Query psy17503
Match_columns 277
No_of_seqs 191 out of 1342
Neff 7.8
Searched_HMMs 29240
Date Sat Aug 17 00:14:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17503.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17503hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ryc_B Tubulin beta chain; alp 100.0 6E-90 2E-94 647.4 9.0 273 1-274 1-443 (445)
2 3ryc_A Tubulin alpha chain; al 100.0 2.3E-89 7.8E-94 644.4 10.7 268 1-269 1-448 (451)
3 2btq_B Tubulin btubb; structur 100.0 1.3E-77 4.5E-82 565.1 10.5 255 1-256 1-425 (426)
4 3cb2_A Gamma-1-tubulin, tubuli 100.0 2E-77 6.9E-82 568.6 9.7 261 1-263 2-445 (475)
5 2bto_A Tubulin btuba; bacteria 100.0 6.7E-76 2.3E-80 558.8 10.2 259 1-262 3-436 (473)
6 3m89_A FTSZ/tubulin-related pr 99.9 2.6E-23 8.7E-28 192.2 5.6 151 4-193 45-206 (427)
7 1w5f_A Cell division protein F 99.9 4.2E-23 1.5E-27 189.2 4.4 154 1-208 21-182 (353)
8 1ofu_A FTSZ, cell division pro 99.9 4.4E-22 1.5E-26 180.7 7.1 154 3-210 13-174 (320)
9 1rq2_A Cell division protein F 99.9 1.3E-22 4.3E-27 187.5 3.4 143 2-193 12-154 (382)
10 2vaw_A FTSZ, cell division pro 99.8 5.5E-22 1.9E-26 183.9 7.0 155 2-210 12-174 (394)
11 2vap_A FTSZ, cell division pro 99.8 1.5E-22 5.1E-27 186.0 2.2 142 3-193 39-180 (364)
12 2vxy_A FTSZ, cell division pro 99.8 8.9E-22 3.1E-26 181.8 4.5 154 2-209 12-173 (382)
13 2r75_1 Cell division protein F 99.8 4.9E-22 1.7E-26 181.5 1.8 152 3-208 9-168 (338)
14 3v3t_A Cell division GTPase FT 99.8 7.4E-20 2.5E-24 166.2 6.4 143 4-194 7-150 (360)
15 4dxd_A Cell division protein F 99.6 1.4E-16 4.9E-21 146.1 1.5 136 4-193 20-160 (396)
16 4ei7_A Plasmid replication pro 98.3 3E-07 1E-11 85.2 3.3 162 4-202 18-186 (389)
17 2e4h_B Tubulin alpha-ubiquitou 98.1 3.2E-06 1.1E-10 51.2 3.5 26 237-262 1-26 (36)
18 3r4v_A Putative uncharacterize 97.4 4.9E-05 1.7E-09 66.9 2.6 67 96-172 54-120 (315)
19 1pq1_B BCL2-like protein 11; B 52.4 5.3 0.00018 22.6 1.0 27 203-229 6-32 (33)
20 3bed_A PTS system, IIA compone 48.7 18 0.00062 27.7 4.1 30 114-144 45-74 (142)
21 1pdo_A Mannose permease; phosp 41.4 40 0.0014 25.4 5.0 31 114-144 41-71 (135)
22 2wh6_B BCL-2-like protein 11; 36.2 18 0.0006 19.3 1.4 20 204-223 7-26 (26)
23 3g7n_A Lipase; hydrolase fold, 34.4 14 0.00049 31.5 1.5 62 111-177 104-165 (258)
24 3ipr_A PTS system, IIA compone 29.3 66 0.0023 24.8 4.5 31 114-144 41-71 (150)
25 3mtq_A Putative phosphoenolpyr 26.9 37 0.0013 26.7 2.6 30 115-144 61-90 (159)
26 3lfh_A Manxa, phosphotransfera 26.5 37 0.0013 26.1 2.5 30 115-144 44-74 (144)
27 3gx1_A LIN1832 protein; APC633 22.8 91 0.0031 23.4 4.1 27 114-140 44-70 (130)
28 2plg_A TLL0839 protein; hypoth 22.5 59 0.002 25.8 3.0 38 226-263 118-155 (163)
29 3ct6_A PTS-dependent dihydroxy 22.3 39 0.0013 25.6 1.9 28 115-144 43-70 (131)
30 2ful_A EIF-5, eukaryotic trans 21.3 29 0.001 27.9 1.0 32 219-250 120-154 (177)
31 3uue_A LIP1, secretory lipase 20.2 40 0.0014 28.9 1.7 61 112-177 119-179 (279)
No 1
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=100.00 E-value=6e-90 Score=647.45 Aligned_cols=273 Identities=89% Similarity=1.397 Sum_probs=255.5
Q ss_pred CeeEEEEecCCchhHHHHHHHHHHHHhhCCCCCCCccCCCcccccccccccccccCCCccccceeeecCCCCcccccccC
Q psy17503 1 MREIVHVQAGQCGNQIGAKFWEIISAEHGIDPTGAYHGDKDNQLERINVYYNEAQGRNVYVPRAILVDLEPGTMDATRSG 80 (277)
Q Consensus 1 M~EiItiq~Gq~GnqiG~~~W~~~~~e~~~~~~g~~~~~~~~~~~~~~~~F~e~~~~~~~~pRavlvDle~~~i~~i~~~ 80 (277)
|||||+||+||||||||++||+++|.||+|+++|.++++++.+.+++++||+|+.. ++|+||||||||||++|++++++
T Consensus 1 mrEii~i~vGQcGnQiG~~~We~~~~EHgi~~~g~~~~~~~~~~~~~~~fF~e~~~-~~~vpRavlvDlEp~vid~i~~g 79 (445)
T 3ryc_B 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATG-NKYVPRAILVDLEPGTMDSVRSG 79 (445)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHHHHHHHTTBCTTSBBCCSCTHHHHTGGGTEEECST-TBEEECEEEEESSSHHHHHHHTS
T ss_pred CceEEEEecCCcHHHHHHHHHHHHHHHhCCCCCCCccCCccccccchhhccccCCC-CccccceeEecCCchhhhhhhcc
Confidence 99999999999999999999999999999999999988888778889999999988 99999999999999999999999
Q ss_pred CCCCCCCCCCcccccCCCccccCccccCcCcchhhhhHHHHHhhhhccCCCCCeeEEeeCCCCcCCcchhHHHHHHHhhc
Q psy17503 81 PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEF 160 (277)
Q Consensus 81 ~~~~lf~~~~~i~~~~~~~nnwa~G~~~~g~e~~~~~~d~iR~~~E~cD~lqgf~~~~s~~GGtGSGlgs~lle~l~dey 160 (277)
+++++|+|++++++++|||||||+|||+.|+++.+.++|+||+++|.||+||||+++||++||||||+|++|+++|+++|
T Consensus 80 ~~~~lf~p~~~i~g~~gAgNN~A~G~yt~G~e~~d~v~d~IRk~~E~cd~lqGf~i~hSlgGGTGSG~gs~lle~L~~ey 159 (445)
T 3ryc_B 80 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159 (445)
T ss_dssp TTGGGSCGGGEEECSSCCTTCHHHHHHSHHHHHHHHHHHHHHHHHHTCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHC
T ss_pred cccceecccceEEccccccCCccccchhhhHHHHHHHHHHHHHHHHcCCccceEEEEeecCCCCCCcHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccceEEeeCCCCCCCceeeecccchhhhhh-----------------------------------------------
Q psy17503 161 PDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQL----------------------------------------------- 193 (277)
Q Consensus 161 ~~~~~~~~~v~p~~~~~~~~v~~yN~~ls~~~l----------------------------------------------- 193 (277)
|||.+.+++|+|+|+.++++++|||++|++++|
T Consensus 160 ~kk~~~~~sV~Psp~~s~~vvepYNa~Lsl~~L~e~sD~~~~iDNeaL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT~s 239 (445)
T 3ryc_B 160 PDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTC 239 (445)
T ss_dssp TTSEEEEEEEECCGGGCSCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CccccceEEEEeCCccccccccchhhhhhHhhhhcccceeEeecchhHHHHHHhccCCCCCcchhhHHHHHhcchhhccc
Confidence 999999999999998889999999999999988
Q ss_pred --------------------------------------------------------------------------------
Q psy17503 194 -------------------------------------------------------------------------------- 193 (277)
Q Consensus 194 -------------------------------------------------------------------------------- 193 (277)
T Consensus 240 lRf~G~lN~Dl~~l~tnLVP~PrlhF~~~s~aP~~s~~~~~~~~~sv~elt~~~f~~~n~m~~~dp~~gky~a~~~~~RG 319 (445)
T 3ryc_B 240 LRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVATIFRG 319 (445)
T ss_dssp HHSCCSSSCSHHHHHHHHCSSTTCCEEEEEEESCCCTTCCCCCCCCHHHHHHHTTSGGGBSSSCCGGGSCEEEEEEEEEE
T ss_pred cccCcccccCHHHHhhcccCCCceeeeccccCcccccchhhhccCCHHHHHHHHHhhcCCeeecCCCCCcceeeeeeeec
Confidence
Q ss_pred -------------------------------------------cccccccchHHHHHHHhhhhhhhhhhccccccccccc
Q psy17503 194 -------------------------------------------MSATFIGNSTCIQDLFKRISDQFNAMFRRKAFLHWYT 230 (277)
Q Consensus 194 -------------------------------------------~s~~~l~NstsI~~~~~~i~~~f~~m~~~~aflh~y~ 230 (277)
+++++|+|+|+|.++|+++.+||++||+||||||||+
T Consensus 320 ~v~~kdv~~~i~~ik~k~~~~Fv~W~p~~~k~~i~~~pp~~~~~s~~~lsNsTaI~~~~~rl~~kFd~m~~krAFvHwY~ 399 (445)
T 3ryc_B 320 RMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 399 (445)
T ss_dssp SCCHHHHHHHHHHHHHHTGGGBCTTSTTCEEEEEESSCCTTCSEEEEEEEEEGGGHHHHHHHHHHHHHHHTTTTTTHHHH
T ss_pred CCChHHHHHHHHHHHhhCcccCcccCCCceeeeeeccCCcccceeeeeecCcHHHHHHHHHHHHHHHhhhhcccchhhhh
Confidence 5678999999999999999999999999999999999
Q ss_pred CCCCCccchhHHHHHHHHHHHHHHHHhhhccccCCCCCCCCCCc
Q psy17503 231 GEGMDEMEFTEAESNMIDLVSEYQQYQEATVEEDGEFEEDEEPL 274 (277)
Q Consensus 231 ~egm~~~~f~ea~~~l~~l~~~Y~~~~~~~~~~~~~~~~~~~~~ 274 (277)
+|||||+||+||+++|++|+++|+++++++.+++++.+||++++
T Consensus 400 ~eGmee~eF~EA~e~l~~L~~eY~~~~~~~~~~~~~~~~~~~~~ 443 (445)
T 3ryc_B 400 GEGMDEMEFTEAESNMNDLVSEYQQYQDATADEQGEFEEEEGED 443 (445)
T ss_dssp TTTCCHHHHHHHHHHHHHHHHHHHHHHHCCTTC-----------
T ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHHHhccCCccccccchhhhh
Confidence 99999999999999999999999999999887766665555543
No 2
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=100.00 E-value=2.3e-89 Score=644.44 Aligned_cols=268 Identities=42% Similarity=0.804 Sum_probs=247.4
Q ss_pred CeeEEEEecCCchhHHHHHHHHHHHHhhCCCCCCCccCCCcc--cccccccccccccCCCccccceeeecCCCCcccccc
Q psy17503 1 MREIVHVQAGQCGNQIGAKFWEIISAEHGIDPTGAYHGDKDN--QLERINVYYNEAQGRNVYVPRAILVDLEPGTMDATR 78 (277)
Q Consensus 1 M~EiItiq~Gq~GnqiG~~~W~~~~~e~~~~~~g~~~~~~~~--~~~~~~~~F~e~~~~~~~~pRavlvDle~~~i~~i~ 78 (277)
|||||+||+||||||||++||+++|.||+|+++|.++++++. +++++++||+|+.. ++|+||||||||||++|++++
T Consensus 1 mrEii~iqvGQcGnQIG~~~We~~~~EHgi~~~g~~~~~~~~~~~~~~~~~fF~e~~~-gk~vPRavlvDlEp~vid~v~ 79 (451)
T 3ryc_A 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA-GKHVPRAVFVDLEPTVIDEVR 79 (451)
T ss_dssp CCCEEEEEEHHHHHHHHHHHHHHHHHHHTCCTTSCCCCC-------CGGGGTEEECTT-SCEEESEEEEESSSHHHHHHH
T ss_pred CceEEEEeccCchhHHHHHHHHHHHhhcCCCCCCCcCCcccccccccchhhhcccCCC-CccccceeeecCCcchhheee
Confidence 999999999999999999999999999999999998876643 46789999999988 999999999999999999999
Q ss_pred cCCCCCCCCCCCcccccCCCccccCccccCcCcchhhhhHHHHHhhhhccCCCCCeeEEeeCCCCcCCcchhHHHHHHHh
Q psy17503 79 SGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAENCDCLQGFQLTHSLGGGTGSGMGTLLISKIRE 158 (277)
Q Consensus 79 ~~~~~~lf~~~~~i~~~~~~~nnwa~G~~~~g~e~~~~~~d~iR~~~E~cD~lqgf~~~~s~~GGtGSGlgs~lle~l~d 158 (277)
++++++||+|++++++++|||||||+|||+.|+++.+.++|+||+++|.||+||||+++||++||||||+|++|+++|++
T Consensus 80 ~g~~~~lf~p~~~i~gk~gAgNNwA~G~yt~G~e~~d~v~d~IRk~~E~cD~lqGF~i~hSlgGGTGSG~gs~lle~L~~ 159 (451)
T 3ryc_A 80 TGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSV 159 (451)
T ss_dssp HSTTTTTSCGGGEEECSSCCTTCHHHHHHTSHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSHHHHHHHHHHHHHHHH
T ss_pred ecccccccCHHHeeeccccccCCCCeeecccchHhHHHHHHHHHHHHHcCCCccceEEEeccCCCCCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccccceEEeeCCCCCCCceeeecccchhhhhh---------------------------------------------
Q psy17503 159 EFPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQL--------------------------------------------- 193 (277)
Q Consensus 159 ey~~~~~~~~~v~p~~~~~~~~v~~yN~~ls~~~l--------------------------------------------- 193 (277)
+|||+.+++++|+|++..++++++|||++|++++|
T Consensus 160 ey~kk~~~~~~v~P~~~~s~~vvepYNa~Lsl~~L~e~sD~~~~idNeaL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT 239 (451)
T 3ryc_A 160 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSIT 239 (451)
T ss_dssp HTTTCEEEEEEEECCTTTCCCTTHHHHHHHHHHHHGGGCSEEEEEEHHHHHHHHHHHHCCSSCCHHHHHHHHHHHHHHHH
T ss_pred hcCcceEEEEEEecCCCcccccceehHHHHHHHHHHhcccceeEeccHHHHHHHHHhccCCCCCchhhHHHHHhcccccc
Confidence 99999999999999998899999999999999988
Q ss_pred --------------------------------------------------------------------------------
Q psy17503 194 -------------------------------------------------------------------------------- 193 (277)
Q Consensus 194 -------------------------------------------------------------------------------- 193 (277)
T Consensus 240 ~slRf~G~lN~Dl~~l~tnLVP~PrlHF~~~s~aPl~s~~~~~~~~~sv~elt~~~f~~~n~m~~~dp~~gky~a~~~~~ 319 (451)
T 3ryc_A 240 ASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLY 319 (451)
T ss_dssp HHHHTTCSSSCSHHHHHHHHCSSSSCCCCEEEEECCCBSSSCCCCCCCHHHHHHHTTCGGGBSSCCCGGGSCEEEEEEEE
T ss_pred cccccCcccccCHHHHhhccCCCCceeeeccccCccccccccccccCCHHHHHHHHhccccceEecCCCCCchheehhhc
Confidence
Q ss_pred -----------------------------------------------------cccccccchHHHHHHHhhhhhhhhhhc
Q psy17503 194 -----------------------------------------------------MSATFIGNSTCIQDLFKRISDQFNAMF 220 (277)
Q Consensus 194 -----------------------------------------------------~s~~~l~NstsI~~~~~~i~~~f~~m~ 220 (277)
++++||+|+|+|.++|+++.+||++||
T Consensus 320 RG~v~~~dv~~~i~~ik~k~~~~Fv~W~p~~~kv~i~~~pP~~~p~~~la~~~~s~~~lsNsTaI~~~f~rl~~kFd~m~ 399 (451)
T 3ryc_A 320 RGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 399 (451)
T ss_dssp EESCCHHHHHHHHHHHHHHCCCCBCTTSCEEEEEEEECSCCCCCTTSSBCCCSEEEEEEEEEGGGHHHHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHhhcCCcceEEEccCceeeeeeccCCccCCCccccccceeeEEecCchHHHHHHHHHHHHHHHHh
Confidence 467899999999999999999999999
Q ss_pred ccccccccccCCCCCccchhHHHHHHHHHHHHHHHHhhhccccCCCCCC
Q psy17503 221 RRKAFLHWYTGEGMDEMEFTEAESNMIDLVSEYQQYQEATVEEDGEFEE 269 (277)
Q Consensus 221 ~~~aflh~y~~egm~~~~f~ea~~~l~~l~~~Y~~~~~~~~~~~~~~~~ 269 (277)
+||||||||++||||++||+||+++|++|++||+++..++.++++++++
T Consensus 400 ~krAFvHwY~~eGmee~eF~EA~e~l~~L~~eY~~~~~~~~~~~~~~~~ 448 (451)
T 3ryc_A 400 AKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSVEGEGEEEG 448 (451)
T ss_dssp TTTTTTHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCC----------
T ss_pred hcceeHhhhcCCccchhhHHHHHHHHHHHHHHHHHHhcCCCcccccccc
Confidence 9999999999999999999999999999999999999877654444333
No 3
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=100.00 E-value=1.3e-77 Score=565.08 Aligned_cols=255 Identities=38% Similarity=0.767 Sum_probs=229.6
Q ss_pred CeeEEEEecCCchhHHHHHHHHHHHHhhCCCCCCCccCCC-cccccccccccccccCCCccccceeeecCCCCccccccc
Q psy17503 1 MREIVHVQAGQCGNQIGAKFWEIISAEHGIDPTGAYHGDK-DNQLERINVYYNEAQGRNVYVPRAILVDLEPGTMDATRS 79 (277)
Q Consensus 1 M~EiItiq~Gq~GnqiG~~~W~~~~~e~~~~~~g~~~~~~-~~~~~~~~~~F~e~~~~~~~~pRavlvDle~~~i~~i~~ 79 (277)
||||||||+||||||||++||+++|.||+++++|.+++++ +.+.+++++||+|+.. ++|+||||+||+||++|+++++
T Consensus 1 MrEii~iq~GQ~GnqIg~~fW~~~~~ehgi~~~g~~~~~~~~~~~~~~~~fF~e~~~-~~yvPRav~vDle~~~l~~i~~ 79 (426)
T 2btq_B 1 VREILSIHVGQCGNQIADSFWRLALREHGLTEAGTLKEGSNAAANSNMEVFFHKVRD-GKYVPRAVLVDLEPGVIARIEG 79 (426)
T ss_dssp -CEEEEEEEHHHHHHHHHHHHHHHHHHHTBCTTSBBCC-------CCCTTTEEEEET-TEEEECEEEEEECC--------
T ss_pred CCcEEEEecCCcHhHHHHHHHHHHHHHcCCCCCCCccCcccccccccccceeeecCC-CceeeeeEEEecCccccccccc
Confidence 9999999999999999999999999999999999987765 5556789999999988 9999999999999999999999
Q ss_pred CCCCCCCCCCCcccccCCCccccCccccCcCcchhhhhHHHHHhhhhccCCCCCeeEEeeCCCCcCCcchhHHHHHHHhh
Q psy17503 80 GPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREE 159 (277)
Q Consensus 80 ~~~~~lf~~~~~i~~~~~~~nnwa~G~~~~g~e~~~~~~d~iR~~~E~cD~lqgf~~~~s~~GGtGSGlgs~lle~l~de 159 (277)
++++.+|+|++++.+++|+|||||+|||+.|+++.++++|+||+++|.||.+|||+++||++||||||+|+.++++++++
T Consensus 80 ~~~~~lf~p~~i~~g~~gAgnn~a~G~~~~G~~~~e~~~d~Ir~~~e~cD~lqgf~i~~s~gGGTGSG~~~~l~e~l~~~ 159 (426)
T 2btq_B 80 GDMSQLFDESSIVRKIPGAANNWARGYNVEGEKVIDQIMNVIDSAVEKTKGLQGFLMTHSIGGGSGSGLGSLILERLRQA 159 (426)
T ss_dssp ----CCCCTTSEEECCSCCTTCHHHHHTHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEEESSSSTTTHHHHHHHHHHHTT
T ss_pred cccccccCcccccccccCccCcccccccchhHHHHHHHHHHHHHHHhcCCCcceEEEEEecCCCccccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccceEEeeCCCCCCCceeeecccchhhhhh----------------------------------------------
Q psy17503 160 FPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQL---------------------------------------------- 193 (277)
Q Consensus 160 y~~~~~~~~~v~p~~~~~~~~v~~yN~~ls~~~l---------------------------------------------- 193 (277)
||++.+++++|+|+|..++.+++|||++|++++|
T Consensus 160 y~~~~~lt~~V~p~p~~~e~~~~~yNa~lsl~~L~e~~D~~i~idN~al~~i~~~~l~~~~~f~~~N~lia~~v~~it~~ 239 (426)
T 2btq_B 160 YPKKRIFTFSVVPSPLISDSAVEPYNAILTLQRILDNADGAVLLDNEALFRIAKAKLNRSPNYMDLNNIIALIVSSVTAS 239 (426)
T ss_dssp CTTSEEEEEEEECCGGGCCCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred cCcCceEEEEEecCCccccchhhHHHHHHHHHHHHHhCCcceeeccHHHHHHHhccCCCCcHHHHHHHHHHhhhcchhhh
Confidence 9999999999999988789999999999999988
Q ss_pred --------------------------------------------------------------------------------
Q psy17503 194 -------------------------------------------------------------------------------- 193 (277)
Q Consensus 194 -------------------------------------------------------------------------------- 193 (277)
T Consensus 240 lr~~g~lN~D~~d~~t~lvP~P~~hf~~~~~aP~~~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~g~yla~~~i~rG 319 (426)
T 2btq_B 240 LRFPGKLNTDLSEFVTNLVPFPGNHFLTASFAPMRGAGQEGQVRTNFPDLARETFAQDNFTAAIDWQQGVYLAASALFRG 319 (426)
T ss_dssp HHSSCSSSCSHHHHHHHHCSSTTCCEEEEECSCC-----------CCHHHHHHHTCGGGBSSCCCTTTCCEEEEEEEEEC
T ss_pred ccCCCcccCCHHHHHHHHhhCCCCceeeccccccccchhhccccCCHHHHhhhhcCccceeEecCCCCchHHHHHHHHcC
Confidence
Q ss_pred -------------------------------------------cccccccchHHHHHHHhhhhhhhhhhccccccccccc
Q psy17503 194 -------------------------------------------MSATFIGNSTCIQDLFKRISDQFNAMFRRKAFLHWYT 230 (277)
Q Consensus 194 -------------------------------------------~s~~~l~NstsI~~~~~~i~~~f~~m~~~~aflh~y~ 230 (277)
+++++|+|+|+|.++|+++.+||++||+||||||||+
T Consensus 320 ~v~~~~v~~~~~~ik~~~~fv~W~p~~~~~k~~i~~~~p~~~~~s~~~lsNstaI~~~~~~~~~~f~~m~~rrAflh~Y~ 399 (426)
T 2btq_B 320 DVKAKDVDENMATIRKSLNYASYMPASGGLKLGYAETAPEGFASSGLALVNHTGIAAVFERLIAQFDIMFDNHAYTHWYE 399 (426)
T ss_dssp C----CTTTTHHHHHTTSCBCTTSCSSCSEEEEEESCCCTTCSSBCCEEEEEGGGHHHHHHHHHHHHHHHHTTSSHHHHH
T ss_pred CCCHHHHHHHHHHHhcCCCCcccCCCCCceeeeeeccCCCCCcceeEEecCChHHHHHHHHHHHHHHHHhhcccchhhhc
Confidence 3567899999999999999999999999999999999
Q ss_pred CCCCCccchhHHHHHHHHHHHHHHHH
Q psy17503 231 GEGMDEMEFTEAESNMIDLVSEYQQY 256 (277)
Q Consensus 231 ~egm~~~~f~ea~~~l~~l~~~Y~~~ 256 (277)
+||||++||+||+++|++|+++|+++
T Consensus 400 ~eGmee~eF~ea~~~l~~l~~eY~~~ 425 (426)
T 2btq_B 400 NAGVSRDMMAKARNQIATLAQSYRDA 425 (426)
T ss_dssp TTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCccHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999976
No 4
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*
Probab=100.00 E-value=2e-77 Score=568.56 Aligned_cols=261 Identities=37% Similarity=0.768 Sum_probs=246.3
Q ss_pred CeeEEEEecCCchhHHHHHHHHHHHHhhCCCCCCCccCCCcccccccccccccccCCCccccceeeecCCCCcccccccC
Q psy17503 1 MREIVHVQAGQCGNQIGAKFWEIISAEHGIDPTGAYHGDKDNQLERINVYYNEAQGRNVYVPRAILVDLEPGTMDATRSG 80 (277)
Q Consensus 1 M~EiItiq~Gq~GnqiG~~~W~~~~~e~~~~~~g~~~~~~~~~~~~~~~~F~e~~~~~~~~pRavlvDle~~~i~~i~~~ 80 (277)
||||||||+||||||||++||+++|.||+++++|.+++....+.+++++||+|+.. ++|+||||+|||||++|++++.+
T Consensus 2 ~rEiItiqvGQ~GnqIG~~fWe~~~~Ehgi~~~g~~~~~~~~~~~~~~vfF~e~~~-~~yvPRavlvDLEp~vid~i~~~ 80 (475)
T 3cb2_A 2 PREIITLQLGQCGNQIGFEFWKQLCAEHGISPEAIVEEFATEGTDRKDVFFYQADD-EHYIPRAVLLDLEPRVIHSILNS 80 (475)
T ss_dssp CCCEEEEEEHHHHHHHHHHHHHHHHHHTTBCTTSCBCTTCCTTSSCGGGTEEECTT-SCEEECEEEEESSSHHHHHHHHS
T ss_pred CccEEEEecCCcHHHHHHHHHHHHHHhcCCCCCCCCcCcccccccccceeeeecCC-CceecceeEecCCcceeeeeccc
Confidence 79999999999999999999999999999999998876555556788999999888 99999999999999999999999
Q ss_pred CCCCCCCCCCcccccC--CCccccCccccCcCcchhhhhHHHHHhhhhccCCCCCeeEEeeCCCCcCCcchhHHHHHHHh
Q psy17503 81 PYGQIFRPDNFVFGQS--GAGNNWAKGHYTEGAELVDSVLDVVRKEAENCDCLQGFQLTHSLGGGTGSGMGTLLISKIRE 158 (277)
Q Consensus 81 ~~~~lf~~~~~i~~~~--~~~nnwa~G~~~~g~e~~~~~~d~iR~~~E~cD~lqgf~~~~s~~GGtGSGlgs~lle~l~d 158 (277)
+++++|+|++++++++ |+|||||+| |+.|++..+.++|+||+++|.||+||||+|+||++||||||+|+.+++++++
T Consensus 81 ~~~~lf~p~~~i~g~~g~gAgnn~a~G-~~~g~e~~d~~~d~Ir~~~E~cD~lqgf~i~~slGGGTGSG~~s~l~e~l~d 159 (475)
T 3cb2_A 81 PYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLND 159 (475)
T ss_dssp TTTTTSCGGGEEECCTTCCCTTCHHHH-HHHHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSSHHHHHHHHHHHHHHH
T ss_pred cccccCCccceeecccccCCCCCchhh-hhhhHhhHHHHHHHHHHHHhcCCCcceeEEeccCCCCCCcChHHHHHHHHHH
Confidence 9999999999999988 799999999 5789999999999999999999999999999999999999999999999999
Q ss_pred hccccccceEEeeCCCC-CCCceeeecccchhhhhh--------------------------------------------
Q psy17503 159 EFPDRIMNTYSVVPSPK-VSDTVVEPYNATLSVHQL-------------------------------------------- 193 (277)
Q Consensus 159 ey~~~~~~~~~v~p~~~-~~~~~v~~yN~~ls~~~l-------------------------------------------- 193 (277)
+||++.+++++|+|++. .++.+++|||++|++++|
T Consensus 160 ey~~k~~lt~~V~P~~~e~se~vv~~yNa~lsl~~L~e~sD~~i~idNeaL~~i~~~~l~i~~p~f~~~N~lia~~vs~i 239 (475)
T 3cb2_A 160 RYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCLVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSAS 239 (475)
T ss_dssp HSTTSEEEEEEEECCTTSCCSCTTHHHHHHHHHHHHHHSCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHH
T ss_pred HcCCCceEEEEEECCccccccceeehhHhHHHHHHHHhhCCEEEEeccHHHHHHHhhcCCCCcchHHHHHHHHhhhcccc
Confidence 99999999999999985 678899999999999998
Q ss_pred --------------------------------------------------------------------------------
Q psy17503 194 -------------------------------------------------------------------------------- 193 (277)
Q Consensus 194 -------------------------------------------------------------------------------- 193 (277)
T Consensus 240 T~~lr~pG~lN~Dl~d~~tnLvP~PrlhFl~~s~aP~~s~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~~~~gkyla 319 (475)
T 3cb2_A 240 TTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIA 319 (475)
T ss_dssp TTTTSSSSCTTCSHHHHHHHHCSSTTCCEEEEEEECCC------CCSCCCHHHHHHHTTSGGGBSSCCCCC--CCCCEEE
T ss_pred ccccccCCcccchhhhhcceeecccceeEeecccccccccccccccccCCHHHHHHHHhccccceEecCcccccccchhh
Confidence
Q ss_pred -----------------------------------------------------cccccccchHHHHHHHhhhhhhhhhhc
Q psy17503 194 -----------------------------------------------------MSATFIGNSTCIQDLFKRISDQFNAMF 220 (277)
Q Consensus 194 -----------------------------------------------------~s~~~l~NstsI~~~~~~i~~~f~~m~ 220 (277)
+++++|+|+|+|.++|+++.+||++||
T Consensus 320 ~~~~~RG~v~~~dv~~~i~~ik~k~~~~fv~W~p~~~k~~i~~~~p~~~~~~~~s~~~lsN~TaI~~~f~ri~~kfd~m~ 399 (475)
T 3cb2_A 320 ILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFERTCRQYDKLR 399 (475)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTTCSCBCTTSCCCEEEEEECCCCC-----CCEEEEEEEEGGGHHHHHHHHHHHHHHH
T ss_pred hHHhhcCCCCHHHHHHHHHHhhcccCCccceecCCCceeeeeccCCccCCCcceEEEEecCChHHHHHHHHHHHHHHHHh
Confidence 467899999999999999999999999
Q ss_pred ccccccccccCCCCCc---cchhHHHHHHHHHHHHHHHHhhhcccc
Q psy17503 221 RRKAFLHWYTGEGMDE---MEFTEAESNMIDLVSEYQQYQEATVEE 263 (277)
Q Consensus 221 ~~~aflh~y~~egm~~---~~f~ea~~~l~~l~~~Y~~~~~~~~~~ 263 (277)
+||||||||++|||++ +||+||+++|++|+++|++++.....+
T Consensus 400 ~rrAflHwY~~eGm~e~~~~eF~EA~~~l~~li~eY~~~~~~~~~~ 445 (475)
T 3cb2_A 400 KREAFLEQFRKEDMFKDNFDEMDTSREIVQQLIDEYHAATRPDYIS 445 (475)
T ss_dssp HTTCSCHHHHTSGGGSSCCHHHHHHHHHHHHHHHHHHHTTSGGGSC
T ss_pred hcccceeeecccCccccchhHHHHHHHHHHHHHHHHHHHhhccccC
Confidence 9999999999999987 999999999999999999987665443
No 5
>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*
Probab=100.00 E-value=6.7e-76 Score=558.76 Aligned_cols=259 Identities=36% Similarity=0.695 Sum_probs=243.4
Q ss_pred CeeEEEEecCCchhHHHHHHHHHHHHhhCCCCC-CCccCCCcccccccccccc---cccCCCccccceeeecCCCCcccc
Q psy17503 1 MREIVHVQAGQCGNQIGAKFWEIISAEHGIDPT-GAYHGDKDNQLERINVYYN---EAQGRNVYVPRAILVDLEPGTMDA 76 (277)
Q Consensus 1 M~EiItiq~Gq~GnqiG~~~W~~~~~e~~~~~~-g~~~~~~~~~~~~~~~~F~---e~~~~~~~~pRavlvDle~~~i~~ 76 (277)
|||||+||+||||||||++||+++|.||+|+++ |.++++++. .+++++||+ |+.. ++|+||||+|||||++|++
T Consensus 3 mrEii~iqvGQcGnqIG~~~We~~~~Ehgi~~~~g~~~~~~~~-~~~~~~fF~~~~e~~~-~~~vpRav~vDlep~vi~~ 80 (473)
T 2bto_A 3 VNNTIVVSIGQAGNQIAASFWKTVCLEHGIDPLTGQTAPGVAP-RGNWSSFFSKLGESSS-GSYVPRAIMVDLEPSVIDN 80 (473)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHHHHHHHHTCCTTTCCCSSSCCC-SSSGGGTEEECSCC---CCEEECEEEEESSSHHHHH
T ss_pred cccEEEEecCCcHHHHHHHHHHHHHHhcCCCCCCCeecCCCcc-cccccceecccccccC-CceeeeeeEecCcchhhhh
Confidence 899999999999999999999999999999999 988776555 677899999 9888 9999999999999999999
Q ss_pred cccCCCCCCCCCCCcccccCCCccccCccccCcCcchhhhhHHHHHhhhhccCCCCCeeEEeeCCCCcCCcchhHHHHHH
Q psy17503 77 TRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAENCDCLQGFQLTHSLGGGTGSGMGTLLISKI 156 (277)
Q Consensus 77 i~~~~~~~lf~~~~~i~~~~~~~nnwa~G~~~~g~e~~~~~~d~iR~~~E~cD~lqgf~~~~s~~GGtGSGlgs~lle~l 156 (277)
++.++ +.+|+|++++++++|+|||||+|||+.|+++.++++|+||+++|.||.+|||+++||++||||||+|+.+++++
T Consensus 81 i~~~~-~~lf~p~~~it~~~GAgnn~a~G~~~~G~~~~ee~~d~Ir~~~e~cD~lqgf~i~~slgGGTGSG~~~~l~e~l 159 (473)
T 2bto_A 81 VKATS-GSLFNPANLISRTEGAGGNFAVGYLGAGREVLPEVMSRLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIESL 159 (473)
T ss_dssp HHHHS-TTCSCGGGEEECSSCCTTCHHHHHTSHHHHHHHHHHHHHHHHHHHCSSEEEEEEEEESSSSHHHHHHHHHHHHH
T ss_pred hhccc-cccccccceEecccCCCCCcCCCcchhhHHHHHHHHHHHHHHHHhCCCcceEEEEeeCCCCCCcchHHHHHHHH
Confidence 99998 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccccccceEEeeCCCCCCCceeeecccchhhhhh-------------------------------------------
Q psy17503 157 REEFPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQL------------------------------------------- 193 (277)
Q Consensus 157 ~dey~~~~~~~~~v~p~~~~~~~~v~~yN~~ls~~~l------------------------------------------- 193 (277)
+++||++.+++++|+|+++.++.+++|||++|++++|
T Consensus 160 ~e~y~~~~ilt~~V~P~~~~~e~~v~~yNa~lsl~~L~e~~D~~i~idNeaL~~i~~~~l~i~~~~f~~~N~lia~~v~~ 239 (473)
T 2bto_A 160 KEKYGEIPVLSCAVLPSPQVSSVVTEPYNTVFALNTLRRSADACLIFDNEALFDLAHRKWNIESPTVDDLNLLITEALAG 239 (473)
T ss_dssp HHHTCSSCEEEEEEECCCCSSCEESHHHHHHHHHHHHHHTCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHH
T ss_pred HHHcCCCceEEEEEecCCccccchhhHHHHHHHHHHHHhhCCeEEEeccHHHHHHhccccccCcchHHHHHHHHhhhccc
Confidence 9999999999999999988889999999999999988
Q ss_pred --------------------------------------------------------------------------------
Q psy17503 194 -------------------------------------------------------------------------------- 193 (277)
Q Consensus 194 -------------------------------------------------------------------------------- 193 (277)
T Consensus 240 it~~lr~~g~lN~D~~l~d~~t~LvP~Prlhf~~~~~aPl~s~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~gkyla~ 319 (473)
T 2bto_A 240 ITASMRFSGFLTVEISLRELLTNLVPQPSLHFLMCAFAPLTPPDRSKFEELGIEEMIKSLFDNGSVFAACSPMEGRFLST 319 (473)
T ss_dssp HHHHHHC------CCCHHHHHHHHCSSTTCCEEEEEEECCCCCC-----CCCHHHHHHHHTSGGGBSSSSCGGGSCEEEE
T ss_pred chhhcccCCcccCCccHHhhhhheeecCCcceeeeccccccccchhccccCCHHHHHhhhcccccceeecCCCCchHHHH
Confidence
Q ss_pred ------------------------------------------------cccccccchHHHHHHHhhhhhhhhhhcccccc
Q psy17503 194 ------------------------------------------------MSATFIGNSTCIQDLFKRISDQFNAMFRRKAF 225 (277)
Q Consensus 194 ------------------------------------------------~s~~~l~NstsI~~~~~~i~~~f~~m~~~~af 225 (277)
+++++|+|+|+|.+.|+++.+||++||+||||
T Consensus 320 ~~i~RG~v~~~dv~~~~i~~ik~k~~~~FW~p~~~kv~i~~~pp~g~~~s~~~lsNsTaI~~~~~~l~~kf~~m~~rrAf 399 (473)
T 2bto_A 320 AVLYRGIMEDKPLADAALAAMREKLPLTYWIPTAFKIGYVEQPGISHRKSMVLLANNTEIARVLDRICHNFDKLWQRKAF 399 (473)
T ss_dssp EEEEEEC----CCHHHHHHHHHTTSCBCSSSCCCEEEEEESSCCSSCSEEEEEEEEETTHHHHHHHHHHHHHHHHTTTTT
T ss_pred HHhhcCCCChHHhhHHHHHHHHhhcccceecCCcceecccccCCcCcceeEEEecCCchHHHHHHHHHHHHHHHhhhcch
Confidence 24578999999999999999999999999999
Q ss_pred cccccCCCCCccchhHHHHHHHHHHHHHHHHhhhccc
Q psy17503 226 LHWYTGEGMDEMEFTEAESNMIDLVSEYQQYQEATVE 262 (277)
Q Consensus 226 lh~y~~egm~~~~f~ea~~~l~~l~~~Y~~~~~~~~~ 262 (277)
||||++||||++||+||+++|++|+++|+++.+...+
T Consensus 400 lH~Y~~eGmee~eF~EA~e~l~~l~~eY~~~~~~~~~ 436 (473)
T 2bto_A 400 ANWYLNEGMSEEQINVLRASAQELVQSYQVAEESGAK 436 (473)
T ss_dssp HHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred hHHhhccCCcHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999999999999776544
No 6
>3m89_A FTSZ/tubulin-related protein; partition, TUBZ, GTP-binding, nucleotide-BIND structural protein; HET: GSP; 2.00A {Bacillus thuringiensis} PDB: 3m8k_A 2xka_A* 2xkb_A*
Probab=99.87 E-value=2.6e-23 Score=192.16 Aligned_cols=151 Identities=20% Similarity=0.215 Sum_probs=117.8
Q ss_pred EEEEecCCchhHHHHHHHHHHHHhhCCCCCCCccCCCcccccccccccccccCCCccccceeeecCCCCcccccccCCCC
Q psy17503 4 IVHVQAGQCGNQIGAKFWEIISAEHGIDPTGAYHGDKDNQLERINVYYNEAQGRNVYVPRAILVDLEPGTMDATRSGPYG 83 (277)
Q Consensus 4 iItiq~Gq~GnqiG~~~W~~~~~e~~~~~~g~~~~~~~~~~~~~~~~F~e~~~~~~~~pRavlvDle~~~i~~i~~~~~~ 83 (277)
|..|-+||+|+.+.+++.+ ++ ++ + +++.||+|+||+++..++.++.++.
T Consensus 45 i~VIGvGg~G~n~v~~m~~-----~~---------------------~~---~-g~~~~~~iavNtd~~dl~~L~~~~~- 93 (427)
T 3m89_A 45 WGVIGAGQKGNKEADLFAG-----YK---------------------FS---N-GTTCYPTLAVNFAESDMMHLQNIIK- 93 (427)
T ss_dssp EEEEEEHHHHHHHHHHHTT-----CB---------------------CT---T-SCBSCCEEEEESSGGGGTTCSSSCG-
T ss_pred EEEEEECCcHHHHHHHHHH-----hC---------------------cc---c-CCcCceEEEEECCHHHHHHHhcCCC-
Confidence 6678999999999988821 11 00 2 6789999999999999998877653
Q ss_pred CCCCCCCc-ccccCCCccccCccccCcC-----cc--hhhhhHHHHHhhhh---ccCCCCCeeEEeeCCCCcCCcchhHH
Q psy17503 84 QIFRPDNF-VFGQSGAGNNWAKGHYTEG-----AE--LVDSVLDVVRKEAE---NCDCLQGFQLTHSLGGGTGSGMGTLL 152 (277)
Q Consensus 84 ~lf~~~~~-i~~~~~~~nnwa~G~~~~g-----~e--~~~~~~d~iR~~~E---~cD~lqgf~~~~s~~GGtGSGlgs~l 152 (277)
++.+ +.++.|+|+||+.|++..| .+ +.++|.+.||+.+| .||.+++|+++++++||||||+|+.+
T Consensus 94 ----~~~i~l~G~~GAG~np~~G~~~ag~~~~~~e~~~~d~I~~~I~~~~e~~~~cd~~d~f~I~aglGGGTGSG~gp~l 169 (427)
T 3m89_A 94 ----EDRIHFDGLKGAARTPSVVTDLFDPETNPNANGYLDKLAQELGRKFTNEEGEVIVDQFLICLGAGGGVGTGWGSLV 169 (427)
T ss_dssp ----GGEEEC-----------CHHHHHSSSSSTTHHHHHHHHHHHHHHHSBCTTSCBCCSEEEEEEETTSHHHHHHHHHH
T ss_pred ----cceEEecCCCCCCCCHHHHHHHhhcccCcccchHHHHHHHHHHHHhhccccCCCCCEEEEeeecCCCccccHHHHH
Confidence 3333 4677899999999998874 54 49999999999999 88999999999999999999999999
Q ss_pred HHHHHhhccccccceEEeeCCCCCCCceeeecccchhhhhh
Q psy17503 153 ISKIREEFPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQL 193 (277)
Q Consensus 153 le~l~dey~~~~~~~~~v~p~~~~~~~~v~~yN~~ls~~~l 193 (277)
++.++++|+++++.+++++|++.. ..+||+.++++.|
T Consensus 170 a~~lke~~~~~~~~~vvt~P~~~e----~~~~NA~~~l~~L 206 (427)
T 3m89_A 170 LQLIREQFFPCPVSMLISLPSGDP----DEINNALVLLSEI 206 (427)
T ss_dssp HHHHHTTCSSSCEEEEEEECCSCH----HHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCcEEEEEEECCCCc----cHHHHHHHHHHHH
Confidence 999999999999999999998653 3459999999986
No 7
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1
Probab=99.87 E-value=4.2e-23 Score=189.23 Aligned_cols=154 Identities=18% Similarity=0.228 Sum_probs=117.3
Q ss_pred CeeEEEEecCCchhHHHHHHHHHHHHhhCCCCCCCccCCCcccccccccccccccCCCccccceeeecCCCCcccccccC
Q psy17503 1 MREIVHVQAGQCGNQIGAKFWEIISAEHGIDPTGAYHGDKDNQLERINVYYNEAQGRNVYVPRAILVDLEPGTMDATRSG 80 (277)
Q Consensus 1 M~EiItiq~Gq~GnqiG~~~W~~~~~e~~~~~~g~~~~~~~~~~~~~~~~F~e~~~~~~~~pRavlvDle~~~i~~i~~~ 80 (277)
|++|++|++|||||+++++||+ |+++. ++.+.++++.+.++.+..
T Consensus 21 ~~~I~vIGvGg~G~n~vn~m~~-----~gi~g-----------------------------v~~ia~nTD~q~L~~~~a- 65 (353)
T 1w5f_A 21 NLKIKVIGVGGAGNNAINRMIE-----IGIHG-----------------------------VEFVAVNTDLQVLEASNA- 65 (353)
T ss_dssp -CCEEEEEEHHHHHHHHHHHHH-----HCCTT-----------------------------EEEEEEESCHHHHHTCCC-
T ss_pred CCEEEEECcCchHHHHHHHHHH-----hCCCC-----------------------------CCEEEEcCCHHHHhcCCC-
Confidence 4789999999999999999998 55421 244666666665554332
Q ss_pred CCCCCCCCCCccc-----ccCCCccccCccccCcCcchhhhhHHHHHhhhhccCCCCCeeEEeeCCCCcCCcchhHHHHH
Q psy17503 81 PYGQIFRPDNFVF-----GQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAENCDCLQGFQLTHSLGGGTGSGMGTLLISK 155 (277)
Q Consensus 81 ~~~~lf~~~~~i~-----~~~~~~nnwa~G~~~~g~e~~~~~~d~iR~~~E~cD~lqgf~~~~s~~GGtGSGlgs~lle~ 155 (277)
|+.+.. ...|+||||+.| ++..++..|.||+.+|.|| +|+++||++||||||+++.+++.
T Consensus 66 -------~~~i~iG~~~t~G~GAG~n~~~G-----~~~aee~~d~I~~~le~~d---~~~i~as~GGGTGSG~ap~la~~ 130 (353)
T 1w5f_A 66 -------DVKIQIGENITRGLGAGGRPEIG-----EQAALESEEKIREVLQDTH---MVFITAGFGGGTGTGASPVIAKI 130 (353)
T ss_dssp -------SEEEECCTTTTTTSCCTTCHHHH-----HHHHHHTHHHHHHHTTTCS---EEEEEEETTSSHHHHHHHHHHHH
T ss_pred -------CcEEEccCcccCCCCCCCChHHH-----HHHHHHHHHHHHHHHccCC---EEEEEeccCCCccccHHHHHHHH
Confidence 222333 335899999855 7888999999999999998 49999999999999999999988
Q ss_pred HHhhccccccceEEeeCCCCCCCceeeecccchhhhhh---cccccccchHHHHHH
Q psy17503 156 IREEFPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQL---MSATFIGNSTCIQDL 208 (277)
Q Consensus 156 l~dey~~~~~~~~~v~p~~~~~~~~v~~yN~~ls~~~l---~s~~~l~NstsI~~~ 208 (277)
+++ |+ +.+++|+|.|+..+..++|||+.+++++| .+.+++-.|.++.++
T Consensus 131 ~ke-~g---~lt~~Vvt~Pf~~Eg~~~~~nA~~~l~~L~e~~D~~ividNeaL~~i 182 (353)
T 1w5f_A 131 AKE-MG---ILTVAIVTTPFYFEGPERLKKAIEGLKKLRKHVDTLIKISNNKLMEE 182 (353)
T ss_dssp HHH-TT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHTT
T ss_pred HHH-hC---CcEEEEEeCCcccccchhHHHHHHHHHHHHhhCCEEEEEecHHHHhh
Confidence 886 65 66778887777778889999999999999 334444444444443
No 8
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=99.85 E-value=4.4e-22 Score=180.67 Aligned_cols=154 Identities=17% Similarity=0.226 Sum_probs=117.6
Q ss_pred eEEEEecCCchhHHHHHHHHHHHHhhCCCCCCCccCCCcccccccccccccccCCCccccceeeecCCCCcccccccCCC
Q psy17503 3 EIVHVQAGQCGNQIGAKFWEIISAEHGIDPTGAYHGDKDNQLERINVYYNEAQGRNVYVPRAILVDLEPGTMDATRSGPY 82 (277)
Q Consensus 3 EiItiq~Gq~GnqiG~~~W~~~~~e~~~~~~g~~~~~~~~~~~~~~~~F~e~~~~~~~~pRavlvDle~~~i~~i~~~~~ 82 (277)
+|++|++||||++++++||+ |+++ + ++.+.++++.+.++.++.
T Consensus 13 ~I~viGvGg~G~n~v~~m~~-----~gi~--------------------------g---v~~i~~ntD~q~L~~~~a--- 55 (320)
T 1ofu_A 13 VIKVIGVGGGGGNAVNHMAK-----NNVE--------------------------G---VEFICANTDAQALKNIAA--- 55 (320)
T ss_dssp CEEEEEEHHHHHHHHHHHHH-----TTCC--------------------------S---EEEEEEESBTGGGSSCSC---
T ss_pred EEEEECcCchHHHHHHHHHH-----hCCC--------------------------C---CCEEEEcCCHHHHhcCCC---
Confidence 69999999999999999998 5432 0 245777777776655432
Q ss_pred CCCCCCCCcccc-----cCCCccccCccccCcCcchhhhhHHHHHhhhhccCCCCCeeEEeeCCCCcCCcchhHHHHHHH
Q psy17503 83 GQIFRPDNFVFG-----QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAENCDCLQGFQLTHSLGGGTGSGMGTLLISKIR 157 (277)
Q Consensus 83 ~~lf~~~~~i~~-----~~~~~nnwa~G~~~~g~e~~~~~~d~iR~~~E~cD~lqgf~~~~s~~GGtGSGlgs~lle~l~ 157 (277)
|+.+..+ ..|+||||+.| ++..++..|.||+.+|.|| +|+++||++||||||+++.++ ++.
T Consensus 56 -----~~~i~iG~~~t~g~GAG~n~~~G-----~~~~ee~~d~I~~~le~~d---~~~i~as~GGGTGSG~~~~la-~~a 121 (320)
T 1ofu_A 56 -----RTVLQLGPGVTKGLGAGANPEVG-----RQAALEDRERISEVLEGAD---MVFITTGMGGGTGTGAAPIIA-EVA 121 (320)
T ss_dssp -----SEEEECCHHHHTTBCCCSCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHH-HHH
T ss_pred -----CcEEEccCCccCCCCCCCCHHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHH-HHH
Confidence 3334444 35899999855 7888999999999999998 499999999999999999765 566
Q ss_pred hhccccccceEEeeCCCCCCCceeeecccchhhhhh---cccccccchHHHHHHHh
Q psy17503 158 EEFPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQL---MSATFIGNSTCIQDLFK 210 (277)
Q Consensus 158 dey~~~~~~~~~v~p~~~~~~~~v~~yN~~ls~~~l---~s~~~l~NstsI~~~~~ 210 (277)
.+|+ +.+++|+|.|+..+..++|||+.+++++| .+.+++-.|.++.+++.
T Consensus 122 ~e~g---~lt~~vv~~P~~~Eg~~~~~nA~~~l~~L~e~~D~~ividNe~L~~i~~ 174 (320)
T 1ofu_A 122 KEMG---ILTVAVVTRPFPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILG 174 (320)
T ss_dssp HHTT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHG
T ss_pred HhcC---CcEEEEEeCCccccchhHHHHHHHHHHHHHHhCCEEEEEecHHhhhhhh
Confidence 7774 56677777776677789999999999999 34445555555655544
No 9
>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A*
Probab=99.85 E-value=1.3e-22 Score=187.47 Aligned_cols=143 Identities=20% Similarity=0.214 Sum_probs=107.7
Q ss_pred eeEEEEecCCchhHHHHHHHHHHHHhhCCCCCCCccCCCcccccccccccccccCCCccccceeeecCCCCcccccccCC
Q psy17503 2 REIVHVQAGQCGNQIGAKFWEIISAEHGIDPTGAYHGDKDNQLERINVYYNEAQGRNVYVPRAILVDLEPGTMDATRSGP 81 (277)
Q Consensus 2 ~EiItiq~Gq~GnqiG~~~W~~~~~e~~~~~~g~~~~~~~~~~~~~~~~F~e~~~~~~~~pRavlvDle~~~i~~i~~~~ 81 (277)
.+|++|++||||++++++||+ |+++ | ++.+.+|++...++.++..
T Consensus 12 ~~I~vIGvGg~G~n~vn~m~~-----~gi~--g---------------------------v~fia~NTD~q~L~~~~a~- 56 (382)
T 1rq2_A 12 AVIKVVGIGGGGVNAVNRMIE-----QGLK--G---------------------------VEFIAINTDAQALLMSDAD- 56 (382)
T ss_dssp CCEEEEEEHHHHHHHHHHHHH-----TTCC--S---------------------------EEEEEEESCHHHHHHCCCS-
T ss_pred CEEEEECcCchHHHHHHHHHH-----hCCC--C---------------------------CCEEEecCCHHHHhcCCCC-
Confidence 479999999999999999998 5442 0 2456777776665554321
Q ss_pred CCCCCCCCCcccccCCCccccCccccCcCcchhhhhHHHHHhhhhccCCCCCeeEEeeCCCCcCCcchhHHHHHHHhhcc
Q psy17503 82 YGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFP 161 (277)
Q Consensus 82 ~~~lf~~~~~i~~~~~~~nnwa~G~~~~g~e~~~~~~d~iR~~~E~cD~lqgf~~~~s~~GGtGSGlgs~lle~l~dey~ 161 (277)
..+.-.+ .++...|+||||+.| ++..++..|.||+.+|.|| +|+|+||++||||||+++.|++ ++.+|+
T Consensus 57 -~~i~iG~-~~t~G~GAG~n~~~G-----~~~aee~~d~Ir~~le~~d---~~fi~as~GGGTGSG~ap~lae-la~e~g 125 (382)
T 1rq2_A 57 -VKLDVGR-DSTRGLGAGADPEVG-----RKAAEDAKDEIEELLRGAD---MVFVTAGEGGGTGTGGAPVVAS-IARKLG 125 (382)
T ss_dssp -EEEECCT-TTC-----CCCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-HHHHHT
T ss_pred -cEEEecc-cccCCCCCCCChHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHH-HHHHcC
Confidence 0111111 123345899999865 6888999999999999998 5999999999999999999998 778887
Q ss_pred ccccceEEeeCCCCCCCceeeecccchhhhhh
Q psy17503 162 DRIMNTYSVVPSPKVSDTVVEPYNATLSVHQL 193 (277)
Q Consensus 162 ~~~~~~~~v~p~~~~~~~~v~~yN~~ls~~~l 193 (277)
+.+++|+|.|+..+..++|||+.++++.|
T Consensus 126 ---~ltvsVv~~Pf~~Eg~~~~~nA~l~l~~L 154 (382)
T 1rq2_A 126 ---ALTVGVVTRPFSFEGKRRSNQAENGIAAL 154 (382)
T ss_dssp ---CEEEEEEEECCGGGCHHHHHHHHHHHHHH
T ss_pred ---CcEEEEEecCcccccchHHHHHHHHHHHH
Confidence 56667777777778899999999999999
No 10
>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=99.85 E-value=5.5e-22 Score=183.90 Aligned_cols=155 Identities=17% Similarity=0.214 Sum_probs=120.6
Q ss_pred eeEEEEecCCchhHHHHHHHHHHHHhhCCCCCCCccCCCcccccccccccccccCCCccccceeeecCCCCcccccccCC
Q psy17503 2 REIVHVQAGQCGNQIGAKFWEIISAEHGIDPTGAYHGDKDNQLERINVYYNEAQGRNVYVPRAILVDLEPGTMDATRSGP 81 (277)
Q Consensus 2 ~EiItiq~Gq~GnqiG~~~W~~~~~e~~~~~~g~~~~~~~~~~~~~~~~F~e~~~~~~~~pRavlvDle~~~i~~i~~~~ 81 (277)
.+|++|++||||++++++||+ |+++ + .+.+.++++.+.++.+..
T Consensus 12 ~~I~vIGvGg~G~n~vn~m~~-----~gi~--------------------------g---v~fia~NTD~q~L~~~~a-- 55 (394)
T 2vaw_A 12 AVIKVIGVGGGGGNAVNHMAK-----NNVE--------------------------G---VEFICANTDAQALKNIAA-- 55 (394)
T ss_dssp CCEEEEEEHHHHHHHHHHHHT-----TTCC--------------------------S---EEEEEEESCTTTTSSCSS--
T ss_pred CEEEEECcCchHHHHHHHHHH-----cCCC--------------------------C---CCEEEecCCHHHHhcCCC--
Confidence 479999999999999999997 5442 1 245777777776654432
Q ss_pred CCCCCCCCCcccc-----cCCCccccCccccCcCcchhhhhHHHHHhhhhccCCCCCeeEEeeCCCCcCCcchhHHHHHH
Q psy17503 82 YGQIFRPDNFVFG-----QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAENCDCLQGFQLTHSLGGGTGSGMGTLLISKI 156 (277)
Q Consensus 82 ~~~lf~~~~~i~~-----~~~~~nnwa~G~~~~g~e~~~~~~d~iR~~~E~cD~lqgf~~~~s~~GGtGSGlgs~lle~l 156 (277)
|+.+..| ..|+||||+.| ++..++..|.||+.+|.|| +|+|+||++||||||+++.|++.+
T Consensus 56 ------~~ki~iG~~~t~G~GAG~n~~~G-----~~~aee~~d~I~~~le~~d---~~fI~asmGGGTGSG~ap~lae~~ 121 (394)
T 2vaw_A 56 ------RTVLQLGPGVTKGLGAGANPEVG-----RQAALEDRERISEVLEGAD---MVFITTGMGGGTGTGAAPIIAEVA 121 (394)
T ss_dssp ------SCEEECCHHHHSSSCCCSCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHHHH
T ss_pred ------CcEEEccccccCCCCCCCCHHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHHHH
Confidence 3344444 35899999855 6888999999999999998 499999999999999999999998
Q ss_pred HhhccccccceEEeeCCCCCCCceeeecccchhhhhh---cccccccchHHHHHHHh
Q psy17503 157 REEFPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQL---MSATFIGNSTCIQDLFK 210 (277)
Q Consensus 157 ~dey~~~~~~~~~v~p~~~~~~~~v~~yN~~ls~~~l---~s~~~l~NstsI~~~~~ 210 (277)
+ +|+ +.+++|+|.|+..+..++|||+.++++.| .+.+++-.|.++.+++.
T Consensus 122 k-e~g---~ltvsVv~~Pf~~Eg~~r~ynA~~~l~~L~e~~D~~ividNeaL~~i~~ 174 (394)
T 2vaw_A 122 K-EMG---ILTVAVVTRPFPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILG 174 (394)
T ss_dssp H-HHT---CEEEEEEEECCGGGHHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHG
T ss_pred H-HcC---CcEEEEecCCcccccchhhHHHHHHHHHHHHhCCEEEEEecHHHHHHhh
Confidence 8 564 56777887777677789999999999999 33445555555665543
No 11
>2vap_A FTSZ, cell division protein FTSZ homolog 1; polymerization, tubulin homolog, GTPase, septation, cell cycle, GTP-binding; HET: GDP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.32.1.1 d.79.2.1 PDB: 1w59_A 1w58_1* 1w5a_A* 1w5b_A* 1fsz_A* 1w5e_A*
Probab=99.85 E-value=1.5e-22 Score=186.03 Aligned_cols=142 Identities=23% Similarity=0.319 Sum_probs=108.7
Q ss_pred eEEEEecCCchhHHHHHHHHHHHHhhCCCCCCCccCCCcccccccccccccccCCCccccceeeecCCCCcccccccCCC
Q psy17503 3 EIVHVQAGQCGNQIGAKFWEIISAEHGIDPTGAYHGDKDNQLERINVYYNEAQGRNVYVPRAILVDLEPGTMDATRSGPY 82 (277)
Q Consensus 3 EiItiq~Gq~GnqiG~~~W~~~~~e~~~~~~g~~~~~~~~~~~~~~~~F~e~~~~~~~~pRavlvDle~~~i~~i~~~~~ 82 (277)
+|++|++|||||+++++||+. +++.. ..+.++++.+.++.+...
T Consensus 39 ~I~vIGvGg~G~n~v~~m~~~-----gi~gv-----------------------------~fia~NTD~q~L~~~~a~-- 82 (364)
T 2vap_A 39 KITVVGCGGAGNNTITRLKME-----GIEGA-----------------------------KTVAINTDAQQLIRTKAD-- 82 (364)
T ss_dssp CEEEEEEHHHHHHHHHHHHHH-----TCTTE-----------------------------EEEEEESBHHHHHTSCCS--
T ss_pred eEEEEeeCchHHHHHHHHHHh-----CCCCC-----------------------------CEEEEcCcHHHHhcCCCC--
Confidence 699999999999999999983 43210 124445544444333210
Q ss_pred CCCCCCCCcccccCCCccccCccccCcCcchhhhhHHHHHhhhhccCCCCCeeEEeeCCCCcCCcchhHHHHHHHhhccc
Q psy17503 83 GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPD 162 (277)
Q Consensus 83 ~~lf~~~~~i~~~~~~~nnwa~G~~~~g~e~~~~~~d~iR~~~E~cD~lqgf~~~~s~~GGtGSGlgs~lle~l~dey~~ 162 (277)
..++-.. .++...|+||||++| ++..++..|.||+.+|.||.+ +++||++||||||+++.+++.+++ |
T Consensus 83 ~ki~iG~-~~t~G~GAGnn~a~G-----~~~~ee~~d~Ir~~le~~D~l---~i~as~GGGTGSG~ap~lae~lke-~-- 150 (364)
T 2vap_A 83 KKILIGK-KLTRGLGAGGNPKIG-----EEAAKESAEEIKAAIQDSDMV---FITCGLGGGTGTGSAPVVAEISKK-I-- 150 (364)
T ss_dssp EEEECCT-TTTTTBCCTTCHHHH-----HHHHHHTHHHHHHHHTTCSEE---EEEEETTSSHHHHHHHHHHHHHHH-T--
T ss_pred cEEEecc-ccccCCCCCCChHHH-----HHHHHHHHHHHHHHHhcCCEE---EEeccCCCCCCCChHHHHHHHHHH-h--
Confidence 0111111 123345899999988 789999999999999999988 999999999999999999999997 7
Q ss_pred cccceEEeeCCCCCCCceeeecccchhhhhh
Q psy17503 163 RIMNTYSVVPSPKVSDTVVEPYNATLSVHQL 193 (277)
Q Consensus 163 ~~~~~~~v~p~~~~~~~~v~~yN~~ls~~~l 193 (277)
.+.+++|+|.|+..+.+++|||+.++++.|
T Consensus 151 -~~lt~~Vv~~Pf~~eg~~~~ynA~~~l~~L 180 (364)
T 2vap_A 151 -GALTVAVVTLPFVMEGKVRMKNAMEGLERL 180 (364)
T ss_dssp -TCEEEEEEEECCGGGCHHHHHHHHHHHHHH
T ss_pred -CCcEEEEeCCCccccchhHHHHHHHHHHHH
Confidence 366778888887677799999999999999
No 12
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*
Probab=99.83 E-value=8.9e-22 Score=181.80 Aligned_cols=154 Identities=18% Similarity=0.282 Sum_probs=119.3
Q ss_pred eeEEEEecCCchhHHHHHHHHHHHHhhCCCCCCCccCCCcccccccccccccccCCCccccceeeecCCCCcccccccCC
Q psy17503 2 REIVHVQAGQCGNQIGAKFWEIISAEHGIDPTGAYHGDKDNQLERINVYYNEAQGRNVYVPRAILVDLEPGTMDATRSGP 81 (277)
Q Consensus 2 ~EiItiq~Gq~GnqiG~~~W~~~~~e~~~~~~g~~~~~~~~~~~~~~~~F~e~~~~~~~~pRavlvDle~~~i~~i~~~~ 81 (277)
.+|+.|++||||+++++++|+ |+++. ++.+.+|++...++.+..
T Consensus 12 ~~I~vIGvGg~G~navn~m~~-----~gi~g-----------------------------v~fia~NTD~q~L~~~~a-- 55 (382)
T 2vxy_A 12 ASIKVIGVGGGGNNAVNRMIE-----NEVQG-----------------------------VEYIAVNTDAQALNLSKA-- 55 (382)
T ss_dssp CCEEEEEEHHHHHHHHHHHHH-----TTCCS-----------------------------CEEEEEESBHHHHHTCCC--
T ss_pred CEEEEEeeCchHHHHHHHHHH-----hCCCC-----------------------------CCEEEEeCCHHHHhcCCC--
Confidence 469999999999999999997 44321 345777777666655432
Q ss_pred CCCCCCCCCcccc-----cCCCccccCccccCcCcchhhhhHHHHHhhhhccCCCCCeeEEeeCCCCcCCcchhHHHHHH
Q psy17503 82 YGQIFRPDNFVFG-----QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAENCDCLQGFQLTHSLGGGTGSGMGTLLISKI 156 (277)
Q Consensus 82 ~~~lf~~~~~i~~-----~~~~~nnwa~G~~~~g~e~~~~~~d~iR~~~E~cD~lqgf~~~~s~~GGtGSGlgs~lle~l 156 (277)
|+.+..| ..|+||||+.| ++..++..|.||+.+|.|| +|+|+||++||||||+++.|++.+
T Consensus 56 ------~~ki~iG~~~t~G~GAGnn~a~G-----~e~aee~~d~Ir~~le~~D---~ffI~asmGGGTGSG~apvla~~a 121 (382)
T 2vxy_A 56 ------EVKMQIGAKLTRGLGAGANPEVG-----KKAAEESKEQIEEALKGAD---MVFVTAGMGGGTGTGAAPVIAQIA 121 (382)
T ss_dssp ------SEEEECCHHHHTTBCCTTCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEESSSSHHHHHHHHHHHHH
T ss_pred ------CcEEEecccccCCCCCCCChHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeccCCCCCCcHHHHHHHHH
Confidence 2233333 35899999855 7888999999999999998 499999999999999999998877
Q ss_pred HhhccccccceEEeeCCCCCCCceeeecccchhhhhh---cccccccchHHHHHHH
Q psy17503 157 REEFPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQL---MSATFIGNSTCIQDLF 209 (277)
Q Consensus 157 ~dey~~~~~~~~~v~p~~~~~~~~v~~yN~~ls~~~l---~s~~~l~NstsI~~~~ 209 (277)
++ |+ +.+++|+|.|+..+..++|||+.++++.| .+.+++-.|.++.+++
T Consensus 122 ke-~g---~ltvsVvt~Pf~~Eg~~r~~nA~l~l~~L~e~~D~~ividNeaL~~i~ 173 (382)
T 2vxy_A 122 KD-LG---ALTVGVVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIV 173 (382)
T ss_dssp HH-TT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHS
T ss_pred HH-hC---CCeEEEEeCCcccccchhHHHHHHHHHHHHHhCCEEEEEccHHHHHHH
Confidence 75 75 66777888887778899999999999999 3444555555555544
No 13
>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1*
Probab=99.83 E-value=4.9e-22 Score=181.50 Aligned_cols=152 Identities=22% Similarity=0.341 Sum_probs=122.3
Q ss_pred eEEEEecCCchhHHHHHHHHHHHHhhCCCCCCCccCCCcccccccccccccccCCCccccceeeecCCCCcccccccCCC
Q psy17503 3 EIVHVQAGQCGNQIGAKFWEIISAEHGIDPTGAYHGDKDNQLERINVYYNEAQGRNVYVPRAILVDLEPGTMDATRSGPY 82 (277)
Q Consensus 3 EiItiq~Gq~GnqiG~~~W~~~~~e~~~~~~g~~~~~~~~~~~~~~~~F~e~~~~~~~~pRavlvDle~~~i~~i~~~~~ 82 (277)
.|..|.+||+|+++.+++|+ +++. + ++.|.+|+|+..++..+.
T Consensus 9 ~I~viGvGg~G~n~vn~m~~-----~~~~--------------------------g---v~~ia~NTD~q~L~~~~a--- 51 (338)
T 2r75_1 9 KIKVIGVGGGGSNAVNRMYE-----DGIE--------------------------G---VELYAINTDVQHLSTLKV--- 51 (338)
T ss_dssp CEEEEEEHHHHHHHHHHHHH-----TTCC--------------------------S---CEEEEEESBHHHHHTCCC---
T ss_pred eEEEEeeCccHHHHHHHHHH-----hCCC--------------------------C---ceEEEEECCHHHHhcCCC---
Confidence 48899999999999999997 2210 1 577999999888776543
Q ss_pred CCCCCCCCcccc-----cCCCccccCccccCcCcchhhhhHHHHHhhhhccCCCCCeeEEeeCCCCcCCcchhHHHHHHH
Q psy17503 83 GQIFRPDNFVFG-----QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAENCDCLQGFQLTHSLGGGTGSGMGTLLISKIR 157 (277)
Q Consensus 83 ~~lf~~~~~i~~-----~~~~~nnwa~G~~~~g~e~~~~~~d~iR~~~E~cD~lqgf~~~~s~~GGtGSGlgs~lle~l~ 157 (277)
|+.+..| ..|+||||+.| ++..+++.|.||+.+|.||.+ +++||++||||||+++. +++++
T Consensus 52 -----~~ki~iG~~~t~g~GAGnn~a~G-----~~~~ee~~d~Ir~~~e~~D~l---~i~~s~GGGTGSG~~~~-ia~l~ 117 (338)
T 2r75_1 52 -----PNKIQIGEKVTRGLGAGAKPEVG-----EEAALEDIDKIKEILRDTDMV---FISAGLGGGTGTGAAPV-IAKTA 117 (338)
T ss_dssp -----SEEEECCHHHHTTBCCTTCHHHH-----HHHHHHTHHHHHHHHSSCSEE---EEEEETTSSHHHHHHHH-HHHHH
T ss_pred -----CcEEEecCcccCCCCCCCChHHH-----HHHHHHHHHHHHHHHccCCee---EEecccCCCcCCCchHH-HHHHH
Confidence 3334444 47999999966 789999999999999999998 99999999999999999 88889
Q ss_pred hhccccccceEEeeCCCCCCCceeeecccchhhhhh---cccccccchHHHHHH
Q psy17503 158 EEFPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQL---MSATFIGNSTCIQDL 208 (277)
Q Consensus 158 dey~~~~~~~~~v~p~~~~~~~~v~~yN~~ls~~~l---~s~~~l~NstsI~~~ 208 (277)
++|| +.+++|+|.|+..+.+++|||+.++++.| .+.+++-.|.++.++
T Consensus 118 ~e~g---~lt~~Vv~~P~~~eg~~~~ynA~~~l~~L~e~~D~~ividNe~L~~i 168 (338)
T 2r75_1 118 KEMG---ILTVAVATLPFRFEGPRKMEKALKGLEKLKESSDAYIVIHNDKIKEL 168 (338)
T ss_dssp HHTT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHHT
T ss_pred HhcC---CCEEEEeCCCccccchhhHHHHHHHHHHHHhcCCeEEEeccHHHHhh
Confidence 9997 67888999888788899999999999999 333444344444433
No 14
>3v3t_A Cell division GTPase FTSZ, diverged; TUBZ, tubulin/FTSZ related, rossmann fold, GTP bindi structural protein; 2.30A {Clostridium botulinum C}
Probab=99.79 E-value=7.4e-20 Score=166.21 Aligned_cols=143 Identities=17% Similarity=0.312 Sum_probs=107.8
Q ss_pred EEEEecCCchhHHHHHHHHHHHHhhCCCCCCCccCCCcccccccccccccccCCCccccceeeecCCCCcccccccCCCC
Q psy17503 4 IVHVQAGQCGNQIGAKFWEIISAEHGIDPTGAYHGDKDNQLERINVYYNEAQGRNVYVPRAILVDLEPGTMDATRSGPYG 83 (277)
Q Consensus 4 iItiq~Gq~GnqiG~~~W~~~~~e~~~~~~g~~~~~~~~~~~~~~~~F~e~~~~~~~~pRavlvDle~~~i~~i~~~~~~ 83 (277)
|..|.+|++|+.+.+++.+. +. + -..+.++++...+..+..-+
T Consensus 7 I~VIGvGGaG~Nav~~m~~~-----~~---~---------------------------v~~iaiNTD~q~L~~~~~~~-- 49 (360)
T 3v3t_A 7 IVFAPIGQGGGNIVDTLLGI-----CG---D---------------------------YNALFINTSKKDLDSLKHAK-- 49 (360)
T ss_dssp EEEEEBSHHHHHHHHHHHHH-----CT---T---------------------------SEECEEESCHHHHHTCSSCS--
T ss_pred EEEEEeCCcHHHHHHHHHHc-----CC---C---------------------------ceEEEEECCHHHHhhCCCCc--
Confidence 77899999999999998642 10 0 12355555554444332100
Q ss_pred CCCCCCCcccccCCCccccCccccCcCcchhhhhH-HHHHhhhhccCCCCCeeEEeeCCCCcCCcchhHHHHHHHhhccc
Q psy17503 84 QIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL-DVVRKEAENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPD 162 (277)
Q Consensus 84 ~lf~~~~~i~~~~~~~nnwa~G~~~~g~e~~~~~~-d~iR~~~E~cD~lqgf~~~~s~~GGtGSGlgs~lle~l~dey~~ 162 (277)
.+-++..-.|+|+||+.| ++..+... |.||+.+|.|+.+|+|+++||++||||||+++.|++.++++||+
T Consensus 50 ----~ki~ig~GlGAG~np~vG-----~eaaee~~~d~Ir~~le~c~g~dgffI~aslGGGTGSG~~pvLae~lke~~~~ 120 (360)
T 3v3t_A 50 ----HTYHIPYAEGCGKERKKA-----VGYAQTYYKQIIAQIMEKFSSCDIVIFVATMAGGAGSGITPPILGLAKQMYPN 120 (360)
T ss_dssp ----CEEECC------CCHHHH-----HHHHGGGHHHHHHHHHHHTTTCSEEEEEEETTSHHHHHHHHHHHHHHHHHCTT
T ss_pred ----cEEEcCCCCCCCCCHHHH-----HHHHHHhHHHHHHHHHhcCCCCCeEEEeeccCCCccccHHHHHHHHHHHhCCC
Confidence 011122235899998765 67788888 99999999999999999999999999999999999999999999
Q ss_pred cccceEEeeCCCCCCCceeeecccchhhhhhc
Q psy17503 163 RIMNTYSVVPSPKVSDTVVEPYNATLSVHQLM 194 (277)
Q Consensus 163 ~~~~~~~v~p~~~~~~~~v~~yN~~ls~~~l~ 194 (277)
+++..++++|+++ +.+++|||+++++++|.
T Consensus 121 k~v~~vtV~Pf~~--Egvv~pyNA~l~l~~L~ 150 (360)
T 3v3t_A 121 KHFGFVGVLPKAT--EDIDEHMNAIACWNDIM 150 (360)
T ss_dssp SEEEEEEEECCTT--SCHHHHHHHHHHHHHHH
T ss_pred CeEEEEEEeCCCc--cchhhHHHHHHHHHHHH
Confidence 9999999999876 45899999999999993
No 15
>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A*
Probab=99.59 E-value=1.4e-16 Score=146.14 Aligned_cols=136 Identities=21% Similarity=0.352 Sum_probs=102.1
Q ss_pred EEEEecCCchhHHHHHHHHHHHHhhCCCCCCCccCCCcccccccccccccccCCCccccceeeecCCCCcccccccCCCC
Q psy17503 4 IVHVQAGQCGNQIGAKFWEIISAEHGIDPTGAYHGDKDNQLERINVYYNEAQGRNVYVPRAILVDLEPGTMDATRSGPYG 83 (277)
Q Consensus 4 iItiq~Gq~GnqiG~~~W~~~~~e~~~~~~g~~~~~~~~~~~~~~~~F~e~~~~~~~~pRavlvDle~~~i~~i~~~~~~ 83 (277)
|..|-+|++|+.+-+++.+. ++. + ...|.++++...+.....
T Consensus 20 IkVIGVGG~G~NaVn~m~~~-----~~~--------------------------g---vefiaiNTD~qaL~~s~a---- 61 (396)
T 4dxd_A 20 LKVIGVGGGGNNAVNRMIDH-----GMN--------------------------N---VEFIAINTDGQALNLSKA---- 61 (396)
T ss_dssp EEEEEEHHHHHHHHHHHHHH-----CCC--------------------------S---EEEEEEESCHHHHHTCCC----
T ss_pred EEEEEECCcHHHHHHHHHHh-----CCC--------------------------C---ceEEEEECCHHHHhcCCC----
Confidence 67789999999888887542 211 0 122566666554433321
Q ss_pred CCCCCCCccccc-----CCCccccCccccCcCcchhhhhHHHHHhhhhccCCCCCeeEEeeCCCCcCCcchhHHHHHHHh
Q psy17503 84 QIFRPDNFVFGQ-----SGAGNNWAKGHYTEGAELVDSVLDVVRKEAENCDCLQGFQLTHSLGGGTGSGMGTLLISKIRE 158 (277)
Q Consensus 84 ~lf~~~~~i~~~-----~~~~nnwa~G~~~~g~e~~~~~~d~iR~~~E~cD~lqgf~~~~s~~GGtGSGlgs~lle~l~d 158 (277)
+..+..|+ .|+|+||+.| ++..++..|.||+.++.|| +|+|+|+++||||||+++.++ ++..
T Consensus 62 ----~~ki~lG~~~t~GlGAG~np~vG-----~eaaee~~d~Ir~~le~~D---~ffItagmGGGTGSGaapvIa-eiak 128 (396)
T 4dxd_A 62 ----ESKIQIGEKLTRGLGAGANPEIG-----KKAAEESREQIEDAIQGAD---MVFVTSGMGGGTGTGAAPVVA-KIAK 128 (396)
T ss_dssp ----SEEEECCHHHHTTSCCTTCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHH-HHHH
T ss_pred ----ccEEEcCccccCCCCCCCChHHH-----HHHHHHHHHHHHHHHcCCC---EEEEEeccCCCccccHHHHHH-HHHH
Confidence 12233332 4899998755 6888999999999999999 499999999999999999765 4667
Q ss_pred hccccccceEEeeCCCCCCCceeeecccchhhhhh
Q psy17503 159 EFPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQL 193 (277)
Q Consensus 159 ey~~~~~~~~~v~p~~~~~~~~v~~yN~~ls~~~l 193 (277)
+|+ +.+++|+|.|+..+..++|||+.++++.|
T Consensus 129 e~g---~LtvsVVt~Pf~~Eg~~r~yNA~lgl~~L 160 (396)
T 4dxd_A 129 EMG---ALTVGVVTRPFSFEGRKRQTQAAAGVEAM 160 (396)
T ss_dssp HTT---CEEEEEEEECCGGGCHHHHHHHHHHHHHH
T ss_pred hcC---CceEEEEeCCccccchHHHHHHHHHHHHH
Confidence 786 57888998888778889999999999999
No 16
>4ei7_A Plasmid replication protein REPX; GTP hydrolase, plasmid segregation; HET: GDP; 1.90A {Bacillus cereus} PDB: 4ei8_A 4ei9_A*
Probab=98.28 E-value=3e-07 Score=85.24 Aligned_cols=162 Identities=22% Similarity=0.242 Sum_probs=100.0
Q ss_pred EEEEecCCchhHHHHHHHHHHHHhhCCCCCCCccCCCcccccccccccccccCCCccccceeeecCCCCcccccccCCCC
Q psy17503 4 IVHVQAGQCGNQIGAKFWEIISAEHGIDPTGAYHGDKDNQLERINVYYNEAQGRNVYVPRAILVDLEPGTMDATRSGPYG 83 (277)
Q Consensus 4 iItiq~Gq~GnqiG~~~W~~~~~e~~~~~~g~~~~~~~~~~~~~~~~F~e~~~~~~~~pRavlvDle~~~i~~i~~~~~~ 83 (277)
|..|-+||||+.|-+.|.+ +... ... ..+..++|.|+++...+..+...
T Consensus 18 i~vIGvGgaG~~ivd~~~~-----~~~~----------------------~~~-~~~~~~~iaiNTd~~~L~~~~~~--- 66 (389)
T 4ei7_A 18 FGFLGLGMGGCAIAAECAN-----KETQ----------------------IKN-NKYPYRAILVNTNSQDFNKIEIK--- 66 (389)
T ss_dssp EEEEEEHHHHHHHHHHHHT-----CCCC----------------------CTT-CSCCCEEEEEECCCHHHHHSCCC---
T ss_pred EEEEEECCchHHHHHHHHh-----cccc----------------------ccc-ccccccEEEEECCHHHHhhccCc---
Confidence 5679999999999988832 1110 001 23446789999888776554321
Q ss_pred CCCCCCCccc-cc-CCCccccCccccCcCcchhhhhHHHHHhhhhccCCCCCeeEEeeCCCCcCCcchhHHHHHHHhhcc
Q psy17503 84 QIFRPDNFVF-GQ-SGAGNNWAKGHYTEGAELVDSVLDVVRKEAENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFP 161 (277)
Q Consensus 84 ~lf~~~~~i~-~~-~~~~nnwa~G~~~~g~e~~~~~~d~iR~~~E~cD~lqgf~~~~s~~GGtGSGlgs~lle~l~dey~ 161 (277)
........++ +. .|+|.+|..|+ ....+..+.+.+.|+..++.+| -++++++++||||+|.++.+++.+++.
T Consensus 67 ~~~~~g~~~~~g~g~GaG~~p~~G~-~aa~e~~~~i~~~l~~~~~~~d---~vfi~ag~GGGTGtGa~pvia~~~ke~-- 140 (389)
T 4ei7_A 67 NTGNVRKIQLEGYEQGAARNPQVGE-EAFVKHETKIFEAVKQEFEDRD---FIWITCGLGGGTGTGALLKAIEMLYEH-- 140 (389)
T ss_dssp SCSSEEEEECTTCCCTTCCCHHHHH-HHHHHTHHHHHHHHHHHTTTCS---EEEEEEETTSSHHHHHHHHHHHHHHHT--
T ss_pred chhhhhhhccCCCCCCCCCChHHHH-HHHHHHHHHHHHHHHhhcCCcc---EEEEEecCCCCCccccHHHHHHHHHHc--
Confidence 1111111222 22 38899987774 2334556667777776666665 479999999999999999999988873
Q ss_pred ccccceEEeeCCCCCC-Cceeeecccchhhhhh----cccccccch
Q psy17503 162 DRIMNTYSVVPSPKVS-DTVVEPYNATLSVHQL----MSATFIGNS 202 (277)
Q Consensus 162 ~~~~~~~~v~p~~~~~-~~~v~~yN~~ls~~~l----~s~~~l~Ns 202 (277)
..+......+|+...+ ....++++.+..+... .+..++.|.
T Consensus 141 ~~~~~~vvt~Pf~~Eg~~~~~~A~~~i~~l~~~~~~vd~~ividN~ 186 (389)
T 4ei7_A 141 DYNFGLLLTLPRDAEALKVLENATSRIRSIAMNQEAFGSIVLIDNA 186 (389)
T ss_dssp TCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTGGGSSEEEEEEHH
T ss_pred CCCEEEEEEeCCCcCchHHHHHHHHHHHHHHHHhccCCeEEEeccH
Confidence 2345555677865432 3344555555555433 234455554
No 17
>2e4h_B Tubulin alpha-ubiquitous chain; cytoskeleton, CAP-Gly, complex structure, solution structure, CLIP, structural protein; NMR {Homo sapiens}
Probab=98.06 E-value=3.2e-06 Score=51.22 Aligned_cols=26 Identities=35% Similarity=0.525 Sum_probs=23.1
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhccc
Q psy17503 237 MEFTEAESNMIDLVSEYQQYQEATVE 262 (277)
Q Consensus 237 ~~f~ea~~~l~~l~~~Y~~~~~~~~~ 262 (277)
++|+||+++|++|+++|+++..++.+
T Consensus 1 ~EFsEA~edl~~L~~dYee~~~~~~e 26 (36)
T 2e4h_B 1 GEFSEAREDMAALEKDYEEVGVDSVE 26 (36)
T ss_pred CcchHHHHHHHHHHHHHHHHhccccc
Confidence 58999999999999999999877654
No 18
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A*
Probab=97.44 E-value=4.9e-05 Score=66.93 Aligned_cols=67 Identities=24% Similarity=0.361 Sum_probs=44.2
Q ss_pred CCCccccCccccCcCcchhhhhHHHHHhhhhccCCCCCeeEEeeCCCCcCCcchhHHHHHHHhhccccccceEEeeC
Q psy17503 96 SGAGNNWAKGHYTEGAELVDSVLDVVRKEAENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTYSVVP 172 (277)
Q Consensus 96 ~~~~nnwa~G~~~~g~e~~~~~~d~iR~~~E~cD~lqgf~~~~s~~GGtGSGlgs~lle~l~dey~~~~~~~~~v~p 172 (277)
.|+|.+ -..|.+..+.-.+.|++.++.+ +-+.++.+++||||+|.+..+++.+++.- ..+.++.+.|
T Consensus 54 lGAGgd-----pe~g~e~a~e~~~eI~~~l~~a---D~VFVtaGLGGGTGTGaAPVvAeiake~G--alvVavVt~~ 120 (315)
T 3r4v_A 54 RGAGGN-----RKVILPLVRPQIPALMDTIPEA---DFYIVCYSLGGGSGSVLGPLITGQLADRK--ASFVSFVVGA 120 (315)
T ss_dssp CC---C-----HHHHHHHHGGGHHHHHHTSCCB---SCEEEEEESSSSSHHHHHHHHHHHHHHTT--CCEEEEEEEC
T ss_pred CCCCCC-----hHHHHHHHHhhHHHHHHhcCCC---CEEEEEeccCCccccchHHHHHHHHHHcC--CCEEEEEecC
Confidence 355554 2344555555555666655543 34789999999999999999999999862 2455555655
No 19
>1pq1_B BCL2-like protein 11; BCL-XL/BIM, apoptosis; 1.65A {Mus musculus}
Probab=52.39 E-value=5.3 Score=22.60 Aligned_cols=27 Identities=33% Similarity=0.636 Sum_probs=22.9
Q ss_pred HHHHHHHhhhhhhhhhhcccccccccc
Q psy17503 203 TCIQDLFKRISDQFNAMFRRKAFLHWY 229 (277)
Q Consensus 203 tsI~~~~~~i~~~f~~m~~~~aflh~y 229 (277)
..|.+-+++|.+.|.+-|.||.|+..|
T Consensus 6 iwIAQELRRIGDeFNa~ypRR~~~~~~ 32 (33)
T 1pq1_B 6 IRIAQELRRIGDEFNETYTRRVFANDY 32 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhHHhhcccchHHHhhcC
Confidence 357788999999999999999888654
No 20
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=48.69 E-value=18 Score=27.71 Aligned_cols=30 Identities=13% Similarity=0.103 Sum_probs=24.8
Q ss_pred hhhhHHHHHhhhhccCCCCCeeEEeeCCCCc
Q psy17503 114 VDSVLDVVRKEAENCDCLQGFQLTHSLGGGT 144 (277)
Q Consensus 114 ~~~~~d~iR~~~E~cD~lqgf~~~~s~~GGt 144 (277)
.+.+.++++..+++.|. .|+.++.++-|||
T Consensus 45 ~~~~~~~i~~~i~~~~~-~gvliLtDl~GGS 74 (142)
T 3bed_A 45 LSGTQAKLAAILKEAGN-VPTLVLADLXGGT 74 (142)
T ss_dssp HHHHHHHHHHHHHHHCS-CCEEEEESSTTSH
T ss_pred HHHHHHHHHHHHHhcCC-CCEEEEEECCCCH
Confidence 34567778888888888 9999999998876
No 21
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=41.37 E-value=40 Score=25.41 Aligned_cols=31 Identities=13% Similarity=0.288 Sum_probs=25.1
Q ss_pred hhhhHHHHHhhhhccCCCCCeeEEeeCCCCc
Q psy17503 114 VDSVLDVVRKEAENCDCLQGFQLTHSLGGGT 144 (277)
Q Consensus 114 ~~~~~d~iR~~~E~cD~lqgf~~~~s~~GGt 144 (277)
.+.+.++++..+++.|.=.|+.++.++-|||
T Consensus 41 ~~~~~~~i~~~i~~~~~~~gvliLtDl~GGS 71 (135)
T 1pdo_A 41 AETLIEKYNAQLAKLDTTKGVLFLVDTWGGS 71 (135)
T ss_dssp HHHHHHHHHHHHTTSCCTTCEEEEESSTTSH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEECCCCC
Confidence 3456777788888888778999999998876
No 22
>2wh6_B BCL-2-like protein 11; mitochondrion, early protein, transmembrane, viral protein,; 1.50A {Homo sapiens} PDB: 2v6q_B 2nl9_B 3fdl_B 3io8_B 2vm6_B 3io9_B 3d7v_B 3kj1_B 3kz0_C 3kj2_B
Probab=36.24 E-value=18 Score=19.28 Aligned_cols=20 Identities=40% Similarity=0.766 Sum_probs=13.7
Q ss_pred HHHHHHhhhhhhhhhhcccc
Q psy17503 204 CIQDLFKRISDQFNAMFRRK 223 (277)
Q Consensus 204 sI~~~~~~i~~~f~~m~~~~ 223 (277)
.|.+-+++|.+.|+..|.||
T Consensus 7 ~iAqELRRIGDeFN~~y~rr 26 (26)
T 2wh6_B 7 WIAQELRRIGDEFNAYYARR 26 (26)
T ss_dssp HHHHHHHHHHHHHTTC----
T ss_pred HHHHHHHHHhHHHhhhccCC
Confidence 46677899999999988875
No 23
>3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum}
Probab=34.43 E-value=14 Score=31.45 Aligned_cols=62 Identities=16% Similarity=0.314 Sum_probs=38.3
Q ss_pred cchhhhhHHHHHhhhhccCCCCCeeEEeeCCCCcCCcchhHHHHHHHhhccccccceEEeeCCCCCC
Q psy17503 111 AELVDSVLDVVRKEAENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTYSVVPSPKVS 177 (277)
Q Consensus 111 ~e~~~~~~d~iR~~~E~cD~lqgf~~~~s~~GGtGSGlgs~lle~l~dey~~~~~~~~~v~p~~~~~ 177 (277)
..+.+.+.+.|++.+++.....=+..=||+|| ++++++.-.|+..+|.+.+.+ ..|..|.++
T Consensus 104 ~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGG----alA~l~a~~l~~~~~~~~v~~-~tFg~PrvG 165 (258)
T 3g7n_A 104 SAVHDTIITEVKALIAKYPDYTLEAVGHSLGG----ALTSIAHVALAQNFPDKSLVS-NALNAFPIG 165 (258)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCEEEEEEETHHH----HHHHHHHHHHHHHCTTSCEEE-EEESCCCCB
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEeccCHHH----HHHHHHHHHHHHhCCCCceeE-EEecCCCCC
Confidence 34556677777777766544444555678854 467777777888888655433 345555544
No 24
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=29.32 E-value=66 Score=24.77 Aligned_cols=31 Identities=16% Similarity=0.171 Sum_probs=24.7
Q ss_pred hhhhHHHHHhhhhccCCCCCeeEEeeCCCCc
Q psy17503 114 VDSVLDVVRKEAENCDCLQGFQLTHSLGGGT 144 (277)
Q Consensus 114 ~~~~~d~iR~~~E~cD~lqgf~~~~s~~GGt 144 (277)
.+.+.++++..+++.|.=.|+.++.++-|||
T Consensus 41 ~~~~~~~i~~~i~~~~~~~gvlvLtDl~GGS 71 (150)
T 3ipr_A 41 VQALGGQIKTAIENVQQGDGVLVMVDLLSAS 71 (150)
T ss_dssp HHHHHHHHHHHHHHHCSSSCEEEEESSTTSH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeCCCCC
Confidence 3456677777777778888999999999887
No 25
>3mtq_A Putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease...; PTS system fructose IIA component; 1.70A {Klebsiella pneumoniae subsp}
Probab=26.94 E-value=37 Score=26.70 Aligned_cols=30 Identities=7% Similarity=0.044 Sum_probs=25.4
Q ss_pred hhhHHHHHhhhhccCCCCCeeEEeeCCCCc
Q psy17503 115 DSVLDVVRKEAENCDCLQGFQLTHSLGGGT 144 (277)
Q Consensus 115 ~~~~d~iR~~~E~cD~lqgf~~~~s~~GGt 144 (277)
+.+.++++..+++.|.=.|+.++.++-|||
T Consensus 61 ~~~~~~~~~~i~~~~~~~gVLiLtDl~GGS 90 (159)
T 3mtq_A 61 VDLTQQVEALVARFPAQDELIVITDIFAGS 90 (159)
T ss_dssp SCHHHHHHHHHHTSCTTSEEEEEESCTTSH
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEeCCCCC
Confidence 456777888888888889999999999987
No 26
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=26.54 E-value=37 Score=26.14 Aligned_cols=30 Identities=20% Similarity=0.144 Sum_probs=23.7
Q ss_pred hhhHHHHHhhhhcc-CCCCCeeEEeeCCCCc
Q psy17503 115 DSVLDVVRKEAENC-DCLQGFQLTHSLGGGT 144 (277)
Q Consensus 115 ~~~~d~iR~~~E~c-D~lqgf~~~~s~~GGt 144 (277)
+.+.++++..+++. |.=.|+.++.++.|||
T Consensus 44 ~~~~~~i~~~i~~~~~~~~gvliLtDl~GGS 74 (144)
T 3lfh_A 44 EVVRKEVEKIIKEKLQEDKEIIIVVDLFGGS 74 (144)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEESSSSSH
T ss_pred HHHHHHHHHHHHHhhCCCCcEEEEEeCCCCC
Confidence 45666677777777 7778999999999887
No 27
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=22.78 E-value=91 Score=23.37 Aligned_cols=27 Identities=7% Similarity=0.287 Sum_probs=23.3
Q ss_pred hhhhHHHHHhhhhccCCCCCeeEEeeC
Q psy17503 114 VDSVLDVVRKEAENCDCLQGFQLTHSL 140 (277)
Q Consensus 114 ~~~~~d~iR~~~E~cD~lqgf~~~~s~ 140 (277)
.+.+.++++..+++.|.=+|+.++.++
T Consensus 44 ~~~~~~~i~~~i~~~d~~~GVLiL~Dm 70 (130)
T 3gx1_A 44 VKAMYEKLKQTVVKLNPVKGVLILSDM 70 (130)
T ss_dssp HHHHHHHHHHHHHTSCCTTCEEEEECS
T ss_pred HHHHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 456778888888888988999999999
No 28
>2plg_A TLL0839 protein; hypothetical, uncharacterized, DUF1821, NYSGXRC, PSI-2, structural genomics, protein structure initiative; 2.60A {Synechococcus elongatus} SCOP: d.198.1.2
Probab=22.55 E-value=59 Score=25.80 Aligned_cols=38 Identities=16% Similarity=0.153 Sum_probs=30.2
Q ss_pred cccccCCCCCccchhHHHHHHHHHHHHHHHHhhhcccc
Q psy17503 226 LHWYTGEGMDEMEFTEAESNMIDLVSEYQQYQEATVEE 263 (277)
Q Consensus 226 lh~y~~egm~~~~f~ea~~~l~~l~~~Y~~~~~~~~~~ 263 (277)
++...-.+++.+||..|...|..+.++|.+.....+..
T Consensus 118 v~~r~ls~Ld~~E~~~aIt~V~~lAD~~Dd~L~~~fg~ 155 (163)
T 2plg_A 118 VASRTLGGITAGEISRLITIVATLADDYDDALRAEFKG 155 (163)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred EEEEEcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 34445579999999999999999999999876655443
No 29
>3ct6_A PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DHAM; mixed alpha beta structure, glycerol metabolism; 1.10A {Lactococcus lactis} SCOP: c.54.1.2 PDB: 3cr3_C*
Probab=22.28 E-value=39 Score=25.58 Aligned_cols=28 Identities=18% Similarity=0.277 Sum_probs=20.1
Q ss_pred hhhHHHHHhhhhccCCCCCeeEEeeCCCCc
Q psy17503 115 DSVLDVVRKEAENCDCLQGFQLTHSLGGGT 144 (277)
Q Consensus 115 ~~~~d~iR~~~E~cD~lqgf~~~~s~~GGt 144 (277)
+...++|+..+++.|. +|+.++.++ ||+
T Consensus 43 ~~~~~~i~~ai~~~~~-dgVlvltDL-Ggs 70 (131)
T 3ct6_A 43 GTSFDRVMNAIEENEA-DNLLTFFDL-GSA 70 (131)
T ss_dssp SCCHHHHHHHHHHSSC-SEEEEEESS-GGG
T ss_pred HHHHHHHHHHHHhCCC-CCEEEEEeC-CCC
Confidence 3455666666777773 899999999 654
No 30
>2ful_A EIF-5, eukaryotic translation initiation factor 5; atypical heat motif; 1.50A {Saccharomyces cerevisiae}
Probab=21.29 E-value=29 Score=27.87 Aligned_cols=32 Identities=3% Similarity=0.040 Sum_probs=17.0
Q ss_pred hcccccccccccCC---CCCccchhHHHHHHHHHH
Q psy17503 219 MFRRKAFLHWYTGE---GMDEMEFTEAESNMIDLV 250 (277)
Q Consensus 219 m~~~~aflh~y~~e---gm~~~~f~ea~~~l~~l~ 250 (277)
+..-.|++.||.+. ..+......++..+..++
T Consensus 120 IleEeaIl~W~~~~skk~v~~e~~~~v~~~~~pFI 154 (177)
T 2ful_A 120 IISEEEIMRFGTKSSKKFVPKEVSKKVRRAAKPFI 154 (177)
T ss_dssp SSCHHHHHHHHHCCCSSSSCHHHHHHHHHTTHHHH
T ss_pred hhhhHHHHHHHhcCCcccCChHHHHHHHHHHHHHH
Confidence 34457999999753 123333334444444444
No 31
>3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A*
Probab=20.17 E-value=40 Score=28.92 Aligned_cols=61 Identities=21% Similarity=0.329 Sum_probs=35.7
Q ss_pred chhhhhHHHHHhhhhccCCCCCeeEEeeCCCCcCCcchhHHHHHHHhhccccccceEEeeCCCCCC
Q psy17503 112 ELVDSVLDVVRKEAENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTYSVVPSPKVS 177 (277)
Q Consensus 112 e~~~~~~d~iR~~~E~cD~lqgf~~~~s~~GGtGSGlgs~lle~l~dey~~~~~~~~~v~p~~~~~ 177 (277)
.+.+.+.+.|++.+++.....=+..=||+|| ++++++.-.|+..+|...+. +..|-.|.++
T Consensus 119 ~~~~~~~~~l~~~~~~~p~~~l~vtGHSLGG----alA~l~a~~l~~~~~~~~~~-~~tfg~PrvG 179 (279)
T 3uue_A 119 DLMDDIFTAVKKYKKEKNEKRVTVIGHSLGA----AMGLLCAMDIELRMDGGLYK-TYLFGLPRLG 179 (279)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCEEEEEETHHH----HHHHHHHHHHHHHSTTCCSE-EEEESCCCCB
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEcccCHHH----HHHHHHHHHHHHhCCCCceE-EEEecCCCcC
Confidence 4455666667766666544444555578754 46777777777777654333 3344455443
Done!