Query psy17499
Match_columns 147
No_of_seqs 155 out of 399
Neff 4.3
Searched_HMMs 29240
Date Sat Aug 17 00:05:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17499.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17499hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1k8f_A CAP, adenylyl cyclase-a 100.0 3.2E-42 1.1E-46 270.2 14.0 113 1-143 29-141 (157)
2 1k4z_A CAP, adenylyl cyclase-a 100.0 1.1E-41 3.7E-46 267.6 12.6 113 1-143 30-143 (159)
3 2b0r_A Possible adenyl cyclase 100.0 6.6E-41 2.3E-45 271.3 13.6 111 1-141 71-182 (202)
4 1k4z_A CAP, adenylyl cyclase-a 99.9 1.8E-25 6.3E-30 175.5 9.3 88 38-136 29-126 (159)
5 1k8f_A CAP, adenylyl cyclase-a 99.9 1.5E-25 5E-30 175.8 8.1 87 39-136 29-125 (157)
6 2b0r_A Possible adenyl cyclase 99.9 6.2E-25 2.1E-29 177.9 8.4 88 38-136 70-167 (202)
7 2yuh_A Tubulin-specific chaper 99.3 1.3E-11 4.4E-16 97.0 7.8 72 1-74 29-100 (179)
8 2yuh_A Tubulin-specific chaper 98.6 1.6E-07 5.4E-12 73.6 9.0 79 40-121 30-115 (179)
9 3bh7_B Protein XRP2; protein-p 98.0 2.5E-05 8.6E-10 67.2 9.0 73 2-76 61-133 (352)
10 3bh7_B Protein XRP2; protein-p 97.2 0.0016 5.3E-08 56.1 9.0 70 5-74 42-114 (352)
No 1
>1k8f_A CAP, adenylyl cyclase-associated protein; actin bindin structural genomics, PSI, protein structure initiative; 2.80A {Homo sapiens} SCOP: b.80.5.1
Probab=100.00 E-value=3.2e-42 Score=270.19 Aligned_cols=113 Identities=53% Similarity=0.893 Sum_probs=108.0
Q ss_pred CCceEEEEeecCcEEEEcCEEcEEEeeceeeeEEEEcccccEEEEEeeeeeEEEEeceeceEEEEccCCeeeeccCCcce
Q psy17499 1 MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSPESLD 80 (147)
Q Consensus 1 ~~~~v~i~~c~~~~i~i~gk~nsI~i~~C~k~~vv~~~~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~d~ss~~ 80 (147)
|+|+||||+|+|++|+||||+|+|++++|+|+.|+||++|+++++.||+++.+|+.|++|+|+||+|+++
T Consensus 29 ~~qsV~I~~C~~s~I~IkGKvNsIsld~C~k~~vv~ds~VSsvevinc~~~~vQv~g~vPtisIDktdg~---------- 98 (157)
T 1k8f_A 29 LKQVAYIYKCVNTTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSKDVKVQVMGKVPTISINKTDGC---------- 98 (157)
T ss_dssp TTCEEEEESCBSCEEEEEEEESEEEEESCEEEEEEEEEESSEEEEESCEEEEEEESSCCSEEEEESCEEE----------
T ss_pred cCcEEEEEeccceEEEEcCcEEEEEEecCCcEEEEEeccEEEEEEEecCcEEEEEecccCEEEEEccCCE----------
Confidence 7999999999999999999999999999999999999999999999999999999988888888887777
Q ss_pred eEEeeCCcceEEEeccccceeeeCCCCCceEEEEeeccceEEEeeCCCCceeeccCcccceee
Q psy17499 81 VEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEMNVLVPKGNGDYVSNQSVLGAFIV 143 (147)
Q Consensus 81 v~qV~G~vPtI~IDKtdg~~~yls~es~~~~I~tSKSs~~nV~~~~~~~d~~e~p~~~~~f~~ 143 (147)
++|||+||++++|++|||++|||++|.++|||+|+|+ ||||.-
T Consensus 99 -------------------~iYLSkesl~~ei~TsKsS~mNv~vp~~d~D~~E~pi-PEQf~t 141 (157)
T 1k8f_A 99 -------------------HAYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPV-PEQFKT 141 (157)
T ss_dssp -------------------EEECCTTCTTCEEEEESCEEEEEEEEETTTEEEEEEC-CCEEEE
T ss_pred -------------------EEEEccccCCcEEEEEcccceEEeecCCCCceeEccC-chhEEE
Confidence 9999999999999999999999999988899999999 999964
No 2
>1k4z_A CAP, adenylyl cyclase-associated protein; right-handed parallel beta-helix, intertwined dimer; 2.30A {Saccharomyces cerevisiae} SCOP: b.80.5.1 PDB: 1kq5_A
Probab=100.00 E-value=1.1e-41 Score=267.59 Aligned_cols=113 Identities=34% Similarity=0.526 Sum_probs=107.1
Q ss_pred CCceEEEEeecCcEEEEcCEEcEEEeeceeeeEEEEcccccEEEEEeeeeeEEEEeceeceEEEEccCCeeeeccCCcce
Q psy17499 1 MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSPESLD 80 (147)
Q Consensus 1 ~~~~v~i~~c~~~~i~i~gk~nsI~i~~C~k~~vv~~~~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~d~ss~~ 80 (147)
|+|+||||+|+|++|+||||+|+|++++|+|+.|+||++|+++++.||+++.+|+.|++|+|++|+|+++
T Consensus 30 ~~qsV~I~~C~~s~I~IkGKvNsItld~C~k~~vv~ds~VSsvevinc~~v~vQv~g~vPtisIDktdg~---------- 99 (159)
T 1k4z_A 30 KDESIFIGKCSQVLVQIKGKVNAISLSETESCSVVLDSSISGMDVIKSNKFGIQVNHSLPQISIDKSDGG---------- 99 (159)
T ss_dssp TTCEEEEEEEEEEEEEEESCBSEEEEEEEEEEEEEESCBSSCEEEEEEESEEEEESSCCSEEEEESCEEE----------
T ss_pred cCcEEEEEeccceEEEEcCcEEEEEEecCCcEEEEEeccEEEEEEEecCcEEEEEecccCEEEEEccCCE----------
Confidence 7999999999999999999999999999999999999999999999999999999888888887777777
Q ss_pred eEEeeCCcceEEEeccccceeeeCCCCCceEEEEeeccceEEEeeC-CCCceeeccCcccceee
Q psy17499 81 VEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEMNVLVPK-GNGDYVSNQSVLGAFIV 143 (147)
Q Consensus 81 v~qV~G~vPtI~IDKtdg~~~yls~es~~~~I~tSKSs~~nV~~~~-~~~d~~e~p~~~~~f~~ 143 (147)
++|||+||++++|+||||++|||++|. ++|||+|+|+ ||||.-
T Consensus 100 -------------------~iYLSkesl~~ei~TSksS~mNv~vp~~~d~D~~E~pi-PEQf~t 143 (159)
T 1k4z_A 100 -------------------NIYLSKESLNTEIYTSCSTAINVNLPIGEDDDYVEFPI-PEQMKH 143 (159)
T ss_dssp -------------------EEECCSTTTTCEEEEESCEEEEEEESCSGGGCCEEEEC-CCCEEE
T ss_pred -------------------EEEEChhhcCcEEEEEcccceeEEecCCCCCceeEccC-chhEEE
Confidence 999999999999999999999999996 6789999999 999964
No 3
>2b0r_A Possible adenyl cyclase-associated protein; structural genomics consortium, SGC, unknown function; 2.60A {Cryptosporidium parvum}
Probab=100.00 E-value=6.6e-41 Score=271.27 Aligned_cols=111 Identities=39% Similarity=0.645 Sum_probs=106.6
Q ss_pred CCceEEEEeecCcEEEEcCEEcEEEeeceeeeEEEEcccccEEEEEeeeeeEEEEeceeceEEEEccCCeeeeccCCcce
Q psy17499 1 MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSPESLD 80 (147)
Q Consensus 1 ~~~~v~i~~c~~~~i~i~gk~nsI~i~~C~k~~vv~~~~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~d~ss~~ 80 (147)
|+|+||||+|+|++|+|+||+|+|+|++|+|+.|+||++|+++++.||+++.+|+.|++|+|+||+|+++
T Consensus 71 ~~qsV~I~~C~nstI~IkGKvNsItld~C~k~~vv~dsvVSsvEvinc~~v~vQV~G~vPTIsIDKtDg~---------- 140 (202)
T 2b0r_A 71 IKNKVSVRCSQNSRIIVEQKVNSIFIENCVGCIFLVNGVISSIEIVNCDDIKLQMTGIVPTISLDKSNKV---------- 140 (202)
T ss_dssp TTCEEEEEEEESCEEEECSCBSEEEEEEEEEEEEEECCBSSEEEEESCEEEEEEESSCCCEEEEESCEEE----------
T ss_pred cCcEEEEEeccceEEEEcCcEEEEEEecCCcEEEEEeccEEEEEEEecCcEEEEEecccCEEEEEccCCE----------
Confidence 7999999999999999999999999999999999999999999999999999999988888888887777
Q ss_pred eEEeeCCcceEEEeccccceeeeCCCCCceEEEEeeccceEEEeeC-CCCceeeccCcccce
Q psy17499 81 VEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEMNVLVPK-GNGDYVSNQSVLGAF 141 (147)
Q Consensus 81 v~qV~G~vPtI~IDKtdg~~~yls~es~~~~I~tSKSs~~nV~~~~-~~~d~~e~p~~~~~f 141 (147)
++|||+||++++|+||||++|||++|. ++|||+|+|+ ||||
T Consensus 141 -------------------qiYLSkeSl~teIvTSKSSemNV~vP~~~dgD~~E~pI-PEQf 182 (202)
T 2b0r_A 141 -------------------NIYTSKEGKNVEVYSSKSSEMNLLFPGEEEGDWKELAI-PEQF 182 (202)
T ss_dssp -------------------EEECCGGGTTCEEEEESCEEEEEEEECSSTTCEEEEEC-CCCE
T ss_pred -------------------EEEEcccccCcEEEEecccceeEeccCCCCCceeEccC-chHh
Confidence 999999999999999999999999998 7899999999 9999
No 4
>1k4z_A CAP, adenylyl cyclase-associated protein; right-handed parallel beta-helix, intertwined dimer; 2.30A {Saccharomyces cerevisiae} SCOP: b.80.5.1 PDB: 1kq5_A
Probab=99.92 E-value=1.8e-25 Score=175.47 Aligned_cols=88 Identities=30% Similarity=0.356 Sum_probs=81.8
Q ss_pred ccccEEEEEeeeeeEEEEeceeceEEEEccCCeeeeccC--CcceeE-------EeeCCcceEEEeccccceeeeCCCCC
Q psy17499 38 SLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSP--ESLDVE-------IVLGKVPTISIDKTDGCQMYLSPESL 108 (147)
Q Consensus 38 ~~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~d~--ss~~v~-------qV~G~vPtI~IDKtdg~~~yls~es~ 108 (147)
.+-|+|||++|++++|||+||+|+|++|+|+|++|+||+ |++++. |++|++|||+|||| +
T Consensus 29 ~~~qsV~I~~C~~s~I~IkGKvNsItld~C~k~~vv~ds~VSsvevinc~~v~vQv~g~vPtisIDkt-----------d 97 (159)
T 1k4z_A 29 NKDESIFIGKCSQVLVQIKGKVNAISLSETESCSVVLDSSISGMDVIKSNKFGIQVNHSLPQISIDKS-----------D 97 (159)
T ss_dssp CTTCEEEEEEEEEEEEEEESCBSEEEEEEEEEEEEEESCBSSCEEEEEEESEEEEESSCCSEEEEESC-----------E
T ss_pred ccCcEEEEEeccceEEEEcCcEEEEEEecCCcEEEEEeccEEEEEEEecCcEEEEEecccCEEEEEcc-----------C
Confidence 466799999999999999999999999999999999999 665554 79999999999999 9
Q ss_pred ceEEEEee-ccceEEEeeCCCCceeeccC
Q psy17499 109 DVEIVSSK-SSEMNVLVPKGNGDYVSNQS 136 (147)
Q Consensus 109 ~~~I~tSK-Ss~~nV~~~~~~~d~~e~p~ 136 (147)
|++||+|| |.+++|+++++++.|+.+|.
T Consensus 98 g~~iYLSkesl~~ei~TSksS~mNv~vp~ 126 (159)
T 1k4z_A 98 GGNIYLSKESLNTEIYTSCSTAINVNLPI 126 (159)
T ss_dssp EEEEECCSTTTTCEEEEESCEEEEEEESC
T ss_pred CEEEEEChhhcCcEEEEEcccceeEEecC
Confidence 99999999 89999999999999999876
No 5
>1k8f_A CAP, adenylyl cyclase-associated protein; actin bindin structural genomics, PSI, protein structure initiative; 2.80A {Homo sapiens} SCOP: b.80.5.1
Probab=99.92 E-value=1.5e-25 Score=175.77 Aligned_cols=87 Identities=26% Similarity=0.371 Sum_probs=80.1
Q ss_pred cccEEEEEeeeeeEEEEeceeceEEEEccCCeeeeccC--CcceeE-------EeeCCcceEEEeccccceeeeCCCCCc
Q psy17499 39 LVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSP--ESLDVE-------IVLGKVPTISIDKTDGCQMYLSPESLD 109 (147)
Q Consensus 39 ~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~d~--ss~~v~-------qV~G~vPtI~IDKtdg~~~yls~es~~ 109 (147)
+-|+|||++|++++|||+||+|+|++|+|+|++|+||+ |++++. |++|++|||+|||| +|
T Consensus 29 ~~qsV~I~~C~~s~I~IkGKvNsIsld~C~k~~vv~ds~VSsvevinc~~~~vQv~g~vPtisIDkt-----------dg 97 (157)
T 1k8f_A 29 LKQVAYIYKCVNTTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSKDVKVQVMGKVPTISINKT-----------DG 97 (157)
T ss_dssp TTCEEEEESCBSCEEEEEEEESEEEEESCEEEEEEEEEESSEEEEESCEEEEEEESSCCSEEEEESC-----------EE
T ss_pred cCcEEEEEeccceEEEEcCcEEEEEEecCCcEEEEEeccEEEEEEEecCcEEEEEecccCEEEEEcc-----------CC
Confidence 55699999999999999999999999999999999999 555444 79999999999999 99
Q ss_pred eEEEEee-ccceEEEeeCCCCceeeccC
Q psy17499 110 VEIVSSK-SSEMNVLVPKGNGDYVSNQS 136 (147)
Q Consensus 110 ~~I~tSK-Ss~~nV~~~~~~~d~~e~p~ 136 (147)
++||+|| |.+++|+++++++.|+.+|-
T Consensus 98 ~~iYLSkesl~~ei~TsKsS~mNv~vp~ 125 (157)
T 1k8f_A 98 CHAYLSKNSLDCEIVSAKSSEMNVLIPT 125 (157)
T ss_dssp EEEECCTTCTTCEEEEESCEEEEEEEEE
T ss_pred EEEEEccccCCcEEEEEcccceEEeecC
Confidence 9999998 88999999999999998873
No 6
>2b0r_A Possible adenyl cyclase-associated protein; structural genomics consortium, SGC, unknown function; 2.60A {Cryptosporidium parvum}
Probab=99.91 E-value=6.2e-25 Score=177.90 Aligned_cols=88 Identities=28% Similarity=0.374 Sum_probs=81.0
Q ss_pred ccccEEEEEeeeeeEEEEeceeceEEEEccCCeeeeccC--CcceeE-------EeeCCcceEEEeccccceeeeCCCCC
Q psy17499 38 SLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSP--ESLDVE-------IVLGKVPTISIDKTDGCQMYLSPESL 108 (147)
Q Consensus 38 ~~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~d~--ss~~v~-------qV~G~vPtI~IDKtdg~~~yls~es~ 108 (147)
.+-|+|||++|++++|+|+||+|+|++|+|+|++|+||+ |++++. |++|.+|||+|||| +
T Consensus 70 e~~qsV~I~~C~nstI~IkGKvNsItld~C~k~~vv~dsvVSsvEvinc~~v~vQV~G~vPTIsIDKt-----------D 138 (202)
T 2b0r_A 70 SIKNKVSVRCSQNSRIIVEQKVNSIFIENCVGCIFLVNGVISSIEIVNCDDIKLQMTGIVPTISLDKS-----------N 138 (202)
T ss_dssp CTTCEEEEEEEESCEEEECSCBSEEEEEEEEEEEEEECCBSSEEEEESCEEEEEEESSCCCEEEEESC-----------E
T ss_pred ccCcEEEEEeccceEEEEcCcEEEEEEecCCcEEEEEeccEEEEEEEecCcEEEEEecccCEEEEEcc-----------C
Confidence 456799999999999999999999999999999999999 555444 79999999999999 9
Q ss_pred ceEEEEee-ccceEEEeeCCCCceeeccC
Q psy17499 109 DVEIVSSK-SSEMNVLVPKGNGDYVSNQS 136 (147)
Q Consensus 109 ~~~I~tSK-Ss~~nV~~~~~~~d~~e~p~ 136 (147)
|++||+|| |.+++|+++++++.|+.+|.
T Consensus 139 g~qiYLSkeSl~teIvTSKSSemNV~vP~ 167 (202)
T 2b0r_A 139 KVNIYTSKEGKNVEVYSSKSSEMNLLFPG 167 (202)
T ss_dssp EEEEECCGGGTTCEEEEESCEEEEEEEEC
T ss_pred CEEEEEcccccCcEEEEecccceeEeccC
Confidence 99999998 89999999999999999875
No 7
>2yuh_A Tubulin-specific chaperone C; microtubule, beta-tubulin folding, beta-roll, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.25 E-value=1.3e-11 Score=96.95 Aligned_cols=72 Identities=18% Similarity=0.315 Sum_probs=66.7
Q ss_pred CCceEEEEeecCcEEEEcCEEcEEEeeceeeeEEEEcccccEEEEEeeeeeEEEEeceeceEEEEccCCeeeec
Q psy17499 1 MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYL 74 (147)
Q Consensus 1 ~~~~v~i~~c~~~~i~i~gk~nsI~i~~C~k~~vv~~~~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~ 74 (147)
++|.++|++|.+++|.+.|+++++.|++|+++.|++.....+|+|.+|+++++++. ++.+.+++|.+|.+++
T Consensus 29 ~~~~v~I~~c~~c~I~i~g~~~sl~i~~c~~c~Iv~g~V~gsv~i~~C~~~~i~v~--c~Qlri~~~~~~~~yL 100 (179)
T 2yuh_A 29 HQRDVLLTELSNCTVRLYGNPNTLRLTKAHSCKLLCGPVSTSVFLEDCSDCVLAVA--CQQLRIHSTKDTRIFL 100 (179)
T ss_dssp SSCEEEECSCBSCEEEECSCCSCEEEESCBSCEEECCCCSSCEEEESCBSCEEECC--CSEEEEESCBSCEEEC
T ss_pred cCCeEEEecCcCCEEEEcCCccEEEEecCCCCEEEECCcccEEEEEeCCceEEEEE--cCEEEEeccCCeEEEE
Confidence 46899999999999999999999999999999999999999999999999999995 8899999999885554
No 8
>2yuh_A Tubulin-specific chaperone C; microtubule, beta-tubulin folding, beta-roll, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.62 E-value=1.6e-07 Score=73.59 Aligned_cols=79 Identities=16% Similarity=0.344 Sum_probs=59.5
Q ss_pred ccEEEEEeeeeeEEEEeceeceEEEEccCCeeeeccC--CcceeE-----EeeCCcceEEEeccccceeeeCCCCCceEE
Q psy17499 40 VSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSP--ESLDVE-----IVLGKVPTISIDKTDGCQMYLSPESLDVEI 112 (147)
Q Consensus 40 v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~d~--ss~~v~-----qV~G~vPtI~IDKtdg~~~yls~es~~~~I 112 (147)
-+.++|.+|++++|++.|+++++++++|++|.+++.. +++.+. ++.=.+|++.|++|+++++||+..+ .-
T Consensus 30 ~~~v~I~~c~~c~I~i~g~~~sl~i~~c~~c~Iv~g~V~gsv~i~~C~~~~i~v~c~Qlri~~~~~~~~yL~~~s---~P 106 (179)
T 2yuh_A 30 QRDVLLTELSNCTVRLYGNPNTLRLTKAHSCKLLCGPVSTSVFLEDCSDCVLAVACQQLRIHSTKDTRIFLQVTS---RA 106 (179)
T ss_dssp SCEEEECSCBSCEEEECSCCSCEEEESCBSCEEECCCCSSCEEEESCBSCEEECCCSEEEEESCBSCEEECCCSS---EE
T ss_pred CCeEEEecCcCCEEEEcCCccEEEEecCCCCEEEECCcccEEEEEeCCceEEEEEcCEEEEeccCCeEEEEeCCC---Cc
Confidence 4689999999999999999999999999999999887 333333 2333599999999999999998643 33
Q ss_pred EEeeccceE
Q psy17499 113 VSSKSSEMN 121 (147)
Q Consensus 113 ~tSKSs~~n 121 (147)
+..-|.++.
T Consensus 107 IIE~c~~i~ 115 (179)
T 2yuh_A 107 IVEDCSGIQ 115 (179)
T ss_dssp EEESCBSEE
T ss_pred EEEcCCCce
Confidence 334445543
No 9
>3bh7_B Protein XRP2; protein-protein complex, GTPase activating protein and GTPase, retinitis pigmentosa, GTP-binding, lipoprotein, myristate; HET: GDP; 1.90A {Homo sapiens} PDB: 3bh6_B* 2bx6_A
Probab=97.98 E-value=2.5e-05 Score=67.22 Aligned_cols=73 Identities=15% Similarity=0.362 Sum_probs=65.0
Q ss_pred CceEEEEeecCcEEEEcCEEcEEEeeceeeeEEEEcccccEEEEEeeeeeEEEEeceeceEEEEccCCeeeeccC
Q psy17499 2 NNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSP 76 (147)
Q Consensus 2 ~~~v~i~~c~~~~i~i~gk~nsI~i~~C~k~~vv~~~~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~d~ 76 (147)
.+.+.|.||.+++|.+-|.+.++.|++|.++.|++--.-.+++|.+|+++++.+ ....+.+.+|..|.+++-.
T Consensus 61 g~~v~I~nc~~c~I~l~~~~~sl~I~~c~nC~Iv~GpV~gsv~I~~C~n~~i~v--ac~QlRih~c~n~~~yL~~ 133 (352)
T 3bh7_B 61 GQQFLIQDCENCNIYIFDHSATVTIDDCTNCIIFLGPVKGSVFFRNCRDCKCTL--ACQQFRVRDCRKLEVFLCC 133 (352)
T ss_dssp TCCEEEESCBSCEEEECSCBSCEEEESCBSCEEEEEEEEEEEEEESCEEEEEEE--EEEEEEEESCEEEEEEEEE
T ss_pred CCcEEEecCcCCEEEEecCCceEEEecCCCCEEEEccccceEEEEcCCCcEEEE--EcceEEEecccCcEEEEEc
Confidence 367899999999999999999999999999999998888899999999999988 4678999999999777644
No 10
>3bh7_B Protein XRP2; protein-protein complex, GTPase activating protein and GTPase, retinitis pigmentosa, GTP-binding, lipoprotein, myristate; HET: GDP; 1.90A {Homo sapiens} PDB: 3bh6_B* 2bx6_A
Probab=97.19 E-value=0.0016 Score=56.09 Aligned_cols=70 Identities=11% Similarity=0.222 Sum_probs=58.5
Q ss_pred EEEEeecCcEEEE-cCEEc--EEEeeceeeeEEEEcccccEEEEEeeeeeEEEEeceeceEEEEccCCeeeec
Q psy17499 5 VYMFNCVNSTVVV-KGKLN--SVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYL 74 (147)
Q Consensus 5 v~i~~c~~~~i~i-~gk~n--sI~i~~C~k~~vv~~~~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~ 74 (147)
..+-+-.+.++.. .|+++ .+.|.+|+++.|.+-+.+.++.|.+|.+++|.+----.++.|++|.+|.+++
T Consensus 42 ~~i~~~~~~ti~~~~~~i~g~~v~I~nc~~c~I~l~~~~~sl~I~~c~nC~Iv~GpV~gsv~I~~C~n~~i~v 114 (352)
T 3bh7_B 42 YMFSGLKDETVGRLPGTVAGQQFLIQDCENCNIYIFDHSATVTIDDCTNCIIFLGPVKGSVFFRNCRDCKCTL 114 (352)
T ss_dssp SEEESCBSCEEEECTTSSTTCCEEEESCBSCEEEECSCBSCEEEESCBSCEEEEEEEEEEEEEESCEEEEEEE
T ss_pred eEEECccCCEEEECCCcccCCcEEEecCcCCEEEEecCCceEEEecCCCCEEEEccccceEEEEcCCCcEEEE
Confidence 3456666777754 57775 8999999999999999999999999999999875566789999999997775
Done!