Query psy17490
Match_columns 67
No_of_seqs 166 out of 1371
Neff 9.0
Searched_HMMs 46136
Date Fri Aug 16 23:51:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17490.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/17490hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02996 fatty acyl-CoA reduct 99.4 3.3E-12 7.2E-17 83.1 8.0 56 5-60 3-58 (491)
2 PLN02503 fatty acyl-CoA reduct 99.3 4.5E-12 9.7E-17 84.3 7.0 55 6-60 112-166 (605)
3 KOG1221|consensus 99.3 1.1E-11 2.3E-16 80.3 7.3 60 6-65 5-64 (467)
4 KOG1502|consensus 99.2 2.1E-11 4.5E-16 76.1 5.7 46 12-60 5-50 (327)
5 PRK15181 Vi polysaccharide bio 99.0 4.5E-10 9.7E-15 70.0 5.3 37 11-50 13-49 (348)
6 COG3320 Putative dehydrogenase 99.0 5.2E-10 1.1E-14 70.9 5.1 49 14-64 1-49 (382)
7 TIGR02622 CDP_4_6_dhtase CDP-g 99.0 7.3E-10 1.6E-14 68.9 5.3 39 10-51 1-39 (349)
8 PLN02662 cinnamyl-alcohol dehy 99.0 1.1E-09 2.4E-14 67.0 5.8 37 12-51 3-39 (322)
9 PF07993 NAD_binding_4: Male s 99.0 5.5E-10 1.2E-14 67.0 4.3 44 18-62 1-44 (249)
10 PLN02427 UDP-apiose/xylose syn 99.0 1.4E-09 3E-14 68.5 5.1 39 10-50 11-49 (386)
11 CHL00194 ycf39 Ycf39; Provisio 99.0 1.1E-09 2.4E-14 67.5 4.5 35 14-51 1-35 (317)
12 PLN02572 UDP-sulfoquinovose sy 98.9 1.4E-09 3E-14 70.1 4.8 37 9-48 43-79 (442)
13 PRK08125 bifunctional UDP-gluc 98.9 1.9E-09 4.1E-14 72.2 5.2 41 9-51 311-351 (660)
14 PLN02206 UDP-glucuronate decar 98.9 1.8E-09 3.8E-14 69.7 4.9 35 12-49 118-152 (442)
15 PLN00198 anthocyanidin reducta 98.9 2.5E-09 5.5E-14 66.1 5.2 38 11-51 7-44 (338)
16 TIGR01472 gmd GDP-mannose 4,6- 98.9 2.3E-09 4.9E-14 66.5 4.9 35 14-51 1-35 (343)
17 PLN02166 dTDP-glucose 4,6-dehy 98.9 2.3E-09 4.9E-14 69.1 5.0 35 13-50 120-154 (436)
18 PLN02583 cinnamoyl-CoA reducta 98.9 4.5E-09 9.8E-14 64.3 5.8 35 13-50 6-40 (297)
19 PLN02986 cinnamyl-alcohol dehy 98.9 5.8E-09 1.3E-13 64.1 6.0 37 12-51 4-40 (322)
20 PLN02650 dihydroflavonol-4-red 98.9 5E-09 1.1E-13 65.2 5.6 37 12-51 4-40 (351)
21 PLN02695 GDP-D-mannose-3',5'-e 98.9 4.2E-09 9E-14 66.4 5.2 36 12-50 20-55 (370)
22 PRK09987 dTDP-4-dehydrorhamnos 98.9 8.1E-09 1.8E-13 63.3 6.1 33 14-50 1-33 (299)
23 PLN02653 GDP-mannose 4,6-dehyd 98.9 4.6E-09 9.9E-14 65.0 4.9 38 11-51 4-41 (340)
24 COG0451 WcaG Nucleoside-diphos 98.9 5.6E-09 1.2E-13 63.3 5.0 34 15-51 2-35 (314)
25 PLN02214 cinnamoyl-CoA reducta 98.9 6.2E-09 1.3E-13 64.9 5.2 38 11-51 8-45 (342)
26 KOG1429|consensus 98.8 7.2E-09 1.6E-13 64.3 5.1 37 11-50 25-61 (350)
27 TIGR01746 Thioester-redct thio 98.8 6.5E-09 1.4E-13 63.9 4.7 37 15-52 1-37 (367)
28 PLN02896 cinnamyl-alcohol dehy 98.8 7.1E-09 1.5E-13 64.6 4.8 37 11-50 8-44 (353)
29 TIGR01214 rmlD dTDP-4-dehydror 98.8 1.4E-08 3E-13 61.3 5.8 47 15-64 1-47 (287)
30 PLN02989 cinnamyl-alcohol dehy 98.8 1.2E-08 2.7E-13 62.6 5.2 37 12-51 4-40 (325)
31 PRK11908 NAD-dependent epimera 98.8 1.1E-08 2.3E-13 63.6 4.9 35 14-50 2-36 (347)
32 COG1090 Predicted nucleoside-d 98.8 7.1E-09 1.5E-13 63.8 3.9 34 16-52 1-34 (297)
33 TIGR01777 yfcH conserved hypot 98.8 1E-08 2.2E-13 61.7 4.3 34 16-52 1-34 (292)
34 TIGR03589 PseB UDP-N-acetylglu 98.8 1.4E-08 3E-13 63.0 4.8 40 11-51 2-41 (324)
35 PLN02240 UDP-glucose 4-epimera 98.8 1.9E-08 4.1E-13 62.3 5.3 37 11-50 3-39 (352)
36 PF13460 NAD_binding_10: NADH( 98.8 1.8E-08 3.9E-13 57.4 4.6 33 16-51 1-33 (183)
37 PF01370 Epimerase: NAD depend 98.8 2.4E-08 5.3E-13 58.4 5.1 33 16-51 1-33 (236)
38 PLN02686 cinnamoyl-CoA reducta 98.7 2E-08 4.3E-13 63.3 5.0 37 11-50 51-87 (367)
39 PLN02657 3,8-divinyl protochlo 98.7 2.3E-08 4.9E-13 63.6 5.1 38 11-51 58-95 (390)
40 COG0702 Predicted nucleoside-d 98.7 1.9E-08 4.2E-13 60.0 4.1 35 14-51 1-35 (275)
41 PLN02260 probable rhamnose bio 98.7 2.8E-08 6E-13 66.5 5.3 39 10-49 3-41 (668)
42 PRK12823 benD 1,6-dihydroxycyc 98.7 2.3E-08 5E-13 59.6 4.4 38 10-50 5-42 (260)
43 TIGR03649 ergot_EASG ergot alk 98.7 2.3E-08 5E-13 60.6 4.3 34 15-51 1-34 (285)
44 PRK12429 3-hydroxybutyrate deh 98.7 2.7E-08 5.9E-13 58.9 4.5 38 11-51 2-39 (258)
45 PRK06194 hypothetical protein; 98.7 3.1E-08 6.7E-13 59.9 4.8 38 11-51 4-41 (287)
46 PLN02778 3,5-epimerase/4-reduc 98.7 3.6E-08 7.8E-13 60.7 5.1 32 13-47 9-40 (298)
47 COG1087 GalE UDP-glucose 4-epi 98.7 3E-08 6.5E-13 61.8 4.5 33 14-49 1-33 (329)
48 PRK05717 oxidoreductase; Valid 98.7 3.3E-08 7.1E-13 58.9 4.6 39 9-50 6-44 (255)
49 PF04321 RmlD_sub_bind: RmlD s 98.7 4.7E-08 1E-12 59.9 5.3 48 14-64 1-48 (286)
50 PRK07231 fabG 3-ketoacyl-(acyl 98.7 3.9E-08 8.4E-13 58.1 4.8 38 11-51 3-40 (251)
51 PRK12828 short chain dehydroge 98.7 6.2E-08 1.3E-12 56.7 5.6 38 11-51 5-42 (239)
52 PRK09135 pteridine reductase; 98.7 7.7E-08 1.7E-12 56.7 6.0 37 11-50 4-40 (249)
53 PLN00141 Tic62-NAD(P)-related 98.7 3.8E-08 8.2E-13 58.9 4.6 38 11-51 15-52 (251)
54 PRK10675 UDP-galactose-4-epime 98.7 4.6E-08 9.9E-13 60.3 5.1 33 14-49 1-33 (338)
55 PRK07806 short chain dehydroge 98.7 5E-08 1.1E-12 57.7 5.0 37 11-50 4-40 (248)
56 PRK07201 short chain dehydroge 98.7 3.3E-08 7.1E-13 65.6 4.6 36 14-50 1-36 (657)
57 PRK05557 fabG 3-ketoacyl-(acyl 98.7 1.1E-07 2.5E-12 55.8 6.5 38 11-51 3-40 (248)
58 PRK12826 3-ketoacyl-(acyl-carr 98.7 4.5E-08 9.7E-13 57.7 4.7 38 11-51 4-41 (251)
59 PRK12320 hypothetical protein; 98.7 3.9E-08 8.4E-13 66.7 4.9 34 14-50 1-34 (699)
60 TIGR03466 HpnA hopanoid-associ 98.7 4.3E-08 9.4E-13 59.8 4.7 35 14-51 1-35 (328)
61 PRK09186 flagellin modificatio 98.7 8.8E-08 1.9E-12 56.9 5.8 38 11-51 2-39 (256)
62 PRK13394 3-hydroxybutyrate deh 98.7 9.5E-08 2.1E-12 56.8 5.8 38 11-51 5-42 (262)
63 PRK12829 short chain dehydroge 98.7 5.5E-08 1.2E-12 57.9 4.7 40 9-51 7-46 (264)
64 PRK11150 rfaD ADP-L-glycero-D- 98.7 7.4E-08 1.6E-12 58.9 5.3 31 16-49 2-32 (308)
65 PRK07774 short chain dehydroge 98.6 6.2E-08 1.3E-12 57.3 4.7 38 11-51 4-41 (250)
66 PRK05653 fabG 3-ketoacyl-(acyl 98.6 6.7E-08 1.4E-12 56.7 4.8 37 12-51 4-40 (246)
67 PRK07890 short chain dehydroge 98.6 6.2E-08 1.3E-12 57.6 4.7 38 11-51 3-40 (258)
68 PRK06057 short chain dehydroge 98.6 7E-08 1.5E-12 57.5 4.7 38 11-51 5-42 (255)
69 PRK07523 gluconate 5-dehydroge 98.6 7.9E-08 1.7E-12 57.2 4.8 38 11-51 8-45 (255)
70 PRK06179 short chain dehydroge 98.6 8.8E-08 1.9E-12 57.4 5.0 37 12-51 3-39 (270)
71 PRK06180 short chain dehydroge 98.6 7.1E-08 1.5E-12 58.3 4.6 37 12-51 3-39 (277)
72 TIGR01832 kduD 2-deoxy-D-gluco 98.6 8.4E-08 1.8E-12 56.8 4.8 37 11-50 3-39 (248)
73 TIGR03206 benzo_BadH 2-hydroxy 98.6 9.7E-08 2.1E-12 56.4 4.9 38 11-51 1-38 (250)
74 PLN00016 RNA-binding protein; 98.6 5.9E-08 1.3E-12 61.2 4.2 36 13-51 52-91 (378)
75 COG0300 DltE Short-chain dehyd 98.6 1.7E-07 3.6E-12 57.5 6.0 39 10-51 3-41 (265)
76 PRK06914 short chain dehydroge 98.6 8.7E-08 1.9E-12 57.7 4.7 37 12-51 2-38 (280)
77 PRK08628 short chain dehydroge 98.6 1E-07 2.2E-12 56.7 4.9 38 11-51 5-42 (258)
78 PRK06523 short chain dehydroge 98.6 9.8E-08 2.1E-12 56.9 4.7 38 10-50 6-43 (260)
79 PRK08945 putative oxoacyl-(acy 98.6 1.2E-07 2.6E-12 56.2 4.9 41 8-51 7-47 (247)
80 PRK12825 fabG 3-ketoacyl-(acyl 98.6 2.1E-07 4.6E-12 54.6 5.9 37 11-50 4-40 (249)
81 PRK07576 short chain dehydroge 98.6 1.4E-07 3.1E-12 56.7 5.2 38 11-51 7-44 (264)
82 PRK06138 short chain dehydroge 98.6 9.3E-08 2E-12 56.6 4.3 38 11-51 3-40 (252)
83 PRK07814 short chain dehydroge 98.6 1.2E-07 2.6E-12 56.9 4.8 38 11-51 8-45 (263)
84 PRK12367 short chain dehydroge 98.6 1.6E-07 3.5E-12 56.4 5.4 39 9-50 10-48 (245)
85 PF01073 3Beta_HSD: 3-beta hyd 98.6 5.9E-08 1.3E-12 59.5 3.5 34 17-51 1-34 (280)
86 TIGR03325 BphB_TodD cis-2,3-di 98.6 1.2E-07 2.6E-12 56.8 4.6 37 11-50 3-39 (262)
87 PRK06196 oxidoreductase; Provi 98.6 1.5E-07 3.3E-12 57.9 5.1 38 11-51 24-61 (315)
88 PRK06398 aldose dehydrogenase; 98.6 1.8E-07 3.9E-12 56.1 5.3 38 11-51 4-41 (258)
89 PRK12827 short chain dehydroge 98.6 3.1E-07 6.7E-12 54.1 6.2 36 11-49 4-39 (249)
90 PRK08703 short chain dehydroge 98.6 1.5E-07 3.3E-12 55.5 4.8 38 11-51 4-41 (239)
91 PRK08213 gluconate 5-dehydroge 98.6 1.9E-07 4E-12 55.8 5.1 38 11-51 10-47 (259)
92 PRK08264 short chain dehydroge 98.6 1.6E-07 3.4E-12 55.3 4.8 38 11-51 4-42 (238)
93 PRK07856 short chain dehydroge 98.6 1.6E-07 3.5E-12 55.9 4.8 37 11-50 4-40 (252)
94 PRK05875 short chain dehydroge 98.6 1.6E-07 3.5E-12 56.4 4.8 38 11-51 5-42 (276)
95 PRK07067 sorbitol dehydrogenas 98.6 1.4E-07 3.1E-12 56.2 4.5 38 11-51 4-41 (257)
96 PRK07577 short chain dehydroge 98.6 2.2E-07 4.7E-12 54.5 5.2 37 12-51 2-38 (234)
97 PRK06124 gluconate 5-dehydroge 98.5 2.1E-07 4.5E-12 55.4 5.2 38 11-51 9-46 (256)
98 PRK06197 short chain dehydroge 98.5 1.6E-07 3.6E-12 57.5 4.8 38 11-51 14-51 (306)
99 PRK07063 short chain dehydroge 98.5 2.3E-07 5.1E-12 55.3 5.3 38 11-51 5-42 (260)
100 PRK10217 dTDP-glucose 4,6-dehy 98.5 2.1E-07 4.5E-12 57.8 5.3 32 14-48 2-34 (355)
101 PRK07326 short chain dehydroge 98.5 1.7E-07 3.6E-12 55.1 4.6 38 11-51 4-41 (237)
102 TIGR01963 PHB_DH 3-hydroxybuty 98.5 1.5E-07 3.2E-12 55.7 4.4 36 13-51 1-36 (255)
103 PRK07666 fabG 3-ketoacyl-(acyl 98.5 1.9E-07 4E-12 55.1 4.7 38 11-51 5-42 (239)
104 PRK08278 short chain dehydroge 98.5 2.3E-07 5E-12 56.1 5.2 38 11-51 4-41 (273)
105 PRK06841 short chain dehydroge 98.5 1.9E-07 4.1E-12 55.5 4.7 38 11-51 13-50 (255)
106 PRK06182 short chain dehydroge 98.5 2E-07 4.3E-12 56.1 4.8 37 12-51 2-38 (273)
107 PLN03209 translocon at the inn 98.5 2E-07 4.2E-12 62.2 5.1 39 10-51 77-115 (576)
108 PRK07102 short chain dehydroge 98.5 1.9E-07 4.1E-12 55.3 4.6 35 14-51 2-36 (243)
109 PRK06482 short chain dehydroge 98.5 2.2E-07 4.9E-12 55.9 5.0 34 14-50 3-36 (276)
110 PRK05786 fabG 3-ketoacyl-(acyl 98.5 2.1E-07 4.6E-12 54.7 4.8 38 11-51 3-40 (238)
111 PRK06500 short chain dehydroge 98.5 2.1E-07 4.6E-12 54.9 4.8 37 11-50 4-40 (249)
112 COG1088 RfbB dTDP-D-glucose 4, 98.5 1.8E-07 3.9E-12 58.4 4.6 34 14-48 1-34 (340)
113 PRK08226 short chain dehydroge 98.5 1.6E-07 3.5E-12 56.0 4.3 37 11-50 4-40 (263)
114 COG1086 Predicted nucleoside-d 98.5 1.9E-07 4.1E-12 62.0 4.9 45 6-52 243-287 (588)
115 PRK06949 short chain dehydroge 98.5 2.6E-07 5.6E-12 54.9 5.1 38 11-51 7-44 (258)
116 PRK09072 short chain dehydroge 98.5 2.5E-07 5.5E-12 55.3 5.1 38 11-51 3-40 (263)
117 PRK12939 short chain dehydroge 98.5 2E-07 4.3E-12 55.0 4.5 38 11-51 5-42 (250)
118 PRK06172 short chain dehydroge 98.5 1.9E-07 4.1E-12 55.5 4.4 38 11-51 5-42 (253)
119 PRK05854 short chain dehydroge 98.5 2.9E-07 6.2E-12 56.9 5.3 38 11-51 12-49 (313)
120 PRK05866 short chain dehydroge 98.5 2.7E-07 5.9E-12 56.5 5.2 38 11-51 38-75 (293)
121 PRK07023 short chain dehydroge 98.5 2.4E-07 5.2E-12 54.8 4.8 35 14-51 2-36 (243)
122 PRK08263 short chain dehydroge 98.5 2.6E-07 5.5E-12 55.8 4.9 36 13-51 3-38 (275)
123 PRK07825 short chain dehydroge 98.5 2.3E-07 5E-12 55.8 4.7 38 11-51 3-40 (273)
124 PRK06935 2-deoxy-D-gluconate 3 98.5 2.5E-07 5.5E-12 55.2 4.8 36 11-49 13-48 (258)
125 PRK07035 short chain dehydroge 98.5 3.1E-07 6.7E-12 54.5 5.1 38 11-51 6-43 (252)
126 PRK06114 short chain dehydroge 98.5 6.9E-07 1.5E-11 53.3 6.5 38 11-51 6-43 (254)
127 PRK08265 short chain dehydroge 98.5 2.6E-07 5.7E-12 55.4 4.7 38 11-51 4-41 (261)
128 PRK06128 oxidoreductase; Provi 98.5 4.1E-07 9E-12 55.7 5.7 37 11-50 53-89 (300)
129 PRK06200 2,3-dihydroxy-2,3-dih 98.5 2.9E-07 6.3E-12 55.1 4.9 37 11-50 4-40 (263)
130 PRK06171 sorbitol-6-phosphate 98.5 4.1E-07 8.8E-12 54.5 5.5 38 11-51 7-44 (266)
131 PRK10538 malonic semialdehyde 98.5 2.7E-07 5.8E-12 54.9 4.7 35 14-51 1-35 (248)
132 PLN02253 xanthoxin dehydrogena 98.5 3.3E-07 7.2E-12 55.3 5.1 38 10-50 15-52 (280)
133 PRK09291 short chain dehydroge 98.5 3.3E-07 7.1E-12 54.4 5.0 35 13-50 2-36 (257)
134 PRK12745 3-ketoacyl-(acyl-carr 98.5 3.4E-07 7.3E-12 54.4 5.0 34 14-50 3-36 (256)
135 PRK06701 short chain dehydroge 98.5 7.2E-07 1.6E-11 54.5 6.5 39 10-51 43-81 (290)
136 PRK05867 short chain dehydroge 98.5 2.5E-07 5.5E-12 55.1 4.4 38 11-51 7-44 (253)
137 PRK07478 short chain dehydroge 98.5 2.7E-07 5.8E-12 54.9 4.5 38 11-51 4-41 (254)
138 PRK07453 protochlorophyllide o 98.5 3.5E-07 7.6E-12 56.4 5.1 38 11-51 4-41 (322)
139 PRK05993 short chain dehydroge 98.5 2.8E-07 6.1E-12 55.8 4.6 36 13-51 4-39 (277)
140 PRK07062 short chain dehydroge 98.5 3.1E-07 6.6E-12 55.0 4.7 38 11-51 6-43 (265)
141 PRK07060 short chain dehydroge 98.5 4.2E-07 9.1E-12 53.6 5.2 37 11-50 7-43 (245)
142 PRK06101 short chain dehydroge 98.5 3.7E-07 8.1E-12 54.1 4.9 34 14-50 2-35 (240)
143 PRK08589 short chain dehydroge 98.5 4.1E-07 8.9E-12 54.9 5.1 36 11-49 4-39 (272)
144 PRK08085 gluconate 5-dehydroge 98.5 3.1E-07 6.8E-12 54.6 4.5 38 11-51 7-44 (254)
145 PRK08220 2,3-dihydroxybenzoate 98.5 4E-07 8.6E-12 53.9 4.9 37 11-50 6-42 (252)
146 PRK05876 short chain dehydroge 98.5 4.1E-07 8.8E-12 55.2 5.0 38 11-51 4-41 (275)
147 PRK08177 short chain dehydroge 98.5 5.1E-07 1.1E-11 53.0 5.3 36 14-52 2-37 (225)
148 PRK07904 short chain dehydroge 98.5 4.9E-07 1.1E-11 54.2 5.2 38 12-51 7-44 (253)
149 PRK06550 fabG 3-ketoacyl-(acyl 98.5 4.6E-07 1E-11 53.2 5.0 38 11-51 3-40 (235)
150 PRK08267 short chain dehydroge 98.5 3.4E-07 7.4E-12 54.6 4.4 35 14-51 2-36 (260)
151 PRK06077 fabG 3-ketoacyl-(acyl 98.5 4.8E-07 1E-11 53.5 5.0 36 11-49 4-39 (252)
152 PRK07454 short chain dehydroge 98.5 3.9E-07 8.4E-12 53.8 4.6 37 12-51 5-41 (241)
153 KOG1371|consensus 98.5 4.3E-07 9.4E-12 57.0 4.9 49 13-64 2-51 (343)
154 PRK08642 fabG 3-ketoacyl-(acyl 98.4 4.8E-07 1E-11 53.6 4.9 36 11-49 3-38 (253)
155 PRK08251 short chain dehydroge 98.4 4.6E-07 1E-11 53.6 4.8 36 13-51 2-37 (248)
156 PRK05565 fabG 3-ketoacyl-(acyl 98.4 3.7E-07 8.1E-12 53.7 4.3 38 11-51 3-41 (247)
157 PRK10084 dTDP-glucose 4,6 dehy 98.4 3.1E-07 6.8E-12 57.0 4.1 33 14-48 1-33 (352)
158 PRK05693 short chain dehydroge 98.4 4.4E-07 9.5E-12 54.7 4.6 34 14-50 2-35 (274)
159 PRK06924 short chain dehydroge 98.4 5.2E-07 1.1E-11 53.5 4.9 34 14-50 2-35 (251)
160 PRK07985 oxidoreductase; Provi 98.4 8.9E-07 1.9E-11 54.3 6.0 37 11-50 47-83 (294)
161 TIGR02197 heptose_epim ADP-L-g 98.4 3.1E-07 6.7E-12 55.9 3.9 32 16-50 1-33 (314)
162 PRK07074 short chain dehydroge 98.4 4.8E-07 1E-11 53.9 4.6 36 13-51 2-37 (257)
163 PRK08643 acetoin reductase; Va 98.4 4.6E-07 1E-11 53.9 4.5 36 13-51 2-37 (256)
164 PRK07024 short chain dehydroge 98.4 6.1E-07 1.3E-11 53.6 5.0 35 13-50 2-36 (257)
165 PRK06463 fabG 3-ketoacyl-(acyl 98.4 5.4E-07 1.2E-11 53.7 4.8 36 11-49 5-40 (255)
166 PRK12746 short chain dehydroge 98.4 6.1E-07 1.3E-11 53.3 5.0 36 11-49 4-40 (254)
167 PRK12936 3-ketoacyl-(acyl-carr 98.4 5.2E-07 1.1E-11 53.1 4.5 37 11-50 4-40 (245)
168 PRK12384 sorbitol-6-phosphate 98.4 5.6E-07 1.2E-11 53.6 4.7 36 13-51 2-37 (259)
169 PRK08339 short chain dehydroge 98.4 6.5E-07 1.4E-11 53.9 5.0 38 11-51 6-43 (263)
170 PRK07424 bifunctional sterol d 98.4 5.1E-07 1.1E-11 58.1 4.7 38 11-51 176-213 (406)
171 COG2910 Putative NADH-flavin r 98.4 4.8E-07 1.1E-11 53.2 4.2 38 14-54 1-38 (211)
172 PRK12747 short chain dehydroge 98.4 6.7E-07 1.5E-11 53.2 4.9 35 11-48 2-36 (252)
173 PRK08277 D-mannonate oxidoredu 98.4 6.8E-07 1.5E-11 53.9 4.9 37 11-50 8-44 (278)
174 PRK08017 oxidoreductase; Provi 98.4 6.1E-07 1.3E-11 53.3 4.6 35 14-51 3-37 (256)
175 PRK12742 oxidoreductase; Provi 98.4 7.4E-07 1.6E-11 52.4 5.0 36 11-49 4-39 (237)
176 PRK07775 short chain dehydroge 98.4 7.7E-07 1.7E-11 53.8 5.1 37 11-50 8-44 (274)
177 TIGR01181 dTDP_gluc_dehyt dTDP 98.4 4.4E-07 9.5E-12 55.0 4.1 34 15-49 1-34 (317)
178 PRK12937 short chain dehydroge 98.4 6.7E-07 1.5E-11 52.7 4.7 36 11-49 3-38 (245)
179 PRK06181 short chain dehydroge 98.4 6.5E-07 1.4E-11 53.5 4.7 36 13-51 1-36 (263)
180 PRK06483 dihydromonapterin red 98.4 8.5E-07 1.9E-11 52.3 5.0 36 13-51 2-37 (236)
181 PRK06113 7-alpha-hydroxysteroi 98.4 7.5E-07 1.6E-11 53.1 4.7 37 11-50 9-45 (255)
182 PRK08416 7-alpha-hydroxysteroi 98.4 8.7E-07 1.9E-11 53.1 4.9 36 11-49 6-41 (260)
183 PRK12481 2-deoxy-D-gluconate 3 98.4 8E-07 1.7E-11 53.1 4.6 37 11-50 6-42 (251)
184 PRK12935 acetoacetyl-CoA reduc 98.4 1.7E-06 3.7E-11 51.1 6.0 36 11-49 4-39 (247)
185 PRK05865 hypothetical protein; 98.4 7.4E-07 1.6E-11 61.7 5.0 34 14-50 1-34 (854)
186 PRK06198 short chain dehydroge 98.4 6.5E-07 1.4E-11 53.3 4.0 38 11-51 4-42 (260)
187 PRK12744 short chain dehydroge 98.4 1.7E-06 3.6E-11 51.6 5.7 36 11-49 6-41 (257)
188 PRK09242 tropinone reductase; 98.4 1.2E-06 2.7E-11 52.2 5.1 38 11-51 7-44 (257)
189 PRK08936 glucose-1-dehydrogena 98.4 2.1E-06 4.5E-11 51.3 6.0 37 11-50 5-41 (261)
190 PRK08063 enoyl-(acyl carrier p 98.3 8.8E-07 1.9E-11 52.4 4.4 36 11-49 2-38 (250)
191 PRK08219 short chain dehydroge 98.3 1.2E-06 2.5E-11 51.1 4.8 35 13-51 3-37 (227)
192 PRK07792 fabG 3-ketoacyl-(acyl 98.3 2.5E-06 5.5E-11 52.5 6.4 38 9-49 8-45 (306)
193 PRK05872 short chain dehydroge 98.3 1.3E-06 2.9E-11 53.4 5.2 38 11-51 7-44 (296)
194 PRK09134 short chain dehydroge 98.3 1.4E-06 3E-11 52.1 5.1 36 11-49 7-42 (258)
195 PRK07109 short chain dehydroge 98.3 1.3E-06 2.8E-11 54.5 5.2 38 11-51 6-43 (334)
196 PRK08217 fabG 3-ketoacyl-(acyl 98.3 1.2E-06 2.7E-11 51.6 4.9 37 11-50 3-39 (253)
197 PLN02780 ketoreductase/ oxidor 98.3 6.9E-07 1.5E-11 55.6 3.9 37 12-51 52-88 (320)
198 PF02719 Polysacc_synt_2: Poly 98.3 8.8E-07 1.9E-11 55.0 4.3 34 16-51 1-34 (293)
199 PRK05650 short chain dehydroge 98.3 1.6E-06 3.5E-11 52.1 5.3 35 14-51 1-35 (270)
200 PRK07097 gluconate 5-dehydroge 98.3 1.2E-06 2.6E-11 52.6 4.7 38 11-51 8-45 (265)
201 KOG1430|consensus 98.3 1.3E-06 2.8E-11 55.6 4.9 39 12-51 3-41 (361)
202 PRK06139 short chain dehydroge 98.3 1.3E-06 2.9E-11 54.6 4.9 38 11-51 5-42 (330)
203 TIGR03443 alpha_am_amid L-amin 98.3 1.3E-06 2.9E-11 62.0 5.4 47 13-59 971-1018(1389)
204 PRK07677 short chain dehydroge 98.3 1.6E-06 3.4E-11 51.6 4.9 36 13-51 1-36 (252)
205 TIGR01179 galE UDP-glucose-4-e 98.3 1.3E-06 2.8E-11 53.1 4.6 32 15-49 1-32 (328)
206 PRK12743 oxidoreductase; Provi 98.3 3E-06 6.6E-11 50.6 6.1 34 13-49 2-35 (256)
207 PLN02725 GDP-4-keto-6-deoxyman 98.3 1.1E-06 2.4E-11 53.4 4.1 45 17-64 1-46 (306)
208 PRK12938 acetyacetyl-CoA reduc 98.3 1.8E-06 4E-11 51.0 4.9 34 12-48 2-35 (246)
209 PRK06953 short chain dehydroge 98.3 1.4E-06 3.1E-11 51.0 4.2 35 14-51 2-36 (222)
210 PRK08340 glucose-1-dehydrogena 98.3 1.9E-06 4.1E-11 51.5 4.5 35 14-51 1-35 (259)
211 KOG1205|consensus 98.2 3E-06 6.5E-11 52.5 5.1 41 8-51 7-47 (282)
212 PRK08303 short chain dehydroge 98.2 2.8E-06 6E-11 52.5 4.9 37 11-50 6-42 (305)
213 PRK05884 short chain dehydroge 98.2 2.7E-06 5.9E-11 50.2 4.7 34 14-50 1-34 (223)
214 PRK07832 short chain dehydroge 98.2 2.4E-06 5.3E-11 51.4 4.6 34 14-50 1-34 (272)
215 PLN02260 probable rhamnose bio 98.2 3.1E-06 6.6E-11 56.9 5.4 28 13-43 380-407 (668)
216 PRK06125 short chain dehydroge 98.2 2.9E-06 6.3E-11 50.7 4.8 38 11-51 5-42 (259)
217 PRK12824 acetoacetyl-CoA reduc 98.2 3.2E-06 6.9E-11 49.7 4.9 34 14-50 3-36 (245)
218 PRK07791 short chain dehydroge 98.2 3.3E-06 7.1E-11 51.5 5.1 37 11-50 4-40 (286)
219 PRK08993 2-deoxy-D-gluconate 3 98.2 3.1E-06 6.8E-11 50.5 4.9 36 11-49 8-43 (253)
220 COG4221 Short-chain alcohol de 98.2 6.4E-06 1.4E-10 50.1 6.1 38 11-51 4-41 (246)
221 TIGR02632 RhaD_aldol-ADH rhamn 98.2 2.8E-06 6.1E-11 57.5 5.1 38 11-51 412-449 (676)
222 PRK07201 short chain dehydroge 98.2 3.1E-06 6.7E-11 56.3 5.2 38 11-51 369-406 (657)
223 TIGR01829 AcAcCoA_reduct aceto 98.2 3.2E-06 7E-11 49.6 4.7 33 14-49 1-33 (242)
224 PRK07069 short chain dehydroge 98.2 5.9E-06 1.3E-10 48.8 5.7 32 15-49 1-32 (251)
225 PF05368 NmrA: NmrA-like famil 98.2 3.5E-06 7.7E-11 49.8 4.8 32 16-50 1-32 (233)
226 PRK06079 enoyl-(acyl carrier p 98.2 3.2E-06 6.9E-11 50.6 4.6 36 11-49 5-42 (252)
227 PRK09620 hypothetical protein; 98.2 4.1E-06 8.9E-11 50.4 5.0 36 11-49 1-52 (229)
228 PF00106 adh_short: short chai 98.2 1E-05 2.3E-10 45.2 6.3 34 14-49 1-34 (167)
229 PRK08594 enoyl-(acyl carrier p 98.2 6.5E-06 1.4E-10 49.5 5.8 37 11-50 5-43 (257)
230 KOG1431|consensus 98.2 8.5E-06 1.8E-10 49.8 6.2 53 14-66 2-54 (315)
231 PRK06947 glucose-1-dehydrogena 98.2 7.2E-06 1.6E-10 48.5 5.8 32 14-48 3-34 (248)
232 TIGR02415 23BDH acetoin reduct 98.2 4.3E-06 9.4E-11 49.5 4.8 34 14-50 1-34 (254)
233 PRK07533 enoyl-(acyl carrier p 98.2 5.2E-06 1.1E-10 49.8 5.2 37 11-50 8-46 (258)
234 PRK05855 short chain dehydroge 98.2 4.5E-06 9.7E-11 54.3 5.2 38 11-51 313-350 (582)
235 PRK09730 putative NAD(P)-bindi 98.2 8E-06 1.7E-10 48.1 5.8 31 14-47 2-32 (247)
236 PRK06123 short chain dehydroge 98.2 5.1E-06 1.1E-10 49.1 4.8 34 13-49 2-35 (248)
237 PRK07831 short chain dehydroge 98.2 4.4E-06 9.5E-11 50.0 4.5 39 10-51 14-53 (262)
238 TIGR01830 3oxo_ACP_reduc 3-oxo 98.1 4E-06 8.7E-11 49.1 4.1 32 16-50 1-32 (239)
239 TIGR02685 pter_reduc_Leis pter 98.1 8.3E-06 1.8E-10 49.0 5.4 33 14-49 2-34 (267)
240 PRK06720 hypothetical protein; 98.1 8.1E-06 1.8E-10 46.9 5.1 38 11-51 14-51 (169)
241 PRK08862 short chain dehydroge 98.1 8.6E-06 1.9E-10 48.4 5.4 38 11-51 3-40 (227)
242 smart00822 PKS_KR This enzymat 98.1 1.9E-05 4.1E-10 43.8 6.5 36 14-51 1-36 (180)
243 PRK08324 short chain dehydroge 98.1 5.3E-06 1.1E-10 56.1 4.9 38 11-51 420-457 (681)
244 PRK07370 enoyl-(acyl carrier p 98.1 1.5E-05 3.2E-10 48.0 6.4 37 11-50 4-42 (258)
245 PRK14982 acyl-ACP reductase; P 98.1 6.8E-06 1.5E-10 52.0 5.0 41 10-51 152-192 (340)
246 PRK06505 enoyl-(acyl carrier p 98.1 5.5E-06 1.2E-10 50.3 4.3 37 11-50 5-43 (271)
247 PRK12748 3-ketoacyl-(acyl-carr 98.1 6.6E-06 1.4E-10 49.1 4.5 36 11-49 3-40 (256)
248 PRK08261 fabG 3-ketoacyl-(acyl 98.1 8E-06 1.7E-10 52.5 5.1 38 10-50 207-244 (450)
249 PRK07578 short chain dehydroge 98.1 2.1E-05 4.7E-10 45.3 6.2 33 14-50 1-33 (199)
250 PF01118 Semialdhyde_dh: Semia 98.1 1.6E-05 3.4E-10 43.3 5.3 35 15-50 1-35 (121)
251 PRK06484 short chain dehydroge 98.1 9.2E-06 2E-10 52.9 5.1 38 10-50 266-303 (520)
252 PRK09009 C factor cell-cell si 98.1 1.3E-05 2.8E-10 47.1 5.3 35 14-49 1-35 (235)
253 TIGR01289 LPOR light-dependent 98.1 1.1E-05 2.4E-10 49.9 5.2 36 13-51 3-39 (314)
254 TIGR01831 fabG_rel 3-oxoacyl-( 98.1 1.2E-05 2.6E-10 47.3 4.9 32 16-50 1-32 (239)
255 PRK08690 enoyl-(acyl carrier p 98.0 8.2E-06 1.8E-10 49.1 4.2 36 11-49 4-41 (261)
256 PRK08309 short chain dehydroge 98.0 1.2E-05 2.5E-10 46.7 4.5 33 14-50 1-33 (177)
257 PRK07984 enoyl-(acyl carrier p 98.0 1.2E-05 2.5E-10 48.7 4.7 36 11-49 4-41 (262)
258 COG1091 RfbD dTDP-4-dehydrorha 98.0 1.3E-05 2.9E-10 49.6 5.0 47 14-64 1-47 (281)
259 PRK08415 enoyl-(acyl carrier p 98.0 1E-05 2.2E-10 49.3 4.4 37 11-50 3-41 (274)
260 PRK06484 short chain dehydroge 98.0 1E-05 2.2E-10 52.7 4.6 38 11-51 3-40 (520)
261 PRK07889 enoyl-(acyl carrier p 98.0 1.8E-05 3.9E-10 47.5 5.3 37 11-50 5-43 (256)
262 PRK06603 enoyl-(acyl carrier p 98.0 1.1E-05 2.3E-10 48.6 4.3 36 11-49 6-43 (260)
263 PRK08159 enoyl-(acyl carrier p 98.0 1.1E-05 2.4E-10 49.0 4.3 38 9-49 6-45 (272)
264 COG1028 FabG Dehydrogenases wi 98.0 2.2E-05 4.8E-10 46.5 5.1 38 11-51 3-40 (251)
265 PRK12859 3-ketoacyl-(acyl-carr 98.0 2.1E-05 4.5E-10 47.1 4.7 35 11-48 4-40 (256)
266 PRK07041 short chain dehydroge 97.9 1.4E-05 3.1E-10 46.8 3.7 31 17-50 1-31 (230)
267 PRK05599 hypothetical protein; 97.9 3.3E-05 7.1E-10 46.1 5.0 34 14-51 1-34 (246)
268 cd01078 NAD_bind_H4MPT_DH NADP 97.9 3.6E-05 7.7E-10 44.8 5.0 38 11-51 26-63 (194)
269 PRK06997 enoyl-(acyl carrier p 97.9 2.8E-05 6E-10 46.9 4.6 36 11-49 4-41 (260)
270 KOG1201|consensus 97.9 7.9E-05 1.7E-09 46.5 6.5 39 10-51 35-73 (300)
271 KOG0725|consensus 97.9 3.1E-05 6.7E-10 47.6 4.5 39 10-51 5-43 (270)
272 PF08659 KR: KR domain; Inter 97.8 0.00012 2.6E-09 42.2 6.5 45 15-61 2-47 (181)
273 KOG4169|consensus 97.8 2.8E-05 6.1E-10 47.3 3.4 51 11-64 3-53 (261)
274 TIGR01500 sepiapter_red sepiap 97.8 3.9E-05 8.4E-10 45.9 4.1 37 15-51 2-39 (256)
275 KOG1208|consensus 97.8 6.8E-05 1.5E-09 47.1 5.1 38 11-51 33-70 (314)
276 COG3967 DltE Short-chain dehyd 97.8 6E-05 1.3E-09 45.3 4.6 38 11-51 3-40 (245)
277 PLN02730 enoyl-[acyl-carrier-p 97.8 8E-05 1.7E-09 46.4 5.3 36 10-49 6-43 (303)
278 PRK05579 bifunctional phosphop 97.7 6.9E-05 1.5E-09 48.4 4.7 38 10-50 185-238 (399)
279 PRK06940 short chain dehydroge 97.7 8.9E-05 1.9E-09 45.0 4.8 34 13-51 2-35 (275)
280 KOG1014|consensus 97.6 0.00013 2.8E-09 45.8 4.5 36 14-52 50-85 (312)
281 cd01336 MDH_cytoplasmic_cytoso 97.6 0.00018 3.9E-09 45.3 5.2 38 14-51 3-44 (325)
282 PRK06732 phosphopantothenate-- 97.6 0.00017 3.7E-09 43.4 4.6 27 20-49 23-49 (229)
283 KOG4039|consensus 97.6 0.00016 3.4E-09 42.9 4.2 39 11-50 16-54 (238)
284 PRK14874 aspartate-semialdehyd 97.6 0.0003 6.5E-09 44.3 5.8 37 14-50 2-38 (334)
285 KOG1203|consensus 97.6 0.00011 2.4E-09 47.7 3.8 38 11-51 77-114 (411)
286 KOG0747|consensus 97.6 0.00011 2.5E-09 45.9 3.5 35 13-48 6-40 (331)
287 PRK05086 malate dehydrogenase; 97.5 0.00038 8.2E-09 43.6 5.4 38 14-51 1-38 (312)
288 TIGR01915 npdG NADPH-dependent 97.5 0.0003 6.4E-09 41.8 4.5 35 14-51 1-35 (219)
289 COG1089 Gmd GDP-D-mannose dehy 97.5 0.0003 6.4E-09 44.2 4.5 36 13-51 2-37 (345)
290 PLN00015 protochlorophyllide r 97.4 0.00021 4.6E-09 44.0 3.7 31 17-50 1-32 (308)
291 TIGR00715 precor6x_red precorr 97.4 0.00035 7.5E-09 42.8 4.4 34 14-51 1-34 (256)
292 PF00056 Ldh_1_N: lactate/mala 97.4 0.00083 1.8E-08 37.6 5.5 37 14-51 1-37 (141)
293 PLN02968 Probable N-acetyl-gam 97.4 0.00043 9.2E-09 44.5 4.7 37 12-50 37-73 (381)
294 KOG1611|consensus 97.4 0.00049 1.1E-08 41.9 4.6 38 13-51 3-40 (249)
295 KOG1207|consensus 97.3 0.00036 7.9E-09 41.3 3.7 41 8-51 2-42 (245)
296 PF01488 Shikimate_DH: Shikima 97.3 0.0013 2.9E-08 36.4 5.6 39 10-51 9-47 (135)
297 PRK06300 enoyl-(acyl carrier p 97.3 0.00075 1.6E-08 42.0 4.9 35 11-48 6-42 (299)
298 PRK12548 shikimate 5-dehydroge 97.3 0.0011 2.3E-08 41.1 5.4 37 11-50 124-160 (289)
299 PRK05671 aspartate-semialdehyd 97.3 0.001 2.2E-08 42.2 5.4 35 14-48 5-39 (336)
300 PRK08664 aspartate-semialdehyd 97.2 0.001 2.2E-08 42.2 5.0 34 14-49 4-37 (349)
301 KOG1372|consensus 97.2 0.0011 2.3E-08 41.3 4.9 49 14-66 29-77 (376)
302 KOG2865|consensus 97.2 0.00079 1.7E-08 42.6 4.2 37 12-51 60-96 (391)
303 PRK00436 argC N-acetyl-gamma-g 97.1 0.002 4.4E-08 40.8 5.5 33 14-48 3-35 (343)
304 COG1748 LYS9 Saccharopine dehy 97.1 0.0011 2.4E-08 42.9 4.0 35 14-51 2-36 (389)
305 cd05294 LDH-like_MDH_nadp A la 97.0 0.0023 5E-08 40.0 5.2 36 14-50 1-36 (309)
306 PTZ00325 malate dehydrogenase; 97.0 0.0021 4.4E-08 40.6 5.0 39 10-49 5-43 (321)
307 TIGR01850 argC N-acetyl-gamma- 97.0 0.0025 5.5E-08 40.4 5.3 33 14-48 1-34 (346)
308 PRK08040 putative semialdehyde 97.0 0.003 6.5E-08 40.2 5.5 37 12-49 3-40 (336)
309 PRK08655 prephenate dehydrogen 96.9 0.002 4.2E-08 42.1 4.5 35 14-51 1-35 (437)
310 PRK00258 aroE shikimate 5-dehy 96.9 0.003 6.5E-08 38.8 5.0 38 11-51 121-158 (278)
311 PLN00106 malate dehydrogenase 96.9 0.004 8.6E-08 39.4 5.5 37 13-50 18-54 (323)
312 KOG1200|consensus 96.9 0.004 8.7E-08 37.6 5.1 41 8-51 9-49 (256)
313 TIGR00521 coaBC_dfp phosphopan 96.9 0.0028 6E-08 41.0 4.8 37 11-50 183-235 (390)
314 TIGR01296 asd_B aspartate-semi 96.8 0.0033 7.2E-08 39.9 4.9 35 15-49 1-35 (339)
315 cd01075 NAD_bind_Leu_Phe_Val_D 96.8 0.004 8.6E-08 36.7 4.9 37 10-50 25-61 (200)
316 PLN02383 aspartate semialdehyd 96.8 0.006 1.3E-07 38.9 5.9 35 13-47 7-41 (344)
317 cd01080 NAD_bind_m-THF_DH_Cycl 96.8 0.0045 9.8E-08 35.8 4.8 37 11-50 42-78 (168)
318 TIGR02813 omega_3_PfaA polyket 96.8 0.0034 7.4E-08 48.3 5.2 37 11-49 1995-2031(2582)
319 PRK06849 hypothetical protein; 96.8 0.0046 9.9E-08 39.4 5.1 37 12-51 3-39 (389)
320 KOG1478|consensus 96.8 0.0069 1.5E-07 37.9 5.7 24 14-37 4-27 (341)
321 PRK14106 murD UDP-N-acetylmura 96.8 0.0037 7.9E-08 40.4 4.7 36 11-50 3-38 (450)
322 PRK11199 tyrA bifunctional cho 96.7 0.0035 7.7E-08 40.1 4.5 35 13-50 98-132 (374)
323 TIGR00978 asd_EA aspartate-sem 96.7 0.0046 1E-07 39.1 4.8 31 14-46 1-31 (341)
324 PF01113 DapB_N: Dihydrodipico 96.7 0.007 1.5E-07 33.1 5.0 36 14-50 1-36 (124)
325 PRK06718 precorrin-2 dehydroge 96.7 0.0059 1.3E-07 36.1 4.8 35 11-49 8-42 (202)
326 cd01065 NAD_bind_Shikimate_DH 96.6 0.0063 1.4E-07 33.8 4.6 38 11-51 17-54 (155)
327 PRK06129 3-hydroxyacyl-CoA deh 96.6 0.0051 1.1E-07 38.2 4.3 34 14-51 3-36 (308)
328 cd00704 MDH Malate dehydrogena 96.5 0.0098 2.1E-07 37.6 5.4 35 15-50 2-41 (323)
329 PRK13656 trans-2-enoyl-CoA red 96.5 0.015 3.2E-07 37.9 6.2 34 12-49 40-75 (398)
330 PRK05690 molybdopterin biosynt 96.5 0.01 2.3E-07 36.0 5.1 40 8-50 27-66 (245)
331 cd01485 E1-1_like Ubiquitin ac 96.5 0.0079 1.7E-07 35.4 4.4 39 8-49 14-52 (198)
332 PRK02472 murD UDP-N-acetylmura 96.5 0.0096 2.1E-07 38.5 5.1 37 11-51 3-39 (447)
333 PF02737 3HCDH_N: 3-hydroxyacy 96.5 0.0043 9.3E-08 36.0 3.2 33 15-51 1-33 (180)
334 cd01337 MDH_glyoxysomal_mitoch 96.4 0.011 2.3E-07 37.3 5.1 35 14-49 1-35 (310)
335 PRK09496 trkA potassium transp 96.4 0.0064 1.4E-07 39.2 4.2 34 14-51 1-34 (453)
336 PF03435 Saccharop_dh: Sacchar 96.4 0.0077 1.7E-07 38.3 4.5 34 16-51 1-34 (386)
337 TIGR01759 MalateDH-SF1 malate 96.4 0.02 4.3E-07 36.2 6.2 36 14-50 4-44 (323)
338 PLN02520 bifunctional 3-dehydr 96.4 0.0087 1.9E-07 40.0 4.8 36 11-50 377-412 (529)
339 cd01338 MDH_choloroplast_like 96.4 0.0093 2E-07 37.6 4.6 38 13-51 2-44 (322)
340 PRK14192 bifunctional 5,10-met 96.4 0.011 2.4E-07 36.7 4.8 36 11-49 157-192 (283)
341 PRK07688 thiamine/molybdopteri 96.3 0.013 2.8E-07 37.3 5.0 40 8-50 19-58 (339)
342 PF13241 NAD_binding_7: Putati 96.3 0.011 2.4E-07 31.3 4.1 35 11-49 5-39 (103)
343 TIGR00507 aroE shikimate 5-deh 96.3 0.014 3E-07 35.7 4.9 36 12-51 116-151 (270)
344 PRK06444 prephenate dehydrogen 96.3 0.0095 2.1E-07 35.3 4.1 28 14-44 1-28 (197)
345 cd08295 double_bond_reductase_ 96.3 0.013 2.8E-07 36.3 4.8 36 12-50 151-186 (338)
346 cd08259 Zn_ADH5 Alcohol dehydr 96.2 0.014 3.1E-07 35.6 4.8 36 12-50 162-197 (332)
347 cd01492 Aos1_SUMO Ubiquitin ac 96.2 0.013 2.8E-07 34.6 4.4 39 8-49 16-54 (197)
348 TIGR02853 spore_dpaA dipicolin 96.2 0.014 3E-07 36.3 4.7 37 11-51 149-185 (287)
349 COG2085 Predicted dinucleotide 96.2 0.022 4.8E-07 34.2 5.3 34 15-51 2-35 (211)
350 PRK11863 N-acetyl-gamma-glutam 96.2 0.015 3.3E-07 36.7 4.9 34 14-49 3-36 (313)
351 PRK05442 malate dehydrogenase; 96.2 0.017 3.7E-07 36.6 5.0 37 13-50 4-45 (326)
352 PRK06728 aspartate-semialdehyd 96.2 0.019 4.1E-07 36.8 5.2 35 13-48 5-41 (347)
353 PRK00048 dihydrodipicolinate r 96.2 0.023 5E-07 34.7 5.4 36 14-50 2-37 (257)
354 TIGR01851 argC_other N-acetyl- 96.2 0.013 2.7E-07 37.1 4.3 31 15-47 3-33 (310)
355 PRK00066 ldh L-lactate dehydro 96.1 0.043 9.3E-07 34.5 6.7 38 12-51 5-42 (315)
356 COG0136 Asd Aspartate-semialde 96.1 0.019 4.1E-07 36.7 5.0 36 14-49 2-37 (334)
357 PF02670 DXP_reductoisom: 1-de 96.1 0.025 5.4E-07 31.5 4.9 34 16-50 1-34 (129)
358 PRK14194 bifunctional 5,10-met 96.1 0.016 3.6E-07 36.4 4.6 38 11-51 157-194 (301)
359 COG0002 ArgC Acetylglutamate s 96.1 0.012 2.5E-07 37.8 3.9 35 14-50 3-37 (349)
360 PRK14188 bifunctional 5,10-met 96.1 0.019 4.1E-07 36.1 4.8 37 11-50 156-193 (296)
361 KOG1209|consensus 96.1 0.018 4E-07 35.3 4.6 36 13-51 7-43 (289)
362 PRK14175 bifunctional 5,10-met 96.1 0.023 5E-07 35.5 5.0 37 11-50 156-192 (286)
363 KOG1210|consensus 96.0 0.0093 2E-07 37.9 3.2 36 14-52 34-69 (331)
364 TIGR02356 adenyl_thiF thiazole 96.0 0.026 5.7E-07 33.2 5.0 40 8-50 16-55 (202)
365 PRK12475 thiamine/molybdopteri 96.0 0.017 3.7E-07 36.7 4.4 40 8-50 19-58 (338)
366 PF04127 DFP: DNA / pantothena 96.0 0.029 6.2E-07 32.9 5.1 37 11-50 1-53 (185)
367 PF02826 2-Hacid_dh_C: D-isome 96.0 0.037 8E-07 31.9 5.5 38 10-51 33-70 (178)
368 TIGR01772 MDH_euk_gproteo mala 96.0 0.021 4.4E-07 36.0 4.6 35 15-50 1-35 (312)
369 cd05191 NAD_bind_amino_acid_DH 96.0 0.038 8.2E-07 28.2 5.0 35 11-48 21-55 (86)
370 cd08294 leukotriene_B4_DH_like 95.9 0.024 5.2E-07 34.7 4.8 36 12-50 143-178 (329)
371 PRK01438 murD UDP-N-acetylmura 95.9 0.062 1.3E-06 35.2 6.9 36 11-50 14-49 (480)
372 TIGR02354 thiF_fam2 thiamine b 95.9 0.025 5.3E-07 33.5 4.6 40 7-49 15-54 (200)
373 PRK06522 2-dehydropantoate 2-r 95.9 0.021 4.5E-07 35.0 4.4 34 14-51 1-34 (304)
374 TIGR02825 B4_12hDH leukotriene 95.9 0.028 6E-07 34.6 5.0 36 12-50 138-173 (325)
375 PLN02256 arogenate dehydrogena 95.9 0.025 5.5E-07 35.4 4.7 36 11-50 34-69 (304)
376 cd08293 PTGR2 Prostaglandin re 95.9 0.02 4.3E-07 35.4 4.2 34 14-50 156-190 (345)
377 PRK08818 prephenate dehydrogen 95.8 0.049 1.1E-06 35.2 6.0 37 12-50 3-39 (370)
378 smart00859 Semialdhyde_dh Semi 95.8 0.041 8.9E-07 29.6 5.0 33 15-49 1-34 (122)
379 COG0604 Qor NADPH:quinone redu 95.8 0.024 5.2E-07 35.7 4.4 33 13-48 143-175 (326)
380 TIGR01758 MDH_euk_cyt malate d 95.8 0.027 5.8E-07 35.6 4.6 37 15-51 1-41 (324)
381 PRK12409 D-amino acid dehydrog 95.7 0.036 7.7E-07 35.3 4.9 32 15-50 3-34 (410)
382 PRK09260 3-hydroxybutyryl-CoA 95.6 0.022 4.7E-07 35.0 3.7 34 14-51 2-35 (288)
383 cd08253 zeta_crystallin Zeta-c 95.6 0.041 9E-07 33.1 4.8 37 11-50 143-179 (325)
384 cd05291 HicDH_like L-2-hydroxy 95.6 0.067 1.4E-06 33.4 5.7 37 14-52 1-37 (306)
385 PLN03154 putative allyl alcoho 95.5 0.035 7.6E-07 34.9 4.5 36 12-50 158-193 (348)
386 KOG1198|consensus 95.5 0.039 8.4E-07 35.3 4.7 26 11-36 156-181 (347)
387 cd05213 NAD_bind_Glutamyl_tRNA 95.5 0.04 8.7E-07 34.5 4.6 38 11-51 176-213 (311)
388 cd00757 ThiF_MoeB_HesA_family 95.5 0.048 1E-06 32.6 4.8 39 8-49 16-54 (228)
389 PRK07417 arogenate dehydrogena 95.5 0.032 7E-07 34.2 4.1 34 14-51 1-34 (279)
390 PRK07819 3-hydroxybutyryl-CoA 95.4 0.033 7.2E-07 34.5 4.1 35 14-52 6-40 (286)
391 cd05293 LDH_1 A subgroup of L- 95.4 0.11 2.3E-06 32.7 6.4 36 14-51 4-39 (312)
392 cd05212 NAD_bind_m-THF_DH_Cycl 95.4 0.036 7.8E-07 31.2 3.8 37 11-50 26-62 (140)
393 PTZ00117 malate dehydrogenase; 95.4 0.076 1.6E-06 33.4 5.6 39 11-52 3-41 (319)
394 PRK08306 dipicolinate synthase 95.4 0.051 1.1E-06 33.9 4.8 37 11-51 150-186 (296)
395 cd05292 LDH_2 A subgroup of L- 95.4 0.051 1.1E-06 34.0 4.9 36 14-51 1-36 (308)
396 COG0569 TrkA K+ transport syst 95.4 0.035 7.6E-07 33.3 4.0 34 14-51 1-34 (225)
397 PRK14027 quinate/shikimate deh 95.4 0.056 1.2E-06 33.6 5.0 38 11-51 125-162 (283)
398 cd05276 p53_inducible_oxidored 95.4 0.058 1.2E-06 32.4 4.9 36 11-49 138-173 (323)
399 PF13561 adh_short_C2: Enoyl-( 95.4 0.026 5.7E-07 33.4 3.3 29 20-51 1-31 (241)
400 PRK00711 D-amino acid dehydrog 95.4 0.054 1.2E-06 34.5 4.9 33 14-50 1-33 (416)
401 cd08289 MDR_yhfp_like Yhfp put 95.4 0.035 7.7E-07 33.9 4.0 35 13-50 147-181 (326)
402 TIGR01745 asd_gamma aspartate- 95.3 0.051 1.1E-06 35.1 4.7 35 14-48 1-36 (366)
403 PRK06598 aspartate-semialdehyd 95.3 0.024 5.2E-07 36.6 3.2 34 14-48 2-37 (369)
404 TIGR01035 hemA glutamyl-tRNA r 95.3 0.056 1.2E-06 35.2 4.9 38 11-51 178-215 (417)
405 PRK13243 glyoxylate reductase; 95.3 0.061 1.3E-06 34.1 4.9 38 10-51 147-184 (333)
406 cd01483 E1_enzyme_family Super 95.3 0.07 1.5E-06 29.5 4.7 33 15-50 1-33 (143)
407 PRK05597 molybdopterin biosynt 95.3 0.048 1E-06 34.9 4.4 40 8-50 23-62 (355)
408 TIGR01809 Shik-DH-AROM shikima 95.3 0.069 1.5E-06 33.1 5.0 38 11-51 123-160 (282)
409 PRK12749 quinate/shikimate deh 95.2 0.087 1.9E-06 32.8 5.5 38 11-51 122-159 (288)
410 COG0039 Mdh Malate/lactate deh 95.2 0.073 1.6E-06 33.8 5.1 36 14-51 1-36 (313)
411 PRK12549 shikimate 5-dehydroge 95.2 0.07 1.5E-06 33.1 5.0 38 11-51 125-162 (284)
412 KOG1199|consensus 95.2 0.069 1.5E-06 31.9 4.7 40 9-51 5-44 (260)
413 cd00650 LDH_MDH_like NAD-depen 95.2 0.066 1.4E-06 32.6 4.8 37 16-52 1-38 (263)
414 PLN02545 3-hydroxybutyryl-CoA 95.2 0.043 9.3E-07 33.8 4.0 34 14-51 5-38 (295)
415 PRK09310 aroDE bifunctional 3- 95.2 0.065 1.4E-06 35.5 5.0 36 11-50 330-365 (477)
416 PRK05476 S-adenosyl-L-homocyst 95.2 0.065 1.4E-06 35.2 4.9 37 11-51 210-246 (425)
417 cd08268 MDR2 Medium chain dehy 95.2 0.071 1.5E-06 32.2 4.9 36 12-50 144-179 (328)
418 cd08230 glucose_DH Glucose deh 95.1 0.11 2.3E-06 32.6 5.7 34 12-49 172-205 (355)
419 PRK08644 thiamine biosynthesis 95.1 0.057 1.2E-06 32.2 4.3 39 8-49 23-61 (212)
420 PRK05447 1-deoxy-D-xylulose 5- 95.1 0.074 1.6E-06 34.6 5.0 35 14-49 2-36 (385)
421 PF03807 F420_oxidored: NADP o 95.1 0.087 1.9E-06 27.0 4.5 36 15-51 1-37 (96)
422 cd05188 MDR Medium chain reduc 95.1 0.055 1.2E-06 31.8 4.2 36 11-50 133-168 (271)
423 PRK07530 3-hydroxybutyryl-CoA 95.1 0.051 1.1E-06 33.4 4.1 35 13-51 4-38 (292)
424 PRK06223 malate dehydrogenase; 95.1 0.081 1.8E-06 32.8 5.0 35 14-51 3-37 (307)
425 PRK09496 trkA potassium transp 95.1 0.068 1.5E-06 34.5 4.8 36 12-51 230-265 (453)
426 PF00899 ThiF: ThiF family; I 95.1 0.11 2.4E-06 28.5 5.1 34 13-49 2-35 (135)
427 PRK14189 bifunctional 5,10-met 95.1 0.039 8.5E-07 34.5 3.6 36 11-49 156-191 (285)
428 PRK05808 3-hydroxybutyryl-CoA 95.1 0.045 9.8E-07 33.5 3.8 34 14-51 4-37 (282)
429 cd05311 NAD_bind_2_malic_enz N 95.1 0.086 1.9E-06 31.7 4.9 37 11-50 23-61 (226)
430 PRK14179 bifunctional 5,10-met 95.0 0.13 2.8E-06 32.3 5.7 33 11-46 156-188 (284)
431 COG0289 DapB Dihydrodipicolina 95.0 0.097 2.1E-06 32.5 5.1 38 13-51 2-39 (266)
432 TIGR00243 Dxr 1-deoxy-D-xylulo 95.0 0.072 1.6E-06 34.7 4.7 36 14-50 2-37 (389)
433 PF02882 THF_DHG_CYH_C: Tetrah 95.0 0.1 2.2E-06 30.1 4.8 36 11-49 34-69 (160)
434 PLN00112 malate dehydrogenase 94.9 0.19 4.1E-06 33.3 6.6 40 13-52 100-145 (444)
435 cd08250 Mgc45594_like Mgc45594 94.9 0.071 1.5E-06 32.7 4.5 37 11-50 138-174 (329)
436 PRK08293 3-hydroxybutyryl-CoA 94.9 0.076 1.6E-06 32.7 4.5 34 14-51 4-37 (287)
437 TIGR02824 quinone_pig3 putativ 94.8 0.096 2.1E-06 31.5 4.8 36 12-50 139-174 (325)
438 PRK00094 gpsA NAD(P)H-dependen 94.8 0.076 1.6E-06 32.8 4.4 34 14-51 2-35 (325)
439 KOG0023|consensus 94.8 0.12 2.6E-06 33.2 5.2 36 12-51 181-216 (360)
440 PRK08328 hypothetical protein; 94.8 0.1 2.2E-06 31.4 4.8 39 9-50 23-61 (231)
441 PRK14619 NAD(P)H-dependent gly 94.8 0.12 2.7E-06 32.1 5.2 36 12-51 3-38 (308)
442 PRK12480 D-lactate dehydrogena 94.8 0.11 2.4E-06 33.0 5.0 38 10-51 143-180 (330)
443 TIGR02355 moeB molybdopterin s 94.7 0.11 2.3E-06 31.6 4.8 40 8-50 19-58 (240)
444 cd05288 PGDH Prostaglandin deh 94.7 0.094 2E-06 32.1 4.6 36 12-50 145-180 (329)
445 PLN02602 lactate dehydrogenase 94.7 0.23 4.9E-06 31.9 6.4 36 14-51 38-73 (350)
446 PRK06035 3-hydroxyacyl-CoA deh 94.7 0.083 1.8E-06 32.6 4.3 34 14-51 4-37 (291)
447 cd08266 Zn_ADH_like1 Alcohol d 94.7 0.11 2.4E-06 31.6 4.8 37 11-50 165-201 (342)
448 PRK13940 glutamyl-tRNA reducta 94.7 0.1 2.2E-06 34.1 4.8 38 11-51 179-216 (414)
449 PRK06901 aspartate-semialdehyd 94.7 0.067 1.5E-06 34.1 3.9 35 14-49 4-38 (322)
450 PRK10792 bifunctional 5,10-met 94.6 0.067 1.5E-06 33.5 3.8 37 11-50 157-193 (285)
451 PRK14180 bifunctional 5,10-met 94.6 0.068 1.5E-06 33.4 3.8 37 11-50 156-192 (282)
452 PF03721 UDPG_MGDP_dh_N: UDP-g 94.6 0.093 2E-06 30.6 4.1 33 14-50 1-33 (185)
453 cd05290 LDH_3 A subgroup of L- 94.6 0.21 4.6E-06 31.4 5.9 35 15-51 1-35 (307)
454 TIGR00036 dapB dihydrodipicoli 94.5 0.15 3.2E-06 31.4 5.1 35 14-49 2-36 (266)
455 cd05280 MDR_yhdh_yhfp Yhdh and 94.5 0.084 1.8E-06 32.1 4.0 35 13-50 147-181 (325)
456 PLN02712 arogenate dehydrogena 94.5 0.12 2.6E-06 35.7 5.0 36 11-50 367-402 (667)
457 PRK09880 L-idonate 5-dehydroge 94.5 0.073 1.6E-06 33.2 3.7 37 12-51 169-205 (343)
458 PRK08223 hypothetical protein; 94.4 0.1 2.2E-06 32.7 4.2 40 8-50 22-61 (287)
459 TIGR03201 dearomat_had 6-hydro 94.4 0.07 1.5E-06 33.4 3.5 35 12-50 166-200 (349)
460 PRK14176 bifunctional 5,10-met 94.4 0.084 1.8E-06 33.1 3.8 37 11-50 162-198 (287)
461 PRK07679 pyrroline-5-carboxyla 94.4 0.14 3.1E-06 31.3 4.8 38 12-50 2-40 (279)
462 cd08244 MDR_enoyl_red Possible 94.4 0.15 3.2E-06 31.1 4.8 36 12-50 142-177 (324)
463 PRK14177 bifunctional 5,10-met 94.3 0.075 1.6E-06 33.3 3.5 37 11-50 157-193 (284)
464 PRK00676 hemA glutamyl-tRNA re 94.3 0.14 3.1E-06 32.8 4.8 38 11-51 172-209 (338)
465 PRK14173 bifunctional 5,10-met 94.3 0.079 1.7E-06 33.2 3.6 36 11-49 153-188 (287)
466 PRK06130 3-hydroxybutyryl-CoA 94.3 0.14 3E-06 31.7 4.7 34 14-51 5-38 (311)
467 PRK06249 2-dehydropantoate 2-r 94.3 0.18 4E-06 31.4 5.2 35 12-50 4-38 (313)
468 PLN00203 glutamyl-tRNA reducta 94.3 0.13 2.8E-06 34.7 4.7 38 11-51 264-301 (519)
469 TIGR02822 adh_fam_2 zinc-bindi 94.3 0.11 2.3E-06 32.5 4.1 36 12-51 165-200 (329)
470 PRK15116 sulfur acceptor prote 94.3 0.13 2.8E-06 31.9 4.4 38 10-50 27-64 (268)
471 cd08243 quinone_oxidoreductase 94.2 0.16 3.4E-06 30.7 4.8 36 12-50 142-177 (320)
472 PRK14191 bifunctional 5,10-met 94.2 0.16 3.4E-06 31.9 4.7 34 11-47 155-188 (285)
473 PRK11064 wecC UDP-N-acetyl-D-m 94.2 0.11 2.4E-06 33.8 4.3 34 14-51 4-37 (415)
474 PTZ00082 L-lactate dehydrogena 94.2 0.19 4.2E-06 31.7 5.2 39 11-52 4-42 (321)
475 PRK14172 bifunctional 5,10-met 94.2 0.089 1.9E-06 32.9 3.6 36 11-49 156-191 (278)
476 cd00755 YgdL_like Family of ac 94.2 0.13 2.9E-06 31.1 4.3 40 8-50 6-45 (231)
477 PRK14031 glutamate dehydrogena 94.2 0.17 3.6E-06 33.6 5.0 34 11-48 226-259 (444)
478 TIGR02114 coaB_strep phosphopa 94.2 0.076 1.6E-06 31.9 3.2 26 20-48 22-47 (227)
479 KOG1610|consensus 94.2 0.13 2.8E-06 32.8 4.3 35 11-48 27-61 (322)
480 PLN02696 1-deoxy-D-xylulose-5- 94.1 0.16 3.4E-06 33.8 4.8 35 14-49 58-92 (454)
481 PRK07066 3-hydroxybutyryl-CoA 94.1 0.14 3.1E-06 32.5 4.5 35 13-51 7-41 (321)
482 cd08292 ETR_like_2 2-enoyl thi 94.1 0.13 2.9E-06 31.3 4.3 35 12-49 139-173 (324)
483 PRK00045 hemA glutamyl-tRNA re 94.1 0.17 3.7E-06 33.0 4.9 38 11-51 180-217 (423)
484 cd05289 MDR_like_2 alcohol deh 94.0 0.21 4.6E-06 29.8 5.0 36 11-49 143-178 (309)
485 cd08241 QOR1 Quinone oxidoredu 94.0 0.17 3.6E-06 30.4 4.6 36 12-50 139-174 (323)
486 COG0169 AroE Shikimate 5-dehyd 94.0 0.27 5.9E-06 30.8 5.6 37 12-51 125-161 (283)
487 cd05282 ETR_like 2-enoyl thioe 94.0 0.13 2.7E-06 31.3 4.0 37 11-50 137-173 (323)
488 PRK14190 bifunctional 5,10-met 94.0 0.093 2E-06 32.9 3.4 35 11-48 156-190 (284)
489 COG0287 TyrA Prephenate dehydr 94.0 0.2 4.3E-06 31.2 4.9 34 14-51 4-37 (279)
490 PF03446 NAD_binding_2: NAD bi 94.0 0.24 5.1E-06 28.1 4.9 33 14-50 2-34 (163)
491 cd08270 MDR4 Medium chain dehy 94.0 0.13 2.8E-06 31.1 4.0 36 12-50 132-167 (305)
492 PF00070 Pyr_redox: Pyridine n 94.0 0.3 6.6E-06 24.3 4.8 33 16-52 2-34 (80)
493 cd08288 MDR_yhdh Yhdh putative 94.0 0.19 4E-06 30.7 4.7 36 12-50 146-181 (324)
494 cd05295 MDH_like Malate dehydr 93.9 0.3 6.5E-06 32.5 5.8 37 13-49 123-163 (452)
495 PLN02928 oxidoreductase family 93.9 0.2 4.3E-06 32.0 4.9 36 10-49 156-191 (347)
496 PRK14186 bifunctional 5,10-met 93.9 0.11 2.3E-06 32.8 3.6 35 11-48 156-190 (297)
497 COG1064 AdhP Zn-dependent alco 93.9 0.14 3E-06 32.9 4.1 38 11-52 165-202 (339)
498 PRK08762 molybdopterin biosynt 93.9 0.16 3.4E-06 32.7 4.4 38 9-49 131-168 (376)
499 PRK08268 3-hydroxy-acyl-CoA de 93.9 0.12 2.7E-06 34.5 4.1 34 14-51 8-41 (507)
500 cd05286 QOR2 Quinone oxidoredu 93.9 0.19 4.2E-06 30.1 4.6 36 11-49 135-170 (320)
No 1
>PLN02996 fatty acyl-CoA reductase
Probab=99.38 E-value=3.3e-12 Score=83.07 Aligned_cols=56 Identities=32% Similarity=0.697 Sum_probs=48.6
Q ss_pred cchhhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHH
Q psy17490 5 QKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVK 60 (67)
Q Consensus 5 ~~~~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~ 60 (67)
..+.+++++++|+|||||||+|+++++.|+...++..+|+++.|........+++.
T Consensus 3 ~~i~~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~ 58 (491)
T PLN02996 3 GSCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLH 58 (491)
T ss_pred ccHHHHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHH
Confidence 35678999999999999999999999999987666779999999888777777764
No 2
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.34 E-value=4.5e-12 Score=84.25 Aligned_cols=55 Identities=42% Similarity=0.854 Sum_probs=47.9
Q ss_pred chhhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHH
Q psy17490 6 KVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVK 60 (67)
Q Consensus 6 ~~~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~ 60 (67)
.+.+++++++|+|||||||+|+++++.|++..++..+|+++.|.+....+.+++.
T Consensus 112 ~I~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~ 166 (605)
T PLN02503 112 GIAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLK 166 (605)
T ss_pred chhhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHH
Confidence 4567899999999999999999999999987666679999999887777777774
No 3
>KOG1221|consensus
Probab=99.31 E-value=1.1e-11 Score=80.32 Aligned_cols=60 Identities=47% Similarity=0.927 Sum_probs=54.9
Q ss_pred chhhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHHHHhhc
Q psy17490 6 KVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNS 65 (67)
Q Consensus 6 ~~~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~ 65 (67)
+..+++++++|+|||||||+|+-+++.|++..|+..+|+++.|.+...++.+|+..++.+
T Consensus 5 ~i~~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~ 64 (467)
T KOG1221|consen 5 DIVQFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKD 64 (467)
T ss_pred cHHHHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhh
Confidence 467899999999999999999999999999988888999999999999999998887665
No 4
>KOG1502|consensus
Probab=99.24 E-value=2.1e-11 Score=76.14 Aligned_cols=46 Identities=26% Similarity=0.444 Sum_probs=38.9
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHH
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVK 60 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~ 60 (67)
.+++++||||+||||+|+++.|+++ |+.|+...|++.+....+.+.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~r---GY~V~gtVR~~~~~k~~~~L~ 50 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSR---GYTVRGTVRDPEDEKKTEHLR 50 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhC---CCEEEEEEcCcchhhhHHHHH
Confidence 5689999999999999999999998 799999999988644433333
No 5
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.05 E-value=4.5e-10 Score=70.00 Aligned_cols=37 Identities=24% Similarity=0.300 Sum_probs=33.1
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++|+|+||||+||||++++++|+++ +++|++++|..
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~---g~~V~~~d~~~ 49 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFL---NQTVIGLDNFS 49 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHC---CCEEEEEeCCC
Confidence 56789999999999999999999997 57999999854
No 6
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.03 E-value=5.2e-10 Score=70.92 Aligned_cols=49 Identities=27% Similarity=0.517 Sum_probs=42.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHHHHhh
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN 64 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~ 64 (67)
+++++||||||+|++++.+|+.+.+ .+|+|++|..+++.+.+|+++.+.
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~--~kv~cLVRA~s~E~a~~RL~~~~~ 49 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSD--AKVICLVRAQSDEAALARLEKTFD 49 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCC--CcEEEEEecCCHHHHHHHHHHHhh
Confidence 4799999999999999999999743 599999999887778888877654
No 7
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.02 E-value=7.3e-10 Score=68.90 Aligned_cols=39 Identities=36% Similarity=0.475 Sum_probs=34.8
Q ss_pred hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++++|+|+||||+||||+++++.|++. +++|++++|+..
T Consensus 1 ~~~~k~ilItGatG~IG~~l~~~L~~~---G~~V~~~~r~~~ 39 (349)
T TIGR02622 1 FWQGKKVLVTGHTGFKGSWLSLWLLEL---GAEVYGYSLDPP 39 (349)
T ss_pred CcCCCEEEEECCCChhHHHHHHHHHHC---CCEEEEEeCCCc
Confidence 367899999999999999999999997 689999998765
No 8
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.01 E-value=1.1e-09 Score=67.00 Aligned_cols=37 Identities=27% Similarity=0.430 Sum_probs=33.1
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++++|+||||+||||++++++|+++ +++|++++|+..
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~---g~~V~~~~r~~~ 39 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQR---GYTVKATVRDPN 39 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHC---CCEEEEEEcCCC
Confidence 4689999999999999999999997 689999998754
No 9
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.00 E-value=5.5e-10 Score=66.96 Aligned_cols=44 Identities=45% Similarity=0.807 Sum_probs=33.3
Q ss_pred EEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHHHH
Q psy17490 18 VTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNM 62 (67)
Q Consensus 18 itGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~ 62 (67)
|||||||+|++++.+|+++.+.. +|+|+.|..+.....+++.+.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~-~I~cLvR~~~~~~~~~rl~~~ 44 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDV-KIYCLVRASSSQSALERLKDA 44 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TT-EEEEEE-SSSHHHHHHHHHGG
T ss_pred CcCCCcHHHHHHHHHHHcCCCCc-EEEEEEeCcccccchhhhhhh
Confidence 79999999999999999985333 999999987655566666544
No 10
>PLN02427 UDP-apiose/xylose synthase
Probab=98.96 E-value=1.4e-09 Score=68.51 Aligned_cols=39 Identities=21% Similarity=0.264 Sum_probs=33.2
Q ss_pred hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
..+.|+|+||||+||||+++++.|+++. +++|++++|..
T Consensus 11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~--g~~V~~l~r~~ 49 (386)
T PLN02427 11 PIKPLTICMIGAGGFIGSHLCEKLMTET--PHKVLALDVYN 49 (386)
T ss_pred cccCcEEEEECCcchHHHHHHHHHHhcC--CCEEEEEecCc
Confidence 4566899999999999999999999962 47899998764
No 11
>CHL00194 ycf39 Ycf39; Provisional
Probab=98.96 E-value=1.1e-09 Score=67.49 Aligned_cols=35 Identities=26% Similarity=0.437 Sum_probs=31.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
|+|+|||||||+|++++++|+++ +++|++++|+.+
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~---g~~V~~l~R~~~ 35 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDE---GYQVRCLVRNLR 35 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHC---CCeEEEEEcChH
Confidence 57999999999999999999997 689999999753
No 12
>PLN02572 UDP-sulfoquinovose synthase
Probab=98.95 E-value=1.4e-09 Score=70.14 Aligned_cols=37 Identities=19% Similarity=0.257 Sum_probs=32.7
Q ss_pred hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490 9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 48 (67)
Q Consensus 9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r 48 (67)
..+++++|+||||+||||++++++|+++ +++|+++++
T Consensus 43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~---G~~V~~~d~ 79 (442)
T PLN02572 43 SSSKKKKVMVIGGDGYCGWATALHLSKR---GYEVAIVDN 79 (442)
T ss_pred ccccCCEEEEECCCcHHHHHHHHHHHHC---CCeEEEEec
Confidence 4467889999999999999999999997 688999875
No 13
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=98.93 E-value=1.9e-09 Score=72.16 Aligned_cols=41 Identities=29% Similarity=0.486 Sum_probs=35.0
Q ss_pred hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++|+|+||||+||||++++++|+++ .+++|++++|...
T Consensus 311 ~~~~~~~VLVTGatGFIGs~Lv~~Ll~~--~g~~V~~l~r~~~ 351 (660)
T PRK08125 311 SAKRRTRVLILGVNGFIGNHLTERLLRD--DNYEVYGLDIGSD 351 (660)
T ss_pred hhhcCCEEEEECCCchHHHHHHHHHHhC--CCcEEEEEeCCch
Confidence 3567899999999999999999999985 2589999998653
No 14
>PLN02206 UDP-glucuronate decarboxylase
Probab=98.93 E-value=1.8e-09 Score=69.74 Aligned_cols=35 Identities=29% Similarity=0.588 Sum_probs=31.8
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
++|+|+||||+||||++++++|+++ +++|++++|.
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~---G~~V~~ld~~ 152 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMAR---GDSVIVVDNF 152 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHC---cCEEEEEeCC
Confidence 5689999999999999999999997 6899998875
No 15
>PLN00198 anthocyanidin reductase; Provisional
Probab=98.92 E-value=2.5e-09 Score=66.12 Aligned_cols=38 Identities=39% Similarity=0.505 Sum_probs=33.3
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++|+||||+||||++++++|++. +++|+++.|+..
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~---g~~V~~~~r~~~ 44 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQK---GYAVNTTVRDPE 44 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHC---CCEEEEEECCCC
Confidence 45789999999999999999999997 678988888754
No 16
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=98.92 E-value=2.3e-09 Score=66.53 Aligned_cols=35 Identities=29% Similarity=0.264 Sum_probs=31.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++|+||||+||||+++++.|++. +++|++++|.+.
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~---G~~V~~~~r~~~ 35 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEK---GYEVHGLIRRSS 35 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHC---CCEEEEEecCCc
Confidence 57999999999999999999997 689999998753
No 17
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=98.92 E-value=2.3e-09 Score=69.12 Aligned_cols=35 Identities=34% Similarity=0.535 Sum_probs=31.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.|+|+||||+||||++++++|++. +++|++++|..
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~---G~~V~~ldr~~ 154 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGR---GDEVIVIDNFF 154 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHC---CCEEEEEeCCC
Confidence 478999999999999999999997 68999999853
No 18
>PLN02583 cinnamoyl-CoA reductase
Probab=98.91 E-value=4.5e-09 Score=64.33 Aligned_cols=35 Identities=20% Similarity=0.359 Sum_probs=31.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++||||+||||++++++|+++ +++|++++|+.
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~---G~~V~~~~R~~ 40 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSR---GYTVHAAVQKN 40 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC---CCEEEEEEcCc
Confidence 578999999999999999999997 68999999864
No 19
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=98.89 E-value=5.8e-09 Score=64.09 Aligned_cols=37 Identities=24% Similarity=0.353 Sum_probs=33.0
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.+++|+||||+||||++++++|+++ +++|+++.|+..
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~---g~~V~~~~r~~~ 40 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLR---GYTVKATVRDLT 40 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEECCCc
Confidence 4689999999999999999999997 688998888755
No 20
>PLN02650 dihydroflavonol-4-reductase
Probab=98.89 E-value=5e-09 Score=65.16 Aligned_cols=37 Identities=32% Similarity=0.525 Sum_probs=32.5
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
..++|+||||+||||++++++|++. +++|++++|+..
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~---G~~V~~~~r~~~ 40 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLER---GYTVRATVRDPA 40 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHC---CCEEEEEEcCcc
Confidence 3568999999999999999999997 689999988754
No 21
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=98.89 E-value=4.2e-09 Score=66.40 Aligned_cols=36 Identities=22% Similarity=0.233 Sum_probs=32.7
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
++|+|+||||+||||+++++.|+++ +++|++++|..
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~---G~~V~~v~r~~ 55 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAE---GHYIIASDWKK 55 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhC---CCEEEEEEecc
Confidence 5789999999999999999999997 68999999854
No 22
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=98.87 E-value=8.1e-09 Score=63.31 Aligned_cols=33 Identities=24% Similarity=0.152 Sum_probs=28.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
|+||||||+||||++++++|++. + +|++++|..
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~---g-~V~~~~~~~ 33 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPL---G-NLIALDVHS 33 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhcc---C-CEEEecccc
Confidence 57999999999999999999987 4 688888864
No 23
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=98.87 E-value=4.6e-09 Score=65.03 Aligned_cols=38 Identities=26% Similarity=0.204 Sum_probs=33.4
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.++++++||||+||||++++++|+++ +++|++++|.+.
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~---G~~V~~~~r~~~ 41 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSK---GYEVHGIIRRSS 41 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHC---CCEEEEEecccc
Confidence 45789999999999999999999997 679999988643
No 24
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.86 E-value=5.6e-09 Score=63.30 Aligned_cols=34 Identities=38% Similarity=0.642 Sum_probs=31.0
Q ss_pred eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+|+||||+||||+++++.|+++ +++|+.++|...
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~---g~~V~~~~r~~~ 35 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAA---GHDVRGLDRLRD 35 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhC---CCeEEEEeCCCc
Confidence 4999999999999999999997 789999998654
No 25
>PLN02214 cinnamoyl-CoA reductase
Probab=98.85 E-value=6.2e-09 Score=64.91 Aligned_cols=38 Identities=21% Similarity=0.296 Sum_probs=33.9
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.++++|+||||+||||+++++.|+++ +++|++++|+.+
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~---G~~V~~~~r~~~ 45 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLER---GYTVKGTVRNPD 45 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC---cCEEEEEeCCch
Confidence 46789999999999999999999997 689999998754
No 26
>KOG1429|consensus
Probab=98.84 E-value=7.2e-09 Score=64.29 Aligned_cols=37 Identities=32% Similarity=0.530 Sum_probs=32.8
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
..+++|+||||.||||+||++.|+.. +++|+++|--.
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~e---gh~VIa~Dn~f 61 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTE---GHEVIALDNYF 61 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhc---CCeEEEEeccc
Confidence 45689999999999999999999997 69999998643
No 27
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=98.83 E-value=6.5e-09 Score=63.90 Aligned_cols=37 Identities=35% Similarity=0.659 Sum_probs=30.8
Q ss_pred eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490 15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG 52 (67)
Q Consensus 15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~ 52 (67)
+|+|||||||+|++++++|++++. ..+|++++|+.+.
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~-~~~V~~l~R~~~~ 37 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRST-QAKVICLVRAASE 37 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCC-CCEEEEEEccCCH
Confidence 489999999999999999999721 1579999997653
No 28
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=98.83 E-value=7.1e-09 Score=64.58 Aligned_cols=37 Identities=32% Similarity=0.493 Sum_probs=32.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
..+|+|+||||+||||++++++|+++ +++|++++|+.
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~---G~~V~~~~r~~ 44 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQR---GYTVHATLRDP 44 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCh
Confidence 35789999999999999999999997 67899888864
No 29
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=98.82 E-value=1.4e-08 Score=61.29 Aligned_cols=47 Identities=21% Similarity=0.403 Sum_probs=36.9
Q ss_pred eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHHHHhh
Q psy17490 15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN 64 (67)
Q Consensus 15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~ 64 (67)
+|+||||+||+|++++++|+++ +++|++++|...+....+.+.+.++
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~---g~~v~~~~r~~~d~~~~~~~~~~~~ 47 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPE---GRVVVALTSSQLDLTDPEALERLLR 47 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhc---CCEEEEeCCcccCCCCHHHHHHHHH
Confidence 4899999999999999999997 6899999997554444455554443
No 30
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=98.80 E-value=1.2e-08 Score=62.63 Aligned_cols=37 Identities=30% Similarity=0.400 Sum_probs=32.6
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++++++||||+||||+++++.|+++ +++|++++|+..
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~---G~~V~~~~r~~~ 40 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFR---GYTINATVRDPK 40 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHC---CCEEEEEEcCCc
Confidence 3689999999999999999999997 678988888754
No 31
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=98.80 E-value=1.1e-08 Score=63.61 Aligned_cols=35 Identities=26% Similarity=0.436 Sum_probs=30.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
|+|+||||+||||++++++|++.. +++|++++|+.
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~--~~~V~~~~r~~ 36 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETT--DWEVYGMDMQT 36 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCC--CCeEEEEeCcH
Confidence 579999999999999999999852 47899998853
No 32
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=98.79 E-value=7.1e-09 Score=63.83 Aligned_cols=34 Identities=35% Similarity=0.620 Sum_probs=31.1
Q ss_pred EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG 52 (67)
Q Consensus 16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~ 52 (67)
|+|||||||||++++..|.+. +|+|++++|++..
T Consensus 1 IliTGgTGlIG~~L~~~L~~~---gh~v~iltR~~~~ 34 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKG---GHQVTILTRRPPK 34 (297)
T ss_pred CeEeccccchhHHHHHHHHhC---CCeEEEEEcCCcc
Confidence 689999999999999999997 7999999998763
No 33
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=98.78 E-value=1e-08 Score=61.69 Aligned_cols=34 Identities=38% Similarity=0.716 Sum_probs=30.7
Q ss_pred EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG 52 (67)
Q Consensus 16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~ 52 (67)
|+||||+||||+++++.|+++ +++|++++|++..
T Consensus 1 vlVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~~ 34 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKD---GHEVTILTRSPPA 34 (292)
T ss_pred CEEEcccchhhHHHHHHHHHc---CCEEEEEeCCCCC
Confidence 689999999999999999997 6899999997654
No 34
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=98.78 E-value=1.4e-08 Score=62.98 Aligned_cols=40 Identities=40% Similarity=0.719 Sum_probs=33.1
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+||||++++++|++++ .+++|++++|+..
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g-~~~~V~~~~r~~~ 41 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENY-NPKKIIIYSRDEL 41 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhC-CCcEEEEEcCChh
Confidence 467899999999999999999999872 1268888888643
No 35
>PLN02240 UDP-glucose 4-epimerase
Probab=98.77 E-value=1.9e-08 Score=62.29 Aligned_cols=37 Identities=27% Similarity=0.388 Sum_probs=32.4
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+.+++|+||||+||+|++++++|+++ +++|++++|..
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~---g~~V~~~~~~~ 39 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLA---GYKVVVIDNLD 39 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCC
Confidence 45689999999999999999999997 58999998753
No 36
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=98.75 E-value=1.8e-08 Score=57.39 Aligned_cols=33 Identities=42% Similarity=0.659 Sum_probs=30.7
Q ss_pred EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
|+|+||||++|++++++|+++ +++|+++.|++.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~---~~~V~~~~R~~~ 33 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRR---GHEVTALVRSPS 33 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHT---TSEEEEEESSGG
T ss_pred eEEECCCChHHHHHHHHHHHC---CCEEEEEecCch
Confidence 789999999999999999998 589999999865
No 37
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=98.75 E-value=2.4e-08 Score=58.39 Aligned_cols=33 Identities=36% Similarity=0.721 Sum_probs=29.9
Q ss_pred EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
|+||||+||||++++++|+++ ++.|+.+.|+..
T Consensus 1 IlI~GatG~iG~~l~~~l~~~---g~~v~~~~~~~~ 33 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKK---GHEVIVLSRSSN 33 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHT---TTEEEEEESCST
T ss_pred EEEEccCCHHHHHHHHHHHHc---CCcccccccccc
Confidence 799999999999999999998 678888888765
No 38
>PLN02686 cinnamoyl-CoA reductase
Probab=98.75 E-value=2e-08 Score=63.27 Aligned_cols=37 Identities=32% Similarity=0.515 Sum_probs=32.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.++++|+||||+||||+++++.|+++ +++|+++.|+.
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~---G~~V~~~~r~~ 87 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRH---GYSVRIAVDTQ 87 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence 56789999999999999999999997 68998887764
No 39
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=98.74 E-value=2.3e-08 Score=63.64 Aligned_cols=38 Identities=32% Similarity=0.597 Sum_probs=33.9
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.++++|+||||+||||++++++|+++ +++|++++|+..
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~---G~~V~~l~R~~~ 95 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRR---GYNVVAVAREKS 95 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEEechh
Confidence 45679999999999999999999997 689999999764
No 40
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.72 E-value=1.9e-08 Score=59.98 Aligned_cols=35 Identities=37% Similarity=0.561 Sum_probs=32.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++|+||||||++|++++++|+.+ +++|.++.|++.
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~---~~~v~~~~r~~~ 35 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLAR---GHEVRAAVRNPE 35 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhC---CCEEEEEEeCHH
Confidence 47999999999999999999998 789999999865
No 41
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.72 E-value=2.8e-08 Score=66.52 Aligned_cols=39 Identities=28% Similarity=0.585 Sum_probs=33.1
Q ss_pred hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++.|+|+||||+||||+++++.|++..+ +++|++++|.
T Consensus 3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~-~~~V~~~d~~ 41 (668)
T PLN02260 3 TYEPKNILITGAAGFIASHVANRLIRNYP-DYKIVVLDKL 41 (668)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCC-CCEEEEEeCC
Confidence 46789999999999999999999998632 3689888874
No 42
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=98.72 E-value=2.3e-08 Score=59.59 Aligned_cols=38 Identities=13% Similarity=0.183 Sum_probs=33.8
Q ss_pred hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.+++++++||||+|+||++++++|+++ +++|++++|++
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~---G~~v~~~~r~~ 42 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAE---GARVVLVDRSE 42 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCch
Confidence 367889999999999999999999997 67899998864
No 43
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=98.71 E-value=2.3e-08 Score=60.56 Aligned_cols=34 Identities=26% Similarity=0.341 Sum_probs=30.9
Q ss_pred eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+|+||||||++|++++++|+++ +++|++++|+++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~---g~~V~~~~R~~~ 34 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAA---SVPFLVASRSSS 34 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhC---CCcEEEEeCCCc
Confidence 4899999999999999999997 689999999865
No 44
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.71 E-value=2.7e-08 Score=58.92 Aligned_cols=38 Identities=18% Similarity=0.172 Sum_probs=33.8
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|++|++++++|+++ +++|++++|++.
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~---g~~v~~~~r~~~ 39 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKE---GAKVVIADLNDE 39 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCeEEEEeCCHH
Confidence 45789999999999999999999997 689999999754
No 45
>PRK06194 hypothetical protein; Provisional
Probab=98.71 E-value=3.1e-08 Score=59.85 Aligned_cols=38 Identities=8% Similarity=0.005 Sum_probs=33.2
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||++++++|+++ +++|++++|+..
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~---G~~V~~~~r~~~ 41 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAAL---GMKLVLADVQQD 41 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHC---CCEEEEEeCChH
Confidence 45689999999999999999999997 678999988643
No 46
>PLN02778 3,5-epimerase/4-reductase
Probab=98.71 E-value=3.6e-08 Score=60.65 Aligned_cols=32 Identities=22% Similarity=0.139 Sum_probs=27.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV 47 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~ 47 (67)
.|+|+||||+||||+++++.|+++ +++|+...
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~---g~~V~~~~ 40 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQ---GIDFHYGS 40 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhC---CCEEEEec
Confidence 478999999999999999999997 57776543
No 47
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.70 E-value=3e-08 Score=61.79 Aligned_cols=33 Identities=27% Similarity=0.550 Sum_probs=30.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
|+||||||+||||+|.+.+|++. +++|+++|.-
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~---G~~vvV~DNL 33 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKT---GHEVVVLDNL 33 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHC---CCeEEEEecC
Confidence 57999999999999999999997 7899999874
No 48
>PRK05717 oxidoreductase; Validated
Probab=98.69 E-value=3.3e-08 Score=58.94 Aligned_cols=39 Identities=18% Similarity=0.048 Sum_probs=34.0
Q ss_pred hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
..+++++++||||+|+||+++++.|+++ +++|++++|+.
T Consensus 6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~---g~~v~~~~~~~ 44 (255)
T PRK05717 6 PGHNGRVALVTGAARGIGLGIAAWLIAE---GWQVVLADLDR 44 (255)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHc---CCEEEEEcCCH
Confidence 3467899999999999999999999997 67898888764
No 49
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=98.69 E-value=4.7e-08 Score=59.92 Aligned_cols=48 Identities=27% Similarity=0.380 Sum_probs=38.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHHHHhh
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN 64 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~ 64 (67)
|+||||||+|++|+++.+.|.++ ++.|+.+.|..-+....+.+..++.
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~---~~~v~~~~r~~~dl~d~~~~~~~~~ 48 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKER---GYEVIATSRSDLDLTDPEAVAKLLE 48 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTT---SEEEEEESTTCS-TTSHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHhhC---CCEEEEeCchhcCCCCHHHHHHHHH
Confidence 68999999999999999999986 5789998887666555566655544
No 50
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.69 E-value=3.9e-08 Score=58.07 Aligned_cols=38 Identities=13% Similarity=0.235 Sum_probs=34.0
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|++|.+++++|+++ +++|++++|++.
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~---G~~V~~~~r~~~ 40 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAE---GARVVVTDRNEE 40 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 56789999999999999999999987 678999999864
No 51
>PRK12828 short chain dehydrogenase; Provisional
Probab=98.69 E-value=6.2e-08 Score=56.68 Aligned_cols=38 Identities=18% Similarity=0.249 Sum_probs=33.8
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||++++++|+++ +++|++++|++.
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~---G~~v~~~~r~~~ 42 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAAR---GARVALIGRGAA 42 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHC---CCeEEEEeCChH
Confidence 56789999999999999999999987 678999999653
No 52
>PRK09135 pteridine reductase; Provisional
Probab=98.69 E-value=7.7e-08 Score=56.68 Aligned_cols=37 Identities=19% Similarity=0.166 Sum_probs=32.5
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
..+++++||||+|+||++++++|++. +++|++++|+.
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~---g~~v~~~~r~~ 40 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAA---GYRVAIHYHRS 40 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEcCCC
Confidence 34678999999999999999999997 68999998864
No 53
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=98.68 E-value=3.8e-08 Score=58.87 Aligned_cols=38 Identities=32% Similarity=0.424 Sum_probs=33.2
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.++++|+||||+|++|++++++|++. +++|+++.|+++
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~---g~~V~~~~R~~~ 52 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAK---GFAVKAGVRDVD 52 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhC---CCEEEEEecCHH
Confidence 45689999999999999999999997 689999988643
No 54
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=98.68 E-value=4.6e-08 Score=60.29 Aligned_cols=33 Identities=30% Similarity=0.479 Sum_probs=29.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
|+++||||+||||+++++.|+++ +++|++++|.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~~~ 33 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQN---GHDVVILDNL 33 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHC---CCeEEEEecC
Confidence 57999999999999999999997 6889988764
No 55
>PRK07806 short chain dehydrogenase; Provisional
Probab=98.68 E-value=5e-08 Score=57.74 Aligned_cols=37 Identities=22% Similarity=0.175 Sum_probs=32.7
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++||||+|+||++++++|+++ +++|++++|+.
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~---G~~V~~~~r~~ 40 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGA---GAHVVVNYRQK 40 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHC---CCEEEEEeCCc
Confidence 45689999999999999999999987 67899888864
No 56
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.68 E-value=3.3e-08 Score=65.59 Aligned_cols=36 Identities=36% Similarity=0.696 Sum_probs=30.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
|+|+||||+||||++++++|++. ..+++|++++|+.
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~-~~g~~V~~l~R~~ 36 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDR-RREATVHVLVRRQ 36 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhc-CCCCEEEEEECcc
Confidence 47999999999999999999952 1268999999964
No 57
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.68 E-value=1.1e-07 Score=55.76 Aligned_cols=38 Identities=18% Similarity=0.260 Sum_probs=32.7
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|++|+++++.|++. +++|+++.|+..
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~---G~~v~~~~~~~~ 40 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQ---GANVVINYASSE 40 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCch
Confidence 46789999999999999999999997 678888887643
No 58
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=98.68 E-value=4.5e-08 Score=57.73 Aligned_cols=38 Identities=16% Similarity=0.157 Sum_probs=33.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+.+++++||||+|++|.+++++|+++ +++|++++|+..
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~---g~~V~~~~r~~~ 41 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAAD---GAEVIVVDICGD 41 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 45789999999999999999999997 679999999743
No 59
>PRK12320 hypothetical protein; Provisional
Probab=98.67 E-value=3.9e-08 Score=66.67 Aligned_cols=34 Identities=26% Similarity=0.338 Sum_probs=30.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
|+|+||||+||||+++++.|+++ +++|++++|.+
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~---G~~Vi~ldr~~ 34 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAA---GHTVSGIAQHP 34 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC---CCEEEEEeCCh
Confidence 47999999999999999999997 68999999854
No 60
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=98.67 E-value=4.3e-08 Score=59.81 Aligned_cols=35 Identities=34% Similarity=0.590 Sum_probs=31.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
|+++||||+||+|+++++.|++. +++|++++|++.
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~---g~~V~~~~r~~~ 35 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQ---GEEVRVLVRPTS 35 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHC---CCEEEEEEecCc
Confidence 47999999999999999999987 589999999754
No 61
>PRK09186 flagellin modification protein A; Provisional
Probab=98.66 E-value=8.8e-08 Score=56.86 Aligned_cols=38 Identities=29% Similarity=0.522 Sum_probs=33.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||+++++.|++. +++|++++|+++
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~---g~~v~~~~r~~~ 39 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEA---GGIVIAADIDKE 39 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEecChH
Confidence 56789999999999999999999997 678998888654
No 62
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.66 E-value=9.5e-08 Score=56.79 Aligned_cols=38 Identities=24% Similarity=0.248 Sum_probs=33.5
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||+++++.|++. +++|++++|++.
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~---G~~v~~~~r~~~ 42 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARA---GAAVAIADLNQD 42 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC---CCeEEEEeCChH
Confidence 45789999999999999999999997 678999988763
No 63
>PRK12829 short chain dehydrogenase; Provisional
Probab=98.65 E-value=5.5e-08 Score=57.88 Aligned_cols=40 Identities=15% Similarity=0.233 Sum_probs=34.9
Q ss_pred hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
..+++++++||||+|+||++++++|+++ +++|++++|++.
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~---g~~V~~~~r~~~ 46 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEA---GARVHVCDVSEA 46 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 3467899999999999999999999987 678999998653
No 64
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=98.65 E-value=7.4e-08 Score=58.85 Aligned_cols=31 Identities=32% Similarity=0.537 Sum_probs=25.7
Q ss_pred EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
|+||||+||||++++++|++. +++++++.|+
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~---g~~~v~~~~~ 32 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDK---GITDILVVDN 32 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhC---CCceEEEecC
Confidence 799999999999999999997 5655555544
No 65
>PRK07774 short chain dehydrogenase; Provisional
Probab=98.64 E-value=6.2e-08 Score=57.32 Aligned_cols=38 Identities=21% Similarity=0.367 Sum_probs=33.7
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||.+++++|++. +++|++++|+..
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~---g~~vi~~~r~~~ 41 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALARE---GASVVVADINAE 41 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 46789999999999999999999997 689999998753
No 66
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.64 E-value=6.7e-08 Score=56.68 Aligned_cols=37 Identities=19% Similarity=0.262 Sum_probs=32.7
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.+++++||||+|++|.+++++|+++ +++|++++|++.
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~---g~~v~~~~r~~~ 40 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAAD---GAKVVIYDSNEE 40 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCChh
Confidence 4578999999999999999999987 678999998754
No 67
>PRK07890 short chain dehydrogenase; Provisional
Probab=98.64 E-value=6.2e-08 Score=57.56 Aligned_cols=38 Identities=16% Similarity=0.247 Sum_probs=33.8
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+.+++++||||+|+||++++++|+++ +++|++++|++.
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~---G~~V~~~~r~~~ 40 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARA---GADVVLAARTAE 40 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence 56789999999999999999999997 679999998653
No 68
>PRK06057 short chain dehydrogenase; Provisional
Probab=98.63 E-value=7e-08 Score=57.54 Aligned_cols=38 Identities=16% Similarity=0.156 Sum_probs=33.9
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||.+++++|+++ +++|++++|+..
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~---G~~v~~~~r~~~ 42 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAE---GATVVVGDIDPE 42 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence 67889999999999999999999997 689999988643
No 69
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=98.63 E-value=7.9e-08 Score=57.22 Aligned_cols=38 Identities=24% Similarity=0.281 Sum_probs=33.9
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||++++++|++. +++|++++|++.
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~---G~~V~~~~r~~~ 45 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQA---GAEVILNGRDPA 45 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence 57899999999999999999999997 678999988753
No 70
>PRK06179 short chain dehydrogenase; Provisional
Probab=98.62 E-value=8.8e-08 Score=57.44 Aligned_cols=37 Identities=24% Similarity=0.299 Sum_probs=32.7
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++++++||||+|+||++++++|+++ +++|++++|++.
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~---g~~V~~~~r~~~ 39 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARA---GYRVFGTSRNPA 39 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC---CCEEEEEeCChh
Confidence 4578999999999999999999997 689999999743
No 71
>PRK06180 short chain dehydrogenase; Provisional
Probab=98.62 E-value=7.1e-08 Score=58.30 Aligned_cols=37 Identities=22% Similarity=0.182 Sum_probs=32.6
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.+++++||||+|+||++++++|+++ +++|++++|++.
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~---G~~V~~~~r~~~ 39 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAA---GHRVVGTVRSEA 39 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhC---cCEEEEEeCCHH
Confidence 3578999999999999999999987 689999998643
No 72
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=98.62 E-value=8.4e-08 Score=56.77 Aligned_cols=37 Identities=22% Similarity=0.125 Sum_probs=33.2
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++||||+|+||.+++++|+++ +++|++++|+.
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~---G~~vi~~~r~~ 39 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEA---GADIVGAGRSE 39 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEcCch
Confidence 56899999999999999999999997 67999998864
No 73
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=98.61 E-value=9.7e-08 Score=56.42 Aligned_cols=38 Identities=18% Similarity=0.336 Sum_probs=33.1
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||++++++|++. +.+|++++|+..
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~---g~~v~~~~r~~~ 38 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEE---GAKVAVFDLNRE 38 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEecCCHH
Confidence 35789999999999999999999997 678999888653
No 74
>PLN00016 RNA-binding protein; Provisional
Probab=98.61 E-value=5.9e-08 Score=61.19 Aligned_cols=36 Identities=25% Similarity=0.563 Sum_probs=32.7
Q ss_pred CCeEEEE----cCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 13 DGQILVT----GGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 13 ~~~ilit----Ga~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.++|+|| ||+||||++++++|+++ +++|++++|+..
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~---G~~V~~l~R~~~ 91 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKA---GHEVTLFTRGKE 91 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHC---CCEEEEEecCCc
Confidence 4689999 99999999999999997 689999999764
No 75
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=98.61 E-value=1.7e-07 Score=57.49 Aligned_cols=39 Identities=21% Similarity=0.280 Sum_probs=35.1
Q ss_pred hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
...+++++|||||+.||..+++.|.++ +++|+++.|+.+
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~---g~~liLvaR~~~ 41 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARR---GYNLILVARRED 41 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCcHH
Confidence 356789999999999999999999998 789999999865
No 76
>PRK06914 short chain dehydrogenase; Provisional
Probab=98.61 E-value=8.7e-08 Score=57.73 Aligned_cols=37 Identities=19% Similarity=0.190 Sum_probs=32.6
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.+++++||||+|++|+++++.|+++ +++|++++|+++
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~---G~~V~~~~r~~~ 38 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKK---GYLVIATMRNPE 38 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhC---CCEEEEEeCCHH
Confidence 4578999999999999999999997 689999988754
No 77
>PRK08628 short chain dehydrogenase; Provisional
Probab=98.60 E-value=1e-07 Score=56.74 Aligned_cols=38 Identities=24% Similarity=0.302 Sum_probs=33.9
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||++++++|+++ +.+|++++|+++
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~---G~~v~~~~r~~~ 42 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEE---GAIPVIFGRSAP 42 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHc---CCcEEEEcCChh
Confidence 66889999999999999999999997 678888888765
No 78
>PRK06523 short chain dehydrogenase; Provisional
Probab=98.60 E-value=9.8e-08 Score=56.90 Aligned_cols=38 Identities=26% Similarity=0.351 Sum_probs=33.9
Q ss_pred hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.+++++++||||+|+||+++++.|.+. +++|++++|+.
T Consensus 6 ~~~~k~vlItGas~gIG~~ia~~l~~~---G~~v~~~~r~~ 43 (260)
T PRK06523 6 ELAGKRALVTGGTKGIGAATVARLLEA---GARVVTTARSR 43 (260)
T ss_pred CCCCCEEEEECCCCchhHHHHHHHHHC---CCEEEEEeCCh
Confidence 367899999999999999999999987 67899999864
No 79
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=98.59 E-value=1.2e-07 Score=56.24 Aligned_cols=41 Identities=24% Similarity=0.327 Sum_probs=35.7
Q ss_pred hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
...+++++++||||+|+||.+++++|++. +.+|++++|+..
T Consensus 7 ~~~~~~k~vlItG~~g~iG~~la~~l~~~---G~~Vi~~~r~~~ 47 (247)
T PRK08945 7 PDLLKDRIILVTGAGDGIGREAALTYARH---GATVILLGRTEE 47 (247)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHC---CCcEEEEeCCHH
Confidence 34678899999999999999999999997 579999998753
No 80
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.59 E-value=2.1e-07 Score=54.56 Aligned_cols=37 Identities=22% Similarity=0.279 Sum_probs=31.1
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++||||+|++|++++++|+++ +++|+++.|+.
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~---g~~v~~~~~~~ 40 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARA---GADVVVHYRSD 40 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC---CCeEEEEeCCC
Confidence 34579999999999999999999997 67887766654
No 81
>PRK07576 short chain dehydrogenase; Provisional
Probab=98.59 E-value=1.4e-07 Score=56.69 Aligned_cols=38 Identities=16% Similarity=0.307 Sum_probs=33.9
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||.+++++|++. +++|++++|+++
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~---G~~V~~~~r~~~ 44 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARA---GANVAVASRSQE 44 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 56889999999999999999999987 688999998743
No 82
>PRK06138 short chain dehydrogenase; Provisional
Probab=98.59 E-value=9.3e-08 Score=56.55 Aligned_cols=38 Identities=18% Similarity=0.228 Sum_probs=33.5
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||++++++|++. +++|++++|+.+
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~---G~~v~~~~r~~~ 40 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFARE---GARVVVADRDAE 40 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHC---CCeEEEecCCHH
Confidence 46789999999999999999999997 678999988743
No 83
>PRK07814 short chain dehydrogenase; Provisional
Probab=98.59 E-value=1.2e-07 Score=56.88 Aligned_cols=38 Identities=18% Similarity=0.217 Sum_probs=33.8
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||.+++++|+++ +.+|++++|+++
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~---G~~Vi~~~r~~~ 45 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEA---GADVLIAARTES 45 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 56889999999999999999999997 679999998753
No 84
>PRK12367 short chain dehydrogenase; Provisional
Probab=98.58 E-value=1.6e-07 Score=56.44 Aligned_cols=39 Identities=21% Similarity=0.320 Sum_probs=34.6
Q ss_pred hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
..+++++++||||+|+||+++++.|+++ +.+|++++|++
T Consensus 10 ~~l~~k~~lITGas~gIG~ala~~l~~~---G~~Vi~~~r~~ 48 (245)
T PRK12367 10 STWQGKRIGITGASGALGKALTKAFRAK---GAKVIGLTHSK 48 (245)
T ss_pred HhhCCCEEEEEcCCcHHHHHHHHHHHHC---CCEEEEEECCc
Confidence 4567899999999999999999999997 67999988875
No 85
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=98.58 E-value=5.9e-08 Score=59.50 Aligned_cols=34 Identities=35% Similarity=0.599 Sum_probs=29.0
Q ss_pred EEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 17 LVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 17 litGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
|||||+||+|++++++|+++.+ .++|.++++.+.
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~-~~~Vr~~d~~~~ 34 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGY-IYEVRVLDRSPP 34 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCC-ceEEEEcccccc
Confidence 6999999999999999999832 368999988654
No 86
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=98.57 E-value=1.2e-07 Score=56.77 Aligned_cols=37 Identities=19% Similarity=0.471 Sum_probs=33.2
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++||||+|+||.++++.|+++ +++|++++|+.
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~---G~~V~~~~r~~ 39 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAE---GARVAVLDKSA 39 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCH
Confidence 46789999999999999999999997 68999998864
No 87
>PRK06196 oxidoreductase; Provisional
Probab=98.57 E-value=1.5e-07 Score=57.94 Aligned_cols=38 Identities=18% Similarity=0.205 Sum_probs=33.7
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||.+++++|+++ +++|++++|+..
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~---G~~Vv~~~R~~~ 61 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQA---GAHVIVPARRPD 61 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 46789999999999999999999997 689999998753
No 88
>PRK06398 aldose dehydrogenase; Validated
Probab=98.57 E-value=1.8e-07 Score=56.08 Aligned_cols=38 Identities=21% Similarity=0.328 Sum_probs=33.7
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||+++++.|++. +++|++++|+..
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~---G~~Vi~~~r~~~ 41 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEE---GSNVINFDIKEP 41 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCeEEEEeCCcc
Confidence 56789999999999999999999997 689999998653
No 89
>PRK12827 short chain dehydrogenase; Provisional
Probab=98.57 E-value=3.1e-07 Score=54.10 Aligned_cols=36 Identities=19% Similarity=0.409 Sum_probs=31.4
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++++++||||+|+||++++++|+++ +++|++++|.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~---g~~v~~~~~~ 39 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAAD---GADVIVLDIH 39 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHC---CCeEEEEcCc
Confidence 45789999999999999999999997 6788887764
No 90
>PRK08703 short chain dehydrogenase; Provisional
Probab=98.56 E-value=1.5e-07 Score=55.54 Aligned_cols=38 Identities=24% Similarity=0.373 Sum_probs=33.8
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|++|++++++|+++ +++|++++|++.
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~---g~~V~~~~r~~~ 41 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAA---GATVILVARHQK 41 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHc---CCEEEEEeCChH
Confidence 56789999999999999999999997 678999998764
No 91
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=98.56 E-value=1.9e-07 Score=55.75 Aligned_cols=38 Identities=21% Similarity=0.286 Sum_probs=33.4
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||.++++.|++. +++|++++|+.+
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~---G~~V~~~~r~~~ 47 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEA---GARVVLSARKAE 47 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence 46789999999999999999999987 678999988643
No 92
>PRK08264 short chain dehydrogenase; Validated
Probab=98.56 E-value=1.6e-07 Score=55.30 Aligned_cols=38 Identities=26% Similarity=0.493 Sum_probs=33.2
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcc-eEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~-~v~~~~r~~~ 51 (67)
+++++++||||+|++|+++++.|+++ +. +|++++|+..
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~---G~~~V~~~~r~~~ 42 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLAR---GAAKVYAAARDPE 42 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CcccEEEEecChh
Confidence 45789999999999999999999987 56 8999998654
No 93
>PRK07856 short chain dehydrogenase; Provisional
Probab=98.56 E-value=1.6e-07 Score=55.86 Aligned_cols=37 Identities=24% Similarity=0.303 Sum_probs=33.2
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++||||+|+||+++++.|++. +++|++++|+.
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~---g~~v~~~~r~~ 40 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAA---GATVVVCGRRA 40 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCh
Confidence 56899999999999999999999997 67899998865
No 94
>PRK05875 short chain dehydrogenase; Provisional
Probab=98.55 E-value=1.6e-07 Score=56.44 Aligned_cols=38 Identities=32% Similarity=0.448 Sum_probs=33.7
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||+++++.|+++ +++|++++|++.
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~---G~~V~~~~r~~~ 42 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAA---GAAVMIVGRNPD 42 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC---CCeEEEEeCCHH
Confidence 56789999999999999999999997 679999998643
No 95
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=98.55 E-value=1.4e-07 Score=56.19 Aligned_cols=38 Identities=16% Similarity=0.207 Sum_probs=33.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+.+++++||||+|+||.++++.|+++ +++|++++|+..
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~---G~~v~~~~r~~~ 41 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAE---GARVVIADIKPA 41 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc---CCEEEEEcCCHH
Confidence 45789999999999999999999997 689999988654
No 96
>PRK07577 short chain dehydrogenase; Provisional
Probab=98.55 E-value=2.2e-07 Score=54.54 Aligned_cols=37 Identities=24% Similarity=0.186 Sum_probs=32.8
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.+++++||||+|+||++++++|+++ +++|++++|+..
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~---G~~v~~~~r~~~ 38 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANL---GHQVIGIARSAI 38 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHC---CCEEEEEeCCcc
Confidence 4678999999999999999999987 689999998654
No 97
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=98.55 E-value=2.1e-07 Score=55.39 Aligned_cols=38 Identities=18% Similarity=0.151 Sum_probs=34.0
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||+++++.|+++ +++|++++|+++
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~---G~~v~~~~r~~~ 46 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGA---GAHVLVNGRNAA 46 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHc---CCeEEEEeCCHH
Confidence 67899999999999999999999987 679999999753
No 98
>PRK06197 short chain dehydrogenase; Provisional
Probab=98.55 E-value=1.6e-07 Score=57.47 Aligned_cols=38 Identities=18% Similarity=0.142 Sum_probs=33.5
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||.+++++|+++ +++|++++|+..
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~---G~~vi~~~r~~~ 51 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAK---GAHVVLAVRNLD 51 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 56789999999999999999999997 678999888643
No 99
>PRK07063 short chain dehydrogenase; Provisional
Probab=98.55 E-value=2.3e-07 Score=55.35 Aligned_cols=38 Identities=21% Similarity=0.197 Sum_probs=33.8
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||.++++.|+++ +++|++++|+++
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~---G~~vv~~~r~~~ 42 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFARE---GAAVALADLDAA 42 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 56889999999999999999999997 678999988643
No 100
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=98.55 E-value=2.1e-07 Score=57.84 Aligned_cols=32 Identities=28% Similarity=0.691 Sum_probs=26.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcce-EEEEEe
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGA-IYIMVR 48 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~-v~~~~r 48 (67)
++|+||||+||||+++++.|+++ ++. +.+++|
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~---g~~~v~~~~~ 34 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINE---TSDAVVVVDK 34 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHc---CCCEEEEEec
Confidence 57999999999999999999997 444 444454
No 101
>PRK07326 short chain dehydrogenase; Provisional
Probab=98.54 E-value=1.7e-07 Score=55.09 Aligned_cols=38 Identities=29% Similarity=0.383 Sum_probs=33.0
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+.+++++||||+|++|++++++|+++ +.+|++++|++.
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~---g~~V~~~~r~~~ 41 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAE---GYKVAITARDQK 41 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHC---CCEEEEeeCCHH
Confidence 34689999999999999999999987 578999998753
No 102
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=98.54 E-value=1.5e-07 Score=55.69 Aligned_cols=36 Identities=17% Similarity=0.114 Sum_probs=31.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++||||+|++|++++++|+++ +++|++++|++.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~---g~~v~~~~r~~~ 36 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAA---GANVVVNDLGEA 36 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 368999999999999999999997 678999999753
No 103
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.54 E-value=1.9e-07 Score=55.10 Aligned_cols=38 Identities=16% Similarity=0.236 Sum_probs=33.4
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||.+++++|+++ +++|++++|++.
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~---G~~Vi~~~r~~~ 42 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKE---GVNVGLLARTEE 42 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 45789999999999999999999987 679999998753
No 104
>PRK08278 short chain dehydrogenase; Provisional
Probab=98.54 E-value=2.3e-07 Score=56.09 Aligned_cols=38 Identities=16% Similarity=0.233 Sum_probs=33.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||.++++.|+++ +.+|++++|+..
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~---G~~V~~~~r~~~ 41 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARD---GANIVIAAKTAE 41 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEecccc
Confidence 46789999999999999999999987 679999998754
No 105
>PRK06841 short chain dehydrogenase; Provisional
Probab=98.54 E-value=1.9e-07 Score=55.48 Aligned_cols=38 Identities=16% Similarity=0.269 Sum_probs=33.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||.++++.|+++ +++|++++|+..
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~---G~~Vi~~~r~~~ 50 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAK---GARVALLDRSED 50 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 56889999999999999999999987 678999988643
No 106
>PRK06182 short chain dehydrogenase; Validated
Probab=98.54 E-value=2e-07 Score=56.15 Aligned_cols=37 Identities=24% Similarity=0.247 Sum_probs=32.7
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++++++||||+|+||++++++|++. +++|++++|+.+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~---G~~V~~~~r~~~ 38 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQ---GYTVYGAARRVD 38 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 4679999999999999999999987 689999998743
No 107
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=98.53 E-value=2e-07 Score=62.18 Aligned_cols=39 Identities=23% Similarity=0.245 Sum_probs=34.3
Q ss_pred hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
...+++++||||+|+||++++++|++. +++|++++|+..
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~---G~~Vval~Rn~e 115 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKL---GFRVRAGVRSAQ 115 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHC---CCeEEEEeCCHH
Confidence 346789999999999999999999997 689999999754
No 108
>PRK07102 short chain dehydrogenase; Provisional
Probab=98.53 E-value=1.9e-07 Score=55.28 Aligned_cols=35 Identities=20% Similarity=0.357 Sum_probs=31.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
|+++||||+|+||.++++.|++. +++|++++|+++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~---G~~Vi~~~r~~~ 36 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAA---GARLYLAARDVE 36 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhc---CCEEEEEeCCHH
Confidence 58999999999999999999987 679999999754
No 109
>PRK06482 short chain dehydrogenase; Provisional
Probab=98.53 E-value=2.2e-07 Score=55.90 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=30.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
++++||||+|+||++++++|+++ +++|++++|++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~---g~~v~~~~r~~ 36 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLAR---GDRVAATVRRP 36 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence 57999999999999999999997 67899988864
No 110
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.53 E-value=2.1e-07 Score=54.68 Aligned_cols=38 Identities=13% Similarity=0.188 Sum_probs=33.4
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||.++++.|++. +.+|++++|++.
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~---G~~V~~~~r~~~ 40 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKE---GAQVCINSRNEN 40 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 45789999999999999999999987 679999998653
No 111
>PRK06500 short chain dehydrogenase; Provisional
Probab=98.53 E-value=2.1e-07 Score=54.94 Aligned_cols=37 Identities=27% Similarity=0.310 Sum_probs=32.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++||||+|+||++++++|+++ +++|++++|+.
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~---g~~v~~~~r~~ 40 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAE---GARVAITGRDP 40 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEecCCH
Confidence 45789999999999999999999997 57898888863
No 112
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.53 E-value=1.8e-07 Score=58.38 Aligned_cols=34 Identities=35% Similarity=0.674 Sum_probs=29.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 48 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r 48 (67)
|++|||||+||||++++++++...++ .+|+++++
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d-~~v~~~Dk 34 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPD-DHVVNLDK 34 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCC-ceEEEEec
Confidence 57999999999999999999998665 57888887
No 113
>PRK08226 short chain dehydrogenase; Provisional
Probab=98.53 E-value=1.6e-07 Score=56.04 Aligned_cols=37 Identities=14% Similarity=0.150 Sum_probs=33.0
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+.+++++||||+|+||+++++.|+++ +++|++++|+.
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~---G~~Vv~~~r~~ 40 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARH---GANLILLDISP 40 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEecCCH
Confidence 45789999999999999999999997 67899998874
No 114
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.53 E-value=1.9e-07 Score=62.01 Aligned_cols=45 Identities=27% Similarity=0.406 Sum_probs=39.0
Q ss_pred chhhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490 6 KVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG 52 (67)
Q Consensus 6 ~~~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~ 52 (67)
.+..++++|+|+||||+|-||+.+|+++++.+ ..+|++++|++.+
T Consensus 243 ~i~~~~~gK~vLVTGagGSiGsel~~qil~~~--p~~i~l~~~~E~~ 287 (588)
T COG1086 243 LIGAMLTGKTVLVTGGGGSIGSELCRQILKFN--PKEIILFSRDEYK 287 (588)
T ss_pred HHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcC--CCEEEEecCchHH
Confidence 45567899999999999999999999999984 4689999998653
No 115
>PRK06949 short chain dehydrogenase; Provisional
Probab=98.53 E-value=2.6e-07 Score=54.88 Aligned_cols=38 Identities=18% Similarity=0.230 Sum_probs=33.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||+++++.|++. +.+|++++|+++
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~---G~~Vi~~~r~~~ 44 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQA---GAKVVLASRRVE 44 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 56789999999999999999999987 578999998754
No 116
>PRK09072 short chain dehydrogenase; Provisional
Probab=98.53 E-value=2.5e-07 Score=55.33 Aligned_cols=38 Identities=24% Similarity=0.478 Sum_probs=33.4
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||.+++++|+++ +++|++++|++.
T Consensus 3 ~~~~~vlItG~s~~iG~~ia~~l~~~---G~~V~~~~r~~~ 40 (263)
T PRK09072 3 LKDKRVLLTGASGGIGQALAEALAAA---GARLLLVGRNAE 40 (263)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEECCHH
Confidence 35789999999999999999999997 689999998743
No 117
>PRK12939 short chain dehydrogenase; Provisional
Probab=98.52 E-value=2e-07 Score=55.03 Aligned_cols=38 Identities=16% Similarity=0.122 Sum_probs=33.3
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||+++++.|+++ +++|++++|++.
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~---G~~v~~~~r~~~ 42 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEA---GATVAFNDGLAA 42 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence 56789999999999999999999997 678988888643
No 118
>PRK06172 short chain dehydrogenase; Provisional
Probab=98.52 E-value=1.9e-07 Score=55.50 Aligned_cols=38 Identities=24% Similarity=0.318 Sum_probs=33.9
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||++++++|+++ +.+|++++|+++
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~---G~~v~~~~r~~~ 42 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFARE---GAKVVVADRDAA 42 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence 56789999999999999999999987 678999998754
No 119
>PRK05854 short chain dehydrogenase; Provisional
Probab=98.52 E-value=2.9e-07 Score=56.88 Aligned_cols=38 Identities=21% Similarity=0.299 Sum_probs=34.1
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+++||.++++.|+++ +.+|+++.|+.+
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~---G~~Vil~~R~~~ 49 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAA---GAEVILPVRNRA 49 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 57899999999999999999999997 689999998754
No 120
>PRK05866 short chain dehydrogenase; Provisional
Probab=98.52 E-value=2.7e-07 Score=56.54 Aligned_cols=38 Identities=18% Similarity=0.340 Sum_probs=33.7
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||.++++.|++. +++|++++|+.+
T Consensus 38 ~~~k~vlItGasggIG~~la~~La~~---G~~Vi~~~R~~~ 75 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAAAEQFARR---GATVVAVARRED 75 (293)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence 56789999999999999999999987 689999999753
No 121
>PRK07023 short chain dehydrogenase; Provisional
Probab=98.52 E-value=2.4e-07 Score=54.80 Aligned_cols=35 Identities=26% Similarity=0.324 Sum_probs=30.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++++||||+|+||++++++|++. +++|++++|+..
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~---G~~v~~~~r~~~ 36 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQP---GIAVLGVARSRH 36 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhC---CCEEEEEecCcc
Confidence 57999999999999999999987 678999888643
No 122
>PRK08263 short chain dehydrogenase; Provisional
Probab=98.51 E-value=2.6e-07 Score=55.76 Aligned_cols=36 Identities=17% Similarity=0.250 Sum_probs=31.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++||||+|+||++++++|+++ +++|++++|+++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~---g~~V~~~~r~~~ 38 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALER---GDRVVATARDTA 38 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEECCHH
Confidence 578999999999999999999987 678999998743
No 123
>PRK07825 short chain dehydrogenase; Provisional
Probab=98.51 E-value=2.3e-07 Score=55.78 Aligned_cols=38 Identities=21% Similarity=0.156 Sum_probs=32.9
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||+++++.|+++ +++|++++|+++
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~---G~~v~~~~r~~~ 40 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAAL---GARVAIGDLDEA 40 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEECCHH
Confidence 45689999999999999999999987 678988888643
No 124
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.51 E-value=2.5e-07 Score=55.20 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=32.8
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++++++||||+|+||.++++.|++. +++|++++|+
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~---G~~v~~~~~~ 48 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKA---GADIIITTHG 48 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCC
Confidence 56899999999999999999999997 6889988886
No 125
>PRK07035 short chain dehydrogenase; Provisional
Probab=98.51 E-value=3.1e-07 Score=54.55 Aligned_cols=38 Identities=18% Similarity=0.215 Sum_probs=33.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||.+++++|++. +++|++++|+..
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~---G~~Vi~~~r~~~ 43 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQ---GAHVIVSSRKLD 43 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 56789999999999999999999997 679999998643
No 126
>PRK06114 short chain dehydrogenase; Provisional
Probab=98.50 E-value=6.9e-07 Score=53.30 Aligned_cols=38 Identities=13% Similarity=0.114 Sum_probs=33.7
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||+++++.|++. +++|++++|+.+
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~---G~~v~~~~r~~~ 43 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQA---GADVALFDLRTD 43 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCcc
Confidence 56889999999999999999999997 679999998653
No 127
>PRK08265 short chain dehydrogenase; Provisional
Probab=98.50 E-value=2.6e-07 Score=55.40 Aligned_cols=38 Identities=21% Similarity=0.308 Sum_probs=33.7
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||+++++.|+++ +++|++++|+..
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~---G~~V~~~~r~~~ 41 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAA---GARVAIVDIDAD 41 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 46789999999999999999999997 679999998753
No 128
>PRK06128 oxidoreductase; Provisional
Probab=98.50 E-value=4.1e-07 Score=55.69 Aligned_cols=37 Identities=16% Similarity=0.169 Sum_probs=31.7
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++||||+|+||+++++.|++. +.+|++..++.
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~---G~~V~i~~~~~ 89 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFARE---GADIALNYLPE 89 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHc---CCEEEEEeCCc
Confidence 56789999999999999999999997 67887776653
No 129
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=98.50 E-value=2.9e-07 Score=55.08 Aligned_cols=37 Identities=22% Similarity=0.434 Sum_probs=33.2
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++||||+|+||.++++.|+++ +++|++++|++
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~---G~~V~~~~r~~ 40 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAE---GARVAVLERSA 40 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence 46789999999999999999999997 67899999864
No 130
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=98.50 E-value=4.1e-07 Score=54.47 Aligned_cols=38 Identities=21% Similarity=0.265 Sum_probs=33.5
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||+++++.|+++ +++|+++++++.
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~---G~~v~~~~~~~~ 44 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLAN---GANVVNADIHGG 44 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEeCCcc
Confidence 56889999999999999999999997 688988888653
No 131
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=98.50 E-value=2.7e-07 Score=54.90 Aligned_cols=35 Identities=20% Similarity=0.287 Sum_probs=31.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
|+++||||+|++|.++++.|+++ +++|++++|++.
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~---G~~V~~~~r~~~ 35 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQ---GHKVIATGRRQE 35 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHC---CCEEEEEECCHH
Confidence 57999999999999999999987 679999998753
No 132
>PLN02253 xanthoxin dehydrogenase
Probab=98.50 E-value=3.3e-07 Score=55.26 Aligned_cols=38 Identities=18% Similarity=0.204 Sum_probs=33.4
Q ss_pred hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.+++++++||||+|+||++++++|++. +++|++++|..
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~---G~~v~~~~~~~ 52 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKH---GAKVCIVDLQD 52 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHc---CCEEEEEeCCH
Confidence 356789999999999999999999997 68999988764
No 133
>PRK09291 short chain dehydrogenase; Provisional
Probab=98.49 E-value=3.3e-07 Score=54.43 Aligned_cols=35 Identities=23% Similarity=0.213 Sum_probs=31.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++||||+|+||++++++|++. +++|++++|++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~---G~~v~~~~r~~ 36 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARK---GHNVIAGVQIA 36 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence 358999999999999999999997 67999998864
No 134
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.49 E-value=3.4e-07 Score=54.36 Aligned_cols=34 Identities=26% Similarity=0.139 Sum_probs=30.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
++++||||+|+||++++++|+++ +.+|++++|..
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~---g~~vi~~~r~~ 36 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAA---GFDLAINDRPD 36 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHC---CCEEEEEecCc
Confidence 67999999999999999999997 57899988864
No 135
>PRK06701 short chain dehydrogenase; Provisional
Probab=98.49 E-value=7.2e-07 Score=54.55 Aligned_cols=39 Identities=21% Similarity=0.264 Sum_probs=33.9
Q ss_pred hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.+++++++||||+|+||.+++++|++. +.+|++++|+..
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~---G~~V~l~~r~~~ 81 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKE---GADIAIVYLDEH 81 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCcc
Confidence 456789999999999999999999997 678988888653
No 136
>PRK05867 short chain dehydrogenase; Provisional
Probab=98.49 E-value=2.5e-07 Score=55.06 Aligned_cols=38 Identities=18% Similarity=0.228 Sum_probs=33.7
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||.++++.|+++ +++|++++|+..
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~---G~~V~~~~r~~~ 44 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEA---GAQVAIAARHLD 44 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEcCCHH
Confidence 56889999999999999999999997 678999888643
No 137
>PRK07478 short chain dehydrogenase; Provisional
Probab=98.49 E-value=2.7e-07 Score=54.92 Aligned_cols=38 Identities=13% Similarity=0.218 Sum_probs=33.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||.++++.|++. +++|++++|+++
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~---G~~v~~~~r~~~ 41 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFARE---GAKVVVGARRQA 41 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 46789999999999999999999997 678999998754
No 138
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=98.49 E-value=3.5e-07 Score=56.43 Aligned_cols=38 Identities=18% Similarity=0.277 Sum_probs=33.1
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
..+++++||||+|+||.++++.|+++ +++|++++|+..
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~---G~~V~~~~r~~~ 41 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKR---GWHVIMACRNLK 41 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHC---CCEEEEEECCHH
Confidence 35789999999999999999999997 678999988643
No 139
>PRK05993 short chain dehydrogenase; Provisional
Probab=98.49 E-value=2.8e-07 Score=55.76 Aligned_cols=36 Identities=19% Similarity=0.264 Sum_probs=32.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++||||+|+||+++++.|.+. +++|++++|+++
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~---G~~Vi~~~r~~~ 39 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSD---GWRVFATCRKEE 39 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence 568999999999999999999987 689999998753
No 140
>PRK07062 short chain dehydrogenase; Provisional
Probab=98.48 E-value=3.1e-07 Score=54.97 Aligned_cols=38 Identities=26% Similarity=0.371 Sum_probs=34.1
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||.++++.|+++ +++|++++|+++
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~~~---G~~V~~~~r~~~ 43 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLLEA---GASVAICGRDEE 43 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC---CCeEEEEeCCHH
Confidence 56889999999999999999999997 678999999754
No 141
>PRK07060 short chain dehydrogenase; Provisional
Probab=98.48 E-value=4.2e-07 Score=53.56 Aligned_cols=37 Identities=19% Similarity=0.294 Sum_probs=33.2
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++||||+|++|+++++.|+++ +++|++++|++
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~---g~~V~~~~r~~ 43 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQR---GARVVAAARNA 43 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence 56789999999999999999999997 67899999865
No 142
>PRK06101 short chain dehydrogenase; Provisional
Probab=98.48 E-value=3.7e-07 Score=54.11 Aligned_cols=34 Identities=24% Similarity=0.251 Sum_probs=30.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
++++||||+|+||.+++++|+++ +++|++++|++
T Consensus 2 ~~vlItGas~giG~~la~~L~~~---G~~V~~~~r~~ 35 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQ---GWQVIACGRNQ 35 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhC---CCEEEEEECCH
Confidence 57999999999999999999997 67899999864
No 143
>PRK08589 short chain dehydrogenase; Validated
Probab=98.47 E-value=4.1e-07 Score=54.91 Aligned_cols=36 Identities=11% Similarity=0.075 Sum_probs=32.9
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++++++||||+++||+++++.|++. +++|++++|+
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~---G~~vi~~~r~ 39 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQE---GAYVLAVDIA 39 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCc
Confidence 46789999999999999999999997 6899999887
No 144
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=98.47 E-value=3.1e-07 Score=54.63 Aligned_cols=38 Identities=26% Similarity=0.211 Sum_probs=33.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+.+++++||||+|+||.+++++|+++ +++|++.+|+..
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~---G~~vvl~~r~~~ 44 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEY---GAEIIINDITAE 44 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHc---CCEEEEEcCCHH
Confidence 46889999999999999999999997 679999888743
No 145
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=98.47 E-value=4e-07 Score=53.93 Aligned_cols=37 Identities=11% Similarity=0.106 Sum_probs=33.1
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++||||+|+||++++++|+++ +++|++++|+.
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~---G~~v~~~~~~~ 42 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEA---GAKVIGFDQAF 42 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEecch
Confidence 56789999999999999999999997 67899988865
No 146
>PRK05876 short chain dehydrogenase; Provisional
Probab=98.47 E-value=4.1e-07 Score=55.23 Aligned_cols=38 Identities=18% Similarity=0.208 Sum_probs=33.4
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||+++++.|++. +.+|++.+|+.+
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~---G~~Vv~~~r~~~ 41 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARR---GARVVLGDVDKP 41 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 56789999999999999999999997 678988888643
No 147
>PRK08177 short chain dehydrogenase; Provisional
Probab=98.47 E-value=5.1e-07 Score=53.00 Aligned_cols=36 Identities=25% Similarity=0.297 Sum_probs=32.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG 52 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~ 52 (67)
++++||||+|++|++++++|++. +++|++++|++..
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~---G~~V~~~~r~~~~ 37 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLER---GWQVTATVRGPQQ 37 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhC---CCEEEEEeCCCcc
Confidence 57999999999999999999987 6799999998653
No 148
>PRK07904 short chain dehydrogenase; Provisional
Probab=98.46 E-value=4.9e-07 Score=54.23 Aligned_cols=38 Identities=18% Similarity=0.327 Sum_probs=33.0
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++++++||||+|+||++++++|+++. +.+|++++|+++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~g--g~~V~~~~r~~~ 44 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNA--PARVVLAALPDD 44 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcC--CCeEEEEeCCcc
Confidence 46789999999999999999999972 379999999765
No 149
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.46 E-value=4.6e-07 Score=53.22 Aligned_cols=38 Identities=18% Similarity=0.303 Sum_probs=33.3
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||+++++.|++. +++|++++|+..
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~---G~~v~~~~r~~~ 40 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQ---GAQVYGVDKQDK 40 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHC---CCEEEEEeCCcc
Confidence 56789999999999999999999987 678999888643
No 150
>PRK08267 short chain dehydrogenase; Provisional
Probab=98.46 E-value=3.4e-07 Score=54.64 Aligned_cols=35 Identities=11% Similarity=0.032 Sum_probs=31.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++++||||+|+||++++++|+++ +.+|++++|+++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~---G~~V~~~~r~~~ 36 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAE---GWRVGAYDINEA 36 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHC---CCeEEEEeCCHH
Confidence 57999999999999999999997 679999988654
No 151
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.46 E-value=4.8e-07 Score=53.53 Aligned_cols=36 Identities=17% Similarity=0.319 Sum_probs=30.4
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++++++||||+|+||++++++|+++ +++|++..|+
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~---g~~v~~~~~~ 39 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKE---GSLVVVNAKK 39 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHC---CCEEEEEeCC
Confidence 35689999999999999999999987 5777776654
No 152
>PRK07454 short chain dehydrogenase; Provisional
Probab=98.46 E-value=3.9e-07 Score=53.80 Aligned_cols=37 Identities=16% Similarity=0.200 Sum_probs=32.7
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++++++||||+|++|+.++++|+++ +.+|++++|++.
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~---G~~V~~~~r~~~ 41 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKA---GWDLALVARSQD 41 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 4578999999999999999999997 679999999753
No 153
>KOG1371|consensus
Probab=98.45 E-value=4.3e-07 Score=57.05 Aligned_cols=49 Identities=27% Similarity=0.405 Sum_probs=36.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC-CCCCChHHHHHHHhh
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD-KKGSSPEERVKNMLN 64 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~-~~~~~~~~~~~~~~~ 64 (67)
.++||||||+||||+|.+-+|++. ++.|.++|.= ........+++.+..
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~---gy~v~~vDNl~n~~~~sl~r~~~l~~ 51 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKR---GYGVVIVDNLNNSYLESLKRVRQLLG 51 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhC---CCcEEEEecccccchhHHHHHHHhcC
Confidence 468999999999999999999998 6788888863 222344555555543
No 154
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.45 E-value=4.8e-07 Score=53.55 Aligned_cols=36 Identities=19% Similarity=0.333 Sum_probs=30.3
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++++++||||+|+||+++++.|+++ +++|++..++
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~---G~~vv~~~~~ 38 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFARE---GARVVVNYHQ 38 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHC---CCeEEEEcCC
Confidence 45689999999999999999999987 5777776543
No 155
>PRK08251 short chain dehydrogenase; Provisional
Probab=98.45 E-value=4.6e-07 Score=53.61 Aligned_cols=36 Identities=17% Similarity=0.253 Sum_probs=31.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++||||+|+||++++++|+++ +.+|++++|++.
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~---g~~v~~~~r~~~ 37 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAK---GRDLALCARRTD 37 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence 568999999999999999999987 578999888753
No 156
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.44 E-value=3.7e-07 Score=53.68 Aligned_cols=38 Identities=18% Similarity=0.289 Sum_probs=32.1
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEE-EeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-VRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~-~r~~~ 51 (67)
+.+++++||||+|+||.++++.|++. +++|+++ +|++.
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~---g~~v~~~~~r~~~ 41 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKE---GAKVVIAYDINEE 41 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEcCCCHH
Confidence 45679999999999999999999987 5788887 77643
No 157
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=98.44 E-value=3.1e-07 Score=57.00 Aligned_cols=33 Identities=27% Similarity=0.576 Sum_probs=26.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 48 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r 48 (67)
|+|+||||+||||+++++.|++.+ ...|+.+++
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g--~~~v~~~~~ 33 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNT--QDSVVNVDK 33 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhC--CCeEEEecC
Confidence 479999999999999999999972 224555554
No 158
>PRK05693 short chain dehydrogenase; Provisional
Probab=98.44 E-value=4.4e-07 Score=54.65 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=30.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
|+++||||+|+||+++++.|++. +++|++++|+.
T Consensus 2 k~vlItGasggiG~~la~~l~~~---G~~V~~~~r~~ 35 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAA---GYEVWATARKA 35 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHC---CCEEEEEeCCH
Confidence 57999999999999999999987 68999999864
No 159
>PRK06924 short chain dehydrogenase; Provisional
Probab=98.44 E-value=5.2e-07 Score=53.46 Aligned_cols=34 Identities=18% Similarity=0.343 Sum_probs=30.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
++++||||+|+||++++++|+++ +++|++++|.+
T Consensus 2 k~vlItGasggiG~~ia~~l~~~---g~~V~~~~r~~ 35 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEK---GTHVISISRTE 35 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhc---CCEEEEEeCCc
Confidence 57999999999999999999997 57899999875
No 160
>PRK07985 oxidoreductase; Provisional
Probab=98.44 E-value=8.9e-07 Score=54.25 Aligned_cols=37 Identities=24% Similarity=0.245 Sum_probs=32.2
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++||||+|+||.++++.|+++ +++|++..|+.
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~---G~~Vi~~~~~~ 83 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYARE---GADVAISYLPV 83 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHC---CCEEEEecCCc
Confidence 56789999999999999999999997 67888877653
No 161
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=98.43 E-value=3.1e-07 Score=55.92 Aligned_cols=32 Identities=34% Similarity=0.524 Sum_probs=27.4
Q ss_pred EEEEcCCChHHHHHHHHHHhhCCCcc-eEEEEEeCC
Q psy17490 16 ILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDK 50 (67)
Q Consensus 16 ilitGa~G~iG~~l~~~l~~~~~~~~-~v~~~~r~~ 50 (67)
|+||||+||||+++++.|++. ++ .|++++|..
T Consensus 1 ilItGatG~iG~~l~~~L~~~---g~~~v~~~~~~~ 33 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNER---GITDILVVDNLR 33 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHc---CCceEEEEecCC
Confidence 689999999999999999997 45 688887654
No 162
>PRK07074 short chain dehydrogenase; Provisional
Probab=98.43 E-value=4.8e-07 Score=53.87 Aligned_cols=36 Identities=25% Similarity=0.352 Sum_probs=31.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++||||+|+||+++++.|+++ +++|++++|++.
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~---g~~v~~~~r~~~ 37 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAA---GDRVLALDIDAA 37 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 468999999999999999999987 678999998643
No 163
>PRK08643 acetoin reductase; Validated
Probab=98.43 E-value=4.6e-07 Score=53.91 Aligned_cols=36 Identities=19% Similarity=0.183 Sum_probs=31.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++||||+|+||.++++.|+++ +.+|++++|+.+
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~---G~~v~~~~r~~~ 37 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVED---GFKVAIVDYNEE 37 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 578999999999999999999987 678999988753
No 164
>PRK07024 short chain dehydrogenase; Provisional
Probab=98.43 E-value=6.1e-07 Score=53.60 Aligned_cols=35 Identities=17% Similarity=0.311 Sum_probs=31.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.++++||||+|+||+++++.|++. +.+|++++|++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~---G~~v~~~~r~~ 36 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQ---GATLGLVARRT 36 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence 368999999999999999999987 67899999864
No 165
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.43 E-value=5.4e-07 Score=53.70 Aligned_cols=36 Identities=22% Similarity=0.478 Sum_probs=31.4
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++++++||||+|+||.++++.|.+. +++|+++.++
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~---G~~v~~~~~~ 40 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLRE---GAKVAVLYNS 40 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEeCC
Confidence 56789999999999999999999997 6788877664
No 166
>PRK12746 short chain dehydrogenase; Provisional
Probab=98.43 E-value=6.1e-07 Score=53.26 Aligned_cols=36 Identities=22% Similarity=0.248 Sum_probs=30.0
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEE-EeC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-VRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~-~r~ 49 (67)
+++++++||||+|+||++++++|+++ +++|.++ .|+
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~---G~~v~i~~~r~ 40 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLAND---GALVAIHYGRN 40 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEcCCC
Confidence 45689999999999999999999997 5777664 454
No 167
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=98.42 E-value=5.2e-07 Score=53.08 Aligned_cols=37 Identities=19% Similarity=0.169 Sum_probs=31.2
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++||||+|+||+++++.|+++ +..|++.+|+.
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~---g~~v~~~~~~~ 40 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQ---GAIVGLHGTRV 40 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEcCCH
Confidence 35789999999999999999999997 56777776653
No 168
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=98.42 E-value=5.6e-07 Score=53.61 Aligned_cols=36 Identities=17% Similarity=0.200 Sum_probs=31.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++||||+|+||.++++.|++. +++|++++|+..
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~---g~~vi~~~r~~~ 37 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEE---GYRVAVADINSE 37 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence 468999999999999999999997 678999988653
No 169
>PRK08339 short chain dehydrogenase; Provisional
Probab=98.42 E-value=6.5e-07 Score=53.93 Aligned_cols=38 Identities=13% Similarity=0.160 Sum_probs=33.9
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|.||+++++.|++. +++|++++|+..
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~---G~~V~~~~r~~~ 43 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARA---GADVILLSRNEE 43 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 56889999999999999999999997 679999998643
No 170
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=98.42 E-value=5.1e-07 Score=58.12 Aligned_cols=38 Identities=18% Similarity=0.411 Sum_probs=33.4
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||++++++|.++ +.+|++++|+++
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~---G~~Vi~l~r~~~ 213 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQ---GAKVVALTSNSD 213 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 46789999999999999999999987 679999988643
No 171
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=98.41 E-value=4.8e-07 Score=53.25 Aligned_cols=38 Identities=18% Similarity=0.322 Sum_probs=34.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS 54 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~ 54 (67)
|+|.|+||+|.+|++++++.+++ +|+|+++.|+++...
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~R---GHeVTAivRn~~K~~ 38 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKR---GHEVTAIVRNASKLA 38 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhC---CCeeEEEEeChHhcc
Confidence 68999999999999999999998 799999999877543
No 172
>PRK12747 short chain dehydrogenase; Provisional
Probab=98.41 E-value=6.7e-07 Score=53.15 Aligned_cols=35 Identities=20% Similarity=0.263 Sum_probs=30.2
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 48 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r 48 (67)
+++++++||||+|+||.++++.|++. +++|++..+
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~---G~~v~~~~~ 36 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLAND---GALVAIHYG 36 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC---CCeEEEEcC
Confidence 46789999999999999999999987 678877653
No 173
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=98.41 E-value=6.8e-07 Score=53.88 Aligned_cols=37 Identities=24% Similarity=0.486 Sum_probs=33.2
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++||||+|+||+++++.|++. +++|++++|+.
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~---G~~V~~~~r~~ 44 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARA---GAKVAILDRNQ 44 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence 56789999999999999999999987 67899999864
No 174
>PRK08017 oxidoreductase; Provisional
Probab=98.41 E-value=6.1e-07 Score=53.25 Aligned_cols=35 Identities=20% Similarity=0.159 Sum_probs=30.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++++||||+|+||.++++.|+++ +++|++++|+.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~---g~~v~~~~r~~~ 37 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRR---GYRVLAACRKPD 37 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 57999999999999999999987 578999888754
No 175
>PRK12742 oxidoreductase; Provisional
Probab=98.41 E-value=7.4e-07 Score=52.35 Aligned_cols=36 Identities=14% Similarity=0.361 Sum_probs=30.7
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++++++||||+|+||+++++.|+++ +.+|+++.++
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~---G~~v~~~~~~ 39 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTD---GANVRFTYAG 39 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEecCC
Confidence 46789999999999999999999997 5678776653
No 176
>PRK07775 short chain dehydrogenase; Provisional
Probab=98.41 E-value=7.7e-07 Score=53.79 Aligned_cols=37 Identities=16% Similarity=0.055 Sum_probs=31.9
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
...++++||||+|+||++++++|+++ +++|++++|+.
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~---G~~V~~~~r~~ 44 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAA---GFPVALGARRV 44 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence 34578999999999999999999987 67888888864
No 177
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=98.41 E-value=4.4e-07 Score=55.02 Aligned_cols=34 Identities=32% Similarity=0.660 Sum_probs=27.9
Q ss_pred eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+|+||||+||||++++++|++.++ ..+|++++|.
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~-~~~v~~~~~~ 34 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHP-DAEVIVLDKL 34 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCC-CCEEEEecCC
Confidence 489999999999999999998721 2578888763
No 178
>PRK12937 short chain dehydrogenase; Provisional
Probab=98.40 E-value=6.7e-07 Score=52.68 Aligned_cols=36 Identities=17% Similarity=0.161 Sum_probs=30.9
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++++++||||+|+||+++++.|+++ +++|+++.|+
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~---g~~v~~~~~~ 38 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAAD---GFAVAVNYAG 38 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEecCC
Confidence 46789999999999999999999997 5677776664
No 179
>PRK06181 short chain dehydrogenase; Provisional
Probab=98.40 E-value=6.5e-07 Score=53.45 Aligned_cols=36 Identities=19% Similarity=0.387 Sum_probs=31.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++||||+|+||.++++.|++. +++|++++|++.
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~---g~~Vi~~~r~~~ 36 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARA---GAQLVLAARNET 36 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 357999999999999999999987 578999998743
No 180
>PRK06483 dihydromonapterin reductase; Provisional
Probab=98.39 E-value=8.5e-07 Score=52.26 Aligned_cols=36 Identities=25% Similarity=0.261 Sum_probs=31.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++||||+|+||+++++.|+++ +++|++++|++.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~---G~~V~~~~r~~~ 37 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQ---GQPVIVSYRTHY 37 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHC---CCeEEEEeCCch
Confidence 468999999999999999999987 679999998754
No 181
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=98.39 E-value=7.5e-07 Score=53.09 Aligned_cols=37 Identities=11% Similarity=0.110 Sum_probs=32.7
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++||||+|+||.++++.|.++ +.+|++++|+.
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~---G~~vv~~~r~~ 45 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATA---GASVVVSDINA 45 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC---CCeEEEEeCCH
Confidence 56899999999999999999999997 67888888764
No 182
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.38 E-value=8.7e-07 Score=53.08 Aligned_cols=36 Identities=19% Similarity=0.315 Sum_probs=31.5
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++++++||||+++||+++++.|++. +.+|+++.|+
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~---G~~v~~~~~~ 41 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQS---GVNIAFTYNS 41 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEcCC
Confidence 67899999999999999999999997 6788777654
No 183
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.38 E-value=8e-07 Score=53.11 Aligned_cols=37 Identities=14% Similarity=0.054 Sum_probs=32.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++||||++.||+++++.|++. +.+|++++|+.
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~---G~~vv~~~~~~ 42 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKA---GADIVGVGVAE 42 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEecCch
Confidence 56889999999999999999999997 67888887753
No 184
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=98.37 E-value=1.7e-06 Score=51.14 Aligned_cols=36 Identities=22% Similarity=0.250 Sum_probs=30.2
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++++++||||+|+||++++++|+++ +.+|+++.+.
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~---g~~v~~~~~~ 39 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQE---GAKVVINYNS 39 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc---CCEEEEEcCC
Confidence 45789999999999999999999987 5777765543
No 185
>PRK05865 hypothetical protein; Provisional
Probab=98.37 E-value=7.4e-07 Score=61.69 Aligned_cols=34 Identities=29% Similarity=0.447 Sum_probs=30.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
|+|+||||+||||++++++|+++ +++|++++|+.
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~---G~~Vv~l~R~~ 34 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQ---GHEVVGIARHR 34 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHC---cCEEEEEECCc
Confidence 57999999999999999999997 68999999863
No 186
>PRK06198 short chain dehydrogenase; Provisional
Probab=98.36 E-value=6.5e-07 Score=53.29 Aligned_cols=38 Identities=26% Similarity=0.295 Sum_probs=33.0
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcce-EEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGA-IYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~-v~~~~r~~~ 51 (67)
+++++++||||+|+||++++++|++. +.+ |++++|++.
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~---G~~~V~~~~r~~~ 42 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAER---GAAGLVICGRNAE 42 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHC---CCCeEEEEcCCHH
Confidence 57889999999999999999999987 566 889888643
No 187
>PRK12744 short chain dehydrogenase; Provisional
Probab=98.36 E-value=1.7e-06 Score=51.65 Aligned_cols=36 Identities=17% Similarity=0.291 Sum_probs=30.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++++++||||+|+||.++++.|++. +.+|+++.++
T Consensus 6 l~~k~vlItGa~~gIG~~~a~~l~~~---G~~vv~i~~~ 41 (257)
T PRK12744 6 LKGKVVLIAGGAKNLGGLIARDLAAQ---GAKAVAIHYN 41 (257)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHC---CCcEEEEecC
Confidence 46789999999999999999999987 5676676654
No 188
>PRK09242 tropinone reductase; Provisional
Probab=98.35 E-value=1.2e-06 Score=52.16 Aligned_cols=38 Identities=21% Similarity=0.313 Sum_probs=33.7
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|.||+++++.|.+. +++|++++|+.+
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~---G~~v~~~~r~~~ 44 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGL---GADVLIVARDAD 44 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence 56899999999999999999999997 678999998653
No 189
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=98.35 E-value=2.1e-06 Score=51.34 Aligned_cols=37 Identities=16% Similarity=0.329 Sum_probs=32.0
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++||||+|+||.++++.|+++ ++.|++..|+.
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~---G~~vvi~~~~~ 41 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKE---KAKVVINYRSD 41 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEeCCC
Confidence 57899999999999999999999997 57787777743
No 190
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.35 E-value=8.8e-07 Score=52.40 Aligned_cols=36 Identities=25% Similarity=0.281 Sum_probs=29.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEE-EEeC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYI-MVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~-~~r~ 49 (67)
+.+++++||||+|+||++++++|++. +++|++ ..|+
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~---g~~v~~~~~r~ 38 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEE---GYDIAVNYARS 38 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEcCCC
Confidence 35679999999999999999999997 567665 3554
No 191
>PRK08219 short chain dehydrogenase; Provisional
Probab=98.35 E-value=1.2e-06 Score=51.10 Aligned_cols=35 Identities=17% Similarity=0.248 Sum_probs=30.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.|+++||||+|++|+++++.|+++ ++|++++|+..
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~----~~V~~~~r~~~ 37 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT----HTLLLGGRPAE 37 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh----CCEEEEeCCHH
Confidence 468999999999999999999875 57999998753
No 192
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.35 E-value=2.5e-06 Score=52.52 Aligned_cols=38 Identities=16% Similarity=0.043 Sum_probs=33.3
Q ss_pred hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
..+++++++||||+|+||++++++|+++ +.+|++.++.
T Consensus 8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~---Ga~Vv~~~~~ 45 (306)
T PRK07792 8 TDLSGKVAVVTGAAAGLGRAEALGLARL---GATVVVNDVA 45 (306)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEecCC
Confidence 3467899999999999999999999997 6788888775
No 193
>PRK05872 short chain dehydrogenase; Provisional
Probab=98.34 E-value=1.3e-06 Score=53.44 Aligned_cols=38 Identities=16% Similarity=0.186 Sum_probs=33.7
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|.||.++++.|.+. +++|++++|+..
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~---G~~V~~~~r~~~ 44 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHAR---GAKLALVDLEEA 44 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 57889999999999999999999987 678999998643
No 194
>PRK09134 short chain dehydrogenase; Provisional
Probab=98.34 E-value=1.4e-06 Score=52.06 Aligned_cols=36 Identities=17% Similarity=0.100 Sum_probs=30.5
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
..+++++||||+|+||+++++.|++. +++|+++.+.
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~---g~~v~~~~~~ 42 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAH---GFDVAVHYNR 42 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCC
Confidence 35679999999999999999999987 5788776664
No 195
>PRK07109 short chain dehydrogenase; Provisional
Probab=98.34 E-value=1.3e-06 Score=54.52 Aligned_cols=38 Identities=13% Similarity=0.288 Sum_probs=33.7
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||+++++.|+++ +++|++++|++.
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~---G~~Vvl~~R~~~ 43 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARR---GAKVVLLARGEE 43 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence 56789999999999999999999997 678999998743
No 196
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.34 E-value=1.2e-06 Score=51.63 Aligned_cols=37 Identities=19% Similarity=0.378 Sum_probs=32.8
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++|||++|+||..+++.|++. +++|++++|++
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~---G~~vi~~~r~~ 39 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQK---GAKLALIDLNQ 39 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence 46789999999999999999999997 57899988865
No 197
>PLN02780 ketoreductase/ oxidoreductase
Probab=98.34 E-value=6.9e-07 Score=55.55 Aligned_cols=37 Identities=27% Similarity=0.227 Sum_probs=33.1
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.++.++||||+|+||++++++|+++ +.+|++++|+++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~---G~~Vil~~R~~~ 88 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARK---GLNLVLVARNPD 88 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHC---CCCEEEEECCHH
Confidence 4789999999999999999999997 678999999754
No 198
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=98.34 E-value=8.8e-07 Score=55.02 Aligned_cols=34 Identities=35% Similarity=0.530 Sum_probs=28.8
Q ss_pred EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
||||||+|.||+.++++|++.. ..+|++++|++.
T Consensus 1 VLVTGa~GSIGseL~rql~~~~--p~~lil~d~~E~ 34 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYG--PKKLILFDRDEN 34 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB---SEEEEEES-HH
T ss_pred CEEEccccHHHHHHHHHHHhcC--CCeEEEeCCChh
Confidence 7999999999999999999974 358999999754
No 199
>PRK05650 short chain dehydrogenase; Provisional
Probab=98.33 E-value=1.6e-06 Score=52.13 Aligned_cols=35 Identities=11% Similarity=0.232 Sum_probs=30.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
|+++||||+|+||++++++|+++ +.+|++++|+..
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~---g~~V~~~~r~~~ 35 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWARE---GWRLALADVNEE 35 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 47999999999999999999997 678998888643
No 200
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=98.33 E-value=1.2e-06 Score=52.55 Aligned_cols=38 Identities=13% Similarity=0.135 Sum_probs=33.1
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||.+++++|++. +++|++++|++.
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~---G~~vv~~~~~~~ 45 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKA---GATIVFNDINQE 45 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC---CCeEEEEeCCHH
Confidence 46789999999999999999999987 678888887653
No 201
>KOG1430|consensus
Probab=98.32 E-value=1.3e-06 Score=55.63 Aligned_cols=39 Identities=31% Similarity=0.511 Sum_probs=32.9
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+..+++||||+||+|+|++++|++..+ ..+|++++..+.
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~-~~~irv~D~~~~ 41 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENEL-KLEIRVVDKTPT 41 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhccc-ccEEEEeccCcc
Confidence 345899999999999999999999743 368999998764
No 202
>PRK06139 short chain dehydrogenase; Provisional
Probab=98.32 E-value=1.3e-06 Score=54.57 Aligned_cols=38 Identities=16% Similarity=0.352 Sum_probs=33.7
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||+++++.|+++ +++|++++|+++
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~---G~~Vvl~~R~~~ 42 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARR---GARLVLAARDEE 42 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence 56789999999999999999999997 678999998653
No 203
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=98.32 E-value=1.3e-06 Score=62.01 Aligned_cols=47 Identities=28% Similarity=0.462 Sum_probs=36.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCC-CcceEEEEEeCCCCCChHHHH
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFP-DIGAIYIMVRDKKGSSPEERV 59 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~-~~~~v~~~~r~~~~~~~~~~~ 59 (67)
.++|+||||+||+|++++++|+++.. ...+|+++.|.........++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l 1018 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERL 1018 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHH
Confidence 47899999999999999999998631 236899999976544444443
No 204
>PRK07677 short chain dehydrogenase; Provisional
Probab=98.31 E-value=1.6e-06 Score=51.63 Aligned_cols=36 Identities=25% Similarity=0.445 Sum_probs=31.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++||||+|+||+++++.|+++ +.+|++++|+..
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~---G~~Vi~~~r~~~ 36 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEE---GANVVITGRTKE 36 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 478999999999999999999997 678999988753
No 205
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=98.31 E-value=1.3e-06 Score=53.13 Aligned_cols=32 Identities=34% Similarity=0.596 Sum_probs=27.7
Q ss_pred eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+|+||||+|+||+++++.|+++ +++|++++|.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~---g~~V~~~~~~ 32 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLES---GHEVVVLDNL 32 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhC---CCeEEEEeCC
Confidence 4899999999999999999997 5788887653
No 206
>PRK12743 oxidoreductase; Provisional
Probab=98.31 E-value=3e-06 Score=50.57 Aligned_cols=34 Identities=21% Similarity=0.005 Sum_probs=29.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++++||||+|+||.++++.|++. +++|+++.++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~---G~~V~~~~~~ 35 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQ---GFDIGITWHS 35 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCC
Confidence 468999999999999999999997 6788877654
No 207
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=98.30 E-value=1.1e-06 Score=53.35 Aligned_cols=45 Identities=16% Similarity=0.246 Sum_probs=30.2
Q ss_pred EEEcCCChHHHHHHHHHHhhCCCcceEEEEEe-CCCCCChHHHHHHHhh
Q psy17490 17 LVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR-DKKGSSPEERVKNMLN 64 (67)
Q Consensus 17 litGa~G~iG~~l~~~l~~~~~~~~~v~~~~r-~~~~~~~~~~~~~~~~ 64 (67)
+||||+||||+++++.|++. ++.|+++.+ ...+......+..+++
T Consensus 1 lItGa~GfiG~~l~~~L~~~---g~~v~~~~~~~~~Dl~~~~~l~~~~~ 46 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEAL---GFTNLVLRTHKELDLTRQADVEAFFA 46 (306)
T ss_pred CcccCCCcccHHHHHHHHhC---CCcEEEeeccccCCCCCHHHHHHHHh
Confidence 69999999999999999987 555555443 3333334444544443
No 208
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=98.30 E-value=1.8e-06 Score=50.99 Aligned_cols=34 Identities=21% Similarity=0.210 Sum_probs=29.0
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 48 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r 48 (67)
++++++|||++|+||++++++|++. +++|++..+
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~---G~~vv~~~~ 35 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKD---GFKVVAGCG 35 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHc---CCEEEEEcC
Confidence 5689999999999999999999997 577776543
No 209
>PRK06953 short chain dehydrogenase; Provisional
Probab=98.29 E-value=1.4e-06 Score=51.03 Aligned_cols=35 Identities=14% Similarity=0.241 Sum_probs=30.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++++||||+|+||++++++|++. +.+|++++|++.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~---G~~v~~~~r~~~ 36 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRAD---GWRVIATARDAA 36 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhC---CCEEEEEECCHH
Confidence 57999999999999999999986 678999988743
No 210
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=98.27 E-value=1.9e-06 Score=51.52 Aligned_cols=35 Identities=23% Similarity=0.289 Sum_probs=31.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
|+++||||+|.||+.++++|+++ +++|++++|++.
T Consensus 1 m~vlItGas~gIG~aia~~l~~~---G~~V~~~~r~~~ 35 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKK---GARVVISSRNEE 35 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence 57999999999999999999997 678999988753
No 211
>KOG1205|consensus
Probab=98.24 E-value=3e-06 Score=52.46 Aligned_cols=41 Identities=17% Similarity=0.281 Sum_probs=35.2
Q ss_pred hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.+.+.+|.++||||+..||.+++.+|.++ +.+++.+.|...
T Consensus 7 ~e~~~~kvVvITGASsGIG~~lA~~la~~---G~~l~lvar~~r 47 (282)
T KOG1205|consen 7 MERLAGKVVLITGASSGIGEALAYELAKR---GAKLVLVARRAR 47 (282)
T ss_pred HHHhCCCEEEEeCCCcHHHHHHHHHHHhC---CCceEEeehhhh
Confidence 34578999999999999999999999998 677777777654
No 212
>PRK08303 short chain dehydrogenase; Provisional
Probab=98.24 E-value=2.8e-06 Score=52.55 Aligned_cols=37 Identities=24% Similarity=0.266 Sum_probs=33.4
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++||||++.||.++++.|++. +.+|++++|+.
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~---G~~Vv~~~r~~ 42 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAA---GATVYVTGRST 42 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeccc
Confidence 57899999999999999999999997 67899999874
No 213
>PRK05884 short chain dehydrogenase; Provisional
Probab=98.24 E-value=2.7e-06 Score=50.21 Aligned_cols=34 Identities=18% Similarity=0.313 Sum_probs=30.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
|+++||||+|.||+++++.|.++ +++|++++|+.
T Consensus 1 m~vlItGas~giG~~ia~~l~~~---g~~v~~~~r~~ 34 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRND---GHKVTLVGARR 34 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence 46999999999999999999987 67899998864
No 214
>PRK07832 short chain dehydrogenase; Provisional
Probab=98.24 E-value=2.4e-06 Score=51.43 Aligned_cols=34 Identities=21% Similarity=0.314 Sum_probs=30.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
++++||||+|+||.++++.|+++ +.+|++++|++
T Consensus 1 k~vlItGas~giG~~la~~la~~---G~~vv~~~r~~ 34 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQ---GAELFLTDRDA 34 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence 47999999999999999999987 57888888864
No 215
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.23 E-value=3.1e-06 Score=56.89 Aligned_cols=28 Identities=29% Similarity=0.279 Sum_probs=24.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceE
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAI 43 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v 43 (67)
.|+||||||+||||+++++.|.++ +++|
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~---g~~v 407 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQ---GIAY 407 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhC---CCeE
Confidence 478999999999999999999886 4666
No 216
>PRK06125 short chain dehydrogenase; Provisional
Probab=98.23 E-value=2.9e-06 Score=50.68 Aligned_cols=38 Identities=16% Similarity=0.268 Sum_probs=33.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++|||++|.+|.++++.|++. +.+|++++|++.
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~---G~~V~~~~r~~~ 42 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAE---GCHLHLVARDAD 42 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence 46789999999999999999999997 579999998753
No 217
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=98.23 E-value=3.2e-06 Score=49.74 Aligned_cols=34 Identities=21% Similarity=0.137 Sum_probs=30.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
++++||||+|+||+++++.|.+. +.+|++++|+.
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~---g~~vi~~~r~~ 36 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLND---GYRVIATYFSG 36 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHc---CCEEEEEeCCc
Confidence 57999999999999999999987 57899998874
No 218
>PRK07791 short chain dehydrogenase; Provisional
Probab=98.23 E-value=3.3e-06 Score=51.54 Aligned_cols=37 Identities=14% Similarity=0.108 Sum_probs=32.7
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++||||++.||.++++.|++. +.+|++++|+.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~---G~~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAE---GARVVVNDIGV 40 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEeeCCc
Confidence 57899999999999999999999997 67888887754
No 219
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=98.23 E-value=3.1e-06 Score=50.50 Aligned_cols=36 Identities=17% Similarity=-0.021 Sum_probs=31.8
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++++++|||++|.||.+++++|.+. +++|+.+++.
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~---G~~vv~~~~~ 43 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEA---GCDIVGINIV 43 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEecCc
Confidence 66889999999999999999999997 6788877664
No 220
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.22 E-value=6.4e-06 Score=50.08 Aligned_cols=38 Identities=16% Similarity=0.265 Sum_probs=34.4
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.++|.++||||+..||.++++.|.+. |++|++..|+.+
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~---G~~vvl~aRR~d 41 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEA---GAKVVLAARREE 41 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHC---CCeEEEEeccHH
Confidence 45689999999999999999999998 789999999854
No 221
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=98.22 E-value=2.8e-06 Score=57.50 Aligned_cols=38 Identities=18% Similarity=0.231 Sum_probs=33.8
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||++++++|++. +++|++++|+..
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~---Ga~Vvi~~r~~~ 449 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAE---GAHVVLADLNLE 449 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhC---CCEEEEEeCCHH
Confidence 56789999999999999999999997 679999998743
No 222
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.22 E-value=3.1e-06 Score=56.32 Aligned_cols=38 Identities=16% Similarity=0.337 Sum_probs=33.7
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||.++++.|+++ +++|++++|+++
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~---G~~V~~~~r~~~ 406 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEA---GATVFLVARNGE 406 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence 55789999999999999999999997 679999998753
No 223
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=98.22 E-value=3.2e-06 Score=49.64 Aligned_cols=33 Identities=24% Similarity=0.270 Sum_probs=29.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
++++||||+|+||+++++.|++. +++|+++.|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~---G~~v~~~~r~ 33 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKD---GYRVAANCGP 33 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCC
Confidence 57899999999999999999987 6788888873
No 224
>PRK07069 short chain dehydrogenase; Validated
Probab=98.21 E-value=5.9e-06 Score=48.82 Aligned_cols=32 Identities=13% Similarity=0.395 Sum_probs=29.1
Q ss_pred eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++||||+|+||.++++.|+++ +++|++++|+
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~---G~~v~~~~r~ 32 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQ---GAKVFLTDIN 32 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHC---CCEEEEEeCC
Confidence 3899999999999999999987 6799999987
No 225
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=98.21 E-value=3.5e-06 Score=49.79 Aligned_cols=32 Identities=41% Similarity=0.555 Sum_probs=29.9
Q ss_pred EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
|+|+||+|.+|+.+++.|++. +++|.++.|+.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~---~~~V~~l~R~~ 32 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSA---GFSVRALVRDP 32 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHT---TGCEEEEESSS
T ss_pred CEEECCccHHHHHHHHHHHhC---CCCcEEEEecc
Confidence 799999999999999999995 68999999986
No 226
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.21 E-value=3.2e-06 Score=50.61 Aligned_cols=36 Identities=8% Similarity=0.032 Sum_probs=32.3
Q ss_pred ccCCeEEEEcCC--ChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~--G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++|+++||||+ +.||..+++.|++. +.+|++.+|+
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~---G~~Vi~~~r~ 42 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQ---GATVIYTYQN 42 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHC---CCEEEEecCc
Confidence 678999999999 79999999999997 6889888876
No 227
>PRK09620 hypothetical protein; Provisional
Probab=98.20 E-value=4.1e-06 Score=50.40 Aligned_cols=36 Identities=17% Similarity=0.437 Sum_probs=31.3
Q ss_pred ccCCeEEEEcCC----------------ChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGT----------------GFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~----------------G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++++|+||+|. ||+|++++++|+.+ |++|+++++.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~---Ga~V~li~g~ 52 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISK---GAHVIYLHGY 52 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHC---CCeEEEEeCC
Confidence 368899999886 99999999999998 6899988863
No 228
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=98.20 E-value=1e-05 Score=45.18 Aligned_cols=34 Identities=24% Similarity=0.423 Sum_probs=29.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
|+++||||++.||..++++|+++ ....|+++.|+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~--g~~~v~~~~r~ 34 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARR--GARVVILTSRS 34 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT--TTEEEEEEESS
T ss_pred CEEEEECCCCHHHHHHHHHHHhc--CceEEEEeeec
Confidence 57999999999999999999998 24578888887
No 229
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.20 E-value=6.5e-06 Score=49.50 Aligned_cols=37 Identities=8% Similarity=0.012 Sum_probs=32.1
Q ss_pred ccCCeEEEEcCC--ChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~--G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++||||+ +.||.++++.|++. +.+|++.+|+.
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la~~---G~~v~~~~r~~ 43 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLHNA---GAKLVFTYAGE 43 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHC---CCEEEEecCcc
Confidence 467899999997 89999999999997 67898887753
No 230
>KOG1431|consensus
Probab=98.19 E-value=8.5e-06 Score=49.75 Aligned_cols=53 Identities=21% Similarity=0.276 Sum_probs=40.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHHHHhhcC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 66 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~ 66 (67)
++|+|||++|.+|+++.+.+.++..+..+.........+.......+.+|...
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~skd~DLt~~a~t~~lF~~e 54 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSKDADLTNLADTRALFESE 54 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccccccccchHHHHHHHhcc
Confidence 68999999999999999999998654456666666655566667777777643
No 231
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=98.19 E-value=7.2e-06 Score=48.51 Aligned_cols=32 Identities=16% Similarity=0.050 Sum_probs=27.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 48 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r 48 (67)
++++||||+|+||.++++.|++. +.+|+++.+
T Consensus 3 k~ilItGas~giG~~la~~l~~~---g~~v~~~~~ 34 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAAR---GWSVGINYA 34 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHC---CCEEEEEeC
Confidence 58999999999999999999997 567766554
No 232
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=98.19 E-value=4.3e-06 Score=49.55 Aligned_cols=34 Identities=26% Similarity=0.293 Sum_probs=30.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
++++||||+|+||.+++++|++. +.+|+++.|+.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~---G~~v~~~~r~~ 34 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKD---GFAVAVADLNE 34 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence 47999999999999999999987 67898888864
No 233
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.18 E-value=5.2e-06 Score=49.85 Aligned_cols=37 Identities=8% Similarity=-0.093 Sum_probs=32.4
Q ss_pred ccCCeEEEEcCC--ChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~--G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++||||+ +.||.++++.|+++ +.+|++.+|+.
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~---G~~v~l~~r~~ 46 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRAL---GAELAVTYLND 46 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHc---CCEEEEEeCCh
Confidence 578999999998 59999999999997 67898888864
No 234
>PRK05855 short chain dehydrogenase; Validated
Probab=98.18 E-value=4.5e-06 Score=54.34 Aligned_cols=38 Identities=16% Similarity=0.164 Sum_probs=33.5
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||+|+||++++++|.++ +++|++++|+.+
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~---G~~v~~~~r~~~ 350 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFARE---GAEVVASDIDEA 350 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 56789999999999999999999987 678999998753
No 235
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=98.18 E-value=8e-06 Score=48.10 Aligned_cols=31 Identities=23% Similarity=0.173 Sum_probs=26.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV 47 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~ 47 (67)
++++||||+|+||++++++|+++ +++|+++.
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~---g~~v~~~~ 32 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQE---GYTVAVNY 32 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC---CCEEEEEe
Confidence 47999999999999999999987 57777643
No 236
>PRK06123 short chain dehydrogenase; Provisional
Probab=98.16 E-value=5.1e-06 Score=49.07 Aligned_cols=34 Identities=12% Similarity=0.012 Sum_probs=28.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++++||||+|+||.+++++|+++ ++.|++..++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~---G~~vv~~~~~ 35 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAER---GYAVCLNYLR 35 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC---CCeEEEecCC
Confidence 357999999999999999999997 5677666543
No 237
>PRK07831 short chain dehydrogenase; Provisional
Probab=98.16 E-value=4.4e-06 Score=49.98 Aligned_cols=39 Identities=18% Similarity=0.221 Sum_probs=33.1
Q ss_pred hccCCeEEEEcCCC-hHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 10 FYRDGQILVTGGTG-FMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 10 ~~~~~~ilitGa~G-~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.+++++++||||+| .||.++++.|+++ +.+|++.+|+..
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~---G~~V~~~~~~~~ 53 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEE---GARVVISDIHER 53 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence 45678999999997 6999999999987 678888887643
No 238
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=98.15 E-value=4e-06 Score=49.07 Aligned_cols=32 Identities=28% Similarity=0.362 Sum_probs=28.8
Q ss_pred EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
++|||++|+||++++++|+++ +++|++++|+.
T Consensus 1 vlItG~~g~iG~~la~~l~~~---G~~v~~~~r~~ 32 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKE---GAKVIITYRSS 32 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCc
Confidence 589999999999999999997 67899998865
No 239
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=98.14 E-value=8.3e-06 Score=49.01 Aligned_cols=33 Identities=15% Similarity=0.120 Sum_probs=28.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
..++||||+|+||.++++.|++. +.+|+++.|+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~---G~~V~~~~~~ 34 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQE---GYRVVLHYHR 34 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhC---CCeEEEEcCC
Confidence 46899999999999999999997 6788887654
No 240
>PRK06720 hypothetical protein; Provisional
Probab=98.14 E-value=8.1e-06 Score=46.94 Aligned_cols=38 Identities=18% Similarity=0.143 Sum_probs=33.5
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++++.++||||++.||..++..|.+. +.+|++.+|+.+
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~---G~~V~l~~r~~~ 51 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQ---GAKVIVTDIDQE 51 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHC---CCEEEEEECCHH
Confidence 57889999999999999999999987 678999888643
No 241
>PRK08862 short chain dehydrogenase; Provisional
Probab=98.13 E-value=8.6e-06 Score=48.37 Aligned_cols=38 Identities=16% Similarity=0.291 Sum_probs=33.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++||||++.||..+++.|.+. +.+|++++|+.+
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~---G~~V~~~~r~~~ 40 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARL---GATLILCDQDQS 40 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHC---CCEEEEEcCCHH
Confidence 46789999999999999999999997 678999888654
No 242
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=98.13 E-value=1.9e-05 Score=43.76 Aligned_cols=36 Identities=28% Similarity=0.350 Sum_probs=29.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++++||||+|++|.+++++|++++ .+.|+++.|++.
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g--~~~v~~~~r~~~ 36 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERG--ARHLVLLSRSGP 36 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhh--CCeEEEEeCCCC
Confidence 468999999999999999999872 246788888654
No 243
>PRK08324 short chain dehydrogenase; Validated
Probab=98.13 E-value=5.3e-06 Score=56.09 Aligned_cols=38 Identities=24% Similarity=0.285 Sum_probs=33.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+.+++++||||+|+||.++++.|++. +.+|++++|+..
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~---Ga~Vvl~~r~~~ 457 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAE---GACVVLADLDEE 457 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHC---cCEEEEEeCCHH
Confidence 46789999999999999999999987 678999998754
No 244
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=98.13 E-value=1.5e-05 Score=47.96 Aligned_cols=37 Identities=16% Similarity=0.048 Sum_probs=31.1
Q ss_pred ccCCeEEEEcCC--ChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~--G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++||||+ +.||.++++.|++. +.+|++..|+.
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~---G~~v~~~~~~~ 42 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAA---GAELGITYLPD 42 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHC---CCEEEEEecCc
Confidence 467899999986 79999999999997 67888776653
No 245
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.12 E-value=6.8e-06 Score=52.03 Aligned_cols=41 Identities=17% Similarity=0.285 Sum_probs=33.2
Q ss_pred hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.+++++++||||+|++|+.++++|..+. ...+++++.|+..
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~-gv~~lilv~R~~~ 192 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKT-GVAELLLVARQQE 192 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhC-CCCEEEEEcCCHH
Confidence 3678999999999999999999998641 2358888888643
No 246
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.11 E-value=5.5e-06 Score=50.26 Aligned_cols=37 Identities=8% Similarity=0.052 Sum_probs=32.4
Q ss_pred ccCCeEEEEcCCC--hHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G--~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
++++.++||||++ .||+.+++.|++. +.+|++.+|+.
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~---Ga~V~~~~r~~ 43 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQ---GAELAFTYQGE 43 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhC---CCEEEEecCch
Confidence 5688999999997 9999999999997 68898888753
No 247
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.10 E-value=6.6e-06 Score=49.06 Aligned_cols=36 Identities=19% Similarity=0.171 Sum_probs=31.5
Q ss_pred ccCCeEEEEcCCC--hHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G--~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++++++||||+| .||.+++++|+++ +++|++++|+
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~---G~~vi~~~r~ 40 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAK---GIDIFFTYWS 40 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHc---CCcEEEEcCC
Confidence 4568899999996 6999999999997 5789999887
No 248
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.10 E-value=8e-06 Score=52.51 Aligned_cols=38 Identities=18% Similarity=0.135 Sum_probs=32.9
Q ss_pred hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.+++++++||||+|+||..+++.|.++ +.+|++++++.
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~---Ga~vi~~~~~~ 244 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARD---GAHVVCLDVPA 244 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHC---CCEEEEEeCCc
Confidence 356789999999999999999999987 67899988753
No 249
>PRK07578 short chain dehydrogenase; Provisional
Probab=98.08 E-value=2.1e-05 Score=45.34 Aligned_cols=33 Identities=24% Similarity=0.448 Sum_probs=28.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
|+++||||+|.||.+++++|.++ .+|++++|++
T Consensus 1 ~~vlItGas~giG~~la~~l~~~----~~vi~~~r~~ 33 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR----HEVITAGRSS 33 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc----CcEEEEecCC
Confidence 47999999999999999999875 5788888865
No 250
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=98.08 E-value=1.6e-05 Score=43.31 Aligned_cols=35 Identities=23% Similarity=0.590 Sum_probs=28.8
Q ss_pred eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+|.|.||+|++|+.+++.|.+. |....+.+++++.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~h-p~~e~~~~~~~~~ 35 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEH-PDFELVALVSSSR 35 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT-STEEEEEEEESTT
T ss_pred CEEEECCCCHHHHHHHHHHhcC-CCccEEEeeeecc
Confidence 5899999999999999999995 5655566666665
No 251
>PRK06484 short chain dehydrogenase; Validated
Probab=98.08 E-value=9.2e-06 Score=52.86 Aligned_cols=38 Identities=21% Similarity=0.329 Sum_probs=33.5
Q ss_pred hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
...+++++||||+|.||.++++.|+++ +++|++++|+.
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~---G~~V~~~~r~~ 303 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAA---GDRLLIIDRDA 303 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence 346789999999999999999999997 67999999864
No 252
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=98.07 E-value=1.3e-05 Score=47.13 Aligned_cols=35 Identities=31% Similarity=0.620 Sum_probs=27.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
|+++||||+|+||++++++|+++.. ...|....|+
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~-~~~v~~~~~~ 35 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYP-DATVHATYRH 35 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCC-CCEEEEEccC
Confidence 5799999999999999999999732 2356555554
No 253
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=98.07 E-value=1.1e-05 Score=49.86 Aligned_cols=36 Identities=17% Similarity=0.207 Sum_probs=31.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCc-ceEEEEEeCCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDI-GAIYIMVRDKK 51 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~-~~v~~~~r~~~ 51 (67)
+++++||||++.||.++++.|+++ + ++|++++|+..
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~---G~~~V~l~~r~~~ 39 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAAT---GEWHVIMACRDFL 39 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHc---CCCEEEEEeCCHH
Confidence 568999999999999999999997 6 78999888643
No 254
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=98.06 E-value=1.2e-05 Score=47.35 Aligned_cols=32 Identities=22% Similarity=0.315 Sum_probs=28.0
Q ss_pred EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
++||||+|+||.++++.|+++ +.+|++++|..
T Consensus 1 vlItGas~giG~~~a~~l~~~---G~~v~~~~~~~ 32 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAAD---GFEICVHYHSG 32 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCC
Confidence 589999999999999999987 67888887753
No 255
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.05 E-value=8.2e-06 Score=49.11 Aligned_cols=36 Identities=11% Similarity=0.014 Sum_probs=30.8
Q ss_pred ccCCeEEEEcC--CChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGG--TGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa--~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++++++|||| ++.||+++++.|+++ +.+|++..|.
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~---G~~v~~~~~~ 41 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQ---GAELAFTYVV 41 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHC---CCEEEEEcCc
Confidence 57889999997 679999999999997 6788887664
No 256
>PRK08309 short chain dehydrogenase; Provisional
Probab=98.04 E-value=1.2e-05 Score=46.71 Aligned_cols=33 Identities=24% Similarity=0.300 Sum_probs=28.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
|+++||||+||+|. +++.|.++ +++|++++|++
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~---G~~V~v~~R~~ 33 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEK---GFHVSVIARRE 33 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHC---cCEEEEEECCH
Confidence 57999999998876 99999997 68999988864
No 257
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.04 E-value=1.2e-05 Score=48.72 Aligned_cols=36 Identities=17% Similarity=0.188 Sum_probs=31.5
Q ss_pred ccCCeEEEEcCCC--hHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G--~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++++++||||++ .||+++++.|+++ +++|++.+|+
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~---G~~vil~~r~ 41 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHRE---GAELAFTYQN 41 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHC---CCEEEEEecc
Confidence 5688999999985 8999999999997 6788888775
No 258
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=98.04 E-value=1.3e-05 Score=49.58 Aligned_cols=47 Identities=21% Similarity=0.244 Sum_probs=36.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHHHHhh
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN 64 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~ 64 (67)
|+|||||++|.+|..|++.|. . ..+|+.++|..-+....+.+..++.
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~---~~~v~a~~~~~~Ditd~~~v~~~i~ 47 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-G---EFEVIATDRAELDITDPDAVLEVIR 47 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-C---CceEEeccCccccccChHHHHHHHH
Confidence 459999999999999999987 2 3689999998766665555555544
No 259
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.04 E-value=1e-05 Score=49.25 Aligned_cols=37 Identities=5% Similarity=0.024 Sum_probs=32.1
Q ss_pred ccCCeEEEEcCC--ChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~--G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++|+++||||+ +.||+.+++.|++. +.+|++.+|+.
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~---G~~Vil~~r~~ 41 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQ---GAELAFTYLNE 41 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHC---CCEEEEEecCH
Confidence 467899999997 79999999999997 67898888863
No 260
>PRK06484 short chain dehydrogenase; Validated
Probab=98.03 E-value=1e-05 Score=52.67 Aligned_cols=38 Identities=21% Similarity=0.363 Sum_probs=33.4
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.++++++||||++.||.++++.|.++ +++|++++|+.+
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~---G~~V~~~~r~~~ 40 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARA---GDQVVVADRNVE 40 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 35789999999999999999999997 689999988644
No 261
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.02 E-value=1.8e-05 Score=47.50 Aligned_cols=37 Identities=14% Similarity=0.064 Sum_probs=32.4
Q ss_pred ccCCeEEEEcC--CChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGG--TGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa--~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++|||| ++.||.++++.|+++ +.+|++.+|+.
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~---G~~v~l~~r~~ 43 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQ---GAEVVLTGFGR 43 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHC---CCEEEEecCcc
Confidence 56789999999 899999999999997 67899888753
No 262
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.02 E-value=1.1e-05 Score=48.57 Aligned_cols=36 Identities=8% Similarity=0.093 Sum_probs=31.2
Q ss_pred ccCCeEEEEcCCC--hHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G--~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
++++.++||||++ .||.++++.|.++ +.+|++.+|+
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~---G~~v~~~~r~ 43 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKH---GAELWFTYQS 43 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHc---CCEEEEEeCc
Confidence 5678999999997 8999999999987 6788887775
No 263
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.01 E-value=1.1e-05 Score=48.95 Aligned_cols=38 Identities=5% Similarity=-0.044 Sum_probs=32.3
Q ss_pred hhccCCeEEEEcCC--ChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 9 DFYRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 9 ~~~~~~~ilitGa~--G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
..+++++++||||+ +.||.++++.|+++ +.+|++..|+
T Consensus 6 ~~~~~k~~lItGas~~~GIG~aia~~la~~---G~~V~l~~r~ 45 (272)
T PRK08159 6 GLMAGKRGLILGVANNRSIAWGIAKACRAA---GAELAFTYQG 45 (272)
T ss_pred ccccCCEEEEECCCCCCcHHHHHHHHHHHC---CCEEEEEcCc
Confidence 34678899999997 89999999999997 6788887765
No 264
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=97.98 E-value=2.2e-05 Score=46.48 Aligned_cols=38 Identities=21% Similarity=0.312 Sum_probs=32.5
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+.+++++||||++.||..+++.|.++ +..|+++.+...
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~---G~~v~~~~~~~~ 40 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALARE---GARVVVAARRSE 40 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC---CCeEEEEcCCCc
Confidence 46789999999999999999999976 678887777654
No 265
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.96 E-value=2.1e-05 Score=47.11 Aligned_cols=35 Identities=17% Similarity=0.245 Sum_probs=29.9
Q ss_pred ccCCeEEEEcCCC--hHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490 11 YRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVR 48 (67)
Q Consensus 11 ~~~~~ilitGa~G--~iG~~l~~~l~~~~~~~~~v~~~~r 48 (67)
+++++++||||+| .||.+++++|++. +.+|++..|
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~---G~~vi~~~~ 40 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEA---GADIFFTYW 40 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHC---CCeEEEEec
Confidence 6789999999995 8999999999997 578877654
No 266
>PRK07041 short chain dehydrogenase; Provisional
Probab=97.94 E-value=1.4e-05 Score=46.78 Aligned_cols=31 Identities=26% Similarity=0.354 Sum_probs=28.0
Q ss_pred EEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 17 LVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 17 litGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+||||+|++|++++++|+++ +.+|++++|++
T Consensus 1 lItGas~~iG~~~a~~l~~~---G~~v~~~~r~~ 31 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAE---GARVTIASRSR 31 (230)
T ss_pred CeecCCChHHHHHHHHHHHC---CCEEEEEeCCH
Confidence 59999999999999999997 67899999874
No 267
>PRK05599 hypothetical protein; Provisional
Probab=97.91 E-value=3.3e-05 Score=46.11 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=29.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
|+++||||++.||..++++|. + +.+|++++|+.+
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~---g~~Vil~~r~~~ 34 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-H---GEDVVLAARRPE 34 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-C---CCEEEEEeCCHH
Confidence 579999999999999999987 4 478999888654
No 268
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.91 E-value=3.6e-05 Score=44.75 Aligned_cols=38 Identities=26% Similarity=0.339 Sum_probs=32.9
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++|+||+|.+|+.+++.|.+. +++|++++|+..
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~---g~~V~l~~R~~~ 63 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLARE---GARVVLVGRDLE 63 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEcCCHH
Confidence 46789999999999999999999886 578999988743
No 269
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.90 E-value=2.8e-05 Score=46.86 Aligned_cols=36 Identities=14% Similarity=0.061 Sum_probs=30.5
Q ss_pred ccCCeEEEEcC--CChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGG--TGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa--~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++++++|||| ++.||.++++.|++. +++|++.+|.
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~---G~~v~~~~~~ 41 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKRE---GAELAFTYVG 41 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHC---CCeEEEEccc
Confidence 56789999996 679999999999997 6788887654
No 270
>KOG1201|consensus
Probab=97.89 E-value=7.9e-05 Score=46.51 Aligned_cols=39 Identities=18% Similarity=0.280 Sum_probs=33.8
Q ss_pred hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
..+++.++||||.+.+|+.++.+++++ +..+.+.|.+..
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~r---g~~~vl~Din~~ 73 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAKR---GAKLVLWDINKQ 73 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHHh---CCeEEEEecccc
Confidence 366889999999999999999999998 567888887655
No 271
>KOG0725|consensus
Probab=97.88 E-value=3.1e-05 Score=47.55 Aligned_cols=39 Identities=26% Similarity=0.272 Sum_probs=35.5
Q ss_pred hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.+.+|.++||||+..||++++..|.+. +.+|++.+|+.+
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~---Ga~v~i~~r~~~ 43 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKA---GAKVVITGRSEE 43 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 477899999999999999999999998 789999999765
No 272
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=97.85 E-value=0.00012 Score=42.22 Aligned_cols=45 Identities=22% Similarity=0.338 Sum_probs=33.8
Q ss_pred eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC-CCCChHHHHHH
Q psy17490 15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK-KGSSPEERVKN 61 (67)
Q Consensus 15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~-~~~~~~~~~~~ 61 (67)
+++||||.|.+|..++++|..+. ..+|+++.|+. ........+..
T Consensus 2 tylitGG~gglg~~la~~La~~~--~~~~il~~r~~~~~~~~~~~i~~ 47 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERG--ARRLILLGRSGAPSAEAEAAIRE 47 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT---SEEEEEESSGGGSTTHHHHHHH
T ss_pred EEEEECCccHHHHHHHHHHHHcC--CCEEEEeccCCCccHHHHHHHHH
Confidence 68999999999999999999983 45899999983 33333333333
No 273
>KOG4169|consensus
Probab=97.81 E-value=2.8e-05 Score=47.26 Aligned_cols=51 Identities=18% Similarity=0.244 Sum_probs=38.5
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHHHHhh
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN 64 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~ 64 (67)
+++|++++||+.|.||..+.++|+.. +..+.+++-+.++.+...+++++..
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~k---gik~~~i~~~~En~~a~akL~ai~p 53 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEK---GIKVLVIDDSEENPEAIAKLQAINP 53 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHc---CchheeehhhhhCHHHHHHHhccCC
Confidence 57999999999999999999999998 4566666655555555555555543
No 274
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=97.81 E-value=3.9e-05 Score=45.88 Aligned_cols=37 Identities=19% Similarity=0.348 Sum_probs=29.6
Q ss_pred eEEEEcCCChHHHHHHHHHHhhC-CCcceEEEEEeCCC
Q psy17490 15 QILVTGGTGFMGKLLIDKLLRSF-PDIGAIYIMVRDKK 51 (67)
Q Consensus 15 ~ilitGa~G~iG~~l~~~l~~~~-~~~~~v~~~~r~~~ 51 (67)
.++||||++.||.+++++|.+.. ..+.+|++++|+..
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~ 39 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDE 39 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHH
Confidence 58999999999999999998721 02578999988743
No 275
>KOG1208|consensus
Probab=97.79 E-value=6.8e-05 Score=47.07 Aligned_cols=38 Identities=21% Similarity=0.195 Sum_probs=34.1
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+.+++++|||||..||.+.++.|..+ +.+|+...|+..
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~---Ga~Vv~~~R~~~ 70 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALR---GAHVVLACRNEE 70 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhC---CCEEEEEeCCHH
Confidence 45689999999999999999999998 689999999863
No 276
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.79 E-value=6e-05 Score=45.34 Aligned_cols=38 Identities=26% Similarity=0.400 Sum_probs=33.3
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+.+-+||||||+..||..+++.|++. +.+|++..|+..
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~el---gN~VIi~gR~e~ 40 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLEL---GNTVIICGRNEE 40 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHh---CCEEEEecCcHH
Confidence 45679999999999999999999998 689999888743
No 277
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=97.78 E-value=8e-05 Score=46.39 Aligned_cols=36 Identities=14% Similarity=0.054 Sum_probs=31.3
Q ss_pred hccCCeEEEEcC--CChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 10 FYRDGQILVTGG--TGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 10 ~~~~~~ilitGa--~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
.+++|+++|||| +..||.++++.|.+. |.+|++ .|.
T Consensus 6 ~l~gk~alITGa~~s~GIG~a~A~~la~~---Ga~Vv~-~~~ 43 (303)
T PLN02730 6 DLRGKRAFIAGVADDNGYGWAIAKALAAA---GAEILV-GTW 43 (303)
T ss_pred CCCCCEEEEeCCCCCCcHHHHHHHHHHHC---CCEEEE-EeC
Confidence 378999999999 799999999999997 678877 553
No 278
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=97.74 E-value=6.9e-05 Score=48.38 Aligned_cols=38 Identities=21% Similarity=0.257 Sum_probs=33.6
Q ss_pred hccCCeEEEEcC----------------CChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 10 FYRDGQILVTGG----------------TGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 10 ~~~~~~ilitGa----------------~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.+++++++|||| +|.+|.++++.|..+ |.+|++++++.
T Consensus 185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~---Ga~V~~v~~~~ 238 (399)
T PRK05579 185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARR---GADVTLVSGPV 238 (399)
T ss_pred ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHC---CCEEEEeCCCc
Confidence 367899999999 999999999999998 78999988753
No 279
>PRK06940 short chain dehydrogenase; Provisional
Probab=97.72 E-value=8.9e-05 Score=44.99 Aligned_cols=34 Identities=12% Similarity=0.255 Sum_probs=28.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++|||| |+||+++++.|. . +++|++++|+..
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~---G~~Vv~~~r~~~ 35 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-A---GKKVLLADYNEE 35 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-C---CCEEEEEeCCHH
Confidence 357899998 699999999985 4 579999998643
No 280
>KOG1014|consensus
Probab=97.62 E-value=0.00013 Score=45.78 Aligned_cols=36 Identities=22% Similarity=0.263 Sum_probs=32.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG 52 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~ 52 (67)
+-.+|||||..||+..+++|.++ |.+|++++|.++.
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkr---G~nvvLIsRt~~K 85 (312)
T KOG1014|consen 50 SWAVVTGATDGIGKAYARELAKR---GFNVVLISRTQEK 85 (312)
T ss_pred CEEEEECCCCcchHHHHHHHHHc---CCEEEEEeCCHHH
Confidence 66899999999999999999998 7899999998763
No 281
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.62 E-value=0.00018 Score=45.27 Aligned_cols=38 Identities=16% Similarity=0.151 Sum_probs=30.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCC----CcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFP----DIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~----~~~~v~~~~r~~~ 51 (67)
.+|+||||+|++|++++..|+...- .+.+|+++++++.
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~ 44 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPA 44 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCc
Confidence 4799999999999999999988521 1248999998653
No 282
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=97.59 E-value=0.00017 Score=43.36 Aligned_cols=27 Identities=19% Similarity=0.399 Sum_probs=24.1
Q ss_pred cCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 20 GGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 20 Ga~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
.++||+|.+++++|+++ |++|++++|+
T Consensus 23 ~SSG~iG~aLA~~L~~~---G~~V~li~r~ 49 (229)
T PRK06732 23 HSTGQLGKIIAETFLAA---GHEVTLVTTK 49 (229)
T ss_pred ccchHHHHHHHHHHHhC---CCEEEEEECc
Confidence 67899999999999997 6899999875
No 283
>KOG4039|consensus
Probab=97.59 E-value=0.00016 Score=42.89 Aligned_cols=39 Identities=23% Similarity=0.465 Sum_probs=34.8
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++|..+|.||||..|+-++++++++ +...+|+++.|++
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~-~~FSKV~~i~RR~ 54 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEA-PQFSKVYAILRRE 54 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhc-ccceeEEEEEecc
Confidence 56789999999999999999999997 5668999999974
No 284
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.58 E-value=0.0003 Score=44.33 Aligned_cols=37 Identities=16% Similarity=0.319 Sum_probs=28.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
++|+|.||+|++|+.+++.|.++.-...++..+.+..
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~ 38 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASAR 38 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccc
Confidence 5899999999999999999988521123667776653
No 285
>KOG1203|consensus
Probab=97.57 E-value=0.00011 Score=47.66 Aligned_cols=38 Identities=29% Similarity=0.491 Sum_probs=33.9
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.+...|+|.||+|.+|+.+++.|+++ +..|.++.|+..
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkr---gf~vra~VRd~~ 114 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKR---GFSVRALVRDEQ 114 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHC---CCeeeeeccChh
Confidence 45568999999999999999999998 689999999865
No 286
>KOG0747|consensus
Probab=97.55 E-value=0.00011 Score=45.91 Aligned_cols=35 Identities=31% Similarity=0.727 Sum_probs=29.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 48 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r 48 (67)
-++++||||+||||++.+..+...+|+. +++.++.
T Consensus 6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~-~~v~idk 40 (331)
T KOG0747|consen 6 EKNVLITGGAGFIGSNFINYLVDKYPDY-KFVNLDK 40 (331)
T ss_pred cceEEEecCcCcchhhhhhhcccCCCCC-cEEEEee
Confidence 3789999999999999999999987764 5555554
No 287
>PRK05086 malate dehydrogenase; Provisional
Probab=97.50 E-value=0.00038 Score=43.59 Aligned_cols=38 Identities=18% Similarity=0.180 Sum_probs=30.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
|+|+|+||+|.+|++++..+....+.++.++++++++.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~ 38 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV 38 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC
Confidence 58999999999999999988663334578888888643
No 288
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=97.47 E-value=0.0003 Score=41.76 Aligned_cols=35 Identities=40% Similarity=0.386 Sum_probs=30.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
|+|.|+||+|.+|+.+...|.+. +++|++.+|+++
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~---G~~V~v~~r~~~ 35 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKA---GNKIIIGSRDLE 35 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC---CCEEEEEEcCHH
Confidence 47999999999999999999987 589998888754
No 289
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=97.46 E-value=0.0003 Score=44.22 Aligned_cols=36 Identities=28% Similarity=0.226 Sum_probs=32.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.|+.||||=||.-|++|.+.|++. |+.|+.+.|+.+
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLek---GY~VhGi~Rrss 37 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEK---GYEVHGIKRRSS 37 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhc---CcEEEEEeeccc
Confidence 478999999999999999999998 789999998744
No 290
>PLN00015 protochlorophyllide reductase
Probab=97.44 E-value=0.00021 Score=44.03 Aligned_cols=31 Identities=19% Similarity=0.234 Sum_probs=27.5
Q ss_pred EEEcCCChHHHHHHHHHHhhCCCc-ceEEEEEeCC
Q psy17490 17 LVTGGTGFMGKLLIDKLLRSFPDI-GAIYIMVRDK 50 (67)
Q Consensus 17 litGa~G~iG~~l~~~l~~~~~~~-~~v~~~~r~~ 50 (67)
+||||++.||.+++++|+++ + ++|++.+|+.
T Consensus 1 lITGas~GIG~aia~~l~~~---G~~~V~~~~r~~ 32 (308)
T PLN00015 1 IITGASSGLGLATAKALAET---GKWHVVMACRDF 32 (308)
T ss_pred CEeCCCChHHHHHHHHHHHC---CCCEEEEEeCCH
Confidence 59999999999999999997 6 7898888864
No 291
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=97.42 E-value=0.00035 Score=42.81 Aligned_cols=34 Identities=21% Similarity=0.241 Sum_probs=29.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
|+|+|+||||. |+.+++.|.+. +++|++..+...
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~---g~~v~~s~~t~~ 34 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQ---GIEILVTVTTSE 34 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhC---CCeEEEEEccCC
Confidence 57999999999 99999999987 688888888654
No 292
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=97.40 E-value=0.00083 Score=37.61 Aligned_cols=37 Identities=16% Similarity=0.206 Sum_probs=32.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++|.|+|++|.+|++++..|... +-+.+++++++++.
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~-~l~~ei~L~D~~~~ 37 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQ-GLADEIVLIDINED 37 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHT-TTSSEEEEEESSHH
T ss_pred CEEEEECCCChHHHHHHHHHHhC-CCCCceEEeccCcc
Confidence 57999999999999999999987 44578999999854
No 293
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=97.38 E-value=0.00043 Score=44.53 Aligned_cols=37 Identities=27% Similarity=0.427 Sum_probs=30.4
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
..++|.|.||||++|..+++.|.++ | ..+|..+.+..
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~h-P-~~el~~l~s~~ 73 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANH-P-DFEITVMTADR 73 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhC-C-CCeEEEEEChh
Confidence 3468999999999999999999887 3 35888877653
No 294
>KOG1611|consensus
Probab=97.37 E-value=0.00049 Score=41.87 Aligned_cols=38 Identities=26% Similarity=0.421 Sum_probs=28.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.+.++||||+..||--++++|++. ++...++...|+++
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~-~~i~~iiat~r~~e 40 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKD-KGIEVIIATARDPE 40 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcC-CCcEEEEEecCChH
Confidence 356999999999999999999986 33334444445454
No 295
>KOG1207|consensus
Probab=97.35 E-value=0.00036 Score=41.35 Aligned_cols=41 Identities=20% Similarity=0.255 Sum_probs=36.2
Q ss_pred hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+.++.++.+++||+.-.||+.++..|.+. +.+|+++.|.+.
T Consensus 2 ~t~laG~~vlvTgagaGIG~~~v~~La~a---GA~ViAvaR~~a 42 (245)
T KOG1207|consen 2 KTSLAGVIVLVTGAGAGIGKEIVLSLAKA---GAQVIAVARNEA 42 (245)
T ss_pred cccccceEEEeecccccccHHHHHHHHhc---CCEEEEEecCHH
Confidence 34567899999999999999999999998 789999999865
No 296
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.31 E-value=0.0013 Score=36.40 Aligned_cols=39 Identities=21% Similarity=0.239 Sum_probs=32.8
Q ss_pred hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.+++++++|.|+ |..|+.++..|... +..+|+++.|+..
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~--g~~~i~i~nRt~~ 47 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAAL--GAKEITIVNRTPE 47 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHT--TSSEEEEEESSHH
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHc--CCCEEEEEECCHH
Confidence 467899999997 77899999999997 3457999999743
No 297
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.28 E-value=0.00075 Score=41.97 Aligned_cols=35 Identities=11% Similarity=0.004 Sum_probs=30.4
Q ss_pred ccCCeEEEEcCC--ChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490 11 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVR 48 (67)
Q Consensus 11 ~~~~~ilitGa~--G~iG~~l~~~l~~~~~~~~~v~~~~r 48 (67)
+++|+++||||. ..||+++++.|.++ |.+|++.++
T Consensus 6 ~~gk~alITGa~~~~GIG~a~A~~la~~---Ga~Vvv~~~ 42 (299)
T PRK06300 6 LTGKIAFIAGIGDDQGYGWGIAKALAEA---GATILVGTW 42 (299)
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHC---CCEEEEEec
Confidence 578999999995 89999999999998 688888654
No 298
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=97.28 E-value=0.0011 Score=41.10 Aligned_cols=37 Identities=14% Similarity=0.054 Sum_probs=30.7
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++|+|| |.+|++++..|...+ ..+|++++|+.
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G--~~~V~I~~R~~ 160 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDG--AKEITIFNIKD 160 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCC--CCEEEEEeCCc
Confidence 45789999999 799999999998872 34699999975
No 299
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.27 E-value=0.001 Score=42.16 Aligned_cols=35 Identities=26% Similarity=0.378 Sum_probs=25.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 48 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r 48 (67)
++|.|+||||++|..+++.|.++.-...++..+..
T Consensus 5 ~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s 39 (336)
T PRK05671 5 LDIAVVGATGTVGEALVQILEERDFPVGTLHLLAS 39 (336)
T ss_pred CEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEEC
Confidence 58999999999999999999964211235545543
No 300
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.22 E-value=0.001 Score=42.18 Aligned_cols=34 Identities=18% Similarity=0.297 Sum_probs=27.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
++|+|+||+|++|+.+++.|.+. |. .++..+.++
T Consensus 4 ~~V~I~GatG~iG~~l~~~L~~~-p~-~el~~~~~s 37 (349)
T PRK08664 4 LKVGILGATGMVGQRFVQLLANH-PW-FEVTALAAS 37 (349)
T ss_pred cEEEEECCCCHHHHHHHHHHHcC-CC-ceEEEEEcC
Confidence 58999999999999999999875 33 377776444
No 301
>KOG1372|consensus
Probab=97.21 E-value=0.0011 Score=41.31 Aligned_cols=49 Identities=22% Similarity=0.251 Sum_probs=40.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHHHHhhcC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 66 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~ 66 (67)
+..||||-+|-=|+++++.|+.. +++|+.+.|+.+. -...+++.+..+|
T Consensus 29 kvALITGItGQDGSYLaEfLL~K---gYeVHGiiRRsSs-FNT~RIeHlY~nP 77 (376)
T KOG1372|consen 29 KVALITGITGQDGSYLAEFLLSK---GYEVHGIIRRSSS-FNTARIEHLYSNP 77 (376)
T ss_pred eEEEEecccCCCchHHHHHHHhC---CceeeEEEeeccc-cchhhhhhhhcCc
Confidence 47899999999999999999997 7899999987652 2346777777665
No 302
>KOG2865|consensus
Probab=97.19 E-value=0.00079 Score=42.56 Aligned_cols=37 Identities=27% Similarity=0.432 Sum_probs=30.3
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.+-.+-|.|||||+|++++++|.+. +.+|++--|..+
T Consensus 60 sGiVaTVFGAtGFlGryvvnklak~---GSQviiPyR~d~ 96 (391)
T KOG2865|consen 60 SGIVATVFGATGFLGRYVVNKLAKM---GSQVIIPYRGDE 96 (391)
T ss_pred cceEEEEecccccccHHHHHHHhhc---CCeEEEeccCCc
Confidence 3445778899999999999999997 688888777543
No 303
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=97.10 E-value=0.002 Score=40.77 Aligned_cols=33 Identities=24% Similarity=0.447 Sum_probs=26.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 48 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r 48 (67)
++|+|.||+|++|+.+++.|.+. |. .++..+.+
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~~-p~-~elv~v~~ 35 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLNH-PE-VEIVAVTS 35 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHcC-CC-ceEEEEEC
Confidence 58999999999999999999876 33 46655554
No 304
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.05 E-value=0.0011 Score=42.91 Aligned_cols=35 Identities=37% Similarity=0.520 Sum_probs=30.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++|+|.|+ |+||+.++..|.++. + .+|++.+|+.+
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~-d-~~V~iAdRs~~ 36 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNG-D-GEVTIADRSKE 36 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCC-C-ceEEEEeCCHH
Confidence 57999998 999999999999973 2 79999999854
No 305
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=97.03 E-value=0.0023 Score=40.01 Aligned_cols=36 Identities=19% Similarity=0.250 Sum_probs=30.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
|+|.|+|++|++|..++..++..+ ...+|+++++.+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g-~~~~v~lvd~~~ 36 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKED-VVKEINLISRPK 36 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCC-CCCEEEEEECcc
Confidence 579999999999999999999872 224799999854
No 306
>PTZ00325 malate dehydrogenase; Provisional
Probab=97.03 E-value=0.0021 Score=40.62 Aligned_cols=39 Identities=18% Similarity=0.192 Sum_probs=31.6
Q ss_pred hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
..+.++|.|+|++|.||+.+...|... ....++.++|+.
T Consensus 5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~-~~~~elvL~Di~ 43 (321)
T PTZ00325 5 ALKMFKVAVLGAAGGIGQPLSLLLKQN-PHVSELSLYDIV 43 (321)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHhcC-CCCCEEEEEecC
Confidence 355679999999999999999988854 234689999984
No 307
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=97.01 E-value=0.0025 Score=40.41 Aligned_cols=33 Identities=24% Similarity=0.498 Sum_probs=25.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEE-EEEe
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIY-IMVR 48 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~-~~~r 48 (67)
++|.|.||||++|..+++.|.+. |. .++. ++++
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~h-P~-~el~~l~~s 34 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNH-PE-VEITYLVSS 34 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcC-CC-ceEEEEecc
Confidence 47999999999999999999876 44 4666 4343
No 308
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=96.99 E-value=0.003 Score=40.15 Aligned_cols=37 Identities=30% Similarity=0.600 Sum_probs=28.1
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhh-CCCcceEEEEEeC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRS-FPDIGAIYIMVRD 49 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~-~~~~~~v~~~~r~ 49 (67)
+..+|.|.||||++|..+++.|.++ .|. .++..+...
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~-~~l~~laS~ 40 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPV-GELYALASE 40 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCc-eEEEEEEcc
Confidence 4568999999999999999998884 233 466655543
No 309
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.94 E-value=0.002 Score=42.09 Aligned_cols=35 Identities=31% Similarity=0.338 Sum_probs=30.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
|+|.|+||+|.+|..++..|.+. ++.|++.+|++.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~---G~~V~v~~r~~~ 35 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEK---GFEVIVTGRDPK 35 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHC---CCEEEEEECChH
Confidence 47999999999999999999887 578999998754
No 310
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.92 E-value=0.003 Score=38.81 Aligned_cols=38 Identities=26% Similarity=0.332 Sum_probs=31.8
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++|+|+ |.+|+.++..|...+ ..+|++++|+..
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g--~~~V~v~~R~~~ 158 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLG--VAEITIVNRTVE 158 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcC--CCEEEEEeCCHH
Confidence 45788999987 999999999999872 368999999754
No 311
>PLN00106 malate dehydrogenase
Probab=96.91 E-value=0.004 Score=39.38 Aligned_cols=37 Identities=16% Similarity=0.176 Sum_probs=30.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
..+|.|+|++|.||+.+...|..+ +-..++.+++..+
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~-~~~~el~L~Di~~ 54 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMN-PLVSELHLYDIAN 54 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC-CCCCEEEEEecCC
Confidence 358999999999999999998865 2346899999866
No 312
>KOG1200|consensus
Probab=96.89 E-value=0.004 Score=37.55 Aligned_cols=41 Identities=17% Similarity=0.163 Sum_probs=35.0
Q ss_pred hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.+.+..+..+||||+..||+++++.|.+. +.+|.+.+++..
T Consensus 9 ~~r~~sk~~~vtGg~sGIGrAia~~la~~---Garv~v~dl~~~ 49 (256)
T KOG1200|consen 9 VQRLMSKVAAVTGGSSGIGRAIAQLLAKK---GARVAVADLDSA 49 (256)
T ss_pred HHHHhcceeEEecCCchHHHHHHHHHHhc---CcEEEEeecchh
Confidence 44566788999999999999999999997 789999888654
No 313
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=96.88 E-value=0.0028 Score=41.00 Aligned_cols=37 Identities=19% Similarity=0.350 Sum_probs=31.7
Q ss_pred ccCCeEEEEcC----------------CChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGG----------------TGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa----------------~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++|||| +|.+|..+++.+..+ |.+|+++.++.
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~---Ga~V~~~~g~~ 235 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKR---GADVTLITGPV 235 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHC---CCEEEEeCCCC
Confidence 67899999998 468999999999998 78998887653
No 314
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=96.85 E-value=0.0033 Score=39.85 Aligned_cols=35 Identities=20% Similarity=0.381 Sum_probs=24.7
Q ss_pred eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+|+|.||+|++|..+++.|.++.-...++..+.+.
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~ 35 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASD 35 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEecc
Confidence 47899999999999999988741112344444454
No 315
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.84 E-value=0.004 Score=36.74 Aligned_cols=37 Identities=19% Similarity=0.224 Sum_probs=31.3
Q ss_pred hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.+++|+++|+|. |-+|+++++.|.+. +++|++.++++
T Consensus 25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~---G~~Vvv~D~~~ 61 (200)
T cd01075 25 SLEGKTVAVQGL-GKVGYKLAEHLLEE---GAKLIVADINE 61 (200)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHC---CCEEEEEcCCH
Confidence 367899999988 68999999999987 68999887764
No 316
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=96.83 E-value=0.006 Score=38.85 Aligned_cols=35 Identities=14% Similarity=0.234 Sum_probs=25.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV 47 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~ 47 (67)
.++|.|.||+|++|..+++.|.++.-...++..+.
T Consensus 7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~la 41 (344)
T PLN02383 7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLA 41 (344)
T ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEE
Confidence 46899999999999999999887421123454444
No 317
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.80 E-value=0.0045 Score=35.78 Aligned_cols=37 Identities=19% Similarity=0.315 Sum_probs=32.0
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++|.|+.+++|.-+++.|.+. +.+|+++.|..
T Consensus 42 l~gk~vlViG~G~~~G~~~a~~L~~~---g~~V~v~~r~~ 78 (168)
T cd01080 42 LAGKKVVVVGRSNIVGKPLAALLLNR---NATVTVCHSKT 78 (168)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhC---CCEEEEEECCc
Confidence 67899999999888999999999987 45788888864
No 318
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=96.79 E-value=0.0034 Score=48.33 Aligned_cols=37 Identities=22% Similarity=0.150 Sum_probs=32.4
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
.++++++||||++.||..++++|.++. +.+|++++|+
T Consensus 1995 ~~g~vvLVTGGarGIG~aiA~~LA~~~--ga~viL~gRs 2031 (2582)
T TIGR02813 1995 NSDDVFLVTGGAKGVTFECALELAKQC--QAHFILAGRS 2031 (2582)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHhc--CCEEEEEeCC
Confidence 357899999999999999999999872 4689999997
No 319
>PRK06849 hypothetical protein; Provisional
Probab=96.77 E-value=0.0046 Score=39.42 Aligned_cols=37 Identities=14% Similarity=0.055 Sum_probs=32.5
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+.|+|||||+...+|-.+++.|.+. |++|++++..+.
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~---G~~Vi~~d~~~~ 39 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNA---GHTVILADSLKY 39 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCch
Confidence 4689999999999999999999997 789999887653
No 320
>KOG1478|consensus
Probab=96.77 E-value=0.0069 Score=37.86 Aligned_cols=24 Identities=25% Similarity=0.322 Sum_probs=22.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSF 37 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~ 37 (67)
|.++|||++..+|-.++..|++..
T Consensus 4 KvalITGanSglGl~i~~RLl~~~ 27 (341)
T KOG1478|consen 4 KVALITGANSGLGLAICKRLLAED 27 (341)
T ss_pred eEEEEecCCCcccHHHHHHHHhcc
Confidence 579999999999999999999974
No 321
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.76 E-value=0.0037 Score=40.39 Aligned_cols=36 Identities=17% Similarity=0.193 Sum_probs=31.8
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++|+|+.+ +|..+++.|++. ++.|++.++..
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~---G~~V~~~d~~~ 38 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKL---GAKVILTDEKE 38 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHC---CCEEEEEeCCc
Confidence 4678999999888 999999999998 78999998864
No 322
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=96.74 E-value=0.0035 Score=40.12 Aligned_cols=35 Identities=26% Similarity=0.414 Sum_probs=31.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.++|.|.||.|.+|..++..|.+. ++.|++.+|+.
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~---G~~V~~~d~~~ 132 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLS---GYQVRILEQDD 132 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHC---CCeEEEeCCCc
Confidence 368999999999999999999997 68899999864
No 323
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=96.73 E-value=0.0046 Score=39.11 Aligned_cols=31 Identities=23% Similarity=0.391 Sum_probs=24.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEE
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM 46 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~ 46 (67)
++|.|+|++|++|+++++.|.++ +. .+|..+
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~-~~-~~l~~v 31 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKH-PY-FELAKV 31 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CC-ceEEEE
Confidence 37999999999999999988775 33 356555
No 324
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.72 E-value=0.007 Score=33.11 Aligned_cols=36 Identities=22% Similarity=0.429 Sum_probs=28.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
++|.|.|++|-.|+.+++.+.+. ++..-+-+++|++
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~-~~~~lv~~v~~~~ 36 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILES-PGFELVGAVDRKP 36 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS-TTEEEEEEEETTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhc-CCcEEEEEEecCC
Confidence 47999999999999999999995 3333455566665
No 325
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.68 E-value=0.0059 Score=36.11 Aligned_cols=35 Identities=17% Similarity=0.309 Sum_probs=30.3
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++++++|.|| |-+|...++.|++. +.+|+++++.
T Consensus 8 l~~k~vLVIGg-G~va~~ka~~Ll~~---ga~V~VIs~~ 42 (202)
T PRK06718 8 LSNKRVVIVGG-GKVAGRRAITLLKY---GAHIVVISPE 42 (202)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHC---CCeEEEEcCC
Confidence 67899999988 88999999999997 5789888754
No 326
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.65 E-value=0.0063 Score=33.78 Aligned_cols=38 Identities=18% Similarity=0.221 Sum_probs=31.2
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.++++++|+|+ |.+|..+++.|.+.. ++.|++.+|++.
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g--~~~v~v~~r~~~ 54 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELG--AAKIVIVNRTLE 54 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCC--CCEEEEEcCCHH
Confidence 45789999987 999999999998862 368999888754
No 327
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=96.58 E-value=0.0051 Score=38.21 Aligned_cols=34 Identities=18% Similarity=0.341 Sum_probs=30.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++|.|+| .|++|..++..|+.. +++|++.+|++.
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~---G~~V~v~d~~~~ 36 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARA---GHEVRLWDADPA 36 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHC---CCeeEEEeCCHH
Confidence 4789998 999999999999997 689999999754
No 328
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.55 E-value=0.0098 Score=37.55 Aligned_cols=35 Identities=20% Similarity=0.288 Sum_probs=28.4
Q ss_pred eEEEEcCCChHHHHHHHHHHhhCCCcc-----eEEEEEeCC
Q psy17490 15 QILVTGGTGFMGKLLIDKLLRSFPDIG-----AIYIMVRDK 50 (67)
Q Consensus 15 ~ilitGa~G~iG~~l~~~l~~~~~~~~-----~v~~~~r~~ 50 (67)
+|.|+||+|.+|+.++..|...+ -.. +++++++++
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~-~~~~~~~~~l~L~Di~~ 41 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGE-LFGDDQPVILHLLDIPP 41 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCC-ccCCCCceEEEEEecCC
Confidence 68999999999999999888752 112 589999876
No 329
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=96.52 E-value=0.015 Score=37.90 Aligned_cols=34 Identities=12% Similarity=0.107 Sum_probs=28.1
Q ss_pred cCCeEEEEcCCChHHHH--HHHHHHhhCCCcceEEEEEeC
Q psy17490 12 RDGQILVTGGTGFMGKL--LIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~--l~~~l~~~~~~~~~v~~~~r~ 49 (67)
.+|++||||+++.+|.+ +++.| .. +..++++++.
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~---GA~Vi~v~~~ 75 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GA---GADTLGVFFE 75 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-Hc---CCeEEEEecC
Confidence 45899999999999999 78888 65 6777777753
No 330
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=96.49 E-value=0.01 Score=36.00 Aligned_cols=40 Identities=20% Similarity=0.272 Sum_probs=32.6
Q ss_pred hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+..+++++|+|.|+ |.+|+.+++.|...+ ..+++++|.+.
T Consensus 27 Q~~L~~~~VliiG~-GglGs~va~~La~~G--vg~i~lvD~D~ 66 (245)
T PRK05690 27 QEKLKAARVLVVGL-GGLGCAASQYLAAAG--VGTLTLVDFDT 66 (245)
T ss_pred HHHhcCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCE
Confidence 34567789999988 889999999999973 56899888753
No 331
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=96.48 E-value=0.0079 Score=35.43 Aligned_cols=39 Identities=21% Similarity=0.409 Sum_probs=32.3
Q ss_pred hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
.+.+++.+|+|.|..| +|.++++.|... +..+++++|.+
T Consensus 14 q~~L~~s~VlviG~gg-lGsevak~L~~~--GVg~i~lvD~d 52 (198)
T cd01485 14 QNKLRSAKVLIIGAGA-LGAEIAKNLVLA--GIDSITIVDHR 52 (198)
T ss_pred HHHHhhCcEEEECCCH-HHHHHHHHHHHc--CCCEEEEEECC
Confidence 4456778999998887 999999999997 35789998875
No 332
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.46 E-value=0.0096 Score=38.45 Aligned_cols=37 Identities=16% Similarity=0.131 Sum_probs=31.3
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++|+|+.| +|...++.|++. +..|++.++...
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~---G~~V~~~d~~~~ 39 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKL---GANVTVNDGKPF 39 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHC---CCEEEEEcCCCc
Confidence 4678999999988 999999998887 689999887643
No 333
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=96.46 E-value=0.0043 Score=36.00 Aligned_cols=33 Identities=21% Similarity=0.318 Sum_probs=27.5
Q ss_pred eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+|.|.|+ |.+|+.++..++.. +++|+++++++.
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~---G~~V~l~d~~~~ 33 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARA---GYEVTLYDRSPE 33 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHT---TSEEEEE-SSHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhC---CCcEEEEECChH
Confidence 4788887 99999999999997 789999999765
No 334
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.45 E-value=0.011 Score=37.30 Aligned_cols=35 Identities=20% Similarity=0.177 Sum_probs=28.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
++|.|+|++|.+|+.++..|..+ +-..++.+++.+
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~-~~~~elvLiDi~ 35 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLN-PLVSELALYDIV 35 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCCcEEEEEecC
Confidence 47999999999999999988775 233588888876
No 335
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.44 E-value=0.0064 Score=39.19 Aligned_cols=34 Identities=21% Similarity=0.390 Sum_probs=29.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
|+++|.|+ |.+|+++++.|.++ ++.|+++++++.
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~---g~~v~vid~~~~ 34 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGE---NNDVTVIDTDEE 34 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhC---CCcEEEEECCHH
Confidence 57899987 99999999999887 578999988654
No 336
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.44 E-value=0.0077 Score=38.32 Aligned_cols=34 Identities=26% Similarity=0.365 Sum_probs=25.9
Q ss_pred EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
|+|.|+ |++|+.+++.|.+.. ...+|++.+|+..
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~-~~~~v~va~r~~~ 34 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRG-PFEEVTVADRNPE 34 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTT-CE-EEEEEESSHH
T ss_pred CEEEcC-cHHHHHHHHHHhcCC-CCCcEEEEECCHH
Confidence 789999 999999999999973 2228999999754
No 337
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=96.42 E-value=0.02 Score=36.23 Aligned_cols=36 Identities=19% Similarity=0.268 Sum_probs=29.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcc-----eEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIG-----AIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~-----~v~~~~r~~ 50 (67)
.+|.|+|++|.+|+.++..|+... -.. +++++|..+
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~~~~-~~~~~~~~el~L~Di~~ 44 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIASGE-LFGKDQPVVLHLLDIPP 44 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHHhCC-cccCCCccEEEEEecCC
Confidence 479999999999999999988762 234 799999865
No 338
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=96.41 E-value=0.0087 Score=40.03 Aligned_cols=36 Identities=22% Similarity=0.154 Sum_probs=30.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++|+|+ |.+|+.++..|.+. +.+|++++|+.
T Consensus 377 ~~~k~vlIlGa-GGagrAia~~L~~~---G~~V~i~nR~~ 412 (529)
T PLN02520 377 LAGKLFVVIGA-GGAGKALAYGAKEK---GARVVIANRTY 412 (529)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHC---CCEEEEEcCCH
Confidence 45789999999 79999999999997 45899888863
No 339
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.39 E-value=0.0093 Score=37.65 Aligned_cols=38 Identities=18% Similarity=0.279 Sum_probs=30.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcc-----eEEEEEeCCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIG-----AIYIMVRDKK 51 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~-----~v~~~~r~~~ 51 (67)
.++|.|+|++|.+|..++..|+... -.. ++.++|..+.
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~-~~~~~~~~el~L~Di~~~ 44 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGE-MFGPDQPVILQLLELPQA 44 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhcc-ccCCCCceEEEEEecCCc
Confidence 3589999999999999999988752 224 7899998543
No 340
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.36 E-value=0.011 Score=36.75 Aligned_cols=36 Identities=19% Similarity=0.279 Sum_probs=31.2
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++++++|.|++|.+|+.++..|+.. +..|++..|.
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~---gatVtv~~~~ 192 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNA---NATVTICHSR 192 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhC---CCEEEEEeCC
Confidence 67899999999999999999999887 4588887773
No 341
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=96.33 E-value=0.013 Score=37.28 Aligned_cols=40 Identities=28% Similarity=0.498 Sum_probs=32.5
Q ss_pred hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
++.++.++|+|.|+ |.+|++++..|...+ ..+|+++|.+.
T Consensus 19 Q~~L~~~~VlVvG~-GglGs~va~~La~aG--vg~i~lvD~D~ 58 (339)
T PRK07688 19 QQKLREKHVLIIGA-GALGTANAEMLVRAG--VGKVTIVDRDY 58 (339)
T ss_pred HHHhcCCcEEEECC-CHHHHHHHHHHHHcC--CCeEEEEeCCc
Confidence 34567788999977 889999999999973 45899999863
No 342
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.33 E-value=0.011 Score=31.31 Aligned_cols=35 Identities=20% Similarity=0.350 Sum_probs=29.2
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++++++|.|+ |-+|.+=++.|++. +.+|++++..
T Consensus 5 l~~~~vlVvGg-G~va~~k~~~Ll~~---gA~v~vis~~ 39 (103)
T PF13241_consen 5 LKGKRVLVVGG-GPVAARKARLLLEA---GAKVTVISPE 39 (103)
T ss_dssp -TT-EEEEEEE-SHHHHHHHHHHCCC---TBEEEEEESS
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhC---CCEEEEECCc
Confidence 56889999988 88999999999997 5799998876
No 343
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=96.30 E-value=0.014 Score=35.74 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=30.3
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++++++|+|+ |.+|+.++..|.+. +.+|++.+|+..
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~---g~~v~v~~R~~~ 151 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKA---DCNVIIANRTVS 151 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 4678999998 79999999999986 468999888753
No 344
>PRK06444 prephenate dehydrogenase; Provisional
Probab=96.30 E-value=0.0095 Score=35.30 Aligned_cols=28 Identities=21% Similarity=0.309 Sum_probs=24.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEE
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIY 44 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~ 44 (67)
+++.|.||+|-+|++++..|.+. ++.|+
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~~---g~~v~ 28 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDDN---GLGVY 28 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHhC---CCEEE
Confidence 47999999999999999999886 56665
No 345
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=96.27 E-value=0.013 Score=36.34 Aligned_cols=36 Identities=11% Similarity=0.101 Sum_probs=29.2
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.+.+++|+||+|.+|..+++.+... +.+|+++++++
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~---G~~Vi~~~~~~ 186 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLK---GCYVVGSAGSD 186 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHc---CCEEEEEeCCH
Confidence 4679999999999999999877766 56788777653
No 346
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=96.25 E-value=0.014 Score=35.57 Aligned_cols=36 Identities=22% Similarity=0.245 Sum_probs=30.3
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.+.+++|+||+|.+|..+++.+... +..|+++++++
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~---g~~v~~~~~~~ 197 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKAL---GARVIAVTRSP 197 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc---CCeEEEEeCCH
Confidence 4678999999999999999998886 56888887754
No 347
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=96.24 E-value=0.013 Score=34.56 Aligned_cols=39 Identities=28% Similarity=0.424 Sum_probs=31.9
Q ss_pred hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
++.+++++|+|.|+.| +|.++++.|...+ ..+++++|.+
T Consensus 16 Q~~L~~s~VlIiG~gg-lG~evak~La~~G--Vg~i~lvD~d 54 (197)
T cd01492 16 QKRLRSARILLIGLKG-LGAEIAKNLVLSG--IGSLTILDDR 54 (197)
T ss_pred HHHHHhCcEEEEcCCH-HHHHHHHHHHHcC--CCEEEEEECC
Confidence 4457788999998666 9999999999973 5789998875
No 348
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=96.22 E-value=0.014 Score=36.26 Aligned_cols=37 Identities=14% Similarity=0.222 Sum_probs=31.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+.+++++|+|. |.+|+.+++.|... +.+|++.+|++.
T Consensus 149 l~gk~v~IiG~-G~iG~avA~~L~~~---G~~V~v~~R~~~ 185 (287)
T TIGR02853 149 IHGSNVMVLGF-GRTGMTIARTFSAL---GARVFVGARSSA 185 (287)
T ss_pred CCCCEEEEEcC-hHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 56789999988 77999999999987 568999998754
No 349
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=96.22 E-value=0.022 Score=34.21 Aligned_cols=34 Identities=24% Similarity=0.234 Sum_probs=28.6
Q ss_pred eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.+..++|+|-+|+.+...|... +++|++-+|+.+
T Consensus 2 ~~~~i~GtGniG~alA~~~a~a---g~eV~igs~r~~ 35 (211)
T COG2085 2 MIIAIIGTGNIGSALALRLAKA---GHEVIIGSSRGP 35 (211)
T ss_pred cEEEEeccChHHHHHHHHHHhC---CCeEEEecCCCh
Confidence 4567789999999999999998 689988876654
No 350
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=96.21 E-value=0.015 Score=36.69 Aligned_cols=34 Identities=18% Similarity=0.388 Sum_probs=26.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
.+|.|.||+|++|..+++.|.++ |.. ++..+..+
T Consensus 3 ~~VaIvGAtGy~G~eLlrlL~~h-p~~-~l~~~~s~ 36 (313)
T PRK11863 3 PKVFIDGEAGTTGLQIRERLAGR-SDI-ELLSIPEA 36 (313)
T ss_pred cEEEEECCCCHHHHHHHHHHhcC-CCe-EEEEEecC
Confidence 47999999999999999998887 433 55555443
No 351
>PRK05442 malate dehydrogenase; Provisional
Probab=96.19 E-value=0.017 Score=36.57 Aligned_cols=37 Identities=19% Similarity=0.280 Sum_probs=29.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcc-----eEEEEEeCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIG-----AIYIMVRDK 50 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~-----~v~~~~r~~ 50 (67)
.++|.|+|++|.+|+.++..|.... -.. ++.++|..+
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~-~~~~~~~~el~LiDi~~ 45 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGD-MLGKDQPVILQLLEIPP 45 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhh-hcCCCCccEEEEEecCC
Confidence 4689999999999999999887742 123 789998854
No 352
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=96.17 E-value=0.019 Score=36.79 Aligned_cols=35 Identities=20% Similarity=0.414 Sum_probs=25.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCc--ceEEEEEe
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDI--GAIYIMVR 48 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~--~~v~~~~r 48 (67)
..+|.|.||||++|+.+++.|.+. +.. .++..+..
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~h-~~f~v~~l~~~aS 41 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEKE-TKFNIAEVTLLSS 41 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHC-CCCCcccEEEEEC
Confidence 468999999999999999998854 222 23555544
No 353
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=96.17 E-value=0.023 Score=34.67 Aligned_cols=36 Identities=25% Similarity=0.392 Sum_probs=26.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
++|.|+|++|.+|+.+++.+.+. ++..-+.++++++
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~-~~~elvav~d~~~ 37 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAA-EDLELVAAVDRPG 37 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCC
Confidence 57999999999999999888764 3333344455554
No 354
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=96.15 E-value=0.013 Score=37.09 Aligned_cols=31 Identities=19% Similarity=0.441 Sum_probs=25.0
Q ss_pred eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE
Q psy17490 15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV 47 (67)
Q Consensus 15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~ 47 (67)
+|.|.||+||.|..+++.|... |.. ++..+.
T Consensus 3 ~v~IvGasGy~G~el~rlL~~H-P~~-el~~l~ 33 (310)
T TIGR01851 3 KVFIDGEAGTTGLQIRERLSGR-DDI-ELLSIA 33 (310)
T ss_pred eEEEECCCChhHHHHHHHHhCC-CCe-EEEEEe
Confidence 6899999999999999999997 554 444443
No 355
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=96.15 E-value=0.043 Score=34.52 Aligned_cols=38 Identities=16% Similarity=0.295 Sum_probs=30.9
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++++|.|+|+ |.+|..++..|+.. +-..++.+++++.+
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~-~~~~el~L~D~~~~ 42 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQ-GIADELVIIDINKE 42 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhc-CCCCEEEEEeCCCc
Confidence 3568999998 99999999998876 23358999998655
No 356
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=96.13 E-value=0.019 Score=36.67 Aligned_cols=36 Identities=19% Similarity=0.344 Sum_probs=28.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
++|.|.||||.+|+.+++.|.++.+....+.++...
T Consensus 2 ~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~ 37 (334)
T COG0136 2 LNVAVLGATGAVGQVLLELLEERHFPFEELVLLASA 37 (334)
T ss_pred cEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecc
Confidence 579999999999999999999965555555555543
No 357
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=96.10 E-value=0.025 Score=31.54 Aligned_cols=34 Identities=24% Similarity=0.400 Sum_probs=27.8
Q ss_pred EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
|.|.|+||-||+..++-+.+. |+-.+|+.++-..
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~-~d~f~v~~Lsa~~ 34 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKH-PDKFEVVALSAGS 34 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHC-TTTEEEEEEEESS
T ss_pred CEEEcCCcHHHHHHHHHHHhC-CCceEEEEEEcCC
Confidence 579999999999999998876 4456888887653
No 358
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.10 E-value=0.016 Score=36.43 Aligned_cols=38 Identities=16% Similarity=0.283 Sum_probs=33.2
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+.+++|.|.|.+|.+|+-++..|+++ ++.|++..+...
T Consensus 157 l~Gk~V~vIG~s~ivG~PmA~~L~~~---gatVtv~~~~t~ 194 (301)
T PRK14194 157 LTGKHAVVIGRSNIVGKPMAALLLQA---HCSVTVVHSRST 194 (301)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHC---CCEEEEECCCCC
Confidence 67899999999999999999999997 689998866543
No 359
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=96.09 E-value=0.012 Score=37.78 Aligned_cols=35 Identities=20% Similarity=0.465 Sum_probs=27.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.++.|.||+||.|..|++.|..+ |+. +++..+.+.
T Consensus 3 ~kV~IvGasGYtG~EL~rlL~~H-p~v-e~~~~ss~~ 37 (349)
T COG0002 3 IKVGIVGASGYTGLELLRLLAGH-PDV-ELILISSRE 37 (349)
T ss_pred ceEEEEcCCCCcHHHHHHHHhcC-CCe-EEEEeechh
Confidence 58999999999999999999997 554 455555433
No 360
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.09 E-value=0.019 Score=36.06 Aligned_cols=37 Identities=22% Similarity=0.327 Sum_probs=32.1
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE-eCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV-RDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~-r~~ 50 (67)
+++++|+|.|.++.+|+-++..|+++ ++.|++.. |.+
T Consensus 156 ~~Gk~V~viGrs~~mG~PmA~~L~~~---g~tVtv~~~rT~ 193 (296)
T PRK14188 156 LSGLNAVVIGRSNLVGKPMAQLLLAA---NATVTIAHSRTR 193 (296)
T ss_pred CCCCEEEEEcCCcchHHHHHHHHHhC---CCEEEEECCCCC
Confidence 67899999999999999999999987 67888884 543
No 361
>KOG1209|consensus
Probab=96.09 E-value=0.018 Score=35.26 Aligned_cols=36 Identities=25% Similarity=0.397 Sum_probs=30.2
Q ss_pred CCeEEEEc-CCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 13 DGQILVTG-GTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 13 ~~~ilitG-a~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.+.|+||| +.|.||.+++++|.+. |+.|++.+|+-+
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~---G~~V~AtaR~~e 43 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARN---GYLVYATARRLE 43 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhC---CeEEEEEccccc
Confidence 46788886 6789999999999997 789999998754
No 362
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.05 E-value=0.023 Score=35.54 Aligned_cols=37 Identities=16% Similarity=0.275 Sum_probs=32.2
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++|+|+++.+|+-+...|+.. +..|+++.+..
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~~~---gatVtv~~s~t 192 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLLQK---NASVTILHSRS 192 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHC---CCeEEEEeCCc
Confidence 67899999999999999999999987 57888877653
No 363
>KOG1210|consensus
Probab=96.00 E-value=0.0093 Score=37.86 Aligned_cols=36 Identities=31% Similarity=0.354 Sum_probs=32.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG 52 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~ 52 (67)
.+++|||++..+|..++..+..+ ++.|+++.|+...
T Consensus 34 ~hi~itggS~glgl~la~e~~~~---ga~Vti~ar~~~k 69 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKRE---GADVTITARSGKK 69 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHc---cCceEEEeccHHH
Confidence 48999999999999999999997 7899999998653
No 364
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.00 E-value=0.026 Score=33.25 Aligned_cols=40 Identities=23% Similarity=0.302 Sum_probs=32.3
Q ss_pred hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+..+++++|+|.| .|.+|+++++.|...+ ..+++++|.+.
T Consensus 16 q~kl~~~~VlviG-~GglGs~ia~~La~~G--v~~i~lvD~d~ 55 (202)
T TIGR02356 16 QQRLLNSHVLIIG-AGGLGSPAALYLAGAG--VGTIVIVDDDH 55 (202)
T ss_pred HHHhcCCCEEEEC-CCHHHHHHHHHHHHcC--CCeEEEecCCE
Confidence 4557788999997 6778999999999973 46899998863
No 365
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.00 E-value=0.017 Score=36.68 Aligned_cols=40 Identities=30% Similarity=0.478 Sum_probs=32.4
Q ss_pred hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
++.+++++|+|.|+ |.+|+++++.|...+ ..+++++|++.
T Consensus 19 Q~~L~~~~VlIiG~-GglGs~va~~La~aG--vg~i~lvD~D~ 58 (338)
T PRK12475 19 QRKIREKHVLIVGA-GALGAANAEALVRAG--IGKLTIADRDY 58 (338)
T ss_pred HHhhcCCcEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCc
Confidence 44577889999986 668999999999972 45899999864
No 366
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=96.00 E-value=0.029 Score=32.94 Aligned_cols=37 Identities=19% Similarity=0.353 Sum_probs=26.4
Q ss_pred ccCCeEEEEc----------------CCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTG----------------GTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitG----------------a~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++||||+ ++|..|.++++++..+ |++|+++..+.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~---Ga~V~li~g~~ 53 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARR---GAEVTLIHGPS 53 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHT---T-EEEEEE-TT
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHC---CCEEEEEecCc
Confidence 3567777774 4799999999999998 78999988763
No 367
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=95.99 E-value=0.037 Score=31.90 Aligned_cols=38 Identities=18% Similarity=0.139 Sum_probs=31.3
Q ss_pred hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.+.++++.|. |.|-||+.+++.+... +.+|+..+|...
T Consensus 33 ~l~g~tvgIi-G~G~IG~~vA~~l~~f---G~~V~~~d~~~~ 70 (178)
T PF02826_consen 33 ELRGKTVGII-GYGRIGRAVARRLKAF---GMRVIGYDRSPK 70 (178)
T ss_dssp -STTSEEEEE-STSHHHHHHHHHHHHT---T-EEEEEESSCH
T ss_pred ccCCCEEEEE-EEcCCcCeEeeeeecC---CceeEEecccCC
Confidence 3568899999 5599999999999987 679999999765
No 368
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=95.98 E-value=0.021 Score=36.03 Aligned_cols=35 Identities=20% Similarity=0.230 Sum_probs=29.0
Q ss_pred eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+|.|+|++|.+|+.++..|... .-+.++.++|.++
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~-~~~~elvL~Di~~ 35 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQ-PYVSELSLYDIAG 35 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhC-CCCcEEEEecCCC
Confidence 4889999999999999988776 3346899998865
No 369
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=95.97 E-value=0.038 Score=28.22 Aligned_cols=35 Identities=20% Similarity=0.222 Sum_probs=29.5
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 48 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r 48 (67)
+.+++++|.|+ |.+|+.++..+.+.. +.+|++.+|
T Consensus 21 ~~~~~v~i~G~-G~~g~~~a~~l~~~~--~~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLGA-GEVGKGIAKLLADEG--GKKVVLCDR 55 (86)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcC
Confidence 56789999999 999999999999872 467888777
No 370
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=95.95 E-value=0.024 Score=34.67 Aligned_cols=36 Identities=14% Similarity=0.118 Sum_probs=29.2
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.+.+++|.||+|.+|..+++.+... +.+|+++++++
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~---G~~vi~~~~s~ 178 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIK---GCKVIGCAGSD 178 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHc---CCEEEEEeCCH
Confidence 4679999999999999998887776 56788777653
No 371
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.95 E-value=0.062 Score=35.17 Aligned_cols=36 Identities=19% Similarity=0.266 Sum_probs=29.8
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++|.|+ |.+|..++..|.++ +.+|+++++.+
T Consensus 14 ~~~~~v~viG~-G~~G~~~A~~L~~~---G~~V~~~d~~~ 49 (480)
T PRK01438 14 WQGLRVVVAGL-GVSGFAAADALLEL---GARVTVVDDGD 49 (480)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHC---CCEEEEEeCCc
Confidence 56788999986 88999999888876 67899988654
No 372
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.93 E-value=0.025 Score=33.47 Aligned_cols=40 Identities=20% Similarity=0.259 Sum_probs=32.0
Q ss_pred hhhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 7 ~~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
..+.++.++|+|.|+ |.+|+.++..|...+ ..+|+++|.+
T Consensus 15 ~q~~L~~~~V~IvG~-GglGs~ia~~La~~G--vg~i~lvD~D 54 (200)
T TIGR02354 15 IVQKLEQATVAICGL-GGLGSNVAINLARAG--IGKLILVDFD 54 (200)
T ss_pred HHHHHhCCcEEEECc-CHHHHHHHHHHHHcC--CCEEEEECCC
Confidence 345577889999977 668999999999972 4579999887
No 373
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=95.93 E-value=0.021 Score=34.96 Aligned_cols=34 Identities=21% Similarity=0.301 Sum_probs=28.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
|+|+|.|+ |-+|..+...|.+. +++|++++|+++
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~---g~~V~~~~r~~~ 34 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQA---GHDVTLVARRGA 34 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhC---CCeEEEEECChH
Confidence 46889986 99999999999886 689999998643
No 374
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=95.91 E-value=0.028 Score=34.64 Aligned_cols=36 Identities=8% Similarity=0.047 Sum_probs=28.9
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.+.+++|+||+|.+|..+++.+... +.+|+++++++
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~---G~~Vi~~~~s~ 173 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLK---GCKVVGAAGSD 173 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHc---CCEEEEEeCCH
Confidence 4678999999999999998877665 56788777653
No 375
>PLN02256 arogenate dehydrogenase
Probab=95.87 E-value=0.025 Score=35.42 Aligned_cols=36 Identities=19% Similarity=0.319 Sum_probs=30.2
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.+.++|.|.| .|.+|..++..|.+. +.+|+++++++
T Consensus 34 ~~~~kI~IIG-~G~mG~slA~~L~~~---G~~V~~~d~~~ 69 (304)
T PLN02256 34 SRKLKIGIVG-FGNFGQFLAKTFVKQ---GHTVLATSRSD 69 (304)
T ss_pred CCCCEEEEEe-eCHHHHHHHHHHHhC---CCEEEEEECcc
Confidence 4567899998 799999999999876 46898888874
No 376
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=95.86 E-value=0.02 Score=35.41 Aligned_cols=34 Identities=15% Similarity=0.052 Sum_probs=28.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcc-eEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~-~v~~~~r~~ 50 (67)
.+++|+||+|.+|...++.+... +. +|+++++++
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~---G~~~Vi~~~~s~ 190 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLL---GCSRVVGICGSD 190 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHc---CCCEEEEEcCCH
Confidence 79999999999999999877765 55 788877653
No 377
>PRK08818 prephenate dehydrogenase; Provisional
Probab=95.84 E-value=0.049 Score=35.19 Aligned_cols=37 Identities=14% Similarity=0.080 Sum_probs=30.9
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
...+|.|.|.+|.+|.++.+.|.+.. +.+|+.+++..
T Consensus 3 ~~~~I~IIGl~GliGgslA~alk~~~--~~~V~g~D~~d 39 (370)
T PRK08818 3 AQPVVGIVGSAGAYGRWLARFLRTRM--QLEVIGHDPAD 39 (370)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcC--CCEEEEEcCCc
Confidence 45689999999999999999998752 56899988753
No 378
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=95.83 E-value=0.041 Score=29.62 Aligned_cols=33 Identities=24% Similarity=0.534 Sum_probs=25.3
Q ss_pred eEEEEcCCChHHHHHHHHHHhhCCCcceEEEE-EeC
Q psy17490 15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-VRD 49 (67)
Q Consensus 15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~-~r~ 49 (67)
++.|+|++|.+|..+++.+.+. ++ .++..+ +++
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~-~~-~~l~av~~~~ 34 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEH-PD-FEVVALAASA 34 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcC-CC-ceEEEEEech
Confidence 4789999999999999998885 23 456665 443
No 379
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=95.78 E-value=0.024 Score=35.72 Aligned_cols=33 Identities=21% Similarity=0.243 Sum_probs=26.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 48 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r 48 (67)
+.++||+||+|.+|...++.+... +..+++...
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~---G~~~v~~~~ 175 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKAL---GATVVAVVS 175 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHc---CCcEEEEec
Confidence 689999999999999999988887 434444443
No 380
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=95.77 E-value=0.027 Score=35.62 Aligned_cols=37 Identities=19% Similarity=0.208 Sum_probs=28.0
Q ss_pred eEEEEcCCChHHHHHHHHHHhhCCC----cceEEEEEeCCC
Q psy17490 15 QILVTGGTGFMGKLLIDKLLRSFPD----IGAIYIMVRDKK 51 (67)
Q Consensus 15 ~ilitGa~G~iG~~l~~~l~~~~~~----~~~v~~~~r~~~ 51 (67)
+|.|+|++|.+|+.++..|....-. -.+++++|+.+.
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~ 41 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPA 41 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCc
Confidence 4899999999999999998874210 116889998544
No 381
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional
Probab=95.66 E-value=0.036 Score=35.35 Aligned_cols=32 Identities=22% Similarity=0.267 Sum_probs=27.6
Q ss_pred eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+|+|+| .|++|..++.+|.+. +.+|++++|..
T Consensus 3 ~vvIIG-aG~~G~~~A~~La~~---g~~V~vle~~~ 34 (410)
T PRK12409 3 HIAVIG-AGITGVTTAYALAQR---GYQVTVFDRHR 34 (410)
T ss_pred EEEEEC-CCHHHHHHHHHHHHC---CCeEEEEeCCC
Confidence 678885 599999999999997 68999999874
No 382
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.61 E-value=0.022 Score=35.04 Aligned_cols=34 Identities=18% Similarity=0.199 Sum_probs=29.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++|.|.|+ |.+|..++..|++. +++|++.++++.
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~---G~~V~~~d~~~~ 35 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVS---GFQTTLVDIKQE 35 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhC---CCcEEEEeCCHH
Confidence 46888877 99999999999987 689999998765
No 383
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=95.58 E-value=0.041 Score=33.08 Aligned_cols=37 Identities=16% Similarity=0.241 Sum_probs=30.2
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
..+++++|+|++|.+|..+++.+... +.+|+++++++
T Consensus 143 ~~g~~vlI~g~~~~~g~~~~~~a~~~---g~~v~~~~~~~ 179 (325)
T cd08253 143 KAGETVLVHGGSGAVGHAAVQLARWA---GARVIATASSA 179 (325)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHc---CCEEEEEeCCH
Confidence 35789999999999999999888776 46788887743
No 384
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=95.57 E-value=0.067 Score=33.36 Aligned_cols=37 Identities=11% Similarity=0.254 Sum_probs=29.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG 52 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~ 52 (67)
++|.|.|+ |.+|+.++..|+..+ -.++|++++++++.
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g-~~~ei~l~D~~~~~ 37 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQG-IADELVLIDINEEK 37 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCcch
Confidence 36889986 999999999998862 12589999997653
No 385
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=95.54 E-value=0.035 Score=34.89 Aligned_cols=36 Identities=11% Similarity=0.105 Sum_probs=28.8
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.+.+++|.|++|.+|...++.+... +.+|+++++++
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~---G~~Vi~~~~~~ 193 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLH---GCYVVGSAGSS 193 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHc---CCEEEEEcCCH
Confidence 4678999999999999998877766 56787776543
No 386
>KOG1198|consensus
Probab=95.53 E-value=0.039 Score=35.26 Aligned_cols=26 Identities=27% Similarity=0.417 Sum_probs=22.9
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhh
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRS 36 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~ 36 (67)
-+++.+||.||+|.+|++.++-+...
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~ 181 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHA 181 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhc
Confidence 45679999999999999999887776
No 387
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=95.51 E-value=0.04 Score=34.46 Aligned_cols=38 Identities=29% Similarity=0.449 Sum_probs=31.3
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+.+++|+|.|+ |-+|..+++.|... ....|++++|++.
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~--g~~~V~v~~r~~~ 213 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAK--GVAEITIANRTYE 213 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHc--CCCEEEEEeCCHH
Confidence 46889999987 99999999999874 2468999998754
No 388
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.50 E-value=0.048 Score=32.63 Aligned_cols=39 Identities=21% Similarity=0.379 Sum_probs=31.1
Q ss_pred hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
++.+++++|+|.| .|.+|+++++.|...+ ..+++++|.+
T Consensus 16 q~~L~~~~VlivG-~GglGs~va~~La~~G--vg~i~lvD~D 54 (228)
T cd00757 16 QEKLKNARVLVVG-AGGLGSPAAEYLAAAG--VGKLGLVDDD 54 (228)
T ss_pred HHHHhCCcEEEEC-CCHHHHHHHHHHHHcC--CCEEEEEcCC
Confidence 4557778999996 6778999999999973 5688888764
No 389
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=95.49 E-value=0.032 Score=34.21 Aligned_cols=34 Identities=24% Similarity=0.231 Sum_probs=28.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
|+|.|.| .|.+|..++..|.+. +++|++.++++.
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~---g~~V~~~d~~~~ 34 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSL---GHTVYGVSRRES 34 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence 3688886 899999999999887 578999998643
No 390
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.44 E-value=0.033 Score=34.47 Aligned_cols=35 Identities=17% Similarity=0.207 Sum_probs=30.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG 52 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~ 52 (67)
++|.|.|+ |.+|..++..++.. ++.|++.+++++.
T Consensus 6 ~~V~ViGa-G~mG~~iA~~~a~~---G~~V~l~d~~~~~ 40 (286)
T PRK07819 6 QRVGVVGA-GQMGAGIAEVCARA---GVDVLVFETTEEL 40 (286)
T ss_pred cEEEEEcc-cHHHHHHHHHHHhC---CCEEEEEECCHHH
Confidence 47889976 99999999999987 7899999998764
No 391
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.43 E-value=0.11 Score=32.75 Aligned_cols=36 Identities=14% Similarity=0.132 Sum_probs=29.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++|.|+|+ |.+|..++..|+.. +-..++.+++.+++
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~-~~~~el~LiD~~~~ 39 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAK-GLADELVLVDVVED 39 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhc-CCCCEEEEEeCCcc
Confidence 47999996 99999999988876 34468999998764
No 392
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=95.42 E-value=0.036 Score=31.21 Aligned_cols=37 Identities=24% Similarity=0.328 Sum_probs=31.9
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++|.|.+.-+|+-++..|.++ +..|++..+..
T Consensus 26 ~~gk~v~VvGrs~~vG~pla~lL~~~---gatV~~~~~~t 62 (140)
T cd05212 26 LDGKKVLVVGRSGIVGAPLQCLLQRD---GATVYSCDWKT 62 (140)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEeCCCC
Confidence 67899999999999999999999986 57888876543
No 393
>PTZ00117 malate dehydrogenase; Provisional
Probab=95.42 E-value=0.076 Score=33.43 Aligned_cols=39 Identities=18% Similarity=0.238 Sum_probs=30.9
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG 52 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~ 52 (67)
.+.++|.|+|| |.+|..+...+.... ..+|.+++.+++.
T Consensus 3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~--~~~l~L~Di~~~~ 41 (319)
T PTZ00117 3 VKRKKISMIGA-GQIGSTVALLILQKN--LGDVVLYDVIKGV 41 (319)
T ss_pred CCCcEEEEECC-CHHHHHHHHHHHHCC--CCeEEEEECCCcc
Confidence 35678999997 999999988877762 2579999987653
No 394
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=95.41 E-value=0.051 Score=33.88 Aligned_cols=37 Identities=22% Similarity=0.201 Sum_probs=31.3
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+.+++++|.|. |.+|+.++..|... +.+|++.+|++.
T Consensus 150 l~g~kvlViG~-G~iG~~~a~~L~~~---Ga~V~v~~r~~~ 186 (296)
T PRK08306 150 IHGSNVLVLGF-GRTGMTLARTLKAL---GANVTVGARKSA 186 (296)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence 45789999986 78999999999887 569999998753
No 395
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.41 E-value=0.051 Score=33.97 Aligned_cols=36 Identities=22% Similarity=0.265 Sum_probs=29.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
|+|.|.|+ |.+|..++..|+..+ -..+|.++++++.
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g-~~~ev~l~D~~~~ 36 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRG-LASEIVLVDINKA 36 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC-CCCEEEEEECCch
Confidence 47899998 999999999988862 2368999998764
No 396
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.41 E-value=0.035 Score=33.32 Aligned_cols=34 Identities=21% Similarity=0.404 Sum_probs=27.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
|+++|.| .|-+|..+++.|.+. ++.|+++++++.
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~---g~~Vv~Id~d~~ 34 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEE---GHNVVLIDRDEE 34 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhC---CCceEEEEcCHH
Confidence 4566665 566699999999997 789999998754
No 397
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=95.40 E-value=0.056 Score=33.61 Aligned_cols=38 Identities=13% Similarity=0.219 Sum_probs=30.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.++++++|.|+ |..+++++..|.+. +..+|++++|...
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~--g~~~i~i~nR~~~ 162 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTH--GVQKLQVADLDTS 162 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHC--CCCEEEEEcCCHH
Confidence 44678999987 77899999999986 2468999999754
No 398
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=95.36 E-value=0.058 Score=32.37 Aligned_cols=36 Identities=14% Similarity=0.134 Sum_probs=29.8
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
.++.+++|+|++|.+|..+++.+... +.+|++++++
T Consensus 138 ~~~~~vlv~g~~~~ig~~~~~~~~~~---g~~v~~~~~~ 173 (323)
T cd05276 138 KAGETVLIHGGASGVGTAAIQLAKAL---GARVIATAGS 173 (323)
T ss_pred CCCCEEEEEcCcChHHHHHHHHHHHc---CCEEEEEcCC
Confidence 35679999999999999999988886 5678877765
No 399
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=95.36 E-value=0.026 Score=33.38 Aligned_cols=29 Identities=14% Similarity=0.268 Sum_probs=25.5
Q ss_pred cCC--ChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 20 GGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 20 Ga~--G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
|++ +.||..+++.|++. +++|++.+|+..
T Consensus 1 g~~~s~GiG~aia~~l~~~---Ga~V~~~~~~~~ 31 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEE---GANVILTDRNEE 31 (241)
T ss_dssp STSSTSHHHHHHHHHHHHT---TEEEEEEESSHH
T ss_pred CCCCCCChHHHHHHHHHHC---CCEEEEEeCChH
Confidence 555 99999999999998 789999999865
No 400
>PRK00711 D-amino acid dehydrogenase small subunit; Validated
Probab=95.36 E-value=0.054 Score=34.47 Aligned_cols=33 Identities=18% Similarity=0.245 Sum_probs=27.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
|.|+|.| .|++|..++.+|.++ +.+|.++++..
T Consensus 1 ~~v~IVG-~Gi~Gls~A~~l~~~---g~~V~vle~~~ 33 (416)
T PRK00711 1 MRVVVLG-SGVIGVTSAWYLAQA---GHEVTVIDRQP 33 (416)
T ss_pred CEEEEEC-CcHHHHHHHHHHHHC---CCEEEEEeCCC
Confidence 3577885 599999999999887 67999999964
No 401
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=95.35 E-value=0.035 Score=33.90 Aligned_cols=35 Identities=29% Similarity=0.360 Sum_probs=28.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+.+++|.|++|.+|..+++.+... +.+|+++++.+
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~---g~~v~~~~~~~ 181 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKL---GYEVVASTGKA 181 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC---CCeEEEEecCH
Confidence 568999999999999998887776 56788877654
No 402
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=95.32 E-value=0.051 Score=35.13 Aligned_cols=35 Identities=14% Similarity=0.201 Sum_probs=25.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHhh-CCCcceEEEEEe
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRS-FPDIGAIYIMVR 48 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~-~~~~~~v~~~~r 48 (67)
++|.|.||||.+|+.+++.|.+. +=...+++.++.
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss 36 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFST 36 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEc
Confidence 46899999999999999998843 212234555544
No 403
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.31 E-value=0.024 Score=36.60 Aligned_cols=34 Identities=15% Similarity=0.305 Sum_probs=25.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCc--ceEEEEEe
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDI--GAIYIMVR 48 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~--~~v~~~~r 48 (67)
++|.|.||||++|+.+++.+++.. .. .++..++.
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~-~f~~~~l~~~ss 37 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEEN-DFDLIEPVFFST 37 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCC-CCCcCcEEEecc
Confidence 478999999999999999777753 22 23555554
No 404
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=95.30 E-value=0.056 Score=35.18 Aligned_cols=38 Identities=34% Similarity=0.586 Sum_probs=31.5
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+.+++++|.|+ |-+|..+++.|... +..+|++++|+..
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~--G~~~V~v~~rs~~ 215 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRK--GVGKILIANRTYE 215 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHC--CCCEEEEEeCCHH
Confidence 56789999987 99999999999886 2368999998754
No 405
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.29 E-value=0.061 Score=34.07 Aligned_cols=38 Identities=18% Similarity=0.075 Sum_probs=31.8
Q ss_pred hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.+.++++.|.|- |-||+.+++.+... +.+|++.+|.+.
T Consensus 147 ~L~gktvgIiG~-G~IG~~vA~~l~~~---G~~V~~~d~~~~ 184 (333)
T PRK13243 147 DVYGKTIGIIGF-GRIGQAVARRAKGF---GMRILYYSRTRK 184 (333)
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHHC---CCEEEEECCCCC
Confidence 367899999976 99999999999886 578999888643
No 406
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.27 E-value=0.07 Score=29.47 Aligned_cols=33 Identities=30% Similarity=0.399 Sum_probs=26.4
Q ss_pred eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+|+|.|. |.+|+++++.|...+ ..+++++|.+.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~G--v~~i~ivD~d~ 33 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSG--VGKITLIDFDT 33 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCC--CCEEEEEcCCC
Confidence 4778875 889999999999973 45898888753
No 407
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.26 E-value=0.048 Score=34.85 Aligned_cols=40 Identities=25% Similarity=0.339 Sum_probs=32.2
Q ss_pred hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+..+++.+|+|.|+ |.+|+.+++.|... +..+++++|.+.
T Consensus 23 q~~L~~~~VlivG~-GGlGs~~a~~La~~--Gvg~i~lvD~D~ 62 (355)
T PRK05597 23 QQSLFDAKVAVIGA-GGLGSPALLYLAGA--GVGHITIIDDDT 62 (355)
T ss_pred HHHHhCCeEEEECC-CHHHHHHHHHHHHc--CCCeEEEEeCCE
Confidence 44577889999976 77899999999987 356899988864
No 408
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.26 E-value=0.069 Score=33.05 Aligned_cols=38 Identities=18% Similarity=0.141 Sum_probs=30.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+++++++|.|+ |..|+.++..|.+.+ ..+|+++.|+.+
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~G--~~~i~I~nRt~~ 160 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASLG--VTDITVINRNPD 160 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHcC--CCeEEEEeCCHH
Confidence 45788999976 777999999999872 468999999754
No 409
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=95.25 E-value=0.087 Score=32.81 Aligned_cols=38 Identities=11% Similarity=0.148 Sum_probs=29.9
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.++++++|.|+ |..+++++..|... ...+|++++|++.
T Consensus 122 ~~~k~vlvlGa-GGaarAi~~~l~~~--g~~~i~i~nRt~~ 159 (288)
T PRK12749 122 IKGKTMVLLGA-GGASTAIGAQGAIE--GLKEIKLFNRRDE 159 (288)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHC--CCCEEEEEeCCcc
Confidence 45688999987 55599999988876 2468999999754
No 410
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=95.24 E-value=0.073 Score=33.77 Aligned_cols=36 Identities=19% Similarity=0.142 Sum_probs=29.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++|.|+|| |.||+.++..|+.+. -+.++++++..+.
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~-~~~el~LiDi~~~ 36 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQG-LGSELVLIDINEE 36 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhccc-ccceEEEEEcccc
Confidence 47999999 999999999996652 3348999998743
No 411
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=95.24 E-value=0.07 Score=33.09 Aligned_cols=38 Identities=18% Similarity=0.157 Sum_probs=30.2
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.++++++|.|+ |..|++++..|...+ ..+|++++|+..
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~G--~~~I~I~nR~~~ 162 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTLG--VERLTIFDVDPA 162 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcC--CCEEEEECCCHH
Confidence 45678999976 668999999999872 458999999754
No 412
>KOG1199|consensus
Probab=95.23 E-value=0.069 Score=31.87 Aligned_cols=40 Identities=20% Similarity=0.250 Sum_probs=34.4
Q ss_pred hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
...++...+|||+...+|+...+.|.++ +..|.+++-+.+
T Consensus 5 rs~kglvalvtggasglg~ataerlakq---gasv~lldlp~s 44 (260)
T KOG1199|consen 5 RSTKGLVALVTGGASGLGKATAERLAKQ---GASVALLDLPQS 44 (260)
T ss_pred hhhcCeeEEeecCcccccHHHHHHHHhc---CceEEEEeCCcc
Confidence 3467788999999999999999999998 678888887655
No 413
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=95.21 E-value=0.066 Score=32.60 Aligned_cols=37 Identities=22% Similarity=0.120 Sum_probs=29.3
Q ss_pred EEEEcCCChHHHHHHHHHHhhCC-CcceEEEEEeCCCC
Q psy17490 16 ILVTGGTGFMGKLLIDKLLRSFP-DIGAIYIMVRDKKG 52 (67)
Q Consensus 16 ilitGa~G~iG~~l~~~l~~~~~-~~~~v~~~~r~~~~ 52 (67)
|.|+||.|.+|..++..|+.... ...+|+++|.++..
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~ 38 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEK 38 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCccc
Confidence 47899999999999999988621 23689999987653
No 414
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=95.21 E-value=0.043 Score=33.83 Aligned_cols=34 Identities=18% Similarity=0.240 Sum_probs=29.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++|.|.| .|.+|..++..|+.. +++|++.++++.
T Consensus 5 ~~V~vIG-~G~mG~~iA~~l~~~---G~~V~~~d~~~~ 38 (295)
T PLN02545 5 KKVGVVG-AGQMGSGIAQLAAAA---GMDVWLLDSDPA 38 (295)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhc---CCeEEEEeCCHH
Confidence 5788885 599999999999987 689999998764
No 415
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=95.19 E-value=0.065 Score=35.52 Aligned_cols=36 Identities=22% Similarity=0.361 Sum_probs=29.9
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++|+|+ |.+|+.++..|.+. +.+|++.+|+.
T Consensus 330 ~~~k~vlIiGa-GgiG~aia~~L~~~---G~~V~i~~R~~ 365 (477)
T PRK09310 330 LNNQHVAIVGA-GGAAKAIATTLARA---GAELLIFNRTK 365 (477)
T ss_pred cCCCEEEEEcC-cHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence 45689999995 89999999999987 46888888764
No 416
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=95.17 E-value=0.065 Score=35.24 Aligned_cols=37 Identities=19% Similarity=0.139 Sum_probs=31.3
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+.+++++|.|. |.+|+.++..+... +.+|++.++++.
T Consensus 210 l~Gk~VlViG~-G~IG~~vA~~lr~~---Ga~ViV~d~dp~ 246 (425)
T PRK05476 210 IAGKVVVVAGY-GDVGKGCAQRLRGL---GARVIVTEVDPI 246 (425)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhC---CCEEEEEcCCch
Confidence 47889999985 89999999999887 568999888754
No 417
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=95.17 E-value=0.071 Score=32.16 Aligned_cols=36 Identities=14% Similarity=0.164 Sum_probs=29.7
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
++.+++|+|++|.+|..+++.+... +.++++++++.
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~---g~~v~~~~~~~ 179 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAA---GATVIATTRTS 179 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHc---CCEEEEEcCCH
Confidence 4678999999999999999988776 56788877653
No 418
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=95.13 E-value=0.11 Score=32.56 Aligned_cols=34 Identities=26% Similarity=0.265 Sum_probs=27.3
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
.+.+++|+|+ |.+|...++.+... +.+|++++|+
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~---G~~vi~~~~~ 205 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLR---GFEVYVLNRR 205 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHc---CCeEEEEecC
Confidence 5678999985 99999999776665 4588888874
No 419
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.13 E-value=0.057 Score=32.17 Aligned_cols=39 Identities=21% Similarity=0.295 Sum_probs=31.4
Q ss_pred hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
...++..+|+|.|+ |.+|+.+++.|...+ ..+++++|.+
T Consensus 23 q~~L~~~~V~ViG~-GglGs~ia~~La~~G--vg~i~lvD~D 61 (212)
T PRK08644 23 LEKLKKAKVGIAGA-GGLGSNIAVALARSG--VGNLKLVDFD 61 (212)
T ss_pred HHHHhCCCEEEECc-CHHHHHHHHHHHHcC--CCeEEEEeCC
Confidence 34567788999974 778999999999973 5689998886
No 420
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=95.13 E-value=0.074 Score=34.62 Aligned_cols=35 Identities=26% Similarity=0.412 Sum_probs=28.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
++|.|.|+||.||...++-+.+. ++..+|.++.-+
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~-p~~f~VvaLaa~ 36 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRN-PDRFRVVALSAG 36 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhC-ccccEEEEEEcC
Confidence 58999999999999999887764 444688888743
No 421
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=95.13 E-value=0.087 Score=26.99 Aligned_cols=36 Identities=31% Similarity=0.344 Sum_probs=26.5
Q ss_pred eEEEEcCCChHHHHHHHHHHhhCCCcceEEEE-EeCCC
Q psy17490 15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-VRDKK 51 (67)
Q Consensus 15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~-~r~~~ 51 (67)
+|.++ |+|-+|..+++.|++.+...++|+.. +|+++
T Consensus 1 kI~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~ 37 (96)
T PF03807_consen 1 KIGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPE 37 (96)
T ss_dssp EEEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHH
T ss_pred CEEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHH
Confidence 46667 89999999999999982112788865 67643
No 422
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=95.12 E-value=0.055 Score=31.83 Aligned_cols=36 Identities=19% Similarity=0.244 Sum_probs=29.1
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
..+.+++|+|+.+ +|..+++.+... +.+|+++++++
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~---g~~v~~~~~~~ 168 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAA---GARVIVTDRSD 168 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHc---CCeEEEEcCCH
Confidence 3467899999999 999999887776 57888887764
No 423
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.10 E-value=0.051 Score=33.44 Aligned_cols=35 Identities=14% Similarity=0.041 Sum_probs=29.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.++|.|.|+ |.+|..++..|+.. +++|++.+++++
T Consensus 4 ~~kI~vIGa-G~mG~~iA~~la~~---G~~V~l~d~~~~ 38 (292)
T PRK07530 4 IKKVGVIGA-GQMGNGIAHVCALA---GYDVLLNDVSAD 38 (292)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHC---CCeEEEEeCCHH
Confidence 467888865 99999999999987 689999998754
No 424
>PRK06223 malate dehydrogenase; Reviewed
Probab=95.09 E-value=0.081 Score=32.80 Aligned_cols=35 Identities=17% Similarity=0.095 Sum_probs=28.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++|.|+|+ |.+|..++..+.... -+ +|++++++++
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~-~~-ev~L~D~~~~ 37 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKE-LG-DVVLFDIVEG 37 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-Ce-EEEEEECCCc
Confidence 58999998 999999999988762 13 8999999655
No 425
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=95.09 E-value=0.068 Score=34.51 Aligned_cols=36 Identities=22% Similarity=0.390 Sum_probs=30.0
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
..++++|.|+ |.+|+.+++.|.+. ++.|+++++++.
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~---~~~v~vid~~~~ 265 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKE---GYSVKLIERDPE 265 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhC---CCeEEEEECCHH
Confidence 3568999988 99999999998886 578999988754
No 426
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.07 E-value=0.11 Score=28.50 Aligned_cols=34 Identities=29% Similarity=0.495 Sum_probs=26.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++|+|.| .|.+|+.+++.|...+ ..+++++|.+
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~~G--v~~i~lvD~d 35 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLARSG--VGKITLVDDD 35 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHHT--TSEEEEEESS
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHhC--CCceeecCCc
Confidence 46788885 5667999999999983 5689998874
No 427
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.07 E-value=0.039 Score=34.51 Aligned_cols=36 Identities=22% Similarity=0.322 Sum_probs=30.4
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++++++|.|.++.+|+-+...|+.+ +..|++....
T Consensus 156 l~Gk~vvViGrs~iVGkPla~lL~~~---~atVt~~hs~ 191 (285)
T PRK14189 156 LRGAHAVVIGRSNIVGKPMAMLLLQA---GATVTICHSK 191 (285)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHC---CCEEEEecCC
Confidence 67899999999999999999999887 5678765443
No 428
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.07 E-value=0.045 Score=33.53 Aligned_cols=34 Identities=18% Similarity=0.119 Sum_probs=28.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++|.|.|+ |.+|..++..++.. +++|+++++++.
T Consensus 4 ~kI~VIG~-G~mG~~ia~~la~~---g~~V~~~d~~~~ 37 (282)
T PRK05808 4 QKIGVIGA-GTMGNGIAQVCAVA---GYDVVMVDISDA 37 (282)
T ss_pred cEEEEEcc-CHHHHHHHHHHHHC---CCceEEEeCCHH
Confidence 46888865 99999999999987 578999988755
No 429
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=95.05 E-value=0.086 Score=31.71 Aligned_cols=37 Identities=19% Similarity=0.307 Sum_probs=31.1
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcc--eEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIG--AIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~--~v~~~~r~~ 50 (67)
+++++++|.|| |..|+.++..|.+. +.. +|++++|+.
T Consensus 23 l~~~rvlvlGA-GgAg~aiA~~L~~~--G~~~~~i~ivdr~g 61 (226)
T cd05311 23 IEEVKIVINGA-GAAGIAIARLLLAA--GAKPENIVVVDSKG 61 (226)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHc--CcCcceEEEEeCCC
Confidence 67789999988 88899999999886 245 899999983
No 430
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.01 E-value=0.13 Score=32.26 Aligned_cols=33 Identities=18% Similarity=0.328 Sum_probs=29.7
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEE
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM 46 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~ 46 (67)
+.+++++|.|.+|.+|+-+...|+++ ++.|++.
T Consensus 156 l~Gk~v~vIG~S~ivG~Pla~lL~~~---gatVtv~ 188 (284)
T PRK14179 156 LEGKHAVVIGRSNIVGKPMAQLLLDK---NATVTLT 188 (284)
T ss_pred CCCCEEEEECCCCcCcHHHHHHHHHC---CCEEEEE
Confidence 67899999999999999999999987 5788776
No 431
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=95.01 E-value=0.097 Score=32.54 Aligned_cols=38 Identities=29% Similarity=0.472 Sum_probs=30.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.++|.|.|++|-.|+.+++.+.+. ++..-+-+++|.++
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~-~~~~L~aa~~~~~~ 39 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEA-PDLELVAAFDRPGS 39 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcC-CCceEEEEEecCCc
Confidence 358999999999999999998886 44445666777654
No 432
>TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase. 1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis.
Probab=95.00 E-value=0.072 Score=34.73 Aligned_cols=36 Identities=31% Similarity=0.452 Sum_probs=28.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
++|.|.|+||.||...++-+.+. ++..+|.+++-..
T Consensus 2 k~i~IlGsTGSIG~qtL~Vi~~~-~~~f~v~~Laa~~ 37 (389)
T TIGR00243 2 KQIVILGSTGSIGKSTLDVVRHN-PDHFQVVALSAGK 37 (389)
T ss_pred ceEEEEecChHHHHHHHHHHHhC-ccccEEEEEEcCC
Confidence 57999999999999999887664 4446888887643
No 433
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=94.96 E-value=0.1 Score=30.10 Aligned_cols=36 Identities=22% Similarity=0.302 Sum_probs=27.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++|+++|.|.+..+|+-+...|.++ +..|+.....
T Consensus 34 l~Gk~v~VvGrs~~VG~Pla~lL~~~---~atVt~~h~~ 69 (160)
T PF02882_consen 34 LEGKKVVVVGRSNIVGKPLAMLLLNK---GATVTICHSK 69 (160)
T ss_dssp TTT-EEEEE-TTTTTHHHHHHHHHHT---T-EEEEE-TT
T ss_pred CCCCEEEEECCcCCCChHHHHHHHhC---CCeEEeccCC
Confidence 67899999999999999999999987 5677775544
No 434
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=94.95 E-value=0.19 Score=33.31 Aligned_cols=40 Identities=23% Similarity=0.209 Sum_probs=30.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhC------CCcceEEEEEeCCCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSF------PDIGAIYIMVRDKKG 52 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~------~~~~~v~~~~r~~~~ 52 (67)
.-+|.|+|++|.+|.+++..|+... +-..+++.++++.+.
T Consensus 100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~ 145 (444)
T PLN00112 100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQA 145 (444)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcch
Confidence 3589999999999999999988751 122478888887663
No 435
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=94.94 E-value=0.071 Score=32.65 Aligned_cols=37 Identities=14% Similarity=0.089 Sum_probs=29.4
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.++.+++|.|++|-+|..+++.+... +.+|+++++++
T Consensus 138 ~~~~~vlI~ga~g~ig~~~~~~a~~~---g~~v~~~~~~~ 174 (329)
T cd08250 138 KSGETVLVTAAAGGTGQFAVQLAKLA---GCHVIGTCSSD 174 (329)
T ss_pred CCCCEEEEEeCccHHHHHHHHHHHHc---CCeEEEEeCcH
Confidence 35678999999999999988877775 46788877653
No 436
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.91 E-value=0.076 Score=32.69 Aligned_cols=34 Identities=15% Similarity=0.122 Sum_probs=28.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++|.|.| +|.+|..++..|... +++|+++++++.
T Consensus 4 ~kIaViG-aG~mG~~iA~~la~~---G~~V~l~d~~~~ 37 (287)
T PRK08293 4 KNVTVAG-AGVLGSQIAFQTAFH---GFDVTIYDISDE 37 (287)
T ss_pred cEEEEEC-CCHHHHHHHHHHHhc---CCeEEEEeCCHH
Confidence 5788996 499999999999886 689999998754
No 437
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=94.84 E-value=0.096 Score=31.54 Aligned_cols=36 Identities=14% Similarity=0.214 Sum_probs=29.3
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.+.+++|+|++|.+|..+++.+... +.+|+++.+++
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~---g~~v~~~~~~~ 174 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAF---GARVFTTAGSD 174 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHc---CCEEEEEeCCH
Confidence 4679999999999999988877776 56888877653
No 438
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=94.83 E-value=0.076 Score=32.81 Aligned_cols=34 Identities=29% Similarity=0.309 Sum_probs=28.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
|+|.|.| .|.+|..++..|.+. ++.|++++|++.
T Consensus 2 mkI~iiG-~G~mG~~~a~~L~~~---g~~V~~~~r~~~ 35 (325)
T PRK00094 2 MKIAVLG-AGSWGTALAIVLARN---GHDVTLWARDPE 35 (325)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhC---CCEEEEEECCHH
Confidence 4788997 599999999999986 678999998643
No 439
>KOG0023|consensus
Probab=94.83 E-value=0.12 Score=33.24 Aligned_cols=36 Identities=11% Similarity=0.131 Sum_probs=31.0
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.++.+.|+|+.| +|+--++..... +.+|+++++...
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAM---G~rV~vis~~~~ 216 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAM---GMRVTVISTSSK 216 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHh---CcEEEEEeCCch
Confidence 578999999999 999888887776 789999999863
No 440
>PRK08328 hypothetical protein; Provisional
Probab=94.78 E-value=0.1 Score=31.41 Aligned_cols=39 Identities=18% Similarity=0.283 Sum_probs=30.1
Q ss_pred hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
..+++.+|+|.|+ |.+|+++++.|...+ ..+++++|.+.
T Consensus 23 ~~L~~~~VlIiG~-GGlGs~ia~~La~~G--vg~i~lvD~D~ 61 (231)
T PRK08328 23 EKLKKAKVAVVGV-GGLGSPVAYYLAAAG--VGRILLIDEQT 61 (231)
T ss_pred HHHhCCcEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCc
Confidence 4466778999854 567999999999973 56898888654
No 441
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=94.77 E-value=0.12 Score=32.12 Aligned_cols=36 Identities=17% Similarity=0.166 Sum_probs=30.4
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++|+|.|. |.|.+|+.+...|.+. +++|++.+|+..
T Consensus 3 ~~m~I~ii-G~G~~G~~lA~~l~~~---G~~V~~~~r~~~ 38 (308)
T PRK14619 3 QPKTIAIL-GAGAWGSTLAGLASAN---GHRVRVWSRRSG 38 (308)
T ss_pred CCCEEEEE-CccHHHHHHHHHHHHC---CCEEEEEeCCCC
Confidence 45789888 6699999999999987 689999998754
No 442
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=94.76 E-value=0.11 Score=32.95 Aligned_cols=38 Identities=13% Similarity=0.036 Sum_probs=31.5
Q ss_pred hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.+.++++.|.| .|.+|+.+++.|... +.+|++.+|.+.
T Consensus 143 ~l~g~~VgIIG-~G~IG~~vA~~L~~~---G~~V~~~d~~~~ 180 (330)
T PRK12480 143 PVKNMTVAIIG-TGRIGAATAKIYAGF---GATITAYDAYPN 180 (330)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHHhC---CCEEEEEeCChh
Confidence 35778999985 699999999999876 689999998754
No 443
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=94.75 E-value=0.11 Score=31.58 Aligned_cols=40 Identities=18% Similarity=0.305 Sum_probs=31.3
Q ss_pred hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
++.+++.+|+|.| .|.+|+.+++.|...+ ..+++++|.+.
T Consensus 19 q~~L~~~~VlvvG-~GglGs~va~~La~~G--vg~i~lvD~D~ 58 (240)
T TIGR02355 19 QEALKASRVLIVG-LGGLGCAASQYLAAAG--VGNLTLLDFDT 58 (240)
T ss_pred HHHHhCCcEEEEC-cCHHHHHHHHHHHHcC--CCEEEEEeCCc
Confidence 4457778898885 5667999999999973 56899988864
No 444
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=94.72 E-value=0.094 Score=32.07 Aligned_cols=36 Identities=8% Similarity=0.078 Sum_probs=29.3
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.+.+++|.|++|.+|..+++.+... +.+|+++++++
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~---G~~vi~~~~~~ 180 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLL---GARVVGIAGSD 180 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHc---CCEEEEEeCCH
Confidence 4678999999999999998888776 56788877643
No 445
>PLN02602 lactate dehydrogenase
Probab=94.71 E-value=0.23 Score=31.89 Aligned_cols=36 Identities=14% Similarity=0.222 Sum_probs=29.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++|.|+|+ |.+|+.++..++.. +-..++.+++.+++
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~-~l~~el~LiDi~~~ 73 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQ-DLADELALVDVNPD 73 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhC-CCCCEEEEEeCCCc
Confidence 58999996 99999999998876 33458999998764
No 446
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=94.71 E-value=0.083 Score=32.55 Aligned_cols=34 Identities=24% Similarity=0.270 Sum_probs=28.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++|.|.| +|.+|..++..|+.. +++|+++++++.
T Consensus 4 ~~I~ViG-aG~mG~~iA~~la~~---G~~V~l~d~~~~ 37 (291)
T PRK06035 4 KVIGVVG-SGVMGQGIAQVFART---GYDVTIVDVSEE 37 (291)
T ss_pred cEEEEEC-ccHHHHHHHHHHHhc---CCeEEEEeCCHH
Confidence 5788885 599999999999987 679999998765
No 447
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=94.69 E-value=0.11 Score=31.57 Aligned_cols=37 Identities=14% Similarity=0.064 Sum_probs=30.2
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
..+.+++|+|+++.+|..+++.+... +.+|+++++++
T Consensus 165 ~~~~~vlI~g~~~~iG~~~~~~~~~~---g~~v~~~~~~~ 201 (342)
T cd08266 165 RPGETVLVHGAGSGVGSAAIQIAKLF---GATVIATAGSE 201 (342)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHc---CCEEEEEeCCH
Confidence 34678999999999999999988886 56788777653
No 448
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=94.66 E-value=0.1 Score=34.13 Aligned_cols=38 Identities=21% Similarity=0.313 Sum_probs=31.4
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+.+++++|.|+ |-.|+.++..|...+ ...|++..|...
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g--~~~I~V~nRt~~ 216 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALA--PKQIMLANRTIE 216 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcC--CCEEEEECCCHH
Confidence 56789999988 888999999998862 358999999754
No 449
>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional
Probab=94.65 E-value=0.067 Score=34.06 Aligned_cols=35 Identities=20% Similarity=0.148 Sum_probs=26.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
.+|.| ||||-+|+.+++.|-++.-...+++++...
T Consensus 4 ~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~ 38 (322)
T PRK06901 4 LNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIE 38 (322)
T ss_pred ceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccc
Confidence 47899 999999999999888764333456665543
No 450
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.63 E-value=0.067 Score=33.50 Aligned_cols=37 Identities=16% Similarity=0.152 Sum_probs=31.4
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+.+++++|.|.+..+|+-+...|+.+ +..|++..+..
T Consensus 157 l~Gk~vvViGrs~iVG~Pla~lL~~~---~atVtv~hs~T 193 (285)
T PRK10792 157 TYGLNAVVVGASNIVGRPMSLELLLA---GCTVTVCHRFT 193 (285)
T ss_pred CCCCEEEEECCCcccHHHHHHHHHHC---CCeEEEEECCC
Confidence 67899999999999999999999886 46888776543
No 451
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.62 E-value=0.068 Score=33.43 Aligned_cols=37 Identities=19% Similarity=0.229 Sum_probs=30.9
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+++++++|.|.+..+|+-+...|+++ +..|++..+..
T Consensus 156 l~Gk~vvViGrS~~VGkPla~lL~~~---~ATVt~chs~T 192 (282)
T PRK14180 156 TEGAYAVVVGASNVVGKPVSQLLLNA---KATVTTCHRFT 192 (282)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHC---CCEEEEEcCCC
Confidence 67899999999999999999999886 46777765443
No 452
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=94.56 E-value=0.093 Score=30.64 Aligned_cols=33 Identities=24% Similarity=0.246 Sum_probs=25.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
|+|.|. |.||+|.-++..|.+. |++|+.++.++
T Consensus 1 M~I~Vi-GlGyvGl~~A~~lA~~---G~~V~g~D~~~ 33 (185)
T PF03721_consen 1 MKIAVI-GLGYVGLPLAAALAEK---GHQVIGVDIDE 33 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHT---TSEEEEE-S-H
T ss_pred CEEEEE-CCCcchHHHHHHHHhC---CCEEEEEeCCh
Confidence 578888 8999999999999998 79999999864
No 453
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=94.56 E-value=0.21 Score=31.39 Aligned_cols=35 Identities=17% Similarity=0.342 Sum_probs=28.4
Q ss_pred eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+|.|.|+ |.+|..++..|+.. +-..++.+++..++
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~-~~~~elvL~Di~~~ 35 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALAL-GLFSEIVLIDVNEG 35 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhc-CCCCEEEEEeCCcc
Confidence 4789998 99999999998885 33468999998655
No 454
>TIGR00036 dapB dihydrodipicolinate reductase.
Probab=94.54 E-value=0.15 Score=31.37 Aligned_cols=35 Identities=26% Similarity=0.395 Sum_probs=26.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
++|.|.|++|.+|+.+++.+.+. ++..-+-+++|.
T Consensus 2 ikV~IiGa~G~MG~~i~~~i~~~-~~~elvav~d~~ 36 (266)
T TIGR00036 2 IKVAVAGAAGRMGRELIKAALAA-EGLQLVAAFERH 36 (266)
T ss_pred eEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecC
Confidence 47999999999999999998875 344344455644
No 455
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=94.52 E-value=0.084 Score=32.14 Aligned_cols=35 Identities=29% Similarity=0.438 Sum_probs=28.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+.+++|.|++|.+|..+++.+... +.+|+++++++
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~---g~~v~~~~~~~ 181 (325)
T cd05280 147 DGPVLVTGATGGVGSIAVAILAKL---GYTVVALTGKE 181 (325)
T ss_pred CCEEEEECCccHHHHHHHHHHHHc---CCEEEEEeCCH
Confidence 358999999999999998877665 45788877754
No 456
>PLN02712 arogenate dehydrogenase
Probab=94.47 E-value=0.12 Score=35.70 Aligned_cols=36 Identities=17% Similarity=0.295 Sum_probs=30.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.++++|.|+| .|.+|..+++.|.+. +++|++.+|+.
T Consensus 367 ~~~~kIgIIG-lG~mG~slA~~L~~~---G~~V~~~dr~~ 402 (667)
T PLN02712 367 GSKLKIAIVG-FGNFGQFLAKTMVKQ---GHTVLAYSRSD 402 (667)
T ss_pred CCCCEEEEEe-cCHHHHHHHHHHHHC---cCEEEEEECCh
Confidence 4568999998 899999999999886 57899988874
No 457
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=94.46 E-value=0.073 Score=33.20 Aligned_cols=37 Identities=16% Similarity=0.221 Sum_probs=28.1
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.+.+++|+|+ |.+|...++.+...+ ..+|+++++++.
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G--~~~Vi~~~~~~~ 205 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLG--AAEIVCADVSPR 205 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcC--CcEEEEEeCCHH
Confidence 4678999986 999999998877761 236888887643
No 458
>PRK08223 hypothetical protein; Validated
Probab=94.39 E-value=0.1 Score=32.75 Aligned_cols=40 Identities=25% Similarity=0.278 Sum_probs=31.4
Q ss_pred hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
++.+++.+|+|.|+ |.+|+.++++|...+ ..+++++|.+.
T Consensus 22 Q~kL~~s~VlIvG~-GGLGs~va~~LA~aG--VG~i~lvD~D~ 61 (287)
T PRK08223 22 QQRLRNSRVAIAGL-GGVGGIHLLTLARLG--IGKFTIADFDV 61 (287)
T ss_pred HHHHhcCCEEEECC-CHHHHHHHHHHHHhC--CCeEEEEeCCC
Confidence 44577888999965 556999999999983 56898888764
No 459
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=94.38 E-value=0.07 Score=33.36 Aligned_cols=35 Identities=17% Similarity=0.269 Sum_probs=28.0
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.+.+++|.|+ |.+|...++.+... +.+|+++++++
T Consensus 166 ~g~~VlV~G~-G~vG~~a~~~a~~~---G~~vi~~~~~~ 200 (349)
T TIGR03201 166 KGDLVIVIGA-GGVGGYMVQTAKAM---GAAVVAIDIDP 200 (349)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHc---CCeEEEEcCCH
Confidence 3678999999 99999998887776 45788877653
No 460
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.38 E-value=0.084 Score=33.13 Aligned_cols=37 Identities=14% Similarity=0.195 Sum_probs=31.0
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+.+++++|.|.+..+|+-+...|+.+ +..|++.....
T Consensus 162 l~Gk~vvViGrs~iVGkPla~lL~~~---~atVtv~hs~T 198 (287)
T PRK14176 162 IEGKNAVIVGHSNVVGKPMAAMLLNR---NATVSVCHVFT 198 (287)
T ss_pred CCCCEEEEECCCcccHHHHHHHHHHC---CCEEEEEeccC
Confidence 57899999999999999999999886 46777766543
No 461
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=94.36 E-value=0.14 Score=31.35 Aligned_cols=38 Identities=21% Similarity=0.209 Sum_probs=28.8
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhC-CCcceEEEEEeCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSF-PDIGAIYIMVRDK 50 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~-~~~~~v~~~~r~~ 50 (67)
..|+|.++| .|-+|..++..|++.+ -..++|++.+|++
T Consensus 2 ~~mkI~~IG-~G~mG~aia~~l~~~g~~~~~~v~v~~r~~ 40 (279)
T PRK07679 2 SIQNISFLG-AGSIAEAIIGGLLHANVVKGEQITVSNRSN 40 (279)
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHHCCCCCcceEEEECCCC
Confidence 346899996 9999999999999862 0126788888754
No 462
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=94.36 E-value=0.15 Score=31.07 Aligned_cols=36 Identities=19% Similarity=0.209 Sum_probs=29.2
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.+.+++|+|++|.+|..+++.+... +.+|+++++++
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~---g~~v~~~~~~~ 177 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAA---GATVVGAAGGP 177 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence 4678999999999999998887776 56788877643
No 463
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.33 E-value=0.075 Score=33.28 Aligned_cols=37 Identities=14% Similarity=0.164 Sum_probs=30.8
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
+.+++++|.|.+..+|+-+...|+++ +..|++.....
T Consensus 157 l~Gk~vvViGrS~iVGkPla~lL~~~---~atVt~chs~T 193 (284)
T PRK14177 157 VTGKNAVVVGRSPILGKPMAMLLTEM---NATVTLCHSKT 193 (284)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHC---CCEEEEeCCCC
Confidence 67899999999999999999999986 46777765443
No 464
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=94.32 E-value=0.14 Score=32.78 Aligned_cols=38 Identities=16% Similarity=0.128 Sum_probs=32.3
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+.+++++|.|+ |=+|..++++|.+.+ ..+|++..|...
T Consensus 172 l~~k~vLvIGa-Gem~~l~a~~L~~~g--~~~i~v~nRt~~ 209 (338)
T PRK00676 172 SKKASLLFIGY-SEINRKVAYYLQRQG--YSRITFCSRQQL 209 (338)
T ss_pred ccCCEEEEEcc-cHHHHHHHHHHHHcC--CCEEEEEcCCcc
Confidence 67889999988 999999999999972 368999998754
No 465
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.32 E-value=0.079 Score=33.22 Aligned_cols=36 Identities=22% Similarity=0.359 Sum_probs=30.1
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++++++|.|.+..+|+=+...|+++ +..|++.-+.
T Consensus 153 l~Gk~vvViGrS~iVGkPla~lL~~~---~aTVtichs~ 188 (287)
T PRK14173 153 LAGKEVVVVGRSNIVGKPLAALLLRE---DATVTLAHSK 188 (287)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHC---CCEEEEeCCC
Confidence 67899999999999999999999886 4677765544
No 466
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.31 E-value=0.14 Score=31.73 Aligned_cols=34 Identities=15% Similarity=0.174 Sum_probs=28.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++|.|.|+ |.+|..++..|+.. +++|+++++++.
T Consensus 5 ~~I~vIGa-G~mG~~iA~~l~~~---g~~V~~~d~~~~ 38 (311)
T PRK06130 5 QNLAIIGA-GTMGSGIAALFARK---GLQVVLIDVMEG 38 (311)
T ss_pred cEEEEECC-CHHHHHHHHHHHhC---CCeEEEEECCHH
Confidence 57888855 99999999999986 578999988654
No 467
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=94.30 E-value=0.18 Score=31.36 Aligned_cols=35 Identities=23% Similarity=0.291 Sum_probs=29.4
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
..|+|+|. |.|-+|..+...|.+. +++|+++.|++
T Consensus 4 ~~m~I~Ii-G~GaiG~~lA~~L~~~---g~~V~~~~r~~ 38 (313)
T PRK06249 4 ETPRIGII-GTGAIGGFYGAMLARA---GFDVHFLLRSD 38 (313)
T ss_pred cCcEEEEE-CCCHHHHHHHHHHHHC---CCeEEEEEeCC
Confidence 34689999 6788999999999886 68999999964
No 468
>PLN00203 glutamyl-tRNA reductase
Probab=94.29 E-value=0.13 Score=34.68 Aligned_cols=38 Identities=29% Similarity=0.489 Sum_probs=31.4
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+.+++|+|.|+ |-+|..+++.|...+ ..+|+++.|+..
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G--~~~V~V~nRs~e 301 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKG--CTKMVVVNRSEE 301 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCC--CCeEEEEeCCHH
Confidence 55789999988 999999999998862 357999988754
No 469
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=94.28 E-value=0.11 Score=32.48 Aligned_cols=36 Identities=19% Similarity=0.192 Sum_probs=26.9
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
.+.+++|.|+ |.+|...++.+... +.+|+++++++.
T Consensus 165 ~g~~VlV~G~-g~iG~~a~~~a~~~---G~~vi~~~~~~~ 200 (329)
T TIGR02822 165 PGGRLGLYGF-GGSAHLTAQVALAQ---GATVHVMTRGAA 200 (329)
T ss_pred CCCEEEEEcC-CHHHHHHHHHHHHC---CCeEEEEeCChH
Confidence 4678999997 88998877665554 457888877654
No 470
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=94.27 E-value=0.13 Score=31.93 Aligned_cols=38 Identities=34% Similarity=0.517 Sum_probs=30.2
Q ss_pred hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.+++.+|+|. |.|.+|+++++.|...+ ..++++++.+.
T Consensus 27 kL~~s~VlVv-G~GGVGs~vae~Lar~G--Vg~itLiD~D~ 64 (268)
T PRK15116 27 LFADAHICVV-GIGGVGSWAAEALARTG--IGAITLIDMDD 64 (268)
T ss_pred HhcCCCEEEE-CcCHHHHHHHHHHHHcC--CCEEEEEeCCE
Confidence 4667889888 55778999999999972 47899988753
No 471
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=94.25 E-value=0.16 Score=30.74 Aligned_cols=36 Identities=17% Similarity=0.207 Sum_probs=29.4
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.+.+++|.|++|.+|..+++.+... +.+|+++++++
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~---g~~v~~~~~~~ 177 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKAL---GATVTATTRSP 177 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHc---CCEEEEEeCCH
Confidence 4679999999999999998888776 56788777653
No 472
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.22 E-value=0.16 Score=31.91 Aligned_cols=34 Identities=15% Similarity=0.327 Sum_probs=29.5
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV 47 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~ 47 (67)
+.+++++|.|++..+|+-+...|+++ +..|+++.
T Consensus 155 l~Gk~vvVvGrs~~VG~Pla~lL~~~---gAtVtv~h 188 (285)
T PRK14191 155 IKGKDVVIIGASNIVGKPLAMLMLNA---GASVSVCH 188 (285)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHC---CCEEEEEe
Confidence 67899999999999999999999987 56777754
No 473
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=94.22 E-value=0.11 Score=33.79 Aligned_cols=34 Identities=15% Similarity=0.183 Sum_probs=29.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++|.|. |.|++|..++..|.+. +++|+++++++.
T Consensus 4 ~kI~VI-GlG~~G~~~A~~La~~---G~~V~~~D~~~~ 37 (415)
T PRK11064 4 ETISVI-GLGYIGLPTAAAFASR---QKQVIGVDINQH 37 (415)
T ss_pred cEEEEE-CcchhhHHHHHHHHhC---CCEEEEEeCCHH
Confidence 578888 5699999999999997 689999998754
No 474
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=94.22 E-value=0.19 Score=31.74 Aligned_cols=39 Identities=15% Similarity=0.258 Sum_probs=30.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG 52 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~ 52 (67)
.+.++|.|+| +|.+|..++..++... ...|++++.+++.
T Consensus 4 ~~~~KI~IIG-aG~vG~~ia~~la~~g--l~~i~LvDi~~~~ 42 (321)
T PTZ00082 4 IKRRKISLIG-SGNIGGVMAYLIVLKN--LGDVVLFDIVKNI 42 (321)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCC--CCeEEEEeCCCch
Confidence 4557899999 5999999998877752 2469999987764
No 475
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.21 E-value=0.089 Score=32.87 Aligned_cols=36 Identities=19% Similarity=0.325 Sum_probs=30.3
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
+++++++|.|.+..+|+-+...|+++ +..|++....
T Consensus 156 l~Gk~vvViGrS~~VGkPla~lL~~~---~AtVt~chs~ 191 (278)
T PRK14172 156 IEGKEVVVIGRSNIVGKPVAQLLLNE---NATVTICHSK 191 (278)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHC---CCEEEEeCCC
Confidence 67899999999999999999999886 4677776544
No 476
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=94.20 E-value=0.13 Score=31.12 Aligned_cols=40 Identities=25% Similarity=0.341 Sum_probs=30.9
Q ss_pred hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.+.+++.+|+|.| .|.+|+++++.|...+ ..+++++|.+.
T Consensus 6 ~~~L~~~~VlVvG-~GGvGs~va~~Lar~G--Vg~i~LvD~D~ 45 (231)
T cd00755 6 LEKLRNAHVAVVG-LGGVGSWAAEALARSG--VGKLTLIDFDV 45 (231)
T ss_pred HHHHhCCCEEEEC-CCHHHHHHHHHHHHcC--CCEEEEECCCE
Confidence 3446677898885 5678999999999973 56899888754
No 477
>PRK14031 glutamate dehydrogenase; Provisional
Probab=94.19 E-value=0.17 Score=33.59 Aligned_cols=34 Identities=24% Similarity=0.355 Sum_probs=28.8
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 48 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r 48 (67)
+++++++|.|. |-+|.+.++.|.+. +.+|++++=
T Consensus 226 l~g~rVaVQGf-GNVG~~aA~~L~e~---GAkVVaVSD 259 (444)
T PRK14031 226 LKGKVCLVSGS-GNVAQYTAEKVLEL---GGKVVTMSD 259 (444)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHC---CCEEEEEEC
Confidence 67899999977 99999999999997 678887543
No 478
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=94.16 E-value=0.076 Score=31.94 Aligned_cols=26 Identities=19% Similarity=0.447 Sum_probs=22.7
Q ss_pred cCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490 20 GGTGFMGKLLIDKLLRSFPDIGAIYIMVR 48 (67)
Q Consensus 20 Ga~G~iG~~l~~~l~~~~~~~~~v~~~~r 48 (67)
.++|++|.++++.|+++ |++|+++++
T Consensus 22 ~SSGgIG~AIA~~la~~---Ga~Vvlv~~ 47 (227)
T TIGR02114 22 HSTGHLGKIITETFLSA---GHEVTLVTT 47 (227)
T ss_pred CcccHHHHHHHHHHHHC---CCEEEEEcC
Confidence 45899999999999998 789988875
No 479
>KOG1610|consensus
Probab=94.15 E-value=0.13 Score=32.77 Aligned_cols=35 Identities=26% Similarity=0.303 Sum_probs=29.7
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 48 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r 48 (67)
..++.|+|||.....|..++.+|.+. +..|++---
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~---Gf~V~Agcl 61 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKK---GFRVFAGCL 61 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhc---CCEEEEEee
Confidence 45678999999999999999999998 678877553
No 480
>PLN02696 1-deoxy-D-xylulose-5-phosphate reductoisomerase
Probab=94.15 E-value=0.16 Score=33.83 Aligned_cols=35 Identities=23% Similarity=0.346 Sum_probs=28.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
++|.|.|+||-||...++-+.+. ++..+|.++.-.
T Consensus 58 KkI~ILGSTGSIGtqtLdVI~~~-pd~f~vvaLaag 92 (454)
T PLN02696 58 KPISLLGSTGSIGTQTLDIVAEN-PDKFKVVALAAG 92 (454)
T ss_pred cEEEEecCCcHhhHHHHHHHHhC-ccccEEEEEECC
Confidence 68999999999999999987775 444677777654
No 481
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.15 E-value=0.14 Score=32.45 Aligned_cols=35 Identities=11% Similarity=0.060 Sum_probs=29.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
-++|.|.| +|.+|+.++..++.. |++|++.++++.
T Consensus 7 i~~VaVIG-aG~MG~giA~~~a~a---G~~V~l~D~~~~ 41 (321)
T PRK07066 7 IKTFAAIG-SGVIGSGWVARALAH---GLDVVAWDPAPG 41 (321)
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhC---CCeEEEEeCCHH
Confidence 35788885 599999999999997 789999998764
No 482
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=94.14 E-value=0.13 Score=31.27 Aligned_cols=35 Identities=17% Similarity=0.129 Sum_probs=28.5
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
.+.+++|.|++|.+|..+++.+... +..++++++.
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~---G~~v~~~~~~ 173 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAAR---GINVINLVRR 173 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHC---CCeEEEEecC
Confidence 4678999999999999999887776 5677777654
No 483
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=94.08 E-value=0.17 Score=32.99 Aligned_cols=38 Identities=26% Similarity=0.388 Sum_probs=30.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
+.+++++|.|+ |-+|..++..|...+ ..+|++.+|++.
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G--~~~V~v~~r~~~ 217 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKG--VRKITVANRTLE 217 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCC--CCeEEEEeCCHH
Confidence 56789999976 999999999998762 347889888754
No 484
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=94.04 E-value=0.21 Score=29.83 Aligned_cols=36 Identities=11% Similarity=0.171 Sum_probs=28.8
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
.++.+++|.|++|.+|..+++.+... +.+|++++++
T Consensus 143 ~~~~~vlv~g~~g~~g~~~~~~a~~~---g~~v~~~~~~ 178 (309)
T cd05289 143 KAGQTVLIHGAAGGVGSFAVQLAKAR---GARVIATASA 178 (309)
T ss_pred CCCCEEEEecCCchHHHHHHHHHHHc---CCEEEEEecc
Confidence 35678999999999999998887776 5677777654
No 485
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=94.04 E-value=0.17 Score=30.43 Aligned_cols=36 Identities=14% Similarity=0.134 Sum_probs=29.3
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.+.+++|+|++|-+|..+++.+... +..|++++++.
T Consensus 139 ~~~~vli~g~~~~~g~~~~~~a~~~---g~~v~~~~~~~ 174 (323)
T cd08241 139 PGETVLVLGAAGGVGLAAVQLAKAL---GARVIAAASSE 174 (323)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHh---CCEEEEEeCCH
Confidence 4678999999999999998887776 56788777653
No 486
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=94.04 E-value=0.27 Score=30.75 Aligned_cols=37 Identities=16% Similarity=0.263 Sum_probs=29.8
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++++++|.||.| .+++++..|++.+ ..+|+++.|..+
T Consensus 125 ~~~~vlilGAGG-AarAv~~aL~~~g--~~~i~V~NRt~~ 161 (283)
T COG0169 125 TGKRVLILGAGG-AARAVAFALAEAG--AKRITVVNRTRE 161 (283)
T ss_pred CCCEEEEECCcH-HHHHHHHHHHHcC--CCEEEEEeCCHH
Confidence 468899997655 5999999999982 468999999765
No 487
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=94.02 E-value=0.13 Score=31.35 Aligned_cols=37 Identities=14% Similarity=0.062 Sum_probs=29.9
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
..+.+++|.|++|.+|..+++.+... +..|++++++.
T Consensus 137 ~~~~~vlI~g~~~~vg~~~~~~a~~~---g~~v~~~~~~~ 173 (323)
T cd05282 137 PPGDWVIQNAANSAVGRMLIQLAKLL---GFKTINVVRRD 173 (323)
T ss_pred CCCCEEEEcccccHHHHHHHHHHHHC---CCeEEEEecCh
Confidence 34678999999999999998888876 56777777654
No 488
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.00 E-value=0.093 Score=32.87 Aligned_cols=35 Identities=17% Similarity=0.245 Sum_probs=30.0
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 48 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r 48 (67)
+++++++|.|.+..+|+-+...|+++ +..|++...
T Consensus 156 l~Gk~vvViGrS~iVG~Pla~lL~~~---~atVt~chs 190 (284)
T PRK14190 156 ISGKHVVVVGRSNIVGKPVGQLLLNE---NATVTYCHS 190 (284)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHC---CCEEEEEeC
Confidence 67899999999999999999999886 467777643
No 489
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=93.99 E-value=0.2 Score=31.23 Aligned_cols=34 Identities=26% Similarity=0.346 Sum_probs=25.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++|+|. |.|.+|+++.+.|.+. ++.+.++.++..
T Consensus 4 ~~v~Iv-G~GliG~s~a~~l~~~---g~~v~i~g~d~~ 37 (279)
T COG0287 4 MKVGIV-GLGLMGGSLARALKEA---GLVVRIIGRDRS 37 (279)
T ss_pred cEEEEE-CCchHHHHHHHHHHHc---CCeEEEEeecCc
Confidence 345554 5999999999999997 567766666554
No 490
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=93.99 E-value=0.24 Score=28.08 Aligned_cols=33 Identities=21% Similarity=0.194 Sum_probs=27.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
++|.+.|- |-.|+.+++.|++. +++|++.+|++
T Consensus 2 ~~Ig~IGl-G~mG~~~a~~L~~~---g~~v~~~d~~~ 34 (163)
T PF03446_consen 2 MKIGFIGL-GNMGSAMARNLAKA---GYEVTVYDRSP 34 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHT---TTEEEEEESSH
T ss_pred CEEEEEch-HHHHHHHHHHHHhc---CCeEEeeccch
Confidence 46888865 99999999999987 68999999875
No 491
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=93.97 E-value=0.13 Score=31.07 Aligned_cols=36 Identities=19% Similarity=0.296 Sum_probs=30.0
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.+.+++|.|++|.+|..+++.+... +.+|+.+++.+
T Consensus 132 ~~~~vli~g~~~~~g~~~~~~a~~~---g~~v~~~~~~~ 167 (305)
T cd08270 132 LGRRVLVTGASGGVGRFAVQLAALA---GAHVVAVVGSP 167 (305)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHc---CCEEEEEeCCH
Confidence 4789999999999999999888876 56788887654
No 492
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=93.96 E-value=0.3 Score=24.29 Aligned_cols=33 Identities=24% Similarity=0.411 Sum_probs=27.2
Q ss_pred EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG 52 (67)
Q Consensus 16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~ 52 (67)
++|. |.|++|-.++..|.+. +.+|+++.|.+.-
T Consensus 2 vvVi-GgG~ig~E~A~~l~~~---g~~vtli~~~~~~ 34 (80)
T PF00070_consen 2 VVVI-GGGFIGIELAEALAEL---GKEVTLIERSDRL 34 (80)
T ss_dssp EEEE-SSSHHHHHHHHHHHHT---TSEEEEEESSSSS
T ss_pred EEEE-CcCHHHHHHHHHHHHh---CcEEEEEeccchh
Confidence 4444 7799999999999997 5799999997653
No 493
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=93.95 E-value=0.19 Score=30.71 Aligned_cols=36 Identities=28% Similarity=0.340 Sum_probs=28.5
Q ss_pred cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490 12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50 (67)
Q Consensus 12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~ 50 (67)
.+.+++|.|++|-+|..+++..... +.+|++++.++
T Consensus 146 ~~~~vlI~ga~g~vg~~~~~~A~~~---G~~vi~~~~~~ 181 (324)
T cd08288 146 GDGPVLVTGAAGGVGSVAVALLARL---GYEVVASTGRP 181 (324)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC---CCeEEEEeCCH
Confidence 3568999999999999998877776 56777776543
No 494
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=93.92 E-value=0.3 Score=32.50 Aligned_cols=37 Identities=16% Similarity=0.036 Sum_probs=26.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHhh---CCCc-ceEEEEEeC
Q psy17490 13 DGQILVTGGTGFMGKLLIDKLLRS---FPDI-GAIYIMVRD 49 (67)
Q Consensus 13 ~~~ilitGa~G~iG~~l~~~l~~~---~~~~-~~v~~~~r~ 49 (67)
.-+|+||||+|.||.+++..+..- +++- -.+++++.+
T Consensus 123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~ 163 (452)
T cd05295 123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSP 163 (452)
T ss_pred ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCC
Confidence 357999999999999999998872 1111 245666664
No 495
>PLN02928 oxidoreductase family protein
Probab=93.92 E-value=0.2 Score=32.00 Aligned_cols=36 Identities=17% Similarity=0.118 Sum_probs=30.6
Q ss_pred hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
.+.++++.|.|- |-||+.+++.+... +.+|++.+|.
T Consensus 156 ~l~gktvGIiG~-G~IG~~vA~~l~af---G~~V~~~dr~ 191 (347)
T PLN02928 156 TLFGKTVFILGY-GAIGIELAKRLRPF---GVKLLATRRS 191 (347)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHhhC---CCEEEEECCC
Confidence 367889999965 99999999999887 6799999886
No 496
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.91 E-value=0.11 Score=32.81 Aligned_cols=35 Identities=23% Similarity=0.232 Sum_probs=29.6
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 48 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r 48 (67)
+++++++|.|.+..+|+-+...|+++ +..|++.-.
T Consensus 156 l~Gk~vvVIGrS~iVGkPla~lL~~~---~atVtv~hs 190 (297)
T PRK14186 156 IAGKKAVVVGRSILVGKPLALMLLAA---NATVTIAHS 190 (297)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHC---CCEEEEeCC
Confidence 67899999999999999999999886 467766643
No 497
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=93.91 E-value=0.14 Score=32.91 Aligned_cols=38 Identities=11% Similarity=0.127 Sum_probs=31.5
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG 52 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~ 52 (67)
-.+++++|+|+. .+|..-++.+... +.+|++++|+++.
T Consensus 165 ~pG~~V~I~G~G-GlGh~avQ~Aka~---ga~Via~~~~~~K 202 (339)
T COG1064 165 KPGKWVAVVGAG-GLGHMAVQYAKAM---GAEVIAITRSEEK 202 (339)
T ss_pred CCCCEEEEECCc-HHHHHHHHHHHHc---CCeEEEEeCChHH
Confidence 347899999888 7899888888777 5899999998763
No 498
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=93.90 E-value=0.16 Score=32.65 Aligned_cols=38 Identities=21% Similarity=0.266 Sum_probs=30.7
Q ss_pred hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
..+++++|+|.|+ |.+|++++..|...+ ..++++++++
T Consensus 131 ~~l~~~~VlvvG~-GG~Gs~ia~~La~~G--vg~i~lvD~d 168 (376)
T PRK08762 131 RRLLEARVLLIGA-GGLGSPAALYLAAAG--VGTLGIVDHD 168 (376)
T ss_pred HHHhcCcEEEECC-CHHHHHHHHHHHHcC--CCeEEEEeCC
Confidence 3467788999955 778999999999973 5689999886
No 499
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=93.89 E-value=0.12 Score=34.52 Aligned_cols=34 Identities=15% Similarity=0.190 Sum_probs=30.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490 14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51 (67)
Q Consensus 14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~ 51 (67)
++|.|.|+ |..|..++..++.. ++.|++.+++++
T Consensus 8 ~~V~VIGa-G~MG~gIA~~la~a---G~~V~l~D~~~e 41 (507)
T PRK08268 8 ATVAVIGA-GAMGAGIAQVAAQA---GHTVLLYDARAG 41 (507)
T ss_pred CEEEEECC-CHHHHHHHHHHHhC---CCeEEEEeCCHH
Confidence 57999977 99999999999987 789999999865
No 500
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=93.89 E-value=0.19 Score=30.07 Aligned_cols=36 Identities=19% Similarity=0.122 Sum_probs=28.9
Q ss_pred ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490 11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49 (67)
Q Consensus 11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~ 49 (67)
.++.+++|.|++|.+|..+++.+... +..|++++++
T Consensus 135 ~~g~~vlI~g~~g~~g~~~~~~a~~~---g~~v~~~~~~ 170 (320)
T cd05286 135 KPGDTVLVHAAAGGVGLLLTQWAKAL---GATVIGTVSS 170 (320)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHc---CCEEEEEcCC
Confidence 35678999999999999998877776 5677777654
Done!