHHhHHHHHHHHHHHHhc-CCCC
Q psy17489 112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------F----DEALQKAIRANLYATKQMLNLAKEC-VNLK 172 (177)
Q Consensus 112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~----~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~ 172 (177)
+++. +++..++ .++|++|||||... . .+.|+..+++|+.++..+.+.+... ..-.
T Consensus 68 l~d~------~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g 141 (258)
T PRK07370 68 VQDD------AQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGG 141 (258)
T ss_pred cCCH------HHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCC
Confidence 9998 5555543 36899999999642 1 3567788999999999998887542 1114
Q ss_pred Ccee
Q psy17489 173 RFCE 176 (177)
Q Consensus 173 ~~v~ 176 (177)
++|+
T Consensus 142 ~Iv~ 145 (258)
T PRK07370 142 SIVT 145 (258)
T ss_pred eEEE
Confidence 5655
No 204
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=99.37 E-value=1.8e-11 Score=89.53 Aligned_cols=117 Identities=13% Similarity=0.220 Sum_probs=84.0
Q ss_pred eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC-CCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD-KKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
+++||||.|.||..+++.|.++|. .+++++.|+ .......+.+.++.. ...++.++.+|++|+
T Consensus 2 tylitGG~gglg~~la~~La~~~~--~~~il~~r~~~~~~~~~~~i~~l~~-------------~g~~v~~~~~Dv~d~- 65 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGA--RRLILLGRSGAPSAEAEAAIRELES-------------AGARVEYVQCDVTDP- 65 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT---SEEEEEESSGGGSTTHHHHHHHHHH-------------TT-EEEEEE--TTSH-
T ss_pred EEEEECCccHHHHHHHHHHHHcCC--CEEEEeccCCCccHHHHHHHHHHHh-------------CCCceeeeccCccCH-
Confidence 689999999999999999999973 799999998 334444445554433 245789999999998
Q ss_pred CCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489 117 LGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKECVNLKRFCE 176 (177)
Q Consensus 117 ~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~ 176 (177)
+++.++++ +++.|||+|+.... .+.+...+...+.++.+|.++.... .++.||+
T Consensus 66 -----~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~-~l~~~i~ 133 (181)
T PF08659_consen 66 -----EAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR-PLDFFIL 133 (181)
T ss_dssp -----HHHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT-TTSEEEE
T ss_pred -----HHHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC-CCCeEEE
Confidence 77877764 46899999997531 3456677899999999999999886 7777775
No 205
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.37 E-value=1.5e-11 Score=94.10 Aligned_cols=110 Identities=10% Similarity=0.095 Sum_probs=81.5
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+++++++||||+|+||+++++.|.+.| .+|++++|+... . +.+...+.. ...++.++.+|+
T Consensus 6 ~~~~k~ilItGasg~IG~~~a~~l~~~G---~~Vi~~~r~~~~--~-~~~~~~l~~------------~~~~~~~~~~D~ 67 (258)
T PRK06949 6 NLEGKVALVTGASSGLGARFAQVLAQAG---AKVVLASRRVER--L-KELRAEIEA------------EGGAAHVVSLDV 67 (258)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHh------------cCCcEEEEEecC
Confidence 3678999999999999999999999998 589999886521 1 112111110 124678899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHH
Q psy17489 113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAK 166 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~ 166 (177)
.+. +++..+++ ++|++||+|+.... .+.++..+++|+.++.++++.+.
T Consensus 68 ~~~------~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 129 (258)
T PRK06949 68 TDY------QSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVA 129 (258)
T ss_pred CCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHH
Confidence 987 55655543 68999999996431 35677789999999999988765
No 206
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.37 E-value=1.2e-11 Score=96.00 Aligned_cols=113 Identities=9% Similarity=0.094 Sum_probs=82.2
Q ss_pred ccccCCCceEEEecCC--cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEE
Q psy17489 30 VDDFYRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQV 107 (177)
Q Consensus 30 ~~~~~~~~~vlVtG~~--G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 107 (177)
-+..+++|+++||||+ ++||.++++.|++.| ++|++..|++. ..+++.++... ......
T Consensus 4 ~~~~~~~k~~lItGas~~~GIG~aia~~la~~G---~~V~l~~r~~~---~~~~~~~l~~~-------------~~~~~~ 64 (272)
T PRK08159 4 ASGLMAGKRGLILGVANNRSIAWGIAKACRAAG---AELAFTYQGDA---LKKRVEPLAAE-------------LGAFVA 64 (272)
T ss_pred ccccccCCEEEEECCCCCCcHHHHHHHHHHHCC---CEEEEEcCchH---HHHHHHHHHHh-------------cCCceE
Confidence 3456788999999997 899999999999999 58887776421 12333332221 123456
Q ss_pred EeCCCCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-----------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 108 IPSNLESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-----------FDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 108 ~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-----------~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+++|++++ ++++.++ .++|++|||||... ..+.|+..+++|+.++..+++.+..
T Consensus 65 ~~~Dl~~~------~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~ 136 (272)
T PRK08159 65 GHCDVTDE------ASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEK 136 (272)
T ss_pred EecCCCCH------HHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 88999998 5555543 36899999999742 1356788899999999999988765
No 207
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.36 E-value=4.9e-12 Score=98.30 Aligned_cols=99 Identities=19% Similarity=0.256 Sum_probs=70.1
Q ss_pred EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489 39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG 118 (177)
Q Consensus 39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 118 (177)
|+||||+||||+++++.|++.| .+|++++|+....... ....+ .|+..
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~-----------------------~~~~~--~~~~~---- 48 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDG---HEVTILTRSPPAGANT-----------------------KWEGY--KPWAP---- 48 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcC---CEEEEEeCCCCCCCcc-----------------------cceee--ecccc----
Confidence 6899999999999999999998 5899999976432100 00011 11111
Q ss_pred CCHHHHHHHhcCCcEEEEcCcccCc-----hHHHHHHHHHhHHHHHHHHHHHHhcCCCCC
Q psy17489 119 LSEDSEQLIKSKVNIIFHCAASLRF-----DEALQKAIRANLYATKQMLNLAKECVNLKR 173 (177)
Q Consensus 119 ~~~~~~~~~~~~~d~vi~~aa~~~~-----~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~ 173 (177)
......+.++|+|||+||.... ......++++|+.++.+++++|++. ++++
T Consensus 49 ---~~~~~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~ 104 (292)
T TIGR01777 49 ---LAESEALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAA-EQKP 104 (292)
T ss_pred ---cchhhhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhc-CCCc
Confidence 1234456789999999997432 1234567899999999999999998 6543
No 208
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.36 E-value=5.3e-12 Score=98.17 Aligned_cols=93 Identities=19% Similarity=0.297 Sum_probs=74.4
Q ss_pred eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCC
Q psy17489 38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHL 117 (177)
Q Consensus 38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 117 (177)
+|+||||+||||+++++.|++.| ++|++++|. .+|+.+.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g---~~v~~~~r~------------------------------------~~d~~~~-- 39 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEG---RVVVALTSS------------------------------------QLDLTDP-- 39 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcC---CEEEEeCCc------------------------------------ccCCCCH--
Confidence 48999999999999999999998 578887763 2466666
Q ss_pred CCCHHHHHHHhcC--CcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 118 GLSEDSEQLIKSK--VNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 118 ~~~~~~~~~~~~~--~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+.+..++++ +|+|||+|+..... .....++++|+.++.+++++|++. +. +|||+
T Consensus 40 ----~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~ 98 (287)
T TIGR01214 40 ----EALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARH-GA-RLVHI 98 (287)
T ss_pred ----HHHHHHHHhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEE
Confidence 677877775 49999999975432 234567899999999999999987 54 78874
No 209
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.36 E-value=3.5e-11 Score=92.16 Aligned_cols=123 Identities=17% Similarity=0.153 Sum_probs=84.1
Q ss_pred CCCceEEEecCCc--chHHHHHHHHHhhCCCcCeEEEEEeCCCCCC------hHHH--HHHHHhhhhhhcccccCcccCC
Q psy17489 34 YRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS------PEER--VKNMLNSVIFDRLNKEVPDFRS 103 (177)
Q Consensus 34 ~~~~~vlVtG~~G--~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~------~~~~--~~~~~~~~~~~~~~~~~~~~~~ 103 (177)
+++++++||||+| +||.++++.|++.| ++|++++|++.... ..+. +..... ....
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~G---~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~ 67 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAKG---IDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIE------------SYGV 67 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHcC---CcEEEEcCCccccccccccchhhHHHHHHHHH------------hcCC
Confidence 4678999999995 79999999999999 58888888722110 0011 111111 1124
Q ss_pred CeEEEeCCCCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc-
Q psy17489 104 KIQVIPSNLESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC- 168 (177)
Q Consensus 104 ~v~~~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~- 168 (177)
++.++.+|+++. +++..++ .++|+|||+||.... .+.++..+++|+.++..+++.+...
T Consensus 68 ~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 141 (256)
T PRK12748 68 RCEHMEIDLSQP------YAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQY 141 (256)
T ss_pred eEEEEECCCCCH------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 688999999997 4554443 358999999987432 2456778999999999999887542
Q ss_pred --CCCCCceeC
Q psy17489 169 --VNLKRFCEL 177 (177)
Q Consensus 169 --~~~~~~v~v 177 (177)
....+||++
T Consensus 142 ~~~~~~~iv~~ 152 (256)
T PRK12748 142 DGKAGGRIINL 152 (256)
T ss_pred hhcCCeEEEEE
Confidence 123466653
No 210
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.36 E-value=1.8e-11 Score=94.11 Aligned_cols=109 Identities=12% Similarity=0.087 Sum_probs=79.9
Q ss_pred CCCceEEEecCC--cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489 34 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN 111 (177)
Q Consensus 34 ~~~~~vlVtG~~--G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D 111 (177)
+++|+++||||+ ++||.++++.|++.| .+|++.+|+... .+.+.+...+ .....++++|
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~G---~~v~l~~r~~~~---~~~~~~~~~~-------------~~~~~~~~~D 68 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRALG---AELAVTYLNDKA---RPYVEPLAEE-------------LDAPIFLPLD 68 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcC---CEEEEEeCChhh---HHHHHHHHHh-------------hccceEEecC
Confidence 578999999998 599999999999999 588888886421 1222222111 1234578899
Q ss_pred CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-----------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-----------FDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-----------~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+++. ++++.++ .++|++|||||... ..++|+..+++|+.++..+++.+..
T Consensus 69 ~~~~------~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p 136 (258)
T PRK07533 69 VREP------GQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEP 136 (258)
T ss_pred cCCH------HHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 9998 5555543 36899999999642 1356788999999999999998754
No 211
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.36 E-value=1.7e-11 Score=95.19 Aligned_cols=106 Identities=14% Similarity=0.201 Sum_probs=79.0
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+|+++|||+ |+||.++++.|. .| ++|++++|+... . +.+.+.... ...++.++.+|+++.
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G---~~Vv~~~r~~~~--~-~~~~~~l~~------------~~~~~~~~~~Dv~d~ 61 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AG---KKVLLADYNEEN--L-EAAAKTLRE------------AGFDVSTQEVDVSSR 61 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CC---CEEEEEeCCHHH--H-HHHHHHHHh------------cCCeEEEEEeecCCH
Confidence 578999998 799999999996 67 689999886421 1 111111110 124678899999998
Q ss_pred CCCCCHHHHHHHh------cCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 116 HLGLSEDSEQLIK------SKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 116 ~~~~~~~~~~~~~------~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+++..++ .++|++|||||......+++..+++|+.++.++++.+..
T Consensus 62 ------~~i~~~~~~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 113 (275)
T PRK06940 62 ------ESVKALAATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGK 113 (275)
T ss_pred ------HHHHHHHHHHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHH
Confidence 5555554 368999999998765677889999999999999998765
No 212
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.36 E-value=4.3e-11 Score=94.39 Aligned_cols=114 Identities=11% Similarity=0.114 Sum_probs=80.3
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCC-------CChHHHHHHHHhhhhhhcccccCcccCCCe
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG-------SSPEERVKNMLNSVIFDRLNKEVPDFRSKI 105 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 105 (177)
.+++|+++||||+++||.++++.|++.| .+|++.+|+... ....+.+.+.+. ....++
T Consensus 5 ~l~~k~~lITGgs~GIG~aia~~la~~G---~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~------------~~~~~~ 69 (305)
T PRK08303 5 PLRGKVALVAGATRGAGRGIAVELGAAG---ATVYVTGRSTRARRSEYDRPETIEETAELVT------------AAGGRG 69 (305)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEecccccccccccccchHHHHHHHHH------------hcCCce
Confidence 3678999999999999999999999999 688888887421 111111221111 012457
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHh-------cCCcEEEEcC-ccc------C-c----hHHHHHHHHHhHHHHHHHHHHHH
Q psy17489 106 QVIPSNLESEHLGLSEDSEQLIK-------SKVNIIFHCA-ASL------R-F----DEALQKAIRANLYATKQMLNLAK 166 (177)
Q Consensus 106 ~~~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a-a~~------~-~----~~~~~~~~~~nv~~~~~ll~~~~ 166 (177)
.++++|++++ ++++.++ .++|++|||| |.. . . .+.+.+.+++|+.+...+.+++.
T Consensus 70 ~~~~~Dv~~~------~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l 143 (305)
T PRK08303 70 IAVQVDHLVP------EQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFAL 143 (305)
T ss_pred EEEEcCCCCH------HHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 7899999998 5555543 3689999999 631 1 1 24567788999999998888765
Q ss_pred h
Q psy17489 167 E 167 (177)
Q Consensus 167 ~ 167 (177)
.
T Consensus 144 p 144 (305)
T PRK08303 144 P 144 (305)
T ss_pred H
Confidence 4
No 213
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.36 E-value=2.8e-11 Score=92.92 Aligned_cols=110 Identities=15% Similarity=0.247 Sum_probs=81.4
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+|+||.++++.|++.| ++|++++|+... . +.+.+.+.. ....++.++.+|++
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~l~~-----------~~~~~~~~~~~D~~ 67 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAEG---CHLHLVARDADA--L-EALAADLRA-----------AHGVDVAVHALDLS 67 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcC---CEEEEEeCCHHH--H-HHHHHHHHh-----------hcCCceEEEEecCC
Confidence 468999999999999999999999998 589999886521 1 111111110 01246788999999
Q ss_pred CCCCCCCHHHHHHHhc---CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH
Q psy17489 114 SEHLGLSEDSEQLIKS---KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK 166 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~---~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~ 166 (177)
+. +++..+++ ++|++|||||... ..+.|+..+++|+.+...+.+.+.
T Consensus 68 ~~------~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 124 (259)
T PRK06125 68 SP------EAREQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAY 124 (259)
T ss_pred CH------HHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 97 56665544 6899999999642 135778889999999999988764
No 214
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.35 E-value=1.3e-11 Score=102.15 Aligned_cols=118 Identities=17% Similarity=0.178 Sum_probs=85.5
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+.+++++||||+|+||..+++.|.+.| .+|+++++.... +.+.+.... -+..++.+|+
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~G---a~vi~~~~~~~~----~~l~~~~~~--------------~~~~~~~~Dv 265 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDG---AHVVCLDVPAAG----EALAAVANR--------------VGGTALALDI 265 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCC---CEEEEEeCCccH----HHHHHHHHH--------------cCCeEEEEeC
Confidence 4578999999999999999999999998 688888875322 222222111 1235788899
Q ss_pred CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhcC---CCCCce
Q psy17489 113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKECV---NLKRFC 175 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~~---~~~~~v 175 (177)
++. +++..+++ ++|+|||+||... ..+.++..+++|+.++.++.+.+.... +-.+||
T Consensus 266 ~~~------~~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv 339 (450)
T PRK08261 266 TAP------DAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIV 339 (450)
T ss_pred CCH------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEE
Confidence 987 55555433 6899999999753 246678889999999999999987631 224666
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
++
T Consensus 340 ~~ 341 (450)
T PRK08261 340 GV 341 (450)
T ss_pred EE
Confidence 53
No 215
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.35 E-value=1.5e-11 Score=95.41 Aligned_cols=110 Identities=14% Similarity=0.176 Sum_probs=79.5
Q ss_pred cCCCceEEEecCCc--chHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489 33 FYRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS 110 (177)
Q Consensus 33 ~~~~~~vlVtG~~G--~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 110 (177)
++++|+++||||++ +||.++++.|++.| ++|++.+|+.. ..+.+.+.... .....++++
T Consensus 4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~G---a~V~~~~r~~~---~~~~~~~~~~~-------------~g~~~~~~~ 64 (271)
T PRK06505 4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQG---AELAFTYQGEA---LGKRVKPLAES-------------LGSDFVLPC 64 (271)
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHhCC---CEEEEecCchH---HHHHHHHHHHh-------------cCCceEEeC
Confidence 35789999999997 99999999999999 58888877531 11223322111 012346889
Q ss_pred CCCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-----------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 111 NLESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-----------FDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 111 D~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-----------~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
|+++. ++++.++ .++|++|||||... ..++|+..+++|+.++.++++.+..
T Consensus 65 Dv~d~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~ 133 (271)
T PRK06505 65 DVEDI------ASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAK 133 (271)
T ss_pred CCCCH------HHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHH
Confidence 99998 5555543 46899999999642 1356778899999999999887754
No 216
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.35 E-value=3.6e-11 Score=92.51 Aligned_cols=120 Identities=11% Similarity=0.122 Sum_probs=83.6
Q ss_pred CCCceEEEecCC--cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489 34 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN 111 (177)
Q Consensus 34 ~~~~~vlVtG~~--G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D 111 (177)
+.+|+++||||+ ++||.++++.|++.| ++|++.+|+.... +.+++.... . ...++.++++|
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la~~G---~~v~~~~r~~~~~---~~~~~~~~~---------~--~~~~~~~~~~D 67 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLHNAG---AKLVFTYAGERLE---KEVRELADT---------L--EGQESLLLPCD 67 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCC---CEEEEecCcccch---HHHHHHHHH---------c--CCCceEEEecC
Confidence 568999999997 899999999999999 5888887753222 233332221 0 02467889999
Q ss_pred CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-----------chHHHHHHHHHhHHHHHHHHHHHHhc-CCCC
Q psy17489 112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-----------FDEALQKAIRANLYATKQMLNLAKEC-VNLK 172 (177)
Q Consensus 112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-----------~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~ 172 (177)
++++ ++++.++ .++|++|||||... ..+.|...+++|+.++..+.+.+... .+-.
T Consensus 68 v~d~------~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g 141 (257)
T PRK08594 68 VTSD------EEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGG 141 (257)
T ss_pred CCCH------HHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCc
Confidence 9998 5555443 46899999998642 12456677899999999888877643 1123
Q ss_pred Ccee
Q psy17489 173 RFCE 176 (177)
Q Consensus 173 ~~v~ 176 (177)
++|+
T Consensus 142 ~Iv~ 145 (257)
T PRK08594 142 SIVT 145 (257)
T ss_pred eEEE
Confidence 5655
No 217
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.35 E-value=1.9e-11 Score=93.62 Aligned_cols=112 Identities=15% Similarity=0.204 Sum_probs=80.7
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+++|+++||||+|+||.++++.|.+.|+ ..|++++|+... ........ . ....++.++.+|+
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~--~~V~~~~r~~~~--~~~~~~~l-~------------~~~~~~~~~~~D~ 65 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGA--AGLVICGRNAEK--GEAQAAEL-E------------ALGAKAVFVQADL 65 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCC--CeEEEEcCCHHH--HHHHHHHH-H------------hcCCeEEEEEccC
Confidence 36789999999999999999999999984 238888886421 11111111 1 0124577889999
Q ss_pred CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+++ +++..+++ ++|++||+||... ..+.++..+++|+.++.++++.+.+
T Consensus 66 ~~~------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 128 (260)
T PRK06198 66 SDV------EDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIK 128 (260)
T ss_pred CCH------HHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 987 55555443 6899999999743 2355667899999999999888754
No 218
>PRK08017 oxidoreductase; Provisional
Probab=99.34 E-value=2.1e-11 Score=93.16 Aligned_cols=110 Identities=17% Similarity=0.152 Sum_probs=78.3
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
++++||||+|+||.++++.|.+.| .+|++++|+.. +++.... .++.++.+|+.+.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g---~~v~~~~r~~~------~~~~~~~---------------~~~~~~~~D~~~~- 57 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRG---YRVLAACRKPD------DVARMNS---------------LGFTGILLDLDDP- 57 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHH------HhHHHHh---------------CCCeEEEeecCCH-
Confidence 689999999999999999999998 58888888652 2221111 2467788999887
Q ss_pred CCCCHHHHHHHh--------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHH----HHHHHhcCCCCCceeC
Q psy17489 117 LGLSEDSEQLIK--------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQM----LNLAKECVNLKRFCEL 177 (177)
Q Consensus 117 ~~~~~~~~~~~~--------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~l----l~~~~~~~~~~~~v~v 177 (177)
+++..++ ..+|.++|++|... ..+.++..+++|+.++.++ ++.+.+. +.+++|++
T Consensus 58 -----~~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~~ 131 (256)
T PRK08017 58 -----ESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-GEGRIVMT 131 (256)
T ss_pred -----HHHHHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCEEEEE
Confidence 4444332 35789999999643 1345667899999998886 4445555 56677763
No 219
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.34 E-value=2.3e-11 Score=91.63 Aligned_cols=111 Identities=12% Similarity=0.153 Sum_probs=80.5
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+++||||+|+||+++++.|.+.| ++|++.+|+. +++.+.... .++.++++|+++.
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g---~~v~~~~r~~------~~~~~~~~~--------------~~~~~~~~D~~~~- 56 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDG---HKVTLVGARR------DDLEVAAKE--------------LDVDAIVCDNTDP- 56 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHh--------------ccCcEEecCCCCH-
Confidence 369999999999999999999998 5888888864 222222111 1356788999998
Q ss_pred CCCCHHHHHHHhc----CCcEEEEcCcccC------------chHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCcee
Q psy17489 117 LGLSEDSEQLIKS----KVNIIFHCAASLR------------FDEALQKAIRANLYATKQMLNLAKEC-VNLKRFCE 176 (177)
Q Consensus 117 ~~~~~~~~~~~~~----~~d~vi~~aa~~~------------~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~ 176 (177)
+++..+++ ++|++||||+... ..+.|+..+++|+.++.++++++.+. ..-.++|+
T Consensus 57 -----~~v~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~ 128 (223)
T PRK05884 57 -----ASLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIIS 128 (223)
T ss_pred -----HHHHHHHHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEE
Confidence 56666554 5899999997410 13567788999999999999988652 11245654
No 220
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.34 E-value=2e-11 Score=93.13 Aligned_cols=117 Identities=15% Similarity=0.137 Sum_probs=81.8
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+++||||+|+||.++++.|++.| .+|+++.|+.. .. ..+.+... ....++.++.+|++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G---~~v~~~~r~~~--~~-~~~~~~l~------------~~~~~~~~~~~Dl~~~- 61 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDG---FAVAVADLNEE--TA-KETAKEIN------------QAGGKAVAYKLDVSDK- 61 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHH--HH-HHHHHHHH------------hcCCeEEEEEcCCCCH-
Confidence 579999999999999999999998 58888888642 11 11111111 0124678899999998
Q ss_pred CCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh----cCCCCCceeC
Q psy17489 117 LGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE----CVNLKRFCEL 177 (177)
Q Consensus 117 ~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~v 177 (177)
+++.+++ ..+|++||+|+... ..++++..+++|+.++..+++.+.. .....++|++
T Consensus 62 -----~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~ 135 (254)
T TIGR02415 62 -----DQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINA 135 (254)
T ss_pred -----HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 5555543 35799999999742 2356778899999999888776543 2122466653
No 221
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.34 E-value=3.6e-11 Score=91.18 Aligned_cols=122 Identities=17% Similarity=0.126 Sum_probs=81.2
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+|+||.++++.|++.| .+|++++|+... ..+...++... ....+.++.+|+.
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g---~~V~~~~r~~~~--~~~~~~~l~~~------------~~~~~~~~~~D~~ 66 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAG---ATVILVARHQKK--LEKVYDAIVEA------------GHPEPFAIRFDLM 66 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcC---CEEEEEeCChHH--HHHHHHHHHHc------------CCCCcceEEeeec
Confidence 567899999999999999999999998 589999987631 11111111110 1134567788887
Q ss_pred CCCCCCCHHHHHH-------Hh-cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCc
Q psy17489 114 SEHLGLSEDSEQL-------IK-SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRF 174 (177)
Q Consensus 114 ~~~~~~~~~~~~~-------~~-~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~ 174 (177)
+... +.+.. .+ .++|++||+||... ..+++...+++|+.++.++++.+.+. .+..++
T Consensus 67 ~~~~----~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~i 142 (239)
T PRK08703 67 SAEE----KEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASV 142 (239)
T ss_pred ccch----HHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEE
Confidence 6311 22222 23 46899999999632 13566678999999999998877542 134466
Q ss_pred ee
Q psy17489 175 CE 176 (177)
Q Consensus 175 v~ 176 (177)
|+
T Consensus 143 v~ 144 (239)
T PRK08703 143 IF 144 (239)
T ss_pred EE
Confidence 65
No 222
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.34 E-value=4e-11 Score=90.06 Aligned_cols=102 Identities=11% Similarity=0.146 Sum_probs=77.8
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+++++||||+|+||+++++.|++.| .+|++++|+.. ..+.... ..+.++.+|+++.
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G---~~v~~~~r~~~------~~~~~~~---------------~~~~~~~~D~~~~ 56 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADG---WRVIATARDAA------ALAALQA---------------LGAEALALDVADP 56 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCC---CEEEEEECCHH------HHHHHHh---------------ccceEEEecCCCH
Confidence 3689999999999999999999998 58888888642 1111111 2356789999998
Q ss_pred CCCCCHHHHHHHh---c--CCcEEEEcCcccC---------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 116 HLGLSEDSEQLIK---S--KVNIIFHCAASLR---------FDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 116 ~~~~~~~~~~~~~---~--~~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+.+..++ . ++|++||++|... ..++++..+++|+.++.++++.+.+
T Consensus 57 ------~~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 116 (222)
T PRK06953 57 ------ASVAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLP 116 (222)
T ss_pred ------HHHHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHH
Confidence 5565543 2 4899999999752 2356778899999999999988865
No 223
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.34 E-value=2.6e-11 Score=92.30 Aligned_cols=108 Identities=12% Similarity=0.118 Sum_probs=74.3
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+|+++||||+|+||..+++.|++.| .+|++..++.. +...+...+. .. ...++.++.+|+++.
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g---~~v~~~~~~~~-~~~~~~~~~~-~~------------~~~~~~~~~~Dl~~~ 64 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARG---WSVGINYARDA-AAAEETADAV-RA------------AGGRACVVAGDVANE 64 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCC---CEEEEEeCCCH-HHHHHHHHHH-Hh------------cCCcEEEEEeccCCH
Confidence 4689999999999999999999998 46766554321 1111111111 10 124688999999987
Q ss_pred CCCCCHHHHHHHh-------cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHH
Q psy17489 116 HLGLSEDSEQLIK-------SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAK 166 (177)
Q Consensus 116 ~~~~~~~~~~~~~-------~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~ 166 (177)
+++..++ .++|++||+||... ..++++..+++|+.++..+++.+.
T Consensus 65 ------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 124 (248)
T PRK06947 65 ------ADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAA 124 (248)
T ss_pred ------HHHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHH
Confidence 4554443 36899999999642 134566789999999988876543
No 224
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.34 E-value=2.9e-11 Score=92.96 Aligned_cols=109 Identities=14% Similarity=0.137 Sum_probs=79.2
Q ss_pred CCCceEEEecC--CcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489 34 YRDGQILVTGG--TGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN 111 (177)
Q Consensus 34 ~~~~~vlVtG~--~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D 111 (177)
+.+|+++|||| +++||.++++.|++.| ++|++.+|+...+ ..+.+.+. ...++.++++|
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G---~~v~l~~r~~~~~-~~~~~~~~---------------~~~~~~~~~~D 65 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQG---AEVVLTGFGRALR-LTERIAKR---------------LPEPAPVLELD 65 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCC---CEEEEecCccchh-HHHHHHHh---------------cCCCCcEEeCC
Confidence 57899999999 8999999999999999 6888888754211 11222111 11256788999
Q ss_pred CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------c----hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------F----DEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~----~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
++++ ++++.++ .++|++|||||... . .+.++..+++|+.++..+.+.+..
T Consensus 66 v~~~------~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~ 133 (256)
T PRK07889 66 VTNE------EHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLP 133 (256)
T ss_pred CCCH------HHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 9998 4555443 46899999999752 1 245666799999999999888754
No 225
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.33 E-value=2.8e-11 Score=91.32 Aligned_cols=116 Identities=18% Similarity=0.236 Sum_probs=82.8
Q ss_pred EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489 39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG 118 (177)
Q Consensus 39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 118 (177)
++|||++|+||.++++.|++.| ++|++++|+... .. +.+..... ....++.++.+|+++.
T Consensus 1 vlItG~~g~iG~~la~~l~~~G---~~v~~~~r~~~~-~~-~~~~~~~~------------~~~~~~~~~~~D~~~~--- 60 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEG---AKVIITYRSSEE-GA-EEVVEELK------------AYGVKALGVVCDVSDR--- 60 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCchh-HH-HHHHHHHH------------hcCCceEEEEecCCCH---
Confidence 5899999999999999999999 588888886521 11 11211111 0124578899999998
Q ss_pred CCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489 119 LSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL 177 (177)
Q Consensus 119 ~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v 177 (177)
+.+..++. .+|+|||++|.... .+.++..+++|+.++.++++.+.+. .+.++||++
T Consensus 61 ---~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~ 133 (239)
T TIGR01830 61 ---EDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINI 133 (239)
T ss_pred ---HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 55555543 57999999997531 3566778999999999999988653 245577764
No 226
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.33 E-value=2.7e-11 Score=104.39 Aligned_cols=120 Identities=9% Similarity=0.142 Sum_probs=86.7
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+++|+++||||+|+||.++++.|++.| ++|++++|++.. . +.+.+... ....++.++.+|+
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~------------~~~~~~~~~~~Dv 429 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAG---ATVFLVARNGEA--L-DELVAEIR------------AKGGTAHAYTCDL 429 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH--H-HHHHHHHH------------hcCCcEEEEEecC
Confidence 3568999999999999999999999999 589999986521 1 11111111 0124688899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc---------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCC
Q psy17489 113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF---------DEALQKAIRANLYATKQMLNLAK----ECVNLK 172 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~---------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~ 172 (177)
++. +++..+++ ++|++|||||.... .++++..+++|+.++.++++.+. +. +..
T Consensus 430 ~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g 502 (657)
T PRK07201 430 TDS------AAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER-RFG 502 (657)
T ss_pred CCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCC
Confidence 998 56665544 68999999996421 24567789999999998877753 33 456
Q ss_pred CceeC
Q psy17489 173 RFCEL 177 (177)
Q Consensus 173 ~~v~v 177 (177)
+||++
T Consensus 503 ~iv~i 507 (657)
T PRK07201 503 HVVNV 507 (657)
T ss_pred EEEEE
Confidence 77764
No 227
>KOG1201|consensus
Probab=99.33 E-value=2.2e-11 Score=93.73 Aligned_cols=116 Identities=18% Similarity=0.206 Sum_probs=83.0
Q ss_pred cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489 31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS 110 (177)
Q Consensus 31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 110 (177)
.....|+.|+||||++++|+.++.+++++| .++++.+.++... ++..+...+ . .++..+.+
T Consensus 33 ~k~v~g~~vLITGgg~GlGr~ialefa~rg---~~~vl~Din~~~~--~etv~~~~~-------------~-g~~~~y~c 93 (300)
T KOG1201|consen 33 LKSVSGEIVLITGGGSGLGRLIALEFAKRG---AKLVLWDINKQGN--EETVKEIRK-------------I-GEAKAYTC 93 (300)
T ss_pred hhhccCCEEEEeCCCchHHHHHHHHHHHhC---CeEEEEeccccch--HHHHHHHHh-------------c-CceeEEEe
Confidence 345689999999999999999999999999 6788888776432 122222211 1 36889999
Q ss_pred CCCCCC-CCCCHHHHHHHhcCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHH
Q psy17489 111 NLESEH-LGLSEDSEQLIKSKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLA 165 (177)
Q Consensus 111 D~~~~~-~~~~~~~~~~~~~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~ 165 (177)
|++++. +-...+.+++-++++|++|||||+... .+..+..+++|+.+.+...++.
T Consensus 94 dis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaF 156 (300)
T KOG1201|consen 94 DISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAF 156 (300)
T ss_pred cCCCHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 999983 111112223334479999999998642 4667788999999988877764
No 228
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.33 E-value=9.7e-11 Score=89.87 Aligned_cols=127 Identities=16% Similarity=0.139 Sum_probs=82.7
Q ss_pred cCCCceEEEecCCc--chHHHHHHHHHhhCCCcCeEEEEEeCCCCC-----ChHHHHHHHHhhhhhhcccccCcccCCCe
Q psy17489 33 FYRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDKKGS-----SPEERVKNMLNSVIFDRLNKEVPDFRSKI 105 (177)
Q Consensus 33 ~~~~~~vlVtG~~G--~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 105 (177)
.+++|+++||||+| +||.++++.|++.| .+|++..|..... ...+...+... .+ .....++
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G---~~vi~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~g~~~ 70 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAG---ADIFFTYWTAYDKEMPWGVDQDEQIQLQE-----EL----LKNGVKV 70 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHHHCC---CeEEEEecccccccccccccHHHHHHHHH-----HH----HhcCCeE
Confidence 46789999999995 89999999999999 5777765432110 00111111111 00 0123467
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---
Q psy17489 106 QVIPSNLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC--- 168 (177)
Q Consensus 106 ~~~~~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~--- 168 (177)
.++++|+++. +++..+++ ++|++||+||.... .+.++..+++|+.++..+.+.+...
T Consensus 71 ~~~~~D~~~~------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 144 (256)
T PRK12859 71 SSMELDLTQN------DAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDK 144 (256)
T ss_pred EEEEcCCCCH------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 8899999998 55555443 58999999996431 3467778999999999886554321
Q ss_pred CCCCCceeC
Q psy17489 169 VNLKRFCEL 177 (177)
Q Consensus 169 ~~~~~~v~v 177 (177)
.+-.+||++
T Consensus 145 ~~~g~iv~i 153 (256)
T PRK12859 145 KSGGRIINM 153 (256)
T ss_pred cCCeEEEEE
Confidence 133467763
No 229
>PRK07069 short chain dehydrogenase; Validated
Probab=99.32 E-value=4.1e-11 Score=91.21 Aligned_cols=118 Identities=10% Similarity=0.184 Sum_probs=79.0
Q ss_pred eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCC
Q psy17489 38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHL 117 (177)
Q Consensus 38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 117 (177)
+++||||+|+||.++++.|++.| ++|++++|+.. ... +.+.+.+.. .. ....+..+++|+.+.
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G---~~v~~~~r~~~-~~~-~~~~~~~~~--------~~--~~~~~~~~~~D~~~~-- 63 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQG---AKVFLTDINDA-AGL-DAFAAEINA--------AH--GEGVAFAAVQDVTDE-- 63 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCcc-hHH-HHHHHHHHh--------cC--CCceEEEEEeecCCH--
Confidence 38999999999999999999999 58999888632 111 222221110 00 012345678899987
Q ss_pred CCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHH----HHHHHHHHHHhcCCCCCceeC
Q psy17489 118 GLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLY----ATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 118 ~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~----~~~~ll~~~~~~~~~~~~v~v 177 (177)
+++..++ .++|++||+||.... .+++...+++|+. .+..+++.+++. +.++||++
T Consensus 64 ----~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~ 136 (251)
T PRK07069 64 ----AQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-QPASIVNI 136 (251)
T ss_pred ----HHHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCcEEEEe
Confidence 5555543 368999999997542 3456678899998 555566666665 56777764
No 230
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.32 E-value=2.8e-11 Score=88.47 Aligned_cols=107 Identities=21% Similarity=0.282 Sum_probs=81.3
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
..|-+||||||+.+||..++++|.+.| .+|++.+|++ +++.+..+ ..+.+....+|+.
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elg---N~VIi~gR~e------~~L~e~~~-------------~~p~~~t~v~Dv~ 60 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELG---NTVIICGRNE------ERLAEAKA-------------ENPEIHTEVCDVA 60 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHhC---CEEEEecCcH------HHHHHHHh-------------cCcchheeeeccc
Confidence 467899999999999999999999999 6999999976 44444333 2367788889999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc---------hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF---------DEALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~---------~~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
|. ++.+.+++ ..+++|||||+... .++.++-+.+|..++..|.+....+
T Consensus 61 d~------~~~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lph 125 (245)
T COG3967 61 DR------DSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPH 125 (245)
T ss_pred ch------hhHHHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHH
Confidence 97 44444432 57999999998531 2334556899999999888776543
No 231
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.32 E-value=4e-11 Score=91.03 Aligned_cols=107 Identities=16% Similarity=0.141 Sum_probs=74.8
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEE-EeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-VRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
++++||||+|+||.++++.|++.| ++|++. .|+. ....+...+... ...++.++.+|+.+.
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g---~~v~~~~~~~~--~~~~~~~~~~~~-------------~~~~~~~~~~D~~d~ 63 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEG---YTVAVNYQQNL--HAAQEVVNLITQ-------------AGGKAFVLQADISDE 63 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCCh--HHHHHHHHHHHh-------------CCCeEEEEEccCCCH
Confidence 689999999999999999999998 467654 3432 111111111111 123578899999998
Q ss_pred CCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 116 HLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 116 ~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+++..+++ .+|++||+|+... ..++++..+++|+.++..+++.+..
T Consensus 64 ------~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 124 (247)
T PRK09730 64 ------NQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVK 124 (247)
T ss_pred ------HHHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 56665544 5789999999642 1345677899999999888776644
No 232
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.32 E-value=5.2e-11 Score=90.11 Aligned_cols=103 Identities=16% Similarity=0.200 Sum_probs=76.8
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+|+++||||+|+||.++++.|++.| ++|++++|++.. ..+.+.. ..+.++.+|+.+.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~--~~~~~~~------------------~~~~~~~~D~~~~ 58 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQG---QPVIVSYRTHYP--AIDGLRQ------------------AGAQCIQADFSTN 58 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCC---CeEEEEeCCchh--HHHHHHH------------------cCCEEEEcCCCCH
Confidence 5799999999999999999999999 588988886531 1111111 2357889999987
Q ss_pred CCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 116 HLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 116 ~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+++..++ .++|++||+||... ..+.++..+++|+.++..+.+.+..
T Consensus 59 ------~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~ 118 (236)
T PRK06483 59 ------AGIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALED 118 (236)
T ss_pred ------HHHHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHH
Confidence 4444433 35899999999642 1466788899999999988776654
No 233
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.31 E-value=7.3e-12 Score=97.92 Aligned_cols=94 Identities=24% Similarity=0.365 Sum_probs=68.7
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+|+||||+|++|.++...|.+.| ..|+...|. ..|+.+.
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~---~~v~~~~r~------------------------------------~~dl~d~- 40 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERG---YEVIATSRS------------------------------------DLDLTDP- 40 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTS---EEEEEESTT------------------------------------CS-TTSH-
T ss_pred CEEEEECCCCHHHHHHHHHHhhCC---CEEEEeCch------------------------------------hcCCCCH-
Confidence 689999999999999999999887 477777552 4577776
Q ss_pred CCCCHHHHHHHhc--CCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 117 LGLSEDSEQLIKS--KVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+.+...++ +.|+|||+||.... ....+..+++|+.++.+|+++|.+. +. ++||+
T Consensus 41 -----~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~-~~-~li~~ 99 (286)
T PF04321_consen 41 -----EAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKER-GA-RLIHI 99 (286)
T ss_dssp -----HHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC-T--EEEEE
T ss_pred -----HHHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc-CC-cEEEe
Confidence 67777765 58999999998754 3456678999999999999999997 55 77764
No 234
>PRK05855 short chain dehydrogenase; Validated
Probab=99.31 E-value=3.1e-11 Score=102.12 Aligned_cols=121 Identities=12% Similarity=0.120 Sum_probs=86.2
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
...+++++||||+|+||.++++.|.+.| .+|++++|+... . +.+.+.... ...++.++.+|+
T Consensus 312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G---~~v~~~~r~~~~--~-~~~~~~~~~------------~~~~~~~~~~Dv 373 (582)
T PRK05855 312 PFSGKLVVVTGAGSGIGRETALAFAREG---AEVVASDIDEAA--A-ERTAELIRA------------AGAVAHAYRVDV 373 (582)
T ss_pred cCCCCEEEEECCcCHHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHh------------cCCeEEEEEcCC
Confidence 3467899999999999999999999999 579998886421 1 112111110 124678899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh----cCCCCCc
Q psy17489 113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE----CVNLKRF 174 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~ 174 (177)
++. +++..+++ ++|++|||||.... .+.++..+++|+.++.++++.+.. .+.-.+|
T Consensus 374 ~~~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~i 447 (582)
T PRK05855 374 SDA------DAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHI 447 (582)
T ss_pred CCH------HHHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEE
Confidence 998 55655543 58999999997532 356778899999999999887543 2112467
Q ss_pred eeC
Q psy17489 175 CEL 177 (177)
Q Consensus 175 v~v 177 (177)
|++
T Consensus 448 v~~ 450 (582)
T PRK05855 448 VNV 450 (582)
T ss_pred EEE
Confidence 654
No 235
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.31 E-value=7.3e-11 Score=93.37 Aligned_cols=120 Identities=16% Similarity=0.156 Sum_probs=82.6
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
.+++++||||+++||.++++.|++.|. .+|++.+|+.. +..+.... + .....++.++.+|+++
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~--~~V~l~~r~~~------~~~~~~~~-----l----~~~~~~~~~~~~Dl~~ 64 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGE--WHVIMACRDFL------KAEQAAKS-----L----GMPKDSYTIMHLDLGS 64 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC--CEEEEEeCCHH------HHHHHHHH-----h----cCCCCeEEEEEcCCCC
Confidence 367999999999999999999999982 37888888642 12211110 1 0012467788999999
Q ss_pred CCCCCCHHHHHHHh-------cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHh----cC-CCCCc
Q psy17489 115 EHLGLSEDSEQLIK-------SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKE----CV-NLKRF 174 (177)
Q Consensus 115 ~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~~~ 174 (177)
. ++++.++ .++|++|||||... ..+.++..+++|+.++..+.+.+.. .+ +..++
T Consensus 65 ~------~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~I 138 (314)
T TIGR01289 65 L------DSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRL 138 (314)
T ss_pred H------HHHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeE
Confidence 8 4554443 36899999999642 1256777899999999888776543 21 13577
Q ss_pred eeC
Q psy17489 175 CEL 177 (177)
Q Consensus 175 v~v 177 (177)
|+|
T Consensus 139 V~v 141 (314)
T TIGR01289 139 IIV 141 (314)
T ss_pred EEE
Confidence 764
No 236
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.31 E-value=3.8e-11 Score=92.52 Aligned_cols=109 Identities=17% Similarity=0.138 Sum_probs=77.0
Q ss_pred CCCceEEEecC--CcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489 34 YRDGQILVTGG--TGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN 111 (177)
Q Consensus 34 ~~~~~vlVtG~--~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D 111 (177)
+++|+++|||| +++||.++++.|++.| .+|++.+|.+ +..+.+++... .......+++|
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G---~~v~~~~~~~---~~~~~~~~~~~-------------~~~~~~~~~~D 64 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQG---AELAFTYVVD---KLEERVRKMAA-------------ELDSELVFRCD 64 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCC---CEEEEEcCcH---HHHHHHHHHHh-------------ccCCceEEECC
Confidence 67899999997 6799999999999999 5788776642 12233333221 11234578999
Q ss_pred CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc------------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF------------DEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~------------~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+++. ++++.++ .++|++|||||.... .+.|+..+++|+.++..+.+.+..
T Consensus 65 v~~~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p 133 (261)
T PRK08690 65 VASD------DEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARP 133 (261)
T ss_pred CCCH------HHHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHH
Confidence 9998 5565544 368999999997531 134566788999999888876543
No 237
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.30 E-value=4.8e-11 Score=92.13 Aligned_cols=109 Identities=16% Similarity=0.153 Sum_probs=78.5
Q ss_pred CCCceEEEecCCc--chHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489 34 YRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN 111 (177)
Q Consensus 34 ~~~~~vlVtG~~G--~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D 111 (177)
+++|+++||||++ +||.++++.|++.| ++|+..+|+. ...+.+.+... ..+...++.+|
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G---~~vil~~r~~---~~~~~~~~~~~-------------~~~~~~~~~~D 64 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREG---AELAFTYQND---KLKGRVEEFAA-------------QLGSDIVLPCD 64 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCC---CEEEEEecch---hHHHHHHHHHh-------------ccCCceEeecC
Confidence 5789999999985 89999999999999 5788777752 12222332211 11345678899
Q ss_pred CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc------------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF------------DEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~------------~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+++. ++++.++ .++|++|||||.... .+.|+..+++|+.++..+.+.+..
T Consensus 65 l~~~------~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 133 (262)
T PRK07984 65 VAED------ASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRS 133 (262)
T ss_pred CCCH------HHHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 9998 5665544 358999999986421 245667889999999888887653
No 238
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.30 E-value=5.1e-11 Score=91.77 Aligned_cols=118 Identities=12% Similarity=0.104 Sum_probs=81.1
Q ss_pred CCCceEEEecC--CcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489 34 YRDGQILVTGG--TGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN 111 (177)
Q Consensus 34 ~~~~~vlVtG~--~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D 111 (177)
+++|+++|||| +++||.++++.|++.| ++|++.+|... ..+.+.+...+ ......+.+|
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G---~~v~~~~~~~~---~~~~~~~~~~~-------------~~~~~~~~~D 64 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREG---AELAFTYVGDR---FKDRITEFAAE-------------FGSDLVFPCD 64 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCC---CeEEEEccchH---HHHHHHHHHHh-------------cCCcceeecc
Confidence 57899999996 6799999999999999 57777765421 11333322211 0123467899
Q ss_pred CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc------------hHHHHHHHHHhHHHHHHHHHHHHhc-CCC
Q psy17489 112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF------------DEALQKAIRANLYATKQMLNLAKEC-VNL 171 (177)
Q Consensus 112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~------------~~~~~~~~~~nv~~~~~ll~~~~~~-~~~ 171 (177)
++++ ++++.++ .++|++|||||.... .++|+..+++|+.++..+.+.+... .+-
T Consensus 65 v~d~------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~ 138 (260)
T PRK06997 65 VASD------EQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDD 138 (260)
T ss_pred CCCH------HHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 9998 5565544 468999999987421 2467778999999999998887653 122
Q ss_pred CCcee
Q psy17489 172 KRFCE 176 (177)
Q Consensus 172 ~~~v~ 176 (177)
.++|+
T Consensus 139 g~Ii~ 143 (260)
T PRK06997 139 ASLLT 143 (260)
T ss_pred ceEEE
Confidence 35554
No 239
>KOG1208|consensus
Probab=99.30 E-value=1.7e-11 Score=96.65 Aligned_cols=121 Identities=18% Similarity=0.225 Sum_probs=88.5
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC-CCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK-GSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN 111 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D 111 (177)
.+.+++++||||+++||..+++.|...| .+|+...|+.. .+.+.+++.. .....++.++++|
T Consensus 32 ~~~~~~~vVTGansGIG~eta~~La~~G---a~Vv~~~R~~~~~~~~~~~i~~--------------~~~~~~i~~~~lD 94 (314)
T KOG1208|consen 32 DLSGKVALVTGATSGIGFETARELALRG---AHVVLACRNEERGEEAKEQIQK--------------GKANQKIRVIQLD 94 (314)
T ss_pred cCCCcEEEEECCCCchHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHHHHh--------------cCCCCceEEEECC
Confidence 4567999999999999999999999999 79999999862 2212222221 1123678899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-----hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCce
Q psy17489 112 LESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-----DEALQKAIRANLYATKQMLNLAK----ECVNLKRFC 175 (177)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-----~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v 175 (177)
+++. .++....+ ..|++|+|||+... .+..+..+.+|..|.+.+.+.+. .. ...|+|
T Consensus 95 Lssl------~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s-~~~RIV 167 (314)
T KOG1208|consen 95 LSSL------KSVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRS-APSRIV 167 (314)
T ss_pred CCCH------HHHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhC-CCCCEE
Confidence 9998 56655433 57999999998542 23466679999999888877654 33 336888
Q ss_pred eC
Q psy17489 176 EL 177 (177)
Q Consensus 176 ~v 177 (177)
+|
T Consensus 168 ~v 169 (314)
T KOG1208|consen 168 NV 169 (314)
T ss_pred EE
Confidence 75
No 240
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.30 E-value=3.1e-11 Score=92.07 Aligned_cols=115 Identities=14% Similarity=0.195 Sum_probs=79.8
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+++||||+|+||+++++.|++.| ++|++++|++. +.+..... ....++.++.+|+++.
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g---~~V~~~~r~~~-----~~~~~~~~------------~~~~~~~~~~~D~~~~- 60 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKG---THVISISRTEN-----KELTKLAE------------QYNSNLTFHSLDLQDV- 60 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcC---CEEEEEeCCch-----HHHHHHHh------------ccCCceEEEEecCCCH-
Confidence 689999999999999999999998 58898888652 11221111 0124688899999998
Q ss_pred CCCCHHHHHHHhcCC-----------cEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHh----cCCCCC
Q psy17489 117 LGLSEDSEQLIKSKV-----------NIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKE----CVNLKR 173 (177)
Q Consensus 117 ~~~~~~~~~~~~~~~-----------d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~ 173 (177)
+++..+++.+ .++||+||... ..+.+.+.+++|+.++..+++.+.. .++.++
T Consensus 61 -----~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 135 (251)
T PRK06924 61 -----HELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKR 135 (251)
T ss_pred -----HHHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCce
Confidence 5666655421 27999998642 1355677889999997777766543 223456
Q ss_pred ceeC
Q psy17489 174 FCEL 177 (177)
Q Consensus 174 ~v~v 177 (177)
||++
T Consensus 136 iv~~ 139 (251)
T PRK06924 136 VINI 139 (251)
T ss_pred EEEe
Confidence 7764
No 241
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.29 E-value=9.7e-11 Score=88.67 Aligned_cols=115 Identities=15% Similarity=0.157 Sum_probs=80.0
Q ss_pred EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489 39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG 118 (177)
Q Consensus 39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 118 (177)
++||||+|+||.++++.|.+.| .+|++++|+... .. +.+.+... ....++.++.+|+++.
T Consensus 1 vlItGas~giG~~~a~~l~~~G---~~v~~~~~~~~~-~~-~~~~~~l~------------~~~~~~~~~~~Dl~~~--- 60 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADG---FEICVHYHSGRS-DA-ESVVSAIQ------------AQGGNARLLQFDVADR--- 60 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCCHH-HH-HHHHHHHH------------HcCCeEEEEEccCCCH---
Confidence 5899999999999999999999 578888775421 11 11111111 0124688999999998
Q ss_pred CCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH-----hcCCCCCceeC
Q psy17489 119 LSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK-----ECVNLKRFCEL 177 (177)
Q Consensus 119 ~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~-----~~~~~~~~v~v 177 (177)
+++..+++ .+|.+||++|... ..++++.++++|+.++.++++.+. +. +..+||++
T Consensus 61 ---~~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~iv~v 134 (239)
T TIGR01831 61 ---VACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRAR-QGGRIITL 134 (239)
T ss_pred ---HHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc-CCeEEEEE
Confidence 55555433 5799999999642 245677889999999999988652 22 33566653
No 242
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.29 E-value=3e-11 Score=90.90 Aligned_cols=103 Identities=14% Similarity=0.155 Sum_probs=78.1
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+++++||||+|++|.++++.|++.| .+|++++|++... +.+.. ..++.++.+|+++.
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~-----------------~~~~~~~~~D~~d~ 57 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERG---WQVTATVRGPQQD---TALQA-----------------LPGVHIEKLDMNDP 57 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCC---CEEEEEeCCCcch---HHHHh-----------------ccccceEEcCCCCH
Confidence 3689999999999999999999999 5899999876432 11211 13567788999987
Q ss_pred CCCCCHHHHHHHhc-----CCcEEEEcCcccCc---------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 116 HLGLSEDSEQLIKS-----KVNIIFHCAASLRF---------DEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 116 ~~~~~~~~~~~~~~-----~~d~vi~~aa~~~~---------~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
++++.+++ ++|+|||+||.... .+++...+++|+.++..+.+.+..
T Consensus 58 ------~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 117 (225)
T PRK08177 58 ------ASLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLG 117 (225)
T ss_pred ------HHHHHHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHH
Confidence 55655544 58999999987421 245667789999999999888764
No 243
>PRK06484 short chain dehydrogenase; Validated
Probab=99.29 E-value=8.7e-11 Score=98.72 Aligned_cols=107 Identities=15% Similarity=0.198 Sum_probs=80.9
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
.++|+++||||+++||.++++.|.+.| ++|+.++|+.. .+.+.... ...++.++.+|++
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G---~~V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~D~~ 61 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAG---DQVVVADRNVE------RARERADS------------LGPDHHALAMDVS 61 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH------------hCCceeEEEeccC
Confidence 368899999999999999999999999 68998888652 22222111 1235678899999
Q ss_pred CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC---------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR---------FDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
++ +++..++ .++|++|||||... ..++++..+++|+.++..+++.+..
T Consensus 62 ~~------~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 125 (520)
T PRK06484 62 DE------AQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALR 125 (520)
T ss_pred CH------HHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 98 5555544 36899999998621 1356788999999999999888764
No 244
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.28 E-value=4.3e-11 Score=90.08 Aligned_cols=112 Identities=15% Similarity=0.147 Sum_probs=82.5
Q ss_pred EEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCCC
Q psy17489 40 LVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLGL 119 (177)
Q Consensus 40 lVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~ 119 (177)
+||||+|+||.++++.|++.| .+|++++|+.. ++...... + . ...++.++.+|+++.
T Consensus 1 lItGas~~iG~~~a~~l~~~G---~~v~~~~r~~~------~~~~~~~~-----~----~-~~~~~~~~~~Dl~~~---- 57 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEG---ARVTIASRSRD------RLAAAARA-----L----G-GGAPVRTAALDITDE---- 57 (230)
T ss_pred CeecCCChHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH-----H----h-cCCceEEEEccCCCH----
Confidence 599999999999999999999 58899888642 22221110 0 0 124678899999998
Q ss_pred CHHHHHHHhc---CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 120 SEDSEQLIKS---KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 120 ~~~~~~~~~~---~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+++..+++ ++|++||++|.... .+.++..+++|+.++.++.+..... +..+||++
T Consensus 58 --~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~g~iv~~ 122 (230)
T PRK07041 58 --AAVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIA-PGGSLTFV 122 (230)
T ss_pred --HHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhc-CCeEEEEE
Confidence 67777665 58999999997431 3567788999999999999965544 55677763
No 245
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.28 E-value=8.5e-11 Score=90.94 Aligned_cols=118 Identities=12% Similarity=0.149 Sum_probs=80.0
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+++||||+|+||.++++.|++.| ++|++++|++.. .++...+.... ....+.++.+|+.++
T Consensus 1 k~vlItGas~giG~~la~~la~~G---~~vv~~~r~~~~--~~~~~~~~~~~------------~~~~~~~~~~D~~~~- 62 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQG---AELFLTDRDADG--LAQTVADARAL------------GGTVPEHRALDISDY- 62 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH--HHHHHHHHHhc------------CCCcceEEEeeCCCH-
Confidence 479999999999999999999998 578888886421 11111111000 012345678999987
Q ss_pred CCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh----cCCCCCceeC
Q psy17489 117 LGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE----CVNLKRFCEL 177 (177)
Q Consensus 117 ~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~v 177 (177)
+.+..++ .++|++||++|... ..++++..+++|+.++..+++.+.. .+...+||++
T Consensus 63 -----~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~i 136 (272)
T PRK07832 63 -----DAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNV 136 (272)
T ss_pred -----HHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 4544433 35899999999642 2356677899999999999998743 1123466653
No 246
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.27 E-value=9.7e-11 Score=90.02 Aligned_cols=114 Identities=15% Similarity=0.190 Sum_probs=80.5
Q ss_pred ccCCCceEEEecCCc-chHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489 32 DFYRDGQILVTGGTG-FMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS 110 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G-~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 110 (177)
..+.+++++||||+| +||.++++.|++.| .+|++.+|+... .++ ..+.... .. ...++.++++
T Consensus 13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G---~~V~~~~~~~~~--~~~-~~~~~~~--------~~--~~~~~~~~~~ 76 (262)
T PRK07831 13 GLLAGKVVLVTAAAGTGIGSATARRALEEG---ARVVISDIHERR--LGE-TADELAA--------EL--GLGRVEAVVC 76 (262)
T ss_pred cccCCCEEEEECCCcccHHHHHHHHHHHcC---CEEEEEeCCHHH--HHH-HHHHHHH--------hc--CCceEEEEEc
Confidence 345689999999997 79999999999999 578888876421 111 1111110 00 0135788999
Q ss_pred CCCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 111 NLESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 111 D~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
|+++. +++..++ .++|++|||||... ..+.+...+++|+.++..+++.+..
T Consensus 77 Dl~~~------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 141 (262)
T PRK07831 77 DVTSE------AQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALR 141 (262)
T ss_pred cCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 99997 5555544 36899999999642 1356778899999999998887654
No 247
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.27 E-value=3.4e-11 Score=93.72 Aligned_cols=96 Identities=18% Similarity=0.210 Sum_probs=75.0
Q ss_pred eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCC
Q psy17489 38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHL 117 (177)
Q Consensus 38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 117 (177)
+|+||||+|++|++++++|++.| .+|++++|++.... ..++..+.+|+.|+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g---~~V~~~~R~~~~~~------------------------~~~~~~~~~d~~d~-- 51 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAAS---VPFLVASRSSSSSA------------------------GPNEKHVKFDWLDE-- 51 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCC---CcEEEEeCCCcccc------------------------CCCCccccccCCCH--
Confidence 48999999999999999999998 58999999864310 13566778899998
Q ss_pred CCCHHHHHHHh------cC-CcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 118 GLSEDSEQLIK------SK-VNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 118 ~~~~~~~~~~~------~~-~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+.+..++ ++ +|.++|+++..... .....+++++|++. +++||||+
T Consensus 52 ----~~l~~a~~~~~~~~g~~d~v~~~~~~~~~~----------~~~~~~~i~aa~~~-gv~~~V~~ 103 (285)
T TIGR03649 52 ----DTWDNPFSSDDGMEPEISAVYLVAPPIPDL----------APPMIKFIDFARSK-GVRRFVLL 103 (285)
T ss_pred ----HHHHHHHhcccCcCCceeEEEEeCCCCCCh----------hHHHHHHHHHHHHc-CCCEEEEe
Confidence 7888887 56 99999998753211 12345789999998 99999984
No 248
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.27 E-value=1.4e-10 Score=87.71 Aligned_cols=101 Identities=19% Similarity=0.334 Sum_probs=74.3
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+++||||+|+||++++++|++.|.. ..++...|+.... ....++.++++|+++.
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~-~~v~~~~~~~~~~-----------------------~~~~~~~~~~~Dls~~- 55 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPD-ATVHATYRHHKPD-----------------------FQHDNVQWHALDVTDE- 55 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCC-CEEEEEccCCccc-----------------------cccCceEEEEecCCCH-
Confidence 58999999999999999999998643 3565555543211 0125788899999997
Q ss_pred CCCCHHHHHHH---hcCCcEEEEcCcccCc-------------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 117 LGLSEDSEQLI---KSKVNIIFHCAASLRF-------------DEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 117 ~~~~~~~~~~~---~~~~d~vi~~aa~~~~-------------~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+.++.+ ++++|++|||||.... .+.+...+.+|+.++..+.+.+..
T Consensus 56 -----~~~~~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~ 117 (235)
T PRK09009 56 -----AEIKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTP 117 (235)
T ss_pred -----HHHHHHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 454443 4579999999997531 134567889999999988887754
No 249
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.27 E-value=1e-10 Score=92.87 Aligned_cols=126 Identities=15% Similarity=0.158 Sum_probs=81.6
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
.|+.++||||+|+||.++++.|++.| .+|++++|+++. . +.+.+.+.. .. ...++..+.+|+++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G---~~Vil~~R~~~~--l-~~~~~~l~~--------~~--~~~~~~~~~~Dl~~ 115 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKG---LNLVLVARNPDK--L-KDVSDSIQS--------KY--SKTQIKTVVVDFSG 115 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCC---CCEEEEECCHHH--H-HHHHHHHHH--------HC--CCcEEEEEEEECCC
Confidence 47899999999999999999999999 588999987521 1 111111110 00 01356778889985
Q ss_pred CCCCCCHHHHHHHhcC--CcEEEEcCcccC---------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489 115 EHLGLSEDSEQLIKSK--VNIIFHCAASLR---------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL 177 (177)
Q Consensus 115 ~~~~~~~~~~~~~~~~--~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v 177 (177)
. .....+.+.+.+++ +|++|||||... ..+.++..+++|+.++..+.+.+... .+..++|++
T Consensus 116 ~-~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~i 191 (320)
T PLN02780 116 D-IDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINI 191 (320)
T ss_pred C-cHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 2 10011223333443 569999999742 13456678999999999998886531 144566653
No 250
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.27 E-value=9.2e-11 Score=90.32 Aligned_cols=110 Identities=13% Similarity=0.121 Sum_probs=78.5
Q ss_pred cCCCceEEEecCCc--chHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489 33 FYRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS 110 (177)
Q Consensus 33 ~~~~~~vlVtG~~G--~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 110 (177)
.+++|+++||||++ +||.++++.|.+.| ++|+..+|++. .++.+.++... .....++++
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G---~~v~~~~r~~~---~~~~~~~l~~~-------------~g~~~~~~~ 65 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAKKHG---AELWFTYQSEV---LEKRVKPLAEE-------------IGCNFVSEL 65 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHHHcC---CEEEEEeCchH---HHHHHHHHHHh-------------cCCceEEEc
Confidence 45789999999997 89999999999999 57887776521 22233332211 012235789
Q ss_pred CCCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-----------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 111 NLESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-----------FDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 111 D~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-----------~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
|++++ ++++.++ .++|++|||||... ..+.|+..+++|+.++..+++.+..
T Consensus 66 Dv~~~------~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~ 134 (260)
T PRK06603 66 DVTNP------KSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEA 134 (260)
T ss_pred cCCCH------HHHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99998 5555544 36899999998642 1356778899999999999887653
No 251
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.27 E-value=1.2e-10 Score=89.49 Aligned_cols=116 Identities=17% Similarity=0.171 Sum_probs=77.5
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+++||||+|+||.++++.|++.| ++|++.+|++.. . +...+.+. ...++.++.+|+++.
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~l~-------------~~~~~~~~~~Dv~d~- 60 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKG---ARVVISSRNEEN--L-EKALKELK-------------EYGEVYAVKADLSDK- 60 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcC---CEEEEEeCCHHH--H-HHHHHHHH-------------hcCCceEEEcCCCCH-
Confidence 579999999999999999999999 588888886421 1 11111111 013577899999997
Q ss_pred CCCCHHHHHHHh-------cCCcEEEEcCcccC-----c----hHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCcee
Q psy17489 117 LGLSEDSEQLIK-------SKVNIIFHCAASLR-----F----DEALQKAIRANLYATKQMLNLA----KECVNLKRFCE 176 (177)
Q Consensus 117 ~~~~~~~~~~~~-------~~~d~vi~~aa~~~-----~----~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~ 176 (177)
+++..++ .++|++|||||... . .+++...+.+|+.++..+.+.+ .+..+..+||+
T Consensus 61 -----~~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~ 135 (259)
T PRK08340 61 -----DDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVY 135 (259)
T ss_pred -----HHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 5555544 36899999999642 1 2345566788888776665443 21113456776
Q ss_pred C
Q psy17489 177 L 177 (177)
Q Consensus 177 v 177 (177)
+
T Consensus 136 i 136 (259)
T PRK08340 136 L 136 (259)
T ss_pred E
Confidence 4
No 252
>PRK08324 short chain dehydrogenase; Validated
Probab=99.26 E-value=1.5e-10 Score=100.32 Aligned_cols=119 Identities=18% Similarity=0.138 Sum_probs=86.2
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+.+++++||||+|+||.++++.|.+.| .+|++++|+... . +.+..... .. .++.++.+|+
T Consensus 419 ~l~gk~vLVTGasggIG~~la~~L~~~G---a~Vvl~~r~~~~--~-~~~~~~l~------------~~-~~v~~v~~Dv 479 (681)
T PRK08324 419 PLAGKVALVTGAAGGIGKATAKRLAAEG---ACVVLADLDEEA--A-EAAAAELG------------GP-DRALGVACDV 479 (681)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCc---CEEEEEeCCHHH--H-HHHHHHHh------------cc-CcEEEEEecC
Confidence 3578999999999999999999999998 589999987521 1 11111111 01 3688899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh----cCCC-CC
Q psy17489 113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE----CVNL-KR 173 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~-~~ 173 (177)
++. +.+..+++ ++|+|||+||... ..+.++..+++|+.++..+++.+.+ . +. .+
T Consensus 480 td~------~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~~g~ 552 (681)
T PRK08324 480 TDE------AAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQ-GLGGS 552 (681)
T ss_pred CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCcE
Confidence 997 55555443 6899999999643 2356778899999999999777643 3 33 56
Q ss_pred ceeC
Q psy17489 174 FCEL 177 (177)
Q Consensus 174 ~v~v 177 (177)
||++
T Consensus 553 iV~v 556 (681)
T PRK08324 553 IVFI 556 (681)
T ss_pred EEEE
Confidence 7764
No 253
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.25 E-value=3.8e-11 Score=103.86 Aligned_cols=93 Identities=23% Similarity=0.183 Sum_probs=69.5
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
..|+|+||||+||||++|++.|.+.|+ .|.. ..+|++|
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~---~v~~---------------------------------------~~~~l~d 416 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGI---AYEY---------------------------------------GKGRLED 416 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCC---eEEe---------------------------------------ecccccc
Confidence 347899999999999999999998884 4321 1123444
Q ss_pred CCCCCCHHHHHHHhc--CCcEEEEcCcccC---c---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489 115 EHLGLSEDSEQLIKS--KVNIIFHCAASLR---F---DEALQKAIRANLYATKQMLNLAKECVNLKRFCE 176 (177)
Q Consensus 115 ~~~~~~~~~~~~~~~--~~d~vi~~aa~~~---~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~ 176 (177)
. +.+...+. ++|+|||+||.++ . ......++++|+.++.+++++|++. +++++++
T Consensus 417 ~------~~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~-g~~~v~~ 479 (668)
T PLN02260 417 R------SSLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN-GLLMMNF 479 (668)
T ss_pred H------HHHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc-CCeEEEE
Confidence 4 45555554 6899999999863 2 2345678899999999999999998 7865543
No 254
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.25 E-value=1.6e-10 Score=87.91 Aligned_cols=109 Identities=17% Similarity=0.236 Sum_probs=76.9
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+.+++++||||+|+||.++++.|.+.| .+|++++|+.. ++...... + .....++.++++|++
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G---~~vi~~~r~~~------~~~~~~~~-----~----~~~~~~~~~~~~D~~ 64 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKG---AKLALIDLNQE------KLEEAVAE-----C----GALGTEVRGYAANVT 64 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH-----H----HhcCCceEEEEcCCC
Confidence 468899999999999999999999998 57888888642 11111110 0 001246788999999
Q ss_pred CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC----------------chHHHHHHHHHhHHHHHHHHHHHH
Q psy17489 114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR----------------FDEALQKAIRANLYATKQMLNLAK 166 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~----------------~~~~~~~~~~~nv~~~~~ll~~~~ 166 (177)
+. +++..++ .++|+|||+||... ..+.+...+++|+.++..+.+.+.
T Consensus 65 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 134 (253)
T PRK08217 65 DE------EDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAA 134 (253)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 87 4444433 35799999999532 124566788999999988876544
No 255
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.24 E-value=2.9e-10 Score=98.46 Aligned_cols=123 Identities=14% Similarity=0.053 Sum_probs=84.5
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+.+|+++||||+|+||+++++.|++.| ++|++++|+... . +.+.+.+.. . . ...++..+.+|+
T Consensus 411 ~l~gkvvLVTGasggIG~aiA~~La~~G---a~Vvi~~r~~~~--~-~~~~~~l~~----~----~--~~~~~~~v~~Dv 474 (676)
T TIGR02632 411 TLARRVAFVTGGAGGIGRETARRLAAEG---AHVVLADLNLEA--A-EAVAAEING----Q----F--GAGRAVALKMDV 474 (676)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCC---CEEEEEeCCHHH--H-HHHHHHHHh----h----c--CCCcEEEEECCC
Confidence 4578999999999999999999999999 589998886421 1 111111110 0 0 113567889999
Q ss_pred CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCc
Q psy17489 113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAK----ECVNLKRF 174 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~ 174 (177)
++. +++..+++ ++|++|||||.... .+.|+..+++|+.+...+.+.+. +.+.-.+|
T Consensus 475 td~------~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~I 548 (676)
T TIGR02632 475 TDE------QAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNI 548 (676)
T ss_pred CCH------HHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 998 56666554 68999999997431 35677789999999888765543 22112367
Q ss_pred eeC
Q psy17489 175 CEL 177 (177)
Q Consensus 175 v~v 177 (177)
||+
T Consensus 549 V~i 551 (676)
T TIGR02632 549 VFI 551 (676)
T ss_pred EEE
Confidence 663
No 256
>KOG4169|consensus
Probab=99.24 E-value=2.7e-11 Score=89.78 Aligned_cols=109 Identities=17% Similarity=0.243 Sum_probs=79.1
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
++||++++|||.|+||..+++.|++.| ..+.++.-+.+..+...++... ....++.|+++|++
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~kg---ik~~~i~~~~En~~a~akL~ai--------------~p~~~v~F~~~DVt 65 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEKG---IKVLVIDDSEENPEAIAKLQAI--------------NPSVSVIFIKCDVT 65 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHcC---chheeehhhhhCHHHHHHHhcc--------------CCCceEEEEEeccc
Confidence 569999999999999999999999998 3444444433332222222221 12367899999999
Q ss_pred CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHH
Q psy17489 114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAK 166 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~ 166 (177)
+. .+++++++ .+|++||+||+.. ..+|+..+.+|+.+..+-...+.
T Consensus 66 ~~------~~~~~~f~ki~~~fg~iDIlINgAGi~~-dkd~e~Ti~vNLtgvin~T~~al 118 (261)
T KOG4169|consen 66 NR------GDLEAAFDKILATFGTIDILINGAGILD-DKDWERTINVNLTGVINGTQLAL 118 (261)
T ss_pred cH------HHHHHHHHHHHHHhCceEEEEccccccc-chhHHHhhccchhhhhhhhhhhh
Confidence 96 56666544 6899999999865 67899999999998766655543
No 257
>KOG0747|consensus
Probab=99.24 E-value=9.3e-12 Score=94.92 Aligned_cols=119 Identities=18% Similarity=0.314 Sum_probs=89.5
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
+.++||||.||||++.+..+... |.-.+.+.++.-.-... ...++.. .+.++.+++.+|+.+.
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~-~p~~~~v~idkL~~~s~-~~~l~~~--------------~n~p~ykfv~~di~~~- 69 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDK-YPDYKFVNLDKLDYCSN-LKNLEPV--------------RNSPNYKFVEGDIADA- 69 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccC-CCCCcEEEEeecccccc-cchhhhh--------------ccCCCceEeeccccch-
Confidence 78999999999999999999987 44456776665432211 0111110 1347899999999998
Q ss_pred CCCCHHHHHHHhc--CCcEEEEcCcccCchHHH---HHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 117 LGLSEDSEQLIKS--KVNIIFHCAASLRFDEAL---QKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~~~~~---~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
..+...+. .+|.|+|.|+.+++...+ -+..+.|+.++..|++.++..+++++||||
T Consensus 70 -----~~~~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhv 130 (331)
T KOG0747|consen 70 -----DLVLYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHV 130 (331)
T ss_pred -----HHHHhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEe
Confidence 45555554 799999999998765443 245788999999999999999999999996
No 258
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.22 E-value=1.7e-10 Score=87.15 Aligned_cols=109 Identities=12% Similarity=0.148 Sum_probs=78.6
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+.+++++||||+|+||.++++.|.+.| .+|++++|++... +.+..... ...++.++.+|+.
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G---~~V~~~~r~~~~~---~~~~~~~~-------------~~~~~~~~~~Dl~ 63 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEG---AQVCINSRNENKL---KRMKKTLS-------------KYGNIHYVVGDVS 63 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHHH-------------hcCCeEEEECCCC
Confidence 467899999999999999999999999 5899999865211 11211111 1136788999999
Q ss_pred CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-----chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-----FDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-----~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+. +++..++ ..+|.+||+++... ..+.++..++.|+.+...+++.+.+
T Consensus 64 ~~------~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 123 (238)
T PRK05786 64 ST------ESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLR 123 (238)
T ss_pred CH------HHHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 97 5555443 35799999998532 1244566789999998888887765
No 259
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.22 E-value=3.9e-10 Score=85.31 Aligned_cols=109 Identities=10% Similarity=0.098 Sum_probs=75.9
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++++++||||+++||.++++.|.+.| .+|++.+|+.. ..++..++... ...++..+.+|+.
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G---~~V~~~~r~~~--~l~~~~~~i~~-------------~~~~~~~~~~D~~ 64 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLG---ATLILCDQDQS--ALKDTYEQCSA-------------LTDNVYSFQLKDF 64 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCC---CEEEEEcCCHH--HHHHHHHHHHh-------------cCCCeEEEEccCC
Confidence 468999999999999999999999999 58888888652 11111111111 1245677889999
Q ss_pred CCCCCCCHHHHHHH-------hc-CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHH
Q psy17489 114 SEHLGLSEDSEQLI-------KS-KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAK 166 (177)
Q Consensus 114 ~~~~~~~~~~~~~~-------~~-~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~ 166 (177)
++ ++++.+ +. ++|++|||||... ..+.+.+.+++|+.++..+.+.+.
T Consensus 65 ~~------~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (227)
T PRK08862 65 SQ------ESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAA 127 (227)
T ss_pred CH------HHHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 87 455443 34 6899999997432 124566677889888887766543
No 260
>KOG2865|consensus
Probab=99.21 E-value=6.4e-11 Score=90.60 Aligned_cols=116 Identities=18% Similarity=0.288 Sum_probs=91.8
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
.|-.+-|.||+||+|..++.+|.+.| .+|++..|.++..- .++ + ...+...+-++..|+.|
T Consensus 60 sGiVaTVFGAtGFlGryvvnklak~G---SQviiPyR~d~~~~-----r~l-------k----vmGdLGQvl~~~fd~~D 120 (391)
T KOG2865|consen 60 SGIVATVFGATGFLGRYVVNKLAKMG---SQVIIPYRGDEYDP-----RHL-------K----VMGDLGQVLFMKFDLRD 120 (391)
T ss_pred cceEEEEecccccccHHHHHHHhhcC---CeEEEeccCCccch-----hhe-------e----ecccccceeeeccCCCC
Confidence 45568999999999999999999999 79999988764321 111 0 11234678899999999
Q ss_pred CCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 115 EHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+ ++++.+++..++|||+.|---..+.+ .+.++|+.++..|++.|++. ++.|||++
T Consensus 121 e------dSIr~vvk~sNVVINLIGrd~eTknf-~f~Dvn~~~aerlAricke~-GVerfIhv 175 (391)
T KOG2865|consen 121 E------DSIRAVVKHSNVVINLIGRDYETKNF-SFEDVNVHIAERLARICKEA-GVERFIHV 175 (391)
T ss_pred H------HHHHHHHHhCcEEEEeeccccccCCc-ccccccchHHHHHHHHHHhh-Chhheeeh
Confidence 8 89999999999999999852222222 35689999999999999998 99999985
No 261
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=99.21 E-value=9.4e-11 Score=90.46 Aligned_cols=93 Identities=19% Similarity=0.245 Sum_probs=75.0
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+++|||++|.+|..|++.|. .+ ..|+.++|.+ .|++++
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~---~~v~a~~~~~------------------------------------~Ditd~- 39 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GE---FEVIATDRAE------------------------------------LDITDP- 39 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CC---ceEEeccCcc------------------------------------ccccCh-
Confidence 349999999999999999998 33 4788776631 688888
Q ss_pred CCCCHHHHHHHhc--CCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 117 LGLSEDSEQLIKS--KVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+.+..++. +.|+|||+|+++.+. ...+..+.+|..++.+++++|++. +. ++||+
T Consensus 40 -----~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~-ga-~lVhi 98 (281)
T COG1091 40 -----DAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEV-GA-RLVHI 98 (281)
T ss_pred -----HHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHh-CC-eEEEe
Confidence 77888887 579999999998653 345678999999999999999998 44 56653
No 262
>KOG0725|consensus
Probab=99.19 E-value=6.8e-10 Score=86.10 Aligned_cols=115 Identities=21% Similarity=0.249 Sum_probs=82.1
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN 111 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D 111 (177)
..+.+|+++||||+.+||++++..|.+.| ++|+..+|+.+.. ++....+.. ......++..+.+|
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~G---a~v~i~~r~~~~~--~~~~~~~~~----------~~~~~~~~~~~~~D 68 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKAG---AKVVITGRSEERL--EETAQELGG----------LGYTGGKVLAIVCD 68 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH--HHHHHHHHh----------cCCCCCeeEEEECc
Confidence 45789999999999999999999999999 7999999976321 111111111 00113568889999
Q ss_pred CCCCCCCCCHHHHHHH--------hcCCcEEEEcCcccCc--------hHHHHHHHHHhHHH-HHHHHHHHHh
Q psy17489 112 LESEHLGLSEDSEQLI--------KSKVNIIFHCAASLRF--------DEALQKAIRANLYA-TKQMLNLAKE 167 (177)
Q Consensus 112 ~~~~~~~~~~~~~~~~--------~~~~d~vi~~aa~~~~--------~~~~~~~~~~nv~~-~~~ll~~~~~ 167 (177)
+++. +..+.+ +.++|+++||||.... .+.|+..+++|+.| ...+.+.+..
T Consensus 69 v~~~------~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~ 135 (270)
T KOG0725|consen 69 VSKE------VDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARP 135 (270)
T ss_pred CCCH------HHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHH
Confidence 9987 333332 4479999999997542 46788899999995 6666665544
No 263
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=99.18 E-value=1.8e-10 Score=87.22 Aligned_cols=100 Identities=24% Similarity=0.372 Sum_probs=75.6
Q ss_pred EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489 39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG 118 (177)
Q Consensus 39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 118 (177)
|+|+||+|.+|+++++.|++.+ .+|.++.|+... +...++.. ..++.+.+|+.+.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~---~~V~~l~R~~~~----~~~~~l~~---------------~g~~vv~~d~~~~--- 55 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAG---FSVRALVRDPSS----DRAQQLQA---------------LGAEVVEADYDDP--- 55 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT---GCEEEEESSSHH----HHHHHHHH---------------TTTEEEES-TT-H---
T ss_pred CEEECCccHHHHHHHHHHHhCC---CCcEEEEeccch----hhhhhhhc---------------ccceEeecccCCH---
Confidence 7999999999999999999977 689999997621 22222211 4567889999988
Q ss_pred CCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489 119 LSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCE 176 (177)
Q Consensus 119 ~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~ 176 (177)
+.+.++++++|.||.+-+..... -+....+++++|++. ++++||+
T Consensus 56 ---~~l~~al~g~d~v~~~~~~~~~~---------~~~~~~~li~Aa~~a-gVk~~v~ 100 (233)
T PF05368_consen 56 ---ESLVAALKGVDAVFSVTPPSHPS---------ELEQQKNLIDAAKAA-GVKHFVP 100 (233)
T ss_dssp ---HHHHHHHTTCSEEEEESSCSCCC---------HHHHHHHHHHHHHHH-T-SEEEE
T ss_pred ---HHHHHHHcCCceEEeecCcchhh---------hhhhhhhHHHhhhcc-ccceEEE
Confidence 89999999999999998864311 123445799999999 8999986
No 264
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.17 E-value=2.3e-10 Score=88.25 Aligned_cols=113 Identities=11% Similarity=0.082 Sum_probs=73.6
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
++++||||+|+||.++++.|++.| .+|+++.|+.. ... +.+.+.+.. ....++.++.+|+++..
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G---~~V~~~~~~~~-~~~-~~~~~~l~~-----------~~~~~~~~~~~Dv~d~~ 65 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEG---YRVVLHYHRSA-AAA-STLAAELNA-----------RRPNSAVTCQADLSNSA 65 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCC---CeEEEEcCCcH-HHH-HHHHHHHHh-----------ccCCceEEEEccCCCch
Confidence 479999999999999999999999 57887766431 111 111111110 01135667899999973
Q ss_pred CCCCHHHHHHH-------hcCCcEEEEcCcccCc--------h----------HHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 117 LGLSEDSEQLI-------KSKVNIIFHCAASLRF--------D----------EALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 117 ~~~~~~~~~~~-------~~~~d~vi~~aa~~~~--------~----------~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
.- .+.++.+ +.++|+||||||.... . ..+.+.+++|+.++..+.+.+..
T Consensus 66 ~~--~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 139 (267)
T TIGR02685 66 TL--FSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQ 139 (267)
T ss_pred hh--HHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 00 0011222 2468999999996421 1 13667899999999999887653
No 265
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.17 E-value=5.8e-10 Score=82.33 Aligned_cols=89 Identities=18% Similarity=0.361 Sum_probs=71.4
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+++||||+|+||.++++.|.+. .+|+..+|+.. .+++|+++.
T Consensus 1 ~~vlItGas~giG~~la~~l~~~----~~vi~~~r~~~--------------------------------~~~~D~~~~- 43 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR----HEVITAGRSSG--------------------------------DVQVDITDP- 43 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc----CcEEEEecCCC--------------------------------ceEecCCCh-
Confidence 47999999999999999999876 47888887531 357899987
Q ss_pred CCCCHHHHHHHhc---CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 117 LGLSEDSEQLIKS---KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 117 ~~~~~~~~~~~~~---~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
++++.+++ ++|++||+||.... .+++.+.+++|+.++.++.+.+.+
T Consensus 44 -----~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 99 (199)
T PRK07578 44 -----ASIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQH 99 (199)
T ss_pred -----HHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666655 68999999996431 356777899999999999998765
No 266
>KOG1611|consensus
Probab=99.16 E-value=3.4e-10 Score=83.95 Aligned_cols=114 Identities=15% Similarity=0.195 Sum_probs=77.5
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
.+.++||||+++||..|+++|++. .++..++...|+.+.. .+++.... -..++++.++.|++++
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~-~~i~~iiat~r~~e~a--~~~l~~k~-------------~~d~rvHii~Ldvt~d 66 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKD-KGIEVIIATARDPEKA--ATELALKS-------------KSDSRVHIIQLDVTCD 66 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcC-CCcEEEEEecCChHHh--hHHHHHhh-------------ccCCceEEEEEecccH
Confidence 467999999999999999999986 4666667766755322 22222211 1347999999999998
Q ss_pred C-CCCCHHHHHHH--hcCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHH
Q psy17489 116 H-LGLSEDSEQLI--KSKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLA 165 (177)
Q Consensus 116 ~-~~~~~~~~~~~--~~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~ 165 (177)
. ++..-.+++++ .+++|.+|+|||+.. ....|...+++|+.++..+.+.+
T Consensus 67 eS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~ 127 (249)
T KOG1611|consen 67 ESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAF 127 (249)
T ss_pred HHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHH
Confidence 2 21111222223 236799999999742 13456778899999988877653
No 267
>PLN00016 RNA-binding protein; Provisional
Probab=99.16 E-value=2.2e-10 Score=92.81 Aligned_cols=110 Identities=18% Similarity=0.344 Sum_probs=73.6
Q ss_pred CCCceEEEe----cCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEe
Q psy17489 34 YRDGQILVT----GGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP 109 (177)
Q Consensus 34 ~~~~~vlVt----G~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 109 (177)
...++|+|| ||+||||+++++.|++.| ++|++++|+.... ..+... ....+.+ . ....++++.
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G---~~V~~l~R~~~~~---~~~~~~----~~~~~~~-l--~~~~v~~v~ 116 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAG---HEVTLFTRGKEPS---QKMKKE----PFSRFSE-L--SSAGVKTVW 116 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCC---CEEEEEecCCcch---hhhccC----chhhhhH-h--hhcCceEEE
Confidence 345789999 999999999999999999 5899999976321 111000 0000000 0 013478889
Q ss_pred CCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 110 SNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 110 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+|+.+. +.+. ...++|+|||+++. ++.++.+++++|++. +++||||+
T Consensus 117 ~D~~d~------~~~~-~~~~~d~Vi~~~~~-------------~~~~~~~ll~aa~~~-gvkr~V~~ 163 (378)
T PLN00016 117 GDPADV------KSKV-AGAGFDVVYDNNGK-------------DLDEVEPVADWAKSP-GLKQFLFC 163 (378)
T ss_pred ecHHHH------Hhhh-ccCCccEEEeCCCC-------------CHHHHHHHHHHHHHc-CCCEEEEE
Confidence 988763 2221 12478999999763 134567899999998 89999984
No 268
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.15 E-value=7.9e-10 Score=84.78 Aligned_cols=108 Identities=15% Similarity=0.175 Sum_probs=74.2
Q ss_pred eEEEecCCcchHHHHHHHHHh----hCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 38 QILVTGGTGFMGKLLIDKLLR----SFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 38 ~vlVtG~~G~iG~~l~~~L~~----~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
.++||||+++||.+++++|++ .| .+|+.++|+... . +.+.+.+. .. ....++.++.+|++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g---~~V~~~~r~~~~--~-~~~~~~l~--------~~--~~~~~v~~~~~Dl~ 65 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPG---SVLVLSARNDEA--L-RQLKAEIG--------AE--RSGLRVVRVSLDLG 65 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCC---cEEEEEEcCHHH--H-HHHHHHHH--------hc--CCCceEEEEEeccC
Confidence 589999999999999999997 57 588888886521 1 11111111 00 01236788999999
Q ss_pred CCCCCCCHHHHHHHhcC-----------CcEEEEcCcccCc----------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 114 SEHLGLSEDSEQLIKSK-----------VNIIFHCAASLRF----------DEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~~-----------~d~vi~~aa~~~~----------~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+. +++..+++. .+++|||||.... .+.++..+++|+.++..+.+.+.+
T Consensus 66 ~~------~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~ 134 (256)
T TIGR01500 66 AE------AGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLK 134 (256)
T ss_pred CH------HHHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 98 556554431 2589999996321 245677899999999888877644
No 269
>PLN00015 protochlorophyllide reductase
Probab=99.15 E-value=1e-09 Score=86.63 Aligned_cols=115 Identities=16% Similarity=0.137 Sum_probs=78.6
Q ss_pred EEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCCC
Q psy17489 40 LVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLGL 119 (177)
Q Consensus 40 lVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~ 119 (177)
+||||+++||.++++.|++.|. ++|++.+|+.. ........ + .....++.++.+|+.+.
T Consensus 1 lITGas~GIG~aia~~l~~~G~--~~V~~~~r~~~------~~~~~~~~-----l----~~~~~~~~~~~~Dl~d~---- 59 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGK--WHVVMACRDFL------KAERAAKS-----A----GMPKDSYTVMHLDLASL---- 59 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCC--CEEEEEeCCHH------HHHHHHHH-----h----cCCCCeEEEEEecCCCH----
Confidence 5999999999999999999982 37888887642 11111110 0 00124678889999998
Q ss_pred CHHHHHHHh-------cCCcEEEEcCcccCc--------hHHHHHHHHHhHHHHHHHHHHHHhc---CC--CCCceeC
Q psy17489 120 SEDSEQLIK-------SKVNIIFHCAASLRF--------DEALQKAIRANLYATKQMLNLAKEC---VN--LKRFCEL 177 (177)
Q Consensus 120 ~~~~~~~~~-------~~~d~vi~~aa~~~~--------~~~~~~~~~~nv~~~~~ll~~~~~~---~~--~~~~v~v 177 (177)
++++.++ .++|++|||||.... .+.++..+++|+.++..+++.+... .+ ..++|+|
T Consensus 60 --~~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~v 135 (308)
T PLN00015 60 --DSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIV 135 (308)
T ss_pred --HHHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 5555543 358999999997421 3567788999999998887765432 12 3577764
No 270
>KOG1200|consensus
Probab=99.12 E-value=3.9e-10 Score=81.93 Aligned_cols=118 Identities=14% Similarity=0.187 Sum_probs=84.8
Q ss_pred cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489 31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS 110 (177)
Q Consensus 31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 110 (177)
.+++..+.++||||+++||+++++.|.+.| ++|.+.+++.. .+++...++ +.. .+-..+.+
T Consensus 9 ~~r~~sk~~~vtGg~sGIGrAia~~la~~G---arv~v~dl~~~--~A~ata~~L-------------~g~-~~h~aF~~ 69 (256)
T KOG1200|consen 9 VQRLMSKVAAVTGGSSGIGRAIAQLLAKKG---ARVAVADLDSA--AAEATAGDL-------------GGY-GDHSAFSC 69 (256)
T ss_pred HHHHhcceeEEecCCchHHHHHHHHHHhcC---cEEEEeecchh--hHHHHHhhc-------------CCC-Cccceeee
Confidence 345677899999999999999999999999 68888887653 222222221 111 24556789
Q ss_pred CCCCCC-CCCCHHHHHHHhcCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 111 NLESEH-LGLSEDSEQLIKSKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 111 D~~~~~-~~~~~~~~~~~~~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
|+++.. .....+.+.+-+..+++++||||++. ..++|+..+.+|+.+.+...+++.+
T Consensus 70 DVS~a~~v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r 134 (256)
T KOG1200|consen 70 DVSKAHDVQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVR 134 (256)
T ss_pred ccCcHHHHHHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHH
Confidence 999973 11112233333447899999999975 2578999999999999999887755
No 271
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.12 E-value=2.1e-10 Score=87.68 Aligned_cols=113 Identities=16% Similarity=0.167 Sum_probs=85.8
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+|++||||-+|.-|+.|++.|++.| ..|+.+.|+...... .++ +++...+. ...++.++.+|++|.
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekG---Y~VhGi~Rrss~~n~-~ri-~L~~~~~~---------~~~~l~l~~gDLtD~ 67 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKG---YEVHGIKRRSSSFNT-PRI-HLYEDPHL---------NDPRLHLHYGDLTDS 67 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcC---cEEEEEeeccccCCc-ccc-eecccccc---------CCceeEEEeccccch
Confidence 6899999999999999999999999 588999887533222 222 33322111 235688999999998
Q ss_pred CCCCCHHHHHHHhc--CCcEEEEcCcccCchHHHH---HHHHHhHHHHHHHHHHHHhc
Q psy17489 116 HLGLSEDSEQLIKS--KVNIIFHCAASLRFDEALQ---KAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 116 ~~~~~~~~~~~~~~--~~d~vi~~aa~~~~~~~~~---~~~~~nv~~~~~ll~~~~~~ 168 (177)
..+.++++ +.|-|+|+||+..+..+++ ...+++..|+.+|+++.+..
T Consensus 68 ------~~l~r~l~~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~ 119 (345)
T COG1089 68 ------SNLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRIL 119 (345)
T ss_pred ------HHHHHHHHhcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHh
Confidence 67777776 5799999999876544443 45688899999999999986
No 272
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=99.11 E-value=2.6e-09 Score=84.19 Aligned_cols=127 Identities=17% Similarity=0.121 Sum_probs=76.0
Q ss_pred CCCceEEEecC--CcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcc-cCCCeEEEeC
Q psy17489 34 YRDGQILVTGG--TGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPD-FRSKIQVIPS 110 (177)
Q Consensus 34 ~~~~~vlVtG~--~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~ 110 (177)
++||+++|||| +++||.++++.|.+.| .+|++ +|+.... +.+........++.+..+... .......+.+
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~G---a~Vv~-~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAG---AEILV-GTWVPAL---NIFETSLRRGKFDESRKLPDGSLMEITKVYPL 79 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCC---CEEEE-EeCcchh---hHHHHhhhccccchhhhcccccccCcCeeeec
Confidence 78999999999 7999999999999999 68877 6643221 222211111011111000000 0012356778
Q ss_pred CC--CCCC-CCC-----------CHHHHHHH-------hcCCcEEEEcCcccC---------chHHHHHHHHHhHHHHHH
Q psy17489 111 NL--ESEH-LGL-----------SEDSEQLI-------KSKVNIIFHCAASLR---------FDEALQKAIRANLYATKQ 160 (177)
Q Consensus 111 D~--~~~~-~~~-----------~~~~~~~~-------~~~~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~~ 160 (177)
|+ .+.. +.. ..++++.+ +.++|++|||||... ..++|+..+++|+.++..
T Consensus 80 D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~ 159 (303)
T PLN02730 80 DAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVS 159 (303)
T ss_pred ceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHH
Confidence 88 3221 000 00133333 336899999996421 136788899999999999
Q ss_pred HHHHHHh
Q psy17489 161 MLNLAKE 167 (177)
Q Consensus 161 ll~~~~~ 167 (177)
+.+.+..
T Consensus 160 l~~~~~p 166 (303)
T PLN02730 160 LLQHFGP 166 (303)
T ss_pred HHHHHHH
Confidence 9888765
No 273
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.11 E-value=6.5e-10 Score=106.45 Aligned_cols=135 Identities=14% Similarity=0.084 Sum_probs=90.0
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCC--------hHHHHHHHHhhh----------------
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS--------PEERVKNMLNSV---------------- 89 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~--------~~~~~~~~~~~~---------------- 89 (177)
..+++++||||+++||..+++.|.+.|- ++|++++|+..... -+..++......
T Consensus 1995 ~~g~vvLVTGGarGIG~aiA~~LA~~~g--a~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~ 2072 (2582)
T TIGR02813 1995 NSDDVFLVTGGAKGVTFECALELAKQCQ--AHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDAL 2072 (2582)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHhcC--CEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhc
Confidence 4688999999999999999999998731 68999998731000 001111100000
Q ss_pred --------hhhcccccCcccCCCeEEEeCCCCCCCCCCCHHHHHHHhc------CCcEEEEcCcccC-------chHHHH
Q psy17489 90 --------IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKS------KVNIIFHCAASLR-------FDEALQ 148 (177)
Q Consensus 90 --------~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~------~~d~vi~~aa~~~-------~~~~~~ 148 (177)
-......+......++.++.+|++|. +.+..+++ ++|+|||+||... ..+.|+
T Consensus 2073 ~~~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~------~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~ 2146 (2582)
T TIGR02813 2073 VRPVLSSLEIAQALAAFKAAGASAEYASADVTNS------VSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFN 2146 (2582)
T ss_pred ccccchhHHHHHHHHHHHhcCCcEEEEEccCCCH------HHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHH
Confidence 00000000111245688999999998 56655543 5899999999753 246788
Q ss_pred HHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 149 KAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 149 ~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
..+++|+.|+.++++++... ..++||++
T Consensus 2147 ~v~~~nv~G~~~Ll~al~~~-~~~~IV~~ 2174 (2582)
T TIGR02813 2147 AVYGTKVDGLLSLLAALNAE-NIKLLALF 2174 (2582)
T ss_pred HHHHHHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 89999999999999999876 56677753
No 274
>PRK05599 hypothetical protein; Provisional
Probab=99.09 E-value=3.1e-09 Score=81.18 Aligned_cols=105 Identities=13% Similarity=0.159 Sum_probs=70.2
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+++||||+++||.++++.|.+ | .+|++.+|+++. .++ +.+.+.. ....++.++.+|+.+.
T Consensus 1 ~~vlItGas~GIG~aia~~l~~-g---~~Vil~~r~~~~--~~~-~~~~l~~-----------~~~~~~~~~~~Dv~d~- 61 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLCH-G---EDVVLAARRPEA--AQG-LASDLRQ-----------RGATSVHVLSFDAQDL- 61 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHhC-C---CEEEEEeCCHHH--HHH-HHHHHHh-----------ccCCceEEEEcccCCH-
Confidence 5799999999999999999984 7 688988886521 111 1111110 0112477899999998
Q ss_pred CCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHH
Q psy17489 117 LGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLA 165 (177)
Q Consensus 117 ~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~ 165 (177)
++++.++ +++|++|||||.... ...+.+.+.+|+.+...+++.+
T Consensus 62 -----~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 119 (246)
T PRK05599 62 -----DTHRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVL 119 (246)
T ss_pred -----HHHHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHH
Confidence 4444432 468999999997532 1223456778888887666554
No 275
>KOG1207|consensus
Probab=99.07 E-value=2e-10 Score=82.13 Aligned_cols=110 Identities=15% Similarity=0.167 Sum_probs=85.0
Q ss_pred cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489 31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS 110 (177)
Q Consensus 31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 110 (177)
+..++|+.+++||+..+||+.+++.|.+.| .+|++++|++ +.+..+.+. +..-+..+.+
T Consensus 2 ~t~laG~~vlvTgagaGIG~~~v~~La~aG---A~ViAvaR~~------a~L~sLV~e------------~p~~I~Pi~~ 60 (245)
T KOG1207|consen 2 KTSLAGVIVLVTGAGAGIGKEIVLSLAKAG---AQVIAVARNE------ANLLSLVKE------------TPSLIIPIVG 60 (245)
T ss_pred cccccceEEEeecccccccHHHHHHHHhcC---CEEEEEecCH------HHHHHHHhh------------CCcceeeeEe
Confidence 445789999999999999999999999999 7999999976 333333321 2344788999
Q ss_pred CCCCCCCCCCHHHHHHHhc---CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 111 NLESEHLGLSEDSEQLIKS---KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 111 D~~~~~~~~~~~~~~~~~~---~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
|+... +.+.+.+. .+|.++||||..-. .++++..|++|+.+..++.+...+
T Consensus 61 Dls~w------ea~~~~l~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var 121 (245)
T KOG1207|consen 61 DLSAW------EALFKLLVPVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVAR 121 (245)
T ss_pred cccHH------HHHHHhhcccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHH
Confidence 99885 66666654 47999999997531 356677789999999998887544
No 276
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=99.06 E-value=6.5e-09 Score=79.19 Aligned_cols=113 Identities=16% Similarity=0.251 Sum_probs=78.9
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccC-CCeEEEeCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFR-SKIQVIPSN 111 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~D 111 (177)
.+.+++++||||+++||..+++.|.+.| ..|++..++.... ..+.+...... .. ..+.+..+|
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G---~~v~~~~~~~~~~-~~~~~~~~~~~------------~~~~~~~~~~~D 65 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREG---ARVVVAARRSEEE-AAEALAAAIKE------------AGGGRAAAVAAD 65 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CeEEEEcCCCchh-hHHHHHHHHHh------------cCCCcEEEEEec
Confidence 3568999999999999999999999998 5777777765321 11222211110 01 357778899
Q ss_pred CCC-CCCCCCHHHHHHH-------hcCCcEEEEcCcccC----c----hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 112 LES-EHLGLSEDSEQLI-------KSKVNIIFHCAASLR----F----DEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 112 ~~~-~~~~~~~~~~~~~-------~~~~d~vi~~aa~~~----~----~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+++ . +.+..+ +.++|++|||||... . .+.++..+++|+.+...+.+.+..
T Consensus 66 vs~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~ 131 (251)
T COG1028 66 VSDDE------ESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALP 131 (251)
T ss_pred CCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 997 5 344433 335899999999743 1 367788999999999999885544
No 277
>KOG1610|consensus
Probab=98.98 E-value=1.3e-08 Score=79.11 Aligned_cols=118 Identities=17% Similarity=0.197 Sum_probs=84.9
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
..+|.|+|||+..+.|..++++|.+.| -.|++-...+.+. +.+.. +.. .++...++.|++
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~G---f~V~Agcl~~~ga---e~L~~------------~~~--s~rl~t~~LDVT 86 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKG---FRVFAGCLTEEGA---ESLRG------------ETK--SPRLRTLQLDVT 86 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcC---CEEEEEeecCchH---HHHhh------------hhc--CCcceeEeeccC
Confidence 457889999999999999999999999 4788777544321 22221 111 367888899999
Q ss_pred CCCCCCCHHHHHHHhc---------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc--CCCCCc
Q psy17489 114 SEHLGLSEDSEQLIKS---------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC--VNLKRF 174 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~---------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~ 174 (177)
++ ++++++.+ +...||||||+.. ..+++...+++|+.|+.++.+..... +.-.|+
T Consensus 87 ~~------esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRv 160 (322)
T KOG1610|consen 87 KP------ESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRV 160 (322)
T ss_pred CH------HHHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeE
Confidence 99 67777643 4689999999653 24677788999999988887765321 133466
Q ss_pred eeC
Q psy17489 175 CEL 177 (177)
Q Consensus 175 v~v 177 (177)
|+|
T Consensus 161 Vnv 163 (322)
T KOG1610|consen 161 VNV 163 (322)
T ss_pred EEe
Confidence 654
No 278
>PRK06720 hypothetical protein; Provisional
Probab=98.94 E-value=1.9e-08 Score=72.82 Aligned_cols=85 Identities=16% Similarity=0.239 Sum_probs=60.6
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
++++.++||||+++||..++..|.+.| .+|++.+|+... ..+...+... ...+..++.+|++
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G---~~V~l~~r~~~~--~~~~~~~l~~-------------~~~~~~~~~~Dl~ 75 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQG---AKVIVTDIDQES--GQATVEEITN-------------LGGEALFVSYDME 75 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCC---CEEEEEECCHHH--HHHHHHHHHh-------------cCCcEEEEEccCC
Confidence 578999999999999999999999998 689888876421 1111111100 1245677899999
Q ss_pred CCCCCCCHHHHHHH-------hcCCcEEEEcCcccC
Q psy17489 114 SEHLGLSEDSEQLI-------KSKVNIIFHCAASLR 142 (177)
Q Consensus 114 ~~~~~~~~~~~~~~-------~~~~d~vi~~aa~~~ 142 (177)
+. +++..+ +.++|++|||||...
T Consensus 76 ~~------~~v~~~v~~~~~~~G~iDilVnnAG~~~ 105 (169)
T PRK06720 76 KQ------GDWQRVISITLNAFSRIDMLFQNAGLYK 105 (169)
T ss_pred CH------HHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence 87 444443 347999999999753
No 279
>KOG1209|consensus
Probab=98.86 E-value=1.9e-08 Score=74.33 Aligned_cols=104 Identities=13% Similarity=0.241 Sum_probs=76.7
Q ss_pred CCceEEEecCC-cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 35 RDGQILVTGGT-GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 35 ~~~~vlVtG~~-G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
..+.|+||||+ |+||.++++.+.+.| +.|++.+|+.+. ..++..+ .++.....|++
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G---~~V~AtaR~~e~------M~~L~~~--------------~gl~~~kLDV~ 62 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNG---YLVYATARRLEP------MAQLAIQ--------------FGLKPYKLDVS 62 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCC---eEEEEEccccch------HhhHHHh--------------hCCeeEEeccC
Confidence 45789999876 589999999999999 699999997632 2232211 35778899999
Q ss_pred CCCCCCCHHHHHHHh--------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 114 SEHLGLSEDSEQLIK--------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~--------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
++ +++.... +..|+++||||..= ...+.++.+++|+.|..+..++...
T Consensus 63 ~~------~~V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h 125 (289)
T KOG1209|consen 63 KP------EEVVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSH 125 (289)
T ss_pred Ch------HHHHHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHH
Confidence 98 4555442 24799999999631 1345667899999998888777653
No 280
>PTZ00325 malate dehydrogenase; Provisional
Probab=98.83 E-value=5.9e-08 Score=76.92 Aligned_cols=118 Identities=9% Similarity=0.079 Sum_probs=82.9
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
..++++|.|+|+.|.+|+.++..|...+. ...+..+++...... ...+.+ .... ....+.
T Consensus 5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~-~~elvL~Di~~~~g~-a~Dl~~----------------~~~~--~~v~~~ 64 (321)
T PTZ00325 5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPH-VSELSLYDIVGAPGV-AADLSH----------------IDTP--AKVTGY 64 (321)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHhcCCC-CCEEEEEecCCCccc-ccchhh----------------cCcC--ceEEEe
Confidence 45678999999999999999999986653 468888888321110 011111 1111 222344
Q ss_pred CCCCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 113 ESEHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+++ .++...++++|+||++||.... .+++.+.+..|+..+.++++.++++ +++++|++
T Consensus 65 td~------~~~~~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~-~~~~iviv 123 (321)
T PTZ00325 65 ADG------ELWEKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASS-APKAIVGI 123 (321)
T ss_pred cCC------CchHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEE
Confidence 443 2335677899999999998543 3567788999999999999999999 99998874
No 281
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.81 E-value=6.1e-08 Score=74.55 Aligned_cols=104 Identities=20% Similarity=0.227 Sum_probs=74.6
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
+.++||||||++|.++++.|++.| +.|++..|++... ... . ..+.+..+|+.+.
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~---~~v~~~~r~~~~~------~~~---------------~-~~v~~~~~d~~~~- 54 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARG---HEVRAAVRNPEAA------AAL---------------A-GGVEVVLGDLRDP- 54 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCC---CEEEEEEeCHHHH------Hhh---------------c-CCcEEEEeccCCH-
Confidence 479999999999999999999998 6999999986321 111 1 4688999999998
Q ss_pred CCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489 117 LGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCE 176 (177)
Q Consensus 117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~ 176 (177)
..+...+++++.++++.+... ... ........+..+..+.+. . +++++++
T Consensus 55 -----~~l~~a~~G~~~~~~i~~~~~-~~~--~~~~~~~~~~~~~a~~a~-~-~~~~~~~ 104 (275)
T COG0702 55 -----KSLVAGAKGVDGVLLISGLLD-GSD--AFRAVQVTAVVRAAEAAG-A-GVKHGVS 104 (275)
T ss_pred -----hHHHHHhccccEEEEEecccc-ccc--chhHHHHHHHHHHHHHhc-C-CceEEEE
Confidence 788999999999999988654 222 122333444445554444 2 4445543
No 282
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=98.80 E-value=5.8e-08 Score=74.26 Aligned_cols=93 Identities=17% Similarity=0.323 Sum_probs=64.2
Q ss_pred EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489 39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG 118 (177)
Q Consensus 39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 118 (177)
|+||||||+||++|+..|.+.| ++|+++.|++...+.. ....+.. .
T Consensus 1 IliTGgTGlIG~~L~~~L~~~g---h~v~iltR~~~~~~~~---------------------~~~~v~~--~-------- 46 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGG---HQVTILTRRPPKASQN---------------------LHPNVTL--W-------- 46 (297)
T ss_pred CeEeccccchhHHHHHHHHhCC---CeEEEEEcCCcchhhh---------------------cCccccc--c--------
Confidence 5899999999999999999999 6999999987432100 0011111 1
Q ss_pred CCHHHHHHHhc-CCcEEEEcCcccCc-----hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 119 LSEDSEQLIKS-KVNIIFHCAASLRF-----DEALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 119 ~~~~~~~~~~~-~~d~vi~~aa~~~~-----~~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
+.+..... ++|+|||+||..=. .+..+.+++.-+..|..|.++..+.
T Consensus 47 ---~~~~~~~~~~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~ 99 (297)
T COG1090 47 ---EGLADALTLGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAAS 99 (297)
T ss_pred ---chhhhcccCCCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhc
Confidence 22333334 79999999996421 2334457788899999999987754
No 283
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.80 E-value=1e-07 Score=75.10 Aligned_cols=130 Identities=11% Similarity=0.018 Sum_probs=71.1
Q ss_pred cCCCceEEEecCC--cchHHHHHHHHHhhCCCcCeEEEEEeCCCC------CChHHHHHHH-Hhhhhh----hcccccCc
Q psy17489 33 FYRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKKG------SSPEERVKNM-LNSVIF----DRLNKEVP 99 (177)
Q Consensus 33 ~~~~~~vlVtG~~--G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~------~~~~~~~~~~-~~~~~~----~~~~~~~~ 99 (177)
.++||+++|||++ .+||.++++.|.++| ++|++.++.+.. ... .+.... ...... .++.. ..
T Consensus 5 ~~~gk~alITGa~~~~GIG~a~A~~la~~G---a~Vvv~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~-~~ 79 (299)
T PRK06300 5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAG---ATILVGTWVPIYKIFSQSLEL-GKFDASRKLSNGSLLTFAKIYP-MD 79 (299)
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHHCC---CEEEEEeccchhhhhhhhccc-ccccccccccccchhhhhhHHH-hh
Confidence 4579999999995 899999999999999 688876543100 000 000000 000000 00000 00
Q ss_pred ccCCCeEEEeCCCCCCC-C-CCCHHHHHHH-------hcCCcEEEEcCcccC---------chHHHHHHHHHhHHHHHHH
Q psy17489 100 DFRSKIQVIPSNLESEH-L-GLSEDSEQLI-------KSKVNIIFHCAASLR---------FDEALQKAIRANLYATKQM 161 (177)
Q Consensus 100 ~~~~~v~~~~~D~~~~~-~-~~~~~~~~~~-------~~~~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~~l 161 (177)
.+.....-+..|+.+.. + +...+++..+ +.++|++|||||... ..++|+..+++|+.++.++
T Consensus 80 ~d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l 159 (299)
T PRK06300 80 ASFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSL 159 (299)
T ss_pred hhcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence 00112222333333321 0 0111223332 346899999997531 1367888999999999999
Q ss_pred HHHHHh
Q psy17489 162 LNLAKE 167 (177)
Q Consensus 162 l~~~~~ 167 (177)
.+++..
T Consensus 160 ~~a~~p 165 (299)
T PRK06300 160 LSHFGP 165 (299)
T ss_pred HHHHHH
Confidence 988765
No 284
>KOG1199|consensus
Probab=98.75 E-value=1.7e-08 Score=72.31 Aligned_cols=107 Identities=20% Similarity=0.287 Sum_probs=80.8
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
+.+|-..+||||.+++|...++.|.++| ..|+.++...... ..+.+. ...++.|.+.|+
T Consensus 6 s~kglvalvtggasglg~ataerlakqg---asv~lldlp~skg---~~vake---------------lg~~~vf~padv 64 (260)
T KOG1199|consen 6 STKGLVALVTGGASGLGKATAERLAKQG---ASVALLDLPQSKG---ADVAKE---------------LGGKVVFTPADV 64 (260)
T ss_pred hhcCeeEEeecCcccccHHHHHHHHhcC---ceEEEEeCCcccc---hHHHHH---------------hCCceEEecccc
Confidence 4567889999999999999999999999 7888887644221 222221 236899999999
Q ss_pred CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------------chHHHHHHHHHhHHHHHHHHHHHH
Q psy17489 113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------------FDEALQKAIRANLYATKQMLNLAK 166 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------------~~~~~~~~~~~nv~~~~~ll~~~~ 166 (177)
+++ .+.+.++ .+.|..+||||+.- .-++++..+++|+.+++|+++...
T Consensus 65 tse------kdv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~a 132 (260)
T KOG1199|consen 65 TSE------KDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGA 132 (260)
T ss_pred CcH------HHHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehh
Confidence 987 5555543 47899999999741 136677788999999999988643
No 285
>KOG4039|consensus
Probab=98.75 E-value=3.3e-08 Score=71.00 Aligned_cols=115 Identities=15% Similarity=0.177 Sum_probs=90.4
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+.++..+|.||+|-.|..+++.+.+.+ ...+|+++.|++... +.....+.....|+
T Consensus 15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~-~FSKV~~i~RR~~~d----------------------~at~k~v~q~~vDf 71 (238)
T KOG4039|consen 15 RMQNMSGFVLGATGLCGGGLLKHAQEAP-QFSKVYAILRRELPD----------------------PATDKVVAQVEVDF 71 (238)
T ss_pred hhhccceEEEeccccccHHHHHHHHhcc-cceeEEEEEeccCCC----------------------ccccceeeeEEech
Confidence 3567899999999999999999999985 678999999985322 11224566677787
Q ss_pred CCCCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 113 ESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
... +++...+.+.|+.+++-|-+.-....+..+++.-+....+.++|+.. ++++||.|
T Consensus 72 ~Kl------~~~a~~~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~-Gck~fvLv 129 (238)
T KOG4039|consen 72 SKL------SQLATNEQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEK-GCKTFVLV 129 (238)
T ss_pred HHH------HHHHhhhcCCceEEEeecccccccccCceEeechHHHHHHHHHHHhC-CCeEEEEE
Confidence 776 67777788999999999976544344556788888888999999998 99999875
No 286
>KOG1210|consensus
Probab=98.74 E-value=1.3e-07 Score=73.60 Aligned_cols=109 Identities=19% Similarity=0.231 Sum_probs=78.6
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
++++||||+.++|..++..+...| +.|.++.|+.. ++.+..+. ++- ......+.+..+|+.++
T Consensus 34 ~hi~itggS~glgl~la~e~~~~g---a~Vti~ar~~~------kl~~a~~~--l~l-----~~~~~~v~~~S~d~~~Y- 96 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREG---ADVTITARSGK------KLLEAKAE--LEL-----LTQVEDVSYKSVDVIDY- 96 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHcc---CceEEEeccHH------HHHHHHhh--hhh-----hhccceeeEeccccccH-
Confidence 699999999999999999999999 68999998762 22222111 000 00123477889999777
Q ss_pred CCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 117 LGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 117 ~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
++...+++ .+|.+|||||..- ..+..+..+++|..++.+.++++..
T Consensus 97 -----~~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~ 156 (331)
T KOG1210|consen 97 -----DSVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAAR 156 (331)
T ss_pred -----HHHHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHH
Confidence 56655544 4799999999631 2355667899999999999887654
No 287
>PRK08309 short chain dehydrogenase; Provisional
Probab=98.72 E-value=1.3e-07 Score=69.00 Aligned_cols=99 Identities=16% Similarity=0.219 Sum_probs=67.6
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+++||||+|++|. +++.|.+.| ++|++.+|++. ...++... + + ...++.++.+|+.|.
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G---~~V~v~~R~~~------~~~~l~~~-----l----~-~~~~i~~~~~Dv~d~- 59 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKG---FHVSVIARREV------KLENVKRE-----S----T-TPESITPLPLDYHDD- 59 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCc---CEEEEEECCHH------HHHHHHHH-----h----h-cCCcEEEEEccCCCH-
Confidence 57999999988775 999999999 58888887642 22221110 0 0 124678889999998
Q ss_pred CCCCHHHHHHHhc-------CCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCC----CceeC
Q psy17489 117 LGLSEDSEQLIKS-------KVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLK----RFCEL 177 (177)
Q Consensus 117 ~~~~~~~~~~~~~-------~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~----~~v~v 177 (177)
+++..+++ ++|.+|+..- +.++.++..+|++. +++ +|+++
T Consensus 60 -----~sv~~~i~~~l~~~g~id~lv~~vh---------------~~~~~~~~~~~~~~-gv~~~~~~~~h~ 110 (177)
T PRK08309 60 -----DALKLAIKSTIEKNGPFDLAVAWIH---------------SSAKDALSVVCREL-DGSSETYRLFHV 110 (177)
T ss_pred -----HHHHHHHHHHHHHcCCCeEEEEecc---------------ccchhhHHHHHHHH-ccCCCCceEEEE
Confidence 56666554 3566665533 34566788888888 777 88875
No 288
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=98.71 E-value=1.9e-07 Score=67.39 Aligned_cols=103 Identities=12% Similarity=0.153 Sum_probs=77.3
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+|.|+||+|.+|++|++...++| +.|.+++|++... . ..+.+..++.|+.++
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RG---HeVTAivRn~~K~------~-----------------~~~~~~i~q~Difd~- 53 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRG---HEVTAIVRNASKL------A-----------------ARQGVTILQKDIFDL- 53 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCC---CeeEEEEeChHhc------c-----------------ccccceeecccccCh-
Confidence 689999999999999999999999 6899999987321 1 114677899999998
Q ss_pred CCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 117 LGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
..+.+.+.+.|+||..-+....... .........+++.++.. ++.|++.|
T Consensus 54 -----~~~a~~l~g~DaVIsA~~~~~~~~~-----~~~~k~~~~li~~l~~a-gv~RllVV 103 (211)
T COG2910 54 -----TSLASDLAGHDAVISAFGAGASDND-----ELHSKSIEALIEALKGA-GVPRLLVV 103 (211)
T ss_pred -----hhhHhhhcCCceEEEeccCCCCChh-----HHHHHHHHHHHHHHhhc-CCeeEEEE
Confidence 6778888999999998776421111 11123366677888887 77787654
No 289
>PLN00106 malate dehydrogenase
Probab=98.70 E-value=1.7e-07 Score=74.38 Aligned_cols=115 Identities=10% Similarity=0.034 Sum_probs=81.1
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
.++|.|+|++|.+|..++..|...+. +..+.++++.+ .......+.+ ..... ...++.+.
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~-~~el~L~Di~~-~~g~a~Dl~~----------------~~~~~--~i~~~~~~ 77 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPL-VSELHLYDIAN-TPGVAADVSH----------------INTPA--QVRGFLGD 77 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC-CCEEEEEecCC-CCeeEchhhh----------------CCcCc--eEEEEeCC
Confidence 36899999999999999999987653 35788888865 1110011111 11111 12233222
Q ss_pred CCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 116 HLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+++...++++|+||++||.... ..++.+.++.|+..+.++.+.++++ +.+++|++
T Consensus 78 ------~d~~~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~-~p~aiviv 133 (323)
T PLN00106 78 ------DQLGDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKH-CPNALVNI 133 (323)
T ss_pred ------CCHHHHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEE
Confidence 3466778999999999998543 4578889999999999999999998 77877763
No 290
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=98.67 E-value=2.5e-07 Score=70.27 Aligned_cols=100 Identities=15% Similarity=0.246 Sum_probs=73.3
Q ss_pred cCC--cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCCCC
Q psy17489 43 GGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLGLS 120 (177)
Q Consensus 43 G~~--G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~ 120 (177)
|++ ++||.++++.|++.| ++|++.+|+... ..+.+.++..+ ....++.+|++++
T Consensus 1 g~~~s~GiG~aia~~l~~~G---a~V~~~~~~~~~--~~~~~~~l~~~--------------~~~~~~~~D~~~~----- 56 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEG---ANVILTDRNEEK--LADALEELAKE--------------YGAEVIQCDLSDE----- 56 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTT---EEEEEEESSHHH--HHHHHHHHHHH--------------TTSEEEESCTTSH-----
T ss_pred CCCCCCChHHHHHHHHHHCC---CEEEEEeCChHH--HHHHHHHHHHH--------------cCCceEeecCcch-----
Confidence 566 999999999999999 799999997631 12233333221 1233699999987
Q ss_pred HHHHHHH-------h-cCCcEEEEcCcccCc-----------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 121 EDSEQLI-------K-SKVNIIFHCAASLRF-----------DEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 121 ~~~~~~~-------~-~~~d~vi~~aa~~~~-----------~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
++++.+ + .++|++||+++.... .+.|...+++|+.++..+++.+.+
T Consensus 57 -~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (241)
T PF13561_consen 57 -ESVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALP 121 (241)
T ss_dssp -HHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555554 4 578999999987542 356778899999999999988754
No 291
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.59 E-value=6.5e-07 Score=71.28 Aligned_cols=109 Identities=13% Similarity=0.063 Sum_probs=70.6
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCC----cCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeE-EEeCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPD----IGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQ-VIPSN 111 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~----~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~D 111 (177)
.+|+||||+|++|++++..|+..+.- -..++.+++.+....+.....++ .... ....|
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl-----------------~d~~~~~~~~ 65 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMEL-----------------QDCAFPLLKS 65 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeeh-----------------hhccccccCC
Confidence 47999999999999999999886520 13789998865321110000000 0000 11123
Q ss_pred CCCCCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 112 LESEHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
+... .++...++++|+|||+||.... .++..+.++.|+.....+.+...++
T Consensus 66 ~~~~------~~~~~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~ 117 (325)
T cd01336 66 VVAT------TDPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKY 117 (325)
T ss_pred ceec------CCHHHHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 3222 3456677899999999998643 3445678899999999998888776
No 292
>KOG1203|consensus
Probab=98.58 E-value=2.7e-07 Score=74.76 Aligned_cols=123 Identities=19% Similarity=0.272 Sum_probs=78.3
Q ss_pred ccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEe
Q psy17489 30 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP 109 (177)
Q Consensus 30 ~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 109 (177)
...+.+..+|+|+||+|.+|+-+++.|+++| ..|++++|+.... .+.+.- ...-.....+.
T Consensus 73 ~~~~~~~~~VlVvGatG~vG~~iv~~llkrg---f~vra~VRd~~~a------~~~~~~----------~~~d~~~~~v~ 133 (411)
T KOG1203|consen 73 NNNSKKPTTVLVVGATGKVGRRIVKILLKRG---FSVRALVRDEQKA------EDLLGV----------FFVDLGLQNVE 133 (411)
T ss_pred CCCCCCCCeEEEecCCCchhHHHHHHHHHCC---CeeeeeccChhhh------hhhhcc----------cccccccceee
Confidence 3455677899999999999999999999999 5899999976321 111110 00001222333
Q ss_pred CCCCCCCCCCCHHHHHHHhcC----CcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 110 SNLESEHLGLSEDSEQLIKSK----VNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 110 ~D~~~~~~~~~~~~~~~~~~~----~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
.|..... +.+..+.+. ..+++-+++-....++....+++...|+.|++++|+.. +++|||+|
T Consensus 134 ~~~~~~~-----d~~~~~~~~~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~a-Gvk~~vlv 199 (411)
T KOG1203|consen 134 ADVVTAI-----DILKKLVEAVPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKA-GVKRVVLV 199 (411)
T ss_pred ecccccc-----chhhhhhhhccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHh-CCceEEEE
Confidence 3333321 333444443 34666666644333222334578889999999999998 99999985
No 293
>KOG1014|consensus
Probab=98.57 E-value=1.8e-07 Score=72.66 Aligned_cols=112 Identities=15% Similarity=0.223 Sum_probs=75.9
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
|+=++||||+.+||+..++.|+++|. +|+.++|+.+ ++....++ +.++ ..-.+.++..|+++.
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkrG~---nvvLIsRt~~------KL~~v~kE-I~~~-------~~vev~~i~~Dft~~ 111 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKRGF---NVVLISRTQE------KLEAVAKE-IEEK-------YKVEVRIIAIDFTKG 111 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHcCC---EEEEEeCCHH------HHHHHHHH-HHHH-------hCcEEEEEEEecCCC
Confidence 46799999999999999999999994 7999999863 22222111 0000 114578899999998
Q ss_pred CCCCCHHHHHHHhc--CCcEEEEcCcccCc---------hHHHHHHHHHhHHHHHHHHHHHH
Q psy17489 116 HLGLSEDSEQLIKS--KVNIIFHCAASLRF---------DEALQKAIRANLYATKQMLNLAK 166 (177)
Q Consensus 116 ~~~~~~~~~~~~~~--~~d~vi~~aa~~~~---------~~~~~~~~~~nv~~~~~ll~~~~ 166 (177)
+. .-+.+.+.+. ++.++|||+|.... .+...+.+.+|+.++..+.+...
T Consensus 112 ~~--~ye~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~il 171 (312)
T KOG1014|consen 112 DE--VYEKLLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLIL 171 (312)
T ss_pred ch--hHHHHHHHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhh
Confidence 41 1144555555 46799999997541 11334567789998888777643
No 294
>KOG1431|consensus
Probab=98.56 E-value=1.8e-07 Score=69.79 Aligned_cols=98 Identities=23% Similarity=0.293 Sum_probs=72.8
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+++|+|||++|.+|++|.+.+.+.|.+-.+- .+. ..-.+|+++.
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~w-vf~-----------------------------------~skd~DLt~~ 44 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENW-VFI-----------------------------------GSKDADLTNL 44 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcce-EEe-----------------------------------ccccccccch
Confidence 3789999999999999999999887421111 111 1124588877
Q ss_pred CCCCCHHHHHHHhc--CCcEEEEcCcccC----chHHHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489 116 HLGLSEDSEQLIKS--KVNIIFHCAASLR----FDEALQKAIRANLYATKQMLNLAKECVNLKRFCE 176 (177)
Q Consensus 116 ~~~~~~~~~~~~~~--~~d~vi~~aa~~~----~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~ 176 (177)
.+.+.+|+ ...+|||.||-++ ......++++.|+..-.|++..|-++ +++++|+
T Consensus 45 ------a~t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~-gv~K~vs 104 (315)
T KOG1431|consen 45 ------ADTRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEH-GVKKVVS 104 (315)
T ss_pred ------HHHHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHh-chhhhhh
Confidence 67777776 5799999998653 22334467899999999999999998 8888876
No 295
>KOG1372|consensus
Probab=98.54 E-value=6.6e-07 Score=67.69 Aligned_cols=114 Identities=16% Similarity=0.197 Sum_probs=85.8
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|..||||-+|.=|+.|++.|+..|| .|..+.|+...... .++.+++.+... .......++.+|++|.
T Consensus 29 kvALITGItGQDGSYLaEfLL~KgY---eVHGiiRRsSsFNT-~RIeHlY~nP~~--------h~~~~mkLHYgDmTDs- 95 (376)
T KOG1372|consen 29 KVALITGITGQDGSYLAEFLLSKGY---EVHGIIRRSSSFNT-ARIEHLYSNPHT--------HNGASMKLHYGDMTDS- 95 (376)
T ss_pred eEEEEecccCCCchHHHHHHHhCCc---eeeEEEeeccccch-hhhhhhhcCchh--------cccceeEEeeccccch-
Confidence 4799999999999999999999995 77777776644333 678887765332 1345678999999998
Q ss_pred CCCCHHHHHHHhc--CCcEEEEcCcccCchHH---HHHHHHHhHHHHHHHHHHHHhc
Q psy17489 117 LGLSEDSEQLIKS--KVNIIFHCAASLRFDEA---LQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~~~~---~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
..+.+++. ..+-|+|+|++.++.-+ .+...++...|+.+|+++.+.+
T Consensus 96 -----s~L~k~I~~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c 147 (376)
T KOG1372|consen 96 -----SCLIKLISTIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRAC 147 (376)
T ss_pred -----HHHHHHHhccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhc
Confidence 67777776 46889999998654211 1224567778999999998877
No 296
>PRK09620 hypothetical protein; Provisional
Probab=98.53 E-value=3.8e-07 Score=69.09 Aligned_cols=82 Identities=15% Similarity=0.292 Sum_probs=52.4
Q ss_pred CCCceEEEecCC----------------cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhccccc
Q psy17489 34 YRDGQILVTGGT----------------GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKE 97 (177)
Q Consensus 34 ~~~~~vlVtG~~----------------G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (177)
+.||+|+||+|. ||+|+++++.|++.| +.|+++++...... ..
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~G---a~V~li~g~~~~~~--~~---------------- 59 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKG---AHVIYLHGYFAEKP--ND---------------- 59 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCC---CeEEEEeCCCcCCC--cc----------------
Confidence 368999999886 999999999999999 57887765321100 00
Q ss_pred CcccCCCeEEEeCCCCCCCCCCCHHHHHHHhc--CCcEEEEcCcccCc
Q psy17489 98 VPDFRSKIQVIPSNLESEHLGLSEDSEQLIKS--KVNIIFHCAASLRF 143 (177)
Q Consensus 98 ~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~--~~d~vi~~aa~~~~ 143 (177)
.+ ....+..+..+.... +.+..++. ++|+|||+||+..+
T Consensus 60 ~~-~~~~~~~V~s~~d~~------~~l~~~~~~~~~D~VIH~AAvsD~ 100 (229)
T PRK09620 60 IN-NQLELHPFEGIIDLQ------DKMKSIITHEKVDAVIMAAAGSDW 100 (229)
T ss_pred cC-CceeEEEEecHHHHH------HHHHHHhcccCCCEEEECccccce
Confidence 00 011233344422222 35666664 68999999998654
No 297
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=98.40 E-value=5.2e-06 Score=62.12 Aligned_cols=116 Identities=14% Similarity=0.160 Sum_probs=79.5
Q ss_pred cCCCceEEEecCCc--chHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489 33 FYRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS 110 (177)
Q Consensus 33 ~~~~~~vlVtG~~G--~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 110 (177)
.++||+++|+|-.. .|+..|++.|.++| +++......+ +++++++++.+. .....+++|
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~G---AeL~fTy~~e---~l~krv~~la~~-------------~~s~~v~~c 63 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQG---AELAFTYQGE---RLEKRVEELAEE-------------LGSDLVLPC 63 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcC---CEEEEEeccH---HHHHHHHHHHhh-------------ccCCeEEec
Confidence 47899999999755 69999999999999 6766665543 455666665442 233567899
Q ss_pred CCCCCC-CCCCHHHHHHHhcCCcEEEEcCcccCc-----------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 111 NLESEH-LGLSEDSEQLIKSKVNIIFHCAASLRF-----------DEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 111 D~~~~~-~~~~~~~~~~~~~~~d~vi~~aa~~~~-----------~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
|++++. +....+.+.+-+..+|+++|+-|+... .+.+...+++.......+.+.++.
T Consensus 64 DV~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~ 132 (259)
T COG0623 64 DVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARP 132 (259)
T ss_pred CCCCHHHHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHH
Confidence 999983 222233333344478999999997642 234444567777777777777765
No 298
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=98.39 E-value=3e-06 Score=68.42 Aligned_cols=86 Identities=14% Similarity=0.141 Sum_probs=57.3
Q ss_pred CCCceEEEecCCcchHHH--HHHHHHhhCCCcCeEEEEEeCCCCCC---------hHHHHHHHHhhhhhhcccccCcccC
Q psy17489 34 YRDGQILVTGGTGFMGKL--LIDKLLRSFPDIGAIYIMVRDKKGSS---------PEERVKNMLNSVIFDRLNKEVPDFR 102 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~--l~~~L~~~g~~~~~v~~~~r~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (177)
..+|+++|||+++++|.+ +++.| +.| .+++++.+...... ..+.+.+.... ..
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~G---A~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~------------~G 102 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAG---ADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKA------------AG 102 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcC---CeEEEEecCcchhhhcccccccchHHHHHHHHHh------------cC
Confidence 356899999999999999 89999 888 57777775321110 01122222211 12
Q ss_pred CCeEEEeCCCCCCCCCCCHHHHHHH-------hcCCcEEEEcCccc
Q psy17489 103 SKIQVIPSNLESEHLGLSEDSEQLI-------KSKVNIIFHCAASL 141 (177)
Q Consensus 103 ~~v~~~~~D~~~~~~~~~~~~~~~~-------~~~~d~vi~~aa~~ 141 (177)
..+..+.+|+.++ +.+..+ +.++|++||++|..
T Consensus 103 ~~a~~i~~DVss~------E~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 103 LYAKSINGDAFSD------EIKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred CceEEEEcCCCCH------HHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 3567789999997 444444 34689999999975
No 299
>KOG2774|consensus
Probab=98.34 E-value=2.4e-07 Score=69.59 Aligned_cols=113 Identities=19% Similarity=0.231 Sum_probs=78.1
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN 111 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D 111 (177)
+..+.-+|+|||+-|.+|..++..|... +.-..|+..+-.+.... -...--++..|
T Consensus 40 ~~~~~PrvLITG~LGQLG~~~A~LLR~~-yGs~~VILSDI~KPp~~-----------------------V~~~GPyIy~D 95 (366)
T KOG2774|consen 40 QTQKAPRVLITGSLGQLGRGLASLLRYM-YGSECVILSDIVKPPAN-----------------------VTDVGPYIYLD 95 (366)
T ss_pred ccCCCCeEEEecchHHHhHHHHHHHHHH-hCCccEehhhccCCchh-----------------------hcccCCchhhh
Confidence 3445568999999999999999999765 33356766554332210 01223467788
Q ss_pred CCCCCCCCCHHHHHHHh--cCCcEEEEcCcccCc-hH-HHHHHHHHhHHHHHHHHHHHHhcCCCCCce
Q psy17489 112 LESEHLGLSEDSEQLIK--SKVNIIFHCAASLRF-DE-ALQKAIRANLYATKQMLNLAKECVNLKRFC 175 (177)
Q Consensus 112 ~~~~~~~~~~~~~~~~~--~~~d~vi~~aa~~~~-~~-~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v 175 (177)
+.|. ..+++++ .++|++||..+..+- .+ +-.-+.++|+.|..|+++.|+++ +++-||
T Consensus 96 ILD~------K~L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~-kL~iFV 156 (366)
T KOG2774|consen 96 ILDQ------KSLEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKH-KLKVFV 156 (366)
T ss_pred hhcc------ccHHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHc-CeeEee
Confidence 8887 5666654 479999999886431 11 11125789999999999999999 776665
No 300
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.34 E-value=2.8e-06 Score=68.72 Aligned_cols=79 Identities=20% Similarity=0.354 Sum_probs=63.8
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+++++|.|| |++|+.++..|++.|. .+|++.+|+.... +++... ...+++.++.|+.+.
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d--~~V~iAdRs~~~~---~~i~~~---------------~~~~v~~~~vD~~d~ 59 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGD--GEVTIADRSKEKC---ARIAEL---------------IGGKVEALQVDAADV 59 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCC--ceEEEEeCCHHHH---HHHHhh---------------ccccceeEEecccCh
Confidence 478999998 9999999999999874 7999999985321 222221 224899999999998
Q ss_pred CCCCCHHHHHHHhcCCcEEEEcCccc
Q psy17489 116 HLGLSEDSEQLIKSKVNIIFHCAASL 141 (177)
Q Consensus 116 ~~~~~~~~~~~~~~~~d~vi~~aa~~ 141 (177)
+.+.+++++.|+||+++.+.
T Consensus 60 ------~al~~li~~~d~VIn~~p~~ 79 (389)
T COG1748 60 ------DALVALIKDFDLVINAAPPF 79 (389)
T ss_pred ------HHHHHHHhcCCEEEEeCCch
Confidence 78999999999999999863
No 301
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.34 E-value=3.4e-06 Score=63.97 Aligned_cols=77 Identities=12% Similarity=0.253 Sum_probs=48.7
Q ss_pred eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCC
Q psy17489 38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHL 117 (177)
Q Consensus 38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 117 (177)
+++=-.++|++|.++++.|++.| ++|+++.|..... +....++.++.++..+.-
T Consensus 18 R~itN~SSG~iG~aLA~~L~~~G---~~V~li~r~~~~~----------------------~~~~~~v~~i~v~s~~~m- 71 (229)
T PRK06732 18 RGITNHSTGQLGKIIAETFLAAG---HEVTLVTTKTAVK----------------------PEPHPNLSIIEIENVDDL- 71 (229)
T ss_pred eeecCccchHHHHHHHHHHHhCC---CEEEEEECccccc----------------------CCCCCCeEEEEEecHHHH-
Confidence 34444568899999999999999 5888887653210 000134566554322210
Q ss_pred CCCHHHHHHHhcCCcEEEEcCcccCc
Q psy17489 118 GLSEDSEQLIKSKVNIIFHCAASLRF 143 (177)
Q Consensus 118 ~~~~~~~~~~~~~~d~vi~~aa~~~~ 143 (177)
.+.+...++++|++||+||...+
T Consensus 72 ---~~~l~~~~~~~DivIh~AAvsd~ 94 (229)
T PRK06732 72 ---LETLEPLVKDHDVLIHSMAVSDY 94 (229)
T ss_pred ---HHHHHHHhcCCCEEEeCCccCCc
Confidence 03445556789999999998653
No 302
>KOG1478|consensus
Probab=98.30 E-value=8.3e-06 Score=61.98 Aligned_cols=120 Identities=12% Similarity=0.155 Sum_probs=74.9
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCC--cCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPD--IGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~--~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
|.++|||+++++|.+|+.+|++...+ +-++....|+- .++++-..++.+- .+...-+++++..|++|
T Consensus 4 KvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~--~kae~vc~~lk~f---------~p~~~i~~~yvlvD~sN 72 (341)
T KOG1478|consen 4 KVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNM--SKAEAVCAALKAF---------HPKSTIEVTYVLVDVSN 72 (341)
T ss_pred eEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCCh--hHHHHHHHHHHHh---------CCCceeEEEEEEEehhh
Confidence 57999999999999999999987532 11455556654 2233333332221 12123467889999998
Q ss_pred CC-CCCCHHHHHHHhcCCcEEEEcCcccCc----------------------------------hHHHHHHHHHhHHHHH
Q psy17489 115 EH-LGLSEDSEQLIKSKVNIIFHCAASLRF----------------------------------DEALQKAIRANLYATK 159 (177)
Q Consensus 115 ~~-~~~~~~~~~~~~~~~d~vi~~aa~~~~----------------------------------~~~~~~~~~~nv~~~~ 159 (177)
-. +-..-.++.+-+.+.|.++-|||+... .++....++.||.|.+
T Consensus 73 m~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhf 152 (341)
T KOG1478|consen 73 MQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHF 152 (341)
T ss_pred HHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchh
Confidence 62 000112222234478999999997431 2344567899999998
Q ss_pred HHHHHHHh
Q psy17489 160 QMLNLAKE 167 (177)
Q Consensus 160 ~ll~~~~~ 167 (177)
.+++....
T Consensus 153 yli~~l~p 160 (341)
T KOG1478|consen 153 YLIRELEP 160 (341)
T ss_pred hhHhhhhh
Confidence 88776543
No 303
>PRK05086 malate dehydrogenase; Provisional
Probab=98.24 E-value=1.4e-05 Score=63.38 Aligned_cols=114 Identities=11% Similarity=0.026 Sum_probs=73.1
Q ss_pred ceEEEecCCcchHHHHHHHHHh-hCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLR-SFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~-~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
|+++|+||+|.+|++++..|.. .+ ....++++++++... ....++ . .......+.+ .+.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~-~~~el~L~d~~~~~~---g~alDl-------------~-~~~~~~~i~~--~~~ 60 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLP-AGSELSLYDIAPVTP---GVAVDL-------------S-HIPTAVKIKG--FSG 60 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCC-CccEEEEEecCCCCc---ceehhh-------------h-cCCCCceEEE--eCC
Confidence 6899999999999999998855 33 234667767654211 000000 0 0011111222 111
Q ss_pred CCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 116 HLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
+++...++++|+||.++|.... .++..+.+..|......+++...++ +.+++|.+
T Consensus 61 ------~d~~~~l~~~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~-~~~~iviv 116 (312)
T PRK05086 61 ------EDPTPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKT-CPKACIGI 116 (312)
T ss_pred ------CCHHHHcCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 2344556889999999997543 3345668899999999999999998 77777753
No 304
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=98.23 E-value=5e-06 Score=67.92 Aligned_cols=76 Identities=18% Similarity=0.148 Sum_probs=54.9
Q ss_pred ccCCCceEEEecC----------------CcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhccc
Q psy17489 32 DFYRDGQILVTGG----------------TGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLN 95 (177)
Q Consensus 32 ~~~~~~~vlVtG~----------------~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 95 (177)
..++||+++|||| +|.+|.++++.|.+.| ++|+++++.....
T Consensus 184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~G---a~V~~v~~~~~~~------------------- 241 (399)
T PRK05579 184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRG---ADVTLVSGPVNLP------------------- 241 (399)
T ss_pred cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCC---CEEEEeCCCcccc-------------------
Confidence 3468999999999 8889999999999999 6888887754210
Q ss_pred ccCcccCCCeEEEeCCCCCCCCCCCHHHHHHH----hcCCcEEEEcCcccC
Q psy17489 96 KEVPDFRSKIQVIPSNLESEHLGLSEDSEQLI----KSKVNIIFHCAASLR 142 (177)
Q Consensus 96 ~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~----~~~~d~vi~~aa~~~ 142 (177)
.... ....|+.+. +++..+ ++++|++||+||+..
T Consensus 242 -----~~~~--~~~~dv~~~------~~~~~~v~~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 242 -----TPAG--VKRIDVESA------QEMLDAVLAALPQADIFIMAAAVAD 279 (399)
T ss_pred -----CCCC--cEEEccCCH------HHHHHHHHHhcCCCCEEEEcccccc
Confidence 0011 234577765 444443 347899999999854
No 305
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.22 E-value=3e-06 Score=64.46 Aligned_cols=90 Identities=11% Similarity=0.070 Sum_probs=65.8
Q ss_pred HHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCCCCHHHHHHHhc--
Q psy17489 52 LIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKS-- 129 (177)
Q Consensus 52 l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~-- 129 (177)
+++.|++.| ++|++++|+.... ....++++|+++. +++..+++
T Consensus 1 ~a~~l~~~G---~~Vv~~~r~~~~~--------------------------~~~~~~~~Dl~~~------~~v~~~~~~~ 45 (241)
T PRK12428 1 TARLLRFLG---ARVIGVDRREPGM--------------------------TLDGFIQADLGDP------ASIDAAVAAL 45 (241)
T ss_pred ChHHHHhCC---CEEEEEeCCcchh--------------------------hhhHhhcccCCCH------HHHHHHHHHh
Confidence 467888898 6899998875321 0123578899987 66776665
Q ss_pred --CCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCceeC
Q psy17489 130 --KVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKEC-VNLKRFCEL 177 (177)
Q Consensus 130 --~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~v 177 (177)
++|++|||||... ..+++..+++|+.++..+++.+.+. ....+||++
T Consensus 46 ~~~iD~li~nAG~~~-~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~i 95 (241)
T PRK12428 46 PGRIDALFNIAGVPG-TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNV 95 (241)
T ss_pred cCCCeEEEECCCCCC-CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEe
Confidence 5899999999753 3567889999999999999998753 122577764
No 306
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=98.14 E-value=1.3e-05 Score=65.18 Aligned_cols=78 Identities=17% Similarity=0.386 Sum_probs=56.4
Q ss_pred EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489 39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG 118 (177)
Q Consensus 39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 118 (177)
|+|.|| |++|+.+++.|.+.+ ...+|++.+|+. +++++...+. ...++.++..|+.|.
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~-~~~~v~va~r~~------~~~~~~~~~~-----------~~~~~~~~~~d~~~~--- 58 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRG-PFEEVTVADRNP------EKAERLAEKL-----------LGDRVEAVQVDVNDP--- 58 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTT-CE-EEEEEESSH------HHHHHHHT-------------TTTTEEEEE--TTTH---
T ss_pred CEEEcC-cHHHHHHHHHHhcCC-CCCcEEEEECCH------HHHHHHHhhc-----------cccceeEEEEecCCH---
Confidence 689999 999999999999985 333889999876 3333332210 236899999999998
Q ss_pred CCHHHHHHHhcCCcEEEEcCccc
Q psy17489 119 LSEDSEQLIKSKVNIIFHCAASL 141 (177)
Q Consensus 119 ~~~~~~~~~~~~~d~vi~~aa~~ 141 (177)
+++..++++.|+|||++++.
T Consensus 59 ---~~l~~~~~~~dvVin~~gp~ 78 (386)
T PF03435_consen 59 ---ESLAELLRGCDVVINCAGPF 78 (386)
T ss_dssp ---HHHHHHHTTSSEEEE-SSGG
T ss_pred ---HHHHHHHhcCCEEEECCccc
Confidence 77999999999999999975
No 307
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.12 E-value=1.4e-05 Score=63.87 Aligned_cols=40 Identities=18% Similarity=0.282 Sum_probs=33.3
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
.+.+++++||||+|+||+.++++|...+ .+..++.+.|+.
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~-gv~~lilv~R~~ 191 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKT-GVAELLLVARQQ 191 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhC-CCCEEEEEcCCH
Confidence 5788999999999999999999998642 246888888864
No 308
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.12 E-value=1.4e-05 Score=59.03 Aligned_cols=84 Identities=21% Similarity=0.225 Sum_probs=56.2
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+++++++|+||+|.+|..++..|.+.| .+|+..+|+. ++....... +. ..........|.
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g---~~V~l~~R~~------~~~~~l~~~-----l~-----~~~~~~~~~~~~ 85 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLAREG---ARVVLVGRDL------ERAQKAADS-----LR-----ARFGEGVGAVET 85 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEcCCH------HHHHHHHHH-----HH-----hhcCCcEEEeeC
Confidence 3568999999999999999999999987 5888888864 222222111 00 001233445566
Q ss_pred CCCCCCCCHHHHHHHhcCCcEEEEcCccc
Q psy17489 113 ESEHLGLSEDSEQLIKSKVNIIFHCAASL 141 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~ 141 (177)
.+. +++...+.++|+||++.+..
T Consensus 86 ~~~------~~~~~~~~~~diVi~at~~g 108 (194)
T cd01078 86 SDD------AARAAAIKGADVVFAAGAAG 108 (194)
T ss_pred CCH------HHHHHHHhcCCEEEECCCCC
Confidence 665 56677788899988876543
No 309
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=98.11 E-value=3.7e-05 Score=61.30 Aligned_cols=103 Identities=15% Similarity=0.153 Sum_probs=69.6
Q ss_pred eEEEecCCcchHHHHHHHHHhhCCCcC-----eEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 38 QILVTGGTGFMGKLLIDKLLRSFPDIG-----AIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~-----~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
+|.|+|++|.+|++++..|...|. +. .++.+++.+... .......|+
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~-~~~~~e~el~LiD~~~~~~---------------------------~a~g~~~Dl 52 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRM-LGKDQPIILHLLDIPPAMK---------------------------VLEGVVMEL 52 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccc-cCCCCccEEEEEecCCccc---------------------------ccceeEeeh
Confidence 589999999999999999987653 11 588888754321 112223333
Q ss_pred CCCCCCC-----CHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 113 ESEHLGL-----SEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 113 ~~~~~~~-----~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
.+..... ........++++|+||++||.... .+++.+.++.|+.....+.+...++
T Consensus 53 ~d~~~~~~~~~~~~~~~~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~ 114 (324)
T TIGR01758 53 MDCAFPLLDGVVPTHDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKL 114 (324)
T ss_pred hcccchhcCceeccCChHHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 3332000 001224567899999999997543 3457788999999999999988886
No 310
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.08 E-value=4.7e-05 Score=60.64 Aligned_cols=103 Identities=15% Similarity=0.118 Sum_probs=69.0
Q ss_pred eEEEecCCcchHHHHHHHHHhhCCCcC-----eEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 38 QILVTGGTGFMGKLLIDKLLRSFPDIG-----AIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~-----~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
+|.|+||+|.+|++++..|...|. +. .++.+++++..+ .......|+
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~-~~~~~~~~l~L~Di~~~~~---------------------------~~~g~~~Dl 53 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGEL-FGDDQPVILHLLDIPPAMK---------------------------ALEGVVMEL 53 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCc-cCCCCceEEEEEecCCccC---------------------------ccceeeeeh
Confidence 689999999999999999987653 22 488888765210 112222333
Q ss_pred CCCCCC-C----CHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 113 ESEHLG-L----SEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 113 ~~~~~~-~----~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
.+.... . ........++++|+||++||.... .++-.+.++.|+.....+.....++
T Consensus 54 ~d~~~~~~~~~~i~~~~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~ 115 (323)
T cd00704 54 QDCAFPLLKGVVITTDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKV 115 (323)
T ss_pred hhhcccccCCcEEecChHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHh
Confidence 332100 0 001234567899999999997542 3456678899999999999888876
No 311
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=98.08 E-value=2.6e-05 Score=61.18 Aligned_cols=86 Identities=10% Similarity=0.033 Sum_probs=57.0
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCC-CChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG-SSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.++++++|+|+ |++|++++..|.+.|. .+|++++|+... ++. +.+.+.+.. ....+.+...|+
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~--~~V~I~~R~~~~~~~a-~~l~~~l~~------------~~~~~~~~~~d~ 187 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGA--KEITIFNIKDDFYERA-EQTAEKIKQ------------EVPECIVNVYDL 187 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCchHHHHH-HHHHHHHhh------------cCCCceeEEech
Confidence 46789999998 7999999999999984 569999987521 111 112111110 112344556677
Q ss_pred CCCCCCCCHHHHHHHhcCCcEEEEcCccc
Q psy17489 113 ESEHLGLSEDSEQLIKSKVNIIFHCAASL 141 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~ 141 (177)
.+. +.+...++.+|+|||+-...
T Consensus 188 ~~~------~~~~~~~~~~DilINaTp~G 210 (289)
T PRK12548 188 NDT------EKLKAEIASSDILVNATLVG 210 (289)
T ss_pred hhh------hHHHhhhccCCEEEEeCCCC
Confidence 665 55666777889999987643
No 312
>KOG2733|consensus
Probab=97.95 E-value=4.3e-05 Score=60.67 Aligned_cols=89 Identities=18% Similarity=0.342 Sum_probs=60.2
Q ss_pred eEEEecCCcchHHHHHHHHHhhC-CCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 38 QILVTGGTGFMGKLLIDKLLRSF-PDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 38 ~vlVtG~~G~iG~~l~~~L~~~g-~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
-++|.||+||.|..+++.+.+.+ .+--..-+..|++ +++.+.+.+.... ...+.+....+-+|..|+
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~------~KL~~vL~~~~~k-----~~~~ls~~~i~i~D~~n~- 74 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNE------KKLQEVLEKVGEK-----TGTDLSSSVILIADSANE- 74 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCH------HHHHHHHHHHhhc-----cCCCcccceEEEecCCCH-
Confidence 58999999999999999998822 0113555556665 3343333221111 111123334788999998
Q ss_pred CCCCHHHHHHHhcCCcEEEEcCcccCc
Q psy17489 117 LGLSEDSEQLIKSKVNIIFHCAASLRF 143 (177)
Q Consensus 117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~ 143 (177)
+++.+..+++.+|+||+|+..+
T Consensus 75 -----~Sl~emak~~~vivN~vGPyR~ 96 (423)
T KOG2733|consen 75 -----ASLDEMAKQARVIVNCVGPYRF 96 (423)
T ss_pred -----HHHHHHHhhhEEEEecccccee
Confidence 8999999999999999998654
No 313
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=97.91 E-value=0.00017 Score=50.58 Aligned_cols=111 Identities=13% Similarity=0.129 Sum_probs=72.5
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCC-hHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS-PEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
++|.|+|++|.+|++++..|...+. ..+++.++++++... ....+.+.... ...+......+..
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l-~~ei~L~D~~~~~~~g~a~Dl~~~~~~------------~~~~~~i~~~~~~-- 65 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGL-ADEIVLIDINEDKAEGEALDLSHASAP------------LPSPVRITSGDYE-- 65 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTT-SSEEEEEESSHHHHHHHHHHHHHHHHG------------STEEEEEEESSGG--
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CCceEEeccCcccceeeehhhhhhhhh------------ccccccccccccc--
Confidence 5899999999999999999998864 467999988753110 01122221110 1112233332222
Q ss_pred CCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCc
Q psy17489 116 HLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRF 174 (177)
Q Consensus 116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~ 174 (177)
.++++|+||-+||.... .++-.+.++.|......+.+...++ ..+-+
T Consensus 66 -----------~~~~aDivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~-~p~~~ 113 (141)
T PF00056_consen 66 -----------ALKDADIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKY-APDAI 113 (141)
T ss_dssp -----------GGTTESEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHH-STTSE
T ss_pred -----------ccccccEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHh-CCccE
Confidence 35788999999997532 3456678899999999999988887 44333
No 314
>KOG4288|consensus
Probab=97.87 E-value=2.3e-05 Score=58.78 Aligned_cols=108 Identities=16% Similarity=0.197 Sum_probs=82.0
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
...++.|++||.|+++++.-...| ..|-.+.|++.. +. . ..+...+.|+++|....
T Consensus 53 e~tlvlggnpfsgs~vlk~A~~vv---~svgilsen~~k-~~----l---------------~sw~~~vswh~gnsfss- 108 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNATNVV---HSVGILSENENK-QT----L---------------SSWPTYVSWHRGNSFSS- 108 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHHhhc---eeeeEeecccCc-ch----h---------------hCCCcccchhhcccccc-
Confidence 468999999999999999999987 578888887542 11 1 12456788999987665
Q ss_pred CCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489 117 LGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL 177 (177)
Q Consensus 117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v 177 (177)
.-++....++..++.+++..+ ....+.++|-....+..+++.+. ++++||||
T Consensus 109 -----n~~k~~l~g~t~v~e~~ggfg---n~~~m~~ing~ani~a~kaa~~~-gv~~fvyI 160 (283)
T KOG4288|consen 109 -----NPNKLKLSGPTFVYEMMGGFG---NIILMDRINGTANINAVKAAAKA-GVPRFVYI 160 (283)
T ss_pred -----CcchhhhcCCcccHHHhcCcc---chHHHHHhccHhhHHHHHHHHHc-CCceEEEE
Confidence 235555667788888887543 23446688888888999999998 99999996
No 315
>KOG1204|consensus
Probab=97.87 E-value=0.00019 Score=53.79 Aligned_cols=106 Identities=21% Similarity=0.199 Sum_probs=65.1
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
.++.+++||++.+||..++..+...+.. ..++...|.... ...+....+|...
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e-~~r~g~~r~~a~--------------------------~~~L~v~~gd~~v 57 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDE-ALRYGVARLLAE--------------------------LEGLKVAYGDDFV 57 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchH-HHHHhhhccccc--------------------------ccceEEEecCCcc
Confidence 3567999999999999999988887632 122333332211 1344444444443
Q ss_pred CCCCC-CHHH-HHHHhc-------CCcEEEEcCcccC----------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 115 EHLGL-SEDS-EQLIKS-------KVNIIFHCAASLR----------FDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 115 ~~~~~-~~~~-~~~~~~-------~~d~vi~~aa~~~----------~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
...+. .++. +...++ .-++||||||... ....|..+|+.|+.+...|.+++..
T Consensus 58 ~~~g~~~e~~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~ 129 (253)
T KOG1204|consen 58 HVVGDITEEQLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALP 129 (253)
T ss_pred eechHHHHHHHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHH
Confidence 33221 1111 111111 4699999999643 2467888999999999999887754
No 316
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=97.71 E-value=0.00015 Score=59.18 Aligned_cols=101 Identities=12% Similarity=0.187 Sum_probs=63.3
Q ss_pred cCCCceEEEecCC----------------cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccc
Q psy17489 33 FYRDGQILVTGGT----------------GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNK 96 (177)
Q Consensus 33 ~~~~~~vlVtG~~----------------G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (177)
.++|++++||||. |.+|.++++.|...| ++|+.+.+.....
T Consensus 182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G---a~V~~~~g~~~~~-------------------- 238 (390)
T TIGR00521 182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG---ADVTLITGPVSLL-------------------- 238 (390)
T ss_pred ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCC---CEEEEeCCCCccC--------------------
Confidence 4789999999993 469999999999999 6888777543210
Q ss_pred cCcccCCCeEEEeCCCCCCCCCCCHHHH-HHHh----cCCcEEEEcCcccCchHH------H---HHHHHHhHHHHHHHH
Q psy17489 97 EVPDFRSKIQVIPSNLESEHLGLSEDSE-QLIK----SKVNIIFHCAASLRFDEA------L---QKAIRANLYATKQML 162 (177)
Q Consensus 97 ~~~~~~~~v~~~~~D~~~~~~~~~~~~~-~~~~----~~~d~vi~~aa~~~~~~~------~---~~~~~~nv~~~~~ll 162 (177)
....+ ...|+.+. +++ +.++ .++|++|++||+..+... + ...+..|+..+--++
T Consensus 239 ----~~~~~--~~~~v~~~------~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil 306 (390)
T TIGR00521 239 ----TPPGV--KSIKVSTA------EEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDII 306 (390)
T ss_pred ----CCCCc--EEEEeccH------HHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHH
Confidence 00122 34566665 444 4333 468999999998653110 0 111234555555566
Q ss_pred HHHHhc
Q psy17489 163 NLAKEC 168 (177)
Q Consensus 163 ~~~~~~ 168 (177)
+..++.
T Consensus 307 ~~l~~~ 312 (390)
T TIGR00521 307 AEVRKI 312 (390)
T ss_pred HHHHhh
Confidence 665543
No 317
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.63 E-value=0.00047 Score=57.22 Aligned_cols=78 Identities=13% Similarity=0.169 Sum_probs=53.4
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
+++|+++|+|+++ +|..+++.|++.| +.|++.+++... ...+.+.++.. ..+.++.+|..
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G---~~V~~~d~~~~~-~~~~~~~~l~~---------------~~~~~~~~~~~ 62 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKLG---AKVILTDEKEED-QLKEALEELGE---------------LGIELVLGEYP 62 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHCC---CEEEEEeCCchH-HHHHHHHHHHh---------------cCCEEEeCCcc
Confidence 4689999999888 9999999999999 588888875421 12122222111 24566777665
Q ss_pred CCCCCCCHHHHHHHhcCCcEEEEcCcccC
Q psy17489 114 SEHLGLSEDSEQLIKSKVNIIFHCAASLR 142 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~ 142 (177)
+. ..+++|+||++++...
T Consensus 63 ~~-----------~~~~~d~vv~~~g~~~ 80 (450)
T PRK14106 63 EE-----------FLEGVDLVVVSPGVPL 80 (450)
T ss_pred hh-----------HhhcCCEEEECCCCCC
Confidence 42 2457899999999743
No 318
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=97.59 E-value=0.00046 Score=53.23 Aligned_cols=74 Identities=14% Similarity=0.186 Sum_probs=50.5
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+|+|+||||. |..+++.|.+.| ..|++..+++..... +. .......+ .+..+.
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g---~~v~~s~~t~~~~~~---~~-----------------~~g~~~v~-~g~l~~- 54 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQG---IEILVTVTTSEGKHL---YP-----------------IHQALTVH-TGALDP- 54 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCC---CeEEEEEccCCcccc---cc-----------------ccCCceEE-ECCCCH-
Confidence 57999999999 999999999998 588888887654311 00 00112233 333443
Q ss_pred CCCCHHHHHHHhc--CCcEEEEcCccc
Q psy17489 117 LGLSEDSEQLIKS--KVNIIFHCAASL 141 (177)
Q Consensus 117 ~~~~~~~~~~~~~--~~d~vi~~aa~~ 141 (177)
+.+...+. ++++||+.+.+.
T Consensus 55 -----~~l~~~l~~~~i~~VIDAtHPf 76 (256)
T TIGR00715 55 -----QELREFLKRHSIDILVDATHPF 76 (256)
T ss_pred -----HHHHHHHHhcCCCEEEEcCCHH
Confidence 55766664 599999998863
No 319
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=97.56 E-value=0.0018 Score=51.44 Aligned_cols=107 Identities=12% Similarity=0.155 Sum_probs=70.2
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCC-hHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS-PEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
..+++|.|+|+ |.+|.+++..|+..|. +..+..++++++... ....+.+... ...++.....
T Consensus 4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~-~~el~L~D~~~~~~~g~~~Dl~~~~~-------------~~~~~~i~~~-- 66 (315)
T PRK00066 4 KQHNKVVLVGD-GAVGSSYAYALVNQGI-ADELVIIDINKEKAEGDAMDLSHAVP-------------FTSPTKIYAG-- 66 (315)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCCchhHHHHHHHHhhcc-------------ccCCeEEEeC--
Confidence 35679999998 9999999999998873 347888888653221 1112222110 0112222221
Q ss_pred CCCCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 113 ESEHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
.++ .++++|+||-.||.... .++-.+.++.|+.....+++...++
T Consensus 67 ----------~~~-~~~~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~ 112 (315)
T PRK00066 67 ----------DYS-DCKDADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMAS 112 (315)
T ss_pred ----------CHH-HhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 122 36899999999997432 3455668899999999998888876
No 320
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.54 E-value=0.0012 Score=45.94 Aligned_cols=79 Identities=19% Similarity=0.214 Sum_probs=53.2
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL 112 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~ 112 (177)
.+++++++|.|+ |+.|+.++..|.+.|. .+|+++.|+. ++.+++.... ....+.++..
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~--~~i~i~nRt~------~ra~~l~~~~-----------~~~~~~~~~~-- 66 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGA--KEITIVNRTP------ERAEALAEEF-----------GGVNIEAIPL-- 66 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTS--SEEEEEESSH------HHHHHHHHHH-----------TGCSEEEEEG--
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCC--CEEEEEECCH------HHHHHHHHHc-----------CccccceeeH--
Confidence 567999999996 8899999999999984 6799999875 3333333211 0123444443
Q ss_pred CCCCCCCCHHHHHHHhcCCcEEEEcCcccC
Q psy17489 113 ESEHLGLSEDSEQLIKSKVNIIFHCAASLR 142 (177)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~ 142 (177)
+++...+.++|+||++.+...
T Consensus 67 ---------~~~~~~~~~~DivI~aT~~~~ 87 (135)
T PF01488_consen 67 ---------EDLEEALQEADIVINATPSGM 87 (135)
T ss_dssp ---------GGHCHHHHTESEEEE-SSTTS
T ss_pred ---------HHHHHHHhhCCeEEEecCCCC
Confidence 234456678899999977543
No 321
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=97.53 E-value=0.00041 Score=50.92 Aligned_cols=79 Identities=20% Similarity=0.274 Sum_probs=45.8
Q ss_pred CCCceEEEecC----------------CcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhccccc
Q psy17489 34 YRDGQILVTGG----------------TGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKE 97 (177)
Q Consensus 34 ~~~~~vlVtG~----------------~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (177)
++||+|+||+| +|..|.+|++.+...| +.|+.+.......
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~G---a~V~li~g~~~~~--------------------- 56 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRG---AEVTLIHGPSSLP--------------------- 56 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT----EEEEEE-TTS-----------------------
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCC---CEEEEEecCcccc---------------------
Confidence 35677777765 5669999999999999 6788776653110
Q ss_pred CcccCCCeEEEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccCc
Q psy17489 98 VPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRF 143 (177)
Q Consensus 98 ~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~ 143 (177)
....+..+..+-..+- .+.+...+...|++|++||+.++
T Consensus 57 ---~p~~~~~i~v~sa~em----~~~~~~~~~~~Di~I~aAAVsDf 95 (185)
T PF04127_consen 57 ---PPPGVKVIRVESAEEM----LEAVKELLPSADIIIMAAAVSDF 95 (185)
T ss_dssp -----TTEEEEE-SSHHHH----HHHHHHHGGGGSEEEE-SB--SE
T ss_pred ---ccccceEEEecchhhh----hhhhccccCcceeEEEecchhhe
Confidence 1135666665433320 13344455678999999998764
No 322
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=97.52 E-value=0.002 Score=51.42 Aligned_cols=110 Identities=12% Similarity=0.044 Sum_probs=70.3
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcC-----eEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIG-----AIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS 110 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~-----~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 110 (177)
..+|.|+|++|++|++++..|+..|. +. .++.++..+....+.-...++... ......++....
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~-~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~---------~~~~~~~~~i~~- 71 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGEL-FGKDQPVVLHLLDIPPAMKALEGVAMELEDC---------AFPLLAGVVATT- 71 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCc-ccCCCccEEEEEecCCcccccchHHHHHhhc---------cccccCCcEEec-
Confidence 45899999999999999999988763 34 688888754321111222221110 000001111111
Q ss_pred CCCCCCCCCCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 111 NLESEHLGLSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 111 D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
.....++++|+||-+||... ..++-.+.++.|......+.+...++
T Consensus 72 ------------~~~~~~~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~ 118 (323)
T TIGR01759 72 ------------DPEEAFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKV 118 (323)
T ss_pred ------------ChHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 11234688999999999753 23566678999999999999988887
No 323
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=97.48 E-value=0.00076 Score=53.47 Aligned_cols=110 Identities=13% Similarity=0.067 Sum_probs=66.9
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+|.|+|++|.+|..++..|+..|. ...|+++++.+..+.+.....++.. .+ ........+.. .
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~-~~~v~lvd~~~~~~~l~~~~~dl~d-----~~----~~~~~~~~i~~---~--- 64 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDV-VKEINLISRPKSLEKLKGLRLDIYD-----AL----AAAGIDAEIKI---S--- 64 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEECcccccccccccchhhh-----ch----hccCCCcEEEE---C---
Confidence 5899999999999999999999874 3468888985421111111111100 00 00000111111 1
Q ss_pred CCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 117 LGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
.+.+ .++++|++|-++|.... .++-.+.++.|+.....+.+...+.
T Consensus 65 -----~d~~-~l~~aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~ 111 (309)
T cd05294 65 -----SDLS-DVAGSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEF 111 (309)
T ss_pred -----CCHH-HhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1123 37899999999996432 2344567888999999998887765
No 324
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=97.43 E-value=0.00063 Score=51.58 Aligned_cols=31 Identities=16% Similarity=0.400 Sum_probs=24.1
Q ss_pred eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489 38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 71 (177)
Q Consensus 38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r 71 (177)
+++=-.++|+||.++++.|.+.| ++|+++++
T Consensus 17 R~itN~SSGgIG~AIA~~la~~G---a~Vvlv~~ 47 (227)
T TIGR02114 17 RSITNHSTGHLGKIITETFLSAG---HEVTLVTT 47 (227)
T ss_pred eeecCCcccHHHHHHHHHHHHCC---CEEEEEcC
Confidence 33334458899999999999999 57877765
No 325
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.42 E-value=0.0018 Score=51.70 Aligned_cols=110 Identities=12% Similarity=0.075 Sum_probs=69.3
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcC-----eEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIG-----AIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS 110 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~-----~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 110 (177)
.++|.|+|++|.+|.+++..|+..|. +. .++.++..+....+.-...++..- ......++....
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~-~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~---------~~~~~~~~~i~~- 70 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEM-FGPDQPVILQLLELPQALKALEGVAMELEDC---------AFPLLAEIVITD- 70 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccc-cCCCCceEEEEEecCCcccccceeehhhhhc---------cccccCceEEec-
Confidence 46899999999999999999988764 34 688888754321111111111000 000001121111
Q ss_pred CCCCCCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 111 NLESEHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 111 D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
.....++++|+||-+||.... .++-.+.++.|+.....+.+...++
T Consensus 71 ------------~~~~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~ 117 (322)
T cd01338 71 ------------DPNVAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDV 117 (322)
T ss_pred ------------CcHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 113446899999999997432 3455678899999999999998887
No 326
>PRK05442 malate dehydrogenase; Provisional
Probab=97.36 E-value=0.0029 Score=50.53 Aligned_cols=108 Identities=12% Similarity=0.087 Sum_probs=69.9
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcC-----eEEEEEeCCCCCChH---HHHHHHHhhhhhhcccccCcccCCCeE
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIG-----AIYIMVRDKKGSSPE---ERVKNMLNSVIFDRLNKEVPDFRSKIQ 106 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~-----~v~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~ 106 (177)
+.++|.|+|++|.+|++++..|+..|. +. .++.++..+....+. ..+.+... ....++.
T Consensus 3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~-~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~------------~~~~~~~ 69 (326)
T PRK05442 3 APVRVAVTGAAGQIGYSLLFRIASGDM-LGKDQPVILQLLEIPPALKALEGVVMELDDCAF------------PLLAGVV 69 (326)
T ss_pred CCcEEEEECCCcHHHHHHHHHHHhhhh-cCCCCccEEEEEecCCcccccceeehhhhhhhh------------hhcCCcE
Confidence 457999999999999999999987663 34 688888754321111 12222110 0001222
Q ss_pred EEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 107 VIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 107 ~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
... ...+.++++|+||-+||... ..++-.+.++.|......+.+...++
T Consensus 70 i~~-------------~~y~~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~ 119 (326)
T PRK05442 70 ITD-------------DPNVAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEV 119 (326)
T ss_pred Eec-------------ChHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 111 11234688999999999643 23566678899999999999988885
No 327
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.33 E-value=0.0053 Score=48.69 Aligned_cols=111 Identities=10% Similarity=0.032 Sum_probs=70.8
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
++|.|+|++|.+|++++..|...|. +..+++++.+ ........+.+ ........... .+
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~-~~elvLiDi~-~a~g~alDL~~----------------~~~~~~i~~~~-~~-- 59 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPL-VSELALYDIV-NTPGVAADLSH----------------INTPAKVTGYL-GP-- 59 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-CcEEEEEecC-ccceeehHhHh----------------CCCcceEEEec-CC--
Confidence 4799999999999999999988764 4578888875 11111011121 11111111100 11
Q ss_pred CCCCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhcCCCCCc
Q psy17489 117 LGLSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKECVNLKRF 174 (177)
Q Consensus 117 ~~~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~ 174 (177)
+++-..++++|+||-+||... ..++-.+.++.|......+.+...++ +.+-+
T Consensus 60 -----~~~y~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~-~p~a~ 112 (310)
T cd01337 60 -----EELKKALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKA-CPKAL 112 (310)
T ss_pred -----CchHHhcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeE
Confidence 123455789999999999743 23456678899999999999888877 44433
No 328
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.23 E-value=0.00097 Score=53.45 Aligned_cols=38 Identities=16% Similarity=0.311 Sum_probs=32.2
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
+++|+|.||+|++|..+++.|.+.|+.+.++..+.+..
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~ 38 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASAR 38 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccc
Confidence 46899999999999999999999877666777777654
No 329
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.11 E-value=0.0065 Score=48.84 Aligned_cols=38 Identities=29% Similarity=0.492 Sum_probs=32.3
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
..+...+|+|.|+ |++|+++++.|...|. .++..++.+
T Consensus 20 ~~L~~~~VlVvG~-GglGs~va~~La~aGv--g~i~lvD~D 57 (339)
T PRK07688 20 QKLREKHVLIIGA-GALGTANAEMLVRAGV--GKVTIVDRD 57 (339)
T ss_pred HHhcCCcEEEECC-CHHHHHHHHHHHHcCC--CeEEEEeCC
Confidence 3467789999995 8999999999999984 788888875
No 330
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.10 E-value=0.0097 Score=47.10 Aligned_cols=105 Identities=11% Similarity=0.152 Sum_probs=66.8
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCC-hHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS-PEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
++|.|.|+ |.+|+.++..|+..|. ..+++++++++.... ....+.+... ........... +
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~-~~ei~l~D~~~~~~~~~a~dL~~~~~------------~~~~~~~i~~~---~- 62 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGI-ADELVLIDINEEKAEGEALDLEDALA------------FLPSPVKIKAG---D- 62 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCcchhhHhHhhHHHHhh------------ccCCCeEEEcC---C-
Confidence 47899995 9999999999998874 237899998753211 1112211110 00112222211 1
Q ss_pred CCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 116 HLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
.. .++++|+||.++|.... .++-.+.++.|..-...+.+..+++
T Consensus 63 --------~~-~l~~aDIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~ 107 (306)
T cd05291 63 --------YS-DCKDADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKAS 107 (306)
T ss_pred --------HH-HhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 12 25789999999997432 3345567899999999999988876
No 331
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.08 E-value=0.00082 Score=45.78 Aligned_cols=35 Identities=23% Similarity=0.590 Sum_probs=28.4
Q ss_pred eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
+|.|+||+|++|..+++.|.+. +.+..+.+.+++.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~h-p~~e~~~~~~~~~ 35 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEH-PDFELVALVSSSR 35 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT-STEEEEEEEESTT
T ss_pred CEEEECCCCHHHHHHHHHHhcC-CCccEEEeeeecc
Confidence 5899999999999999999985 5665566666655
No 332
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=97.07 E-value=0.0033 Score=49.79 Aligned_cols=78 Identities=18% Similarity=0.384 Sum_probs=52.3
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
...++|-||+||.|..++++|...|. +.....|+. .++..+-.. -.++...+++.+ +
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~g~---~~aLAgRs~------~kl~~l~~~------------LG~~~~~~p~~~--p 62 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLAREGL---TAALAGRSS------AKLDALRAS------------LGPEAAVFPLGV--P 62 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHcCC---chhhccCCH------HHHHHHHHh------------cCccccccCCCC--H
Confidence 35799999999999999999999984 445556654 223222111 112233333322 3
Q ss_pred CCCCCHHHHHHHhcCCcEEEEcCcccC
Q psy17489 116 HLGLSEDSEQLIKSKVNIIFHCAASLR 142 (177)
Q Consensus 116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~ 142 (177)
+.++....+..+|+||+|+..
T Consensus 63 ------~~~~~~~~~~~VVlncvGPyt 83 (382)
T COG3268 63 ------AALEAMASRTQVVLNCVGPYT 83 (382)
T ss_pred ------HHHHHHHhcceEEEecccccc
Confidence 678888889999999999864
No 333
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.01 E-value=0.011 Score=46.82 Aligned_cols=110 Identities=10% Similarity=0.127 Sum_probs=69.5
Q ss_pred eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChH-HHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPE-ERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
+|.|.|+ |.+|..++..|+..|. +..++.++..++....+ ..+.+... .. ...++....+|.
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~-~~elvL~Di~~~~a~g~a~DL~~~~~----------~~-~~~~~~i~~~~y---- 63 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGL-FSEIVLIDVNEGVAEGEALDFHHATA----------LT-YSTNTKIRAGDY---- 63 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCcchhhHHHHHHHhhhc----------cC-CCCCEEEEECCH----
Confidence 4789997 9999999999998763 45788888865322111 12222110 00 001333333331
Q ss_pred CCCCHHHHHHHhcCCcEEEEcCcccCc-hHH--HHHHHHHhHHHHHHHHHHHHhcCCCCCc
Q psy17489 117 LGLSEDSEQLIKSKVNIIFHCAASLRF-DEA--LQKAIRANLYATKQMLNLAKECVNLKRF 174 (177)
Q Consensus 117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~--~~~~~~~nv~~~~~ll~~~~~~~~~~~~ 174 (177)
..++++|+||-+||.... .++ -.+.++.|..-...+.+...++ +..-+
T Consensus 64 ---------~~~~~aDivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~-~p~~i 114 (307)
T cd05290 64 ---------DDCADADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKV-TKEAV 114 (307)
T ss_pred ---------HHhCCCCEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHh-CCCeE
Confidence 235789999999997432 233 3568899999999999998887 44433
No 334
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=97.01 E-value=0.01 Score=47.09 Aligned_cols=111 Identities=12% Similarity=0.055 Sum_probs=69.9
Q ss_pred eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCC
Q psy17489 38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHL 117 (177)
Q Consensus 38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 117 (177)
+|.|+|++|.+|++++..|...+. +..++++++.+..... ..+.+ ........... .+
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~-~~elvL~Di~~a~g~a-~DL~~----------------~~~~~~i~~~~-~~--- 58 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPY-VSELSLYDIAGAAGVA-ADLSH----------------IPTAASVKGFS-GE--- 58 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCC-CcEEEEecCCCCcEEE-chhhc----------------CCcCceEEEec-CC---
Confidence 578999999999999999988763 3578888876511100 11111 00111111100 00
Q ss_pred CCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCce
Q psy17489 118 GLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFC 175 (177)
Q Consensus 118 ~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v 175 (177)
+++...++++|+||-+||.... .++-.+.++.|+.-...+.+...++ +.+-++
T Consensus 59 ----~~~~~~~~daDivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~-~p~~ii 112 (312)
T TIGR01772 59 ----EGLENALKGADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAES-CPKAMI 112 (312)
T ss_pred ----CchHHHcCCCCEEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHh-CCCeEE
Confidence 1234567899999999997532 3455668899999999998888877 444333
No 335
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=96.99 E-value=0.014 Score=46.22 Aligned_cols=111 Identities=14% Similarity=0.075 Sum_probs=69.5
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcC-eEEEEEeCCCCCChH-HHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDKKGSSPE-ERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~-~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
++|.|+|+ |.+|+.++..|+.++. . .++.++..+...+.. ..+.+... ....+ ..+.+| .+
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~--~~el~LiDi~~~~~~G~a~DL~~~~~------------~~~~~-~~i~~~-~~ 63 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGL--GSELVLIDINEEKAEGVALDLSHAAA------------PLGSD-VKITGD-GD 63 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccc--cceEEEEEcccccccchhcchhhcch------------hccCc-eEEecC-CC
Confidence 47999999 9999999999987764 4 888888874322111 11111100 00011 122222 11
Q ss_pred CCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCce
Q psy17489 115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFC 175 (177)
Q Consensus 115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v 175 (177)
-..++++|+|+-.||.... .++-.+.++.|..-...+.+...++ ..+-+|
T Consensus 64 ----------y~~~~~aDiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~-~~d~iv 114 (313)
T COG0039 64 ----------YEDLKGADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKY-APDAIV 114 (313)
T ss_pred ----------hhhhcCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCeEE
Confidence 1235788999999987543 3466678899999999998888776 444443
No 336
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.90 E-value=0.021 Score=45.37 Aligned_cols=106 Identities=9% Similarity=0.104 Sum_probs=67.0
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
++|.|+|+ |.+|+.++..|+..|. ...++.++.+++. +.-...++..- ............
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~-~~el~LiD~~~~~--~~g~a~Dl~~~----------~~~~~~~~v~~~------ 63 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGL-ADELVLVDVVEDK--LKGEAMDLQHG----------SAFLKNPKIEAD------ 63 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCccH--HHHHHHHHHHh----------hccCCCCEEEEC------
Confidence 48999996 9999999999988863 4578888876532 11122222110 000011122210
Q ss_pred CCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 117 LGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
.+++. ++++|+||-+||.... .++-.+.++.|+.-...+.+..+++
T Consensus 64 -----~dy~~-~~~adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~ 110 (312)
T cd05293 64 -----KDYSV-TANSKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKY 110 (312)
T ss_pred -----CCHHH-hCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 11232 6899999999997443 3445567899999999898888877
No 337
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.90 E-value=0.0062 Score=50.51 Aligned_cols=73 Identities=16% Similarity=0.323 Sum_probs=52.0
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+++|.|+ |.+|.++++.|.+.| ..|+++++++. .++.... ...+.++.+|..+.
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g---~~v~vid~~~~------~~~~~~~--------------~~~~~~~~gd~~~~- 55 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGEN---NDVTVIDTDEE------RLRRLQD--------------RLDVRTVVGNGSSP- 55 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC---CcEEEEECCHH------HHHHHHh--------------hcCEEEEEeCCCCH-
Confidence 57899986 999999999999988 57888887652 2222111 02467888888876
Q ss_pred CCCCHHHHHHH-hcCCcEEEEcCc
Q psy17489 117 LGLSEDSEQLI-KSKVNIIFHCAA 139 (177)
Q Consensus 117 ~~~~~~~~~~~-~~~~d~vi~~aa 139 (177)
..+..+ ++++|.+|-+..
T Consensus 56 -----~~l~~~~~~~a~~vi~~~~ 74 (453)
T PRK09496 56 -----DVLREAGAEDADLLIAVTD 74 (453)
T ss_pred -----HHHHHcCCCcCCEEEEecC
Confidence 566666 667888777654
No 338
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=96.88 E-value=0.018 Score=52.55 Aligned_cols=79 Identities=11% Similarity=0.161 Sum_probs=55.5
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcC------------eEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIG------------AIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFR 102 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~------------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (177)
.+++|+|.|+ |++|+..++.|.+.. ++. .|.+.+++. +..+.+.+ ..
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~-~~~~~~~~~~~~~~~lV~VaD~~~------~~a~~la~-------------~~ 626 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVK-TISYYGDDSEEPTDVHVIVASLYL------KDAKETVE-------------GI 626 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCc-CccccccccccccccEEEEECCCH------HHHHHHHH-------------hc
Confidence 4678999995 999999999998753 221 355555543 22222111 11
Q ss_pred CCeEEEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcc
Q psy17489 103 SKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAAS 140 (177)
Q Consensus 103 ~~v~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~ 140 (177)
+++..+..|+.|. +++..+++++|+||.+...
T Consensus 627 ~~~~~v~lDv~D~------e~L~~~v~~~DaVIsalP~ 658 (1042)
T PLN02819 627 ENAEAVQLDVSDS------ESLLKYVSQVDVVISLLPA 658 (1042)
T ss_pred CCCceEEeecCCH------HHHHHhhcCCCEEEECCCc
Confidence 3567889999988 7888888899999999876
No 339
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.84 E-value=0.015 Score=43.17 Aligned_cols=38 Identities=24% Similarity=0.262 Sum_probs=32.3
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
..+...+|+|.| .|.+|+++++.|...|. .+++.++.+
T Consensus 17 ~kl~~~~VlviG-~GglGs~ia~~La~~Gv--~~i~lvD~d 54 (202)
T TIGR02356 17 QRLLNSHVLIIG-AGGLGSPAALYLAGAGV--GTIVIVDDD 54 (202)
T ss_pred HHhcCCCEEEEC-CCHHHHHHHHHHHHcCC--CeEEEecCC
Confidence 346778999999 78899999999999984 788888876
No 340
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=96.83 E-value=0.023 Score=47.27 Aligned_cols=107 Identities=12% Similarity=0.017 Sum_probs=69.1
Q ss_pred CCceEEEecCCcchHHHHHHHHHhh-------CCCcCeEEEEEeCCCCCChH-HHHHHHHhhhhhhcccccCcccCCCeE
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRS-------FPDIGAIYIMVRDKKGSSPE-ERVKNMLNSVIFDRLNKEVPDFRSKIQ 106 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~-------g~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~ 106 (177)
+.-+|.|+|++|.+|.+++..|+.. |. +.+++.++++++....+ ..+.+... ....++.
T Consensus 99 ~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i-~~eLvliD~~~~~a~G~amDL~daa~------------~~~~~v~ 165 (444)
T PLN00112 99 KLINVAVSGAAGMISNHLLFKLASGEVFGPDQPI-ALKLLGSERSKQALEGVAMELEDSLY------------PLLREVS 165 (444)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhcccccCCCCc-ccEEEEEcCCcchhHHHHHHHHHhhh------------hhcCceE
Confidence 3458999999999999999999877 42 23678887765432211 12222110 0011222
Q ss_pred EEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489 107 VIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKE 167 (177)
Q Consensus 107 ~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~ 167 (177)
+...| -..++++|+||-.||... ..++-.+.++.|+.....+.+...+
T Consensus 166 i~~~~-------------ye~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~ 214 (444)
T PLN00112 166 IGIDP-------------YEVFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNE 214 (444)
T ss_pred EecCC-------------HHHhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 22221 234688999999999743 2345667889999999999998888
No 341
>PTZ00117 malate dehydrogenase; Provisional
Probab=96.82 E-value=0.018 Score=45.93 Aligned_cols=108 Identities=15% Similarity=0.186 Sum_probs=66.2
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
+.++|.|+|| |.+|+.++..+...|. ..++.++.++....... + ++.. .... ......... .
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~--~~l~L~Di~~~~~~g~~-l-Dl~~---~~~~------~~~~~~i~~---~- 65 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNL--GDVVLYDVIKGVPQGKA-L-DLKH---FSTL------VGSNINILG---T- 65 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCC--CeEEEEECCCccchhHH-H-HHhh---hccc------cCCCeEEEe---C-
Confidence 4568999996 9999999999988774 57888888764322111 1 1100 0000 001111111 0
Q ss_pred CCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
.+++ .++++|+||.+++.... .++..+.+..|..-...+.+...+.
T Consensus 66 -------~d~~-~l~~ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~ 112 (319)
T PTZ00117 66 -------NNYE-DIKDSDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKY 112 (319)
T ss_pred -------CCHH-HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1234 56899999999986442 2344567788887777777777765
No 342
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.77 E-value=0.0074 Score=43.62 Aligned_cols=39 Identities=18% Similarity=0.226 Sum_probs=33.3
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
..+++++++|.|+++.+|..+++.|.+.| .+|+...|+.
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g---~~V~v~~r~~ 78 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRN---ATVTVCHSKT 78 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCC---CEEEEEECCc
Confidence 45789999999997788999999999988 4788888763
No 343
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.69 E-value=0.007 Score=48.62 Aligned_cols=96 Identities=20% Similarity=0.244 Sum_probs=55.7
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCC--------ChHHHHH--HHHhhhhhhcccccCccc
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS--------SPEERVK--NMLNSVIFDRLNKEVPDF 101 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~--------~~~~~~~--~~~~~~~~~~~~~~~~~~ 101 (177)
..++.++|+|.|+ |.+|+++++.|...|. .++.+++++.-.. ..++.+. ........+++.+. . .
T Consensus 20 ~~L~~~~VlIiG~-GglGs~va~~La~aGv--g~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~i-n-p 94 (338)
T PRK12475 20 RKIREKHVLIVGA-GALGAANAEALVRAGI--GKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKI-N-S 94 (338)
T ss_pred HhhcCCcEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHH-C-C
Confidence 3467789999995 6699999999999984 6888888763110 0000000 00000001111110 1 1
Q ss_pred CCCeEEEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCc
Q psy17489 102 RSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAA 139 (177)
Q Consensus 102 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa 139 (177)
.-++..+..|++. +.+..+++++|+||.+..
T Consensus 95 ~v~i~~~~~~~~~-------~~~~~~~~~~DlVid~~D 125 (338)
T PRK12475 95 EVEIVPVVTDVTV-------EELEELVKEVDLIIDATD 125 (338)
T ss_pred CcEEEEEeccCCH-------HHHHHHhcCCCEEEEcCC
Confidence 1345556666653 456777889999999865
No 344
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.67 E-value=0.0083 Score=47.00 Aligned_cols=36 Identities=19% Similarity=0.243 Sum_probs=31.7
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 71 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r 71 (177)
.++|++++|.|++|.+|+.++..|++.| .+|+++.|
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~g---atVtv~~~ 191 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNAN---ATVTICHS 191 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCC---CEEEEEeC
Confidence 4689999999999999999999999987 57777666
No 345
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.61 E-value=0.013 Score=44.30 Aligned_cols=75 Identities=19% Similarity=0.298 Sum_probs=54.9
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+++|.| .|-+|.++++.|.+.| +.|+.+++++ ++..+... .......+.+|-+++
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g---~~Vv~Id~d~------~~~~~~~~-------------~~~~~~~v~gd~t~~- 56 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEG---HNVVLIDRDE------ERVEEFLA-------------DELDTHVVIGDATDE- 56 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCC---CceEEEEcCH------HHHHHHhh-------------hhcceEEEEecCCCH-
Confidence 4677777 7889999999999999 5888888875 33332111 113567889999998
Q ss_pred CCCCHHHHHHH-hcCCcEEEEcCcc
Q psy17489 117 LGLSEDSEQLI-KSKVNIIFHCAAS 140 (177)
Q Consensus 117 ~~~~~~~~~~~-~~~~d~vi~~aa~ 140 (177)
+.++++ +.++|+++-.-+.
T Consensus 57 -----~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 57 -----DVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred -----HHHHhcCCCcCCEEEEeeCC
Confidence 667776 5688999887664
No 346
>PLN02602 lactate dehydrogenase
Probab=96.59 E-value=0.054 Score=43.76 Aligned_cols=104 Identities=9% Similarity=0.155 Sum_probs=66.8
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCCh-HHHHHHHHhhhhhhcccccCcccCCCeEEEe-CCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSP-EERVKNMLNSVIFDRLNKEVPDFRSKIQVIP-SNLES 114 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~D~~~ 114 (177)
++|.|+|+ |.+|++++..|+..|. ...++.++.+++.... ...+.+... ......+.. .|
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l-~~el~LiDi~~~~~~g~a~DL~~~~~-------------~~~~~~i~~~~d--- 99 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDL-ADELALVDVNPDKLRGEMLDLQHAAA-------------FLPRTKILASTD--- 99 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCCchhhHHHHHHHhhhh-------------cCCCCEEEeCCC---
Confidence 69999996 9999999999988764 4578888886532111 112222110 011122221 12
Q ss_pred CCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
++ .++++|+||-+||.... .++-.+.+..|+.-...+.+..+++
T Consensus 100 ---------y~-~~~daDiVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~ 144 (350)
T PLN02602 100 ---------YA-VTAGSDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKY 144 (350)
T ss_pred ---------HH-HhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 26889999999997432 2345567888999988888888776
No 347
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=96.57 E-value=0.035 Score=42.91 Aligned_cols=106 Identities=14% Similarity=0.094 Sum_probs=65.8
Q ss_pred EEEecCCcchHHHHHHHHHhhCC-CcCeEEEEEeCCCCCC-hHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 39 ILVTGGTGFMGKLLIDKLLRSFP-DIGAIYIMVRDKKGSS-PEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 39 vlVtG~~G~iG~~l~~~L~~~g~-~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
+.|+|++|.+|..++..|+..|. ...+++.++.++.... ....+.+.... . ....+.. +
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~------------~-~~~~i~~---~--- 61 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEP------------L-ADIKVSI---T--- 61 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhh------------c-cCcEEEE---C---
Confidence 47999989999999999998761 2358888888663322 11222222110 0 0111111 1
Q ss_pred CCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 117 LGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
.+....++++|+||..++.... .++.......|+.....+.+..++.
T Consensus 62 -----~d~~~~~~~aDiVv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~ 109 (263)
T cd00650 62 -----DDPYEAFKDADVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKY 109 (263)
T ss_pred -----CchHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2245567899999999987543 2233446677888888888887765
No 348
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.56 E-value=0.011 Score=47.50 Aligned_cols=36 Identities=25% Similarity=0.361 Sum_probs=29.4
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 71 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r 71 (177)
+++|.|+||||++|..+++.|.+.++.+..+..+..
T Consensus 4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s 39 (336)
T PRK05671 4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLAS 39 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEEC
Confidence 368999999999999999999987666666666544
No 349
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=96.55 E-value=0.039 Score=45.13 Aligned_cols=109 Identities=13% Similarity=0.088 Sum_probs=66.1
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcC-----eEEEE--EeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEE
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIG-----AIYIM--VRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQV 107 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~-----~v~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 107 (177)
+.-+|.|+|++|.+|++++..|+..|. +. .++.+ +++.+. ++-...++... ......++..
T Consensus 43 ~p~KV~IIGAaG~VG~~~A~~l~~~~l-~~~~~ei~L~L~diD~~~~~--a~g~a~DL~d~---------a~~~~~~v~i 110 (387)
T TIGR01757 43 KTVNVAVSGAAGMISNHLLFMLASGEV-FGQDQPIALKLLGSERSKEA--LEGVAMELEDS---------LYPLLREVSI 110 (387)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhccc-cCCCCceEEEEeccCccchh--hhHHHHHHHHh---------hhhhcCceEE
Confidence 356899999999999999999998764 22 12222 443321 22222222110 0000112222
Q ss_pred EeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 108 IPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 108 ~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
...| -..++++|+||-.||.... .++-.+.++.|+.....+.+...++
T Consensus 111 ~~~~-------------y~~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~ 159 (387)
T TIGR01757 111 GIDP-------------YEVFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAV 159 (387)
T ss_pred ecCC-------------HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 2211 2346899999999997432 3456678899999999999988885
No 350
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.50 E-value=0.03 Score=41.65 Aligned_cols=39 Identities=15% Similarity=0.191 Sum_probs=32.1
Q ss_pred ccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 30 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 30 ~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
++-.+++++++|.|| |-+|...++.|++.| ++|+++++.
T Consensus 4 l~l~l~~k~vLVIGg-G~va~~ka~~Ll~~g---a~V~VIs~~ 42 (202)
T PRK06718 4 LMIDLSNKRVVIVGG-GKVAGRRAITLLKYG---AHIVVISPE 42 (202)
T ss_pred eEEEcCCCEEEEECC-CHHHHHHHHHHHHCC---CeEEEEcCC
Confidence 344578999999995 899999999999998 577777653
No 351
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.47 E-value=0.025 Score=46.89 Aligned_cols=36 Identities=17% Similarity=0.159 Sum_probs=31.3
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
+++++++|+|++| +|..+++.|.+.| ++|++.+++.
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G---~~V~~~d~~~ 38 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKLG---ANVTVNDGKP 38 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHCC---CEEEEEcCCC
Confidence 4688999999988 9999999999999 6888887654
No 352
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=96.47 E-value=0.0059 Score=49.08 Aligned_cols=36 Identities=19% Similarity=0.396 Sum_probs=29.2
Q ss_pred eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
+|.|.||+|++|..+++.|.+.++.+..+..+.+..
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~ 36 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDR 36 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccc
Confidence 478999999999999999998877666666665543
No 353
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.47 E-value=0.042 Score=43.58 Aligned_cols=105 Identities=12% Similarity=0.162 Sum_probs=65.7
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
|+|.|.|+ |.+|..++..|+..|. +..|+++++++.... ....++... ............
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~-~~ev~l~D~~~~~~~--g~a~dl~~~----------~~~~~~~~i~~~------ 60 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGL-ASEIVLVDINKAKAE--GEAMDLAHG----------TPFVKPVRIYAG------ 60 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCC-CCEEEEEECCchhhh--hHHHHHHcc----------ccccCCeEEeeC------
Confidence 47899997 9999999999999873 357888888653211 111111110 000011111111
Q ss_pred CCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 117 LGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
.+ ..++++|++|-+++.... .++..+....|+.....+.+.++++
T Consensus 61 ------d~-~~l~~aDiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~ 106 (308)
T cd05292 61 ------DY-ADCKGADVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKY 106 (308)
T ss_pred ------CH-HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 12 236899999999996432 3445567888988888888887776
No 354
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.46 E-value=0.015 Score=45.52 Aligned_cols=37 Identities=16% Similarity=0.231 Sum_probs=32.4
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
.++|++++|+|+++.+|..++..|.+.| ++|+++.++
T Consensus 155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~g---atVtv~~s~ 191 (286)
T PRK14175 155 DLEGKNAVVIGRSHIVGQPVSKLLLQKN---ASVTILHSR 191 (286)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCC---CeEEEEeCC
Confidence 4789999999999999999999999988 677777654
No 355
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=96.46 E-value=0.13 Score=35.53 Aligned_cols=93 Identities=22% Similarity=0.344 Sum_probs=52.9
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC-----CCC---hHHHHHHHHhhhhhhcccccCcccCCCeEE
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK-----GSS---PEERVKNMLNSVIFDRLNKEVPDFRSKIQV 107 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 107 (177)
.++|+|.| .|.+|+.+++.|...|. .++..++.+.- ... ..+.+-....+...+++.+.. ...++..
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~~Gv--~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~n--p~~~v~~ 76 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLARSGV--GKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEIN--PDVEVEA 76 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHHTT--SEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHS--TTSEEEE
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHhCC--CceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhc--Cceeeee
Confidence 46899998 68899999999999984 78888876410 000 000000000000111111111 1234566
Q ss_pred EeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcc
Q psy17489 108 IPSNLESEHLGLSEDSEQLIKSKVNIIFHCAAS 140 (177)
Q Consensus 108 ~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~ 140 (177)
+..++.. +.....++++|+||.+...
T Consensus 77 ~~~~~~~-------~~~~~~~~~~d~vi~~~d~ 102 (135)
T PF00899_consen 77 IPEKIDE-------ENIEELLKDYDIVIDCVDS 102 (135)
T ss_dssp EESHCSH-------HHHHHHHHTSSEEEEESSS
T ss_pred eeccccc-------ccccccccCCCEEEEecCC
Confidence 6666633 5677778899999998664
No 356
>PRK08223 hypothetical protein; Validated
Probab=96.41 E-value=0.043 Score=43.00 Aligned_cols=96 Identities=14% Similarity=0.134 Sum_probs=55.6
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCC-----C---hHHHHHHHHhhhhhhcccccCcccCC
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS-----S---PEERVKNMLNSVIFDRLNKEVPDFRS 103 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (177)
..++..+|+|.| .|++|+++++.|...|. .++..++.+.-.. + ..+.+-+...+...+++.+. + ..-
T Consensus 23 ~kL~~s~VlIvG-~GGLGs~va~~LA~aGV--G~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~i-N-P~v 97 (287)
T PRK08223 23 QRLRNSRVAIAG-LGGVGGIHLLTLARLGI--GKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDI-N-PEL 97 (287)
T ss_pred HHHhcCCEEEEC-CCHHHHHHHHHHHHhCC--CeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHH-C-CCC
Confidence 346778999999 67799999999999984 7888887652110 0 01111111111111122111 1 113
Q ss_pred CeEEEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCc
Q psy17489 104 KIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAA 139 (177)
Q Consensus 104 ~v~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa 139 (177)
+++.+...++. +....+++++|+|+.+.-
T Consensus 98 ~V~~~~~~l~~-------~n~~~ll~~~DlVvD~~D 126 (287)
T PRK08223 98 EIRAFPEGIGK-------ENADAFLDGVDVYVDGLD 126 (287)
T ss_pred EEEEEecccCc-------cCHHHHHhCCCEEEECCC
Confidence 45555555554 346777889999997754
No 357
>PRK06223 malate dehydrogenase; Reviewed
Probab=96.40 E-value=0.047 Score=43.12 Aligned_cols=107 Identities=12% Similarity=0.083 Sum_probs=62.9
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE 115 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 115 (177)
+++|.|+|+ |.+|..++..+...|. ..|++.++++...+ ....++... . ........... +
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~--~ev~L~D~~~~~~~--~~~~dl~~~-~--------~~~~~~~~i~~---~-- 62 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKEL--GDVVLFDIVEGVPQ--GKALDIAEA-A--------PVEGFDTKITG---T-- 62 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC--eEEEEEECCCchhH--HHHHHHHhh-h--------hhcCCCcEEEe---C--
Confidence 479999998 9999999999998874 28888888654321 111111110 0 00000111111 0
Q ss_pred CCCCCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 116 HLGLSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
.+++ .++++|+||.+++... ...+-.+.+.-|+.....+.+...+.
T Consensus 63 ------~d~~-~~~~aDiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~ 109 (307)
T PRK06223 63 ------NDYE-DIAGSDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKY 109 (307)
T ss_pred ------CCHH-HHCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1232 3689999999987533 22333455677777777777776665
No 358
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.39 E-value=0.047 Score=44.50 Aligned_cols=37 Identities=22% Similarity=0.232 Sum_probs=31.3
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
.+.+++|+|.| .|++|++++..|...|. .+++.++++
T Consensus 132 ~l~~~~VlvvG-~GG~Gs~ia~~La~~Gv--g~i~lvD~d 168 (376)
T PRK08762 132 RLLEARVLLIG-AGGLGSPAALYLAAAGV--GTLGIVDHD 168 (376)
T ss_pred HHhcCcEEEEC-CCHHHHHHHHHHHHcCC--CeEEEEeCC
Confidence 46778899997 57899999999999984 788888875
No 359
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.38 E-value=0.019 Score=40.37 Aligned_cols=37 Identities=19% Similarity=0.216 Sum_probs=30.7
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
.++++++|+|+ |.+|..+++.|.+.| ...|++.+|+.
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g--~~~v~v~~r~~ 53 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELG--AAKIVIVNRTL 53 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCC--CCEEEEEcCCH
Confidence 45789999997 899999999999885 25788888764
No 360
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.33 E-value=0.067 Score=44.59 Aligned_cols=113 Identities=14% Similarity=0.024 Sum_probs=67.1
Q ss_pred CCCceEEEecCCcchHHHHHHHHHh---hCCCc-CeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEe
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLR---SFPDI-GAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP 109 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~---~g~~~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 109 (177)
.+.-+|+||||+|.||.+|+..+.+ .|.+. -.++.++..+....++-..-++..- . .....++....
T Consensus 121 ~~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~-a--------~pll~~v~i~~ 191 (452)
T cd05295 121 INPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDL-A--------FPLLRGISVTT 191 (452)
T ss_pred CCceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHh-H--------HhhcCCcEEEE
Confidence 3456899999999999999999986 23221 1344444432222222222222110 0 00011222221
Q ss_pred CCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 110 SNLESEHLGLSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 110 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
+ ....++++|++|-.||... ..++-.+.++.|...+..+.+...++
T Consensus 192 ----~---------~~ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~ 238 (452)
T cd05295 192 ----D---------LDVAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKN 238 (452)
T ss_pred ----C---------CHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 1345789999999999743 23455668899999999998888876
No 361
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=96.30 E-value=0.02 Score=43.94 Aligned_cols=38 Identities=21% Similarity=0.234 Sum_probs=32.1
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
..++..+|+|.|+ |++|+.+++.|...|. .++..++.+
T Consensus 28 ~~L~~~~VliiG~-GglGs~va~~La~~Gv--g~i~lvD~D 65 (245)
T PRK05690 28 EKLKAARVLVVGL-GGLGCAASQYLAAAGV--GTLTLVDFD 65 (245)
T ss_pred HHhcCCeEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcCC
Confidence 3567889999997 9999999999999884 788888765
No 362
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.28 E-value=0.042 Score=36.63 Aligned_cols=70 Identities=17% Similarity=0.286 Sum_probs=49.6
Q ss_pred EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489 39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG 118 (177)
Q Consensus 39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 118 (177)
++|.|. |-+|..+++.|.+.+ ..|+++++++ +..+.... ..+.++.+|.+++
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~---~~vvvid~d~------~~~~~~~~---------------~~~~~i~gd~~~~--- 52 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGG---IDVVVIDRDP------ERVEELRE---------------EGVEVIYGDATDP--- 52 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTT---SEEEEEESSH------HHHHHHHH---------------TTSEEEES-TTSH---
T ss_pred eEEEcC-CHHHHHHHHHHHhCC---CEEEEEECCc------HHHHHHHh---------------cccccccccchhh---
Confidence 567775 679999999999965 5888888865 33333322 3478999999998
Q ss_pred CCHHHHHHH-hcCCcEEEEcCc
Q psy17489 119 LSEDSEQLI-KSKVNIIFHCAA 139 (177)
Q Consensus 119 ~~~~~~~~~-~~~~d~vi~~aa 139 (177)
+.++++ +++++.++-+..
T Consensus 53 ---~~l~~a~i~~a~~vv~~~~ 71 (116)
T PF02254_consen 53 ---EVLERAGIEKADAVVILTD 71 (116)
T ss_dssp ---HHHHHTTGGCESEEEEESS
T ss_pred ---hHHhhcCccccCEEEEccC
Confidence 666664 457888887755
No 363
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=96.27 E-value=0.0097 Score=48.58 Aligned_cols=37 Identities=30% Similarity=0.504 Sum_probs=30.0
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
+.++|.|.||+|++|..+++.|.++ +. .++..+.++.
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~h-P~-~el~~l~s~~ 73 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANH-PD-FEITVMTADR 73 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhC-CC-CeEEEEEChh
Confidence 4568999999999999999999887 22 5777777643
No 364
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=96.27 E-value=0.0094 Score=44.30 Aligned_cols=95 Identities=12% Similarity=0.169 Sum_probs=54.9
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC---CCCCCh----HHHHHHHHhhhhhhcccccCcccCCC
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD---KKGSSP----EERVKNMLNSVIFDRLNKEVPDFRSK 104 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (177)
..+..++|+|.|+ |.+|+.+++.|...|. .+++..+.+ ...... .+.+-+.......+++.+.-+ ..+
T Consensus 17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gv--g~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp--~~~ 91 (200)
T TIGR02354 17 QKLEQATVAICGL-GGLGSNVAINLARAGI--GKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINP--YTE 91 (200)
T ss_pred HHHhCCcEEEECc-CHHHHHHHHHHHHcCC--CEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCC--CCE
Confidence 4467789999995 7799999999999984 678888876 221111 011110001111111111111 123
Q ss_pred eEEEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcC
Q psy17489 105 IQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCA 138 (177)
Q Consensus 105 v~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a 138 (177)
+..+..+++. +.+..+++++|+||.+.
T Consensus 92 i~~~~~~i~~-------~~~~~~~~~~DlVi~a~ 118 (200)
T TIGR02354 92 IEAYDEKITE-------ENIDKFFKDADIVCEAF 118 (200)
T ss_pred EEEeeeeCCH-------hHHHHHhcCCCEEEECC
Confidence 4445555543 45677788999999983
No 365
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=96.27 E-value=0.044 Score=41.92 Aligned_cols=39 Identities=18% Similarity=0.263 Sum_probs=32.1
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
..+++.+|+|.| .|++|+.+++.|...|. .+++.++.+.
T Consensus 20 ~~L~~~~VlvvG-~GglGs~va~~La~~Gv--g~i~lvD~D~ 58 (240)
T TIGR02355 20 EALKASRVLIVG-LGGLGCAASQYLAAAGV--GNLTLLDFDT 58 (240)
T ss_pred HHHhCCcEEEEC-cCHHHHHHHHHHHHcCC--CEEEEEeCCc
Confidence 346678999998 67899999999999884 7888887753
No 366
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=96.23 E-value=0.016 Score=46.68 Aligned_cols=36 Identities=14% Similarity=0.226 Sum_probs=29.2
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 71 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r 71 (177)
.++|.|.||+|++|..+++.|.+.++.+..+..+..
T Consensus 7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las 42 (344)
T PLN02383 7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLAS 42 (344)
T ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEc
Confidence 468999999999999999999987765556655543
No 367
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=96.18 E-value=0.038 Score=43.42 Aligned_cols=38 Identities=11% Similarity=0.057 Sum_probs=30.9
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 74 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~ 74 (177)
..+++++|.|+ |+.+++++..|...|. .+|++.+|+..
T Consensus 122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~--~~i~i~nRt~~ 159 (288)
T PRK12749 122 IKGKTMVLLGA-GGASTAIGAQGAIEGL--KEIKLFNRRDE 159 (288)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCcc
Confidence 46789999996 4458999999998874 78999999753
No 368
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.17 E-value=0.075 Score=43.02 Aligned_cols=38 Identities=26% Similarity=0.259 Sum_probs=31.8
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
..++..+|+|.|+ |++|+++++.|...|. .++..++.+
T Consensus 24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gv--g~i~lvD~D 61 (355)
T PRK05597 24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGV--GHITIIDDD 61 (355)
T ss_pred HHHhCCeEEEECC-CHHHHHHHHHHHHcCC--CeEEEEeCC
Confidence 3467789999995 8899999999999884 788888775
No 369
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.12 E-value=0.033 Score=39.93 Aligned_cols=36 Identities=22% Similarity=0.250 Sum_probs=28.3
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 71 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r 71 (177)
.++||+++|.|.+..+|..++..|.++| ..|.....
T Consensus 33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~---atVt~~h~ 68 (160)
T PF02882_consen 33 DLEGKKVVVVGRSNIVGKPLAMLLLNKG---ATVTICHS 68 (160)
T ss_dssp STTT-EEEEE-TTTTTHHHHHHHHHHTT----EEEEE-T
T ss_pred CCCCCEEEEECCcCCCChHHHHHHHhCC---CeEEeccC
Confidence 4789999999999999999999999998 67766544
No 370
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=96.10 E-value=0.19 Score=40.07 Aligned_cols=109 Identities=12% Similarity=0.096 Sum_probs=65.8
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
.+.++|.|+| .|.+|+.++..++..|. ..++.++.++..... ...+.... . ........+...
T Consensus 4 ~~~~KI~IIG-aG~vG~~ia~~la~~gl--~~i~LvDi~~~~~~~--~~ld~~~~--~-------~~~~~~~~I~~~--- 66 (321)
T PTZ00082 4 IKRRKISLIG-SGNIGGVMAYLIVLKNL--GDVVLFDIVKNIPQG--KALDISHS--N-------VIAGSNSKVIGT--- 66 (321)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCCC--CeEEEEeCCCchhhH--HHHHHHhh--h-------hccCCCeEEEEC---
Confidence 4557999999 59999999999988874 468888887653211 11111100 0 000011222210
Q ss_pred CCCCCCCHHHHHHHhcCCcEEEEcCcccCc-hH-----HHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRF-DE-----ALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~-----~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
.+++ .++++|+||.+++.... .+ +..+.+..|+.-...+.+...+.
T Consensus 67 --------~d~~-~l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~ 118 (321)
T PTZ00082 67 --------NNYE-DIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKY 118 (321)
T ss_pred --------CCHH-HhCCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122 46899999999986432 12 34556777888777777777765
No 371
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=96.09 E-value=0.14 Score=37.92 Aligned_cols=37 Identities=27% Similarity=0.375 Sum_probs=30.7
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
.++..+|+|.|++| +|.++++.|...|. .++..++.+
T Consensus 18 ~L~~s~VlIiG~gg-lG~evak~La~~GV--g~i~lvD~d 54 (197)
T cd01492 18 RLRSARILLIGLKG-LGAEIAKNLVLSGI--GSLTILDDR 54 (197)
T ss_pred HHHhCcEEEEcCCH-HHHHHHHHHHHcCC--CEEEEEECC
Confidence 45678999998665 99999999999984 788888765
No 372
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=96.09 E-value=0.055 Score=42.48 Aligned_cols=37 Identities=14% Similarity=0.199 Sum_probs=32.1
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
.+.+++++|+|. |.+|..+++.|...| .+|++.+|+.
T Consensus 148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G---~~V~v~~R~~ 184 (287)
T TIGR02853 148 TIHGSNVMVLGF-GRTGMTIARTFSALG---ARVFVGARSS 184 (287)
T ss_pred CCCCCEEEEEcC-hHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence 567899999996 779999999999988 5888888865
No 373
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=96.07 E-value=0.024 Score=42.91 Aligned_cols=38 Identities=21% Similarity=0.338 Sum_probs=31.2
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
..+...+|+|.| .|.+|+++++.|...|. .+++.++.+
T Consensus 17 ~~L~~~~VlivG-~GglGs~va~~La~~Gv--g~i~lvD~D 54 (228)
T cd00757 17 EKLKNARVLVVG-AGGLGSPAAEYLAAAGV--GKLGLVDDD 54 (228)
T ss_pred HHHhCCcEEEEC-CCHHHHHHHHHHHHcCC--CEEEEEcCC
Confidence 346678999999 78899999999999984 788877654
No 374
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=96.05 E-value=0.027 Score=42.23 Aligned_cols=38 Identities=21% Similarity=0.295 Sum_probs=31.9
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
..+...+|+|.| .|.+|+.+++.|...|. .+++.++.+
T Consensus 24 ~~L~~~~V~ViG-~GglGs~ia~~La~~Gv--g~i~lvD~D 61 (212)
T PRK08644 24 EKLKKAKVGIAG-AGGLGSNIAVALARSGV--GNLKLVDFD 61 (212)
T ss_pred HHHhCCCEEEEC-cCHHHHHHHHHHHHcCC--CeEEEEeCC
Confidence 346778999999 58899999999999984 678888776
No 375
>KOG1494|consensus
Probab=96.04 E-value=0.097 Score=40.81 Aligned_cols=102 Identities=16% Similarity=0.162 Sum_probs=66.3
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
.+.+|.|.||.|+||+.|...| +..+-+......+-.... -+..|++.
T Consensus 27 ~~~KVAvlGAaGGIGQPLSLLl-K~np~Vs~LaLYDi~~~~-------------------------------GVaaDlSH 74 (345)
T KOG1494|consen 27 RGLKVAVLGAAGGIGQPLSLLL-KLNPLVSELALYDIANTP-------------------------------GVAADLSH 74 (345)
T ss_pred CcceEEEEecCCccCccHHHHH-hcCcccceeeeeecccCC-------------------------------cccccccc
Confidence 5679999999999999876555 444545444444432211 11122211
Q ss_pred CC-----CC-CCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 115 EH-----LG-LSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 115 ~~-----~~-~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
.. .+ ...+.++.+++++|+|+=-||.-. ...+-++.|.+|.--...+..++.++
T Consensus 75 I~T~s~V~g~~g~~~L~~al~~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~ 135 (345)
T KOG1494|consen 75 INTNSSVVGFTGADGLENALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKC 135 (345)
T ss_pred cCCCCceeccCChhHHHHHhcCCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhh
Confidence 10 11 123688999999999999999754 23456678999988888888777665
No 376
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=96.03 E-value=0.09 Score=36.60 Aligned_cols=32 Identities=31% Similarity=0.360 Sum_probs=26.9
Q ss_pred eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
+++|.|+ |.+|+.+++.|...|. .++..++.+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv--~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGV--GKITLIDFD 32 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCC--CEEEEEcCC
Confidence 4788985 8999999999999985 678888764
No 377
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=95.98 E-value=0.064 Score=44.49 Aligned_cols=76 Identities=14% Similarity=0.206 Sum_probs=52.4
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
..++++|.|+ |.+|..+++.|.+.| ..|+++++++ +.+.++.. ....+.++.+|.++
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~~---~~v~vid~~~------~~~~~~~~-------------~~~~~~~i~gd~~~ 286 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKEG---YSVKLIERDP------ERAEELAE-------------ELPNTLVLHGDGTD 286 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCC---CeEEEEECCH------HHHHHHHH-------------HCCCCeEEECCCCC
Confidence 4688999996 999999999999988 5788887765 22322211 11356788899887
Q ss_pred CCCCCCHHHHHHH-hcCCcEEEEcCc
Q psy17489 115 EHLGLSEDSEQLI-KSKVNIIFHCAA 139 (177)
Q Consensus 115 ~~~~~~~~~~~~~-~~~~d~vi~~aa 139 (177)
. +.+.++ +++++.+|-+..
T Consensus 287 ~------~~L~~~~~~~a~~vi~~~~ 306 (453)
T PRK09496 287 Q------ELLEEEGIDEADAFIALTN 306 (453)
T ss_pred H------HHHHhcCCccCCEEEECCC
Confidence 7 455443 357788775544
No 378
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=95.96 E-value=0.04 Score=45.52 Aligned_cols=39 Identities=26% Similarity=0.395 Sum_probs=33.0
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
..+.+++++|.|+ |.+|..++..|...|. ..+++..|+.
T Consensus 177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~--~~I~V~nRt~ 215 (414)
T PRK13940 177 DNISSKNVLIIGA-GQTGELLFRHVTALAP--KQIMLANRTI 215 (414)
T ss_pred cCccCCEEEEEcC-cHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 3467899999996 9999999999999874 6888888874
No 379
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=95.94 E-value=0.044 Score=40.63 Aligned_cols=37 Identities=19% Similarity=0.296 Sum_probs=31.0
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
.++..+|+|.|++| +|..+++.|...|. .+++.++.+
T Consensus 16 ~L~~s~VlviG~gg-lGsevak~L~~~GV--g~i~lvD~d 52 (198)
T cd01485 16 KLRSAKVLIIGAGA-LGAEIAKNLVLAGI--DSITIVDHR 52 (198)
T ss_pred HHhhCcEEEECCCH-HHHHHHHHHHHcCC--CEEEEEECC
Confidence 35678999999776 99999999999984 788888765
No 380
>PRK04148 hypothetical protein; Provisional
Probab=95.93 E-value=0.092 Score=36.45 Aligned_cols=72 Identities=15% Similarity=0.147 Sum_probs=50.6
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
+++++++.|.+ .|.+++..|.+.| ..|++++.++. .+..... ..+..+.+|+.+
T Consensus 16 ~~~kileIG~G--fG~~vA~~L~~~G---~~ViaIDi~~~------aV~~a~~---------------~~~~~v~dDlf~ 69 (134)
T PRK04148 16 KNKKIVELGIG--FYFKVAKKLKESG---FDVIVIDINEK------AVEKAKK---------------LGLNAFVDDLFN 69 (134)
T ss_pred cCCEEEEEEec--CCHHHHHHHHHCC---CEEEEEECCHH------HHHHHHH---------------hCCeEEECcCCC
Confidence 45789999955 7888999999998 69999998763 2222111 246789999999
Q ss_pred CCCCCCHHHHHHHhcCCcEEEEcCcc
Q psy17489 115 EHLGLSEDSEQLIKSKVNIIFHCAAS 140 (177)
Q Consensus 115 ~~~~~~~~~~~~~~~~~d~vi~~aa~ 140 (177)
+.+ .+-+++|.|+-.--+
T Consensus 70 p~~--------~~y~~a~liysirpp 87 (134)
T PRK04148 70 PNL--------EIYKNAKLIYSIRPP 87 (134)
T ss_pred CCH--------HHHhcCCEEEEeCCC
Confidence 852 234567777766443
No 381
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=95.91 E-value=0.13 Score=41.92 Aligned_cols=97 Identities=18% Similarity=0.272 Sum_probs=56.0
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCC-----CC---hHHHHHHHHhhhhhhcccccCcccCC
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG-----SS---PEERVKNMLNSVIFDRLNKEVPDFRS 103 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (177)
..++..+|+|.| .|++|+++++.|...|. .+++.++.+.-. ++ ..+.+-........+++.+.-+ .-
T Consensus 37 ~~l~~~~VliiG-~GglG~~v~~~La~~Gv--g~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np--~v 111 (370)
T PRK05600 37 ERLHNARVLVIG-AGGLGCPAMQSLASAGV--GTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQP--DI 111 (370)
T ss_pred HHhcCCcEEEEC-CCHHHHHHHHHHHHcCC--CEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCC--CC
Confidence 346778999999 67899999999999884 788888775210 00 0011111111111112211111 12
Q ss_pred CeEEEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcc
Q psy17489 104 KIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAAS 140 (177)
Q Consensus 104 ~v~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~ 140 (177)
++..+...++. +....+++++|+||.+...
T Consensus 112 ~i~~~~~~i~~-------~~~~~~~~~~DlVid~~Dn 141 (370)
T PRK05600 112 RVNALRERLTA-------ENAVELLNGVDLVLDGSDS 141 (370)
T ss_pred eeEEeeeecCH-------HHHHHHHhCCCEEEECCCC
Confidence 34445444443 4566778999999999764
No 382
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=95.90 E-value=0.054 Score=41.81 Aligned_cols=35 Identities=26% Similarity=0.430 Sum_probs=25.6
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEE-EEeCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYI-MVRDK 73 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~-~~r~~ 73 (177)
++|.|+|++|.+|+.+++.+.+. .++ .+.. ++++.
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~-~~~-elvav~d~~~ 37 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAA-EDL-ELVAAVDRPG 37 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhC-CCC-EEEEEEecCC
Confidence 58999999999999999888765 233 4444 44443
No 383
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=95.87 E-value=0.094 Score=40.00 Aligned_cols=114 Identities=13% Similarity=0.222 Sum_probs=62.7
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC-----CCChHHHHHHHHhhhhhhcccccCcccCCCeEE
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK-----GSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQV 107 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 107 (177)
.++..+|+|.| -|++|+|.++.|.+.|. .++..++-+.- +.+... +...+.+...+.+.+......+..+.
T Consensus 27 kl~~~~V~VvG-iGGVGSw~veALaRsGi--g~itlID~D~v~vTN~NRQi~A-~~~~iGk~Kv~vm~eri~~InP~c~V 102 (263)
T COG1179 27 KLKQAHVCVVG-IGGVGSWAVEALARSGI--GRITLIDMDDVCVTNTNRQIHA-LLGDIGKPKVEVMKERIKQINPECEV 102 (263)
T ss_pred HHhhCcEEEEe-cCchhHHHHHHHHHcCC--CeEEEEecccccccccchhhHh-hhhhcccHHHHHHHHHHHhhCCCceE
Confidence 35567899999 67899999999999984 67777765431 111100 10011111111111111112344444
Q ss_pred EeC-CCCCCCCCCCHHHHHHHhc-CCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCC
Q psy17489 108 IPS-NLESEHLGLSEDSEQLIKS-KVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNL 171 (177)
Q Consensus 108 ~~~-D~~~~~~~~~~~~~~~~~~-~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~ 171 (177)
... |+-.+ +.+..++. +.|+||.+--. +..-..|+.+|.++ ++
T Consensus 103 ~~~~~f~t~------en~~~~~~~~~DyvIDaiD~--------------v~~Kv~Li~~c~~~-ki 147 (263)
T COG1179 103 TAINDFITE------ENLEDLLSKGFDYVIDAIDS--------------VRAKVALIAYCRRN-KI 147 (263)
T ss_pred eehHhhhCH------hHHHHHhcCCCCEEEEchhh--------------hHHHHHHHHHHHHc-CC
Confidence 332 33333 56666654 68999988432 34445688888887 55
No 384
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=95.86 E-value=0.031 Score=44.89 Aligned_cols=39 Identities=23% Similarity=0.419 Sum_probs=31.1
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
.+.++|.|.||||++|..+++.|.+..+.+.++..+..+
T Consensus 2 ~~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~ 40 (336)
T PRK08040 2 SEGWNIALLGATGAVGEALLELLAERQFPVGELYALASE 40 (336)
T ss_pred CCCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEcc
Confidence 356799999999999999999999855555677666543
No 385
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=95.84 E-value=0.16 Score=36.92 Aligned_cols=40 Identities=18% Similarity=0.125 Sum_probs=33.7
Q ss_pred cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489 31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 74 (177)
Q Consensus 31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~ 74 (177)
...+.|+++.|.| .|-||+.+++.+...| .+|+..+|+..
T Consensus 31 ~~~l~g~tvgIiG-~G~IG~~vA~~l~~fG---~~V~~~d~~~~ 70 (178)
T PF02826_consen 31 GRELRGKTVGIIG-YGRIGRAVARRLKAFG---MRVIGYDRSPK 70 (178)
T ss_dssp BS-STTSEEEEES-TSHHHHHHHHHHHHTT----EEEEEESSCH
T ss_pred ccccCCCEEEEEE-EcCCcCeEeeeeecCC---ceeEEecccCC
Confidence 3457899999998 7999999999999998 69999998763
No 386
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=95.79 E-value=0.12 Score=40.90 Aligned_cols=106 Identities=12% Similarity=0.056 Sum_probs=64.1
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
++|.|.|+ |.+|..++..++..|. ..|++++..+..... ...+.... .. . ...... +. .+
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~--~~VvlvDi~~~l~~g--~a~d~~~~-~~-------~-~~~~~~-i~--~t--- 61 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKEL--ADLVLLDVVEGIPQG--KALDMYEA-SP-------V-GGFDTK-VT--GT--- 61 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCC--CeEEEEeCCCChhHH--HHHhhhhh-hh-------c-cCCCcE-EE--ec---
Confidence 47899996 9999999999999874 368888885432211 11111110 00 0 000001 11 01
Q ss_pred CCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 117 LGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
.++.. ++++|+||-+++.... .++-.+.+..|......+++...++
T Consensus 62 -----~d~~~-~~~aDiVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~ 108 (305)
T TIGR01763 62 -----NNYAD-TANSDIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEH 108 (305)
T ss_pred -----CCHHH-hCCCCEEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 12333 5789999999995432 2344457788999999888887766
No 387
>KOG1198|consensus
Probab=95.76 E-value=0.037 Score=44.65 Aligned_cols=38 Identities=18% Similarity=0.217 Sum_probs=29.5
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 71 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r 71 (177)
....|+.+||.||+|.+|++.++.....| ...|++..+
T Consensus 154 ~~~~g~~vLv~ggsggVG~~aiQlAk~~~--~~~v~t~~s 191 (347)
T KOG1198|consen 154 KLSKGKSVLVLGGSGGVGTAAIQLAKHAG--AIKVVTACS 191 (347)
T ss_pred ccCCCCeEEEEeCCcHHHHHHHHHHHhcC--CcEEEEEcc
Confidence 34578899999999999999999888876 345555444
No 388
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.69 E-value=0.23 Score=38.66 Aligned_cols=38 Identities=32% Similarity=0.463 Sum_probs=31.7
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
..+.+.+|+|.| .|++|+++++.|.+.|. .+++.++.+
T Consensus 26 ~kL~~s~VlVvG-~GGVGs~vae~Lar~GV--g~itLiD~D 63 (268)
T PRK15116 26 QLFADAHICVVG-IGGVGSWAAEALARTGI--GAITLIDMD 63 (268)
T ss_pred HHhcCCCEEEEC-cCHHHHHHHHHHHHcCC--CEEEEEeCC
Confidence 346778999998 67899999999999984 788888765
No 389
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=95.67 E-value=0.13 Score=38.43 Aligned_cols=37 Identities=16% Similarity=0.195 Sum_probs=31.0
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
.+.|++++|.| +|.+|..-++.|++.| ++|++++.+.
T Consensus 6 ~l~gk~vlVvG-gG~va~rk~~~Ll~~g---a~VtVvsp~~ 42 (205)
T TIGR01470 6 NLEGRAVLVVG-GGDVALRKARLLLKAG---AQLRVIAEEL 42 (205)
T ss_pred EcCCCeEEEEC-cCHHHHHHHHHHHHCC---CEEEEEcCCC
Confidence 36789999999 6889999999999998 6888777543
No 390
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=95.65 E-value=0.05 Score=45.65 Aligned_cols=35 Identities=14% Similarity=0.212 Sum_probs=29.6
Q ss_pred cCCCceEEEecC----------------CcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489 33 FYRDGQILVTGG----------------TGFMGKLLIDKLLRSFPDIGAIYIMV 70 (177)
Q Consensus 33 ~~~~~~vlVtG~----------------~G~iG~~l~~~L~~~g~~~~~v~~~~ 70 (177)
.+.|++|+||+| +|..|.+|++.+...| +.|+.+.
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~G---A~VtlI~ 303 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAG---AEVTLIS 303 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCC---CcEEEEe
Confidence 479999999997 4569999999999999 5777665
No 391
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.63 E-value=0.053 Score=42.45 Aligned_cols=37 Identities=16% Similarity=0.104 Sum_probs=31.5
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
.++|++++|+|.+..+|..++..|++.| ++|+...+.
T Consensus 156 ~l~Gk~vvViGrs~iVG~Pla~lL~~~~---atVtv~hs~ 192 (285)
T PRK10792 156 DTYGLNAVVVGASNIVGRPMSLELLLAG---CTVTVCHRF 192 (285)
T ss_pred CCCCCEEEEECCCcccHHHHHHHHHHCC---CeEEEEECC
Confidence 3679999999999999999999999887 677766543
No 392
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=95.59 E-value=0.1 Score=40.97 Aligned_cols=37 Identities=19% Similarity=0.121 Sum_probs=31.1
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
..+++++|.|+ |+.|++++..|...|. .+|++++|+.
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~G~--~~I~I~nR~~ 161 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTLGV--ERLTIFDVDP 161 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 46789999995 6699999999999873 6899998875
No 393
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=95.58 E-value=0.055 Score=43.60 Aligned_cols=34 Identities=21% Similarity=0.294 Sum_probs=26.9
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 71 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r 71 (177)
+++|.|.||+|++|..+++.|.+.. . .+++++.+
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p-~-~elv~v~~ 35 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHP-E-VEIVAVTS 35 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCC-C-ceEEEEEC
Confidence 3689999999999999999998762 2 46655554
No 394
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.57 E-value=0.048 Score=43.01 Aligned_cols=38 Identities=16% Similarity=0.261 Sum_probs=33.1
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
.++||++.|.|.+|.+|..++..|++.| ++|++..+..
T Consensus 156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~g---atVtv~~~~t 193 (301)
T PRK14194 156 DLTGKHAVVIGRSNIVGKPMAALLLQAH---CSVTVVHSRS 193 (301)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCC---CEEEEECCCC
Confidence 4689999999999999999999999998 6888776544
No 395
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=95.55 E-value=0.14 Score=41.98 Aligned_cols=37 Identities=24% Similarity=0.292 Sum_probs=30.7
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
.++..+|+|.| .|++|+.+++.|...|. .++..++.+
T Consensus 39 ~L~~~~VlviG-~GGlGs~va~~La~~Gv--g~i~lvD~D 75 (392)
T PRK07878 39 RLKNARVLVIG-AGGLGSPTLLYLAAAGV--GTLGIVEFD 75 (392)
T ss_pred HHhcCCEEEEC-CCHHHHHHHHHHHHcCC--CeEEEECCC
Confidence 45678999999 67899999999999884 788877764
No 396
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.53 E-value=0.17 Score=38.56 Aligned_cols=37 Identities=27% Similarity=0.352 Sum_probs=30.9
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
.++..+|+|.| .|++|+++++.|.+.|. .+++.++.+
T Consensus 8 ~L~~~~VlVvG-~GGvGs~va~~Lar~GV--g~i~LvD~D 44 (231)
T cd00755 8 KLRNAHVAVVG-LGGVGSWAAEALARSGV--GKLTLIDFD 44 (231)
T ss_pred HHhCCCEEEEC-CCHHHHHHHHHHHHcCC--CEEEEECCC
Confidence 35677899999 67899999999999984 788888764
No 397
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=95.51 E-value=0.083 Score=41.94 Aligned_cols=37 Identities=30% Similarity=0.359 Sum_probs=31.0
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
+.+++++|.|+ |.+|..+++.|...|. ..|++.+|+.
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~--~~V~v~~r~~ 212 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGV--AEITIANRTY 212 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCC--CEEEEEeCCH
Confidence 57899999996 9999999999988653 6788888865
No 398
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=95.49 E-value=0.11 Score=42.26 Aligned_cols=35 Identities=17% Similarity=0.242 Sum_probs=29.3
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
.+.+++|+|+ |-+|...++.+...| .+|++.+|+.
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lG---a~V~v~d~~~ 200 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLG---ATVTILDINI 200 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCC---CeEEEEECCH
Confidence 4567999986 889999999999998 5788888764
No 399
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=95.47 E-value=0.061 Score=37.09 Aligned_cols=36 Identities=19% Similarity=0.239 Sum_probs=28.4
Q ss_pred EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCC
Q psy17489 39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG 75 (177)
Q Consensus 39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~ 75 (177)
+.|.|+||.||+..+.-+.+.. +-.+|+++.-....
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~-d~f~v~~Lsa~~n~ 36 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHP-DKFEVVALSAGSNI 36 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCT-TTEEEEEEEESSTH
T ss_pred CEEEcCCcHHHHHHHHHHHhCC-CceEEEEEEcCCCH
Confidence 5799999999999999998874 44588887765443
No 400
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=95.46 E-value=0.075 Score=37.21 Aligned_cols=37 Identities=24% Similarity=0.292 Sum_probs=32.2
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
.++|++++|.|.+.-+|..++..|.++| .+|+...++
T Consensus 25 ~~~gk~v~VvGrs~~vG~pla~lL~~~g---atV~~~~~~ 61 (140)
T cd05212 25 RLDGKKVLVVGRSGIVGAPLQCLLQRDG---ATVYSCDWK 61 (140)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEeCCC
Confidence 4689999999999999999999999988 677776643
No 401
>PRK06153 hypothetical protein; Provisional
Probab=95.46 E-value=0.087 Score=42.97 Aligned_cols=39 Identities=18% Similarity=0.295 Sum_probs=32.6
Q ss_pred cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
...+++.+|+|.| .|++|++++..|.+.| +.++++++.+
T Consensus 171 q~kL~~~~VaIVG-~GG~GS~Va~~LAR~G--VgeI~LVD~D 209 (393)
T PRK06153 171 SAKLEGQRIAIIG-LGGTGSYILDLVAKTP--VREIHLFDGD 209 (393)
T ss_pred HHHHhhCcEEEEc-CCccHHHHHHHHHHcC--CCEEEEECCC
Confidence 3457788999999 6779999999999998 4788888764
No 402
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=95.46 E-value=0.15 Score=40.26 Aligned_cols=37 Identities=22% Similarity=0.178 Sum_probs=31.9
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
.+.+++++|.|. |.+|..++..|...| .+|++.+|+.
T Consensus 149 ~l~g~kvlViG~-G~iG~~~a~~L~~~G---a~V~v~~r~~ 185 (296)
T PRK08306 149 TIHGSNVLVLGF-GRTGMTLARTLKALG---ANVTVGARKS 185 (296)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCC---CEEEEEECCH
Confidence 356899999995 779999999999998 5899888874
No 403
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.42 E-value=0.061 Score=42.14 Aligned_cols=35 Identities=23% Similarity=0.285 Sum_probs=30.4
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV 70 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~ 70 (177)
.+.|++++|.|.++.+|+.++..|.+.| .+|+...
T Consensus 155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~---atVt~~h 189 (285)
T PRK14189 155 PLRGAHAVVIGRSNIVGKPMAMLLLQAG---ATVTICH 189 (285)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCC---CEEEEec
Confidence 3689999999999999999999999987 6776543
No 404
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.41 E-value=0.043 Score=39.83 Aligned_cols=33 Identities=24% Similarity=0.274 Sum_probs=27.4
Q ss_pred eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
+|+|.| .|.+|+.+++.|...|. .+++.++.+.
T Consensus 1 ~VlViG-~GglGs~ia~~La~~Gv--g~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAG-AGGLGSNIAVLLARSGV--GNLKLVDFDV 33 (174)
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCC--CeEEEEeCCE
Confidence 478888 58899999999999884 6788888753
No 405
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.40 E-value=0.073 Score=41.68 Aligned_cols=37 Identities=19% Similarity=0.098 Sum_probs=31.4
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
..+++++|.| +|+.|++++..|.+.|. .+|+++.|+.
T Consensus 123 ~~~k~vlvlG-aGGaarai~~aL~~~G~--~~i~I~nRt~ 159 (282)
T TIGR01809 123 LAGFRGLVIG-AGGTSRAAVYALASLGV--TDITVINRNP 159 (282)
T ss_pred cCCceEEEEc-CcHHHHHHHHHHHHcCC--CeEEEEeCCH
Confidence 4678999998 58899999999999884 6899998875
No 406
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=95.37 E-value=0.051 Score=43.46 Aligned_cols=27 Identities=22% Similarity=0.193 Sum_probs=24.4
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFP 61 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~ 61 (177)
.|.++||+||+|.+|+..++.....|.
T Consensus 142 ~g~~VLV~gaaGgVG~~aiQlAk~~G~ 168 (326)
T COG0604 142 PGETVLVHGAAGGVGSAAIQLAKALGA 168 (326)
T ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC
Confidence 378999999999999999999988883
No 407
>KOG1202|consensus
Probab=95.33 E-value=0.039 Score=50.77 Aligned_cols=120 Identities=20% Similarity=0.274 Sum_probs=76.7
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChH-HHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPE-ERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES 114 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 114 (177)
.|+++|+||-|+.|..++++|..+|. ..++..+|+.-..-.. ..++.+.. .+..+..-..|++.
T Consensus 1768 eksYii~GGLGGFGLELaqWLi~RGa--r~lVLtSRsGirtGYQa~~vrrWr~-------------~GVqV~vsT~nitt 1832 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGA--RKLVLTSRSGIRTGYQALMVRRWRR-------------RGVQVQVSTSNITT 1832 (2376)
T ss_pred cceEEEeccccchhHHHHHHHHhcCc--eEEEEeccccchhhHHHHHHHHHHh-------------cCeEEEEecccchh
Confidence 47899999999999999999999984 5677777875321111 12222111 12334444455555
Q ss_pred CCCCCCHHHHHHHhc------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh-cCCCCCcee
Q psy17489 115 EHLGLSEDSEQLIKS------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE-CVNLKRFCE 176 (177)
Q Consensus 115 ~~~~~~~~~~~~~~~------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~-~~~~~~~v~ 176 (177)
. +....+++ .+..|+|.|+... ..+++.+.-++.+.++.+|=+..++ ++.++-||+
T Consensus 1833 ~------~ga~~Li~~s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~ 1902 (2376)
T KOG1202|consen 1833 A------EGARGLIEESNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVV 1902 (2376)
T ss_pred h------hhHHHHHHHhhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEE
Confidence 4 33444443 5789999998743 2355566667788888888777765 356666664
No 408
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.32 E-value=0.077 Score=41.18 Aligned_cols=36 Identities=19% Similarity=0.254 Sum_probs=30.6
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
.++++++|+|+ |.+|..++..|.+.| .+|++.+|+.
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g---~~v~v~~R~~ 150 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKAD---CNVIIANRTV 150 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence 35789999997 799999999999987 5888888764
No 409
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=95.30 E-value=0.25 Score=39.01 Aligned_cols=104 Identities=13% Similarity=0.141 Sum_probs=63.6
Q ss_pred EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489 39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG 118 (177)
Q Consensus 39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 118 (177)
+.|.|+ |++|..++..|+..|. +..++++++++... .....++.. . ............ +
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~-~~el~l~D~~~~~~--~g~~~DL~~------~----~~~~~~~~i~~~---~---- 59 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGL-ASELVLVDVNEEKA--KGDALDLSH------A----SAFLATGTIVRG---G---- 59 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCccHH--HHHHHhHHH------h----ccccCCCeEEEC---C----
Confidence 457885 7899999999998863 35788888865321 111111111 0 000011122211 1
Q ss_pred CCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 119 LSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 119 ~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
+. ..++++|++|.++|... ..++-.+.+..|+.....+.+..+++
T Consensus 60 ----~~-~~l~~aDiVIitag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~ 105 (300)
T cd00300 60 ----DY-ADAADADIVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKY 105 (300)
T ss_pred ----CH-HHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 12 25689999999999643 23345567788999999998888876
No 410
>PRK08328 hypothetical protein; Provisional
Probab=95.28 E-value=0.13 Score=39.06 Aligned_cols=37 Identities=19% Similarity=0.258 Sum_probs=31.1
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
.+++.+|+|.| .|++|+++++.|...|. .+++.++.+
T Consensus 24 ~L~~~~VlIiG-~GGlGs~ia~~La~~Gv--g~i~lvD~D 60 (231)
T PRK08328 24 KLKKAKVAVVG-VGGLGSPVAYYLAAAGV--GRILLIDEQ 60 (231)
T ss_pred HHhCCcEEEEC-CCHHHHHHHHHHHHcCC--CEEEEEcCC
Confidence 45678999999 67899999999999984 788888764
No 411
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=95.26 E-value=0.26 Score=38.95 Aligned_cols=102 Identities=11% Similarity=0.101 Sum_probs=63.0
Q ss_pred EecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCCCC
Q psy17489 41 VTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLGLS 120 (177)
Q Consensus 41 VtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~ 120 (177)
|.| .|.+|.+++..|+..+. +..+..++..++... -...++..- ......++.....|
T Consensus 1 iIG-aG~VG~~~a~~l~~~~l-~~el~L~Di~~~~~~--g~a~Dl~~~---------~~~~~~~~~i~~~~--------- 58 (299)
T TIGR01771 1 IIG-AGNVGSSTAFALLNQGI-ADEIVLIDINKDKAE--GEAMDLQHA---------ASFLPTPKKIRSGD--------- 58 (299)
T ss_pred CCC-cCHHHHHHHHHHHhcCC-CCEEEEEeCCCChhh--HHHHHHHHh---------hcccCCCeEEecCC---------
Confidence 345 59999999999988764 457888888653221 122221110 00001122222111
Q ss_pred HHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 121 EDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 121 ~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
-..++++|+||-.||.... .++-.+.++.|+.....+.+...++
T Consensus 59 ----~~~~~daDivVitag~~rk~g~~R~dll~~N~~i~~~~~~~i~~~ 103 (299)
T TIGR01771 59 ----YSDCKDADLVVITAGAPQKPGETRLELVGRNVRIMKSIVPEVVKS 103 (299)
T ss_pred ----HHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 1346889999999997432 2345568899999999999888876
No 412
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=95.23 E-value=0.1 Score=43.19 Aligned_cols=37 Identities=27% Similarity=0.344 Sum_probs=31.3
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
+.+++++|.|+ |.+|..++..|...|. ..|++.+|+.
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~--~~V~v~~r~~ 216 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGV--RKITVANRTL 216 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCC--CeEEEEeCCH
Confidence 67899999985 9999999999998873 5788888865
No 413
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=95.22 E-value=0.16 Score=40.61 Aligned_cols=36 Identities=11% Similarity=-0.000 Sum_probs=32.2
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
.+.||++.|.| .|-||+.+++.+...| -+|++.++.
T Consensus 139 el~gkTvGIiG-~G~IG~~va~~l~afg---m~v~~~d~~ 174 (324)
T COG0111 139 ELAGKTVGIIG-LGRIGRAVAKRLKAFG---MKVIGYDPY 174 (324)
T ss_pred cccCCEEEEEC-CCHHHHHHHHHHHhCC---CeEEEECCC
Confidence 46799999999 8999999999999998 699999883
No 414
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.16 E-value=0.088 Score=41.28 Aligned_cols=36 Identities=14% Similarity=0.197 Sum_probs=30.8
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 71 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r 71 (177)
.++|++++|.|.+..+|..++..|++.| ++|.....
T Consensus 161 ~l~Gk~vvViGrs~iVGkPla~lL~~~~---atVtv~hs 196 (287)
T PRK14176 161 DIEGKNAVIVGHSNVVGKPMAAMLLNRN---ATVSVCHV 196 (287)
T ss_pred CCCCCEEEEECCCcccHHHHHHHHHHCC---CEEEEEec
Confidence 3689999999999999999999999987 57766543
No 415
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=95.11 E-value=0.13 Score=42.61 Aligned_cols=38 Identities=34% Similarity=0.461 Sum_probs=32.2
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
.+.+++++|.|+ |.+|..+++.|...|. .+|++.+|+.
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~--~~V~v~~rs~ 214 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGV--GKILIANRTY 214 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCC--CEEEEEeCCH
Confidence 467899999996 9999999999998773 6888888865
No 416
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=95.11 E-value=0.13 Score=40.94 Aligned_cols=79 Identities=20% Similarity=0.167 Sum_probs=48.8
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
++|.|.| +|.+|++|+..|.++| +.|..-+|++ +.+.+... ...+..+++ ++.-+.
T Consensus 2 ~kI~ViG-aGswGTALA~~la~ng---~~V~lw~r~~------~~~~~i~~-------------~~~N~~yLp-~i~lp~ 57 (329)
T COG0240 2 MKIAVIG-AGSWGTALAKVLARNG---HEVRLWGRDE------EIVAEINE-------------TRENPKYLP-GILLPP 57 (329)
T ss_pred ceEEEEc-CChHHHHHHHHHHhcC---CeeEEEecCH------HHHHHHHh-------------cCcCccccC-CccCCc
Confidence 5788998 6889999999999998 5888888875 22222221 112344444 222221
Q ss_pred CCCCHHHHHHHhcCCcEEEEcCc
Q psy17489 117 LGLSEDSEQLIKSKVNIIFHCAA 139 (177)
Q Consensus 117 ~~~~~~~~~~~~~~~d~vi~~aa 139 (177)
.-....++..+++++|+|+-...
T Consensus 58 ~l~at~Dl~~a~~~ad~iv~avP 80 (329)
T COG0240 58 NLKATTDLAEALDGADIIVIAVP 80 (329)
T ss_pred ccccccCHHHHHhcCCEEEEECC
Confidence 11112457777777887776654
No 417
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=95.10 E-value=0.04 Score=41.37 Aligned_cols=34 Identities=41% Similarity=0.379 Sum_probs=29.7
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
|+|.|+||+|.+|..++..|.+.| ++|++.+|++
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G---~~V~v~~r~~ 34 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAG---NKIIIGSRDL 34 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCC---CEEEEEEcCH
Confidence 479999999999999999999998 5777777765
No 418
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.07 E-value=0.12 Score=40.49 Aligned_cols=34 Identities=15% Similarity=0.301 Sum_probs=29.8
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEE
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM 69 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~ 69 (177)
.+.|++++|.|.+..+|..++..|++.| ++|.++
T Consensus 154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~g---AtVtv~ 187 (285)
T PRK14191 154 EIKGKDVVIIGASNIVGKPLAMLMLNAG---ASVSVC 187 (285)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCC---CEEEEE
Confidence 3679999999999999999999999988 566655
No 419
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.03 E-value=0.12 Score=40.48 Aligned_cols=35 Identities=17% Similarity=0.201 Sum_probs=30.5
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV 70 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~ 70 (177)
.++|++++|.|.+..+|+.++..|+++| ++|+...
T Consensus 155 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~---atVt~ch 189 (284)
T PRK14190 155 DISGKHVVVVGRSNIVGKPVGQLLLNEN---ATVTYCH 189 (284)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCC---CEEEEEe
Confidence 3689999999999999999999999987 6776653
No 420
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.01 E-value=0.11 Score=40.69 Aligned_cols=36 Identities=19% Similarity=0.234 Sum_probs=31.0
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 71 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r 71 (177)
.++||+++|.|.+..+|..++..|+++| ++|..+-.
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~---ATVt~chs 190 (282)
T PRK14180 155 KTEGAYAVVVGASNVVGKPVSQLLLNAK---ATVTTCHR 190 (282)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCC---CEEEEEcC
Confidence 4689999999999999999999999987 57766543
No 421
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=95.00 E-value=0.086 Score=42.53 Aligned_cols=30 Identities=27% Similarity=0.504 Sum_probs=24.3
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEE
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYI 68 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~ 68 (177)
++|.|.||+|++|..+++.|.+. +. .+++.
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~h-P~-~el~~ 30 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNH-PE-VEITY 30 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcC-CC-ceEEE
Confidence 47999999999999999999876 33 45553
No 422
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=94.97 E-value=0.34 Score=34.77 Aligned_cols=39 Identities=18% Similarity=0.178 Sum_probs=29.3
Q ss_pred cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
..++.||+++|.| -|.+|+.+++.|...| .+|++...++
T Consensus 18 ~~~l~Gk~vvV~G-YG~vG~g~A~~lr~~G---a~V~V~e~DP 56 (162)
T PF00670_consen 18 NLMLAGKRVVVIG-YGKVGKGIARALRGLG---ARVTVTEIDP 56 (162)
T ss_dssp -S--TTSEEEEE---SHHHHHHHHHHHHTT----EEEEE-SSH
T ss_pred ceeeCCCEEEEeC-CCcccHHHHHHHhhCC---CEEEEEECCh
Confidence 4567899999999 9999999999999999 7898888765
No 423
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.94 E-value=0.11 Score=40.57 Aligned_cols=35 Identities=20% Similarity=0.285 Sum_probs=30.3
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV 70 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~ 70 (177)
.++||+++|.|.+..+|..++..|+++| ++|+..-
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~---AtVt~ch 189 (278)
T PRK14172 155 DIEGKEVVVIGRSNIVGKPVAQLLLNEN---ATVTICH 189 (278)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCC---CEEEEeC
Confidence 4689999999999999999999999887 5776554
No 424
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.90 E-value=0.11 Score=40.66 Aligned_cols=35 Identities=14% Similarity=0.124 Sum_probs=30.6
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV 70 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~ 70 (177)
.++||+++|.|.+..+|..++..|+++| ++|+...
T Consensus 156 ~l~Gk~vvViGrS~iVGkPla~lL~~~~---atVt~ch 190 (284)
T PRK14177 156 DVTGKNAVVVGRSPILGKPMAMLLTEMN---ATVTLCH 190 (284)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCC---CEEEEeC
Confidence 4689999999999999999999999987 5777654
No 425
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=94.88 E-value=0.33 Score=35.90 Aligned_cols=36 Identities=14% Similarity=0.118 Sum_probs=32.3
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 71 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r 71 (177)
.++||+++|.|.+.-+|..++..|++.| ++|+++..
T Consensus 59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~---AtVti~~~ 94 (197)
T cd01079 59 RLYGKTITIINRSEVVGRPLAALLANDG---ARVYSVDI 94 (197)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCC---CEEEEEec
Confidence 5889999999999999999999999988 78887753
No 426
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.85 E-value=0.12 Score=40.58 Aligned_cols=35 Identities=23% Similarity=0.323 Sum_probs=30.2
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV 70 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~ 70 (177)
.++|++++|.|.+..+|..++..|++.| ++|++.-
T Consensus 152 ~l~Gk~vvViGrS~iVGkPla~lL~~~~---aTVtich 186 (287)
T PRK14173 152 PLAGKEVVVVGRSNIVGKPLAALLLRED---ATVTLAH 186 (287)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCC---CEEEEeC
Confidence 4689999999999999999999999887 5776543
No 427
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=94.78 E-value=0.11 Score=42.39 Aligned_cols=36 Identities=25% Similarity=0.394 Sum_probs=31.3
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
..++|.|.||.|.+|..++..|.+.| ..|++.+|+.
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G---~~V~~~d~~~ 132 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSG---YQVRILEQDD 132 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCC---CeEEEeCCCc
Confidence 45789999999999999999999998 5788888753
No 428
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=94.75 E-value=0.14 Score=43.84 Aligned_cols=71 Identities=23% Similarity=0.302 Sum_probs=50.0
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
.+++|.| .|-+|+++++.|.++| ..++++++++ +++++..+ .....+.+|.+++
T Consensus 418 ~hiiI~G-~G~~G~~la~~L~~~g---~~vvvId~d~------~~~~~~~~---------------~g~~~i~GD~~~~- 471 (558)
T PRK10669 418 NHALLVG-YGRVGSLLGEKLLAAG---IPLVVIETSR------TRVDELRE---------------RGIRAVLGNAANE- 471 (558)
T ss_pred CCEEEEC-CChHHHHHHHHHHHCC---CCEEEEECCH------HHHHHHHH---------------CCCeEEEcCCCCH-
Confidence 4677887 7889999999999998 5788888765 33333221 3578899999997
Q ss_pred CCCCHHHHHHH-hcCCcEEEEcC
Q psy17489 117 LGLSEDSEQLI-KSKVNIIFHCA 138 (177)
Q Consensus 117 ~~~~~~~~~~~-~~~~d~vi~~a 138 (177)
+.++++ ++++|.++-+-
T Consensus 472 -----~~L~~a~i~~a~~viv~~ 489 (558)
T PRK10669 472 -----EIMQLAHLDCARWLLLTI 489 (558)
T ss_pred -----HHHHhcCccccCEEEEEc
Confidence 555543 35777666543
No 429
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=94.74 E-value=0.54 Score=37.04 Aligned_cols=104 Identities=13% Similarity=0.074 Sum_probs=60.3
Q ss_pred EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489 39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG 118 (177)
Q Consensus 39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 118 (177)
|.|+|+ |.+|..++..++..|.. .|+.+++++..... ...+.... .. .......+.. +
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~--eV~L~Di~e~~~~g--~~~dl~~~--~~-------~~~~~~~I~~---t----- 58 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELG--DVVLLDIVEGLPQG--KALDISQA--AP-------ILGSDTKVTG---T----- 58 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCc--EEEEEeCCCcHHHH--HHHHHHHh--hh-------hcCCCeEEEE---c-----
Confidence 468897 99999999999887742 89999987532211 11111110 00 0001111111 0
Q ss_pred CCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489 119 LSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC 168 (177)
Q Consensus 119 ~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~ 168 (177)
.++. .++++|+||.+++.... .++..+.+..|+.....+.+...+.
T Consensus 59 ---~d~~-~l~dADiVIit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~ 105 (300)
T cd01339 59 ---NDYE-DIAGSDVVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKY 105 (300)
T ss_pred ---CCHH-HhCCCCEEEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122 36899999999986432 2333446667888777787777665
No 430
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.74 E-value=0.12 Score=40.73 Aligned_cols=38 Identities=21% Similarity=0.276 Sum_probs=32.5
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE-eCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV-RDK 73 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~-r~~ 73 (177)
.++||+++|.|.++.+|..++..|++.| +.|++.. |+.
T Consensus 155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g---~tVtv~~~rT~ 193 (296)
T PRK14188 155 DLSGLNAVVIGRSNLVGKPMAQLLLAAN---ATVTIAHSRTR 193 (296)
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHhCC---CEEEEECCCCC
Confidence 3689999999999999999999999998 5777773 543
No 431
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=94.74 E-value=0.2 Score=39.90 Aligned_cols=92 Identities=20% Similarity=0.221 Sum_probs=51.7
Q ss_pred eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCC-----CC---hHHHHHHHHhhhhhhcccccCcccCCCeEEEe
Q psy17489 38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG-----SS---PEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP 109 (177)
Q Consensus 38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 109 (177)
+|+|.| .|++|..+++.|...|. .++..++.+.-. ++ ..+.+-+.......+++.+. . ..-++..+.
T Consensus 1 kVlIVG-aGGlG~EiaKnLal~Gv--g~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~l-N-p~v~V~~~~ 75 (312)
T cd01489 1 KVLVVG-AGGIGCELLKNLVLTGF--GEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSF-N-PNVKIVAYH 75 (312)
T ss_pred CEEEEC-CCHHHHHHHHHHHHhcC--CeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHH-C-CCCeEEEEe
Confidence 478898 48899999999999984 788888764211 00 01111111111111222111 1 113456666
Q ss_pred CCCCCCCCCCCHHHHHHHhcCCcEEEEcCcc
Q psy17489 110 SNLESEHLGLSEDSEQLIKSKVNIIFHCAAS 140 (177)
Q Consensus 110 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~ 140 (177)
.++.+. ......+++.|+||.+...
T Consensus 76 ~~i~~~------~~~~~f~~~~DvVv~a~Dn 100 (312)
T cd01489 76 ANIKDP------DFNVEFFKQFDLVFNALDN 100 (312)
T ss_pred ccCCCc------cchHHHHhcCCEEEECCCC
Confidence 676653 1234567889999988653
No 432
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=94.68 E-value=0.16 Score=39.87 Aligned_cols=37 Identities=14% Similarity=0.133 Sum_probs=31.0
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
.++++++|.|+ |+.|++++..|.+.|. .+|++..|+.
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~--~~i~i~nR~~ 161 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGV--QKLQVADLDT 161 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCC--CEEEEEcCCH
Confidence 45789999995 8889999999999874 6888888864
No 433
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.66 E-value=0.12 Score=40.67 Aligned_cols=34 Identities=24% Similarity=0.214 Sum_probs=29.9
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEE
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM 69 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~ 69 (177)
.++||+++|.|.+..+|..++..|+++| ++|.+.
T Consensus 155 ~l~Gk~vvVIGrS~iVGkPla~lL~~~~---atVtv~ 188 (297)
T PRK14186 155 DIAGKKAVVVGRSILVGKPLALMLLAAN---ATVTIA 188 (297)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCC---CEEEEe
Confidence 4689999999999999999999999987 577655
No 434
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=94.65 E-value=0.11 Score=41.87 Aligned_cols=37 Identities=22% Similarity=0.405 Sum_probs=28.1
Q ss_pred CCceEEEecCCcchHHHHHHHHHh-hCCCcCeEEEEEe
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLR-SFPDIGAIYIMVR 71 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~-~g~~~~~v~~~~r 71 (177)
++++|.|.||+|++|..+++.|.+ ....+.++..++.
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS 41 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSS 41 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEEC
Confidence 346899999999999999999984 5444445655543
No 435
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=94.64 E-value=0.089 Score=35.91 Aligned_cols=36 Identities=22% Similarity=0.429 Sum_probs=26.7
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
++|.|.|++|-+|+.+++.+.+. .+..-+-+++|++
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~-~~~~lv~~v~~~~ 36 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILES-PGFELVGAVDRKP 36 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS-TTEEEEEEEETTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhc-CCcEEEEEEecCC
Confidence 47999999999999999999984 2333344445554
No 436
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=94.64 E-value=0.29 Score=38.98 Aligned_cols=37 Identities=19% Similarity=0.158 Sum_probs=31.9
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
.+.++++.|.| .|.||+.+++.|...| .+|++.++..
T Consensus 133 ~l~g~tvgIvG-~G~IG~~vA~~l~afG---~~V~~~~~~~ 169 (312)
T PRK15469 133 HREDFTIGILG-AGVLGSKVAQSLQTWG---FPLRCWSRSR 169 (312)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHCC---CEEEEEeCCC
Confidence 46789999998 8999999999999988 5888887754
No 437
>PRK07877 hypothetical protein; Provisional
Probab=94.62 E-value=0.057 Score=47.64 Aligned_cols=97 Identities=16% Similarity=0.104 Sum_probs=56.6
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHH-------HHHHhhhhhhcccccCcccCCC
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERV-------KNMLNSVIFDRLNKEVPDFRSK 104 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 104 (177)
..++..+|+|.|+ | +|++++..|...|. +.+++.++.+.-..+-..++ -........+++.+. + ..-+
T Consensus 103 ~~L~~~~V~IvG~-G-lGs~~a~~LaraGv-vG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~i-n-p~i~ 177 (722)
T PRK07877 103 ERLGRLRIGVVGL-S-VGHAIAHTLAAEGL-CGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAEL-D-PYLP 177 (722)
T ss_pred HHHhcCCEEEEEe-c-HHHHHHHHHHHccC-CCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHH-C-CCCE
Confidence 3467789999999 7 99999999999872 25788777642111100111 000000111111111 1 1134
Q ss_pred eEEEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcc
Q psy17489 105 IQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAAS 140 (177)
Q Consensus 105 v~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~ 140 (177)
+..+...++. +.+..+++++|+|+.+.-.
T Consensus 178 v~~~~~~i~~-------~n~~~~l~~~DlVvD~~D~ 206 (722)
T PRK07877 178 VEVFTDGLTE-------DNVDAFLDGLDVVVEECDS 206 (722)
T ss_pred EEEEeccCCH-------HHHHHHhcCCCEEEECCCC
Confidence 5556666654 5788888999999999763
No 438
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=94.60 E-value=0.08 Score=39.32 Aligned_cols=39 Identities=21% Similarity=0.247 Sum_probs=32.5
Q ss_pred cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
...++||+++|+|. |.+|+++++.|.+.| .+|++.+++.
T Consensus 23 ~~~l~gk~v~I~G~-G~vG~~~A~~L~~~G---~~Vvv~D~~~ 61 (200)
T cd01075 23 TDSLEGKTVAVQGL-GKVGYKLAEHLLEEG---AKLIVADINE 61 (200)
T ss_pred CCCCCCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEcCCH
Confidence 34578999999996 689999999999999 5888777653
No 439
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.58 E-value=0.12 Score=40.46 Aligned_cols=34 Identities=18% Similarity=0.277 Sum_probs=30.2
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEE
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM 69 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~ 69 (177)
.++||+++|.|.+|.+|..++..|++.| ++|++.
T Consensus 155 ~l~Gk~v~vIG~S~ivG~Pla~lL~~~g---atVtv~ 188 (284)
T PRK14179 155 ELEGKHAVVIGRSNIVGKPMAQLLLDKN---ATVTLT 188 (284)
T ss_pred CCCCCEEEEECCCCcCcHHHHHHHHHCC---CEEEEE
Confidence 3689999999999999999999999998 577665
No 440
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=94.57 E-value=0.25 Score=38.72 Aligned_cols=36 Identities=22% Similarity=0.239 Sum_probs=31.3
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
.+.+++|+||+|.+|..+++.+...| .+|+++.+++
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g---~~v~~~~~~~ 197 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALG---ARVIAVTRSP 197 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcC---CeEEEEeCCH
Confidence 46799999999999999999999998 5788887654
No 441
>KOG4022|consensus
Probab=94.57 E-value=1.2 Score=32.16 Aligned_cols=35 Identities=17% Similarity=0.306 Sum_probs=29.0
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
-.+|+|-||-|-+|+++++.+-.++ +-|..++..+
T Consensus 3 agrVivYGGkGALGSacv~~Fkann---ywV~siDl~e 37 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANN---YWVLSIDLSE 37 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcC---eEEEEEeecc
Confidence 3589999999999999999999887 4666666654
No 442
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=94.51 E-value=0.46 Score=37.74 Aligned_cols=38 Identities=11% Similarity=0.022 Sum_probs=32.7
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
..+.||++.|.| .|.||+.+++.+...| .+|++.+|..
T Consensus 141 ~~L~gktvGIiG-~G~IG~~vA~~~~~fg---m~V~~~d~~~ 178 (311)
T PRK08410 141 GEIKGKKWGIIG-LGTIGKRVAKIAQAFG---AKVVYYSTSG 178 (311)
T ss_pred cccCCCEEEEEC-CCHHHHHHHHHHhhcC---CEEEEECCCc
Confidence 357899999999 8999999999998887 5899888753
No 443
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.49 E-value=0.17 Score=39.67 Aligned_cols=34 Identities=12% Similarity=0.260 Sum_probs=29.7
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEE
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM 69 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~ 69 (177)
.++||+++|.|.+..+|..++..|++.| ++|+..
T Consensus 153 ~l~Gk~vvViGrS~iVGkPla~lL~~~~---atVtic 186 (282)
T PRK14169 153 DVAGKRVVIVGRSNIVGRPLAGLMVNHD---ATVTIA 186 (282)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCC---CEEEEE
Confidence 3689999999999999999999999887 576554
No 444
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.48 E-value=0.16 Score=39.77 Aligned_cols=34 Identities=21% Similarity=0.294 Sum_probs=29.7
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEE
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM 69 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~ 69 (177)
.+.||+++|.|.+..+|..++..|+++| ++|++.
T Consensus 154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~---atVtic 187 (284)
T PRK14170 154 QIEGKRAVVIGRSNIVGKPVAQLLLNEN---ATVTIA 187 (284)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCC---CEEEEe
Confidence 4689999999999999999999999887 577644
No 445
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=94.47 E-value=0.14 Score=40.99 Aligned_cols=36 Identities=19% Similarity=0.351 Sum_probs=28.8
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 71 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r 71 (177)
+++|.|.|++|-+|+.+++.|.++.+.+..+..+..
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS 36 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLAS 36 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEec
Confidence 368999999999999999999996566655555544
No 446
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=94.46 E-value=0.082 Score=41.24 Aligned_cols=38 Identities=26% Similarity=0.239 Sum_probs=32.6
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
.+.+++++|+|+ |.+|++++..|...|. .+|++.+|+.
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~--~~V~v~~R~~ 157 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGV--AEITIVNRTV 157 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCC--CEEEEEeCCH
Confidence 356789999996 9999999999998873 6899999875
No 447
>PRK07411 hypothetical protein; Validated
Probab=94.44 E-value=0.17 Score=41.50 Aligned_cols=96 Identities=17% Similarity=0.121 Sum_probs=55.2
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCC-----CC---hHHHHHHHHhhhhhhcccccCcccCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG-----SS---PEERVKNMLNSVIFDRLNKEVPDFRSK 104 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (177)
.++..+|+|.| .|++|+++++.|...|. .++..++.+.-. ++ ..+.+-+.......+++.+.- ..-+
T Consensus 35 ~L~~~~VlivG-~GGlG~~va~~La~~Gv--g~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~n--p~v~ 109 (390)
T PRK07411 35 RLKAASVLCIG-TGGLGSPLLLYLAAAGI--GRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEIN--PYCQ 109 (390)
T ss_pred HHhcCcEEEEC-CCHHHHHHHHHHHHcCC--CEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHC--CCCe
Confidence 45678999999 67799999999999984 788888764211 00 011111111111111221111 1124
Q ss_pred eEEEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcc
Q psy17489 105 IQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAAS 140 (177)
Q Consensus 105 v~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~ 140 (177)
+..+...++. +.....+.++|+||.+...
T Consensus 110 v~~~~~~~~~-------~~~~~~~~~~D~Vvd~~d~ 138 (390)
T PRK07411 110 VDLYETRLSS-------ENALDILAPYDVVVDGTDN 138 (390)
T ss_pred EEEEecccCH-------HhHHHHHhCCCEEEECCCC
Confidence 5555555554 3456677889999998663
No 448
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=94.43 E-value=0.11 Score=41.62 Aligned_cols=34 Identities=21% Similarity=0.432 Sum_probs=27.5
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 71 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r 71 (177)
+++|.|.||+|+.|..|++.|... +++. ++....
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~H-p~ve-~~~~ss 35 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGH-PDVE-LILISS 35 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcC-CCeE-EEEeec
Confidence 468999999999999999999988 5564 555443
No 449
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.43 E-value=0.17 Score=39.89 Aligned_cols=36 Identities=17% Similarity=0.177 Sum_probs=30.8
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 71 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r 71 (177)
.++||+++|.|.+..+|..++..|+++| ++|+++-.
T Consensus 157 ~l~Gk~vvViGrS~iVGkPla~lL~~~~---aTVt~chs 192 (294)
T PRK14187 157 NLSGSDAVVIGRSNIVGKPMACLLLGEN---CTVTTVHS 192 (294)
T ss_pred CCCCCEEEEECCCccchHHHHHHHhhCC---CEEEEeCC
Confidence 4789999999999999999999999987 67765543
No 450
>PRK13243 glyoxylate reductase; Reviewed
Probab=94.36 E-value=0.33 Score=38.97 Aligned_cols=38 Identities=16% Similarity=0.043 Sum_probs=32.8
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
..+.|+++.|.| .|.||+.+++.|...| .+|++.+|..
T Consensus 146 ~~L~gktvgIiG-~G~IG~~vA~~l~~~G---~~V~~~d~~~ 183 (333)
T PRK13243 146 YDVYGKTIGIIG-FGRIGQAVARRAKGFG---MRILYYSRTR 183 (333)
T ss_pred cCCCCCEEEEEC-cCHHHHHHHHHHHHCC---CEEEEECCCC
Confidence 357899999999 6999999999999988 5888888764
No 451
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.36 E-value=0.16 Score=39.72 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=29.5
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEE
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM 69 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~ 69 (177)
.++||+++|.|.+..+|..++..|+++| ++|...
T Consensus 154 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~---AtVti~ 187 (281)
T PRK14183 154 DVKGKDVCVVGASNIVGKPMAALLLNAN---ATVDIC 187 (281)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCC---CEEEEe
Confidence 4689999999999999999999999887 566643
No 452
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.35 E-value=0.18 Score=39.42 Aligned_cols=35 Identities=11% Similarity=0.242 Sum_probs=30.0
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV 70 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~ 70 (177)
.+.|++++|.|.+..+|..++..|++.| ++|+..-
T Consensus 154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~---atVt~ch 188 (282)
T PRK14166 154 DLEGKDAVIIGASNIVGRPMATMLLNAG---ATVSVCH 188 (282)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCC---CEEEEeC
Confidence 3689999999999999999999999887 5776443
No 453
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=94.33 E-value=0.3 Score=37.25 Aligned_cols=32 Identities=28% Similarity=0.363 Sum_probs=26.9
Q ss_pred eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
+|+|.| .|++|..+++.|...|. .++..++.+
T Consensus 1 kVlvvG-~GGlG~eilk~La~~Gv--g~i~ivD~D 32 (234)
T cd01484 1 KVLLVG-AGGIGCELLKNLALMGF--GQIHVIDMD 32 (234)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCC--CeEEEEeCC
Confidence 478888 78899999999999885 788888775
No 454
>PRK14851 hypothetical protein; Provisional
Probab=94.28 E-value=0.21 Score=43.87 Aligned_cols=97 Identities=12% Similarity=0.128 Sum_probs=56.8
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCC-----CC---hHHHHHHHHhhhhhhcccccCcccCC
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG-----SS---PEERVKNMLNSVIFDRLNKEVPDFRS 103 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (177)
..+++.+|+|.| .|++|+++++.|...|. .+++.++.+.-. .+ ....+-........+++.+. + ...
T Consensus 39 ~kL~~~~VlIvG-~GGlGs~va~~Lar~GV--G~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~i-n-P~~ 113 (679)
T PRK14851 39 ERLAEAKVAIPG-MGGVGGVHLITMVRTGI--GRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSI-N-PFL 113 (679)
T ss_pred HHHhcCeEEEEC-cCHHHHHHHHHHHHhCC--CeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHh-C-CCC
Confidence 346788999999 78899999999999985 677777653210 00 00111000011111111111 1 123
Q ss_pred CeEEEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcc
Q psy17489 104 KIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAAS 140 (177)
Q Consensus 104 ~v~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~ 140 (177)
+++.+...++. +.+..+++++|+||.+.-.
T Consensus 114 ~I~~~~~~i~~-------~n~~~~l~~~DvVid~~D~ 143 (679)
T PRK14851 114 EITPFPAGINA-------DNMDAFLDGVDVVLDGLDF 143 (679)
T ss_pred eEEEEecCCCh-------HHHHHHHhCCCEEEECCCC
Confidence 55666666654 4677788999999987653
No 455
>PLN00203 glutamyl-tRNA reductase
Probab=94.28 E-value=0.16 Score=43.18 Aligned_cols=37 Identities=30% Similarity=0.474 Sum_probs=32.1
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
+.+++++|.|+ |.+|..+++.|...|. .+|++..|+.
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~--~~V~V~nRs~ 300 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGC--TKMVVVNRSE 300 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCC--CeEEEEeCCH
Confidence 66899999997 9999999999998873 5788888875
No 456
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=94.15 E-value=0.073 Score=35.07 Aligned_cols=36 Identities=19% Similarity=0.292 Sum_probs=29.6
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
.+++++++|+|| |-+|..-++.|++.| .+|++++..
T Consensus 4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~g---A~v~vis~~ 39 (103)
T PF13241_consen 4 DLKGKRVLVVGG-GPVAARKARLLLEAG---AKVTVISPE 39 (103)
T ss_dssp --TT-EEEEEEE-SHHHHHHHHHHCCCT---BEEEEEESS
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhCC---CEEEEECCc
Confidence 367899999996 889999999999998 788888875
No 457
>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein. Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.
Probab=94.14 E-value=0.35 Score=41.80 Aligned_cols=88 Identities=15% Similarity=0.207 Sum_probs=54.6
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE 113 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 113 (177)
.+.-+|+|.| .|.+|++++..|++.|. .++.+++-+.. .+...++.++.. . . +. ..+++.+-..+..
T Consensus 127 qR~akVlVlG-~Gg~~s~lv~sL~~sG~--~~I~~vd~D~v-~SNlnRIgEl~e-~-A----~~---~n~~v~v~~i~~~ 193 (637)
T TIGR03693 127 SRNAKILAAG-SGDFLTKLVRSLIDSGF--PRFHAIVTDAE-EHALDRIHELAE-I-A----EE---TDDALLVQEIDFA 193 (637)
T ss_pred hhcccEEEEe-cCchHHHHHHHHHhcCC--CcEEEEecccc-chhhhHHHHHHH-H-H----HH---hCCCCceEeccCC
Confidence 4567899999 67788999999999986 56666643322 121132222211 0 0 00 1234444444544
Q ss_pred CCCCCCCHHHHHHHhcCCcEEEEcCcc
Q psy17489 114 SEHLGLSEDSEQLIKSKVNIIFHCAAS 140 (177)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~ 140 (177)
.. +++...+++.|+|++.+.-
T Consensus 194 ~~------~dl~ev~~~~DiVi~vsDd 214 (637)
T TIGR03693 194 ED------QHLHEAFEPADWVLYVSDN 214 (637)
T ss_pred cc------hhHHHhhcCCcEEEEECCC
Confidence 44 6788889999999999874
No 458
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.11 E-value=0.19 Score=39.41 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=29.5
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEE
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM 69 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~ 69 (177)
.+.||+++|.|.+..+|..++..|++.| ++|...
T Consensus 156 ~l~GK~vvViGrS~iVGkPla~lL~~~~---ATVtic 189 (288)
T PRK14171 156 NLTGKNVVIIGRSNIVGKPLSALLLKEN---CSVTIC 189 (288)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCC---CEEEEe
Confidence 4689999999999999999999999887 566643
No 459
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.07 E-value=0.21 Score=39.14 Aligned_cols=35 Identities=23% Similarity=0.279 Sum_probs=30.1
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV 70 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~ 70 (177)
.++||+++|.|.+..+|..++..|++.| ++|.+.-
T Consensus 154 ~l~Gk~vvViGrS~iVGkPla~lL~~~~---AtVtich 188 (282)
T PRK14182 154 DPKGKRALVVGRSNIVGKPMAMMLLERH---ATVTIAH 188 (282)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCC---CEEEEeC
Confidence 3689999999999999999999999887 5666543
No 460
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=94.06 E-value=0.58 Score=36.90 Aligned_cols=37 Identities=8% Similarity=0.021 Sum_probs=30.8
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
..|.+++|+||+|.+|..+++.+...| .+|++.++++
T Consensus 137 ~~g~~VLI~ga~g~vG~~aiqlAk~~G---~~Vi~~~~s~ 173 (325)
T TIGR02825 137 KGGETVMVNAAAGAVGSVVGQIAKLKG---CKVVGAAGSD 173 (325)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcC---CEEEEEeCCH
Confidence 357899999999999999988888787 5788877654
No 461
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=94.05 E-value=0.51 Score=37.05 Aligned_cols=37 Identities=14% Similarity=0.090 Sum_probs=31.1
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
..|.+++|+||+|.+|..+++.....| .+|++.++++
T Consensus 142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G---~~vi~~~~s~ 178 (329)
T cd08294 142 KAGETVVVNGAAGAVGSLVGQIAKIKG---CKVIGCAGSD 178 (329)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcC---CEEEEEeCCH
Confidence 457899999999999999988888888 5788877654
No 462
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.00 E-value=0.27 Score=38.44 Aligned_cols=37 Identities=16% Similarity=0.143 Sum_probs=31.7
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
.++|++++|.|.+..+|+.++..|...| ++|....++
T Consensus 149 ~l~Gk~V~ViGrs~~vGrpla~lL~~~~---atVtv~hs~ 185 (279)
T PRK14178 149 SIAGKRAVVVGRSIDVGRPMAALLLNAD---ATVTICHSK 185 (279)
T ss_pred CCCCCEEEEECCCccccHHHHHHHHhCC---CeeEEEecC
Confidence 4689999999999999999999999887 577766554
No 463
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=93.96 E-value=0.23 Score=39.25 Aligned_cols=35 Identities=14% Similarity=0.208 Sum_probs=30.6
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV 70 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~ 70 (177)
.+.|++++|.|.+..+|+.++..|+++| ++|+.+-
T Consensus 164 ~l~Gk~vvVIGRS~iVGkPla~lL~~~~---ATVtvch 198 (299)
T PLN02516 164 PIKGKKAVVVGRSNIVGLPVSLLLLKAD---ATVTVVH 198 (299)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCC---CEEEEeC
Confidence 4689999999999999999999999987 5776653
No 464
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=93.95 E-value=0.71 Score=28.55 Aligned_cols=34 Identities=24% Similarity=0.407 Sum_probs=28.5
Q ss_pred eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCC
Q psy17489 38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG 75 (177)
Q Consensus 38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~ 75 (177)
+++|.| +|++|..++..|.+.| .+|+.+.+++..
T Consensus 1 ~vvViG-gG~ig~E~A~~l~~~g---~~vtli~~~~~~ 34 (80)
T PF00070_consen 1 RVVVIG-GGFIGIELAEALAELG---KEVTLIERSDRL 34 (80)
T ss_dssp EEEEES-SSHHHHHHHHHHHHTT---SEEEEEESSSSS
T ss_pred CEEEEC-cCHHHHHHHHHHHHhC---cEEEEEeccchh
Confidence 356776 8999999999999998 689999887644
No 465
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=93.86 E-value=0.18 Score=39.50 Aligned_cols=36 Identities=17% Similarity=0.232 Sum_probs=31.0
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
.+++++|.| .|+.+++++..|++.|. .+|+++.|+.
T Consensus 125 ~~~~vlilG-AGGAarAv~~aL~~~g~--~~i~V~NRt~ 160 (283)
T COG0169 125 TGKRVLILG-AGGAARAVAFALAEAGA--KRITVVNRTR 160 (283)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHcCC--CEEEEEeCCH
Confidence 578999999 56688999999999984 7899999976
No 466
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=93.79 E-value=0.12 Score=41.69 Aligned_cols=35 Identities=14% Similarity=0.185 Sum_probs=27.9
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
.++|.|+||+|++|..+++.|++.. . .++..+.++
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p-~-~el~~~~~s 37 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHP-W-FEVTALAAS 37 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCC-C-ceEEEEEcC
Confidence 4689999999999999999998763 2 477776444
No 467
>PRK06487 glycerate dehydrogenase; Provisional
Probab=93.76 E-value=0.46 Score=37.89 Aligned_cols=36 Identities=11% Similarity=-0.075 Sum_probs=31.5
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
.+.|+++.|.| .|.||+.+++.+...| .+|++.+|.
T Consensus 145 ~l~gktvgIiG-~G~IG~~vA~~l~~fg---m~V~~~~~~ 180 (317)
T PRK06487 145 ELEGKTLGLLG-HGELGGAVARLAEAFG---MRVLIGQLP 180 (317)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHhhCC---CEEEEECCC
Confidence 47899999999 7999999999998887 588888775
No 468
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=93.75 E-value=0.34 Score=39.97 Aligned_cols=39 Identities=31% Similarity=0.375 Sum_probs=33.1
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
..+++++++|.| .|-+|.-++++|.+.|. ..|++..|..
T Consensus 174 ~~L~~~~vlvIG-AGem~~lva~~L~~~g~--~~i~IaNRT~ 212 (414)
T COG0373 174 GSLKDKKVLVIG-AGEMGELVAKHLAEKGV--KKITIANRTL 212 (414)
T ss_pred cccccCeEEEEc-ccHHHHHHHHHHHhCCC--CEEEEEcCCH
Confidence 447899999999 67899999999999884 7888888865
No 469
>PRK06932 glycerate dehydrogenase; Provisional
Probab=93.73 E-value=0.64 Score=37.02 Aligned_cols=36 Identities=14% Similarity=-0.001 Sum_probs=31.1
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
.+.|+++.|.| .|.||+.+++.+...| .+|++.+|.
T Consensus 144 ~l~gktvgIiG-~G~IG~~va~~l~~fg---~~V~~~~~~ 179 (314)
T PRK06932 144 DVRGSTLGVFG-KGCLGTEVGRLAQALG---MKVLYAEHK 179 (314)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHhcCC---CEEEEECCC
Confidence 47899999999 7999999999998887 588887764
No 470
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=93.72 E-value=0.14 Score=41.64 Aligned_cols=36 Identities=14% Similarity=0.268 Sum_probs=25.9
Q ss_pred ceEEEecCCcchHHHHHHHHHh-hCCCcCeEEEEEeC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLR-SFPDIGAIYIMVRD 72 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~-~g~~~~~v~~~~r~ 72 (177)
++|.|.||+|++|..+++.+++ ....+.+++.++.+
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~ 38 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTS 38 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecch
Confidence 5799999999999999995555 43333446665543
No 471
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=93.65 E-value=0.31 Score=42.29 Aligned_cols=72 Identities=18% Similarity=0.188 Sum_probs=50.8
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
.+++|.| .|-+|+.+++.|.+.| ..+++++.++ ++++...+ .....+.+|.+++
T Consensus 401 ~~vII~G-~Gr~G~~va~~L~~~g---~~vvvID~d~------~~v~~~~~---------------~g~~v~~GDat~~- 454 (601)
T PRK03659 401 PQVIIVG-FGRFGQVIGRLLMANK---MRITVLERDI------SAVNLMRK---------------YGYKVYYGDATQL- 454 (601)
T ss_pred CCEEEec-CchHHHHHHHHHHhCC---CCEEEEECCH------HHHHHHHh---------------CCCeEEEeeCCCH-
Confidence 5788888 7889999999999988 5788888765 33333321 3567899999987
Q ss_pred CCCCHHHHHHH-hcCCcEEEEcCc
Q psy17489 117 LGLSEDSEQLI-KSKVNIIFHCAA 139 (177)
Q Consensus 117 ~~~~~~~~~~~-~~~~d~vi~~aa 139 (177)
+.++++ +++++.++-+-.
T Consensus 455 -----~~L~~agi~~A~~vv~~~~ 473 (601)
T PRK03659 455 -----ELLRAAGAEKAEAIVITCN 473 (601)
T ss_pred -----HHHHhcCCccCCEEEEEeC
Confidence 555544 346777666544
No 472
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.61 E-value=0.27 Score=38.57 Aligned_cols=34 Identities=15% Similarity=0.134 Sum_probs=28.5
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHh--hCCCcCeEEEE
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLR--SFPDIGAIYIM 69 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~--~g~~~~~v~~~ 69 (177)
.+.||+++|.|.+..+|..++..|++ .| ++|...
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~~~---atVtvc 190 (284)
T PRK14193 155 ELAGAHVVVIGRGVTVGRPIGLLLTRRSEN---ATVTLC 190 (284)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHhhccCC---CEEEEe
Confidence 36799999999999999999999998 44 466544
No 473
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=93.58 E-value=0.65 Score=37.18 Aligned_cols=39 Identities=15% Similarity=0.094 Sum_probs=33.2
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 74 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~ 74 (177)
..+.||++.|.| .|-||+.+++.+...| .+|+..+|++.
T Consensus 142 ~~l~gktvGIiG-~GrIG~avA~r~~~Fg---m~v~y~~~~~~ 180 (324)
T COG1052 142 FDLRGKTLGIIG-LGRIGQAVARRLKGFG---MKVLYYDRSPN 180 (324)
T ss_pred cCCCCCEEEEEC-CCHHHHHHHHHHhcCC---CEEEEECCCCC
Confidence 357899999999 9999999999998666 58888888764
No 474
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=93.56 E-value=0.96 Score=28.86 Aligned_cols=35 Identities=31% Similarity=0.342 Sum_probs=26.1
Q ss_pred eEEEecCCcchHHHHHHHHHhhCCCcCeEEEE-EeCC
Q psy17489 38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-VRDK 73 (177)
Q Consensus 38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~-~r~~ 73 (177)
++.+. |+|-+|.+|+..|++.|..-.+|+.. +|++
T Consensus 1 kI~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~ 36 (96)
T PF03807_consen 1 KIGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSP 36 (96)
T ss_dssp EEEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSH
T ss_pred CEEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcH
Confidence 45667 59999999999999998434577744 6665
No 475
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=93.56 E-value=0.12 Score=44.10 Aligned_cols=36 Identities=22% Similarity=0.147 Sum_probs=31.0
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
+++++++|+|+ |++|++++..|.+.| .+|++++|+.
T Consensus 377 ~~~k~vlIlGa-GGagrAia~~L~~~G---~~V~i~nR~~ 412 (529)
T PLN02520 377 LAGKLFVVIGA-GGAGKALAYGAKEKG---ARVVIANRTY 412 (529)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCC---CEEEEEcCCH
Confidence 56789999998 799999999999998 4888888753
No 476
>PRK06849 hypothetical protein; Provisional
Probab=93.53 E-value=0.16 Score=41.51 Aligned_cols=36 Identities=14% Similarity=0.070 Sum_probs=31.9
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
+.|+|||||++..+|..+++.|-+.| .+|++++..+
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G---~~Vi~~d~~~ 38 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAG---HTVILADSLK 38 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCc
Confidence 46899999999999999999999999 5888887764
No 477
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=93.53 E-value=0.12 Score=42.00 Aligned_cols=36 Identities=14% Similarity=0.196 Sum_probs=28.5
Q ss_pred ceEEEecCCcchHHHHHHHHH-hhCCCcCeEEEEEeC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLL-RSFPDIGAIYIMVRD 72 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~-~~g~~~~~v~~~~r~ 72 (177)
++|.|.||+|-+|+.+++.|. +....+.+++.++.+
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~ 37 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTS 37 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEch
Confidence 478999999999999999998 655555666666543
No 478
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=93.49 E-value=0.69 Score=36.67 Aligned_cols=35 Identities=14% Similarity=0.038 Sum_probs=29.0
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
.+++|+||+|.+|..+++.....|. .+|+++++++
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~--~~Vi~~~~s~ 190 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGC--SRVVGICGSD 190 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCC--CEEEEEcCCH
Confidence 7999999999999999888877772 2788887654
No 479
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=93.46 E-value=0.58 Score=33.34 Aligned_cols=34 Identities=21% Similarity=0.182 Sum_probs=27.4
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
+++|.+.| .|-+|+.+++.|.+.| ..|++.+|++
T Consensus 1 m~~Ig~IG-lG~mG~~~a~~L~~~g---~~v~~~d~~~ 34 (163)
T PF03446_consen 1 MMKIGFIG-LGNMGSAMARNLAKAG---YEVTVYDRSP 34 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTT---TEEEEEESSH
T ss_pred CCEEEEEc-hHHHHHHHHHHHHhcC---CeEEeeccch
Confidence 46889999 6999999999999999 5888888765
No 480
>PRK07574 formate dehydrogenase; Provisional
Probab=93.41 E-value=0.37 Score=39.50 Aligned_cols=37 Identities=14% Similarity=0.109 Sum_probs=32.2
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
.+.||++.|.| .|-||+.+++.|...| .+|+..+|..
T Consensus 189 ~L~gktVGIvG-~G~IG~~vA~~l~~fG---~~V~~~dr~~ 225 (385)
T PRK07574 189 DLEGMTVGIVG-AGRIGLAVLRRLKPFD---VKLHYTDRHR 225 (385)
T ss_pred ecCCCEEEEEC-CCHHHHHHHHHHHhCC---CEEEEECCCC
Confidence 47899999999 6889999999999888 5888888764
No 481
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=93.40 E-value=0.16 Score=36.16 Aligned_cols=38 Identities=8% Similarity=0.030 Sum_probs=31.0
Q ss_pred cccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489 29 KVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV 70 (177)
Q Consensus 29 ~~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~ 70 (177)
+++-.++|++++|.| +|-+|...++.|++.| +.|.+++
T Consensus 6 P~~l~l~~~~vlVvG-GG~va~rka~~Ll~~g---a~V~VIs 43 (157)
T PRK06719 6 PLMFNLHNKVVVIIG-GGKIAYRKASGLKDTG---AFVTVVS 43 (157)
T ss_pred ceEEEcCCCEEEEEC-CCHHHHHHHHHHHhCC---CEEEEEc
Confidence 444557899999999 6789999999999998 5776664
No 482
>PRK06436 glycerate dehydrogenase; Provisional
Probab=93.35 E-value=0.75 Score=36.48 Aligned_cols=37 Identities=16% Similarity=0.097 Sum_probs=31.8
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
.+.|+++.|.| .|.||+.+++.+...| .+|++.+|+.
T Consensus 119 ~L~gktvgIiG-~G~IG~~vA~~l~afG---~~V~~~~r~~ 155 (303)
T PRK06436 119 LLYNKSLGILG-YGGIGRRVALLAKAFG---MNIYAYTRSY 155 (303)
T ss_pred CCCCCEEEEEC-cCHHHHHHHHHHHHCC---CEEEEECCCC
Confidence 57899999999 7999999999887777 5888888863
No 483
>PLN02928 oxidoreductase family protein
Probab=93.34 E-value=0.92 Score=36.67 Aligned_cols=37 Identities=19% Similarity=0.169 Sum_probs=32.5
Q ss_pred ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
..+.|+++.|.| .|-||+.+++.|...| .+|++.+|+
T Consensus 155 ~~l~gktvGIiG-~G~IG~~vA~~l~afG---~~V~~~dr~ 191 (347)
T PLN02928 155 DTLFGKTVFILG-YGAIGIELAKRLRPFG---VKLLATRRS 191 (347)
T ss_pred cCCCCCEEEEEC-CCHHHHHHHHHHhhCC---CEEEEECCC
Confidence 357899999999 7999999999999888 588888876
No 484
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=93.33 E-value=1.2 Score=34.48 Aligned_cols=35 Identities=17% Similarity=0.212 Sum_probs=24.4
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
+++.|.| .|.+|..+++.|.+.+.++.-+.+.+|+
T Consensus 2 mrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~ 36 (265)
T PRK13304 2 LKIGIVG-CGAIASLITKAILSGRINAELYAFYDRN 36 (265)
T ss_pred CEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCC
Confidence 5799999 5999999999998763223234444554
No 485
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=93.32 E-value=0.82 Score=35.35 Aligned_cols=37 Identities=16% Similarity=0.235 Sum_probs=31.8
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
..+++++|+|++|.+|..+++.+...| .+|++.++++
T Consensus 143 ~~g~~vlI~g~~~~~g~~~~~~a~~~g---~~v~~~~~~~ 179 (325)
T cd08253 143 KAGETVLVHGGSGAVGHAAVQLARWAG---ARVIATASSA 179 (325)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC---CEEEEEeCCH
Confidence 457899999999999999999998888 5788887754
No 486
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=93.29 E-value=0.32 Score=39.31 Aligned_cols=35 Identities=17% Similarity=0.154 Sum_probs=30.1
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV 70 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~ 70 (177)
.++||+++|.|.+..+|..++..|++.| ++|.+.-
T Consensus 228 ~l~GK~vvVIGRS~iVGkPLa~LL~~~~---ATVTicH 262 (364)
T PLN02616 228 EIKGKRAVVIGRSNIVGMPAALLLQRED---ATVSIVH 262 (364)
T ss_pred CCCCCEEEEECCCccccHHHHHHHHHCC---CeEEEeC
Confidence 4689999999999999999999999987 5666543
No 487
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=93.29 E-value=0.75 Score=36.85 Aligned_cols=35 Identities=26% Similarity=0.256 Sum_probs=28.7
Q ss_pred CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
.+.+++|+|+ |.+|...++.+...| .+|++++|++
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G---~~vi~~~~~~ 206 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRG---FEVYVLNRRD 206 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcC---CeEEEEecCC
Confidence 5789999985 999999888777777 4788888853
No 488
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=93.25 E-value=0.22 Score=36.55 Aligned_cols=33 Identities=24% Similarity=0.239 Sum_probs=25.7
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
|+|.|.| .|++|..++..|.+.| .+|++++.++
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA~~G---~~V~g~D~~~ 33 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALAEKG---HQVIGVDIDE 33 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTT---SEEEEE-S-H
T ss_pred CEEEEEC-CCcchHHHHHHHHhCC---CEEEEEeCCh
Confidence 6788886 9999999999999999 6999998754
No 489
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.21 E-value=0.34 Score=38.03 Aligned_cols=37 Identities=16% Similarity=0.402 Sum_probs=29.7
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCC--CcCeEEEEE
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFP--DIGAIYIMV 70 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~--~~~~v~~~~ 70 (177)
.++||+++|.|.+..+|+.++..|+++|. + ++|.+.-
T Consensus 150 ~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~-AtVtvch 188 (287)
T PRK14181 150 PLHGRHVAIVGRSNIVGKPLAALLMQKHPDTN-ATVTLLH 188 (287)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHhCcCCCC-CEEEEeC
Confidence 46899999999999999999999998831 1 4666543
No 490
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=93.20 E-value=0.36 Score=38.81 Aligned_cols=35 Identities=14% Similarity=0.090 Sum_probs=29.8
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV 70 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~ 70 (177)
.++||+++|.|.+..+|..++..|++.| ++|.++-
T Consensus 211 ~l~GK~vvVIGRS~iVGkPla~LL~~~~---ATVTicH 245 (345)
T PLN02897 211 EIAGKNAVVIGRSNIVGLPMSLLLQRHD---ATVSTVH 245 (345)
T ss_pred CCCCCEEEEECCCccccHHHHHHHHHCC---CEEEEEc
Confidence 3689999999999999999999999887 5665543
No 491
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.16 E-value=0.43 Score=37.49 Aligned_cols=36 Identities=17% Similarity=0.123 Sum_probs=30.1
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHh----hCCCcCeEEEEEe
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLR----SFPDIGAIYIMVR 71 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~----~g~~~~~v~~~~r 71 (177)
.++||+++|.|.+..+|..++..|++ .| ++|.+...
T Consensus 154 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~---AtVt~~hs 193 (286)
T PRK14184 154 SPAGKKAVVVGRSNIVGKPLALMLGAPGKFAN---ATVTVCHS 193 (286)
T ss_pred CCCCCEEEEECCCccchHHHHHHHhCCcccCC---CEEEEEeC
Confidence 36899999999999999999999998 55 56666544
No 492
>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3. UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=93.15 E-value=0.74 Score=36.28 Aligned_cols=89 Identities=21% Similarity=0.225 Sum_probs=50.6
Q ss_pred eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC-----CCC---hHHHHHHHHhhhhhhcccccCcccCCCeEEEe
Q psy17489 38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK-----GSS---PEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP 109 (177)
Q Consensus 38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 109 (177)
+|+|.| .|++|..+++.|...|. .++.+++.+.- .++ ..+.+-+.......+.+.+.-+ .-++..+.
T Consensus 1 kVlVVG-aGGlG~eilknLal~Gv--g~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np--~v~I~~~~ 75 (291)
T cd01488 1 KILVIG-AGGLGCELLKNLALSGF--RNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVP--GVNVTPHF 75 (291)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCC--CeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCC--CCEEEEEe
Confidence 478888 77899999999999885 78887765421 011 1122221112222222222111 13455666
Q ss_pred CCCCCCCCCCCHHHHHHHhcCCcEEEEcCc
Q psy17489 110 SNLESEHLGLSEDSEQLIKSKVNIIFHCAA 139 (177)
Q Consensus 110 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa 139 (177)
.++.+. -...++++|+||.+..
T Consensus 76 ~~i~~~--------~~~f~~~fdvVi~alD 97 (291)
T cd01488 76 GKIQDK--------DEEFYRQFNIIICGLD 97 (291)
T ss_pred cccCch--------hHHHhcCCCEEEECCC
Confidence 666543 1456788999998755
No 493
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.09 E-value=0.34 Score=38.25 Aligned_cols=27 Identities=19% Similarity=0.391 Sum_probs=25.1
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhh
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRS 59 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~ 59 (177)
.++||+++|.|.+..+|..++..|++.
T Consensus 154 ~l~Gk~vvViGrS~iVGkPla~lL~~~ 180 (297)
T PRK14167 154 DTEGADVVVVGRSDIVGKPMANLLIQK 180 (297)
T ss_pred CCCCCEEEEECCCcccHHHHHHHHhcC
Confidence 368999999999999999999999987
No 494
>PRK14852 hypothetical protein; Provisional
Probab=93.07 E-value=0.37 Score=43.89 Aligned_cols=96 Identities=13% Similarity=0.110 Sum_probs=55.4
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCC--------ChHHHHHHHHhhhhhhcccccCcccCCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS--------SPEERVKNMLNSVIFDRLNKEVPDFRSK 104 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (177)
.++..+|+|.| .|++|+.+++.|...|. .+++.++-+.-.. .....+-+.......+++.+. + ..-+
T Consensus 329 kL~~srVlVvG-lGGlGs~ia~~LAraGV--G~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~I-N-P~v~ 403 (989)
T PRK14852 329 RLLRSRVAIAG-LGGVGGIHLMTLARTGI--GNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSV-N-PFLD 403 (989)
T ss_pred HHhcCcEEEEC-CcHHHHHHHHHHHHcCC--CeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHH-C-CCCe
Confidence 46678999999 77899999999999984 7787776542100 000111111111111111111 1 1134
Q ss_pred eEEEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcc
Q psy17489 105 IQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAAS 140 (177)
Q Consensus 105 v~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~ 140 (177)
++.+...+.. +.+..+++++|+||.+...
T Consensus 404 I~~~~~~I~~-------en~~~fl~~~DiVVDa~D~ 432 (989)
T PRK14852 404 IRSFPEGVAA-------ETIDAFLKDVDLLVDGIDF 432 (989)
T ss_pred EEEEecCCCH-------HHHHHHhhCCCEEEECCCC
Confidence 5555555544 4677788999999987654
No 495
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=93.06 E-value=0.2 Score=41.60 Aligned_cols=37 Identities=19% Similarity=0.188 Sum_probs=32.0
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
.+.|++++|+| .|.+|..+++.+...| .+|++.++++
T Consensus 209 ~l~Gk~VlViG-~G~IG~~vA~~lr~~G---a~ViV~d~dp 245 (425)
T PRK05476 209 LIAGKVVVVAG-YGDVGKGCAQRLRGLG---ARVIVTEVDP 245 (425)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHhCC---CEEEEEcCCc
Confidence 35899999999 5899999999999998 5888888765
No 496
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.92 E-value=0.42 Score=37.73 Aligned_cols=37 Identities=16% Similarity=0.323 Sum_probs=29.4
Q ss_pred cCCCceEEEecCCcchHHHHHHHHHhhCCC-cCeEEEE
Q psy17489 33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPD-IGAIYIM 69 (177)
Q Consensus 33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~-~~~v~~~ 69 (177)
.+.|++++|.|.+..+|..++..|++.|.+ -++|.+.
T Consensus 158 ~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~ 195 (297)
T PRK14168 158 ETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIV 195 (297)
T ss_pred CCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEe
Confidence 468999999999999999999999987310 1566554
No 497
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=92.92 E-value=0.62 Score=35.31 Aligned_cols=38 Identities=26% Similarity=0.410 Sum_probs=28.2
Q ss_pred CCCceEEEecCCcchHHHHHHHHHhhCC-CcCeEEEEEeC
Q psy17489 34 YRDGQILVTGGTGFMGKLLIDKLLRSFP-DIGAIYIMVRD 72 (177)
Q Consensus 34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~-~~~~v~~~~r~ 72 (177)
+++++|.|.| +|.+|..++..|.+.|. .+..+++.+|+
T Consensus 2 m~~~kI~iIG-~G~mg~ala~~l~~~~~~~~~~i~~~~~~ 40 (245)
T PRK07634 2 LKKHRILFIG-AGRMAEAIFSGLLKTSKEYIEEIIVSNRS 40 (245)
T ss_pred CCCCeEEEEC-cCHHHHHHHHHHHhCCCCCcCeEEEECCC
Confidence 3567899998 68999999999988763 23346666654
No 498
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=92.86 E-value=0.48 Score=41.30 Aligned_cols=72 Identities=14% Similarity=0.257 Sum_probs=49.9
Q ss_pred ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489 37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH 116 (177)
Q Consensus 37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 116 (177)
.+++|.| .|-+|+.+++.|.+.| ..+++++.++ ++++...+ .....+.+|.+++
T Consensus 401 ~~vII~G-~Gr~G~~va~~L~~~g---~~vvvID~d~------~~v~~~~~---------------~g~~v~~GDat~~- 454 (621)
T PRK03562 401 PRVIIAG-FGRFGQIVGRLLLSSG---VKMTVLDHDP------DHIETLRK---------------FGMKVFYGDATRM- 454 (621)
T ss_pred CcEEEEe-cChHHHHHHHHHHhCC---CCEEEEECCH------HHHHHHHh---------------cCCeEEEEeCCCH-
Confidence 5788888 7889999999999988 4778887765 33433321 3567899999987
Q ss_pred CCCCHHHHHHH-hcCCcEEEEcCc
Q psy17489 117 LGLSEDSEQLI-KSKVNIIFHCAA 139 (177)
Q Consensus 117 ~~~~~~~~~~~-~~~~d~vi~~aa 139 (177)
+-++++ +++++.+|-+-.
T Consensus 455 -----~~L~~agi~~A~~vvv~~~ 473 (621)
T PRK03562 455 -----DLLESAGAAKAEVLINAID 473 (621)
T ss_pred -----HHHHhcCCCcCCEEEEEeC
Confidence 444443 346777766543
No 499
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=92.86 E-value=1.3 Score=34.25 Aligned_cols=37 Identities=27% Similarity=0.381 Sum_probs=28.9
Q ss_pred CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489 36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73 (177)
Q Consensus 36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~ 73 (177)
+++|.|.|++|-+|+.+++.+.+.. +..=+-+++|.+
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~-~~~L~aa~~~~~ 38 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAP-DLELVAAFDRPG 38 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCC-CceEEEEEecCC
Confidence 4689999999999999999998874 444455556654
No 500
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=92.85 E-value=1.4 Score=33.38 Aligned_cols=40 Identities=15% Similarity=0.212 Sum_probs=30.7
Q ss_pred cccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489 29 KVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72 (177)
Q Consensus 29 ~~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~ 72 (177)
+++-.+++++|+|.| +|-++..=+..|++.| ++|++++..
T Consensus 18 pi~l~~~~~~VLVVG-GG~VA~RK~~~Ll~~g---A~VtVVap~ 57 (223)
T PRK05562 18 FISLLSNKIKVLIIG-GGKAAFIKGKTFLKKG---CYVYILSKK 57 (223)
T ss_pred eeEEECCCCEEEEEC-CCHHHHHHHHHHHhCC---CEEEEEcCC
Confidence 334446789999999 5778888889999988 677777654
Done!