RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17490
(67 letters)
>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia
pseudotuberculosis [TaxId: 633]}
Length = 356
Score = 40.6 bits (93), Expect = 2e-06
Identities = 13/59 (22%), Positives = 21/59 (35%)
Query: 9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVN 67
F++ ++ VTG TGF G L L + + RV + + S
Sbjct: 4 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEI 62
>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240
(T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 252
Score = 39.8 bits (91), Expect = 4e-06
Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51
+LVTG +G G+++ KL +VR +
Sbjct: 6 VLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQ 40
>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant
arborvitae (Thuja plicata) [TaxId: 3316]}
Length = 312
Score = 39.4 bits (90), Expect = 6e-06
Identities = 10/41 (24%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPE 56
+L+ GGTG++GK +++ + Y++ R + S+ +
Sbjct: 6 VLIVGGTGYIGKRIVNASISLGHP---TYVLFRPEVVSNID 43
>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase
{Loblolly pine (Pinus taeda) [TaxId: 3352]}
Length = 307
Score = 39.0 bits (89), Expect = 7e-06
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKN 61
IL+ G TG++G+ + L +++VR+ SS E+ +
Sbjct: 6 ILLIGATGYIGRHVAKASLDLGHP---TFLLVRESTASSNSEKAQL 48
>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces
salmonicolor [TaxId: 5005]}
Length = 342
Score = 37.5 bits (85), Expect = 3e-05
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 16 ILVTGGTGFMGKLLIDKLLR 35
+LVTG GF+ ++++LL
Sbjct: 14 VLVTGANGFVASHVVEQLLE 33
>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 393
Score = 37.6 bits (85), Expect = 3e-05
Identities = 9/52 (17%), Positives = 20/52 (38%)
Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVN 67
++V GG G+ G L + ++ + +VR + S++
Sbjct: 4 VMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIH 55
>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 232
Score = 37.4 bits (85), Expect = 3e-05
Identities = 7/35 (20%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50
+ + G +G G++L+ ++L + ++ R K
Sbjct: 17 VFILGASGETGRVLLKEILEQ-GLFSKVTLIGRRK 50
>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA
{Aspergillus nidulans [TaxId: 162425]}
Length = 350
Score = 37.3 bits (85), Expect = 3e-05
Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 5/43 (11%)
Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGA-IYIMVRDKKGSSPEE 57
I V G TG G LI G + V KG EE
Sbjct: 6 IAVVGATGRQGASLIRVAAAV----GHHVRAQVHSLKGLIAEE 44
>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB)
{Streptomyces venezuelae [TaxId: 54571]}
Length = 322
Score = 37.1 bits (85), Expect = 4e-05
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 16 ILVTGGTGFMGKLLIDKLL-RSFPDIGAIYIMVRDK 50
+LVTGG GF+G + +LL ++PD+ A ++V D
Sbjct: 3 LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDS 38
>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB)
{Streptococcus suis, serotype 2 [TaxId: 1307]}
Length = 346
Score = 36.9 bits (84), Expect = 4e-05
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK-KGSSPEERVKNMLNS 65
I+VTGG GF+G + + + PD +++ V DK + + ++ +L
Sbjct: 5 IIVTGGAGFIGSNFVHYVYNNHPD---VHVTVLDKLTYAGNKANLEAILGD 52
>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 212
Score = 36.3 bits (82), Expect = 6e-05
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50
+L+ G TG G+ L+D++L P + + R
Sbjct: 5 VLLAGATGLTGEHLLDRILSE-PTLAKVIAPARKA 38
>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA
(PrmI) {Escherichia coli [TaxId: 562]}
Length = 342
Score = 35.7 bits (80), Expect = 1e-04
Identities = 10/46 (21%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKN 61
+L+ G GF+G L ++LLR + D + + +
Sbjct: 3 VLILGVNGFIGNHLTERLLRE----DHYEVYGLDIGSDAISRFLNH 44
>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 205
Score = 35.4 bits (80), Expect = 1e-04
Identities = 8/34 (23%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49
I + G TG G + + +++ + + ++VRD
Sbjct: 6 IAIFGATGQTGLTTLAQAVQAGYE---VTVLVRD 36
>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase
(UDP-galactose 4-epimerase) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 347
Score = 35.8 bits (81), Expect = 1e-04
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS 53
+LVTGG G++G + +L+ + D + S
Sbjct: 4 VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDS 41
>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 341
Score = 35.7 bits (81), Expect = 1e-04
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEER 58
L+TG GF+G L++ LL+ + + + + E R
Sbjct: 19 WLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVR 61
>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase
{Escherichia coli [TaxId: 562]}
Length = 307
Score = 35.4 bits (79), Expect = 1e-04
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 16 ILVTGGTGFMGKLLIDKLLR 35
I+VTGG GF+G ++ L
Sbjct: 2 IIVTGGAGFIGSNIVKALND 21
>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 312
Score = 35.4 bits (81), Expect = 2e-04
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVN 67
IL+TGG GF+G L DKL+ ++ + D + + V++ + N
Sbjct: 4 ILITGGAGFVGSHLTDKLMMDGHEVTVV-----DNFFTGRKRNVEHWIGHEN 50
>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase
(UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId:
5691]}
Length = 383
Score = 34.8 bits (78), Expect = 2e-04
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 16 ILVTGGTGFMGKLLIDKLLR 35
+LV GG G++G + LLR
Sbjct: 5 VLVCGGAGYIGSHFVRALLR 24
>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase
(UDP-galactose 4-epimerase) {Escherichia coli [TaxId:
562]}
Length = 338
Score = 34.6 bits (78), Expect = 3e-04
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN 64
+LVTGG+G++G +LL++ D+ + + K+ P +
Sbjct: 3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKH 51
>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase
(UDP-galactose 4-epimerase) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 346
Score = 34.3 bits (77), Expect = 3e-04
Identities = 11/52 (21%), Positives = 20/52 (38%)
Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVN 67
+LVTGG G++G + +LL + I +G + +
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT 56
>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st
ketoreductase module {Saccharopolyspora erythraea
[TaxId: 1836]}
Length = 259
Score = 34.2 bits (77), Expect = 3e-04
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEE 57
D++ G +LVTGGTG +G + L R GA ++++ + G +
Sbjct: 4 DEWKPTGTVLVTGGTGGVGGQIARWLARR----GAPHLLLVSRSGPDADG 49
>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose
epimerase/reductase (GDP-fucose synthetase)
{Escherichia coli [TaxId: 562]}
Length = 315
Score = 34.1 bits (77), Expect = 4e-04
Identities = 4/20 (20%), Positives = 10/20 (50%)
Query: 16 ILVTGGTGFMGKLLIDKLLR 35
+ + G G +G + +L +
Sbjct: 5 VFIAGHRGMVGSAIRRQLEQ 24
>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase
(RmlD) {Salmonella enterica serovar typhimurium [TaxId:
90371]}
Length = 298
Score = 34.1 bits (76), Expect = 4e-04
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIG 41
IL+ G TG +G L L I
Sbjct: 3 ILLFGKTGQVGWELQRSLAPVGNLIA 28
>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB)
{Streptococcus suis, serotype 2 [TaxId: 1307]}
Length = 361
Score = 34.0 bits (77), Expect = 5e-04
Identities = 11/52 (21%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVN 67
IL+TGG GF+G ++ ++++ D + + + E + ++ S
Sbjct: 3 ILITGGAGFIGSAVVRHIIKNTQD---TVVNIDKLTYAGNLESLSDISESNR 51
>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi
[TaxId: 90370]}
Length = 338
Score = 33.9 bits (76), Expect = 5e-04
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 16 ILVTGGTGFMGKLLIDKLLR 35
+L+TGG GF+G L L
Sbjct: 3 LLITGGCGFLGSNLASFALS 22
>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 363
Score = 33.8 bits (76), Expect = 6e-04
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 16 ILVTGGTGFMGKLLIDKLLR 35
I +TG GF+ + +L
Sbjct: 18 ISITGAGGFIASHIARRLKH 37
>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD
{Clostridium acetobutylicum [TaxId: 1488]}
Length = 281
Score = 33.3 bits (74), Expect = 0.001
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 16 ILVTGGTGFMGKLLIDKLLR 35
IL+TG G +G+ + +L
Sbjct: 4 ILITGANGQLGREIQKQLKG 23
>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 339
Score = 32.7 bits (73), Expect = 0.001
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 16 ILVTGGTGFMGKLLIDKLLR 35
L+TG TG G L + LL
Sbjct: 4 ALITGITGQDGSYLTEFLLG 23
>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 321
Score = 32.7 bits (73), Expect = 0.001
Identities = 10/20 (50%), Positives = 10/20 (50%)
Query: 16 ILVTGGTGFMGKLLIDKLLR 35
LVTG TG G L LL
Sbjct: 3 ALVTGITGQDGAYLAKLLLE 22
>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 347
Score = 31.5 bits (70), Expect = 0.003
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 16 ILVTGGTGFMGKLLIDKLLR 35
L+TG TG G L + LL
Sbjct: 4 ALITGITGQDGSYLAEFLLE 23
>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia
coli [TaxId: 562]}
Length = 357
Score = 31.3 bits (70), Expect = 0.005
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 16 ILVTGGTGFMGKLLIDKLLR 35
L+TG TG G L + LL
Sbjct: 4 ALITGVTGQDGSYLAEFLLE 23
>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase
(acylating) {Pseudomonas sp. [TaxId: 306]}
Length = 157
Score = 26.6 bits (58), Expect = 0.20
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 21 GTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51
G+G +G L+ K+LR+ + ++ D
Sbjct: 11 GSGNIGTDLMIKVLRNAKYLEMGAMVGIDAA 41
>d1poia_ c.124.1.2 (A:) Glutaconate:CoA transferase alpha
{Acidaminococcus fermentans [TaxId: 905]}
Length = 317
Score = 26.4 bits (58), Expect = 0.23
Identities = 7/40 (17%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
Query: 1 MQEEQKVDDFYRDGQILVTGGTGFMGK--LLIDKLLRSFP 38
M + + + G + GG K + ++LR
Sbjct: 4 MTLKDAIAKYVHSGDHIALGGFTTDRKPYAAVFEILRQGI 43
>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 248
Score = 26.2 bits (56), Expect = 0.29
Identities = 9/37 (24%), Positives = 17/37 (45%)
Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG 52
IL+TG +G L+ LL ++ R+++
Sbjct: 5 ILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQ 41
>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine
reductase) {Nematode (Caenorhabditis elegans) [TaxId:
6239]}
Length = 235
Score = 26.0 bits (56), Expect = 0.36
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 14 GQILVTGGTGFMGKLLIDKLLR 35
G+++V GG G +G +++ +
Sbjct: 3 GKVIVYGGKGALGSAILEFFKK 24
>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid
dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 26.0 bits (56), Expect = 0.37
Identities = 11/50 (22%), Positives = 18/50 (36%)
Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNS 65
+L+TG + +G L +L +Y +RD K L
Sbjct: 5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALAC 54
>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 135
Score = 25.1 bits (54), Expect = 0.61
Identities = 4/21 (19%), Positives = 10/21 (47%)
Query: 16 ILVTGGTGFMGKLLIDKLLRS 36
+ V G G +G ++ + +
Sbjct: 2 VGVLGAKGKVGATMVRAVAAA 22
>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase
{Escherichia coli [TaxId: 562]}
Length = 162
Score = 24.8 bits (53), Expect = 0.92
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 16 ILVTGGTGFMGKLLIDKLLRS 36
+ + G G MG+ LI L
Sbjct: 7 VAIAGAGGRMGRQLIQAALAL 27
>d1exqa_ c.55.3.2 (A:) Retroviral integrase, catalytic domain {Human
immunodeficiency virus type 1 [TaxId: 11676]}
Length = 154
Score = 24.4 bits (52), Expect = 1.0
Identities = 7/28 (25%), Positives = 16/28 (57%), Gaps = 4/28 (14%)
Query: 42 AIYIMVRDKKGS----SPEERVKNMLNS 65
A++I + +KG S ER+ +++ +
Sbjct: 124 AVFIHNKKRKGGIGGYSAGERIVDIIAT 151
>d1woqa2 c.55.1.10 (A:140-263) Inorganic
polyphosphate/ATP-glucomannokinase PPGMK {Arthrobacter
sp. KM [TaxId: 184230]}
Length = 124
Score = 23.7 bits (51), Expect = 2.0
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM 46
+++T GTG + D L ++G + I
Sbjct: 6 LVITLGTGIGSAFIFDGKLVPNAELGHLEID 36
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice
blast fungus (Magnaporthe grisea) [TaxId: 148305]}
Length = 182
Score = 23.8 bits (50), Expect = 2.1
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 21 GTGFMGKLLIDKLLRSFPDI 40
G+GF+ + +D L S +
Sbjct: 9 GSGFVTRPTLDVLTDSGIKV 28
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin
dehydrogenase {Methylobacterium extorquens [TaxId:
408]}
Length = 191
Score = 23.7 bits (50), Expect = 2.1
Identities = 6/23 (26%), Positives = 8/23 (34%)
Query: 16 ILVTGGTGFMGKLLIDKLLRSFP 38
+V GTG +G L
Sbjct: 26 AVVLAGTGPVGMRSAALLAGEGA 48
>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine
reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 236
Score = 23.6 bits (50), Expect = 2.3
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 16 ILVTGGTGFMGKLLIDKLLR 35
+LV GG G +G +
Sbjct: 5 VLVYGGRGALGSRCVQAFRA 24
>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820
{Bacteroides thetaiotaomicron [TaxId: 818]}
Length = 122
Score = 23.3 bits (50), Expect = 2.9
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 31 DKLLRSFPDIGAIYIMVRDKKG 52
D+ + PD G IY M+++KK
Sbjct: 94 DRNVGGIPDWGIIYEMIKEKKT 115
>d1vrma1 d.96.2.1 (A:44-352) Hypothetical protein TM1553 {Thermotoga
maritima [TaxId: 2336]}
Length = 309
Score = 23.0 bits (48), Expect = 3.8
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 24 FMGKLLIDKLLRSFPDIGAIYIMVRD 49
M K++ FP++GA ++V +
Sbjct: 268 VMAGKDWRKVVLDFPNMGAHLLIVLE 293
>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly
(Drosophila lebanonensis) [TaxId: 7225]}
Length = 254
Score = 22.7 bits (48), Expect = 4.6
Identities = 6/53 (11%), Positives = 20/53 (37%), Gaps = 5/53 (9%)
Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGA-IYIMVRDKKGSSPEERVKNMLNSVN 67
++ G +G +L++ ++++ + + +K + VN
Sbjct: 8 VIFVAALGGIGLDTSRELVKR----NLKNFVILDRVENPTALAELKAINPKVN 56
>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA
{Haemophilus influenzae [TaxId: 727]}
Length = 152
Score = 22.5 bits (47), Expect = 5.7
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 16 ILVTGGTGFMGKLLIDKLLRS 36
I++ GG G +G L L S
Sbjct: 12 IVIVGGYGKLGGLFARYLRAS 32
>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase
{Escherichia coli [TaxId: 562]}
Length = 255
Score = 22.3 bits (47), Expect = 6.4
Identities = 7/29 (24%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Query: 8 DDFYRDGQ-ILVTGGTGFMGKLLIDKLLR 35
D+ DG+ ++TG +GK +
Sbjct: 5 DNLRLDGKCAIITGAGAGIGKEIAITFAT 33
>d1wika_ c.47.1.1 (A:) Thioredoxin-like protein 2 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 109
Score = 21.9 bits (46), Expect = 7.4
Identities = 5/14 (35%), Positives = 7/14 (50%)
Query: 52 GSSPEERVKNMLNS 65
GSS +K + N
Sbjct: 1 GSSGSSGLKVLTNK 14
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.140 0.391
Gapped
Lambda K H
0.267 0.0369 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 258,061
Number of extensions: 9856
Number of successful extensions: 140
Number of sequences better than 10.0: 1
Number of HSP's gapped: 140
Number of HSP's successfully gapped: 50
Length of query: 67
Length of database: 2,407,596
Length adjustment: 36
Effective length of query: 31
Effective length of database: 1,913,316
Effective search space: 59312796
Effective search space used: 59312796
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.9 bits)