RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy17499
         (147 letters)



>d1k8fa_ b.80.5.1 (A:) C-terminal domain of adenylylcyclase
           associated protein {Human (Homo sapiens) [TaxId: 9606]}
          Length = 157

 Score =  133 bits (337), Expect = 2e-41
 Identities = 59/132 (44%), Positives = 80/132 (60%), Gaps = 29/132 (21%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
           +  V Y++ CVN+T+ +KGK+NS+ +D+CKK  +VFD +V  VE +N + V++QV+GKVP
Sbjct: 29  LKQVAYIYKCVNTTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSKDVKVQVMGKVP 88

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
           TISI+                             KTDGC  YLS  SLD EIVS+KSSEM
Sbjct: 89  TISIN-----------------------------KTDGCHAYLSKNSLDCEIVSAKSSEM 119

Query: 121 NVLVPKGNGDYV 132
           NVL+P   GD+ 
Sbjct: 120 NVLIPTEGGDFN 131


>d1k4za_ b.80.5.1 (A:) C-terminal domain of adenylylcyclase
           associated protein {Baker's yeast (Saccharomyces
           cerevisiae) [TaxId: 4932]}
          Length = 157

 Score =  130 bits (329), Expect = 3e-40
 Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 30/133 (22%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
            +  +++  C    V +KGK+N++ +   +  SVV DS +S ++ +      +QV   +P
Sbjct: 30  KDESIFIGKCSQVLVQIKGKVNAISLSETESCSVVLDSSISGMDVIKSNKFGIQVNHSLP 89

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
            ISID                             K+DG  +YLS ESL+ EI +S S+ +
Sbjct: 90  QISID-----------------------------KSDGGNIYLSKESLNTEIYTSCSTAI 120

Query: 121 NVLVPKG-NGDYV 132
           NV +P G + DYV
Sbjct: 121 NVNLPIGEDDDYV 133


>d1qxfa_ g.41.8.4 (A:) Ribosomal protein S27e {Archaeon
          Archaeoglobus fulgidus [TaxId: 2234]}
          Length = 58

 Score = 23.2 bits (50), Expect = 5.0
 Identities = 8/35 (22%), Positives = 16/35 (45%), Gaps = 4/35 (11%)

Query: 21 LNSVFMD----SCKKSSVVFDSLVSSVEFVNCQSV 51
          ++S F+      C+   V+FD   + V+ + C   
Sbjct: 1  MHSRFVKVKCPDCEHEQVIFDHPSTIVKCIICGRT 35


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.315    0.131    0.362 

Gapped
Lambda     K      H
   0.267   0.0668    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 494,175
Number of extensions: 19647
Number of successful extensions: 29
Number of sequences better than 10.0: 1
Number of HSP's gapped: 20
Number of HSP's successfully gapped: 5
Length of query: 147
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 70
Effective length of database: 1,350,386
Effective search space: 94527020
Effective search space used: 94527020
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (22.8 bits)