Diaphorina citri psyllid: psy17497

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800------

MDRATMKKQIAEQKLKAFSIGSMGAKRTLSKKEQEEQKKKEQEAAAAQAFEEFVATFQENPAAKTNKVWVKAGTYDAGRRREDTSEKGKLYKPQSRLQEDKDSSASKAEEYARLLGDKKTESQRLKKNNKIDIKKKSNLEMFKEELKMIQEEREERHKYKGVLKGVYSEEAEPPSAIAIYQEETKGSFDSGDPCTTNLYLGNLNPKITEQQLMEIFGRYGPLASIKIMWPRSDEEKARGRNCGFVAFMNRKDGERALKYLNGKDVQSYEMKLGWGKSVPIPSYPIYIPPKMLELTVPPPPSGLPFNAQPASKDKHRIPKLRPGEPLTREDLDRLDQILNQAYVKVVVPTDRTLLMLIHRMVEFVVREGPMFEAMIMNKEISNPLYRFLFENQSPAHIYYRWKMYSILQGDQPKEWRTNEFRMFDGGSVWRPPPMNLFTQGMPDELVEEEVESKTKGSLSNSQRHRLEDFLRNLTPERVKVAEAMVFCMEHSDAAEEICECIMESLSNESTALHKKIGRLYLVSDILHNCGIKISNASFYRRGFESRLFQIFTEMHITYVNLESRLKAEGLRTRVMQVFRAWEDWAVYPKDYLIKLQNVFLGLSDAVPLDANNGNEEDEDLDGAPLSDVDGEDLDGVPLDGAALMKSLQRLPHSSSAPDEDDIDGVPCTYNITSATMDGEDLDGVPMDKVKPARAATFIPSKWETVEENEDSAVTSSKWDDVEQSESKDDSNSKGTGLTSSRRGDLSSERIQGDSGEDDSAAREEKKEANKSERSDRKKSPSPAAREEKKEANKSERSDRKKSPSPV

ccHHHHcHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHcccccccccccccccccccEEEccccccccHHHHHHHHcccccccEEEEEcccccccccccccCEEEEEccHHHHHHHHHHccccEEccEEEEECcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccccccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccHHHHHHHcccccHHHHHHHHHHHcccHcccccccccc

**********************************************AQAFEEFVATFQ****AKTNKVWVKAGTY********************************************************************************************************************DPCTTNLYLGNLNPKITEQQLMEIFGRYGPLASIKIMWPRSD**KARGRNCGFVAFMNRKDGERALKYLNGKDVQSYEMKLGWGKSVPIPSYPIYIPPKMLEL**************************************RLDQILNQAYVKVVVPTDRTLLMLIHRMVEFVVREGPMFEAMIMNKEISNPLYRFLFENQSPAHIYYRWKMYSILQGDQPKEWRTNEFRMFDGGSVWR**********************************RLEDFLRNLTPERVKVAEAMVFCMEHSDAAEEICECIMESLSNESTALHKKIGRLYLVSDILHNCGIKISNASFYRRGFESRLFQIFTEMHITYVNLESRLKAEGLRTRVMQVFRAWEDWAVYPKDYLIKLQNVFLGLSD****************************LDGV*L**********************DIDGVPCTYNI***************************************************************************************************************************************

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MDRATMKKQIAEQKLKAFSIGSMGxxxxxxxxxxxxxxxxxxxxxxxxxxxxFVATFQENPAAKTNKVWVKAGTYDAGRRREDTSEKGKLYKPQSRLQEDKDSSASKAEEYARLLGDKKTESQRLKKNNKIDIKKKSNLEMFKEELKMIQEEREERHKYKGVLKGVYSEEAEPPSAIAIYQEETKGSFDSGDPCTTNLYLGNLNPKITEQQLMEIFGRYGPLASIKIMWPRSDEEKARGRNCGFVAFMNRKDGERALKYLNGKDVQSYEMKLGWGKSVPIPSYPIYIPPKMLELTVPPPPSGLPFNAQPASKDKHRIPKLRPGEPLTREDLDRLDQILNQAYVKVVVPTDRTLLMLIHRMVEFVVREGPMFEAMIMNKEISNPLYRFLFENQSPAHIYYRWKMYSILQGDQPKEWRTNEFRMFDGGSVWRPPPMNLFTQGMPDELVEEEVESKTKGSLSNSQRHRLEDFLRNLTPERVKVAEAMVFCMEHSDAAEEICECIMESLSNESTALHKKIGRLYLVSDILHNCGIKISNASFYRRGFESRLFQIFTEMHITYVNLESRLKAEGLRTRVMQVFRAWEDWAVYPKDYLIKLQNVFLGLSDAVPLDANNGNEEDEDLDGAPLSDVDGEDLDGVPLDGAALMKSLQRLPHSSSAPDEDDIDGVPCTYNITSATMDGEDLDGVPMDKVKPARAATFIPSKWETVEENEDSAVTSSKWDDVEQSESKDDSNSKGTGLTSSRRGDLSSERIQGDSGEDDSAAREEKKEANKSERSDRKKSPSPAAREEKKEANKSERSDRKKSPSPV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
U2 snRNP-associated SURP motif-containing protein		confident	Q6NV83
U2 snRNP-associated SURP motif-containing protein		confident	Q5R7X2
U2 snRNP-associated SURP motif-containing protein		confident	O15042

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0006417 [BP]	regulation of translation	probable	GO:0032268, GO:0009889, GO:0080090, GO:0019222, GO:0051246, GO:0060255, GO:0010608, GO:0031323, GO:2000112, GO:0050794, GO:0050789, GO:0010556, GO:0065007, GO:0031326, GO:0008150, GO:0010468
GO:0006396 [BP]	RNA processing	probable	GO:0016070, GO:0006139, GO:0044260, GO:0044238, GO:0009987, GO:0006725, GO:0034641, GO:0044237, GO:0043170, GO:0090304, GO:0071704, GO:0010467, GO:0006807, GO:0008150, GO:0008152, GO:1901360, GO:0046483
GO:0005737 [CC]	cytoplasm	probable	GO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0005730 [CC]	nucleolus	probable	GO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0032991 [CC]	macromolecular complex	probable	GO:0005575
GO:0003729 [MF]	mRNA binding	probable	GO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:1901363, GO:0003723

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3SMZ, chain A
Confidence level:very confident
Coverage over the Query: 192-279
View the alignment between query and template
View the model in PyMOL

Template: 4FLB, chain A
Confidence level:very confident
Coverage over the Query: 460-554,566-601
View the alignment between query and template
View the model in PyMOL

Template: 2DT6, chain A
Confidence level:very confident
Coverage over the Query: 352-412
View the alignment between query and template
View the model in PyMOL