BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17490
(67 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7ZXF5|FACR1_XENLA Fatty acyl-CoA reductase 1 OS=Xenopus laevis GN=far1 PE=2 SV=1
Length = 515
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 43/58 (74%)
Query: 7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN 64
+ +FY+ +L+TG TGFMGK+L++KLLRS P+ A+Y++VR K G P ERV M++
Sbjct: 4 IPEFYQGKNVLITGATGFMGKVLLEKLLRSCPNTKAVYVLVRHKAGQKPRERVAEMMS 61
>sp|Q922J9|FACR1_MOUSE Fatty acyl-CoA reductase 1 OS=Mus musculus GN=Far1 PE=1 SV=1
Length = 515
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 46/59 (77%)
Query: 7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNS 65
+ ++Y IL+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+S
Sbjct: 4 IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPRVNSVYVLVRQKAGQTPQERVEEILSS 62
>sp|Q66H50|FACR1_RAT Fatty acyl-CoA reductase 1 OS=Rattus norvegicus GN=Far1 PE=2 SV=1
Length = 515
Score = 70.1 bits (170), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 45/58 (77%)
Query: 7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN 64
+ ++Y IL+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+
Sbjct: 4 IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILS 61
>sp|Q5R834|FACR1_PONAB Fatty acyl-CoA reductase 1 OS=Pongo abelii GN=FAR1 PE=2 SV=1
Length = 515
Score = 69.3 bits (168), Expect = 7e-12, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 45/58 (77%)
Query: 7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN 64
+ ++Y +L+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+
Sbjct: 4 IPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLS 61
>sp|Q8WVX9|FACR1_HUMAN Fatty acyl-CoA reductase 1 OS=Homo sapiens GN=FAR1 PE=1 SV=1
Length = 515
Score = 69.3 bits (168), Expect = 7e-12, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 45/58 (77%)
Query: 7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN 64
+ ++Y +L+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+
Sbjct: 4 IPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLS 61
>sp|Q5ZM72|FACR1_CHICK Fatty acyl-CoA reductase 1 OS=Gallus gallus GN=FAR1 PE=2 SV=1
Length = 515
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 42/56 (75%)
Query: 7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNM 62
+ ++Y +L+TG TGFMGK+L++KLLRS P + A+Y++VR K G +PE R++ +
Sbjct: 4 IPEYYEGKNVLLTGATGFMGKVLLEKLLRSCPKVKAVYVLVRPKAGQTPEARIEEI 59
>sp|Q7TNT2|FACR2_MOUSE Fatty acyl-CoA reductase 2 OS=Mus musculus GN=Far2 PE=2 SV=1
Length = 515
Score = 66.2 bits (160), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 41/56 (73%)
Query: 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNS 65
FY + IL+TG TGF+GK+L++KL R+ P + IYI+VR K G + +ERV +LNS
Sbjct: 7 FYSNKSILITGATGFLGKVLMEKLFRTSPHLKVIYILVRPKSGQTLQERVFQILNS 62
>sp|A1ZAI3|FACR2_DROME Putative fatty acyl-CoA reductase CG8303 OS=Drosophila melanogaster
GN=CG8303 PE=2 SV=2
Length = 620
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 40/57 (70%)
Query: 7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNML 63
+ +F+ I VTGGTGF+G +LI+ LL + PDIG IY++VR K+ P ER++ +L
Sbjct: 116 IPEFFAHKNIFVTGGTGFLGTVLIEALLDTHPDIGTIYVLVRGKRKFDPNERIRRLL 172
>sp|Q0P5J1|FACR2_BOVIN Fatty acyl-CoA reductase 2 OS=Bos taurus GN=FAR2 PE=2 SV=1
Length = 515
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 42/56 (75%)
Query: 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNS 65
FY IL+TG TGFMGK+L++KL R+ PD+ +YI+VR K+G + ++RV +L+S
Sbjct: 7 FYGGKSILITGATGFMGKVLMEKLFRTSPDLKVVYILVRPKQGQTLQQRVFQILDS 62
>sp|A1ZAI5|FACR1_DROME Putative fatty acyl-CoA reductase CG5065 OS=Drosophila melanogaster
GN=CG5065 PE=3 SV=1
Length = 625
Score = 65.5 bits (158), Expect = 9e-11, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 41/59 (69%)
Query: 7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNS 65
+ FY + +TGGTGFMGK+L++KLLRS P+I IY+++R K+G R+ +LN+
Sbjct: 119 IAQFYAGRSVFITGGTGFMGKVLVEKLLRSCPEIRNIYLLIRPKRGQEVSARLTELLNA 177
>sp|Q96K12|FACR2_HUMAN Fatty acyl-CoA reductase 2 OS=Homo sapiens GN=FAR2 PE=2 SV=1
Length = 515
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 41/56 (73%)
Query: 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNS 65
FY IL+TG TGF+GK+L++KL R+ PD+ IYI+VR K G + ++RV +L+S
Sbjct: 7 FYGGKSILITGATGFLGKVLMEKLFRTSPDLKVIYILVRPKAGQTLQQRVFQILDS 62
>sp|Q960W6|FACR3_DROME Putative fatty acyl-CoA reductase CG8306 OS=Drosophila
melanogaster GN=CG8306 PE=2 SV=1
Length = 516
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 40/56 (71%)
Query: 7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNM 62
+ DFY + +TG TGF+G +++KLLR P++G +Y+++R KKG S +ER++ +
Sbjct: 6 ITDFYAGRNVFITGATGFVGVTIVEKLLRDVPNVGTLYLLMRAKKGKSVQERLEEL 61
>sp|Q08891|FACR2_ARATH Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana GN=FAR2 PE=2
SV=2
Length = 616
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 40/61 (65%)
Query: 1 MQEEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVK 60
M+E + F + + L+TG TGF+ K+LI+K+LR PD+ IY++++ K + ER+K
Sbjct: 118 MKEGLGIISFLQGKKFLITGSTGFLAKVLIEKVLRMAPDVSKIYLLIKAKSKEAAIERLK 177
Query: 61 N 61
N
Sbjct: 178 N 178
>sp|Q0WRB0|FACR5_ARATH Probable fatty acyl-CoA reductase 5 OS=Arabidopsis thaliana
GN=FAR5 PE=2 SV=1
Length = 496
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKN 61
F R+ ILVTG TGF+ K+ ++K+LR P++ +Y++VR + +R++
Sbjct: 8 FLRNKTILVTGATGFLAKVFVEKILRVQPNVKKLYLLVRASDNEAATKRLRT 59
>sp|Q9FMQ9|FACR7_ARATH Putative fatty acyl-CoA reductase 7 OS=Arabidopsis thaliana
GN=FAR7 PE=3 SV=1
Length = 409
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 4 EQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEER 58
E F + ILVTG +GF+ K+L++++LR P++ +Y++VR S E+R
Sbjct: 2 EPNCVQFLENRTILVTGASGFLAKVLVERILRLQPNVKRLYLLVRASDKKSAEQR 56
>sp|Q1PEI6|FACR8_ARATH Fatty acyl-CoA reductase 8 OS=Arabidopsis thaliana GN=FAR8 PE=2
SV=1
Length = 496
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%)
Query: 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVK 60
F ++ ILVTG TGF+ K+ ++K+LR P++ +Y++VR + +R++
Sbjct: 8 FLQNKTILVTGATGFLAKVFVEKILRVQPNVNKLYLVVRASDNEAATKRLR 58
>sp|Q9XGY7|FAR_SIMCH Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis
PE=1 SV=1
Length = 493
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 1 MQEEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVK 60
M+E + +F + ILVTG TG + K+ ++K+LRS P++ +Y+++R + R++
Sbjct: 1 MEEMGSILEFLDNKAILVTGATGSLAKIFVEKVLRSQPNVKKLYLLLRATDDETAALRLQ 60
Query: 61 N 61
N
Sbjct: 61 N 61
>sp|B9TSP7|FACR6_ARATH Fatty acyl-CoA reductase 6, chloroplastic OS=Arabidopsis thaliana
GN=FAR6 PE=2 SV=1
Length = 548
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERV 59
F LVTG TGF+ K+LI+KLLR +IG I++++R K S +R+
Sbjct: 80 FLEGKSYLVTGATGFLAKVLIEKLLRESLEIGKIFLLMRSKDQESANKRL 129
>sp|Q39152|FACR1_ARATH Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana GN=FAR1 PE=2
SV=1
Length = 491
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 4 EQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKN 61
E F + IL+TG GF+ K+L++K+LR P++ IY+++R S +R+++
Sbjct: 2 ESNCVQFLGNKTILITGAPGFLAKVLVEKILRLQPNVKKIYLLLRAPDEKSAMQRLRS 59
>sp|Q93ZB9|FACR3_ARATH Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana GN=FAR3 PE=2
SV=1
Length = 493
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 11 YRDGQ-ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEER 58
Y D + ILV G GF+ + ++K+LR P++ +Y+++R KG S +R
Sbjct: 13 YLDNKSILVVGAAGFLANIFVEKILRVAPNVKKLYLLLRASKGKSATQR 61
>sp|B0G138|PKS21_DICDI Probable polyketide synthase 21 OS=Dictyostelium discoideum GN=pks21
PE=3 SV=1
Length = 2779
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51
DF D ++ +TG TGF+G L+ L++S P+ +Y ++R+KK
Sbjct: 2405 DFRNDSKVFLTGATGFLGVHLLSNLIKS-PNCSVVYCLIRNKK 2446
>sp|Q54T36|PKS19_DICDI Probable polyketide synthase 19 OS=Dictyostelium discoideum GN=pks19
PE=3 SV=1
Length = 2778
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51
DF D ++ +TG TGF+G L+ L++S P+ +Y ++R+KK
Sbjct: 2404 DFRNDSKVFLTGATGFLGVHLLSNLIKS-PNCSVVYCLIRNKK 2445
>sp|Q9LXN3|FACR4_ARATH Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana
GN=FAR4 PE=2 SV=1
Length = 493
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEER 58
F D ILVTG GF+ K+ ++K+LR P + +++++R S +R
Sbjct: 8 FLHDKTILVTGVPGFLAKVFVEKILRIQPKVKKLFLLLRAADNESAMQR 56
>sp|Q58461|Y1061_METJA Uncharacterized membrane protein MJ1061 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1061 PE=3 SV=1
Length = 333
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 5 QKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFP 38
Q + +FY+D ILVTGGTG +GK ++ LL+ P
Sbjct: 3 QDISNFYKDKTILVTGGTGSIGKEIVKTLLKFNP 36
>sp|P75517|GALE_MYCPN UDP-glucose 4-epimerase OS=Mycoplasma pneumoniae (strain ATCC
29342 / M129) GN=galE PE=3 SV=1
Length = 338
Score = 35.4 bits (80), Expect = 0.095, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 15 QILVTGGTGFMGKLLIDKLLRSFPDI 40
++LV GG G++G ID+LL+ +PD+
Sbjct: 7 KVLVLGGLGYIGSCFIDQLLKQYPDV 32
>sp|Q9LPG6|RHM2_ARATH Probable rhamnose biosynthetic enzyme 2 OS=Arabidopsis thaliana
GN=RHM2 PE=1 SV=1
Length = 667
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50
D Y+ IL+TG GF+ + ++L+R++PD I+V DK
Sbjct: 3 DTTYKPKNILITGAAGFIASHVANRLIRNYPDYK---IVVLDK 42
>sp|Q9LH76|RHM3_ARATH Probable rhamnose biosynthetic enzyme 3 OS=Arabidopsis thaliana
GN=RHM3 PE=1 SV=1
Length = 664
Score = 33.5 bits (75), Expect = 0.42, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50
Y+ IL+TG GF+ + ++L+RS+PD I+V DK
Sbjct: 4 YKPKNILITGAAGFIASHVANRLVRSYPDYK---IVVLDK 40
>sp|B0G0Z9|PKS6_DICDI Probable polyketide synthase 6 OS=Dictyostelium discoideum GN=pks6
PE=3 SV=1
Length = 2924
Score = 32.7 bits (73), Expect = 0.68, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK-KGSSPEERVKNML 63
IL+TG TGF+G L+ +LR IY ++R+K K S P + + N L
Sbjct: 2553 ILLTGTTGFLGGFLLFNMLR-LDSCKLIYCLIRNKSKSSYPLDEIINNL 2600
>sp|Q9SYM5|RHM1_ARATH Probable rhamnose biosynthetic enzyme 1 OS=Arabidopsis thaliana
GN=RHM1 PE=1 SV=1
Length = 669
Score = 32.3 bits (72), Expect = 0.86, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50
Y IL+TG GF+ + ++L+RS+PD I+V DK
Sbjct: 4 YTPKNILITGAAGFIASHVANRLIRSYPDYK---IVVLDK 40
>sp|Q57664|GALE_METJA Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 /
NBRC 100440) GN=MJ0211 PE=3 SV=1
Length = 305
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDI 40
ILVTGG GF+G ++DKL+ + D+
Sbjct: 2 ILVTGGAGFIGSHIVDKLIENNYDV 26
>sp|P37693|HETM_NOSS1 Polyketide synthase HetM OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=hetM PE=3 SV=1
Length = 506
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNML 63
++ +TGGTGF+G LI +LL+ +Y +VR + + +++ L
Sbjct: 136 KVFLTGGTGFLGAFLIRELLQQTQ--ADVYCLVRAADAQAGKAKIQTNL 182
>sp|A8GRN9|CAPD_RICRS UDP-glucose 4-epimerase OS=Rickettsia rickettsii (strain Sheila
Smith) GN=capD PE=3 SV=1
Length = 341
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 11 YRDGQILVTGGTGFMGKLLIDKLLRS--FPDIGAIYIMVRDKK 51
+ D +++TGGTG G ++ + L+S DI I I RD+K
Sbjct: 2 FVDKTLMITGGTGSFGNAVLSRFLKSGIINDIKEIRIFSRDEK 44
>sp|A8F1A5|CAPD_RICM5 UDP-glucose 4-epimerase OS=Rickettsia massiliae (strain Mtu5)
GN=capD PE=3 SV=2
Length = 341
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 11 YRDGQILVTGGTGFMGKLLIDKLLRS--FPDIGAIYIMVRDKK 51
+ D +++TGGTG G ++ + L+S DI I I RD+K
Sbjct: 2 FVDKTLMITGGTGSFGNAVLSRFLKSDIINDIKEIRIFSRDEK 44
>sp|Q86AE3|PKS9_DICDI Probable polyketide synthase 9/36 OS=Dictyostelium discoideum GN=pks9
PE=2 SV=1
Length = 2931
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK-KGSSPEERVKNML 63
IL+TG TGF+G L+ ++R IY ++R+K K ++P + + N L
Sbjct: 2555 ILLTGTTGFLGGFLLFNMVR-LDSCKLIYCLIRNKSKSNNPLDEIINNL 2602
>sp|Q92IG3|CAPD_RICCN UDP-glucose 4-epimerase OS=Rickettsia conorii (strain ATCC VR-613
/ Malish 7) GN=capD PE=3 SV=1
Length = 341
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 11 YRDGQILVTGGTGFMGKLLIDKLLRS--FPDIGAIYIMVRDKK 51
+ D +++TGGTG G ++ + L+S DI I I RD+K
Sbjct: 2 FVDKTLMITGGTGSFGNAVLSRFLKSGIINDIKEIRIFSRDEK 44
>sp|Q03132|ERYA2_SACER Erythronolide synthase, modules 3 and 4 OS=Saccharopolyspora
erythraea GN=eryA PE=1 SV=3
Length = 3567
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS 53
DG +L+TGGTG +G+LL L+ G ++++ ++G+
Sbjct: 3140 DGTVLITGGTGTLGRLLARHLVTEH---GVRHLLLVSRRGA 3177
>sp|A8GWP0|CAPD_RICB8 UDP-glucose 4-epimerase OS=Rickettsia bellii (strain OSU 85-389)
GN=capD PE=3 SV=1
Length = 341
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 11 YRDGQILVTGGTGFMGKLLIDKLLRS--FPDIGAIYIMVRDKK 51
+ D +L+TGGTG G ++ + L++ DI I I RD+K
Sbjct: 2 FVDKTLLITGGTGSFGNAVLSRFLKNDIIKDIKEIRIFSRDEK 44
>sp|A8GN21|CAPD_RICAH UDP-glucose 4-epimerase OS=Rickettsia akari (strain Hartford)
GN=capD PE=3 SV=1
Length = 341
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 11 YRDGQILVTGGTGFMGKLLIDKLLRS--FPDIGAIYIMVRDKK 51
+ D +++TGGTG G ++ + L+S DI I I RD+K
Sbjct: 2 FVDKTLMITGGTGSFGNAVLSRFLKSDIINDIKEIRIFSRDEK 44
>sp|A4XL45|MIAA_CALS8 tRNA dimethylallyltransferase OS=Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903) GN=miaA
PE=3 SV=1
Length = 312
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 7 VDDFYRDGQI-LVTGGTGFMGKLLIDKLLRSFPDIG 41
+D+ Y+ G+I L+ GGTGF K ++D + FP++G
Sbjct: 86 IDEIYQKGKIPLLVGGTGFYIKSIVDDI--EFPEMG 119
>sp|Q1RIM4|CAPD_RICBR UDP-glucose 4-epimerase OS=Rickettsia bellii (strain RML369-C)
GN=capD PE=3 SV=1
Length = 341
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 11 YRDGQILVTGGTGFMGKLLIDKLLRS--FPDIGAIYIMVRDKK 51
+ D +L+TGGTG G ++ + L++ DI I I RD+K
Sbjct: 2 FVDKTLLITGGTGSFGNAVLSRFLKNDIIKDIKEIRIFSRDEK 44
>sp|Q8L2J6|CAPD_RICTY UDP-glucose 4-epimerase OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=capD PE=3 SV=1
Length = 341
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 11 YRDGQILVTGGTGFMGKLLIDKLLRS--FPDIGAIYIMVRDKK 51
+ D +++TGGTG G ++ + L+S DI I I RD+K
Sbjct: 2 FVDKTLMITGGTGSFGNAVLSRFLKSNIINDIKEIRIFSRDEK 44
>sp|Q9ZDJ5|CAPD_RICPR UDP-glucose 4-epimerase OS=Rickettsia prowazekii (strain Madrid
E) GN=capD PE=1 SV=1
Length = 341
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 11 YRDGQILVTGGTGFMGKLLIDKLLRS--FPDIGAIYIMVRDKK 51
+ D +++TGGTG G ++ + L+S DI I I RD+K
Sbjct: 2 FVDKTLMITGGTGSFGNAVLSRFLKSNIINDIKEIRIFSRDEK 44
>sp|Q4UM33|CAPD_RICFE UDP-glucose 4-epimerase OS=Rickettsia felis (strain ATCC VR-1525
/ URRWXCal2) GN=capD PE=3 SV=1
Length = 341
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 11 YRDGQILVTGGTGFMGKLLIDKLLRS--FPDIGAIYIMVRDKK 51
+ D +++TGGTG G ++ + L+S DI I I RD+K
Sbjct: 2 FVDKTLMITGGTGSFGNAVLSRFLKSDITNDIKEIRIFSRDEK 44
>sp|Q91XL3|UXS1_MOUSE UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2
SV=1
Length = 420
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 16/20 (80%)
Query: 15 QILVTGGTGFMGKLLIDKLL 34
+IL+TGG GF+G L DKL+
Sbjct: 90 RILITGGAGFVGSHLTDKLM 109
>sp|Q6DF08|UXS1_XENTR UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1
PE=2 SV=1
Length = 421
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 16/20 (80%)
Query: 15 QILVTGGTGFMGKLLIDKLL 34
+IL+TGG GF+G L DKL+
Sbjct: 91 RILITGGAGFVGSHLTDKLM 110
>sp|Q5PQX0|UXS1_RAT UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1
PE=1 SV=1
Length = 420
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 16/20 (80%)
Query: 15 QILVTGGTGFMGKLLIDKLL 34
+IL+TGG GF+G L DKL+
Sbjct: 90 RILITGGAGFVGSHLTDKLM 109
>sp|Q5R885|UXS1_PONAB UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2
SV=1
Length = 420
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 16/20 (80%)
Query: 15 QILVTGGTGFMGKLLIDKLL 34
+IL+TGG GF+G L DKL+
Sbjct: 90 RILITGGAGFVGSHLTDKLM 109
>sp|Q8NBZ7|UXS1_HUMAN UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1
SV=1
Length = 420
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 16/20 (80%)
Query: 15 QILVTGGTGFMGKLLIDKLL 34
+IL+TGG GF+G L DKL+
Sbjct: 90 RILITGGAGFVGSHLTDKLM 109
>sp|P10726|RPSD_BACSU RNA polymerase sigma-D factor OS=Bacillus subtilis (strain 168)
GN=sigD PE=1 SV=2
Length = 254
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 16 ILVTGGTGFMGKLL-IDKLLRSFPDIGAIYIMVRDKKGSSPEERV 59
++ T GF LL ID+ L D I +M+RD K PEE++
Sbjct: 142 VVSTMNEGFFANLLSIDEKLHDQDDGENIQVMIRDDKNVPPEEKI 186
>sp|Q54FQ3|PKS29_DICDI Probable polyketide synthase 29 OS=Dictyostelium discoideum GN=pks29
PE=3 SV=1
Length = 3106
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK-KGSSPEERVKNML 63
I +TG TGF+G L+ +L++ +I IY ++R+ K ++P + + N L
Sbjct: 2699 IFLTGSTGFLGAYLLTELIK-MNNISKIYCLIRNNSKLTNPIDVIINNL 2746
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.140 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,238,910
Number of Sequences: 539616
Number of extensions: 942868
Number of successful extensions: 3260
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 3216
Number of HSP's gapped (non-prelim): 72
length of query: 67
length of database: 191,569,459
effective HSP length: 39
effective length of query: 28
effective length of database: 170,524,435
effective search space: 4774684180
effective search space used: 4774684180
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)